Query 010976
Match_columns 496
No_of_seqs 581 out of 3188
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 18:13:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010976.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010976hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vtx_A MAMA; tetratricopeptide 99.9 1.5E-22 5E-27 183.7 23.7 167 129-349 12-178 (184)
2 2pl2_A Hypothetical conserved 99.9 1.1E-22 3.9E-27 190.7 22.3 170 130-354 13-193 (217)
3 2pl2_A Hypothetical conserved 99.9 2.8E-22 9.6E-27 188.1 21.6 177 108-339 15-212 (217)
4 2h6f_A Protein farnesyltransfe 99.9 3.8E-22 1.3E-26 203.6 23.1 192 108-347 107-310 (382)
5 2h6f_A Protein farnesyltransfe 99.9 4.7E-22 1.6E-26 202.9 22.7 174 132-353 107-281 (382)
6 4gyw_A UDP-N-acetylglucosamine 99.9 5.5E-22 1.9E-26 217.8 20.5 162 129-344 16-177 (723)
7 4i17_A Hypothetical protein; T 99.9 3.4E-21 1.2E-25 180.9 21.5 194 129-357 14-225 (228)
8 1w3b_A UDP-N-acetylglucosamine 99.9 3.3E-20 1.1E-24 188.2 24.2 164 110-308 147-320 (388)
9 3hym_B Cell division cycle pro 99.9 9.4E-20 3.2E-24 179.0 25.4 202 108-353 66-311 (330)
10 1w3b_A UDP-N-acetylglucosamine 99.9 9.1E-20 3.1E-24 184.9 25.0 197 108-348 77-307 (388)
11 2q7f_A YRRB protein; TPR, prot 99.9 6.4E-20 2.2E-24 172.5 22.0 196 108-357 33-238 (243)
12 4ga2_A E3 SUMO-protein ligase 99.8 4.4E-21 1.5E-25 169.3 12.6 142 132-308 7-149 (150)
13 4abn_A Tetratricopeptide repea 99.8 5.1E-20 1.7E-24 193.4 21.2 192 111-350 81-296 (474)
14 3uq3_A Heat shock protein STI1 99.8 1.6E-19 5.6E-24 170.8 22.3 192 108-353 15-254 (258)
15 1fch_A Peroxisomal targeting s 99.8 4.2E-19 1.4E-23 177.7 25.2 193 110-349 37-288 (368)
16 3urz_A Uncharacterized protein 99.8 6E-20 2.1E-24 170.9 17.6 165 131-348 13-193 (208)
17 4gyw_A UDP-N-acetylglucosamine 99.8 6.7E-20 2.3E-24 201.2 20.2 146 151-350 4-149 (723)
18 4eqf_A PEX5-related protein; a 99.8 8.9E-20 3E-24 183.2 19.3 188 107-348 74-283 (365)
19 3ieg_A DNAJ homolog subfamily 99.8 1.9E-18 6.4E-23 171.3 27.7 208 105-356 78-350 (359)
20 4gco_A Protein STI-1; structur 99.8 9.1E-20 3.1E-24 156.1 14.4 122 147-303 4-125 (126)
21 1fch_A Peroxisomal targeting s 99.8 2E-18 6.8E-23 172.8 25.4 199 107-345 73-318 (368)
22 2ho1_A Type 4 fimbrial biogene 99.8 1.6E-18 5.5E-23 164.4 22.9 190 109-352 48-249 (252)
23 4eqf_A PEX5-related protein; a 99.8 1.1E-19 3.8E-24 182.5 15.7 188 104-345 105-314 (365)
24 3u4t_A TPR repeat-containing p 99.8 8.3E-19 2.8E-23 168.1 20.2 197 107-357 46-266 (272)
25 2vq2_A PILW, putative fimbrial 99.8 5E-18 1.7E-22 157.0 24.6 191 108-352 18-222 (225)
26 3uq3_A Heat shock protein STI1 99.8 1.7E-18 5.8E-23 163.8 21.1 174 129-350 12-211 (258)
27 2pzi_A Probable serine/threoni 99.8 4.1E-19 1.4E-23 194.8 17.9 167 133-354 402-576 (681)
28 3cv0_A Peroxisome targeting si 99.8 1.5E-17 5E-22 163.0 27.3 197 108-344 31-272 (327)
29 3vtx_A MAMA; tetratricopeptide 99.8 2.2E-18 7.6E-23 155.9 19.7 157 107-300 14-180 (184)
30 3ieg_A DNAJ homolog subfamily 99.8 6.7E-18 2.3E-22 167.3 24.6 187 108-348 13-224 (359)
31 3fp2_A TPR repeat-containing p 99.8 5.3E-18 1.8E-22 178.6 24.7 202 107-352 252-502 (537)
32 2vq2_A PILW, putative fimbrial 99.8 7.7E-18 2.6E-22 155.8 22.6 167 130-350 16-186 (225)
33 3as5_A MAMA; tetratricopeptide 99.8 2.8E-18 9.4E-23 153.5 18.7 162 131-346 17-178 (186)
34 4abn_A Tetratricopeptide repea 99.8 8.4E-19 2.9E-23 184.1 16.7 172 105-308 109-307 (474)
35 4i17_A Hypothetical protein; T 99.8 4.4E-18 1.5E-22 159.6 19.9 172 108-304 17-225 (228)
36 2y4t_A DNAJ homolog subfamily 99.8 1.1E-17 3.8E-22 172.2 24.2 194 108-355 153-372 (450)
37 2xpi_A Anaphase-promoting comp 99.8 1.1E-17 3.9E-22 178.8 25.1 192 108-353 383-591 (597)
38 2pzi_A Probable serine/threoni 99.8 1.1E-18 3.6E-23 191.5 16.9 163 110-308 403-583 (681)
39 2q7f_A YRRB protein; TPR, prot 99.8 5.5E-18 1.9E-22 159.2 19.4 165 131-349 32-196 (243)
40 2ho1_A Type 4 fimbrial biogene 99.8 1.4E-17 4.8E-22 157.8 22.3 166 131-350 46-213 (252)
41 2y4t_A DNAJ homolog subfamily 99.8 1.8E-17 6.1E-22 170.7 24.4 188 108-349 36-248 (450)
42 4ga2_A E3 SUMO-protein ligase 99.8 2.3E-19 7.9E-24 158.2 8.7 136 162-351 3-139 (150)
43 3cv0_A Peroxisome targeting si 99.8 5.5E-17 1.9E-21 158.9 26.0 173 131-350 30-244 (327)
44 3mkr_A Coatomer subunit epsilo 99.8 1.7E-17 5.8E-22 162.9 22.1 184 110-350 77-273 (291)
45 1xnf_A Lipoprotein NLPI; TPR, 99.8 7E-17 2.4E-21 154.5 25.5 193 109-346 16-249 (275)
46 3qky_A Outer membrane assembly 99.8 1.1E-17 3.7E-22 160.5 19.1 187 131-357 24-240 (261)
47 3u4t_A TPR repeat-containing p 99.8 8.3E-18 2.8E-22 161.1 17.7 160 131-346 12-176 (272)
48 1qqe_A Vesicular transport pro 99.8 7.6E-18 2.6E-22 165.1 17.0 178 112-347 31-234 (292)
49 3gyz_A Chaperone protein IPGC; 99.8 1.7E-18 5.8E-23 153.1 10.6 123 136-293 16-138 (151)
50 3hym_B Cell division cycle pro 99.8 4.4E-17 1.5E-21 159.9 21.6 183 108-344 32-225 (330)
51 2vsy_A XCC0866; transferase, g 99.8 1.7E-17 5.8E-22 177.8 20.1 157 135-345 2-161 (568)
52 2xpi_A Anaphase-promoting comp 99.8 1.1E-16 3.7E-21 171.2 25.6 165 134-352 385-556 (597)
53 3gyz_A Chaperone protein IPGC; 99.8 2.6E-18 8.7E-23 152.0 10.6 128 186-353 18-145 (151)
54 4gco_A Protein STI-1; structur 99.7 1.6E-17 5.6E-22 141.9 14.0 120 195-354 4-123 (126)
55 4g1t_A Interferon-induced prot 99.7 1.1E-16 3.9E-21 166.1 23.2 202 105-351 58-286 (472)
56 4g1t_A Interferon-induced prot 99.7 4.3E-17 1.5E-21 169.2 18.0 213 106-346 102-334 (472)
57 2gw1_A Mitochondrial precursor 99.7 2.5E-17 8.6E-22 172.0 16.2 167 134-354 316-491 (514)
58 2r5s_A Uncharacterized protein 99.7 1.5E-17 5E-22 150.2 12.1 155 132-340 16-172 (176)
59 2yhc_A BAMD, UPF0169 lipoprote 99.7 1.5E-16 5.3E-21 149.4 19.5 168 131-345 13-217 (225)
60 2vgx_A Chaperone SYCD; alterna 99.7 1.4E-17 4.9E-22 146.4 11.2 128 141-303 6-133 (148)
61 3fp2_A TPR repeat-containing p 99.7 9.2E-17 3.1E-21 169.1 19.3 180 111-345 215-411 (537)
62 1p5q_A FKBP52, FK506-binding p 99.7 1.8E-17 6.1E-22 166.1 11.5 140 134-308 125-279 (336)
63 3qou_A Protein YBBN; thioredox 99.7 7.4E-17 2.5E-21 157.8 15.4 143 131-308 126-270 (287)
64 1qqe_A Vesicular transport pro 99.7 8.7E-17 3E-21 157.5 15.5 186 107-346 46-274 (292)
65 3qky_A Outer membrane assembly 99.7 3.8E-16 1.3E-20 149.7 19.7 178 108-310 25-249 (261)
66 3urz_A Uncharacterized protein 99.7 3.3E-16 1.1E-20 145.5 17.4 119 155-308 3-137 (208)
67 2gw1_A Mitochondrial precursor 99.7 1.3E-16 4.5E-21 166.6 15.9 190 107-350 246-453 (514)
68 3mkr_A Coatomer subunit epsilo 99.7 2.4E-15 8.2E-20 147.5 23.3 165 130-353 73-241 (291)
69 2xcb_A PCRH, regulatory protei 99.7 8E-17 2.7E-21 140.1 11.1 130 143-307 5-134 (142)
70 1xnf_A Lipoprotein NLPI; TPR, 99.7 4.9E-16 1.7E-20 148.5 17.7 159 133-346 16-178 (275)
71 2ond_A Cleavage stimulation fa 99.7 2.2E-15 7.4E-20 148.6 22.3 150 138-341 80-232 (308)
72 2hr2_A Hypothetical protein; a 99.7 1.2E-16 4.1E-21 140.9 10.9 124 156-307 11-150 (159)
73 3as5_A MAMA; tetratricopeptide 99.7 2.5E-15 8.4E-20 134.1 19.4 152 108-294 18-179 (186)
74 3upv_A Heat shock protein STI1 99.7 9.4E-16 3.2E-20 129.8 15.6 119 153-306 1-125 (126)
75 3nf1_A KLC 1, kinesin light ch 99.7 3.2E-16 1.1E-20 152.3 14.3 190 108-344 37-310 (311)
76 3edt_B KLC 2, kinesin light ch 99.7 6.7E-16 2.3E-20 147.5 16.1 167 129-342 50-282 (283)
77 2vgx_A Chaperone SYCD; alterna 99.7 7.1E-17 2.4E-21 142.0 8.5 123 186-348 3-125 (148)
78 3dra_A Protein farnesyltransfe 99.7 6.3E-15 2.1E-19 145.2 23.3 186 111-347 29-221 (306)
79 2ond_A Cleavage stimulation fa 99.7 3.7E-15 1.3E-19 146.9 21.2 182 112-346 78-275 (308)
80 2vsy_A XCC0866; transferase, g 99.7 1.3E-15 4.3E-20 163.2 17.4 154 112-300 3-169 (568)
81 2e2e_A Formate-dependent nitri 99.7 7.6E-16 2.6E-20 138.4 13.3 132 132-298 20-154 (177)
82 3sz7_A HSC70 cochaperone (SGT) 99.7 2.6E-15 9E-20 133.5 16.2 121 152-307 7-127 (164)
83 2fo7_A Synthetic consensus TPR 99.6 1.4E-14 4.8E-19 121.8 18.9 134 157-344 2-135 (136)
84 1ouv_A Conserved hypothetical 99.6 5.3E-14 1.8E-18 135.3 24.5 182 109-348 17-222 (273)
85 3q7a_A Farnesyltransferase alp 99.6 2.6E-14 8.8E-19 142.5 22.5 193 110-348 49-244 (349)
86 1ouv_A Conserved hypothetical 99.6 2.2E-14 7.5E-19 138.0 21.3 181 111-349 55-259 (273)
87 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 3.3E-16 1.1E-20 163.6 8.8 139 135-308 247-400 (457)
88 2lni_A Stress-induced-phosphop 99.6 4.6E-15 1.6E-19 125.4 14.0 122 152-308 12-133 (133)
89 4a1s_A PINS, partner of inscut 99.6 7.7E-16 2.6E-20 156.6 10.7 189 108-343 58-294 (411)
90 2xcb_A PCRH, regulatory protei 99.6 9.7E-16 3.3E-20 133.1 9.5 121 190-350 4-124 (142)
91 1hh8_A P67PHOX, NCF-2, neutrop 99.6 1.8E-14 6.1E-19 132.9 18.5 145 156-357 6-168 (213)
92 2fo7_A Synthetic consensus TPR 99.6 2.9E-14 1E-18 119.8 18.1 128 130-292 9-136 (136)
93 3edt_B KLC 2, kinesin light ch 99.6 1.3E-15 4.4E-20 145.5 10.6 163 134-343 13-200 (283)
94 1zu2_A Mitochondrial import re 99.6 4E-15 1.4E-19 130.9 12.9 119 179-301 11-133 (158)
95 3qou_A Protein YBBN; thioredox 99.6 1.6E-14 5.3E-19 141.2 18.6 141 151-345 112-252 (287)
96 2vyi_A SGTA protein; chaperone 99.6 1.2E-14 4.2E-19 121.9 15.3 124 150-308 6-129 (131)
97 1dce_A Protein (RAB geranylger 99.6 3.7E-14 1.3E-18 151.8 22.8 186 137-352 44-232 (567)
98 3dss_A Geranylgeranyl transfer 99.6 1.2E-13 4E-18 137.1 24.5 199 115-347 47-273 (331)
99 1a17_A Serine/threonine protei 99.6 4.2E-14 1.4E-18 124.4 19.2 130 156-339 13-144 (166)
100 3ro2_A PINS homolog, G-protein 99.6 3.3E-15 1.1E-19 145.9 12.8 200 108-344 15-295 (338)
101 3sf4_A G-protein-signaling mod 99.6 2.7E-15 9.2E-20 151.5 12.3 189 108-343 19-258 (406)
102 3dra_A Protein farnesyltransfe 99.6 3.2E-14 1.1E-18 140.1 19.5 208 115-351 50-298 (306)
103 1zu2_A Mitochondrial import re 99.6 8.8E-15 3E-19 128.7 13.7 114 133-250 13-126 (158)
104 1hh8_A P67PHOX, NCF-2, neutrop 99.6 1.8E-14 6.3E-19 132.8 16.6 133 131-301 15-163 (213)
105 4gcn_A Protein STI-1; structur 99.6 1.6E-14 5.4E-19 123.3 14.9 111 154-300 6-123 (127)
106 2ifu_A Gamma-SNAP; membrane fu 99.6 8.7E-15 3E-19 144.3 15.2 182 111-346 29-228 (307)
107 3ulq_A Response regulator aspa 99.6 6.2E-15 2.1E-19 149.3 14.5 167 129-343 110-295 (383)
108 2fbn_A 70 kDa peptidylprolyl i 99.6 2.7E-15 9.2E-20 137.7 10.4 142 133-309 15-172 (198)
109 1na0_A Designed protein CTPR3; 99.6 6E-14 2.1E-18 116.5 17.8 122 151-307 3-125 (125)
110 3q49_B STIP1 homology and U bo 99.6 2.9E-14 9.9E-19 121.8 16.0 124 150-308 3-131 (137)
111 3ulq_A Response regulator aspa 99.6 1.1E-14 3.7E-19 147.6 15.3 174 105-308 110-318 (383)
112 3nf1_A KLC 1, kinesin light ch 99.6 1.7E-14 5.9E-19 140.0 15.9 168 130-344 35-227 (311)
113 2r5s_A Uncharacterized protein 99.6 9E-15 3.1E-19 131.7 12.4 139 152-345 2-141 (176)
114 3dss_A Geranylgeranyl transfer 99.6 3E-13 1E-17 134.1 23.9 184 135-348 42-229 (331)
115 3sf4_A G-protein-signaling mod 99.6 1.3E-14 4.3E-19 146.5 14.3 189 107-343 96-338 (406)
116 3u3w_A Transcriptional activat 99.6 2.1E-14 7.3E-19 140.3 15.2 164 132-341 85-266 (293)
117 3rkv_A Putative peptidylprolyl 99.6 2.4E-14 8.4E-19 126.8 14.2 119 155-308 10-147 (162)
118 2yhc_A BAMD, UPF0169 lipoprote 99.6 6.8E-14 2.3E-18 131.3 17.6 165 108-293 14-218 (225)
119 3upv_A Heat shock protein STI1 99.6 4.3E-14 1.5E-18 119.5 14.6 115 201-355 1-121 (126)
120 1hxi_A PEX5, peroxisome target 99.6 2.5E-14 8.4E-19 121.1 12.8 102 158-294 19-120 (121)
121 1a17_A Serine/threonine protei 99.6 1.3E-13 4.3E-18 121.3 17.5 124 130-288 21-146 (166)
122 2e2e_A Formate-dependent nitri 99.6 4.5E-14 1.5E-18 126.7 14.7 130 180-347 20-150 (177)
123 1elw_A TPR1-domain of HOP; HOP 99.6 1.4E-13 4.7E-18 113.3 16.4 115 155-304 3-117 (118)
124 1p5q_A FKBP52, FK506-binding p 99.6 1.4E-13 4.7E-18 137.7 19.4 125 129-288 154-294 (336)
125 3q15_A PSP28, response regulat 99.6 3.7E-14 1.3E-18 143.6 15.1 167 130-344 109-293 (378)
126 4a1s_A PINS, partner of inscut 99.5 2.2E-14 7.4E-19 145.8 12.9 175 129-344 55-255 (411)
127 2c2l_A CHIP, carboxy terminus 99.5 2.1E-14 7.3E-19 139.9 12.2 106 153-293 1-106 (281)
128 2qfc_A PLCR protein; TPR, HTH, 99.5 2.3E-13 7.7E-18 132.9 19.3 160 131-341 84-266 (293)
129 3ro2_A PINS homolog, G-protein 99.5 3.3E-14 1.1E-18 138.7 13.3 191 107-345 92-336 (338)
130 3rjv_A Putative SEL1 repeat pr 99.5 1.1E-13 3.6E-18 129.0 15.9 166 131-346 27-202 (212)
131 4gcn_A Protein STI-1; structur 99.5 1.2E-13 3.9E-18 117.9 14.6 107 203-349 7-120 (127)
132 2dba_A Smooth muscle cell asso 99.5 1.6E-13 5.6E-18 118.1 15.6 120 151-305 23-145 (148)
133 1dce_A Protein (RAB geranylger 99.5 1.5E-13 5.1E-18 147.1 18.0 169 115-308 46-241 (567)
134 4f3v_A ESX-1 secretion system 99.5 2E-14 6.7E-19 139.0 10.0 172 134-353 18-248 (282)
135 3sz7_A HSC70 cochaperone (SGT) 99.5 9.4E-14 3.2E-18 123.3 13.7 105 131-260 20-124 (164)
136 2c2l_A CHIP, carboxy terminus 99.5 1.3E-13 4.5E-18 134.3 15.4 152 130-306 12-182 (281)
137 3q15_A PSP28, response regulat 99.5 2.1E-13 7.1E-18 138.0 16.7 171 108-308 111-315 (378)
138 2vyi_A SGTA protein; chaperone 99.5 6.1E-13 2.1E-17 111.3 16.5 110 131-265 21-130 (131)
139 2hr2_A Hypothetical protein; a 99.5 7.6E-14 2.6E-18 122.9 11.1 103 204-346 11-136 (159)
140 2ooe_A Cleavage stimulation fa 99.5 7.9E-13 2.7E-17 140.1 19.7 156 135-344 292-457 (530)
141 1hxi_A PEX5, peroxisome target 99.5 3.4E-13 1.2E-17 114.0 13.5 101 206-346 19-119 (121)
142 2lni_A Stress-induced-phosphop 99.5 2.5E-13 8.7E-18 114.5 12.8 109 131-264 25-133 (133)
143 1elr_A TPR2A-domain of HOP; HO 99.5 4.8E-13 1.6E-17 112.2 13.9 119 154-308 2-127 (131)
144 2ifu_A Gamma-SNAP; membrane fu 99.5 1.1E-13 3.9E-18 136.2 11.7 171 111-345 4-188 (307)
145 2kck_A TPR repeat; tetratricop 99.5 2.1E-13 7E-18 111.2 11.3 107 151-292 1-110 (112)
146 3rkv_A Putative peptidylprolyl 99.5 2.4E-13 8.2E-18 120.4 12.2 112 129-265 18-148 (162)
147 1wao_1 Serine/threonine protei 99.5 1.2E-14 4.2E-19 152.5 4.2 122 156-312 6-129 (477)
148 3q49_B STIP1 homology and U bo 99.5 6.8E-13 2.3E-17 113.2 14.3 107 198-344 3-109 (137)
149 2if4_A ATFKBP42; FKBP-like, al 99.5 2E-14 6.8E-19 144.0 5.3 148 146-346 169-333 (338)
150 1wao_1 Serine/threonine protei 99.5 7E-14 2.4E-18 146.7 9.6 132 129-295 13-157 (477)
151 3q7a_A Farnesyltransferase alp 99.5 9.9E-13 3.4E-17 131.0 17.2 175 114-309 70-258 (349)
152 2fbn_A 70 kDa peptidylprolyl i 99.5 5.8E-13 2E-17 122.0 14.3 112 129-265 45-172 (198)
153 2xev_A YBGF; tetratricopeptide 99.5 1.4E-12 4.7E-17 110.0 15.3 116 157-307 3-124 (129)
154 3gw4_A Uncharacterized protein 99.5 5.1E-13 1.7E-17 121.6 12.9 162 133-342 3-177 (203)
155 3rjv_A Putative SEL1 repeat pr 99.4 9.5E-13 3.2E-17 122.5 14.5 143 139-341 3-158 (212)
156 2ooe_A Cleavage stimulation fa 99.4 2.3E-12 7.8E-17 136.5 18.9 161 139-353 255-432 (530)
157 1na0_A Designed protein CTPR3; 99.4 4E-12 1.4E-16 105.3 16.4 109 130-263 17-125 (125)
158 2xm6_A Protein corresponding t 99.4 8.3E-12 2.9E-16 130.9 22.7 151 135-344 272-435 (490)
159 1elw_A TPR1-domain of HOP; HOP 99.4 4.2E-12 1.4E-16 104.2 16.2 104 131-259 13-116 (118)
160 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 1.9E-12 6.5E-17 135.0 16.8 112 129-265 275-401 (457)
161 1ihg_A Cyclophilin 40; ppiase 99.4 1.3E-12 4.4E-17 132.5 15.0 120 156-310 223-358 (370)
162 2if4_A ATFKBP42; FKBP-like, al 99.4 1.4E-13 4.7E-18 137.9 7.7 131 129-294 186-334 (338)
163 3k9i_A BH0479 protein; putativ 99.4 3.8E-13 1.3E-17 112.5 8.5 106 135-265 3-111 (117)
164 3k9i_A BH0479 protein; putativ 99.4 5.4E-13 1.8E-17 111.6 8.4 103 184-307 4-109 (117)
165 2qfc_A PLCR protein; TPR, HTH, 99.4 1.8E-11 6.3E-16 119.3 20.4 152 109-289 86-267 (293)
166 2dba_A Smooth muscle cell asso 99.4 7E-12 2.4E-16 107.7 15.1 119 198-356 22-143 (148)
167 2kck_A TPR repeat; tetratricop 99.4 1.9E-12 6.4E-17 105.4 10.5 107 199-345 1-110 (112)
168 2xm6_A Protein corresponding t 99.4 7.2E-11 2.5E-15 123.7 24.5 153 135-346 236-401 (490)
169 2xev_A YBGF; tetratricopeptide 99.4 2E-11 6.7E-16 102.8 15.7 110 130-264 10-125 (129)
170 1hz4_A MALT regulatory protein 99.4 1.6E-11 5.4E-16 123.4 17.6 164 131-341 23-203 (373)
171 3e4b_A ALGK; tetratricopeptide 99.4 3.4E-11 1.2E-15 125.3 20.4 158 132-348 186-358 (452)
172 3u3w_A Transcriptional activat 99.3 6E-12 2E-16 122.7 13.6 150 110-288 87-266 (293)
173 1ihg_A Cyclophilin 40; ppiase 99.3 5.8E-12 2E-16 127.6 13.3 112 129-265 230-357 (370)
174 1hz4_A MALT regulatory protein 99.3 5.6E-11 1.9E-15 119.3 20.1 168 108-308 63-268 (373)
175 1elr_A TPR2A-domain of HOP; HO 99.3 2.7E-11 9.2E-16 101.3 13.3 109 131-265 13-128 (131)
176 3ro3_A PINS homolog, G-protein 99.3 1.8E-11 6.1E-16 106.0 12.2 139 156-342 9-159 (164)
177 3gw4_A Uncharacterized protein 99.3 3.5E-11 1.2E-15 109.3 13.2 133 129-290 33-178 (203)
178 2kat_A Uncharacterized protein 99.3 5.7E-11 1.9E-15 98.5 13.0 100 188-308 3-104 (115)
179 4f3v_A ESX-1 secretion system 99.3 1.8E-11 6.3E-16 118.2 10.6 134 132-302 112-250 (282)
180 2kat_A Uncharacterized protein 99.2 6E-11 2E-15 98.3 12.2 100 140-264 3-104 (115)
181 2l6j_A TPR repeat-containing p 99.2 1E-11 3.5E-16 101.5 6.6 86 155-265 3-94 (111)
182 3e4b_A ALGK; tetratricopeptide 99.2 2.7E-10 9.4E-15 118.4 19.0 134 137-307 160-296 (452)
183 1xi4_A Clathrin heavy chain; a 99.2 6.5E-10 2.2E-14 125.8 23.0 208 106-349 1057-1317(1630)
184 3ro3_A PINS homolog, G-protein 99.2 7.1E-11 2.4E-15 102.1 11.7 134 129-291 16-161 (164)
185 1na3_A Designed protein CTPR2; 99.2 1.4E-10 4.8E-15 91.1 11.7 85 154-263 7-91 (91)
186 1na3_A Designed protein CTPR2; 99.2 1.5E-10 5E-15 91.0 11.3 85 202-307 7-91 (91)
187 3ly7_A Transcriptional activat 99.2 2.9E-09 9.8E-14 106.0 21.1 166 146-353 184-351 (372)
188 2l6j_A TPR repeat-containing p 99.1 2.5E-10 8.5E-15 93.1 10.5 87 203-310 3-95 (111)
189 3mv2_B Coatomer subunit epsilo 99.1 1E-09 3.6E-14 107.2 16.0 161 130-347 108-288 (310)
190 1xi4_A Clathrin heavy chain; a 99.1 3.8E-09 1.3E-13 119.7 21.9 170 110-307 1088-1328(1630)
191 3ma5_A Tetratricopeptide repea 99.1 5.9E-10 2E-14 90.3 10.3 90 151-265 2-93 (100)
192 3n71_A Histone lysine methyltr 99.1 5.7E-10 2E-14 116.8 11.6 129 132-288 319-464 (490)
193 2kc7_A BFR218_protein; tetratr 99.1 4.3E-10 1.5E-14 90.2 8.3 92 159-293 3-95 (99)
194 3ma5_A Tetratricopeptide repea 99.0 1.3E-09 4.4E-14 88.3 10.8 89 199-308 2-92 (100)
195 4b4t_Q 26S proteasome regulato 99.0 1.9E-09 6.6E-14 110.0 14.5 163 132-342 14-205 (434)
196 1klx_A Cysteine rich protein B 99.0 5.8E-09 2E-13 89.9 15.3 126 135-301 8-137 (138)
197 3n71_A Histone lysine methyltr 99.0 1.8E-09 6.1E-14 113.0 13.3 119 162-308 315-450 (490)
198 3ly7_A Transcriptional activat 99.0 6.8E-09 2.3E-13 103.3 16.2 151 116-294 195-345 (372)
199 4b4t_Q 26S proteasome regulato 99.0 3.8E-09 1.3E-13 107.8 13.8 165 128-340 61-244 (434)
200 3u64_A Protein TP_0956; tetrat 98.9 1.4E-08 4.8E-13 97.2 15.6 178 139-345 49-273 (301)
201 2kc7_A BFR218_protein; tetratr 98.9 2.5E-09 8.5E-14 85.7 7.6 71 207-298 3-74 (99)
202 1klx_A Cysteine rich protein B 98.9 4.1E-08 1.4E-12 84.5 15.5 117 182-346 7-131 (138)
203 3u64_A Protein TP_0956; tetrat 98.9 3E-08 1E-12 95.0 14.1 157 111-291 100-272 (301)
204 1b89_A Protein (clathrin heavy 98.9 2.9E-09 9.8E-14 108.7 7.5 186 107-348 41-243 (449)
205 1b89_A Protein (clathrin heavy 98.8 4.1E-09 1.4E-13 107.6 8.0 156 108-307 71-255 (449)
206 3mv2_B Coatomer subunit epsilo 98.8 9.3E-08 3.2E-12 93.4 15.3 152 141-349 85-258 (310)
207 3qwp_A SET and MYND domain-con 98.7 7.5E-08 2.5E-12 99.2 11.0 107 186-306 303-426 (429)
208 3qww_A SET and MYND domain-con 98.7 7.4E-08 2.5E-12 99.2 10.7 97 185-295 313-423 (433)
209 1pc2_A Mitochondria fission pr 98.6 2E-07 6.8E-12 80.9 11.3 103 135-259 11-115 (152)
210 3qwp_A SET and MYND domain-con 98.6 6.3E-08 2.1E-12 99.7 9.6 114 132-263 297-427 (429)
211 3qww_A SET and MYND domain-con 98.6 9.1E-08 3.1E-12 98.5 9.1 98 134-251 310-423 (433)
212 3bee_A Putative YFRE protein; 98.6 2.7E-07 9.2E-12 73.7 9.3 72 200-292 2-76 (93)
213 1pc2_A Mitochondria fission pr 98.6 5.8E-07 2E-11 78.0 12.0 106 182-308 10-120 (152)
214 3bee_A Putative YFRE protein; 98.5 5.8E-07 2E-11 71.8 10.6 72 245-345 2-76 (93)
215 4e6h_A MRNA 3'-END-processing 98.5 2.8E-06 9.5E-11 92.3 19.0 169 138-343 325-535 (679)
216 4e6h_A MRNA 3'-END-processing 98.5 3.3E-06 1.1E-10 91.7 19.2 170 134-350 355-579 (679)
217 2v5f_A Prolyl 4-hydroxylase su 98.5 7.9E-07 2.7E-11 72.4 10.6 86 203-302 4-89 (104)
218 2v5f_A Prolyl 4-hydroxylase su 98.4 2.2E-06 7.6E-11 69.7 11.6 78 155-257 4-88 (104)
219 2uy1_A Cleavage stimulation fa 97.9 0.00061 2.1E-08 71.2 19.9 146 138-309 195-370 (493)
220 1nzn_A CGI-135 protein, fissio 97.9 9.3E-05 3.2E-09 61.8 10.9 103 135-259 14-118 (126)
221 1nzn_A CGI-135 protein, fissio 97.8 0.00024 8E-09 59.4 11.3 101 186-304 17-119 (126)
222 4g26_A Pentatricopeptide repea 97.5 0.022 7.5E-07 59.4 24.4 179 132-356 36-221 (501)
223 1btk_A Bruton'S tyrosine kinas 97.5 5.1E-05 1.7E-09 67.5 3.6 105 364-480 4-132 (169)
224 2uy1_A Cleavage stimulation fa 97.5 0.0031 1.1E-07 65.7 17.3 187 114-347 11-247 (493)
225 2lul_A Tyrosine-protein kinase 97.4 0.00011 3.9E-09 64.8 4.8 101 364-479 16-120 (164)
226 3ffl_A Anaphase-promoting comp 97.4 0.00053 1.8E-08 59.8 8.8 118 157-303 21-165 (167)
227 2dn6_A KIAA0640 protein; PH do 97.4 0.00028 9.7E-09 57.8 6.3 106 363-490 8-113 (115)
228 1v5p_A Pleckstrin homology dom 97.3 0.00018 6.1E-09 60.6 4.1 101 365-481 17-121 (126)
229 4h7y_A Dual specificity protei 97.3 0.0028 9.6E-08 54.2 11.2 128 150-308 7-142 (161)
230 3o48_A Mitochondria fission 1 97.2 0.0051 1.7E-07 51.5 11.9 101 136-259 21-122 (134)
231 1y8m_A FIS1; mitochondria, unk 97.1 0.0071 2.4E-07 51.3 12.2 100 137-259 21-121 (144)
232 1v5u_A SBF1, SET binding facto 97.1 0.00053 1.8E-08 56.3 5.1 94 364-478 9-109 (117)
233 1x1f_A Signal-transducing adap 97.0 0.00043 1.5E-08 60.0 4.2 98 362-481 17-114 (149)
234 1pls_A Pleckstrin homology dom 97.0 0.0011 3.8E-08 54.1 6.1 97 364-482 6-103 (113)
235 3ffl_A Anaphase-promoting comp 97.0 0.0037 1.3E-07 54.5 9.5 101 133-259 31-165 (167)
236 1eaz_A Tandem PH domain contai 96.9 0.0003 1E-08 58.6 2.4 98 363-481 14-112 (125)
237 1y8m_A FIS1; mitochondria, unk 96.9 0.011 3.6E-07 50.2 11.8 87 245-357 35-122 (144)
238 3o48_A Mitochondria fission 1 96.9 0.0097 3.3E-07 49.8 11.1 84 247-356 38-122 (134)
239 1wgq_A FYVE, rhogef and PH dom 96.8 0.001 3.5E-08 54.0 4.6 93 363-478 8-101 (109)
240 1v89_A Hypothetical protein KI 96.8 0.0024 8.1E-08 52.3 6.5 96 364-480 9-112 (118)
241 4g26_A Pentatricopeptide repea 96.8 0.093 3.2E-06 54.6 20.1 147 109-291 37-209 (501)
242 4h7y_A Dual specificity protei 96.8 0.023 8E-07 48.5 12.5 125 198-357 7-140 (161)
243 2d9v_A Pleckstrin homology dom 96.7 0.00043 1.5E-08 58.5 1.7 96 364-480 9-114 (130)
244 2cod_A Centaurin-delta 1; ARF 96.7 0.0019 6.5E-08 52.9 5.1 91 363-479 8-98 (115)
245 3aj4_A Pleckstrin homology dom 96.5 0.0016 5.6E-08 53.0 3.8 95 364-479 6-110 (112)
246 1fao_A Dual adaptor of phospho 96.5 0.0021 7.1E-08 53.6 4.3 97 362-481 17-113 (126)
247 2i5f_A Pleckstrin; PH domain, 96.5 0.0025 8.4E-08 51.5 4.6 94 364-478 8-107 (109)
248 2d9w_A Docking protein 2; PH d 96.5 0.0048 1.6E-07 50.8 6.1 107 362-478 11-119 (127)
249 2dkp_A Pleckstrin homology dom 96.4 0.0036 1.2E-07 52.2 5.4 97 363-480 21-119 (128)
250 2dhk_A TBC1 domain family memb 96.4 0.0041 1.4E-07 51.4 5.5 99 363-484 8-108 (119)
251 1x05_A Pleckstrin; PH domain, 96.3 0.0024 8.4E-08 53.4 3.8 98 363-481 18-121 (129)
252 1upq_A PEPP1; PH domain, phosp 96.3 0.0052 1.8E-07 50.7 5.8 97 363-480 11-109 (123)
253 2yry_A Pleckstrin homology dom 96.3 0.0039 1.3E-07 51.4 4.8 96 363-479 22-119 (122)
254 2d9y_A Pleckstrin homology dom 96.3 0.0055 1.9E-07 50.1 5.6 96 363-479 11-108 (117)
255 2rsg_A Collagen type IV alpha- 96.2 0.0019 6.4E-08 50.8 2.4 89 366-478 4-92 (94)
256 1u5d_A SKAP55, SRC kinase-asso 96.2 0.0056 1.9E-07 49.1 5.1 82 382-480 21-105 (108)
257 1v88_A Oxysterol binding prote 96.2 0.0055 1.9E-07 51.6 5.1 93 363-480 8-124 (130)
258 1qqg_A IRS-1, insulin receptor 96.1 0.0038 1.3E-07 59.4 4.2 97 364-482 11-114 (264)
259 2d9x_A Oxysterol binding prote 96.1 0.0073 2.5E-07 49.8 5.5 99 364-486 9-110 (120)
260 2cof_A Protein KIAA1914; PH do 96.1 0.004 1.4E-07 50.3 3.7 90 364-478 9-99 (107)
261 1x1g_A Pleckstrin 2; PH domain 96.1 0.0053 1.8E-07 51.2 4.5 95 363-478 18-122 (129)
262 2d9z_A Protein kinase C, NU ty 95.9 0.011 3.8E-07 48.7 5.7 80 383-479 23-122 (129)
263 3cxb_B Pleckstrin homology dom 95.9 0.011 3.7E-07 48.3 5.7 85 380-480 16-101 (112)
264 3tfm_A Myosin X; split PH doma 95.9 0.0077 2.6E-07 56.0 5.2 97 364-480 59-155 (228)
265 2ff4_A Probable regulatory pro 95.8 0.087 3E-06 52.9 13.2 95 135-247 128-244 (388)
266 1fgy_A GRP1; PH domain, signal 95.8 0.0084 2.9E-07 49.7 4.6 92 364-479 6-119 (127)
267 2coa_A Protein kinase C, D2 ty 95.8 0.0095 3.2E-07 49.0 4.6 80 383-479 23-118 (125)
268 1wg7_A Dedicator of cytokinesi 95.8 0.012 4.1E-07 50.5 5.6 100 363-480 18-124 (150)
269 3rcp_A Pleckstrin homology dom 95.8 0.0086 2.9E-07 47.8 4.4 80 381-479 12-92 (103)
270 1wi1_A Calcium-dependent activ 95.6 0.012 4E-07 49.0 4.6 99 363-479 8-109 (126)
271 1u5e_A SRC-associated adaptor 95.4 0.016 5.3E-07 53.2 5.3 100 363-479 106-207 (211)
272 2p0d_A RHO GTPase-activating p 95.4 0.022 7.5E-07 47.7 5.8 93 382-481 32-125 (129)
273 2j59_M RHO-GTPase activating p 95.4 0.012 4E-07 51.8 4.1 86 380-479 25-110 (168)
274 1ya0_A SMG-7 transcript varian 95.3 0.078 2.7E-06 55.0 10.8 80 206-306 154-233 (497)
275 4a6h_A Phosphatidylinositol 4, 95.3 0.016 5.5E-07 48.0 4.5 98 364-479 7-117 (120)
276 2y7b_A Actin-binding protein a 95.3 0.019 6.4E-07 48.1 5.1 101 365-481 7-129 (134)
277 1u5f_A SRC-associated adaptor 95.3 0.02 6.8E-07 49.1 5.2 99 364-480 18-119 (148)
278 2w2x_D 1-phosphatidylinositol- 95.2 0.016 5.5E-07 48.2 4.2 102 364-479 13-118 (124)
279 1zbp_A Hypothetical protein VP 95.1 0.54 1.9E-05 44.2 14.8 119 132-293 7-134 (273)
280 3tca_A Amyloid beta A4 precurs 95.1 0.026 8.8E-07 54.2 5.9 97 365-479 170-275 (291)
281 2da0_A 130-kDa phosphatidylino 94.9 0.033 1.1E-06 45.3 5.4 93 363-481 10-102 (114)
282 3mkq_A Coatomer beta'-subunit; 94.9 0.23 7.8E-06 54.1 13.7 88 186-283 668-760 (814)
283 1unq_A RAC-alpha serine/threon 94.9 0.0072 2.4E-07 50.2 1.2 96 364-480 9-110 (125)
284 1ya0_A SMG-7 transcript varian 94.9 0.15 5.1E-06 52.8 11.3 80 158-262 154-233 (497)
285 1dro_A Beta-spectrin; cytoskel 94.8 0.023 7.8E-07 47.0 4.1 91 380-480 28-119 (122)
286 1wjm_A Beta-spectrin III; PH d 94.8 0.037 1.3E-06 45.7 5.4 88 381-480 29-117 (123)
287 2rlo_A Centaurin-gamma 1; spli 94.6 0.029 1E-06 46.7 4.3 37 444-480 87-124 (128)
288 3mkq_A Coatomer beta'-subunit; 94.5 0.43 1.5E-05 51.9 14.7 121 134-308 664-798 (814)
289 3lju_X ARF-GAP with dual PH do 94.5 0.036 1.2E-06 55.7 5.5 98 362-479 268-371 (386)
290 1btn_A Beta-spectrin; signal t 94.5 0.032 1.1E-06 44.5 4.1 86 380-477 19-105 (106)
291 2coc_A FYVE, rhogef and PH dom 94.1 0.068 2.3E-06 43.5 5.4 92 364-479 9-105 (112)
292 4gns_B Protein CSD3, chitin bi 94.0 0.4 1.4E-05 52.1 12.6 113 138-285 265-397 (754)
293 3a8p_A T-lymphoma invasion and 94.0 0.074 2.5E-06 50.4 6.1 90 381-482 36-126 (263)
294 1dyn_A Dynamin; signal transdu 93.8 0.077 2.6E-06 43.7 5.1 92 364-476 13-113 (125)
295 4h8s_A DCC-interacting protein 93.8 2.2 7.6E-05 42.7 17.2 92 365-478 303-396 (407)
296 3pp2_A RHO GTPase-activating p 93.4 0.12 4E-06 42.8 5.8 89 381-478 28-121 (124)
297 4gns_B Protein CSD3, chitin bi 93.1 1.2 4.2E-05 48.3 14.5 111 186-308 265-386 (754)
298 1zbp_A Hypothetical protein VP 93.0 2.8 9.6E-05 39.3 15.0 61 221-298 10-70 (273)
299 2ff4_A Probable regulatory pro 92.7 1.6 5.6E-05 43.4 14.1 81 186-287 131-233 (388)
300 2fjl_A 1-phosphatidylinositol- 92.5 0.2 6.7E-06 42.8 5.8 35 445-479 110-147 (150)
301 3lju_X ARF-GAP with dual PH do 92.1 0.071 2.4E-06 53.5 3.1 95 364-479 147-245 (386)
302 2r09_A Cytohesin-3; autoinhibi 92.1 0.11 3.8E-06 51.3 4.4 92 364-479 214-327 (347)
303 2q13_A DCC-interacting protein 91.1 0.18 6.1E-06 50.5 4.8 95 363-479 278-374 (385)
304 2w2u_A Hypothetical P60 katani 90.8 0.39 1.3E-05 36.7 5.3 45 185-248 15-59 (83)
305 2rov_A RHO-associated protein 90.8 0.22 7.6E-06 40.8 4.3 94 366-477 4-112 (117)
306 2dtc_A RAL guanine nucleotide 90.8 0.46 1.6E-05 39.4 6.1 89 381-479 21-111 (126)
307 3mkq_B Coatomer subunit alpha; 90.6 2.2 7.6E-05 37.4 10.8 99 134-285 17-115 (177)
308 2v6y_A AAA family ATPase, P60 90.5 0.42 1.4E-05 36.5 5.3 45 186-249 8-52 (83)
309 1v5m_A SH2 and PH domain-conta 90.4 0.45 1.5E-05 39.3 5.6 88 380-477 38-127 (136)
310 3txn_A 26S proteasome regulato 89.9 5 0.00017 40.0 14.1 96 208-339 103-208 (394)
311 1wfd_A Hypothetical protein 15 89.6 1.4 5E-05 34.2 7.8 50 181-249 7-56 (93)
312 4gmv_A RAS-associated and plec 89.5 0.32 1.1E-05 46.3 4.7 87 381-480 171-266 (281)
313 3kae_A CDC27, possible protein 89.1 11 0.00037 32.9 14.0 119 135-296 15-151 (242)
314 2crb_A Nuclear receptor bindin 88.9 1.8 6E-05 33.3 7.5 44 205-253 16-59 (97)
315 2cpt_A SKD1 protein, vacuolar 88.2 1.2 4.1E-05 36.3 6.7 47 185-250 14-60 (117)
316 3a8n_A TIAM-1, T-lymphoma inva 85.9 0.79 2.7E-05 43.5 5.0 91 380-482 35-126 (279)
317 2ys3_A UNC-112-related protein 85.5 0.66 2.2E-05 38.8 3.7 85 381-486 25-114 (137)
318 3hk0_A Growth factor receptor- 85.1 0.83 2.8E-05 42.8 4.7 87 381-480 145-240 (256)
319 2v6x_A Vacuolar protein sortin 84.4 1.5 5.2E-05 33.4 5.2 45 185-248 9-53 (85)
320 4f7h_A Fermitin family homolog 83.9 0.81 2.8E-05 39.5 3.7 85 381-487 63-153 (173)
321 4b4t_R RPN7, 26S proteasome re 81.6 2.9 9.8E-05 42.3 7.5 104 153-289 128-238 (429)
322 3txn_A 26S proteasome regulato 81.4 9.6 0.00033 37.9 11.1 124 136-288 73-210 (394)
323 3spa_A Mtrpol, DNA-directed RN 80.6 35 0.0012 38.4 15.9 99 156-289 127-231 (1134)
324 2dl1_A Spartin; SPG20, MIT, st 80.6 4.2 0.00014 32.8 6.5 43 186-247 19-61 (116)
325 3kae_A CDC27, possible protein 79.2 31 0.0011 30.0 14.7 79 132-233 43-139 (242)
326 3mkq_B Coatomer subunit alpha; 78.5 33 0.0011 29.9 13.1 35 186-229 21-55 (177)
327 4a5x_A MITD1, MIT domain-conta 78.2 5.8 0.0002 30.3 6.4 45 186-249 13-57 (86)
328 4fhn_B Nucleoporin NUP120; pro 77.7 37 0.0013 38.7 15.9 102 196-311 834-956 (1139)
329 4b4t_R RPN7, 26S proteasome re 75.7 8.3 0.00028 38.8 8.8 89 182-288 109-197 (429)
330 1w1g_A HPDK1, 3-phosphoinositi 75.7 2.7 9.3E-05 35.7 4.3 78 383-483 65-142 (151)
331 4fhn_B Nucleoporin NUP120; pro 74.7 28 0.00096 39.7 13.8 97 148-269 834-958 (1139)
332 2wpv_A GET4, UPF0363 protein Y 74.3 55 0.0019 31.3 13.7 20 246-265 131-150 (312)
333 3spa_A Mtrpol, DNA-directed RN 73.9 35 0.0012 38.3 13.5 86 129-233 134-226 (1134)
334 1mai_A Phospholipase C delta-1 73.1 3.6 0.00012 34.1 4.4 57 423-479 54-120 (131)
335 4b4t_S RPN3, 26S proteasome re 72.1 4.1 0.00014 42.0 5.4 123 133-292 147-303 (523)
336 4ejn_A RAC-alpha serine/threon 70.2 1.9 6.6E-05 43.5 2.5 94 364-479 7-107 (446)
337 4bbk_A Kindlin-1, fermitin fam 69.8 3.1 0.0001 35.5 3.2 86 381-487 42-132 (165)
338 4b4t_P 26S proteasome regulato 67.8 30 0.001 34.9 10.8 100 157-288 138-247 (445)
339 4b4t_S RPN3, 26S proteasome re 64.4 1.1E+02 0.0037 31.5 14.0 66 156-248 231-303 (523)
340 4gq2_M Nucleoporin NUP120; bet 62.8 84 0.0029 35.0 14.2 87 194-294 830-933 (950)
341 3lpz_A GET4 (YOR164C homolog); 61.1 1.2E+02 0.0041 29.2 15.2 127 110-282 24-159 (336)
342 3eab_A Spastin; spastin, MIT, 59.7 6.7 0.00023 30.0 3.0 47 185-247 12-58 (89)
343 2w2u_A Hypothetical P60 katani 59.4 11 0.00037 28.5 4.2 35 112-151 14-48 (83)
344 2v6y_A AAA family ATPase, P60 58.1 11 0.00039 28.3 4.2 33 114-151 8-40 (83)
345 1qsa_A Protein (soluble lytic 57.8 1.9E+02 0.0064 30.4 15.7 104 186-308 230-334 (618)
346 1qsa_A Protein (soluble lytic 56.7 1.3E+02 0.0043 31.7 13.5 120 135-287 227-347 (618)
347 3re2_A Predicted protein; meni 48.1 49 0.0017 32.2 7.5 45 189-237 276-325 (472)
348 2ymb_A MITD1, MIT domain-conta 46.4 4.2 0.00014 37.8 0.0 45 185-248 19-63 (257)
349 1wy6_A Hypothetical protein ST 44.8 91 0.0031 26.1 7.8 78 135-235 74-152 (172)
350 2cpt_A SKD1 protein, vacuolar 44.5 23 0.00079 28.6 4.2 33 113-150 14-46 (117)
351 2v6x_A Vacuolar protein sortin 43.0 27 0.00093 26.2 4.2 34 113-151 9-42 (85)
352 4a5x_A MITD1, MIT domain-conta 42.5 28 0.00095 26.4 4.1 34 113-151 12-45 (86)
353 3u84_A Menin; MLL, JUND, ledgf 40.9 69 0.0024 31.8 7.5 45 189-237 298-347 (550)
354 3ax2_A Mitochondrial import re 38.1 78 0.0027 23.1 5.8 34 160-207 21-54 (73)
355 4gq4_A Menin; tumor suppressor 37.5 84 0.0029 31.2 7.5 45 189-237 283-332 (489)
356 4gq2_M Nucleoporin NUP120; bet 37.5 1.2E+02 0.0041 33.7 10.1 38 146-197 830-867 (950)
357 3lxu_X Tripeptidyl-peptidase 2 37.2 3.3E+02 0.011 31.4 13.4 33 137-169 1122-1154(1354)
358 2adz_A Alpha-1-syntrophin; pro 36.9 31 0.0011 30.0 4.1 35 442-476 137-173 (178)
359 1wy6_A Hypothetical protein ST 35.1 2E+02 0.0068 24.1 8.7 123 135-288 20-154 (172)
360 3tfm_A Myosin X; split PH doma 34.8 63 0.0022 29.1 6.1 52 423-476 174-225 (228)
361 3t5v_B Nuclear mRNA export pro 33.5 2.4E+02 0.0081 28.4 10.6 99 183-292 139-254 (455)
362 2wpv_A GET4, UPF0363 protein Y 32.6 3.3E+02 0.011 25.8 16.9 108 110-231 45-157 (312)
363 3t5x_A PCI domain-containing p 32.1 92 0.0031 27.5 6.6 36 157-206 15-50 (203)
364 1z87_A Alpha-1-syntrophin; pro 31.3 1.2E+02 0.004 28.1 7.4 33 445-477 225-259 (263)
365 3ax2_A Mitochondrial import re 30.8 1E+02 0.0036 22.4 5.4 33 253-295 21-53 (73)
366 1wfd_A Hypothetical protein 15 30.7 1.4E+02 0.0048 22.7 6.5 35 111-150 9-43 (93)
367 1zc3_B Exocyst complex protein 30.4 73 0.0025 25.2 5.1 52 426-479 55-106 (113)
368 3rau_A Tyrosine-protein phosph 30.1 2.6E+02 0.009 27.0 10.1 114 156-288 117-281 (363)
369 2crb_A Nuclear receptor bindin 29.6 83 0.0028 24.1 4.8 29 156-198 15-43 (97)
370 2ijq_A Hypothetical protein; s 29.3 2.6E+02 0.009 23.7 9.5 64 160-239 36-106 (161)
371 2zan_A Vacuolar protein sortin 28.2 12 0.00042 37.7 0.0 45 186-249 8-52 (444)
372 2dl1_A Spartin; SPG20, MIT, st 27.4 76 0.0026 25.4 4.5 37 109-150 14-50 (116)
373 4b4t_P 26S proteasome regulato 26.9 4.7E+02 0.016 25.8 20.9 101 204-340 137-246 (445)
374 3r9m_A BRO1 domain-containing 25.5 4.2E+02 0.014 25.6 10.7 105 156-288 114-282 (376)
375 1om2_A Protein (mitochondrial 24.7 91 0.0031 24.0 4.4 32 160-205 24-55 (95)
376 2ijq_A Hypothetical protein; s 24.3 3.2E+02 0.011 23.1 8.4 60 208-288 36-104 (161)
377 3t5x_A PCI domain-containing p 22.4 1.5E+02 0.0053 26.0 6.2 35 249-293 14-48 (203)
378 3u84_A Menin; MLL, JUND, ledgf 20.1 1.5E+02 0.0051 29.5 5.8 57 247-311 275-336 (550)
No 1
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.91 E-value=1.5e-22 Score=183.66 Aligned_cols=167 Identities=17% Similarity=0.213 Sum_probs=160.3
Q ss_pred hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHH
Q 010976 129 EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFY 208 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~ 208 (496)
+..+..+|++++|+..|+++++++|+++.+++.+|.+|..+|+ +++|+..+++++..+|++..++.
T Consensus 12 G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~--------------~~~a~~~~~~~~~~~~~~~~~~~ 77 (184)
T 3vtx_A 12 GDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGL--------------PNDAIESLKKFVVLDTTSAEAYY 77 (184)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCCCCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHhcCchhHHHHH
Confidence 4446778999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHh
Q 010976 209 NWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 288 (496)
Q Consensus 209 ~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l 288 (496)
.+|.++.. .++++.|+ ..+.+++.++|++..++..+|.++..+|++ ++|+..|++++++
T Consensus 78 ~~~~~~~~----~~~~~~a~-------~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~~l~~ 136 (184)
T 3vtx_A 78 ILGSANFM----IDEKQAAI-------DALQRAIALNTVYADAYYKLGLVYDSMGEH----------DKAIEAYEKTISI 136 (184)
T ss_dssp HHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHH
T ss_pred HHHHHHHH----cCCHHHHH-------HHHHHHHHhCccchHHHHHHHHHHHHhCCc----------hhHHHHHHHHHHh
Confidence 99999999 99999999 899999999999999999999999999999 9999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHH
Q 010976 289 QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYS 349 (496)
Q Consensus 289 ~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~ 349 (496)
+|+++.+++++|.+|..+|+ +.+|..+|+++++++|+++.|.
T Consensus 137 ~p~~~~~~~~lg~~~~~~g~-------------------~~~A~~~~~~al~~~p~~a~~~ 178 (184)
T 3vtx_A 137 KPGFIRAYQSIGLAYEGKGL-------------------RDEAVKYFKKALEKEEKKAKYE 178 (184)
T ss_dssp CTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHTTHHHHHHC
T ss_pred cchhhhHHHHHHHHHHHCCC-------------------HHHHHHHHHHHHhCCccCHHHH
Confidence 99999999999999999999 9999999999999999987654
No 2
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.90 E-value=1.1e-22 Score=190.74 Aligned_cols=170 Identities=16% Similarity=0.090 Sum_probs=160.2
Q ss_pred hhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHH
Q 010976 130 EGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYN 209 (496)
Q Consensus 130 ~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~ 209 (496)
..+...|++++|+..|+++++++|+++.+++++|.++..+|+ +++|+..|+++++++|++..++++
T Consensus 13 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~--------------~~~A~~~~~~al~~~P~~~~a~~~ 78 (217)
T 2pl2_A 13 VQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGL--------------VNPALENGKTLVARTPRYLGGYMV 78 (217)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCcHHHHHH
Confidence 346678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHc-----------CCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHH
Q 010976 210 WAIAISDRAKMR-----------GRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTA 278 (496)
Q Consensus 210 lg~~~~~~~~~~-----------g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~A 278 (496)
+|.++.. + |++++|+ ..|+++++++|+++.+++++|.++..+|++ ++|
T Consensus 79 lg~~~~~----~~~~~~~~~~~~g~~~~A~-------~~~~~al~~~P~~~~~~~~lg~~~~~~g~~----------~~A 137 (217)
T 2pl2_A 79 LSEAYVA----LYRQAEDRERGKGYLEQAL-------SVLKDAERVNPRYAPLHLQRGLVYALLGER----------DKA 137 (217)
T ss_dssp HHHHHHH----HHHTCSSHHHHHHHHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHH
T ss_pred HHHHHHH----hhhhhhhhcccccCHHHHH-------HHHHHHHHhCcccHHHHHHHHHHHHHcCCh----------HHH
Confidence 9999999 7 7777777 899999999999999999999999999999 999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHHHHh
Q 010976 279 ISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRL 354 (496)
Q Consensus 279 i~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al~~ 354 (496)
+..|+++++++ +++.+++++|.+|..+|+ +.+|..+|+++++++|++......+..
T Consensus 138 ~~~~~~al~~~-~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~al~~~P~~~~~~~~la~ 193 (217)
T 2pl2_A 138 EASLKQALALE-DTPEIRSALAELYLSMGR-------------------LDEALAQYAKALEQAPKDLDLRVRYAS 193 (217)
T ss_dssp HHHHHHHHHHC-CCHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHhcc-cchHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 99999999999 999999999999999999 899999999999999999866555544
No 3
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.90 E-value=2.8e-22 Score=188.06 Aligned_cols=177 Identities=14% Similarity=0.141 Sum_probs=154.4
Q ss_pred hhhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh--------
Q 010976 108 HQLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQES-------- 169 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~-------- 169 (496)
+...|++++|+..+.+++... +..+..+|++++|+..|+++++++|+++.+++++|.++..+
T Consensus 15 ~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~ 94 (217)
T 2pl2_A 15 LYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRE 94 (217)
T ss_dssp HHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhc
Confidence 456789999999999999876 34566789999999999999999999999999999999999
Q ss_pred ---cCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCC
Q 010976 170 ---ADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNW 246 (496)
Q Consensus 170 ---~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P 246 (496)
|+ +++|+..|+++++++|++..+++++|.++.. +|++++|+ ..|+++++++
T Consensus 95 ~~~g~--------------~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~----~g~~~~A~-------~~~~~al~~~- 148 (217)
T 2pl2_A 95 RGKGY--------------LEQALSVLKDAERVNPRYAPLHLQRGLVYAL----LGERDKAE-------ASLKQALALE- 148 (217)
T ss_dssp HHHHH--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHC-
T ss_pred ccccC--------------HHHHHHHHHHHHHhCcccHHHHHHHHHHHHH----cCChHHHH-------HHHHHHHhcc-
Confidence 88 9999999999999999999999999999999 99999999 8999999999
Q ss_pred CCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHH
Q 010976 247 NSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNE 326 (496)
Q Consensus 247 ~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~ 326 (496)
+++.+++++|.+|..+|++ ++|+..|+++++++|+++.+++++|.++..+|+
T Consensus 149 ~~~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g~------------------ 200 (217)
T 2pl2_A 149 DTPEIRSALAELYLSMGRL----------DEALAQYAKALEQAPKDLDLRVRYASALLLKGK------------------ 200 (217)
T ss_dssp CCHHHHHHHHHHHHHHTCH----------HHHHHHHHHHHHHSTTCHHHHHHHHHHHTC---------------------
T ss_pred cchHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCChHHHHHHHHHHHHccC------------------
Confidence 9999999999999999999 999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHH
Q 010976 327 LYSQSAIYIAAAH 339 (496)
Q Consensus 327 ~~~~A~~~~~~a~ 339 (496)
+.+|..+|+++.
T Consensus 201 -~~~A~~~~~~~~ 212 (217)
T 2pl2_A 201 -AEEAARAAALEH 212 (217)
T ss_dssp -------------
T ss_pred -HHHHHHHHHHHh
Confidence 667777776654
No 4
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.89 E-value=3.8e-22 Score=203.61 Aligned_cols=192 Identities=11% Similarity=0.025 Sum_probs=162.5
Q ss_pred hhhhhcHHHHHHHHHHhhccc----------hhhhHhhcc-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCC
Q 010976 108 HQLAEQNNAAMELINSVTGVD----------EEGRSRQRI-LTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLD 176 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~-~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~ 176 (496)
+...++++.|+..+.+++... +..+..+|+ +++|+..|+++++++|++..+|+++|.++..+|+
T Consensus 107 ~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~----- 181 (382)
T 2h6f_A 107 LQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRD----- 181 (382)
T ss_dssp HHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC-----
T ss_pred HHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccC-----
Confidence 345688999999999999877 334556786 9999999999999999999999999999999999
Q ss_pred CCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 010976 177 STSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWG 256 (496)
Q Consensus 177 ~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg 256 (496)
+++|+.+|+++|+++|++..+|+++|.++.. +|++++|+ .+|+++|+++|++..+|+++|
T Consensus 182 ---------~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~----~g~~~eAl-------~~~~~al~l~P~~~~a~~~lg 241 (382)
T 2h6f_A 182 ---------PSQELEFIADILNQDAKNYHAWQHRQWVIQE----FKLWDNEL-------QYVDQLLKEDVRNNSVWNQRY 241 (382)
T ss_dssp ---------CTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCCTTHH-------HHHHHHHHHCTTCHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHHhCccCHHHHHHHHHHHHH----cCChHHHH-------HHHHHHHHhCCCCHHHHHHHH
Confidence 9999999999999999999999999999999 99999998 899999999999999999999
Q ss_pred HHHHH-ccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHH
Q 010976 257 LALQE-LSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYI 335 (496)
Q Consensus 257 ~~l~~-~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~ 335 (496)
.+|.. .|.+++|. ++.++.+|++|++++|++..+|+++|.++...|... +.++..++
T Consensus 242 ~~l~~l~~~~~eA~-----~~~el~~~~~Al~l~P~~~~a~~~l~~ll~~~g~~~-----------------~~~a~~~~ 299 (382)
T 2h6f_A 242 FVISNTTGYNDRAV-----LEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSK-----------------YPNLLNQL 299 (382)
T ss_dssp HHHHHTTCSCSHHH-----HHHHHHHHHHHHHHSTTCHHHHHHHHHHHTTTCGGG-----------------CHHHHHHH
T ss_pred HHHHHhcCcchHHH-----HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHccCccc-----------------hHHHHHHH
Confidence 99999 66652221 133369999999999999999999999999887310 45666666
Q ss_pred HHHHhcCCcHHH
Q 010976 336 AAAHALKPSYSV 347 (496)
Q Consensus 336 ~~a~~l~p~~~~ 347 (496)
.++ +.+|++..
T Consensus 300 ~~~-~~~p~~~~ 310 (382)
T 2h6f_A 300 LDL-QPSHSSPY 310 (382)
T ss_dssp HHH-TTTCCCHH
T ss_pred HHh-ccCCCCHH
Confidence 666 77777663
No 5
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.89 E-value=4.7e-22 Score=202.95 Aligned_cols=174 Identities=12% Similarity=0.055 Sum_probs=157.1
Q ss_pred hHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc-CCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010976 132 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESA-DNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 210 (496)
Q Consensus 132 ~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~-~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~l 210 (496)
+...|++++|+..|+++|+++|++..+|+++|.++..+| + +++|+.+|+++++++|++..+|+++
T Consensus 107 ~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d--------------~~eAl~~~~~al~l~P~~~~a~~~~ 172 (382)
T 2h6f_A 107 LQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKD--------------LHEEMNYITAIIEEQPKNYQVWHHR 172 (382)
T ss_dssp HHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC--------------HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccC--------------HHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 556799999999999999999999999999999999999 7 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcC
Q 010976 211 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQF 290 (496)
Q Consensus 211 g~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P 290 (496)
|.++.. +|++++|+ .+|+++|+++|++..+|+++|.++..+|++ ++|+.+|+++|+++|
T Consensus 173 g~~~~~----~g~~~eAl-------~~~~kal~ldP~~~~a~~~lg~~~~~~g~~----------~eAl~~~~~al~l~P 231 (382)
T 2h6f_A 173 RVLVEW----LRDPSQEL-------EFIADILNQDAKNYHAWQHRQWVIQEFKLW----------DNELQYVDQLLKEDV 231 (382)
T ss_dssp HHHHHH----HTCCTTHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHTCC----------TTHHHHHHHHHHHCT
T ss_pred HHHHHH----ccCHHHHH-------HHHHHHHHhCccCHHHHHHHHHHHHHcCCh----------HHHHHHHHHHHHhCC
Confidence 999999 99999999 899999999999999999999999999999 999999999999999
Q ss_pred CCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Q 010976 291 DFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALR 353 (496)
Q Consensus 291 ~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al~ 353 (496)
++..+|+++|.++..++.. .....+..++.+|.+++.++|++......+.
T Consensus 232 ~~~~a~~~lg~~l~~l~~~-------------~~eA~~~~el~~~~~Al~l~P~~~~a~~~l~ 281 (382)
T 2h6f_A 232 RNNSVWNQRYFVISNTTGY-------------NDRAVLEREVQYTLEMIKLVPHNESAWNYLK 281 (382)
T ss_dssp TCHHHHHHHHHHHHHTTCS-------------CSHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCc-------------chHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 9999999999999994431 0111134557899999999999985554444
No 6
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.88 E-value=5.5e-22 Score=217.81 Aligned_cols=162 Identities=27% Similarity=0.332 Sum_probs=151.6
Q ss_pred hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHH
Q 010976 129 EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFY 208 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~ 208 (496)
+..+..+|++++|+.+|+++++++|+++.+|+++|.+|..+|+ +++|+++|++|++++|+++.+|+
T Consensus 16 G~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~--------------~~eA~~~~~~Al~l~P~~~~a~~ 81 (723)
T 4gyw_A 16 ANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGK--------------LQEALMHYKEAIRISPTFADAYS 81 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCCHHHHH
Confidence 4446778999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHh
Q 010976 209 NWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 288 (496)
Q Consensus 209 ~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l 288 (496)
++|.+|.. +|++++|+ ++|+++++++|+++.+|+++|.+|..+|++ ++|+..|++|+++
T Consensus 82 nLg~~l~~----~g~~~~A~-------~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~----------~eAi~~~~~Al~l 140 (723)
T 4gyw_A 82 NMGNTLKE----MQDVQGAL-------QCYTRAIQINPAFADAHSNLASIHKDSGNI----------PEAIASYRTALKL 140 (723)
T ss_dssp HHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHH
T ss_pred HHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHh
Confidence 99999999 99999999 899999999999999999999999999999 9999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCc
Q 010976 289 QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 344 (496)
Q Consensus 289 ~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~ 344 (496)
+|+++.++++||.+|..+|+ +.+|..+|++++++.|+
T Consensus 141 ~P~~~~a~~~L~~~l~~~g~-------------------~~~A~~~~~kal~l~~~ 177 (723)
T 4gyw_A 141 KPDFPDAYCNLAHCLQIVCD-------------------WTDYDERMKKLVSIVAD 177 (723)
T ss_dssp CSCCHHHHHHHHHHHHHTTC-------------------CTTHHHHHHHHHHHHHH
T ss_pred CCCChHHHhhhhhHHHhccc-------------------HHHHHHHHHHHHHhChh
Confidence 99999999999999999998 56666667776665543
No 7
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.88 E-value=3.4e-21 Score=180.94 Aligned_cols=194 Identities=16% Similarity=0.240 Sum_probs=167.4
Q ss_pred hhhhHhhccHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHH
Q 010976 129 EEGRSRQRILTFAAKRYANAIERNP-EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAF 207 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~~~P-~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~ 207 (496)
+..+...|++++|+..|+++++++| .+..+++++|.++..+|+ +++|+..|+++++++|++..++
T Consensus 14 g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~ 79 (228)
T 4i17_A 14 GNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKK--------------YKEAADYFDIAIKKNYNLANAY 79 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHTTCSHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhc--------------HHHHHHHHHHHHHhCcchHHHH
Confidence 3446678999999999999999999 999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH-------HHHHHHHHHHHHccCcchHHHhhhhHHHHHH
Q 010976 208 YNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP-------QALNNWGLALQELSAIVPAREKQTIVRTAIS 280 (496)
Q Consensus 208 ~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~-------~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~ 280 (496)
+++|.+|.. +|++++|+ ..|+++++++|+++ .+++++|.++..+|++ ++|+.
T Consensus 80 ~~l~~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~A~~ 138 (228)
T 4i17_A 80 IGKSAAYRD----MKNNQEYI-------ATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNI----------EKAEE 138 (228)
T ss_dssp HHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCH----------HHHHH
T ss_pred HHHHHHHHH----cccHHHHH-------HHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccH----------HHHHH
Confidence 999999999 99999999 89999999999999 6689999999999998 99999
Q ss_pred HHHHHHHhcCC--CHHHHHHHHHHHHHcchhHHhccCCCCCCC--------CCcHHHHHHHHHHHHHHHhcCCcHHHHHH
Q 010976 281 KFRAAIQLQFD--FHRAIYNLGTVLYGLAEDTLRTGGTVNPRE--------VSPNELYSQSAIYIAAAHALKPSYSVYSS 350 (496)
Q Consensus 281 ~~~~Al~l~P~--~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~--------~~~~~~~~~A~~~~~~a~~l~p~~~~y~~ 350 (496)
.|+++++++|+ ++.+++++|.+|...|+........+.... ......|.+|..+|+++++++|++.....
T Consensus 139 ~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~ 218 (228)
T 4i17_A 139 NYKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQ 218 (228)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHH
Confidence 99999999999 999999999999999986222211111000 00112568999999999999999998777
Q ss_pred HHHhhhc
Q 010976 351 ALRLVRS 357 (496)
Q Consensus 351 al~~~~~ 357 (496)
.+..++.
T Consensus 219 ~l~~i~~ 225 (228)
T 4i17_A 219 MQDQVKA 225 (228)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 7766554
No 8
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.86 E-value=3.3e-20 Score=188.20 Aligned_cols=164 Identities=21% Similarity=0.194 Sum_probs=114.0
Q ss_pred hhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCC
Q 010976 110 LAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTS 179 (496)
Q Consensus 110 ~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~ 179 (496)
..|++++|+..+.+++... +..+...|++++|+..|+++++++|++..++.++|.++...|+
T Consensus 147 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~-------- 218 (388)
T 1w3b_A 147 ALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARI-------- 218 (388)
T ss_dssp TTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC--------
T ss_pred HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCC--------
Confidence 4566677777666666543 2234456777777777777777777777777777777777777
Q ss_pred cchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 010976 180 PSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLAL 259 (496)
Q Consensus 180 ~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l 259 (496)
+++|+..|++++.++|++..+++++|.++.. .|++++|+ ..|+++++++|+++.+++++|.++
T Consensus 219 ------~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~l~~~~ 281 (388)
T 1w3b_A 219 ------FDRAVAAYLRALSLSPNHAVVHGNLACVYYE----QGLIDLAI-------DTYRRAIELQPHFPDAYCNLANAL 281 (388)
T ss_dssp ------TTHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHTCSSCHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHhhCcCCHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHhhCCCCHHHHHHHHHHH
Confidence 7777777777777777777777777777777 77777777 677777777777777777777777
Q ss_pred HHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010976 260 QELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 260 ~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~ 308 (496)
...|++ ++|+..|+++++++|++..+++++|.++...|+
T Consensus 282 ~~~g~~----------~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 320 (388)
T 1w3b_A 282 KEKGSV----------AEAEDCYNTALRLCPTHADSLNNLANIKREQGN 320 (388)
T ss_dssp HHHSCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC
T ss_pred HHcCCH----------HHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCC
Confidence 777777 666666666666666666666666666666665
No 9
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.86 E-value=9.4e-20 Score=179.03 Aligned_cols=202 Identities=13% Similarity=0.085 Sum_probs=154.3
Q ss_pred hhhhhcHHHHHHHHHHhhccc----------hhhhHhhc-cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCC
Q 010976 108 HQLAEQNNAAMELINSVTGVD----------EEGRSRQR-ILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLD 176 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g-~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~ 176 (496)
+...+++++|+..+.+++... +..+...| ++++|+.+|+++++++|++..++..+|.++...|+
T Consensus 66 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~----- 140 (330)
T 3hym_B 66 LVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESE----- 140 (330)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTC-----
T ss_pred HHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccC-----
Confidence 345677888888887777655 23345567 78888888888888888888888888888888888
Q ss_pred CCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 010976 177 STSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWG 256 (496)
Q Consensus 177 ~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg 256 (496)
+++|+..|+++++++|++..+++.+|.++.. .|++++|+ ..|+++++.+|+++.+++++|
T Consensus 141 ---------~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~-------~~~~~al~~~~~~~~~~~~l~ 200 (330)
T 3hym_B 141 ---------HDQAMAAYFTAAQLMKGCHLPMLYIGLEYGL----TNNSKLAE-------RFFSQALSIAPEDPFVMHEVG 200 (330)
T ss_dssp ---------HHHHHHHHHHHHHHTTTCSHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHTTCTTCHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHHhccccHHHHHHHHHHHHH----HhhHHHHH-------HHHHHHHHhCCCChHHHHHHH
Confidence 8888888888888888888888888888888 88888887 788888888899999999999
Q ss_pred HHHHHccCcchHH---------------------------------HhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010976 257 LALQELSAIVPAR---------------------------------EKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVL 303 (496)
Q Consensus 257 ~~l~~~g~~~~A~---------------------------------~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~ 303 (496)
.++...|++++|. ...|++++|+..|+++++++|++..+++++|.++
T Consensus 201 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 280 (330)
T 3hym_B 201 VVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIH 280 (330)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHH
Confidence 9999998885551 1346667777777777777777777777777777
Q ss_pred HHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Q 010976 304 YGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALR 353 (496)
Q Consensus 304 ~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al~ 353 (496)
..+|+ +.+|..+|+++++++|++......+.
T Consensus 281 ~~~g~-------------------~~~A~~~~~~al~~~p~~~~~~~~l~ 311 (330)
T 3hym_B 281 SLMGN-------------------FENAVDYFHTALGLRRDDTFSVTMLG 311 (330)
T ss_dssp HHHTC-------------------HHHHHHHHHTTTTTCSCCHHHHHHHH
T ss_pred HHhcc-------------------HHHHHHHHHHHHccCCCchHHHHHHH
Confidence 77776 77777888888888887774444443
No 10
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.85 E-value=9.1e-20 Score=184.90 Aligned_cols=197 Identities=25% Similarity=0.224 Sum_probs=133.5
Q ss_pred hhhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 010976 108 HQLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDS 177 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~ 177 (496)
+...|++++|+..+.+++... +..+...|++++|+..|+++++++|++..++..+|.++..+|+
T Consensus 77 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~------ 150 (388)
T 1w3b_A 77 YKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGR------ 150 (388)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSC------
T ss_pred HHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccC------
Confidence 345666777777777666544 2234455666777777777777777776677777777766666
Q ss_pred CCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 010976 178 TSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGL 257 (496)
Q Consensus 178 ~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 257 (496)
+++|++.|+++++++|++..+|+++|.++.. .|++++|+ ..|+++++++|++..+++++|.
T Consensus 151 --------~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~lg~ 211 (388)
T 1w3b_A 151 --------LEEAKACYLKAIETQPNFAVAWSNLGCVFNA----QGEIWLAI-------HHFEKAVTLDPNFLDAYINLGN 211 (388)
T ss_dssp --------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHhcCCCcHHHHHHHHH
Confidence 7777777777777777777777777777777 77777777 4555555555555555555555
Q ss_pred HHHHccCcchHH------------------------HhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhc
Q 010976 258 ALQELSAIVPAR------------------------EKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRT 313 (496)
Q Consensus 258 ~l~~~g~~~~A~------------------------~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~ 313 (496)
++...|++++|. ...|++++|+..|+++++++|+++.+++++|.++...|+
T Consensus 212 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~----- 286 (388)
T 1w3b_A 212 VLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGS----- 286 (388)
T ss_dssp HHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSC-----
T ss_pred HHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC-----
Confidence 555555553330 022333777777777777777777777777777777777
Q ss_pred cCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHH
Q 010976 314 GGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVY 348 (496)
Q Consensus 314 ~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y 348 (496)
+.+|..+|+++++++|.+...
T Consensus 287 --------------~~~A~~~~~~al~~~p~~~~~ 307 (388)
T 1w3b_A 287 --------------VAEAEDCYNTALRLCPTHADS 307 (388)
T ss_dssp --------------HHHHHHHHHHHHHHCTTCHHH
T ss_pred --------------HHHHHHHHHHHHhhCcccHHH
Confidence 677788888888887776643
No 11
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.85 E-value=6.4e-20 Score=172.47 Aligned_cols=196 Identities=20% Similarity=0.178 Sum_probs=171.0
Q ss_pred hhhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 010976 108 HQLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDS 177 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~ 177 (496)
+...++++.|+..+.+++... +..+...|++++|+..|+++++.+|++..++..+|.++...|+
T Consensus 33 ~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~------ 106 (243)
T 2q7f_A 33 GSEFGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEM------ 106 (243)
T ss_dssp ---------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------
T ss_pred HHHhhCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhcc------
Confidence 345566677777777666544 3456678999999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 010976 178 TSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGL 257 (496)
Q Consensus 178 ~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 257 (496)
+++|+..|+++++++|++..+++.+|.++.. .|++++|+ ..|+++++.+|++..+++++|.
T Consensus 107 --------~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~l~~ 167 (243)
T 2q7f_A 107 --------YKEAKDMFEKALRAGMENGDLFYMLGTVLVK----LEQPKLAL-------PYLQRAVELNENDTEARFQFGM 167 (243)
T ss_dssp --------HHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH----TSCHHHHH-------HHHHHHHHHCTTCHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hccHHHHH-------HHHHHHHHhCCccHHHHHHHHH
Confidence 9999999999999999999999999999999 99999999 8899999999999999999999
Q ss_pred HHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHH
Q 010976 258 ALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAA 337 (496)
Q Consensus 258 ~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~ 337 (496)
++...|++ ++|+..|+++++.+|++..+++++|.++...|+ +..|..+|++
T Consensus 168 ~~~~~~~~----------~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-------------------~~~A~~~~~~ 218 (243)
T 2q7f_A 168 CLANEGML----------DEALSQFAAVTEQDPGHADAFYNAGVTYAYKEN-------------------REKALEMLDK 218 (243)
T ss_dssp HHHHHTCC----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------TTHHHHHHHH
T ss_pred HHHHcCCH----------HHHHHHHHHHHHhCcccHHHHHHHHHHHHHccC-------------------HHHHHHHHHH
Confidence 99999999 999999999999999999999999999999998 8899999999
Q ss_pred HHhcCCcHHHHHHHHHhhhc
Q 010976 338 AHALKPSYSVYSSALRLVRS 357 (496)
Q Consensus 338 a~~l~p~~~~y~~al~~~~~ 357 (496)
+++++|++......+..+..
T Consensus 219 ~~~~~p~~~~~~~~~~~l~~ 238 (243)
T 2q7f_A 219 AIDIQPDHMLALHAKKLLGH 238 (243)
T ss_dssp HHHHCTTCHHHHHHHTC---
T ss_pred HHccCcchHHHHHHHHHHHh
Confidence 99999999977766655443
No 12
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.85 E-value=4.4e-21 Score=169.31 Aligned_cols=142 Identities=12% Similarity=-0.032 Sum_probs=135.2
Q ss_pred hHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010976 132 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 211 (496)
Q Consensus 132 ~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg 211 (496)
+..+|++++|+..|++++..+|+++.+++.+|.+|+.+|+ +++|+++|+++++++|+++.+|+++|
T Consensus 7 ~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~--------------~~~A~~~~~~al~~~p~~~~a~~~lg 72 (150)
T 4ga2_A 7 RRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKE--------------YDLAKKYICTYINVQERDPKAHRFLG 72 (150)
T ss_dssp CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 4457999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHH-HHHHHHhcC
Q 010976 212 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISK-FRAAIQLQF 290 (496)
Q Consensus 212 ~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~-~~~Al~l~P 290 (496)
.+|.. +|++++|+ .+|+++++++|+++.+++++|.+|..+|++ ++|+.. +++|++++|
T Consensus 73 ~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~la~~~~~~~~~----------~~aa~~~~~~al~l~P 131 (150)
T 4ga2_A 73 LLYEL----EENTDKAV-------ECYRRSVELNPTQKDLVLKIAELLCKNDVT----------DGRAKYWVERAAKLFP 131 (150)
T ss_dssp HHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHCSS----------SSHHHHHHHHHHHHST
T ss_pred HHHHH----cCchHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHcCCh----------HHHHHHHHHHHHHhCc
Confidence 99999 99999999 899999999999999999999999999999 887765 599999999
Q ss_pred CCHHHHHHHHHHHHHcch
Q 010976 291 DFHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 291 ~~~~a~~~lg~~~~~~g~ 308 (496)
+++.++..++.++...|+
T Consensus 132 ~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 132 GSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp TCHHHHHHHHHHHHTCCC
T ss_pred CCHHHHHHHHHHHHHhCc
Confidence 999999999999998885
No 13
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.84 E-value=5.1e-20 Score=193.40 Aligned_cols=192 Identities=16% Similarity=0.145 Sum_probs=167.8
Q ss_pred hhcHHHHHHHHHHhhccc----------hhhhHhhccH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCC
Q 010976 111 AEQNNAAMELINSVTGVD----------EEGRSRQRIL-TFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTS 179 (496)
Q Consensus 111 ~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~-~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~ 179 (496)
...++.++..+....... +..+...|++ ++|+.+|+++++++|+++.+|+++|.+|..+|+
T Consensus 81 ~~~~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~-------- 152 (474)
T 4abn_A 81 QEEMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGD-------- 152 (474)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC--------
Confidence 345666666666554433 4456677999 999999999999999999999999999999999
Q ss_pred cchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 010976 180 PSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMR--GRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGL 257 (496)
Q Consensus 180 ~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~--g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 257 (496)
+++|+.+|+++++++|+ ..+++++|.+|.. + +...+....|++|+..|+++++++|+++.+|+++|.
T Consensus 153 ------~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~----~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 221 (474)
T 4abn_A 153 ------VTSAHTCFSGALTHCKN-KVSLQNLSMVLRQ----LQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGN 221 (474)
T ss_dssp ------HHHHHHHHHHHHTTCCC-HHHHHHHHHHHTT----CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHhhCCC-HHHHHHHHHHHHH----hccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 99999999999999999 7999999999998 7 344444444445559999999999999999999999
Q ss_pred HHHHc--------cCcchHHHhhhhHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHH
Q 010976 258 ALQEL--------SAIVPAREKQTIVRTAISKFRAAIQLQF---DFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNE 326 (496)
Q Consensus 258 ~l~~~--------g~~~~A~~~~~~~~~Ai~~~~~Al~l~P---~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~ 326 (496)
+|..+ |++ ++|+.+|+++++++| +++.+++++|.+|..+|+
T Consensus 222 ~~~~~~~~~~~~~g~~----------~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~------------------ 273 (474)
T 4abn_A 222 AYLSLYFNTGQNPKIS----------QQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEES------------------ 273 (474)
T ss_dssp HHHHHHHHTTCCHHHH----------HHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTC------------------
T ss_pred HHHHHHHhhccccchH----------HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCC------------------
Confidence 99999 888 999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCcHHHHHH
Q 010976 327 LYSQSAIYIAAAHALKPSYSVYSS 350 (496)
Q Consensus 327 ~~~~A~~~~~~a~~l~p~~~~y~~ 350 (496)
|.+|..+|+++++++|++.....
T Consensus 274 -~~~A~~~~~~al~l~p~~~~a~~ 296 (474)
T 4abn_A 274 -YGEALEGFSQAAALDPAWPEPQQ 296 (474)
T ss_dssp -HHHHHHHHHHHHHHCTTCHHHHH
T ss_pred -HHHHHHHHHHHHHhCCCCHHHHH
Confidence 99999999999999999884433
No 14
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.6e-19 Score=170.81 Aligned_cols=192 Identities=17% Similarity=0.147 Sum_probs=173.7
Q ss_pred hhhhhcHHHHHHHHHHhhccc---------hhhhHhhccHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHhcC
Q 010976 108 HQLAEQNNAAMELINSVTGVD---------EEGRSRQRILTFAAKRYANAIERNPED-------YDALYNWALVLQESAD 171 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~---------~~~~~~~g~~~~Ai~~~~~al~~~P~~-------~~a~~~lg~~~~~~~~ 171 (496)
+...+++++|+..+.+++... +..+...|++++|+..|+++++++|++ +.+++.+|.++..+|+
T Consensus 15 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 94 (258)
T 3uq3_A 15 FYKARQFDEAIEHYNKAWELHKDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGD 94 (258)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSCCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhccHHHHHHHHHHHHHhhccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHccc
Confidence 456788999999998887654 445677899999999999999999887 7999999999999999
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHH--------------------------hCCCCHHHHHHHHHHHHHHHHHcCCHH
Q 010976 172 NVSLDSTSPSKDALLEEACKKYDEATR--------------------------LCPTLHDAFYNWAIAISDRAKMRGRTK 225 (496)
Q Consensus 172 ~~~~~~~~~~~~~~~~~A~~~~~~Al~--------------------------l~P~~~~a~~~lg~~~~~~~~~~g~~~ 225 (496)
+++|+..|++++. .+|.+..+++++|.++.. .|+++
T Consensus 95 --------------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 156 (258)
T 3uq3_A 95 --------------LKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFT----KSDWP 156 (258)
T ss_dssp --------------HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH----TTCHH
T ss_pred --------------HHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHH----hcCHH
Confidence 8888888888888 777788999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 010976 226 EAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYG 305 (496)
Q Consensus 226 eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~ 305 (496)
+|+ ..|++++.++|.++.+++++|.++..+|++ ++|+..|+++++++|+++.+++++|.++..
T Consensus 157 ~A~-------~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 219 (258)
T 3uq3_A 157 NAV-------KAYTEMIKRAPEDARGYSNRAAALAKLMSF----------PEAIADCNKAIEKDPNFVRAYIRKATAQIA 219 (258)
T ss_dssp HHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHH-------HHHHHHHhcCcccHHHHHHHHHHHHHhCCH----------HHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 999 899999999999999999999999999999 999999999999999999999999999999
Q ss_pred cchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcC------CcHHHHHHHHH
Q 010976 306 LAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALK------PSYSVYSSALR 353 (496)
Q Consensus 306 ~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~------p~~~~y~~al~ 353 (496)
+|+ +..|..+|+++++++ |.+......+.
T Consensus 220 ~g~-------------------~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~ 254 (258)
T 3uq3_A 220 VKE-------------------YASALETLDAARTKDAEVNNGSSAREIDQLYY 254 (258)
T ss_dssp TTC-------------------HHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHH
T ss_pred Hhh-------------------HHHHHHHHHHHHHhChhhcCCCchHHHHHHHH
Confidence 999 899999999999999 88776665554
No 15
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.84 E-value=4.2e-19 Score=177.73 Aligned_cols=193 Identities=16% Similarity=0.164 Sum_probs=157.5
Q ss_pred hhhcHHHHHH-HHHHhhccc--------------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCC
Q 010976 110 LAEQNNAAME-LINSVTGVD--------------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVS 174 (496)
Q Consensus 110 ~~~~~~~A~~-~~~~~l~~~--------------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~ 174 (496)
..++++.|+. .+.+++... +..+...|++++|+..|+++++.+|++..+++.+|.++...|+
T Consensus 37 ~~~~~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~--- 113 (368)
T 1fch_A 37 WLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQ--- 113 (368)
T ss_dssp ---------CHHHHCCCCCCSSCTTTTCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHhhhhhHHHhcCCCCcccchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcC---
Confidence 3455555655 555444332 3345567888888888888888888888888888888888888
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH----------------------
Q 010976 175 LDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWK---------------------- 232 (496)
Q Consensus 175 ~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~---------------------- 232 (496)
+++|+..|+++++++|++..+++++|.++.. .|++++|++.|+
T Consensus 114 -----------~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (368)
T 1fch_A 114 -----------ELLAISALRRCLELKPDNQTALMALAVSFTN----ESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGG 178 (368)
T ss_dssp -----------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTSTTTGGGCC--------
T ss_pred -----------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhh
Confidence 8888888888888888888888888888888 888888876665
Q ss_pred --------------------HHHHHHHHHHhcCCC--CHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcC
Q 010976 233 --------------------QATKNYEKAVQLNWN--SPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQF 290 (496)
Q Consensus 233 --------------------~A~~~~~~Al~l~P~--~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P 290 (496)
+|+..|+++++++|+ ++.+++++|.++...|++ ++|+..|+++++++|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~al~~~~ 248 (368)
T 1fch_A 179 AGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEY----------DKAVDCFTAALSVRP 248 (368)
T ss_dssp -------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCT
T ss_pred hcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCc
Confidence 456789999999999 899999999999999999 999999999999999
Q ss_pred CCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHH
Q 010976 291 DFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYS 349 (496)
Q Consensus 291 ~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~ 349 (496)
+++.+++++|.++...|+ +..|..+|+++++++|++....
T Consensus 249 ~~~~~~~~l~~~~~~~g~-------------------~~~A~~~~~~al~~~~~~~~~~ 288 (368)
T 1fch_A 249 NDYLLWNKLGATLANGNQ-------------------SEEAVAAYRRALELQPGYIRSR 288 (368)
T ss_dssp TCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCCCcHHHH
Confidence 999999999999999998 8899999999999999877433
No 16
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.84 E-value=6e-20 Score=170.92 Aligned_cols=165 Identities=18% Similarity=0.102 Sum_probs=146.2
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCHHHHHH----------------HHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHH
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDYDALYN----------------WALVLQESADNVSLDSTSPSKDALLEEACKKYD 194 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~----------------lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 194 (496)
.+...|++++|+..|+++++++|+++.+++. +|.+|..+|+ +++|+..|+
T Consensus 13 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~--------------~~~A~~~~~ 78 (208)
T 3urz_A 13 AAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRN--------------YDKAYLFYK 78 (208)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCC--------------HHHHHHHHH
Confidence 3456799999999999999999999999999 9999999999 999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhh
Q 010976 195 EATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTI 274 (496)
Q Consensus 195 ~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~ 274 (496)
++++++|++..+++++|.++.. +|++++|+ ..|+++++++|+++.+++++|.+|...|+. .
T Consensus 79 ~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~-------~~~~~al~~~P~~~~a~~~lg~~~~~~~~~--------~ 139 (208)
T 3urz_A 79 ELLQKAPNNVDCLEACAEMQVC----RGQEKDAL-------RMYEKILQLEADNLAANIFLGNYYYLTAEQ--------E 139 (208)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHH----HTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHHHH--------H
T ss_pred HHHHHCCCCHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHcCCCCHHHHHHHHHHHHHHhHH--------H
Confidence 9999999999999999999999 99999999 899999999999999999999999887653 2
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHH
Q 010976 275 VRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVY 348 (496)
Q Consensus 275 ~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y 348 (496)
...++..|++++..+|. ..+++++|.++..+|+ |.+|+.+|+++++++|+....
T Consensus 140 ~~~~~~~~~~~~~~~~~-~~a~~~~g~~~~~~~~-------------------~~~A~~~~~~al~l~P~~~~~ 193 (208)
T 3urz_A 140 KKKLETDYKKLSSPTKM-QYARYRDGLSKLFTTR-------------------YEKARNSLQKVILRFPSTEAQ 193 (208)
T ss_dssp HHHHHHHHC---CCCHH-HHHHHHHHHHHHHHHT-------------------HHHHHHHHHHHTTTSCCHHHH
T ss_pred HHHHHHHHHHHhCCCch-hHHHHHHHHHHHHccC-------------------HHHHHHHHHHHHHhCCCHHHH
Confidence 26778888888754432 3578999999999998 999999999999999987643
No 17
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.83 E-value=6.7e-20 Score=201.20 Aligned_cols=146 Identities=25% Similarity=0.364 Sum_probs=139.3
Q ss_pred hCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Q 010976 151 RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEEL 230 (496)
Q Consensus 151 ~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~ 230 (496)
..|++++++++||.+|..+|+ +++|+++|++|++++|++..+|++||.+|.. +|++++|+
T Consensus 4 s~P~~a~al~nLG~~~~~~G~--------------~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~----~g~~~eA~-- 63 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGN--------------IEEAVRLYRKALEVFPEFAAAHSNLASVLQQ----QGKLQEAL-- 63 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH----TTCHHHHH--
T ss_pred CCCCcHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHH--
Confidence 469999999999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhH
Q 010976 231 WKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDT 310 (496)
Q Consensus 231 ~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~ 310 (496)
..|+++++++|+++.+|+++|.+|..+|++ ++|+.+|++|++++|++..++++||.+|..+|+
T Consensus 64 -----~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~----------~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~-- 126 (723)
T 4gyw_A 64 -----MHYKEAIRISPTFADAYSNMGNTLKEMQDV----------QGALQCYTRAIQINPAFADAHSNLASIHKDSGN-- 126 (723)
T ss_dssp -----HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--
T ss_pred -----HHHHHHHHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--
Confidence 899999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHH
Q 010976 311 LRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSS 350 (496)
Q Consensus 311 ~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~ 350 (496)
+.+|+.+|+++++++|++.....
T Consensus 127 -----------------~~eAi~~~~~Al~l~P~~~~a~~ 149 (723)
T 4gyw_A 127 -----------------IPEAIASYRTALKLKPDFPDAYC 149 (723)
T ss_dssp -----------------HHHHHHHHHHHHHHCSCCHHHHH
T ss_pred -----------------HHHHHHHHHHHHHhCCCChHHHh
Confidence 99999999999999999884433
No 18
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.83 E-value=8.9e-20 Score=183.22 Aligned_cols=188 Identities=14% Similarity=0.153 Sum_probs=164.9
Q ss_pred hhhhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCC
Q 010976 107 PHQLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLD 176 (496)
Q Consensus 107 ~~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~ 176 (496)
.+...|++++|+..+.+++... +..+...|++++|+..|+++++++|++..+++++|.+|..+|+
T Consensus 74 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~----- 148 (365)
T 4eqf_A 74 KRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSH----- 148 (365)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----
T ss_pred HHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHcccc-----
Confidence 3456899999999999998766 4456778999999999999999999999999999999999999
Q ss_pred CCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHH----------HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCC
Q 010976 177 STSPSKDALLEEACKKYDEATRLCPTLHDAFYNW----------AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNW 246 (496)
Q Consensus 177 ~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~l----------g~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P 246 (496)
+++|+..|+++++++|++..++.++ |.++.. .|++++|+ ..|+++++++|
T Consensus 149 ---------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~-------~~~~~al~~~p 208 (365)
T 4eqf_A 149 ---------QQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVD----SSVLEGVK-------ELYLEAAHQNG 208 (365)
T ss_dssp ---------HHHHHHHHHHHHHHCHHHHCC-------------------C----CHHHHHHH-------HHHHHHHHHSC
T ss_pred ---------HHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhh----hhhHHHHH-------HHHHHHHHhCc
Confidence 9999999999999999877776665 888888 88888888 89999999999
Q ss_pred C--CHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCc
Q 010976 247 N--SPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSP 324 (496)
Q Consensus 247 ~--~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~ 324 (496)
+ ++.+++++|.++..+|++ ++|+..|+++++++|+++.+++++|.+|...|+
T Consensus 209 ~~~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~---------------- 262 (365)
T 4eqf_A 209 DMIDPDLQTGLGVLFHLSGEF----------NRAIDAFNAALTVRPEDYSLWNRLGATLANGDR---------------- 262 (365)
T ss_dssp SSCCHHHHHHHHHHHHHHTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC----------------
T ss_pred CccCHHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC----------------
Confidence 9 999999999999999999 999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHhcCCcHHHH
Q 010976 325 NELYSQSAIYIAAAHALKPSYSVY 348 (496)
Q Consensus 325 ~~~~~~A~~~~~~a~~l~p~~~~y 348 (496)
+.+|..+|+++++++|++...
T Consensus 263 ---~~~A~~~~~~al~~~p~~~~~ 283 (365)
T 4eqf_A 263 ---SEEAVEAYTRALEIQPGFIRS 283 (365)
T ss_dssp ---HHHHHHHHHHHHHHCTTCHHH
T ss_pred ---HHHHHHHHHHHHhcCCCchHH
Confidence 889999999999999987743
No 19
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.83 E-value=1.9e-18 Score=171.31 Aligned_cols=208 Identities=13% Similarity=0.030 Sum_probs=169.6
Q ss_pred CChhhhhhcHHHHHHHHHHhhccch-------------------------hhhHhhccHHHHHHHHHHHHHhCCCCHHHH
Q 010976 105 NTPHQLAEQNNAAMELINSVTGVDE-------------------------EGRSRQRILTFAAKRYANAIERNPEDYDAL 159 (496)
Q Consensus 105 ~~~~~~~~~~~~A~~~~~~~l~~~~-------------------------~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~ 159 (496)
...+...|+++.|+..+.+++.... ..+...|++++|+..|+++++.+|+++.++
T Consensus 78 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 157 (359)
T 3ieg_A 78 GHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELR 157 (359)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHH
Confidence 3344567899999999998887654 445667999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 010976 160 YNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYE 239 (496)
Q Consensus 160 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~ 239 (496)
..+|.++...|+ +++|+..|++++.++|++..+++++|.++.. .|++++|+ ..|+
T Consensus 158 ~~~~~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~-------~~~~ 212 (359)
T 3ieg_A 158 ELRAECFIKEGE--------------PRKAISDLKAASKLKSDNTEAFYKISTLYYQ----LGDHELSL-------SEVR 212 (359)
T ss_dssp HHHHHHHHHTTC--------------HHHHHHHHHHHHTTCSCCHHHHHHHHHHHHH----HTCHHHHH-------HHHH
T ss_pred HHHHHHHHHCCC--------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHH-------HHHH
Confidence 999999999999 9999999999999999999999999999999 99999999 4455
Q ss_pred HHHhcCCCCHHHHH------------HHHHHHHHccCcchH----------------------------HHhhhhHHHHH
Q 010976 240 KAVQLNWNSPQALN------------NWGLALQELSAIVPA----------------------------REKQTIVRTAI 279 (496)
Q Consensus 240 ~Al~l~P~~~~a~~------------~lg~~l~~~g~~~~A----------------------------~~~~~~~~~Ai 279 (496)
++++.+|++..++. .+|.++...|++++| ....|++++|+
T Consensus 213 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 292 (359)
T 3ieg_A 213 ECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAI 292 (359)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHH
Confidence 55555555544432 224445555555444 01244459999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhhh
Q 010976 280 SKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLVR 356 (496)
Q Consensus 280 ~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al~~~~ 356 (496)
..|+++++++|+++.+++++|.++...|+ +.+|..+|+++++++|++......+..+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-------------------~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 350 (359)
T 3ieg_A 293 RICSEVLQMEPDNVNALKDRAEAYLIEEM-------------------YDEAIQDYEAAQEHNENDQQIREGLEKAQ 350 (359)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHhcCCCChHHHHHHHHHH
Confidence 99999999999999999999999999998 89999999999999999887666655443
No 20
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.82 E-value=9.1e-20 Score=156.08 Aligned_cols=122 Identities=16% Similarity=0.114 Sum_probs=115.8
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHH
Q 010976 147 NAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKE 226 (496)
Q Consensus 147 ~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~e 226 (496)
++..++|+.++++.++|.+|+..|+ |++|+++|+++++++|+++.+|+++|.+|.. +|++++
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~----~~~~~~ 65 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGD--------------YPTAMRHYNEAVKRDPENAILYSNRAACLTK----LMEFQR 65 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCCHHHHHHHhhHHHh----hccHHH
Confidence 3456899999999999999999999 9999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010976 227 AEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVL 303 (496)
Q Consensus 227 A~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~ 303 (496)
|+ ..|+++++++|+++.+|+++|.+|..+|++ ++|+..|+++++++|++..++.+|+.++
T Consensus 66 A~-------~~~~~al~~~p~~~~a~~~lg~~~~~~~~~----------~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 66 AL-------DDCDTCIRLDSKFIKGYIRKAACLVAMREW----------SKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HH-------HHHHHHHHhhhhhhHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 99 899999999999999999999999999999 9999999999999999999999999875
No 21
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.82 E-value=2e-18 Score=172.83 Aligned_cols=199 Identities=19% Similarity=0.199 Sum_probs=177.8
Q ss_pred hhhhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCC----
Q 010976 107 PHQLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADN---- 172 (496)
Q Consensus 107 ~~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~---- 172 (496)
.+...|++++|+..+.+++... +..+...|++++|+..|+++++++|++..+++.+|.+|...|+.
T Consensus 73 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~ 152 (368)
T 1fch_A 73 RRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQAC 152 (368)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 3456789999999999998765 34567789999999999999999999999999999999999884
Q ss_pred --------CCCCCC-----------------------CcchhhhHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHH
Q 010976 173 --------VSLDST-----------------------SPSKDALLEEACKKYDEATRLCPT--LHDAFYNWAIAISDRAK 219 (496)
Q Consensus 173 --------~~~~~~-----------------------~~~~~~~~~~A~~~~~~Al~l~P~--~~~a~~~lg~~~~~~~~ 219 (496)
..+... .....|++++|+..|+++++++|+ +..+++++|.++..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~--- 229 (368)
T 1fch_A 153 EILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNL--- 229 (368)
T ss_dssp HHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHH---
T ss_pred HHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHH---
Confidence 111111 112568899999999999999999 89999999999999
Q ss_pred HcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHH
Q 010976 220 MRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNL 299 (496)
Q Consensus 220 ~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~l 299 (496)
.|++++|+ ..|++++.++|+++.+++++|.++...|++ ++|+..|+++++++|++..+++++
T Consensus 230 -~g~~~~A~-------~~~~~al~~~~~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~l 291 (368)
T 1fch_A 230 -SGEYDKAV-------DCFTAALSVRPNDYLLWNKLGATLANGNQS----------EEAVAAYRRALELQPGYIRSRYNL 291 (368)
T ss_dssp -TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred -cCCHHHHH-------HHHHHHHHhCcCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCcHHHHHHH
Confidence 99999999 889999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcH
Q 010976 300 GTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 345 (496)
Q Consensus 300 g~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~ 345 (496)
|.++..+|+ +..|..+|++++.+.|+.
T Consensus 292 ~~~~~~~g~-------------------~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 292 GISCINLGA-------------------HREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHHHHTC-------------------HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHCCC-------------------HHHHHHHHHHHHHhCCCC
Confidence 999999999 899999999999998876
No 22
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.82 E-value=1.6e-18 Score=164.36 Aligned_cols=190 Identities=18% Similarity=0.141 Sum_probs=169.6
Q ss_pred hhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCC
Q 010976 109 QLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDST 178 (496)
Q Consensus 109 ~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~ 178 (496)
...++++.|+..+.+++... +..+...|++++|+..|+++++.+|++..++..+|.+|...|+
T Consensus 48 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~------- 120 (252)
T 2ho1_A 48 LQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKR------- 120 (252)
T ss_dssp HHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------
T ss_pred HHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhH-------
Confidence 34566666777777666544 3446678999999999999999999999999999999999999
Q ss_pred CcchhhhHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 010976 179 SPSKDALLEEACKKYDEATR--LCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWG 256 (496)
Q Consensus 179 ~~~~~~~~~~A~~~~~~Al~--l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg 256 (496)
+++|+++|++++. .+|.+..+++++|.++.. .|++++|+ ..|+++++.+|.+..++..+|
T Consensus 121 -------~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~-------~~~~~~~~~~~~~~~~~~~la 182 (252)
T 2ho1_A 121 -------YEEAYQRLLEASQDTLYPERSRVFENLGLVSLQ----MKKPAQAK-------EYFEKSLRLNRNQPSVALEMA 182 (252)
T ss_dssp -------HHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCSCCHHHHHHHH
T ss_pred -------HHHHHHHHHHHHhCccCcccHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHhcCcccHHHHHHHH
Confidence 9999999999999 889999999999999999 99999999 788888999999999999999
Q ss_pred HHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHH
Q 010976 257 LALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIA 336 (496)
Q Consensus 257 ~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~ 336 (496)
.++...|++ ++|+..|+++++..|++..++..++.++...|+ +..|..+++
T Consensus 183 ~~~~~~g~~----------~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-------------------~~~A~~~~~ 233 (252)
T 2ho1_A 183 DLLYKEREY----------VPARQYYDLFAQGGGQNARSLLLGIRLAKVFED-------------------RDTAASYGL 233 (252)
T ss_dssp HHHHHTTCH----------HHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTC-------------------HHHHHHHHH
T ss_pred HHHHHcCCH----------HHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccC-------------------HHHHHHHHH
Confidence 999999999 999999999999999999999999999999998 889999999
Q ss_pred HHHhcCCcHHHHHHHH
Q 010976 337 AAHALKPSYSVYSSAL 352 (496)
Q Consensus 337 ~a~~l~p~~~~y~~al 352 (496)
+++++.|++..+...+
T Consensus 234 ~~~~~~p~~~~~~~~l 249 (252)
T 2ho1_A 234 QLKRLYPGSLEYQEFQ 249 (252)
T ss_dssp HHHHHCTTSHHHHHHH
T ss_pred HHHHHCCCCHHHHHHH
Confidence 9999999988765543
No 23
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.82 E-value=1.1e-19 Score=182.50 Aligned_cols=188 Identities=19% Similarity=0.161 Sum_probs=165.4
Q ss_pred CCChhhhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHH----------H
Q 010976 104 GNTPHQLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNW----------A 163 (496)
Q Consensus 104 ~~~~~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~l----------g 163 (496)
....+...|+++.|+..+.+++... +..+..+|++++|+..|+++++++|++..++..+ |
T Consensus 105 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~ 184 (365)
T 4eqf_A 105 LGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMS 184 (365)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC---------------
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHH
Confidence 3444567899999999999998766 3456778999999999999999999887777665 8
Q ss_pred HHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Q 010976 164 LVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT--LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKA 241 (496)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~--~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~A 241 (496)
.++...|+ +++|+.+|+++++++|+ ++.+++++|.+|.. +|++++|+ ..|+++
T Consensus 185 ~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~----~g~~~~A~-------~~~~~a 239 (365)
T 4eqf_A 185 KSPVDSSV--------------LEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHL----SGEFNRAI-------DAFNAA 239 (365)
T ss_dssp ----CCHH--------------HHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHH----HTCHHHHH-------HHHHHH
T ss_pred HHHhhhhh--------------HHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHH----CCCHHHHH-------HHHHHH
Confidence 88888888 99999999999999999 99999999999999 99999999 899999
Q ss_pred HhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCC
Q 010976 242 VQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPRE 321 (496)
Q Consensus 242 l~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~ 321 (496)
++++|+++.+++++|.+|...|++ ++|+..|+++++++|+++.+++++|.+|..+|+
T Consensus 240 l~~~p~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~------------- 296 (365)
T 4eqf_A 240 LTVRPEDYSLWNRLGATLANGDRS----------EEAVEAYTRALEIQPGFIRSRYNLGISCINLGA------------- 296 (365)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC-------------
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCC-------------
Confidence 999999999999999999999999 999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHhcCCcH
Q 010976 322 VSPNELYSQSAIYIAAAHALKPSY 345 (496)
Q Consensus 322 ~~~~~~~~~A~~~~~~a~~l~p~~ 345 (496)
+.+|..+|+++++++|+.
T Consensus 297 ------~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 297 ------YREAVSNFLTALSLQRKS 314 (365)
T ss_dssp ------CHHHHHHHHHHHHHHHCC
T ss_pred ------HHHHHHHHHHHHHhCccc
Confidence 889999999999998873
No 24
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.81 E-value=8.3e-19 Score=168.13 Aligned_cols=197 Identities=13% Similarity=0.024 Sum_probs=171.2
Q ss_pred hhhhhhcHHHHHHHHHHhhccc-------------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCC
Q 010976 107 PHQLAEQNNAAMELINSVTGVD-------------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNV 173 (496)
Q Consensus 107 ~~~~~~~~~~A~~~~~~~l~~~-------------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~ 173 (496)
.+...++++.|+..+.+++... +..+...|++++|+..|+++++++|++..++..+|.+|..+|+
T Consensus 46 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~-- 123 (272)
T 3u4t_A 46 CYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGN-- 123 (272)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTC--
T ss_pred HHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccC--
Confidence 4557889999999999888732 3345667999999999999999999999999999999999999
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHH
Q 010976 174 SLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALN 253 (496)
Q Consensus 174 ~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~ 253 (496)
+++|+.+|+++++++|++..+++++|..... .+++++|+ ..|+++++++|++..+++
T Consensus 124 ------------~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~----~~~~~~A~-------~~~~~a~~~~p~~~~~~~ 180 (272)
T 3u4t_A 124 ------------FPLAIQYMEKQIRPTTTDPKVFYELGQAYYY----NKEYVKAD-------SSFVKVLELKPNIYIGYL 180 (272)
T ss_dssp ------------HHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHH
T ss_pred ------------HHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH----HHHHHHHH-------HHHHHHHHhCccchHHHH
Confidence 9999999999999999999999999944444 56888877 899999999999999999
Q ss_pred HHHHHHHHccC---cchHHHhhhhHHHHHHHHHHHHHhc---CC-----CHHHHHHHHHHHHHcchhHHhccCCCCCCCC
Q 010976 254 NWGLALQELSA---IVPAREKQTIVRTAISKFRAAIQLQ---FD-----FHRAIYNLGTVLYGLAEDTLRTGGTVNPREV 322 (496)
Q Consensus 254 ~lg~~l~~~g~---~~~A~~~~~~~~~Ai~~~~~Al~l~---P~-----~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~ 322 (496)
++|.++..+|+ + ++|+..|++++++. |+ ...++.++|.+|...|+
T Consensus 181 ~~~~~~~~~~~~~~~----------~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------------- 236 (272)
T 3u4t_A 181 WRARANAAQDPDTKQ----------GLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRD-------------- 236 (272)
T ss_dssp HHHHHHHHHSTTCSS----------CTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTC--------------
T ss_pred HHHHHHHHcCcchhh----------HHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCC--------------
Confidence 99999999999 8 89999999999986 55 24789999999999999
Q ss_pred CcHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhhhc
Q 010976 323 SPNELYSQSAIYIAAAHALKPSYSVYSSALRLVRS 357 (496)
Q Consensus 323 ~~~~~~~~A~~~~~~a~~l~p~~~~y~~al~~~~~ 357 (496)
+..|..+|+++++++|+++.....+..+..
T Consensus 237 -----~~~A~~~~~~al~~~p~~~~a~~~l~~~~~ 266 (272)
T 3u4t_A 237 -----KVKADAAWKNILALDPTNKKAIDGLKMKLE 266 (272)
T ss_dssp -----HHHHHHHHHHHHHHCTTCHHHHHHHC----
T ss_pred -----HHHHHHHHHHHHhcCccHHHHHHHhhhhhc
Confidence 999999999999999999988777765443
No 25
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.81 E-value=5e-18 Score=157.04 Aligned_cols=191 Identities=16% Similarity=0.068 Sum_probs=156.0
Q ss_pred hhhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh-cCCCCCC
Q 010976 108 HQLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQES-ADNVSLD 176 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~-~~~~~~~ 176 (496)
+...|+++.|+..+.+++... +..+...|++++|+..|++++..+|++..++..+|.++... |+
T Consensus 18 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~----- 92 (225)
T 2vq2_A 18 YMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNR----- 92 (225)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCC-----
T ss_pred HHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCc-----
Confidence 345677888888887777654 23455678888888888888888888888888888888888 88
Q ss_pred CCCcchhhhHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Q 010976 177 STSPSKDALLEEACKKYDEATR--LCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNN 254 (496)
Q Consensus 177 ~~~~~~~~~~~~A~~~~~~Al~--l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~ 254 (496)
+++|+..|+++++ .+|.+..+++++|.++.. .|++++|+ ..|+++++.+|.+..++.+
T Consensus 93 ---------~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~ 152 (225)
T 2vq2_A 93 ---------PAESMAYFDKALADPTYPTPYIANLNKGICSAK----QGQFGLAE-------AYLKRSLAAQPQFPPAFKE 152 (225)
T ss_dssp ---------HHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHHH
T ss_pred ---------HHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCCchHHHH
Confidence 8888888888888 666778888888888888 88888888 7778888888888888888
Q ss_pred HHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHH
Q 010976 255 WGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQF-DFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAI 333 (496)
Q Consensus 255 lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P-~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~ 333 (496)
+|.++...|++ ++|+..|+++++++| ++..++..++.++...|+ +..+..
T Consensus 153 la~~~~~~~~~----------~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~a~~ 203 (225)
T 2vq2_A 153 LARTKMLAGQL----------GDADYYFKKYQSRVEVLQADDLLLGWKIAKALGN-------------------AQAAYE 203 (225)
T ss_dssp HHHHHHHHTCH----------HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC-------------------HHHHHH
T ss_pred HHHHHHHcCCH----------HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCc-------------------HHHHHH
Confidence 88888888888 888888888888888 888888888888888887 677788
Q ss_pred HHHHHHhcCCcHHHHHHHH
Q 010976 334 YIAAAHALKPSYSVYSSAL 352 (496)
Q Consensus 334 ~~~~a~~l~p~~~~y~~al 352 (496)
+++.+...+|++..+...+
T Consensus 204 ~~~~~~~~~p~~~~~~~~l 222 (225)
T 2vq2_A 204 YEAQLQANFPYSEELQTVL 222 (225)
T ss_dssp HHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHh
Confidence 8888888888887665544
No 26
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.81 E-value=1.7e-18 Score=163.77 Aligned_cols=174 Identities=17% Similarity=0.138 Sum_probs=161.7
Q ss_pred hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC-----
Q 010976 129 EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL----- 203 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~----- 203 (496)
+..+...|++++|+..|+++++.+ .++.+++.+|.++..+|+ +++|+..|+++++++|++
T Consensus 12 g~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~ 76 (258)
T 3uq3_A 12 GNKFYKARQFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKGE--------------YETAISTLNDAVEQGREMRADYK 76 (258)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHccc--------------HHHHHHHHHHHHHhCcccccchH
Confidence 344667899999999999999999 999999999999999999 999999999999999887
Q ss_pred --HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-------------------HHHHHHhcCCCCHHHHHHHHHHHHHc
Q 010976 204 --HDAFYNWAIAISDRAKMRGRTKEAEELWKQATK-------------------NYEKAVQLNWNSPQALNNWGLALQEL 262 (496)
Q Consensus 204 --~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~-------------------~~~~Al~l~P~~~~a~~~lg~~l~~~ 262 (496)
..+++.+|.++.. .|++++|+..|++++. .+++++..+|.++.+++++|.++...
T Consensus 77 ~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (258)
T 3uq3_A 77 VISKSFARIGNAYHK----LGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTK 152 (258)
T ss_dssp HHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH----cccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHh
Confidence 7999999999999 9999999988877655 68888889999999999999999999
Q ss_pred cCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcC
Q 010976 263 SAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALK 342 (496)
Q Consensus 263 g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~ 342 (496)
|++ ++|+..|+++++++|+++.+++++|.++...|+ +..|..+|.++++++
T Consensus 153 ~~~----------~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~-------------------~~~A~~~~~~al~~~ 203 (258)
T 3uq3_A 153 SDW----------PNAVKAYTEMIKRAPEDARGYSNRAAALAKLMS-------------------FPEAIADCNKAIEKD 203 (258)
T ss_dssp TCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHC
T ss_pred cCH----------HHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCC-------------------HHHHHHHHHHHHHhC
Confidence 999 999999999999999999999999999999999 899999999999999
Q ss_pred CcHHHHHH
Q 010976 343 PSYSVYSS 350 (496)
Q Consensus 343 p~~~~y~~ 350 (496)
|++.....
T Consensus 204 ~~~~~~~~ 211 (258)
T 3uq3_A 204 PNFVRAYI 211 (258)
T ss_dssp TTCHHHHH
T ss_pred HHHHHHHH
Confidence 99874433
No 27
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.80 E-value=4.1e-19 Score=194.78 Aligned_cols=167 Identities=8% Similarity=-0.021 Sum_probs=157.8
Q ss_pred HhhccHHHHHHHHHHHH--------HhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCH
Q 010976 133 SRQRILTFAAKRYANAI--------ERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLH 204 (496)
Q Consensus 133 ~~~g~~~~Ai~~~~~al--------~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~ 204 (496)
...|++++|+..|++++ +.+|++.++++.+|.+|..+|+ +++|+..|+++++++|++.
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~--------------~~~A~~~~~~al~~~p~~~ 467 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGD--------------VAKATRKLDDLAERVGWRW 467 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHCCCH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCC--------------HHHHHHHHHHHhccCcchH
Confidence 45799999999999999 9999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHH
Q 010976 205 DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRA 284 (496)
Q Consensus 205 ~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~ 284 (496)
.+|+++|.+|.. +|++++|+ ..|+++++++|+++.+++++|.++..+|++ ++ +..|++
T Consensus 468 ~a~~~lg~~~~~----~g~~~~A~-------~~~~~al~l~P~~~~~~~~lg~~~~~~g~~----------~~-~~~~~~ 525 (681)
T 2pzi_A 468 RLVWYRAVAELL----TGDYDSAT-------KHFTEVLDTFPGELAPKLALAATAELAGNT----------DE-HKFYQT 525 (681)
T ss_dssp HHHHHHHHHHHH----HTCHHHHH-------HHHHHHHHHSTTCSHHHHHHHHHHHHHTCC----------CT-TCHHHH
T ss_pred HHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCChHHHHHHHHHHHHcCCh----------HH-HHHHHH
Confidence 999999999999 99999999 899999999999999999999999999999 99 999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHHHHh
Q 010976 285 AIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRL 354 (496)
Q Consensus 285 Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al~~ 354 (496)
|++++|++..+++++|.++..+|+ +.+|..+|+++++++|++......+..
T Consensus 526 al~~~P~~~~a~~~lg~~~~~~g~-------------------~~~A~~~~~~al~l~P~~~~a~~~~~~ 576 (681)
T 2pzi_A 526 VWSTNDGVISAAFGLARARSAEGD-------------------RVGAVRTLDEVPPTSRHFTTARLTSAV 576 (681)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHTSCTTSTTHHHHHHHHHH
T ss_pred HHHhCCchHHHHHHHHHHHHHcCC-------------------HHHHHHHHHhhcccCcccHHHHHHHHH
Confidence 999999999999999999999999 899999999999999998855544443
No 28
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.80 E-value=1.5e-17 Score=163.04 Aligned_cols=197 Identities=14% Similarity=0.120 Sum_probs=174.0
Q ss_pred hhhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCC-----
Q 010976 108 HQLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADN----- 172 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~----- 172 (496)
+...+++++|+..+.+++... +..+...|++++|+..|+++++++|++..++..+|.++...|+.
T Consensus 31 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 110 (327)
T 3cv0_A 31 MLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALA 110 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 345678888888888877654 34456779999999999999999999999999999999888874
Q ss_pred -------CCCC----------------------CC-CcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcC
Q 010976 173 -------VSLD----------------------ST-SPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRG 222 (496)
Q Consensus 173 -------~~~~----------------------~~-~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g 222 (496)
..+. .. .....|++++|+..|+++++.+|++..+++.+|.++.. .|
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~ 186 (327)
T 3cv0_A 111 SLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNL----SN 186 (327)
T ss_dssp HHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH----TT
T ss_pred HHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----hc
Confidence 1111 11 25667889999999999999999999999999999999 99
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010976 223 RTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTV 302 (496)
Q Consensus 223 ~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~ 302 (496)
++++|+ ..|+++++.+|+++.+++++|.++...|++ ++|+..|+++++++|++..+++++|.+
T Consensus 187 ~~~~A~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~a~~~~~~~~~~~~~l~~~ 249 (327)
T 3cv0_A 187 NYDSAA-------ANLRRAVELRPDDAQLWNKLGATLANGNRP----------QEALDAYNRALDINPGYVRVMYNMAVS 249 (327)
T ss_dssp CHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHH-------HHHHHHHHhCCCcHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 999999 888899999999999999999999999999 999999999999999999999999999
Q ss_pred HHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCc
Q 010976 303 LYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 344 (496)
Q Consensus 303 ~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~ 344 (496)
+..+|+ +..|..+|++++.++|.
T Consensus 250 ~~~~g~-------------------~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 250 YSNMSQ-------------------YDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHTTC-------------------HHHHHHHHHHHHHHHTT
T ss_pred HHHhcc-------------------HHHHHHHHHHHHHhCCc
Confidence 999999 89999999999999998
No 29
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.80 E-value=2.2e-18 Score=155.90 Aligned_cols=157 Identities=17% Similarity=0.178 Sum_probs=146.1
Q ss_pred hhhhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCC
Q 010976 107 PHQLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLD 176 (496)
Q Consensus 107 ~~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~ 176 (496)
.+...|++++|+..+.+++..+ +..+..+|++++|+..+.+++..+|++..++..+|.++...++
T Consensus 14 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 88 (184)
T 3vtx_A 14 KKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDE----- 88 (184)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC-----
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCC-----
Confidence 3567899999999999999877 3456778999999999999999999999999999999999999
Q ss_pred CCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 010976 177 STSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWG 256 (496)
Q Consensus 177 ~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg 256 (496)
++.|+..+.+++.++|++..+++.+|.+|.. +|++++|+ ..|+++++++|+++.+++++|
T Consensus 89 ---------~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~----~g~~~~A~-------~~~~~~l~~~p~~~~~~~~lg 148 (184)
T 3vtx_A 89 ---------KQAAIDALQRAIALNTVYADAYYKLGLVYDS----MGEHDKAI-------EAYEKTISIKPGFIRAYQSIG 148 (184)
T ss_dssp ---------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHHhCccchHHHHHHHHHHHH----hCCchhHH-------HHHHHHHHhcchhhhHHHHHH
Confidence 9999999999999999999999999999999 99999999 899999999999999999999
Q ss_pred HHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 010976 257 LALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLG 300 (496)
Q Consensus 257 ~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg 300 (496)
.+|..+|++ ++|+.+|++|++++|+++ .++||
T Consensus 149 ~~~~~~g~~----------~~A~~~~~~al~~~p~~a--~~~la 180 (184)
T 3vtx_A 149 LAYEGKGLR----------DEAVKYFKKALEKEEKKA--KYELA 180 (184)
T ss_dssp HHHHHTTCH----------HHHHHHHHHHHHTTHHHH--HHCSC
T ss_pred HHHHHCCCH----------HHHHHHHHHHHhCCccCH--HHHHH
Confidence 999999999 999999999999999864 34444
No 30
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.80 E-value=6.7e-18 Score=167.31 Aligned_cols=187 Identities=17% Similarity=0.103 Sum_probs=173.6
Q ss_pred hhhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 010976 108 HQLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDS 177 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~ 177 (496)
+...|+++.|+..+.+++... +..+...|++++|+..|+++++++|++..++..+|.++...|+
T Consensus 13 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------ 86 (359)
T 3ieg_A 13 LLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGK------ 86 (359)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC------
T ss_pred HHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCC------
Confidence 456789999999999988766 3456778999999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHHHHHHHHHHhCC---CCHHHHHHH------------HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Q 010976 178 TSPSKDALLEEACKKYDEATRLCP---TLHDAFYNW------------AIAISDRAKMRGRTKEAEELWKQATKNYEKAV 242 (496)
Q Consensus 178 ~~~~~~~~~~~A~~~~~~Al~l~P---~~~~a~~~l------------g~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al 242 (496)
+++|+..|+++++++| ++..++..+ |.++.. .|++++|+ ..|++++
T Consensus 87 --------~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~----~~~~~~A~-------~~~~~~~ 147 (359)
T 3ieg_A 87 --------LDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFD----GADYTAAI-------TFLDKIL 147 (359)
T ss_dssp --------HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHH
T ss_pred --------hHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHH----ccCHHHHH-------HHHHHHH
Confidence 9999999999999999 899998888 577777 99999999 8999999
Q ss_pred hcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCC
Q 010976 243 QLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREV 322 (496)
Q Consensus 243 ~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~ 322 (496)
+.+|+++.++.++|.++...|++ ++|+..|+++++++|+++.+++++|.++...|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-------------- 203 (359)
T 3ieg_A 148 EVCVWDAELRELRAECFIKEGEP----------RKAISDLKAASKLKSDNTEAFYKISTLYYQLGD-------------- 203 (359)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTC--------------
T ss_pred HhCCCchHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--------------
Confidence 99999999999999999999999 999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHHhcCCcHHHH
Q 010976 323 SPNELYSQSAIYIAAAHALKPSYSVY 348 (496)
Q Consensus 323 ~~~~~~~~A~~~~~~a~~l~p~~~~y 348 (496)
+..|..+|+++++++|++...
T Consensus 204 -----~~~A~~~~~~a~~~~~~~~~~ 224 (359)
T 3ieg_A 204 -----HELSLSEVRECLKLDQDHKRC 224 (359)
T ss_dssp -----HHHHHHHHHHHHHHCTTCHHH
T ss_pred -----HHHHHHHHHHHHhhCccchHH
Confidence 899999999999999998753
No 31
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.80 E-value=5.3e-18 Score=178.59 Aligned_cols=202 Identities=15% Similarity=0.119 Sum_probs=181.7
Q ss_pred hhhhhhcHHHHHHHHHHhhccc---------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 010976 107 PHQLAEQNNAAMELINSVTGVD---------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDS 177 (496)
Q Consensus 107 ~~~~~~~~~~A~~~~~~~l~~~---------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~ 177 (496)
.+...++++.|+..+.+++... +..+...|++++|+..|+++++.+|+++.++..+|.++...|+
T Consensus 252 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------ 325 (537)
T 3fp2_A 252 FHFLKNNLLDAQVLLQESINLHPTPNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQD------ 325 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------
T ss_pred HHHhcccHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCC------
Confidence 3446788899999999988765 3345567999999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 010976 178 TSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGL 257 (496)
Q Consensus 178 ~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 257 (496)
+++|+..|+++++++|++..+++++|.++.. .|++++|+ ..|+++++.+|+++.+++++|.
T Consensus 326 --------~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~----~g~~~~A~-------~~~~~~~~~~~~~~~~~~~l~~ 386 (537)
T 3fp2_A 326 --------YKNAKEDFQKAQSLNPENVYPYIQLACLLYK----QGKFTESE-------AFFNETKLKFPTLPEVPTFFAE 386 (537)
T ss_dssp --------HHHHHHHHHHHHHHCTTCSHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCTHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCChHHHHHHHH
Confidence 9999999999999999999999999999999 99999999 8899999999999999999999
Q ss_pred HHHHccCcchHHH------------------------------hh----------hhHHHHHHHHHHHHHhcCCCHHHHH
Q 010976 258 ALQELSAIVPARE------------------------------KQ----------TIVRTAISKFRAAIQLQFDFHRAIY 297 (496)
Q Consensus 258 ~l~~~g~~~~A~~------------------------------~~----------~~~~~Ai~~~~~Al~l~P~~~~a~~ 297 (496)
++...|++++|.. .. |++++|+..|+++++++|++..+++
T Consensus 387 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 466 (537)
T 3fp2_A 387 ILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPRSEQAKI 466 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999988821 22 9999999999999999999999999
Q ss_pred HHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Q 010976 298 NLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSAL 352 (496)
Q Consensus 298 ~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al 352 (496)
++|.+|..+|+ +..|..+|+++++++|........+
T Consensus 467 ~l~~~~~~~g~-------------------~~~A~~~~~~al~~~~~~~~~~~~~ 502 (537)
T 3fp2_A 467 GLAQLKLQMEK-------------------IDEAIELFEDSAILARTMDEKLQAT 502 (537)
T ss_dssp HHHHHHHHTTC-------------------HHHHHHHHHHHHHHC--CHHHHHHH
T ss_pred HHHHHHHHhcc-------------------HHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 99999999999 8999999999999999988554433
No 32
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.80 E-value=7.7e-18 Score=155.79 Aligned_cols=167 Identities=15% Similarity=0.089 Sum_probs=156.0
Q ss_pred hhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHH
Q 010976 130 EGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYN 209 (496)
Q Consensus 130 ~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~ 209 (496)
..+...|++++|+..|+++++.+|++..+++.+|.++...|+ +++|+..|++++.++|++..++++
T Consensus 16 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~ 81 (225)
T 2vq2_A 16 MEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKV--------------NDKAQESFRQALSIKPDSAEINNN 81 (225)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCC--------------hHHHHHHHHHHHHhCCCChHHHHH
Confidence 346678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHH
Q 010976 210 WAIAISDRAKMR-GRTKEAEELWKQATKNYEKAVQ--LNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAI 286 (496)
Q Consensus 210 lg~~~~~~~~~~-g~~~eA~~~~~~A~~~~~~Al~--l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al 286 (496)
+|.++.. . |++++|+ ..|+++++ .+|.+..+++++|.++...|++ ++|+..|++++
T Consensus 82 l~~~~~~----~~~~~~~A~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~~~ 140 (225)
T 2vq2_A 82 YGWFLCG----RLNRPAESM-------AYFDKALADPTYPTPYIANLNKGICSAKQGQF----------GLAEAYLKRSL 140 (225)
T ss_dssp HHHHHHT----TTCCHHHHH-------HHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHH
T ss_pred HHHHHHH----hcCcHHHHH-------HHHHHHHcCcCCcchHHHHHHHHHHHHHcCCH----------HHHHHHHHHHH
Confidence 9999999 9 9999999 77888887 6777899999999999999999 99999999999
Q ss_pred HhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCC-cHHHHHH
Q 010976 287 QLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKP-SYSVYSS 350 (496)
Q Consensus 287 ~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p-~~~~y~~ 350 (496)
+.+|++..+++++|.++...|+ +..|..+|++++.++| .+.....
T Consensus 141 ~~~~~~~~~~~~la~~~~~~~~-------------------~~~A~~~~~~~~~~~~~~~~~~~~ 186 (225)
T 2vq2_A 141 AAQPQFPPAFKELARTKMLAGQ-------------------LGDADYYFKKYQSRVEVLQADDLL 186 (225)
T ss_dssp HHSTTCHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred HhCCCCchHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCCCCCHHHHH
Confidence 9999999999999999999999 8999999999999999 7664433
No 33
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.80 E-value=2.8e-18 Score=153.47 Aligned_cols=162 Identities=12% Similarity=0.079 Sum_probs=154.2
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 210 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~l 210 (496)
.+...|++++|+..|+++++.+|.+..+++.+|.++...|+ +++|+..|+++++++|++..+++++
T Consensus 17 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~~ 82 (186)
T 3as5_A 17 SHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGA--------------VDRGTELLERSLADAPDNVKVATVL 82 (186)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 45667999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcC
Q 010976 211 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQF 290 (496)
Q Consensus 211 g~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P 290 (496)
|.++.. .|++++|+ ..|++++..+|.+..+++++|.++...|++ ++|+..|+++++..|
T Consensus 83 a~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~~~~~~~ 141 (186)
T 3as5_A 83 GLTYVQ----VQKYDLAV-------PLLIKVAEANPINFNVRFRLGVALDNLGRF----------DEAIDSFKIALGLRP 141 (186)
T ss_dssp HHHHHH----HTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCT
T ss_pred HHHHHH----hcCHHHHH-------HHHHHHHhcCcHhHHHHHHHHHHHHHcCcH----------HHHHHHHHHHHhcCc
Confidence 999999 99999999 888999999999999999999999999999 999999999999999
Q ss_pred CCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHH
Q 010976 291 DFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 346 (496)
Q Consensus 291 ~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~ 346 (496)
++..+++++|.++...|+ +..|..+++++++++|++.
T Consensus 142 ~~~~~~~~la~~~~~~~~-------------------~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 142 NEGKVHRAIAFSYEQMGR-------------------HEEALPHFKKANELDEGAS 178 (186)
T ss_dssp TCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHHCCC
T ss_pred cchHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHcCCCch
Confidence 999999999999999998 8899999999988877654
No 34
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.79 E-value=8.4e-19 Score=184.11 Aligned_cols=172 Identities=14% Similarity=0.097 Sum_probs=155.4
Q ss_pred CChhhhhhcH-HHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh----
Q 010976 105 NTPHQLAEQN-NAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQES---- 169 (496)
Q Consensus 105 ~~~~~~~~~~-~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~---- 169 (496)
+..+...+++ ++|+..+.+++... +..+..+|++++|+.+|+++++++|+ ..++.++|.+|..+
T Consensus 109 g~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~~~~~~ 187 (474)
T 4abn_A 109 GKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQLQTDS 187 (474)
T ss_dssp HHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTTCCCSC
T ss_pred HHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHHhccCC
Confidence 3344567889 99999999998876 44567789999999999999999999 79999999999998
Q ss_pred -----cCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHH
Q 010976 170 -----ADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMR----GRTKEAEELWKQATKNYEK 240 (496)
Q Consensus 170 -----~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~----g~~~eA~~~~~~A~~~~~~ 240 (496)
|+ +++|+..|+++++++|++..+|+++|.+|...++.. |++++|+ ..|++
T Consensus 188 ~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~-------~~~~~ 246 (474)
T 4abn_A 188 GDEHSRH--------------VMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQAL-------SAYAQ 246 (474)
T ss_dssp HHHHHHH--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH-------HHHHH
T ss_pred hhhhhhh--------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHH-------HHHHH
Confidence 77 999999999999999999999999999999821112 6666666 89999
Q ss_pred HHhcCC---CCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010976 241 AVQLNW---NSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 241 Al~l~P---~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~ 308 (496)
+++++| +++.+++++|.+|..+|++ ++|+..|+++++++|++..++.+++.++..+|+
T Consensus 247 al~~~p~~~~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~ 307 (474)
T 4abn_A 247 AEKVDRKASSNPDLHLNRATLHKYEESY----------GEALEGFSQAAALDPAWPEPQQREQQLLEFLSR 307 (474)
T ss_dssp HHHHCGGGGGCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCcccCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 999999 9999999999999999999 999999999999999999999999999999998
No 35
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.79 E-value=4.4e-18 Score=159.57 Aligned_cols=172 Identities=16% Similarity=0.114 Sum_probs=154.2
Q ss_pred hhhhhcHHHHHHHHHHhhccc-----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCC
Q 010976 108 HQLAEQNNAAMELINSVTGVD-----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLD 176 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~-----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~ 176 (496)
+...+++++|+..+.+++... +.++...|++++|+..|+++++.+|++..+++.+|.+|..+|+
T Consensus 17 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~----- 91 (228)
T 4i17_A 17 ALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKN----- 91 (228)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTC-----
T ss_pred HHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHccc-----
Confidence 456789999999999888765 3456678999999999999999999999999999999999999
Q ss_pred CCCcchhhhHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC--
Q 010976 177 STSPSKDALLEEACKKYDEATRLCPTLH-------DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN-- 247 (496)
Q Consensus 177 ~~~~~~~~~~~~A~~~~~~Al~l~P~~~-------~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~-- 247 (496)
+++|+..|+++++++|++. .+|+++|.++.. +|++++|+ ..|+++++++|+
T Consensus 92 ---------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~----~~~~~~A~-------~~~~~al~~~p~~~ 151 (228)
T 4i17_A 92 ---------NQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQ----AGNIEKAE-------ENYKHATDVTSKKW 151 (228)
T ss_dssp ---------HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHTTSSCHHH
T ss_pred ---------HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHH----hccHHHHH-------HHHHHHHhcCCCcc
Confidence 9999999999999999999 669999999999 99999999 899999999999
Q ss_pred CHHHHHHHHHHHHHccCc--chH---------------HHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 010976 248 SPQALNNWGLALQELSAI--VPA---------------REKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLY 304 (496)
Q Consensus 248 ~~~a~~~lg~~l~~~g~~--~~A---------------~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~ 304 (496)
++.+++++|.+|..+|+. +.+ ....+.+++|+.+|+++++++|++..+...++.+..
T Consensus 152 ~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~i~~ 225 (228)
T 4i17_A 152 KTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKA 225 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 999999999999999886 221 234677899999999999999999999998887754
No 36
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.79 E-value=1.1e-17 Score=172.25 Aligned_cols=194 Identities=14% Similarity=0.106 Sum_probs=176.8
Q ss_pred hhhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 010976 108 HQLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDS 177 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~ 177 (496)
+...++++.|+..+.+++... +..+...|++++|+..|+++++.+|+++.+++.+|.+|...|+
T Consensus 153 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~------ 226 (450)
T 2y4t_A 153 AFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGD------ 226 (450)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTC------
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC------
Confidence 456789999999999988755 3456778999999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHH------------HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcC
Q 010976 178 TSPSKDALLEEACKKYDEATRLCPTLHDAFYNW------------AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN 245 (496)
Q Consensus 178 ~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~l------------g~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~ 245 (496)
+++|+..|++++.++|++...+..+ |.++.. .|++++|+ ..|+++++++
T Consensus 227 --------~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~A~-------~~~~~~l~~~ 287 (450)
T 2y4t_A 227 --------HELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIR----DGRYTDAT-------SKYESVMKTE 287 (450)
T ss_dssp --------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHH----HTCHHHHH-------HHHHHHHHHC
T ss_pred --------HHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHhcC
Confidence 9999999999999999999988777 888988 99999999 8889999999
Q ss_pred CCCH----HHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCC
Q 010976 246 WNSP----QALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPRE 321 (496)
Q Consensus 246 P~~~----~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~ 321 (496)
|+++ .++.++|.++...|++ ++|+..|+++++++|++..+++++|.++...|+
T Consensus 288 p~~~~~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~------------- 344 (450)
T 2y4t_A 288 PSIAEYTVRSKERICHCFSKDEKP----------VEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEM------------- 344 (450)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------
T ss_pred CcchHHHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcC-------------
Confidence 9985 4889999999999999 999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhh
Q 010976 322 VSPNELYSQSAIYIAAAHALKPSYSVYSSALRLV 355 (496)
Q Consensus 322 ~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al~~~ 355 (496)
+..|..+|+++++++|++......+..+
T Consensus 345 ------~~~A~~~~~~al~~~p~~~~~~~~l~~~ 372 (450)
T 2y4t_A 345 ------YDEAIQDYETAQEHNENDQQIREGLEKA 372 (450)
T ss_dssp ------HHHHHHHHHHHHTTSSSCHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 9999999999999999998666665543
No 37
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.79 E-value=1.1e-17 Score=178.81 Aligned_cols=192 Identities=12% Similarity=0.059 Sum_probs=152.7
Q ss_pred hhhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 010976 108 HQLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDS 177 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~ 177 (496)
+...|++++|+..+.+++... +.++.+.|++++|+..|+++++..|++..+++.+|.+|...|+
T Consensus 383 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~------ 456 (597)
T 2xpi_A 383 YLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGN------ 456 (597)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTC------
T ss_pred HHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCC------
Confidence 345566677777666665433 2334556777777777777777777777777777777777777
Q ss_pred CCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc------CCCC-HH
Q 010976 178 TSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL------NWNS-PQ 250 (496)
Q Consensus 178 ~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l------~P~~-~~ 250 (496)
+++|++.|+++++++|++..+|+.+|.+|.. .|++++|+ ..|++++++ +|++ ..
T Consensus 457 --------~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~-------~~~~~~~~~~~~~~~~p~~~~~ 517 (597)
T 2xpi_A 457 --------ILLANEYLQSSYALFQYDPLLLNELGVVAFN----KSDMQTAI-------NHFQNALLLVKKTQSNEKPWAA 517 (597)
T ss_dssp --------HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHHHHSCCCSGGGHH
T ss_pred --------HHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----hCCHHHHH-------HHHHHHHHhhhccccchhhHHH
Confidence 8888888888888888777788888888877 78887777 566666655 6765 89
Q ss_pred HHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHH
Q 010976 251 ALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQ 330 (496)
Q Consensus 251 a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~ 330 (496)
+++++|.+|...|++ ++|+..|+++++++|+++.+++.+|.+|...|+ +.+
T Consensus 518 ~~~~l~~~~~~~g~~----------~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~-------------------~~~ 568 (597)
T 2xpi_A 518 TWANLGHAYRKLKMY----------DAAIDALNQGLLLSTNDANVHTAIALVYLHKKI-------------------PGL 568 (597)
T ss_dssp HHHHHHHHHHHTTCH----------HHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTC-------------------HHH
T ss_pred HHHHHHHHHHHhcCH----------HHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC-------------------HHH
Confidence 999999999999999 999999999999999999999999999999999 899
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHH
Q 010976 331 SAIYIAAAHALKPSYSVYSSALR 353 (496)
Q Consensus 331 A~~~~~~a~~l~p~~~~y~~al~ 353 (496)
|..+|+++++++|++......+.
T Consensus 569 A~~~~~~~l~~~p~~~~~~~~l~ 591 (597)
T 2xpi_A 569 AITHLHESLAISPNEIMASDLLK 591 (597)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCChHHHHHHH
Confidence 99999999999999986655554
No 38
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.79 E-value=1.1e-18 Score=191.48 Aligned_cols=163 Identities=14% Similarity=0.043 Sum_probs=150.4
Q ss_pred hhhcHHHHHHHHHHhh--------ccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcC
Q 010976 110 LAEQNNAAMELINSVT--------GVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESAD 171 (496)
Q Consensus 110 ~~~~~~~A~~~~~~~l--------~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~ 171 (496)
..+++++|+..+.+++ ... +..+..+|++++|+..|+++++++|++..+|+++|.+|..+|+
T Consensus 403 ~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~ 482 (681)
T 2pzi_A 403 VLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGD 482 (681)
T ss_dssp TTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCC
Confidence 4688999999999998 333 3456678999999999999999999999999999999999999
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHH
Q 010976 172 NVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQA 251 (496)
Q Consensus 172 ~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a 251 (496)
+++|++.|+++++++|++..+++++|.+|.. +|++++ + ..|+++++++|++..+
T Consensus 483 --------------~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~----~g~~~~-~-------~~~~~al~~~P~~~~a 536 (681)
T 2pzi_A 483 --------------YDSATKHFTEVLDTFPGELAPKLALAATAEL----AGNTDE-H-------KFYQTVWSTNDGVISA 536 (681)
T ss_dssp --------------HHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH----HTCCCT-T-------CHHHHHHHHCTTCHHH
T ss_pred --------------HHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----cCChHH-H-------HHHHHHHHhCCchHHH
Confidence 9999999999999999999999999999999 999999 9 8999999999999999
Q ss_pred HHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010976 252 LNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 252 ~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~ 308 (496)
++++|.+|..+|++ ++|+..|++|++++|++..+++++|.++...++
T Consensus 537 ~~~lg~~~~~~g~~----------~~A~~~~~~al~l~P~~~~a~~~~~~~~~~~~~ 583 (681)
T 2pzi_A 537 AFGLARARSAEGDR----------VGAVRTLDEVPPTSRHFTTARLTSAVTLLSGRS 583 (681)
T ss_dssp HHHHHHHHHHTTCH----------HHHHHHHHTSCTTSTTHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHcCCH----------HHHHHHHHhhcccCcccHHHHHHHHHHHHccCC
Confidence 99999999999999 999999999999999999999999999977553
No 39
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.78 E-value=5.5e-18 Score=159.16 Aligned_cols=165 Identities=24% Similarity=0.237 Sum_probs=149.2
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 210 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~l 210 (496)
.+...|++++|+..|+++++.+|++..+++.+|.++...|+ +++|+..|+++++++|++..+++.+
T Consensus 32 ~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~l 97 (243)
T 2q7f_A 32 RGSEFGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNE--------------LERALAFYDKALELDSSAATAYYGA 97 (243)
T ss_dssp ----------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHhhCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHcCCcchHHHHHH
Confidence 35567999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcC
Q 010976 211 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQF 290 (496)
Q Consensus 211 g~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P 290 (496)
|.++.. .|++++|+ ..|+++++.+|.+..+++++|.++...|++ ++|+..|+++++++|
T Consensus 98 a~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~~~~~~~ 156 (243)
T 2q7f_A 98 GNVYVV----KEMYKEAK-------DMFEKALRAGMENGDLFYMLGTVLVKLEQP----------KLALPYLQRAVELNE 156 (243)
T ss_dssp HHHHHH----TTCHHHHH-------HHHHHHHHHTCCSHHHHHHHHHHHHHTSCH----------HHHHHHHHHHHHHCT
T ss_pred HHHHHH----hccHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHhccH----------HHHHHHHHHHHHhCC
Confidence 999999 99999999 889999999999999999999999999999 999999999999999
Q ss_pred CCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHH
Q 010976 291 DFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYS 349 (496)
Q Consensus 291 ~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~ 349 (496)
++..+++++|.++...|+ +..|..+|.+++..+|.+....
T Consensus 157 ~~~~~~~~l~~~~~~~~~-------------------~~~A~~~~~~~~~~~~~~~~~~ 196 (243)
T 2q7f_A 157 NDTEARFQFGMCLANEGM-------------------LDEALSQFAAVTEQDPGHADAF 196 (243)
T ss_dssp TCHHHHHHHHHHHHHHTC-------------------CHHHHHHHHHHHHHCTTCHHHH
T ss_pred ccHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCcccHHHH
Confidence 999999999999999998 8899999999999999877443
No 40
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.78 E-value=1.4e-17 Score=157.79 Aligned_cols=166 Identities=19% Similarity=0.158 Sum_probs=156.8
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 210 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~l 210 (496)
.+...|++++|+..|+++++.+|++..+++.+|.++...|+ +++|++.|+++++++|++..+++++
T Consensus 46 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~l 111 (252)
T 2ho1_A 46 GYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEME--------------PKLADEEYRKALASDSRNARVLNNY 111 (252)
T ss_dssp HHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHCcCcHHHHHHH
Confidence 35567999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHh
Q 010976 211 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQ--LNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 288 (496)
Q Consensus 211 g~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~--l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l 288 (496)
|.++.. .|++++|+ ..|++++. .+|.+..+++++|.++...|++ ++|+..|++++++
T Consensus 112 a~~~~~----~g~~~~A~-------~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~~~~~ 170 (252)
T 2ho1_A 112 GGFLYE----QKRYEEAY-------QRLLEASQDTLYPERSRVFENLGLVSLQMKKP----------AQAKEYFEKSLRL 170 (252)
T ss_dssp HHHHHH----TTCHHHHH-------HHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHH
T ss_pred HHHHHH----HhHHHHHH-------HHHHHHHhCccCcccHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhc
Confidence 999999 99999999 78888888 8899999999999999999999 9999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHH
Q 010976 289 QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSS 350 (496)
Q Consensus 289 ~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~ 350 (496)
+|++..+++.+|.++...|+ +..|..+|++++...|.+.....
T Consensus 171 ~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~~~~~~~~~~~~~~ 213 (252)
T 2ho1_A 171 NRNQPSVALEMADLLYKERE-------------------YVPARQYYDLFAQGGGQNARSLL 213 (252)
T ss_dssp CSCCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHTTSCCCHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCcCcHHHHH
Confidence 99999999999999999999 89999999999999998774433
No 41
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.78 E-value=1.8e-17 Score=170.70 Aligned_cols=188 Identities=17% Similarity=0.109 Sum_probs=171.5
Q ss_pred hhhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 010976 108 HQLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDS 177 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~ 177 (496)
+...|+++.|+..+.+++... +.++...|++++|+..|+++++.+|++..+++.+|.+|..+|+
T Consensus 36 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~------ 109 (450)
T 2y4t_A 36 LLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGK------ 109 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------
T ss_pred HHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCC------
Confidence 456789999999999988754 3456778999999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHHHHHHHHHHhCCCCH---HHHHHH------------HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Q 010976 178 TSPSKDALLEEACKKYDEATRLCPTLH---DAFYNW------------AIAISDRAKMRGRTKEAEELWKQATKNYEKAV 242 (496)
Q Consensus 178 ~~~~~~~~~~~A~~~~~~Al~l~P~~~---~a~~~l------------g~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al 242 (496)
+++|+..|+++++++|++. .++..+ |.++.. .|++++|+ ..|++++
T Consensus 110 --------~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~----~~~~~~A~-------~~~~~~~ 170 (450)
T 2y4t_A 110 --------LDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFG----SGDYTAAI-------AFLDKIL 170 (450)
T ss_dssp --------HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HTCHHHHH-------HHHHHHH
T ss_pred --------HHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHH
Confidence 9999999999999999998 777666 555777 88888888 8899999
Q ss_pred hcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCC
Q 010976 243 QLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREV 322 (496)
Q Consensus 243 ~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~ 322 (496)
+.+|.+..+++++|.+|...|++ ++|+..|+++++++|+++.+++++|.+|...|+
T Consensus 171 ~~~~~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-------------- 226 (450)
T 2y4t_A 171 EVCVWDAELRELRAECFIKEGEP----------RKAISDLKAASKLKNDNTEAFYKISTLYYQLGD-------------- 226 (450)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCG----------GGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTC--------------
T ss_pred HhCCCChHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--------------
Confidence 99999999999999999999999 999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHHhcCCcHHHHH
Q 010976 323 SPNELYSQSAIYIAAAHALKPSYSVYS 349 (496)
Q Consensus 323 ~~~~~~~~A~~~~~~a~~l~p~~~~y~ 349 (496)
+..|..+|++++.++|++....
T Consensus 227 -----~~~A~~~~~~~~~~~p~~~~~~ 248 (450)
T 2y4t_A 227 -----HELSLSEVRECLKLDQDHKRCF 248 (450)
T ss_dssp -----HHHHHHHHHHHHHHCTTCHHHH
T ss_pred -----HHHHHHHHHHHHHhCCChHHHH
Confidence 8899999999999999887543
No 42
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.78 E-value=2.3e-19 Score=158.23 Aligned_cols=136 Identities=15% Similarity=0.101 Sum_probs=121.6
Q ss_pred HHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Q 010976 162 WALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKA 241 (496)
Q Consensus 162 lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~A 241 (496)
||.++...|+ +++|+..|++++..+|+++.+++++|.+|.. +|++++|+ ..|+++
T Consensus 3 LG~~~~~~~~--------------~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~----~~~~~~A~-------~~~~~a 57 (150)
T 4ga2_A 3 LGSMRRSKAD--------------VERYIASVQGSTPSPRQKSIKGFYFAKLYYE----AKEYDLAK-------KYICTY 57 (150)
T ss_dssp ----CCCHHH--------------HHHHHHHHHHHSCSHHHHHTTHHHHHHHHHH----TTCHHHHH-------HHHHHH
T ss_pred hHHHHHHcCh--------------HHHHHHHHHHhcccCcccHHHHHHHHHHHHH----cCCHHHHH-------HHHHHH
Confidence 5666666666 9999999999999999999999999999999 99999999 899999
Q ss_pred HhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCC
Q 010976 242 VQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPRE 321 (496)
Q Consensus 242 l~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~ 321 (496)
++++|+++.+|+++|.+|..+|++ ++|+.+|+++++++|+++.+++++|.+|..+|+
T Consensus 58 l~~~p~~~~a~~~lg~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~------------- 114 (150)
T 4ga2_A 58 INVQERDPKAHRFLGLLYELEENT----------DKAVECYRRSVELNPTQKDLVLKIAELLCKNDV------------- 114 (150)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCS-------------
T ss_pred HHhCCCCHHHHHHHHHHHHHcCch----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-------------
Confidence 999999999999999999999999 999999999999999999999999999999998
Q ss_pred CCcHHHHHHHHHH-HHHHHhcCCcHHHHHHH
Q 010976 322 VSPNELYSQSAIY-IAAAHALKPSYSVYSSA 351 (496)
Q Consensus 322 ~~~~~~~~~A~~~-~~~a~~l~p~~~~y~~a 351 (496)
+.+++.+ ++++++++|+++.....
T Consensus 115 ------~~~aa~~~~~~al~l~P~~~~~~~l 139 (150)
T 4ga2_A 115 ------TDGRAKYWVERAAKLFPGSPAVYKL 139 (150)
T ss_dssp ------SSSHHHHHHHHHHHHSTTCHHHHHH
T ss_pred ------hHHHHHHHHHHHHHhCcCCHHHHHH
Confidence 5555554 68999999999855443
No 43
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.78 E-value=5.5e-17 Score=158.94 Aligned_cols=173 Identities=17% Similarity=0.123 Sum_probs=160.8
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 210 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~l 210 (496)
.+...|++++|+..|+++++.+|++..++..+|.++...|+ +++|+..|+++++++|++..+++.+
T Consensus 30 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~l 95 (327)
T 3cv0_A 30 SMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEK--------------DGLAIIALNHARMLDPKDIAVHAAL 95 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHhcCcCCHHHHHHH
Confidence 35567999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHH------------------------------------------HHHHHHHHHhcCCCC
Q 010976 211 AIAISDRAKMRGRTKEAEELWKQ------------------------------------------ATKNYEKAVQLNWNS 248 (496)
Q Consensus 211 g~~~~~~~~~~g~~~eA~~~~~~------------------------------------------A~~~~~~Al~l~P~~ 248 (496)
|.++.. .|++++|++.|++ |+..|+++++.+|.+
T Consensus 96 a~~~~~----~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 171 (327)
T 3cv0_A 96 AVSHTN----EHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPND 171 (327)
T ss_dssp HHHHHH----TTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHH----cCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCC
Confidence 999999 9999999876644 556689999999999
Q ss_pred HHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHH
Q 010976 249 PQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELY 328 (496)
Q Consensus 249 ~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~ 328 (496)
..+++.+|.++...|++ ++|+..|+++++++|++..+++++|.++...|+ +
T Consensus 172 ~~~~~~la~~~~~~~~~----------~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------------------~ 222 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNY----------DSAAANLRRAVELRPDDAQLWNKLGATLANGNR-------------------P 222 (327)
T ss_dssp HHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------H
T ss_pred HHHHHHHHHHHHHhccH----------HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC-------------------H
Confidence 99999999999999999 999999999999999999999999999999998 8
Q ss_pred HHHHHHHHHHHhcCCcHHHHHH
Q 010976 329 SQSAIYIAAAHALKPSYSVYSS 350 (496)
Q Consensus 329 ~~A~~~~~~a~~l~p~~~~y~~ 350 (496)
.+|..+|+++++++|.+.....
T Consensus 223 ~~A~~~~~~a~~~~~~~~~~~~ 244 (327)
T 3cv0_A 223 QEALDAYNRALDINPGYVRVMY 244 (327)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHH
Confidence 9999999999999998774333
No 44
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.78 E-value=1.7e-17 Score=162.89 Aligned_cols=184 Identities=10% Similarity=0.012 Sum_probs=150.3
Q ss_pred hhhcHHHHHHHHHHhhccc------------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 010976 110 LAEQNNAAMELINSVTGVD------------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDS 177 (496)
Q Consensus 110 ~~~~~~~A~~~~~~~l~~~------------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~ 177 (496)
..++.+.|+..+.+++... +..+...|++++|+..|++ |++.+++..+|.+|..+|+
T Consensus 77 ~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g~------ 145 (291)
T 3mkr_A 77 SHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-----GDSLECMAMTVQILLKLDR------ 145 (291)
T ss_dssp CSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTTC------
T ss_pred CCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCCC------
Confidence 4566788888887766431 3445667889999988887 8888899999999999888
Q ss_pred CCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 010976 178 TSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGL 257 (496)
Q Consensus 178 ~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 257 (496)
+++|++.|+++++++|++... +++.++...+...|++++|+ ..|+++++.+|+++.+++++|.
T Consensus 146 --------~~~A~~~l~~~~~~~p~~~~~--~l~~a~~~l~~~~~~~~eA~-------~~~~~~l~~~p~~~~~~~~la~ 208 (291)
T 3mkr_A 146 --------LDLARKELKKMQDQDEDATLT--QLATAWVSLAAGGEKLQDAY-------YIFQEMADKCSPTLLLLNGQAA 208 (291)
T ss_dssp --------HHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHCTTHHHHHH-------HHHHHHHHHSCCCHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHhhCcCcHHH--HHHHHHHHHHhCchHHHHHH-------HHHHHHHHhCCCcHHHHHHHHH
Confidence 999999999999999887643 33333322111157788887 8999999999999999999999
Q ss_pred HHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHH-HHHHHH
Q 010976 258 ALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQ-SAIYIA 336 (496)
Q Consensus 258 ~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~-A~~~~~ 336 (496)
++..+|++ ++|+..|+++++++|+++.+++|+|.++..+|+ +.+ +..+++
T Consensus 209 ~~~~~g~~----------~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~-------------------~~eaa~~~~~ 259 (291)
T 3mkr_A 209 CHMAQGRW----------EAAEGVLQEALDKDSGHPETLINLVVLSQHLGK-------------------PPEVTNRYLS 259 (291)
T ss_dssp HHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------CHHHHHHHHH
T ss_pred HHHHcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-------------------CHHHHHHHHH
Confidence 99999999 999999999999999999999999999999998 444 568999
Q ss_pred HHHhcCCcHHHHHH
Q 010976 337 AAHALKPSYSVYSS 350 (496)
Q Consensus 337 ~a~~l~p~~~~y~~ 350 (496)
++++++|+++....
T Consensus 260 ~~~~~~P~~~~~~d 273 (291)
T 3mkr_A 260 QLKDAHRSHPFIKE 273 (291)
T ss_dssp HHHHHCTTCHHHHH
T ss_pred HHHHhCCCChHHHH
Confidence 99999999995443
No 45
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.77 E-value=7e-17 Score=154.51 Aligned_cols=193 Identities=17% Similarity=0.168 Sum_probs=159.6
Q ss_pred hhhhcHHHHHHHHHHhhccc--------------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCC
Q 010976 109 QLAEQNNAAMELINSVTGVD--------------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVS 174 (496)
Q Consensus 109 ~~~~~~~~A~~~~~~~l~~~--------------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~ 174 (496)
...+++++|+..+.+++... +..+...|++++|+..|+++++++|+++.++..+|.++...|+
T Consensus 16 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~--- 92 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN--- 92 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC---
T ss_pred CccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccC---
Confidence 34578888999888888751 3456678999999999999999999999999999999999999
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Q 010976 175 LDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNN 254 (496)
Q Consensus 175 ~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~ 254 (496)
+++|+.+|+++++++|++..+++++|.+|.. .|++++|+ ..|+++++++|++...+..
T Consensus 93 -----------~~~A~~~~~~al~~~~~~~~~~~~la~~~~~----~g~~~~A~-------~~~~~a~~~~~~~~~~~~~ 150 (275)
T 1xnf_A 93 -----------FDAAYEAFDSVLELDPTYNYAHLNRGIALYY----GGRDKLAQ-------DDLLAFYQDDPNDPFRSLW 150 (275)
T ss_dssp -----------HHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHH
T ss_pred -----------HHHHHHHHHHHHhcCccccHHHHHHHHHHHH----hccHHHHH-------HHHHHHHHhCCCChHHHHH
Confidence 9999999999999999999999999999999 99999999 7888888899999877766
Q ss_pred HHHHHHHccCcchHHH-----------------------hhhhHHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHHcc
Q 010976 255 WGLALQELSAIVPARE-----------------------KQTIVRTAISKFRAAIQLQFD----FHRAIYNLGTVLYGLA 307 (496)
Q Consensus 255 lg~~l~~~g~~~~A~~-----------------------~~~~~~~Ai~~~~~Al~l~P~----~~~a~~~lg~~~~~~g 307 (496)
++.+ ...|++++|.. ..++.++|+..+++++...|. +..+++++|.++..+|
T Consensus 151 ~~~~-~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g 229 (275)
T 1xnf_A 151 LYLA-EQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLG 229 (275)
T ss_dssp HHHH-HHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHH-HHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcC
Confidence 6654 55688854411 223345666666666655553 3678888888888888
Q ss_pred hhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHH
Q 010976 308 EDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 346 (496)
Q Consensus 308 ~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~ 346 (496)
+ +.+|..+|++++.++|.+.
T Consensus 230 ~-------------------~~~A~~~~~~al~~~p~~~ 249 (275)
T 1xnf_A 230 D-------------------LDSATALFKLAVANNVHNF 249 (275)
T ss_dssp C-------------------HHHHHHHHHHHHTTCCTTC
T ss_pred C-------------------HHHHHHHHHHHHhCCchhH
Confidence 8 8899999999999999654
No 46
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.77 E-value=1.1e-17 Score=160.54 Aligned_cols=187 Identities=13% Similarity=0.079 Sum_probs=154.3
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC---H
Q 010976 131 GRSRQRILTFAAKRYANAIERNPED---YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL---H 204 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~---~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~---~ 204 (496)
.++..|++++|+..|+++++.+|++ +.+++.+|.+|+.+|+ +++|+..|+++++++|++ .
T Consensus 24 ~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~--------------~~~A~~~~~~~l~~~p~~~~~~ 89 (261)
T 3qky_A 24 EFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKE--------------YLLAASEYERFIQIYQIDPRVP 89 (261)
T ss_dssp HHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCc--------------HHHHHHHHHHHHHHCCCCchhH
Confidence 3556899999999999999999999 9999999999999999 999999999999998854 6
Q ss_pred HHHHHHHHHHHHH----HHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHH-----------------HHHHHHHHHcc
Q 010976 205 DAFYNWAIAISDR----AKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQAL-----------------NNWGLALQELS 263 (496)
Q Consensus 205 ~a~~~lg~~~~~~----~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~-----------------~~lg~~l~~~g 263 (496)
.+++++|.++... ...+|++++|+ ..|++++..+|++..+. +++|.+|..+|
T Consensus 90 ~a~~~lg~~~~~~~~~~~~~~~~~~~A~-------~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g 162 (261)
T 3qky_A 90 QAEYERAMCYYKLSPPYELDQTDTRKAI-------EAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRE 162 (261)
T ss_dssp HHHHHHHHHHHHHCCCTTSCCHHHHHHH-------HHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcccccccchhHHHHH-------HHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 7899999998640 00035566666 89999999999987666 88999999999
Q ss_pred CcchHHHhhhhHHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHh
Q 010976 264 AIVPAREKQTIVRTAISKFRAAIQLQFD---FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHA 340 (496)
Q Consensus 264 ~~~~A~~~~~~~~~Ai~~~~~Al~l~P~---~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 340 (496)
++ ++|+..|+++++..|+ ...+++++|.+|..+|...... .....+.+|..+|+++++
T Consensus 163 ~~----------~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~---------~~~~~~~~A~~~~~~~~~ 223 (261)
T 3qky_A 163 LY----------EAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRA---------RQPERYRRAVELYERLLQ 223 (261)
T ss_dssp CH----------HHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGG---------GHHHHHHHHHHHHHHHHH
T ss_pred CH----------HHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhh---------cccchHHHHHHHHHHHHH
Confidence 99 9999999999999998 5679999999999885411000 011238999999999999
Q ss_pred cCCcHHHHHHHHHhhhc
Q 010976 341 LKPSYSVYSSALRLVRS 357 (496)
Q Consensus 341 l~p~~~~y~~al~~~~~ 357 (496)
..|+.+.+..+...+..
T Consensus 224 ~~p~~~~~~~a~~~l~~ 240 (261)
T 3qky_A 224 IFPDSPLLRTAEELYTR 240 (261)
T ss_dssp HCTTCTHHHHHHHHHHH
T ss_pred HCCCChHHHHHHHHHHH
Confidence 99999866666655443
No 47
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.77 E-value=8.3e-18 Score=161.11 Aligned_cols=160 Identities=16% Similarity=0.134 Sum_probs=118.0
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC----HHH
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL----HDA 206 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~----~~a 206 (496)
.+...|++++|+..|+++++.+|++..+++.+|.++..+|+ +++|+..|++++. .|.+ ..+
T Consensus 12 ~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~--------------~~~A~~~~~~a~~-~~~~~~~~~~~ 76 (272)
T 3u4t_A 12 FLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAK--------------YDLAQKDIETYFS-KVNATKAKSAD 76 (272)
T ss_dssp HHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTC--------------HHHHHHHHHHHHT-TSCTTTCCHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhh--------------HHHHHHHHHHHHh-ccCchhHHHHH
Confidence 35556777777777777777777777777777777777777 7777777777777 3332 445
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHH
Q 010976 207 FYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAI 286 (496)
Q Consensus 207 ~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al 286 (496)
++++|.++.. +|++++|+ ..|+++++++|+++.++.++|.++..+|++ ++|+..|++++
T Consensus 77 ~~~lg~~~~~----~~~~~~A~-------~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~al 135 (272)
T 3u4t_A 77 FEYYGKILMK----KGQDSLAI-------QQYQAAVDRDTTRLDMYGQIGSYFYNKGNF----------PLAIQYMEKQI 135 (272)
T ss_dssp HHHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCTHHHHHHHHHHHHTTCH----------HHHHHHHGGGC
T ss_pred HHHHHHHHHH----cccHHHHH-------HHHHHHHhcCcccHHHHHHHHHHHHHccCH----------HHHHHHHHHHh
Confidence 7777777777 77777777 677777777777777777777777777777 77777777777
Q ss_pred HhcCCCHHHHHHHH-HHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHH
Q 010976 287 QLQFDFHRAIYNLG-TVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 346 (496)
Q Consensus 287 ~l~P~~~~a~~~lg-~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~ 346 (496)
+++|+++.+++++| .++.. ++ +..|..+|+++++++|++.
T Consensus 136 ~~~~~~~~~~~~l~~~~~~~-~~-------------------~~~A~~~~~~a~~~~p~~~ 176 (272)
T 3u4t_A 136 RPTTTDPKVFYELGQAYYYN-KE-------------------YVKADSSFVKVLELKPNIY 176 (272)
T ss_dssp CSSCCCHHHHHHHHHHHHHT-TC-------------------HHHHHHHHHHHHHHSTTCH
T ss_pred hcCCCcHHHHHHHHHHHHHH-HH-------------------HHHHHHHHHHHHHhCccch
Confidence 77777777777777 44443 34 6777777777777777765
No 48
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.76 E-value=7.6e-18 Score=165.10 Aligned_cols=178 Identities=9% Similarity=0.044 Sum_probs=148.9
Q ss_pred hcHHHHHHHHHHhhccchhhhHhhccHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHhcCCCCCCCCCcchhhh
Q 010976 112 EQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPE------DYDALYNWALVLQESADNVSLDSTSPSKDAL 185 (496)
Q Consensus 112 ~~~~~A~~~~~~~l~~~~~~~~~~g~~~~Ai~~~~~al~~~P~------~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~ 185 (496)
+++++|+..+.++. ..+..+|++++|+.+|++++.+.+. .+.++.++|.+|..+|+
T Consensus 31 ~~~~~A~~~~~~a~----~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~-------------- 92 (292)
T 1qqe_A 31 YKFEEAADLCVQAA----TIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGN-------------- 92 (292)
T ss_dssp HHHHHHHHHHHHHH----HHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--------------
T ss_pred ccHHHHHHHHHHHH----HHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCC--------------
Confidence 36899999998874 3456689999999999999998532 26799999999999999
Q ss_pred HHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHhcCCCC------HHHH
Q 010976 186 LEEACKKYDEATRLCPTL------HDAFYNWAIAISDRAKMR-GRTKEAEELWKQATKNYEKAVQLNWNS------PQAL 252 (496)
Q Consensus 186 ~~~A~~~~~~Al~l~P~~------~~a~~~lg~~~~~~~~~~-g~~~eA~~~~~~A~~~~~~Al~l~P~~------~~a~ 252 (496)
+++|+.+|++|+++.|.. ..++.++|.+|.. . |++++|+ .+|++++++.|.+ ..++
T Consensus 93 ~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~----~lg~~~~A~-------~~~~~Al~~~~~~~~~~~~~~~~ 161 (292)
T 1qqe_A 93 SVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILEN----DLHDYAKAI-------DCYELAGEWYAQDQSVALSNKCF 161 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCCHHHHH-------HHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH----hhcCHHHHH-------HHHHHHHHHHHhCCChHHHHHHH
Confidence 999999999999998754 5689999999998 8 9999999 5555555555433 5689
Q ss_pred HHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHH-------HHHHHHHHHHHcchhHHhccCCCCCCCCCcH
Q 010976 253 NNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHR-------AIYNLGTVLYGLAEDTLRTGGTVNPREVSPN 325 (496)
Q Consensus 253 ~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~-------a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~ 325 (496)
+++|.++..+|++ ++|+..|++++++.|++.. +++++|.++..+|+
T Consensus 162 ~~lg~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~----------------- 214 (292)
T 1qqe_A 162 IKCADLKALDGQY----------IEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATD----------------- 214 (292)
T ss_dssp HHHHHHHHHTTCH----------HHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTC-----------------
T ss_pred HHHHHHHHHhCCH----------HHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCC-----------------
Confidence 9999999999999 9999999999999987653 68999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCcHHH
Q 010976 326 ELYSQSAIYIAAAHALKPSYSV 347 (496)
Q Consensus 326 ~~~~~A~~~~~~a~~l~p~~~~ 347 (496)
+..|..+|++++.++|.+..
T Consensus 215 --~~~A~~~~~~al~l~p~~~~ 234 (292)
T 1qqe_A 215 --AVAAARTLQEGQSEDPNFAD 234 (292)
T ss_dssp --HHHHHHHHHGGGCC------
T ss_pred --HHHHHHHHHHHHhhCCCCCC
Confidence 89999999999999998764
No 49
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.76 E-value=1.7e-18 Score=153.13 Aligned_cols=123 Identities=17% Similarity=0.042 Sum_probs=115.7
Q ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 010976 136 RILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAIS 215 (496)
Q Consensus 136 g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~ 215 (496)
+++-.+-..|++++.++|+++++++++|.+++.+|+ +++|+..|++++.++|+++.+|+++|.+|.
T Consensus 16 ~~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~--------------~~eA~~~~~~al~~~P~~~~~~~~lg~~~~ 81 (151)
T 3gyz_A 16 IDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGR--------------IEEAEVFFRFLCIYDFYNVDYIMGLAAIYQ 81 (151)
T ss_dssp HHHHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 334445567888999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCH
Q 010976 216 DRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH 293 (496)
Q Consensus 216 ~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~ 293 (496)
. +|++++|+ .+|+++++++|+++.+|+++|.+|..+|++ ++|+.+|++++++.|+..
T Consensus 82 ~----~g~~~~Ai-------~~~~~al~l~P~~~~~~~~lg~~~~~lg~~----------~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 82 I----KEQFQQAA-------DLYAVAFALGKNDYTPVFHTGQCQLRLKAP----------LKAKECFELVIQHSNDEK 138 (151)
T ss_dssp H----TTCHHHHH-------HHHHHHHHHSSSCCHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCCCHH
T ss_pred H----HccHHHHH-------HHHHHHHhhCCCCcHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCHH
Confidence 9 99999999 899999999999999999999999999999 999999999999999865
No 50
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.76 E-value=4.4e-17 Score=159.86 Aligned_cols=183 Identities=14% Similarity=0.065 Sum_probs=167.0
Q ss_pred hhhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc-CCCCCC
Q 010976 108 HQLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESA-DNVSLD 176 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~-~~~~~~ 176 (496)
+...|+++.|+..+.+++... ...+...|++++|+..|+++++.+|+++.+++.+|.++...| +
T Consensus 32 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----- 106 (330)
T 3hym_B 32 HYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHK----- 106 (330)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSC-----
T ss_pred HHHcCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhh-----
Confidence 445699999999999988766 344567899999999999999999999999999999999999 8
Q ss_pred CCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 010976 177 STSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWG 256 (496)
Q Consensus 177 ~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg 256 (496)
+++|+.+|+++++++|++..+++.+|.++.. .|++++|+ ..|+++++++|++..+++++|
T Consensus 107 ---------~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~-------~~~~~a~~~~~~~~~~~~~l~ 166 (330)
T 3hym_B 107 ---------NEHARRYLSKATTLEKTYGPAWIAYGHSFAV----ESEHDQAM-------AAYFTAAQLMKGCHLPMLYIG 166 (330)
T ss_dssp ---------HHHHHHHHHHHHTTCTTCTHHHHHHHHHHHH----HTCHHHHH-------HHHHHHHHHTTTCSHHHHHHH
T ss_pred ---------HHHHHHHHHHHHHhCCccHHHHHHHHHHHHH----ccCHHHHH-------HHHHHHHHhccccHHHHHHHH
Confidence 9999999999999999999999999999999 99999999 899999999999999999999
Q ss_pred HHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHH
Q 010976 257 LALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIA 336 (496)
Q Consensus 257 ~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~ 336 (496)
.++...|++ ++|+..|+++++++|+++.+++++|.++...|+ +.+|..+|+
T Consensus 167 ~~~~~~~~~----------~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~-------------------~~~A~~~~~ 217 (330)
T 3hym_B 167 LEYGLTNNS----------KLAERFFSQALSIAPEDPFVMHEVGVVAFQNGE-------------------WKTAEKWFL 217 (330)
T ss_dssp HHHHHTTCH----------HHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHH
T ss_pred HHHHHHhhH----------HHHHHHHHHHHHhCCCChHHHHHHHHHHHHccc-------------------HHHHHHHHH
Confidence 999999999 999999999999999999999999999999998 889999988
Q ss_pred HHHhcCCc
Q 010976 337 AAHALKPS 344 (496)
Q Consensus 337 ~a~~l~p~ 344 (496)
+++.+.+.
T Consensus 218 ~a~~~~~~ 225 (330)
T 3hym_B 218 DALEKIKA 225 (330)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhhh
Confidence 88876543
No 51
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.76 E-value=1.7e-17 Score=177.78 Aligned_cols=157 Identities=17% Similarity=0.024 Sum_probs=131.2
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010976 135 QRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAI 214 (496)
Q Consensus 135 ~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~ 214 (496)
.|++++|+..|+++++++|++..+++++|.++..+|+ +++|++.|+++++++|++..+++++|.+|
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 67 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGD--------------TTAGEMAVQRGLALHPGHPEAVARLGRVR 67 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHTTSTTCHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHH
Q 010976 215 SDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHR 294 (496)
Q Consensus 215 ~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~ 294 (496)
.. +|++++|+ ..|+++++++|++..+++++|.+|..+|++ ++|+..|+++++++|++..
T Consensus 68 ~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~~p~~~~ 126 (568)
T 2vsy_A 68 WT----QQRHAEAA-------VLLQQASDAAPEHPGIALWLGHALEDAGQA----------EAAAAAYTRAHQLLPEEPY 126 (568)
T ss_dssp HH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHH
T ss_pred HH----CCCHHHHH-------HHHHHHHhcCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCHH
Confidence 99 99999999 899999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHHHc---chhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcH
Q 010976 295 AIYNLGTVLYGL---AEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 345 (496)
Q Consensus 295 a~~~lg~~~~~~---g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~ 345 (496)
+++++|.++..+ |+ +.+|..+|+++++.+|..
T Consensus 127 ~~~~l~~~~~~~~~~g~-------------------~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 127 ITAQLLNWRRRLCDWRA-------------------LDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp HHHHHHHHHHHTTCCTT-------------------HHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHhhcccc-------------------HHHHHHHHHHHHhcCCcc
Confidence 999999999999 87 788999999999998874
No 52
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.75 E-value=1.1e-16 Score=171.19 Aligned_cols=165 Identities=19% Similarity=0.193 Sum_probs=111.0
Q ss_pred hhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010976 134 RQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIA 213 (496)
Q Consensus 134 ~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~ 213 (496)
+.|++++|+..|+++++++|++..+|+.+|.+|...|+ +++|++.|+++++++|++..+++.+|.+
T Consensus 385 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 450 (597)
T 2xpi_A 385 CVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGE--------------HDQAISAYTTAARLFQGTHLPYLFLGMQ 450 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHTTTTCSHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 34444444444444444444444444444444444444 4444444444444444444444444444
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHh-----
Q 010976 214 ISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL----- 288 (496)
Q Consensus 214 ~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l----- 288 (496)
|.. .|++++|+ ..|+++++++|.++.+++++|.+|...|++ ++|+..|++++++
T Consensus 451 ~~~----~g~~~~A~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~~~~~~~~~~ 509 (597)
T 2xpi_A 451 HMQ----LGNILLAN-------EYLQSSYALFQYDPLLLNELGVVAFNKSDM----------QTAINHFQNALLLVKKTQ 509 (597)
T ss_dssp HHH----HTCHHHHH-------HHHHHHHHHCCCCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHSC
T ss_pred HHH----cCCHHHHH-------HHHHHHHHhCCCChHHHHHHHHHHHHhCCH----------HHHHHHHHHHHHhhhccc
Confidence 444 44444444 677777777777777777777777777777 9999999999999
Q ss_pred -cCCC-HHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Q 010976 289 -QFDF-HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSAL 352 (496)
Q Consensus 289 -~P~~-~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al 352 (496)
+|++ ..+++++|.+|...|+ +.+|..+|+++++++|++......+
T Consensus 510 ~~p~~~~~~~~~l~~~~~~~g~-------------------~~~A~~~~~~~~~~~p~~~~~~~~l 556 (597)
T 2xpi_A 510 SNEKPWAATWANLGHAYRKLKM-------------------YDAAIDALNQGLLLSTNDANVHTAI 556 (597)
T ss_dssp CCSGGGHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHSSCCHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHhcC-------------------HHHHHHHHHHHHHhCCCChHHHHHH
Confidence 6665 7899999999999999 8999999999999999877443333
No 53
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.75 E-value=2.6e-18 Score=151.99 Aligned_cols=128 Identities=12% Similarity=0.115 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCc
Q 010976 186 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 265 (496)
Q Consensus 186 ~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 265 (496)
+-.+-..|+++++++|++..+++++|.++.. +|++++|+ ..|++++.++|+++.+|+++|.+|..+|++
T Consensus 18 ~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~----~g~~~eA~-------~~~~~al~~~P~~~~~~~~lg~~~~~~g~~ 86 (151)
T 3gyz_A 18 AINSGATLKDINAIPDDMMDDIYSYAYDFYN----KGRIEEAE-------VFFRFLCIYDFYNVDYIMGLAAIYQIKEQF 86 (151)
T ss_dssp HHHTSCCTGGGCCSCHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHCCCCHHHHhCCCHHHHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHHccH
Confidence 5556667889999999999999999999999 99999999 899999999999999999999999999999
Q ss_pred chHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcH
Q 010976 266 VPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 345 (496)
Q Consensus 266 ~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~ 345 (496)
++|+.+|+++++++|+++.+++++|.+|..+|+ +.+|..+|++++++.|+.
T Consensus 87 ----------~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~-------------------~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 87 ----------QQAADLYAVAFALGKNDYTPVFHTGQCQLRLKA-------------------PLKAKECFELVIQHSNDE 137 (151)
T ss_dssp ----------HHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHCCCH
T ss_pred ----------HHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCCCH
Confidence 999999999999999999999999999999999 999999999999999998
Q ss_pred HHHHHHHH
Q 010976 346 SVYSSALR 353 (496)
Q Consensus 346 ~~y~~al~ 353 (496)
+.-..+-.
T Consensus 138 ~~~~~A~~ 145 (151)
T 3gyz_A 138 KLKIKAQS 145 (151)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 85444433
No 54
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.74 E-value=1.6e-17 Score=141.93 Aligned_cols=120 Identities=18% Similarity=0.219 Sum_probs=112.1
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhh
Q 010976 195 EATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTI 274 (496)
Q Consensus 195 ~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~ 274 (496)
++..++|+.+.++.++|.+|+. .|++++|+ ..|+++++++|.++.+|+++|.+|..+|++
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~~~~~~~~~~~~--------- 63 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFK----KGDYPTAM-------RHYNEAVKRDPENAILYSNRAACLTKLMEF--------- 63 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH---------
T ss_pred HHHHHCHHHHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCCHHHHHHHhhHHHhhccH---------
Confidence 4566899999999999999999 99999999 899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHHHHh
Q 010976 275 VRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRL 354 (496)
Q Consensus 275 ~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al~~ 354 (496)
++|+..|+++++++|++..+++++|.++..+|+ |.+|..+|+++++++|++......+..
T Consensus 64 -~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~-------------------~~~A~~~~~~al~l~P~~~~a~~~l~~ 123 (126)
T 4gco_A 64 -QRALDDCDTCIRLDSKFIKGYIRKAACLVAMRE-------------------WSKAQRAYEDALQVDPSNEEAREGVRN 123 (126)
T ss_dssp -HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCC-------------------HHHHHHHHHHHHHHCcCCHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999999999999987776654
No 55
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.74 E-value=1.1e-16 Score=166.06 Aligned_cols=202 Identities=12% Similarity=-0.012 Sum_probs=168.2
Q ss_pred CChhhhhhcHHHHHHHHHHhhccc-------------------hhhhHhhccHHHHHHHHHHHHHhC--------CCCHH
Q 010976 105 NTPHQLAEQNNAAMELINSVTGVD-------------------EEGRSRQRILTFAAKRYANAIERN--------PEDYD 157 (496)
Q Consensus 105 ~~~~~~~~~~~~A~~~~~~~l~~~-------------------~~~~~~~g~~~~Ai~~~~~al~~~--------P~~~~ 157 (496)
+..+...|++++|+..+.+++.+. +..+..+|++++|+.+|++++++. +..+.
T Consensus 58 g~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~ 137 (472)
T 4g1t_A 58 AYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPE 137 (472)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHH
Confidence 334456799999999999987652 334667899999999999999873 46789
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 010976 158 ALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKN 237 (496)
Q Consensus 158 a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~ 237 (496)
++.++|.++...+. ++|++|+.+|+++++++|+++.+++++|.++.. ....++.++|+ ..
T Consensus 138 ~~~~~g~~~~~~~~------------~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~-l~~~~~~~~al-------~~ 197 (472)
T 4g1t_A 138 LDCEEGWTRLKCGG------------NQNERAKVCFEKALEKKPKNPEFTSGLAIASYR-LDNWPPSQNAI-------DP 197 (472)
T ss_dssp HHHHHHHHHHHHCT------------THHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-HHHSCCCCCTH-------HH
T ss_pred HHHHHHHHHHHHcc------------ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hcCchHHHHHH-------HH
Confidence 99999998888764 449999999999999999999999999998654 11256777777 89
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCC
Q 010976 238 YEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTV 317 (496)
Q Consensus 238 ~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~ 317 (496)
|+++++++|++..++.++|..+..+++. .+++++|+..|++++.++|++..++.++|.+|...|+
T Consensus 198 ~~~al~l~p~~~~~~~~l~~~~~~~~~~------~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~--------- 262 (472)
T 4g1t_A 198 LRQAIRLNPDNQYLKVLLALKLHKMREE------GEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDE--------- 262 (472)
T ss_dssp HHHHHHHCSSCHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC---------
T ss_pred HHHHhhcCCcchHHHHHHHHHHHHHHhh------hhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCc---------
Confidence 9999999999999999999988877654 4445899999999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHH
Q 010976 318 NPREVSPNELYSQSAIYIAAAHALKPSYSVYSSA 351 (496)
Q Consensus 318 ~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~a 351 (496)
+..|..+|.++++++|++......
T Consensus 263 ----------~~~A~~~~~~al~~~p~~~~~~~~ 286 (472)
T 4g1t_A 263 ----------PDKAIELLKKALEYIPNNAYLHCQ 286 (472)
T ss_dssp ----------HHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred ----------hHHHHHHHHHHHHhCCChHHHHHH
Confidence 899999999999999998744333
No 56
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.73 E-value=4.3e-17 Score=169.24 Aligned_cols=213 Identities=13% Similarity=0.021 Sum_probs=159.0
Q ss_pred ChhhhhhcHHHHHHHHHHhhccch------------------hhhH--hhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010976 106 TPHQLAEQNNAAMELINSVTGVDE------------------EGRS--RQRILTFAAKRYANAIERNPEDYDALYNWALV 165 (496)
Q Consensus 106 ~~~~~~~~~~~A~~~~~~~l~~~~------------------~~~~--~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~ 165 (496)
..+...|++++|+..+.+++.+.. .++. ..++|++|+.+|+++++++|++++++..+|.+
T Consensus 102 ~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~ 181 (472)
T 4g1t_A 102 WVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIA 181 (472)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 345578999999999998876531 1122 23689999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcC
Q 010976 166 LQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN 245 (496)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~ 245 (496)
+..+++. +.+++|++.|+++++++|++..++.++|..+...+...|++++|+ .+|++++.++
T Consensus 182 ~~~l~~~-----------~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~-------~~~~~al~~~ 243 (472)
T 4g1t_A 182 SYRLDNW-----------PPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGE-------KLVEEALEKA 243 (472)
T ss_dssp HHHHHHS-----------CCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHH-------HHHHHHHHHC
T ss_pred HHHhcCc-----------hHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHH-------HHHHHHHHhC
Confidence 7765430 117889999999999999999999999998887222244555666 8999999999
Q ss_pred CCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcH
Q 010976 246 WNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPN 325 (496)
Q Consensus 246 P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~ 325 (496)
|.+..+++++|.+|...|++ ++|+..|+++++++|++..+++++|.+|...+..................
T Consensus 244 ~~~~~~~~~lg~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~ 313 (472)
T 4g1t_A 244 PGVTDVLRSAAKFYRRKDEP----------DKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLL 313 (472)
T ss_dssp SSCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCch----------HHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 99999999999999999999 99999999999999999999999999998765433222211111111112
Q ss_pred HHHHHHHHHHHHHHhcCCcHH
Q 010976 326 ELYSQSAIYIAAAHALKPSYS 346 (496)
Q Consensus 326 ~~~~~A~~~~~~a~~l~p~~~ 346 (496)
..+..|..+|++++.++|.+.
T Consensus 314 ~~~~~A~~~~~~a~~~~~~~~ 334 (472)
T 4g1t_A 314 ELIGHAVAHLKKADEANDNLF 334 (472)
T ss_dssp HHHHHHHHHHHHHHHHCTTTC
T ss_pred hhHHHHHHHHHHHhhcCCchh
Confidence 234555666666666665543
No 57
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.73 E-value=2.5e-17 Score=172.03 Aligned_cols=167 Identities=16% Similarity=0.163 Sum_probs=130.2
Q ss_pred hhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010976 134 RQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIA 213 (496)
Q Consensus 134 ~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~ 213 (496)
..|++++|+..|+++++++|++..++..+|.++...|+ +++|+..|+++++.+|++..+++++|.+
T Consensus 316 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~la~~ 381 (514)
T 2gw1_A 316 ILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENK--------------FDDCETLFSEAKRKFPEAPEVPNFFAEI 381 (514)
T ss_dssp HTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTC--------------HHHHHHHHHHHHHHSTTCSHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHcccCHHHHHHHHHH
Confidence 34455555555555555555555555555555555555 7777777777777777777777777777
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHH---ccCcchHHHhhhhHHHHHHHHHH
Q 010976 214 ISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQ------ALNNWGLALQE---LSAIVPAREKQTIVRTAISKFRA 284 (496)
Q Consensus 214 ~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~------a~~~lg~~l~~---~g~~~~A~~~~~~~~~Ai~~~~~ 284 (496)
+.. .|++++|+ ..|++++.++|++.. +++++|.++.. .|++ ++|+..|++
T Consensus 382 ~~~----~~~~~~A~-------~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------~~A~~~~~~ 440 (514)
T 2gw1_A 382 LTD----KNDFDKAL-------KQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENF----------IEATNLLEK 440 (514)
T ss_dssp HHH----TTCHHHHH-------HHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHH----------HHHHHHHHH
T ss_pred HHH----CCCHHHHH-------HHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCH----------HHHHHHHHH
Confidence 777 77777777 788888888888755 99999999999 8998 999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHHHHh
Q 010976 285 AIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRL 354 (496)
Q Consensus 285 Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al~~ 354 (496)
+++++|++..+++++|.++...|+ +..|..+|+++++++|++......+..
T Consensus 441 a~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~a~~~~~~~~~~~~~~~~ 491 (514)
T 2gw1_A 441 ASKLDPRSEQAKIGLAQMKLQQED-------------------IDEAITLFEESADLARTMEEKLQAITF 491 (514)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHCSSHHHHHHHHHH
T ss_pred HHHhCcccHHHHHHHHHHHHHhcC-------------------HHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 999999999999999999999999 899999999999999999966555543
No 58
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.73 E-value=1.5e-17 Score=150.18 Aligned_cols=155 Identities=10% Similarity=-0.052 Sum_probs=134.7
Q ss_pred hHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010976 132 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 211 (496)
Q Consensus 132 ~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg 211 (496)
+...|++++|+..|+++++.+|+++.+++++|.++...|+ +++|+..|++++.++| ++..+..++
T Consensus 16 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~--------------~~~A~~~~~~a~~~~p-~~~~~~~~~ 80 (176)
T 2r5s_A 16 LLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQ--------------FELAQELLATIPLEYQ-DNSYKSLIA 80 (176)
T ss_dssp HHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTC--------------HHHHHHHHTTCCGGGC-CHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCC--------------HHHHHHHHHHhhhccC-ChHHHHHHH
Confidence 4567999999999999999999999999999999999999 9999999999999999 887776666
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCC
Q 010976 212 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFD 291 (496)
Q Consensus 212 ~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~ 291 (496)
.+.... .++..+|+ ..|+++++++|+++.+++++|.++...|++ ++|+..|+++++++|+
T Consensus 81 ~~~~~~---~~~~~~a~-------~~~~~al~~~P~~~~~~~~la~~~~~~g~~----------~~A~~~~~~~l~~~p~ 140 (176)
T 2r5s_A 81 KLELHQ---QAAESPEL-------KRLEQELAANPDNFELACELAVQYNQVGRD----------EEALELLWNILKVNLG 140 (176)
T ss_dssp HHHHHH---HHTSCHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHTTCTT
T ss_pred HHHHHh---hcccchHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHcccH----------HHHHHHHHHHHHhCcc
Confidence 553320 22333455 899999999999999999999999999999 9999999999999998
Q ss_pred C--HHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHh
Q 010976 292 F--HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHA 340 (496)
Q Consensus 292 ~--~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 340 (496)
+ ..++.++|.++..+|+ +..|..+|++++.
T Consensus 141 ~~~~~a~~~l~~~~~~~g~-------------------~~~A~~~y~~al~ 172 (176)
T 2r5s_A 141 AQDGEVKKTFMDILSALGQ-------------------GNAIASKYRRQLY 172 (176)
T ss_dssp TTTTHHHHHHHHHHHHHCS-------------------SCHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHhCC-------------------CCcHHHHHHHHHH
Confidence 6 6699999999999998 5567777776653
No 59
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.73 E-value=1.5e-16 Score=149.44 Aligned_cols=168 Identities=15% Similarity=0.069 Sum_probs=141.7
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHH--
Q 010976 131 GRSRQRILTFAAKRYANAIERNPED---YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHD-- 205 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~---~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~-- 205 (496)
.+...|++++|+..|+++++.+|++ ..+++.+|.+|..+|+ +++|+..|+++++++|++..
T Consensus 13 ~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~--------------~~~A~~~~~~~l~~~P~~~~~~ 78 (225)
T 2yhc_A 13 QKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNAD--------------LPLAQAAIDRFIRLNPTHPNID 78 (225)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCC--------------HHHHHHHHHHHHHHCcCCCcHH
Confidence 3556899999999999999999987 4799999999999999 99999999999999999864
Q ss_pred -HHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHHHHhcCCCCHHHH-----------------HHHH
Q 010976 206 -AFYNWAIAISDRAKMRG-----------RTKEAEELWKQATKNYEKAVQLNWNSPQAL-----------------NNWG 256 (496)
Q Consensus 206 -a~~~lg~~~~~~~~~~g-----------~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~-----------------~~lg 256 (496)
+++.+|.++.. +| ....-...+++|+..|+++++.+|++..++ ..+|
T Consensus 79 ~a~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a 154 (225)
T 2yhc_A 79 YVMYMRGLTNMA----LDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVA 154 (225)
T ss_dssp HHHHHHHHHHHH----HHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh----hhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999876 32 111112344555599999999999987654 5678
Q ss_pred HHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHH
Q 010976 257 LALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH---RAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAI 333 (496)
Q Consensus 257 ~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~---~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~ 333 (496)
.+|...|++ ++|+..|+++++..|+++ .+++.+|.++..+|+ +..|..
T Consensus 155 ~~~~~~~~~----------~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~-------------------~~~A~~ 205 (225)
T 2yhc_A 155 EYYTERGAW----------VAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQM-------------------NAQAEK 205 (225)
T ss_dssp HHHHHHTCH----------HHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTC-------------------HHHHHH
T ss_pred HHHHHcCcH----------HHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCC-------------------cHHHHH
Confidence 888888888 999999999999999986 789999999999999 889999
Q ss_pred HHHHHHhcCCcH
Q 010976 334 YIAAAHALKPSY 345 (496)
Q Consensus 334 ~~~~a~~l~p~~ 345 (496)
+++++....|+.
T Consensus 206 ~~~~l~~~~~~~ 217 (225)
T 2yhc_A 206 VAKIIAANSSNT 217 (225)
T ss_dssp HHHHHHHCCSCC
T ss_pred HHHHHHhhCCCc
Confidence 998888877754
No 60
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.73 E-value=1.4e-17 Score=146.43 Aligned_cols=128 Identities=16% Similarity=0.073 Sum_probs=118.2
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Q 010976 141 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKM 220 (496)
Q Consensus 141 Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~ 220 (496)
+-..|++++.++|++..+++++|.++...|+ +++|+..|++++.++|+++.+|+++|.++..
T Consensus 6 ~~~~~~~al~~~p~~~~~~~~~g~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~---- 67 (148)
T 2vgx_A 6 GGGTIAMLNEISSDTLEQLYSLAFNQYQSGX--------------YEDAHXVFQALCVLDHYDSRFFLGLGACRQA---- 67 (148)
T ss_dssp CCCSHHHHTTCCHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----
T ss_pred hhhhHHHHHcCCHhhHHHHHHHHHHHHHcCC--------------hHHHHHHHHHHHHcCcccHHHHHHHHHHHHH----
Confidence 3456889999999999999999999999999 9999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 010976 221 RGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLG 300 (496)
Q Consensus 221 ~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg 300 (496)
+|++++|+ .+|++++.++|+++.+++++|.+|..+|++ ++|+..|+++++++|+++.....+.
T Consensus 68 ~g~~~~A~-------~~~~~al~l~p~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~al~~~p~~~~~~~~~~ 130 (148)
T 2vgx_A 68 MGQYDLAI-------HSYSYGAVMDIXEPRFPFHAAECLLQXGEL----------AEAESGLFLAQELIANXPEFXELST 130 (148)
T ss_dssp TTCHHHHH-------HHHHHHHHHSTTCTHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred HhhHHHHH-------HHHHHHHhcCCCCchHHHHHHHHHHHcCCH----------HHHHHHHHHHHHHCcCCCcchHHHH
Confidence 99999999 899999999999999999999999999999 9999999999999998876544444
Q ss_pred HHH
Q 010976 301 TVL 303 (496)
Q Consensus 301 ~~~ 303 (496)
.+.
T Consensus 131 ~~~ 133 (148)
T 2vgx_A 131 RVS 133 (148)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 61
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.73 E-value=9.2e-17 Score=169.10 Aligned_cols=180 Identities=14% Similarity=0.099 Sum_probs=164.8
Q ss_pred hhcHHHHHHHHHHhhccc-----------------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCC
Q 010976 111 AEQNNAAMELINSVTGVD-----------------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNV 173 (496)
Q Consensus 111 ~~~~~~A~~~~~~~l~~~-----------------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~ 173 (496)
.++++.|+..+.+++... +..+...|++++|+..|+++++.+|+ ..++..+|.++...|+
T Consensus 215 ~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~-- 291 (537)
T 3fp2_A 215 NDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKEN-- 291 (537)
T ss_dssp HHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSSC--
T ss_pred HHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhcC--
Confidence 357888888888877654 23455679999999999999999999 9999999999999999
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHH
Q 010976 174 SLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALN 253 (496)
Q Consensus 174 ~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~ 253 (496)
+++|+..|+++++++|++..+++.+|.++.. .|++++|+ ..|+++++++|++..+++
T Consensus 292 ------------~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~-------~~~~~a~~~~~~~~~~~~ 348 (537)
T 3fp2_A 292 ------------SQEFFKFFQKAVDLNPEYPPTYYHRGQMYFI----LQDYKNAK-------EDFQKAQSLNPENVYPYI 348 (537)
T ss_dssp ------------CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCSHHHH
T ss_pred ------------HHHHHHHHHHHhccCCCCHHHHHHHHHHHHh----cCCHHHHH-------HHHHHHHHhCCCCHHHHH
Confidence 9999999999999999999999999999999 99999999 899999999999999999
Q ss_pred HHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHH
Q 010976 254 NWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAI 333 (496)
Q Consensus 254 ~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~ 333 (496)
++|.++...|++ ++|+..|+++++++|+++.+++++|.++...|+ +..|..
T Consensus 349 ~la~~~~~~g~~----------~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-------------------~~~A~~ 399 (537)
T 3fp2_A 349 QLACLLYKQGKF----------TESEAFFNETKLKFPTLPEVPTFFAEILTDRGD-------------------FDTAIK 399 (537)
T ss_dssp HHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTC-------------------HHHHHH
T ss_pred HHHHHHHHcCCH----------HHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC-------------------HHHHHH
Confidence 999999999999 999999999999999999999999999999999 888888
Q ss_pred HHHHHHhcCCcH
Q 010976 334 YIAAAHALKPSY 345 (496)
Q Consensus 334 ~~~~a~~l~p~~ 345 (496)
+|+++++++|..
T Consensus 400 ~~~~a~~~~~~~ 411 (537)
T 3fp2_A 400 QYDIAKRLEEVQ 411 (537)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHcCCcc
Confidence 888888877654
No 62
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.72 E-value=1.8e-17 Score=166.12 Aligned_cols=140 Identities=16% Similarity=0.128 Sum_probs=135.1
Q ss_pred hhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC----------
Q 010976 134 RQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL---------- 203 (496)
Q Consensus 134 ~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~---------- 203 (496)
.++++++|+..|++++..+|+++.+++++|.+|+..|+ +++|+..|++++.++|++
T Consensus 125 ~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~--------------~~~A~~~y~~Al~~~p~~~~~~~~~~~~ 190 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGK--------------YKQALLQYKKIVSWLEYESSFSNEEAQK 190 (336)
T ss_dssp EEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHTTTCCCCCSHHHHH
T ss_pred EEeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHHHhhccccCChHHHHH
Confidence 35778889999999999999999999999999999999 999999999999999999
Q ss_pred -----HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHH
Q 010976 204 -----HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTA 278 (496)
Q Consensus 204 -----~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~A 278 (496)
..+|+++|.+|.. +|++++|+ .+|+++++++|+++.+++++|.+|..+|++ ++|
T Consensus 191 ~~~~~~~~~~nla~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~a~~~lg~~~~~~g~~----------~~A 249 (336)
T 1p5q_A 191 AQALRLASHLNLAMCHLK----LQAFSAAI-------ESCNKALELDSNNEKGLSRRGEAHLAVNDF----------ELA 249 (336)
T ss_dssp HHHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHH
T ss_pred HHHHHHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCcHHHHHHHHHHHHHCCCH----------HHH
Confidence 6999999999999 99999999 899999999999999999999999999999 999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010976 279 ISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 279 i~~~~~Al~l~P~~~~a~~~lg~~~~~~g~ 308 (496)
+..|+++++++|++..++.++|.++..+|+
T Consensus 250 ~~~~~~al~l~P~~~~a~~~l~~~~~~~~~ 279 (336)
T 1p5q_A 250 RADFQKVLQLYPNNKAAKTQLAVCQQRIRR 279 (336)
T ss_dssp HHHHHHHHHHCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998
No 63
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.71 E-value=7.4e-17 Score=157.83 Aligned_cols=143 Identities=10% Similarity=0.001 Sum_probs=135.4
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 210 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~l 210 (496)
.+...|++++|+..|+++++.+|+++.+++++|.++..+|+ +++|+..|++++..+|+....+.+.
T Consensus 126 ~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~--------------~~~A~~~l~~~~~~~p~~~~~~~~~ 191 (287)
T 3qou_A 126 QLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNR--------------SEDAEAVLXTIPLQDQDTRYQGLVA 191 (287)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTC--------------HHHHHHHHTTSCGGGCSHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCC--------------HHHHHHHHHhCchhhcchHHHHHHH
Confidence 35567999999999999999999999999999999999999 9999999999999999888888888
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcC
Q 010976 211 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQF 290 (496)
Q Consensus 211 g~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P 290 (496)
+..+.. .++.++|+ ..|+++++.+|+++.+++++|.+|...|++ ++|+..|+++++.+|
T Consensus 192 ~~~l~~----~~~~~~a~-------~~l~~al~~~P~~~~~~~~la~~l~~~g~~----------~~A~~~l~~~l~~~p 250 (287)
T 3qou_A 192 QIELLX----QAADTPEI-------QQLQQQVAENPEDAALATQLALQLHQVGRN----------EEALELLFGHLRXDL 250 (287)
T ss_dssp HHHHHH----HHTSCHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCT
T ss_pred HHHHHh----hcccCccH-------HHHHHHHhcCCccHHHHHHHHHHHHHcccH----------HHHHHHHHHHHhccc
Confidence 888888 88888888 899999999999999999999999999999 999999999999999
Q ss_pred CC--HHHHHHHHHHHHHcch
Q 010976 291 DF--HRAIYNLGTVLYGLAE 308 (496)
Q Consensus 291 ~~--~~a~~~lg~~~~~~g~ 308 (496)
++ ..++.++|.++..+|+
T Consensus 251 ~~~~~~a~~~l~~~~~~~g~ 270 (287)
T 3qou_A 251 TAADGQTRXTFQEILAALGT 270 (287)
T ss_dssp TGGGGHHHHHHHHHHHHHCT
T ss_pred ccccchHHHHHHHHHHHcCC
Confidence 99 8999999999999997
No 64
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.71 E-value=8.7e-17 Score=157.53 Aligned_cols=186 Identities=14% Similarity=0.056 Sum_probs=150.6
Q ss_pred hhhhhhcHHHHHHHHHHhhccc----------------hhhhHhhccHHHHHHHHHHHHHhCCCC------HHHHHHHHH
Q 010976 107 PHQLAEQNNAAMELINSVTGVD----------------EEGRSRQRILTFAAKRYANAIERNPED------YDALYNWAL 164 (496)
Q Consensus 107 ~~~~~~~~~~A~~~~~~~l~~~----------------~~~~~~~g~~~~Ai~~~~~al~~~P~~------~~a~~~lg~ 164 (496)
.+...|++++|+..+.+++... +..+..+|++++|+.+|++++++.|.. ..++.++|.
T Consensus 46 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~ 125 (292)
T 1qqe_A 46 IYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGE 125 (292)
T ss_dssp HHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3556788999999988887763 334566799999999999999998754 568999999
Q ss_pred HHHHh-cCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 010976 165 VLQES-ADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL------HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKN 237 (496)
Q Consensus 165 ~~~~~-~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~------~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~ 237 (496)
+|... |+ +++|+.+|++|+++.|.+ ..++.++|.++.. +|++++|+ ..
T Consensus 126 ~~~~~lg~--------------~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~-------~~ 180 (292)
T 1qqe_A 126 ILENDLHD--------------YAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKAL----DGQYIEAS-------DI 180 (292)
T ss_dssp HHHHTTCC--------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHH-------HH
T ss_pred HHHHhhcC--------------HHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH----hCCHHHHH-------HH
Confidence 99996 99 999999999999998864 5789999999999 99999999 89
Q ss_pred HHHHHhcCCCCHH-------HHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHH
Q 010976 238 YEKAVQLNWNSPQ-------ALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRA-----IYNLGTVLYG 305 (496)
Q Consensus 238 ~~~Al~l~P~~~~-------a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a-----~~~lg~~~~~ 305 (496)
|+++++++|++.. +++++|.++..+|++ ++|+.+|+++++++|++... +.+++.++..
T Consensus 181 ~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~al~l~p~~~~~~~~~~l~~l~~~~~~ 250 (292)
T 1qqe_A 181 YSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDA----------VAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNE 250 (292)
T ss_dssp HHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCH----------HHHHHHHHGGGCC---------HHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHc
Confidence 9999999887643 689999999999999 99999999999999987764 3445554431
Q ss_pred --cchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHH
Q 010976 306 --LAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 346 (496)
Q Consensus 306 --~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~ 346 (496)
.++ +..|...|.++..++|...
T Consensus 251 ~~~~~-------------------~~~A~~~~~~~~~l~~~~~ 274 (292)
T 1qqe_A 251 GDSEQ-------------------LSEHCKEFDNFMRLDKWKI 274 (292)
T ss_dssp TCTTT-------------------HHHHHHHHTTSSCCCHHHH
T ss_pred CCHHH-------------------HHHHHHHhccCCccHHHHH
Confidence 222 7889999999999998775
No 65
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.71 E-value=3.8e-16 Score=149.65 Aligned_cols=178 Identities=17% Similarity=0.082 Sum_probs=153.7
Q ss_pred hhhhhcHHHHHHHHHHhhccc-------------hhhhHhhccHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH---
Q 010976 108 HQLAEQNNAAMELINSVTGVD-------------EEGRSRQRILTFAAKRYANAIERNPED---YDALYNWALVLQE--- 168 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~-------------~~~~~~~g~~~~Ai~~~~~al~~~P~~---~~a~~~lg~~~~~--- 168 (496)
+...|+++.|+..+.+++... +.++..+|++++|+..|+++++++|++ +.+++.+|.++..
T Consensus 25 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~ 104 (261)
T 3qky_A 25 FYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSP 104 (261)
T ss_dssp HHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCC
T ss_pred HHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcc
Confidence 456789999999999998764 345677899999999999999998854 6899999999999
Q ss_pred -----hcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHHHHHcCCHHH
Q 010976 169 -----SADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAF-----------------YNWAIAISDRAKMRGRTKE 226 (496)
Q Consensus 169 -----~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~-----------------~~lg~~~~~~~~~~g~~~e 226 (496)
+|+ +++|+..|++++..+|++..+. +++|.+|.. +|++++
T Consensus 105 ~~~~~~~~--------------~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~ 166 (261)
T 3qky_A 105 PYELDQTD--------------TRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYER----RELYEA 166 (261)
T ss_dssp CTTSCCHH--------------HHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCHHH
T ss_pred cccccchh--------------HHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----ccCHHH
Confidence 666 9999999999999999987665 889999999 999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCC---CHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCH---HHHHHHH
Q 010976 227 AEELWKQATKNYEKAVQLNWN---SPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH---RAIYNLG 300 (496)
Q Consensus 227 A~~~~~~A~~~~~~Al~l~P~---~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~---~a~~~lg 300 (496)
|+ ..|+++++.+|+ .+.+++++|.+|..+|+...+....|++++|+..|+++++..|+++ .+...++
T Consensus 167 A~-------~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~ 239 (261)
T 3qky_A 167 AA-------VTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRTAEELYT 239 (261)
T ss_dssp HH-------HHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred HH-------HHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHHHHHHHHH
Confidence 99 899999999998 5779999999999997665555566777999999999999999994 6777788
Q ss_pred HHHHHcchhH
Q 010976 301 TVLYGLAEDT 310 (496)
Q Consensus 301 ~~~~~~g~~~ 310 (496)
.++..+++..
T Consensus 240 ~~~~~~~~~~ 249 (261)
T 3qky_A 240 RARQRLTELE 249 (261)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 8888888743
No 66
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.70 E-value=3.3e-16 Score=145.47 Aligned_cols=119 Identities=18% Similarity=0.146 Sum_probs=114.9
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHH----------------HHHHHHHHH
Q 010976 155 DYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYN----------------WAIAISDRA 218 (496)
Q Consensus 155 ~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~----------------lg~~~~~~~ 218 (496)
.++.+...|..+...|+ +++|+..|+++++++|+++.+++. +|.+|..
T Consensus 3 ~~~~~~~~g~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~-- 66 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQ--------------NGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKK-- 66 (208)
T ss_dssp CHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHH--
T ss_pred CHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHH--
Confidence 56788999999999999 999999999999999999999999 9999999
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHH
Q 010976 219 KMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYN 298 (496)
Q Consensus 219 ~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~ 298 (496)
+|++++|+ ..|+++++++|+++.+++++|.++..+|++ ++|+..|+++++++|+++.++++
T Consensus 67 --~g~~~~A~-------~~~~~al~~~p~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~al~~~P~~~~a~~~ 127 (208)
T 3urz_A 67 --NRNYDKAY-------LFYKELLQKAPNNVDCLEACAEMQVCRGQE----------KDALRMYEKILQLEADNLAANIF 127 (208)
T ss_dssp --TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHTCH----------HHHHHHHHHHHHHCTTCHHHHHH
T ss_pred --CCCHHHHH-------HHHHHHHHHCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHcCCCCHHHHHH
Confidence 99999999 899999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHcch
Q 010976 299 LGTVLYGLAE 308 (496)
Q Consensus 299 lg~~~~~~g~ 308 (496)
+|.+|+..|+
T Consensus 128 lg~~~~~~~~ 137 (208)
T 3urz_A 128 LGNYYYLTAE 137 (208)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhH
Confidence 9999988875
No 67
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.70 E-value=1.3e-16 Score=166.59 Aligned_cols=190 Identities=15% Similarity=0.143 Sum_probs=168.1
Q ss_pred hhhhhhcHHHHHHHHHHhhccc---------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 010976 107 PHQLAEQNNAAMELINSVTGVD---------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDS 177 (496)
Q Consensus 107 ~~~~~~~~~~A~~~~~~~l~~~---------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~ 177 (496)
.+...|+++.|+..+.+++... +..+...|++++|+..|++++..+|++..++..+|.++...|+
T Consensus 246 ~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------ 319 (514)
T 2gw1_A 246 FKFLKNDPLGAHEDIKKAIELFPRVNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQN------ 319 (514)
T ss_dssp HHHHSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTC------
T ss_pred HHHHCCCHHHHHHHHHHHHhhCccHHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCC------
Confidence 3456788888888888877654 3345567889999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 010976 178 TSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGL 257 (496)
Q Consensus 178 ~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 257 (496)
+++|+..|+++++++|++..+++++|.++.. .|++++|+ ..|+++++.+|+++.+++++|.
T Consensus 320 --------~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~la~ 380 (514)
T 2gw1_A 320 --------YDQAGKDFDKAKELDPENIFPYIQLACLAYR----ENKFDDCE-------TLFSEAKRKFPEAPEVPNFFAE 380 (514)
T ss_dssp --------TTHHHHHHHHHHHTCSSCSHHHHHHHHHTTT----TTCHHHHH-------HHHHHHHHHSTTCSHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHhChhhHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHHcccCHHHHHHHHH
Confidence 9999999999999999999999999999999 99999998 7888888999999999999999
Q ss_pred HHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHH---cchhHHhccCCCCCCCCCcHHHH
Q 010976 258 ALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHR------AIYNLGTVLYG---LAEDTLRTGGTVNPREVSPNELY 328 (496)
Q Consensus 258 ~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~------a~~~lg~~~~~---~g~~~~a~~~~~~~~~~~~~~~~ 328 (496)
++...|++ ++|+..|+++++++|++.. +++++|.++.. .|+ +
T Consensus 381 ~~~~~~~~----------~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------------------~ 431 (514)
T 2gw1_A 381 ILTDKNDF----------DKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVEN-------------------F 431 (514)
T ss_dssp HHHHTTCH----------HHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTH-------------------H
T ss_pred HHHHCCCH----------HHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCC-------------------H
Confidence 99999999 9999999999999998865 99999999999 998 8
Q ss_pred HHHHHHHHHHHhcCCcHHHHHH
Q 010976 329 SQSAIYIAAAHALKPSYSVYSS 350 (496)
Q Consensus 329 ~~A~~~~~~a~~l~p~~~~y~~ 350 (496)
..|..+|++++.++|++.....
T Consensus 432 ~~A~~~~~~a~~~~~~~~~~~~ 453 (514)
T 2gw1_A 432 IEATNLLEKASKLDPRSEQAKI 453 (514)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHhCcccHHHHH
Confidence 9999999999999998874433
No 68
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.69 E-value=2.4e-15 Score=147.48 Aligned_cols=165 Identities=8% Similarity=-0.059 Sum_probs=144.3
Q ss_pred hhhHhhccHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHH
Q 010976 130 EGRSRQRILTFAAKRYANAIER--NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAF 207 (496)
Q Consensus 130 ~~~~~~g~~~~Ai~~~~~al~~--~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~ 207 (496)
..+...+++++|+..+++++.. +|+++.+++.+|.++...|+ +++|++.|++ |++..++
T Consensus 73 ~~~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~--------------~~~Al~~l~~-----~~~~~~~ 133 (291)
T 3mkr_A 73 EYLASHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQN--------------PDAALRTLHQ-----GDSLECM 133 (291)
T ss_dssp HHHHCSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTC--------------HHHHHHHHTT-----CCSHHHH
T ss_pred HHHcCCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCC--------------HHHHHHHHhC-----CCCHHHH
Confidence 3355568999999999999986 69999999999999999999 9999999998 8999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH--HHHHHccCcchHHHhhhhHHHHHHHHHHH
Q 010976 208 YNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWG--LALQELSAIVPAREKQTIVRTAISKFRAA 285 (496)
Q Consensus 208 ~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg--~~l~~~g~~~~A~~~~~~~~~Ai~~~~~A 285 (496)
..+|.+|.. +|++++|+ ..|+++++.+|++.......+ .++...|++ ++|+..|+++
T Consensus 134 ~~l~~~~~~----~g~~~~A~-------~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~----------~eA~~~~~~~ 192 (291)
T 3mkr_A 134 AMTVQILLK----LDRLDLAR-------KELKKMQDQDEDATLTQLATAWVSLAAGGEKL----------QDAYYIFQEM 192 (291)
T ss_dssp HHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHH----------HHHHHHHHHH
T ss_pred HHHHHHHHH----CCCHHHHH-------HHHHHHHhhCcCcHHHHHHHHHHHHHhCchHH----------HHHHHHHHHH
Confidence 999999999 99999999 888999999999865443333 223333666 9999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Q 010976 286 IQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALR 353 (496)
Q Consensus 286 l~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al~ 353 (496)
++.+|+++.+++++|.++..+|+ +.+|..+|+++++++|+++.....+.
T Consensus 193 l~~~p~~~~~~~~la~~~~~~g~-------------------~~eA~~~l~~al~~~p~~~~~l~~l~ 241 (291)
T 3mkr_A 193 ADKCSPTLLLLNGQAACHMAQGR-------------------WEAAEGVLQEALDKDSGHPETLINLV 241 (291)
T ss_dssp HHHSCCCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHhCCCcHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 99999999999999999999999 99999999999999999996544443
No 69
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.69 E-value=8e-17 Score=140.08 Aligned_cols=130 Identities=15% Similarity=0.054 Sum_probs=117.4
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcC
Q 010976 143 KRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRG 222 (496)
Q Consensus 143 ~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g 222 (496)
..|++++.++|++..+++.+|.++...|+ +++|+..|++++.++|+++.+|+++|.++.. +|
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~g 66 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGK--------------WDDAQKIFQALCMLDHYDARYFLGLGACRQS----LG 66 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHcc--------------HHHHHHHHHHHHHhCCccHHHHHHHHHHHHH----Hh
Confidence 56788899999999999999999999999 9999999999999999999999999999999 99
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 010976 223 RTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTV 302 (496)
Q Consensus 223 ~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~ 302 (496)
++++|+ .+|++++.++|+++.+++++|.+|..+|++ ++|+..|+++++++|+++........+
T Consensus 67 ~~~~A~-------~~~~~al~~~p~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~al~~~p~~~~~~~~~~~~ 129 (142)
T 2xcb_A 67 LYEQAL-------QSYSYGALMDINEPRFPFHAAECHLQLGDL----------DGAESGFYSARALAAAQPAHEALAARA 129 (142)
T ss_dssp CHHHHH-------HHHHHHHHHCTTCTHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHTCGGGHHHHHHH
T ss_pred hHHHHH-------HHHHHHHhcCCCCcHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCcchHHHHHHH
Confidence 999999 899999999999999999999999999999 999999999999999988766655555
Q ss_pred HHHcc
Q 010976 303 LYGLA 307 (496)
Q Consensus 303 ~~~~g 307 (496)
...++
T Consensus 130 ~~~l~ 134 (142)
T 2xcb_A 130 GAMLE 134 (142)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 70
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.69 E-value=4.9e-16 Score=148.55 Aligned_cols=159 Identities=14% Similarity=0.059 Sum_probs=141.6
Q ss_pred HhhccHHHHHHHHHHHHHhC----CCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHH
Q 010976 133 SRQRILTFAAKRYANAIERN----PEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFY 208 (496)
Q Consensus 133 ~~~g~~~~Ai~~~~~al~~~----P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~ 208 (496)
...|++++|+..|+++++.. |.++.+++.+|.++...|+ +++|+..|+++++++|++..+++
T Consensus 16 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~A~~~~~~al~~~~~~~~~~~ 81 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGL--------------RALARNDFSQALAIRPDMPEVFN 81 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCCCCHHHHH
T ss_pred CccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHccc--------------HHHHHHHHHHHHHcCCCcHHHHH
Confidence 34689999999999999983 5678999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHh
Q 010976 209 NWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 288 (496)
Q Consensus 209 ~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l 288 (496)
++|.++.. .|++++|+ .+|+++++++|.+..+++++|.++..+|++ ++|+..|++++++
T Consensus 82 ~la~~~~~----~~~~~~A~-------~~~~~al~~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~a~~~ 140 (275)
T 1xnf_A 82 YLGIYLTQ----AGNFDAAY-------EAFDSVLELDPTYNYAHLNRGIALYYGGRD----------KLAQDDLLAFYQD 140 (275)
T ss_dssp HHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCTHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHH
T ss_pred HHHHHHHH----ccCHHHHH-------HHHHHHHhcCccccHHHHHHHHHHHHhccH----------HHHHHHHHHHHHh
Confidence 99999999 99999999 899999999999999999999999999999 9999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHH
Q 010976 289 QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 346 (496)
Q Consensus 289 ~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~ 346 (496)
+|++......++.+ ...|+ +..|..++.+++...|...
T Consensus 141 ~~~~~~~~~~~~~~-~~~~~-------------------~~~A~~~~~~~~~~~~~~~ 178 (275)
T 1xnf_A 141 DPNDPFRSLWLYLA-EQKLD-------------------EKQAKEVLKQHFEKSDKEQ 178 (275)
T ss_dssp CTTCHHHHHHHHHH-HHHHC-------------------HHHHHHHHHHHHHHSCCCS
T ss_pred CCCChHHHHHHHHH-HHhcC-------------------HHHHHHHHHHHHhcCCcch
Confidence 99999777766655 44466 6777777777777666554
No 71
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.69 E-value=2.2e-15 Score=148.56 Aligned_cols=150 Identities=12% Similarity=0.037 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHH
Q 010976 138 LTFAAKRYANAIE-RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHD-AFYNWAIAIS 215 (496)
Q Consensus 138 ~~~Ai~~~~~al~-~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~-a~~~lg~~~~ 215 (496)
+++|+..|++|++ ++|++..+|..+|.++...|+ +++|++.|+++++++|+++. +|.++|.++.
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 145 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNMLLYFAYADYEESRMK--------------YEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR 145 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHTSSSSCTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCC--------------HHHHHHHHHHHHhccccCccHHHHHHHHHHH
Confidence 3999999999999 799999999999999999999 99999999999999999987 9999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-ccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHH
Q 010976 216 DRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE-LSAIVPAREKQTIVRTAISKFRAAIQLQFDFHR 294 (496)
Q Consensus 216 ~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~-~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~ 294 (496)
. .|++++|+ ..|+++++.+|.+..++...+.+... .|++ ++|+..|+++++++|+++.
T Consensus 146 ~----~~~~~~A~-------~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~----------~~A~~~~~~al~~~p~~~~ 204 (308)
T 2ond_A 146 R----AEGIKSGR-------MIFKKAREDARTRHHVYVTAALMEYYCSKDK----------SVAFKIFELGLKKYGDIPE 204 (308)
T ss_dssp H----HHCHHHHH-------HHHHHHHTSTTCCTHHHHHHHHHHHHTSCCH----------HHHHHHHHHHHHHHTTCHH
T ss_pred H----hcCHHHHH-------HHHHHHHhcCCCCHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCcHH
Confidence 9 99999998 89999999999998888877766543 6888 9999999999999999999
Q ss_pred HHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhc
Q 010976 295 AIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHAL 341 (496)
Q Consensus 295 a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l 341 (496)
+|.++|.++..+|+ +..|..+|++++..
T Consensus 205 ~~~~~~~~~~~~g~-------------------~~~A~~~~~~al~~ 232 (308)
T 2ond_A 205 YVLAYIDYLSHLNE-------------------DNNTRVLFERVLTS 232 (308)
T ss_dssp HHHHHHHHHHTTCC-------------------HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCC-------------------HHHHHHHHHHHHhc
Confidence 99999999999998 78888999999885
No 72
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.68 E-value=1.2e-16 Score=140.91 Aligned_cols=124 Identities=15% Similarity=0.081 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHHHHHcCC
Q 010976 156 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT-------LHD-----AFYNWAIAISDRAKMRGR 223 (496)
Q Consensus 156 ~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~-------~~~-----a~~~lg~~~~~~~~~~g~ 223 (496)
+..+.++|..++..|+ |++|+..|++||+++|+ +.. +|+|+|.++.. +|+
T Consensus 11 a~~~~~~G~~l~~~g~--------------~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~----Lgr 72 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGE--------------YDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAG----LRS 72 (159)
T ss_dssp HHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHH----TTC
T ss_pred HHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHH----CCC
Confidence 4678899999999999 99999999999999999 555 99999999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHH----HHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHH
Q 010976 224 TKEAEELWKQATKNYEKAVQLNWNSPQAL----NNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNL 299 (496)
Q Consensus 224 ~~eA~~~~~~A~~~~~~Al~l~P~~~~a~----~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~l 299 (496)
+++|+.+|++|++.|.++++++|++..+| +++|.+|..+|++ ++|+.+|++|++++|++..+...+
T Consensus 73 ~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~----------eEAl~~y~kAlel~p~d~~~~~~~ 142 (159)
T 2hr2_A 73 FDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRG----------AEAMPEFKKVVEMIEERKGETPGK 142 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHCCSCCTTH
T ss_pred HHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCH----------HHHHHHHHHHHhcCCCcHHHHHHH
Confidence 99999999999999999999999999999 9999999999999 999999999999999987766666
Q ss_pred HHHHHHcc
Q 010976 300 GTVLYGLA 307 (496)
Q Consensus 300 g~~~~~~g 307 (496)
..+.....
T Consensus 143 ~~~~~~~~ 150 (159)
T 2hr2_A 143 ERMMEVAI 150 (159)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 65544433
No 73
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.68 E-value=2.5e-15 Score=134.08 Aligned_cols=152 Identities=14% Similarity=0.187 Sum_probs=139.6
Q ss_pred hhhhhcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 010976 108 HQLAEQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDS 177 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~ 177 (496)
+...++++.|+..+.+++... +..+...|++++|+..|+++++.+|++..++..+|.++...|+
T Consensus 18 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~------ 91 (186)
T 3as5_A 18 HAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQK------ 91 (186)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC------
T ss_pred HHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcC------
Confidence 345688888888888877654 3446678999999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 010976 178 TSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGL 257 (496)
Q Consensus 178 ~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 257 (496)
+++|++.|++++.++|++..+++.+|.++.. .|++++|+ ..|+++++.+|.++.++.++|.
T Consensus 92 --------~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~la~ 152 (186)
T 3as5_A 92 --------YDLAVPLLIKVAEANPINFNVRFRLGVALDN----LGRFDEAI-------DSFKIALGLRPNEGKVHRAIAF 152 (186)
T ss_dssp --------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHhcCcHhHHHHHHHHHHHHH----cCcHHHHH-------HHHHHHHhcCccchHHHHHHHH
Confidence 9999999999999999999999999999999 99999999 8889999999999999999999
Q ss_pred HHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHH
Q 010976 258 ALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHR 294 (496)
Q Consensus 258 ~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~ 294 (496)
++...|++ ++|+..|+++++++|++..
T Consensus 153 ~~~~~~~~----------~~A~~~~~~~~~~~~~~~~ 179 (186)
T 3as5_A 153 SYEQMGRH----------EEALPHFKKANELDEGASV 179 (186)
T ss_dssp HHHHTTCH----------HHHHHHHHHHHHHHHCCCG
T ss_pred HHHHcCCH----------HHHHHHHHHHHHcCCCchh
Confidence 99999999 9999999999999988653
No 74
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.68 E-value=9.4e-16 Score=129.84 Aligned_cols=119 Identities=16% Similarity=0.019 Sum_probs=112.6
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 010976 153 PEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWK 232 (496)
Q Consensus 153 P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~ 232 (496)
|..+..++.+|..++..|+ +++|+..|+++++++|+++.+|+++|.++.. +|++++|+
T Consensus 1 p~~a~~~~~~g~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~----~~~~~~A~---- 58 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSD--------------WPNAVKAYTEMIKRAPEDARGYSNRAAALAK----LMSFPEAI---- 58 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH----
T ss_pred CchHHHHHHHHHHHHHhcC--------------HHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----hcCHHHHH----
Confidence 4467889999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhc------CCCHHHHHHHHHHHHHc
Q 010976 233 QATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ------FDFHRAIYNLGTVLYGL 306 (496)
Q Consensus 233 ~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~------P~~~~a~~~lg~~~~~~ 306 (496)
..|+++++++|+++.+++++|.++..+|++ ++|+..|+++++++ |++..++..++.+...+
T Consensus 59 ---~~~~~al~~~p~~~~~~~~lg~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 59 ---ADCNKAIEKDPNFVRAYIRKATAQIAVKEY----------ASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp ---HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHhCCCcHHHHHHHHHHHHHHhCH----------HHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 899999999999999999999999999999 99999999999999 99999999998887543
No 75
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.68 E-value=3.2e-16 Score=152.30 Aligned_cols=190 Identities=16% Similarity=0.167 Sum_probs=158.4
Q ss_pred hhhhhcHHHHHHHHHHhhcc--------c----------hhhhHhhccHHHHHHHHHHHHHh--------CCCCHHHHHH
Q 010976 108 HQLAEQNNAAMELINSVTGV--------D----------EEGRSRQRILTFAAKRYANAIER--------NPEDYDALYN 161 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~--------~----------~~~~~~~g~~~~Ai~~~~~al~~--------~P~~~~a~~~ 161 (496)
+...|+++.|+..+.+++.. . +..+...|++++|+.+|++++.+ .|....++.+
T Consensus 37 ~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 116 (311)
T 3nf1_A 37 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNN 116 (311)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 34567888888888887763 1 34456789999999999999988 4667889999
Q ss_pred HHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 010976 162 WALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC--------PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQ 233 (496)
Q Consensus 162 lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~--------P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~ 233 (496)
+|.+|...|+ +++|+.+|++++++. |....+++++|.++.. .|++++|++.|++
T Consensus 117 l~~~~~~~g~--------------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~ 178 (311)
T 3nf1_A 117 LAVLYGKRGK--------------YKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQN----QGKYEEVEYYYQR 178 (311)
T ss_dssp HHHHHHTTTC--------------HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHH
T ss_pred HHHHHHHcCc--------------HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH----cCCHHHHHHHHHH
Confidence 9999999999 999999999999984 6677889999999999 9999999966666
Q ss_pred HHHHHHHHHhc-CCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHh------------------------
Q 010976 234 ATKNYEKAVQL-NWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL------------------------ 288 (496)
Q Consensus 234 A~~~~~~Al~l-~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l------------------------ 288 (496)
++..+++...- +|....+++++|.+|..+|++ ++|+..|++++++
T Consensus 179 a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (311)
T 3nf1_A 179 ALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKF----------KQAETLYKEILTRAHEREFGSVDDENKPIWMHAEERE 248 (311)
T ss_dssp HHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCH----------HHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHH
Confidence 66655443211 566788999999999999999 9999999999974
Q ss_pred -------------------------cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCC
Q 010976 289 -------------------------QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKP 343 (496)
Q Consensus 289 -------------------------~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p 343 (496)
+|....+++++|.+|..+|+ +.+|..+|++++++.|
T Consensus 249 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~al~l~~ 309 (311)
T 3nf1_A 249 ECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGK-------------------FEAAETLEEAAMRSRK 309 (311)
T ss_dssp HC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHHC
T ss_pred HhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCC-------------------HHHHHHHHHHHHHHhh
Confidence 46677889999999999998 8899999999998876
Q ss_pred c
Q 010976 344 S 344 (496)
Q Consensus 344 ~ 344 (496)
.
T Consensus 310 ~ 310 (311)
T 3nf1_A 310 Q 310 (311)
T ss_dssp -
T ss_pred c
Confidence 4
No 76
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.67 E-value=6.7e-16 Score=147.48 Aligned_cols=167 Identities=16% Similarity=0.176 Sum_probs=142.1
Q ss_pred hhhhHhhccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh-
Q 010976 129 EEGRSRQRILTFAAKRYANAIER--------NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL- 199 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~~--------~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l- 199 (496)
+..+...|++++|+.+|++++++ +|....++.++|.+|..+|+ +++|+.+|++++.+
T Consensus 50 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~al~~~ 115 (283)
T 3edt_B 50 ALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGK--------------YKEAEPLCKRALEIR 115 (283)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTC--------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhcc--------------HHHHHHHHHHHHHHH
Confidence 44566789999999999999988 46678899999999999999 99999999999999
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHccCcchHHHh
Q 010976 200 -------CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL-NWNSPQALNNWGLALQELSAIVPAREK 271 (496)
Q Consensus 200 -------~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l-~P~~~~a~~~lg~~l~~~g~~~~A~~~ 271 (496)
+|....+++++|.++.. +|++++|+..|++++..+++...- +|....++.++|.++..+|++
T Consensus 116 ~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~------ 185 (283)
T 3edt_B 116 EKVLGKFHPDVAKQLNNLALLCQN----QGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKY------ 185 (283)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCH------
T ss_pred HHHcCCCChHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCH------
Confidence 57778999999999999 999999997666666665544322 566788999999999999999
Q ss_pred hhhHHHHHHHHHHHHHh-------------------------------------------------cCCCHHHHHHHHHH
Q 010976 272 QTIVRTAISKFRAAIQL-------------------------------------------------QFDFHRAIYNLGTV 302 (496)
Q Consensus 272 ~~~~~~Ai~~~~~Al~l-------------------------------------------------~P~~~~a~~~lg~~ 302 (496)
++|+..|++++++ .|....++.++|.+
T Consensus 186 ----~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 261 (283)
T 3edt_B 186 ----QDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGAL 261 (283)
T ss_dssp ----HHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 9999999999986 24456788888999
Q ss_pred HHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcC
Q 010976 303 LYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALK 342 (496)
Q Consensus 303 ~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~ 342 (496)
|..+|+ +.+|..+|++++++.
T Consensus 262 ~~~~g~-------------------~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 262 YRRQGK-------------------LEAAHTLEDCASRNR 282 (283)
T ss_dssp HHHTTC-------------------HHHHHHHHHHHHTTC
T ss_pred HHHcCC-------------------HHHHHHHHHHHHHhh
Confidence 988888 888888888888753
No 77
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.67 E-value=7.1e-17 Score=141.96 Aligned_cols=123 Identities=12% Similarity=0.162 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCc
Q 010976 186 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 265 (496)
Q Consensus 186 ~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 265 (496)
+-.+...|++++.++|++..+++++|.++.. .|++++|+ ..|++++.++|+++.+|+++|.++..+|++
T Consensus 3 ~~~~~~~~~~al~~~p~~~~~~~~~g~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~lg~~~~~~g~~ 71 (148)
T 2vgx_A 3 LGSGGGTIAMLNEISSDTLEQLYSLAFNQYQ----SGXYEDAH-------XVFQALCVLDHYDSRFFLGLGACRQAMGQY 71 (148)
T ss_dssp ---CCCSHHHHTTCCHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred ccchhhhHHHHHcCCHhhHHHHHHHHHHHHH----cCChHHHH-------HHHHHHHHcCcccHHHHHHHHHHHHHHhhH
Confidence 3444567899999999999999999999999 99999999 899999999999999999999999999999
Q ss_pred chHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcH
Q 010976 266 VPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 345 (496)
Q Consensus 266 ~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~ 345 (496)
++|+.+|+++++++|+++.+++++|.+|..+|+ +.+|..+|+++++++|++
T Consensus 72 ----------~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~-------------------~~~A~~~~~~al~~~p~~ 122 (148)
T 2vgx_A 72 ----------DLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGE-------------------LAEAESGLFLAQELIANX 122 (148)
T ss_dssp ----------HHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHTTC
T ss_pred ----------HHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHHCcCC
Confidence 999999999999999999999999999999999 899999999999998886
Q ss_pred HHH
Q 010976 346 SVY 348 (496)
Q Consensus 346 ~~y 348 (496)
+.+
T Consensus 123 ~~~ 125 (148)
T 2vgx_A 123 PEF 125 (148)
T ss_dssp GGG
T ss_pred Ccc
Confidence 643
No 78
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.67 E-value=6.3e-15 Score=145.17 Aligned_cols=186 Identities=9% Similarity=0.017 Sum_probs=161.2
Q ss_pred hhcHHHHHHHHHHhhccchhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc--CCCCCCCCCcchhhhHHH
Q 010976 111 AEQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESA--DNVSLDSTSPSKDALLEE 188 (496)
Q Consensus 111 ~~~~~~A~~~~~~~l~~~~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~--~~~~~~~~~~~~~~~~~~ 188 (496)
..++..++..+...+... ...++|+.++.++|.++|++..+|+.++.++..++ + +++
T Consensus 29 ~~~y~~~~~~~~a~~~~~-------e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~--------------~~e 87 (306)
T 3dra_A 29 DEDYKQIMGLLLALMKAE-------EYSERALHITELGINELASHYTIWIYRFNILKNLPNRN--------------LYD 87 (306)
T ss_dssp CHHHHHHHHHHHHHHHTT-------CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSC--------------HHH
T ss_pred CHHHHHHHHHHHHHHHcC-------CCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHccccc--------------HHH
Confidence 455666666666554333 33468999999999999999999999999999999 7 999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCc
Q 010976 189 ACKKYDEATRLCPTLHDAFYNWAIAISDRAKMR---GRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 265 (496)
Q Consensus 189 A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~---g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 265 (496)
+++++++++.++|++..+|+.++.++....... +++++++ ..+.++++.+|.+..+|++++.++..+|.+
T Consensus 88 eL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL-------~~~~~~l~~~pkny~aW~~R~~vl~~l~~~ 160 (306)
T 3dra_A 88 ELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREF-------DILEAMLSSDPKNHHVWSYRKWLVDTFDLH 160 (306)
T ss_dssp HHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999993221116 6777777 899999999999999999999999999998
Q ss_pred chHHHhhhhHH--HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCC
Q 010976 266 VPAREKQTIVR--TAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKP 343 (496)
Q Consensus 266 ~~A~~~~~~~~--~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p 343 (496)
+ ++++.+.++++.+|.|..+|++.+.++..+++. .....+.++..++.+++.++|
T Consensus 161 ----------~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~-------------~~~~~~~eEl~~~~~aI~~~p 217 (306)
T 3dra_A 161 ----------NDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHL-------------ATDNTIDEELNYVKDKIVKCP 217 (306)
T ss_dssp ----------TCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGG-------------CCHHHHHHHHHHHHHHHHHCS
T ss_pred ----------ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcccc-------------chhhhHHHHHHHHHHHHHhCC
Confidence 7 999999999999999999999999999988751 134468999999999999999
Q ss_pred cHHH
Q 010976 344 SYSV 347 (496)
Q Consensus 344 ~~~~ 347 (496)
.+..
T Consensus 218 ~n~S 221 (306)
T 3dra_A 218 QNPS 221 (306)
T ss_dssp SCHH
T ss_pred CCcc
Confidence 9984
No 79
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.67 E-value=3.7e-15 Score=146.85 Aligned_cols=182 Identities=8% Similarity=-0.024 Sum_probs=160.3
Q ss_pred hcHHHHHHHHHHhhc-cc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHhcCCCCCCCCC
Q 010976 112 EQNNAAMELINSVTG-VD----------EEGRSRQRILTFAAKRYANAIERNPEDYD-ALYNWALVLQESADNVSLDSTS 179 (496)
Q Consensus 112 ~~~~~A~~~~~~~l~-~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~-a~~~lg~~~~~~~~~~~~~~~~ 179 (496)
+..++|...+.+++. .. +..+...|++++|+..|+++++++|.++. +|.++|.++...|+
T Consensus 78 ~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~-------- 149 (308)
T 2ond_A 78 LFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEG-------- 149 (308)
T ss_dssp HHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHC--------
T ss_pred cchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcC--------
Confidence 335899999999998 44 22344579999999999999999999987 99999999999999
Q ss_pred cchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 010976 180 PSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLAL 259 (496)
Q Consensus 180 ~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l 259 (496)
+++|+..|+++++++|.+..+|...+.+... ..|++++|+ ..|+++++.+|+++.+|.++|.++
T Consensus 150 ------~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~---~~~~~~~A~-------~~~~~al~~~p~~~~~~~~~~~~~ 213 (308)
T 2ond_A 150 ------IKSGRMIFKKAREDARTRHHVYVTAALMEYY---CSKDKSVAF-------KIFELGLKKYGDIPEYVLAYIDYL 213 (308)
T ss_dssp ------HHHHHHHHHHHHTSTTCCTHHHHHHHHHHHH---TSCCHHHHH-------HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH---HcCCHHHHH-------HHHHHHHHhCCCcHHHHHHHHHHH
Confidence 9999999999999999998888877666432 169999999 899999999999999999999999
Q ss_pred HHccCcchHHHhhhhHHHHHHHHHHHHHh---cC-CCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHH
Q 010976 260 QELSAIVPAREKQTIVRTAISKFRAAIQL---QF-DFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYI 335 (496)
Q Consensus 260 ~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l---~P-~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~ 335 (496)
..+|++ ++|+..|+++++. +| +...+|.+++..+...|+ +..+..++
T Consensus 214 ~~~g~~----------~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~-------------------~~~a~~~~ 264 (308)
T 2ond_A 214 SHLNED----------NNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGD-------------------LASILKVE 264 (308)
T ss_dssp HTTCCH----------HHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSC-------------------HHHHHHHH
T ss_pred HHCCCH----------HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCC-------------------HHHHHHHH
Confidence 999999 9999999999995 56 478899999999999998 78888999
Q ss_pred HHHHhcCCcHH
Q 010976 336 AAAHALKPSYS 346 (496)
Q Consensus 336 ~~a~~l~p~~~ 346 (496)
.+++++.|+..
T Consensus 265 ~~a~~~~p~~~ 275 (308)
T 2ond_A 265 KRRFTAFREEY 275 (308)
T ss_dssp HHHHHHTTTTT
T ss_pred HHHHHHccccc
Confidence 99999999754
No 80
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.66 E-value=1.3e-15 Score=163.20 Aligned_cols=154 Identities=15% Similarity=0.085 Sum_probs=129.3
Q ss_pred hcHHHHHHHHHHhhccc----------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcc
Q 010976 112 EQNNAAMELINSVTGVD----------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPS 181 (496)
Q Consensus 112 ~~~~~A~~~~~~~l~~~----------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~ 181 (496)
+++++|+..+.+++... +..+..+|++++|+..|+++++++|++..+++++|.+|..+|+
T Consensus 3 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~---------- 72 (568)
T 2vsy_A 3 ADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQR---------- 72 (568)
T ss_dssp ------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTC----------
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCC----------
Confidence 45566666666666544 3446678999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 010976 182 KDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE 261 (496)
Q Consensus 182 ~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~ 261 (496)
+++|+++|+++++++|++..+++++|.+|.. +|++++|+ ..|+++++++|++..++.++|.++..
T Consensus 73 ----~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~l~~~~~~ 137 (568)
T 2vsy_A 73 ----HAEAAVLLQQASDAAPEHPGIALWLGHALED----AGQAEAAA-------AAYTRAHQLLPEEPYITAQLLNWRRR 137 (568)
T ss_dssp ----HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 99999999 89999999999999999999999999
Q ss_pred c---cCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 010976 262 L---SAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLG 300 (496)
Q Consensus 262 ~---g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg 300 (496)
+ |++ ++|+..|+++++.+|++...+..++
T Consensus 138 ~~~~g~~----------~~A~~~~~~al~~~p~~~~~~~~l~ 169 (568)
T 2vsy_A 138 LCDWRAL----------DVLSAQVRAAVAQGVGAVEPFAFLS 169 (568)
T ss_dssp TTCCTTH----------HHHHHHHHHHHHHTCCCSCHHHHTT
T ss_pred hhccccH----------HHHHHHHHHHHhcCCcccChHHHhC
Confidence 9 887 9999999999999999877776665
No 81
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.66 E-value=7.6e-16 Score=138.41 Aligned_cols=132 Identities=14% Similarity=0.057 Sum_probs=119.6
Q ss_pred hHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010976 132 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 211 (496)
Q Consensus 132 ~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg 211 (496)
+...|++++|+..|+++++.+|+++.+|+.+|.+|...|+ +++|+.+|+++++++|++..+++++|
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~~~la 85 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQND--------------YSNSLLAYRQALQLRGENAELYAALA 85 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHCSCHHHHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 3456899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HH-HHHHHHHcCCH--HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHh
Q 010976 212 IA-ISDRAKMRGRT--KEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 288 (496)
Q Consensus 212 ~~-~~~~~~~~g~~--~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l 288 (496)
.+ +.. .|++ ++|+ ..|+++++++|++..+++++|.++..+|++ ++|+..|++++++
T Consensus 86 ~~l~~~----~~~~~~~~A~-------~~~~~al~~~p~~~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~ 144 (177)
T 2e2e_A 86 TVLYYQ----ASQHMTAQTR-------AMIDKALALDSNEITALMLLASDAFMQANY----------AQAIELWQKVMDL 144 (177)
T ss_dssp HHHHHH----TTTCCCHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHT
T ss_pred HHHHHh----cCCcchHHHH-------HHHHHHHHhCCCcHHHHHHHHHHHHHcccH----------HHHHHHHHHHHhh
Confidence 99 778 9998 9999 899999999999999999999999999999 9999999999999
Q ss_pred cCCCHHHHHH
Q 010976 289 QFDFHRAIYN 298 (496)
Q Consensus 289 ~P~~~~a~~~ 298 (496)
+|++......
T Consensus 145 ~p~~~~~~~~ 154 (177)
T 2e2e_A 145 NSPRINRTQL 154 (177)
T ss_dssp CCTTSCHHHH
T ss_pred CCCCccHHHH
Confidence 9998654433
No 82
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.65 E-value=2.6e-15 Score=133.45 Aligned_cols=121 Identities=17% Similarity=0.138 Sum_probs=112.8
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 010976 152 NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELW 231 (496)
Q Consensus 152 ~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~ 231 (496)
++.++.+++.+|.+++..|+ +++|+.+|+++++++|++..+|+++|.+|.. +|++++|+
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~----~g~~~~A~--- 65 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKE--------------YSKAIDLYTQALSIAPANPIYLSNRAAAYSA----SGQHEKAA--- 65 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH----TTCHHHHH---
T ss_pred hhhhHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCcCHHHHHHHHHHHHH----ccCHHHHH---
Confidence 45568899999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcc
Q 010976 232 KQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLA 307 (496)
Q Consensus 232 ~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g 307 (496)
..|+++++++|+++.+|+++|.+|..+|++ ++|+.+|+++++++|++..++++++.......
T Consensus 66 ----~~~~~al~~~p~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~ 127 (164)
T 3sz7_A 66 ----EDAELATVVDPKYSKAWSRLGLARFDMADY----------KGAKEAYEKGIEAEGNGGSDAMKRGLETTKRK 127 (164)
T ss_dssp ----HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHhCCCCHHHHHHHHHHHHHccCH----------HHHHHHHHHHHHhCCCchHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999 99999999999999999998888777655443
No 83
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.64 E-value=1.4e-14 Score=121.77 Aligned_cols=134 Identities=31% Similarity=0.430 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010976 157 DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATK 236 (496)
Q Consensus 157 ~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~ 236 (496)
.+++.+|.++...|+ +++|+..|+++++.+|++..+++.+|.++.. .|++++|+ .
T Consensus 2 ~~~~~l~~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~-------~ 56 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGD--------------YDEAIEYYQKALELDPRSAEAWYNLGNAYYK----QGDYDEAI-------E 56 (136)
T ss_dssp HHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCHHHHH-------H
T ss_pred cHHHHHHHHHHHcCc--------------HHHHHHHHHHHHHcCCcchhHHHHHHHHHHH----hcCHHHHH-------H
Confidence 578999999999999 9999999999999999999999999999999 99999999 7
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCC
Q 010976 237 NYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGT 316 (496)
Q Consensus 237 ~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~ 316 (496)
.|++++..+|.+..+++++|.++...|++ ++|+..|+++++..|++..+++.+|.++...|+
T Consensus 57 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-------- 118 (136)
T 2fo7_A 57 YYQKALELDPRSAEAWYNLGNAYYKQGDY----------DEAIEYYQKALELDPRSAEAWYNLGNAYYKQGD-------- 118 (136)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC--------
T ss_pred HHHHHHHHCCCchHHHHHHHHHHHHhcCH----------HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHcc--------
Confidence 88888899999999999999999999999 999999999999999999999999999999998
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHhcCCc
Q 010976 317 VNPREVSPNELYSQSAIYIAAAHALKPS 344 (496)
Q Consensus 317 ~~~~~~~~~~~~~~A~~~~~~a~~l~p~ 344 (496)
+..|..+|.+++.++|.
T Consensus 119 -----------~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 119 -----------YDEAIEYYQKALELDPR 135 (136)
T ss_dssp -----------HHHHHHHHHHHHHHSTT
T ss_pred -----------HHHHHHHHHHHHccCCC
Confidence 88999999999998875
No 84
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.63 E-value=5.3e-14 Score=135.33 Aligned_cols=182 Identities=15% Similarity=0.144 Sum_probs=146.6
Q ss_pred hhhhcHHHHHHHHHHhhccc--------hhhhHh----hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hcCC
Q 010976 109 QLAEQNNAAMELINSVTGVD--------EEGRSR----QRILTFAAKRYANAIERNPEDYDALYNWALVLQE----SADN 172 (496)
Q Consensus 109 ~~~~~~~~A~~~~~~~l~~~--------~~~~~~----~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~----~~~~ 172 (496)
...+++++|+.++.+++... +..+.. .+++++|+.+|+++++.+ ++.+++++|.+|.. .++
T Consensus 17 ~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~- 93 (273)
T 1ouv_A 17 YKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQN- 93 (273)
T ss_dssp HHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCC-
T ss_pred HhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccC-
Confidence 34567888888888877643 334556 789999999999999885 88999999999999 888
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHH
Q 010976 173 VSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQAL 252 (496)
Q Consensus 173 ~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~ 252 (496)
+++|+..|++++++ +++.+++++|.+|.......+++++|+ .+|+++++.+ ++.++
T Consensus 94 -------------~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~~~A~-------~~~~~a~~~~--~~~a~ 149 (273)
T 1ouv_A 94 -------------TNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDFKKAV-------EYFTKACDLN--DGDGC 149 (273)
T ss_dssp -------------HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH-------HHHHHHHHTT--CHHHH
T ss_pred -------------HHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCHHHHH-------HHHHHHHhcC--cHHHH
Confidence 99999999999987 488999999988864111157888888 6777777765 78899
Q ss_pred HHHHHHHHH----ccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----cchhHHhccCCCCCCCCCc
Q 010976 253 NNWGLALQE----LSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYG----LAEDTLRTGGTVNPREVSP 324 (496)
Q Consensus 253 ~~lg~~l~~----~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~----~g~~~~a~~~~~~~~~~~~ 324 (496)
+++|.+|.. .+++ ++|+.+|+++++. +++.+++++|.+|.. .++
T Consensus 150 ~~lg~~~~~~~~~~~~~----------~~A~~~~~~a~~~--~~~~a~~~lg~~~~~g~~~~~~---------------- 201 (273)
T 1ouv_A 150 TILGSLYDAGRGTPKDL----------KKALASYDKACDL--KDSPGCFNAGNMYHHGEGATKN---------------- 201 (273)
T ss_dssp HHHHHHHHHTSSSCCCH----------HHHHHHHHHHHHT--TCHHHHHHHHHHHHHTCSSCCC----------------
T ss_pred HHHHHHHHcCCCCCCCH----------HHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCcc----------------
Confidence 999999998 8888 9999999999887 468899999999988 777
Q ss_pred HHHHHHHHHHHHHHHhcCCcHHHH
Q 010976 325 NELYSQSAIYIAAAHALKPSYSVY 348 (496)
Q Consensus 325 ~~~~~~A~~~~~~a~~l~p~~~~y 348 (496)
+.+|..+|+++++.+|....+
T Consensus 202 ---~~~A~~~~~~a~~~~~~~a~~ 222 (273)
T 1ouv_A 202 ---FKEALARYSKACELENGGGCF 222 (273)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHH
T ss_pred ---HHHHHHHHHHHHhCCCHHHHH
Confidence 888899999998887744433
No 85
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.63 E-value=2.6e-14 Score=142.49 Aligned_cols=193 Identities=9% Similarity=0.017 Sum_probs=164.9
Q ss_pred hhhcHHHHHHHHHHhhccchhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc-CCCCCCCCCcchhhhHHH
Q 010976 110 LAEQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESA-DNVSLDSTSPSKDALLEE 188 (496)
Q Consensus 110 ~~~~~~~A~~~~~~~l~~~~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~-~~~~~~~~~~~~~~~~~~ 188 (496)
...++..++..+...+... +..++|+..+.++|.++|++..+|+.++.++..++ . +++
T Consensus 49 y~~~y~~~~~~~r~~~~~~-------e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~--------------l~e 107 (349)
T 3q7a_A 49 YSEEYKDAMDYFRAIAAKE-------EKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKS--------------LED 107 (349)
T ss_dssp CCHHHHHHHHHHHHHHHTT-------CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC--------------HHH
T ss_pred eCHHHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhh--------------HHH
Confidence 4566777777776665443 44578999999999999999999999999999999 6 999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcc
Q 010976 189 ACKKYDEATRLCPTLHDAFYNWAIAISDRAKMR-G-RTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIV 266 (496)
Q Consensus 189 A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~-g-~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~ 266 (496)
+++++++++..+|++..+|+.++.++.. + + ++++++ ..+.++++.+|.|..+|+.++.++..+|.++
T Consensus 108 EL~~~~~~L~~nPKny~aW~hR~wlL~~----l~~~~~~~EL-------~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 108 ELRLMNEFAVQNLKSYQVWHHRLLLLDR----ISPQDPVSEI-------EYIHGSLLPDPKNYHTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHH----HCCSCCHHHH-------HHHHHHTSSCTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHH----hcCCChHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999999998 7 7 777777 8999999999999999999999999999881
Q ss_pred hHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHH
Q 010976 267 PAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 346 (496)
Q Consensus 267 ~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~ 346 (496)
.+ ....+.++++++.++++.+|.|..+|++++.++..+++. ......+.++..++.+++.++|++.
T Consensus 177 ~~--~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~------------~~~~~~~~eELe~~~~aI~~~P~n~ 242 (349)
T 3q7a_A 177 RI--SEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGA------------ETSSRSLQDELIYILKSIHLIPHNV 242 (349)
T ss_dssp CC--CHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTC------------CCCHHHHHHHHHHHHHHHHHCTTCH
T ss_pred cc--chhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcccc------------ccchHHHHHHHHHHHHHHHhCCCCH
Confidence 00 011223999999999999999999999999999988751 1234568999999999999999998
Q ss_pred HH
Q 010976 347 VY 348 (496)
Q Consensus 347 ~y 348 (496)
..
T Consensus 243 Sa 244 (349)
T 3q7a_A 243 SA 244 (349)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 86
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.63 E-value=2.2e-14 Score=138.02 Aligned_cols=181 Identities=14% Similarity=0.137 Sum_probs=156.0
Q ss_pred hhcHHHHHHHHHHhhccc--------hhhhHh----hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hcCCCC
Q 010976 111 AEQNNAAMELINSVTGVD--------EEGRSR----QRILTFAAKRYANAIERNPEDYDALYNWALVLQE----SADNVS 174 (496)
Q Consensus 111 ~~~~~~A~~~~~~~l~~~--------~~~~~~----~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~----~~~~~~ 174 (496)
.+++++|+.++.+++... +..+.. .+++++|+.+|+++++.+ ++.+++++|.+|.. .++
T Consensus 55 ~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~--- 129 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRD--- 129 (273)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCC---
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccC---
Confidence 688999999999988765 334556 899999999999999984 89999999999999 899
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Q 010976 175 LDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNN 254 (496)
Q Consensus 175 ~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~ 254 (496)
+++|+.+|+++++++ +..+++++|.+|.......+++++|+ .+|+++++. +++.++++
T Consensus 130 -----------~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~-------~~~~~a~~~--~~~~a~~~ 187 (273)
T 1ouv_A 130 -----------FKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKAL-------ASYDKACDL--KDSPGCFN 187 (273)
T ss_dssp -----------HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHH-------HHHHHHHHT--TCHHHHHH
T ss_pred -----------HHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHH-------HHHHHHHHC--CCHHHHHH
Confidence 999999999999986 78899999999874111157888888 777777776 47899999
Q ss_pred HHHHHHH----ccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----cchhHHhccCCCCCCCCCcHH
Q 010976 255 WGLALQE----LSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYG----LAEDTLRTGGTVNPREVSPNE 326 (496)
Q Consensus 255 lg~~l~~----~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~----~g~~~~a~~~~~~~~~~~~~~ 326 (496)
+|.+|.. .+++ ++|+.+|+++++.+| +.+++++|.+|.. .++
T Consensus 188 lg~~~~~g~~~~~~~----------~~A~~~~~~a~~~~~--~~a~~~l~~~~~~g~~~~~~------------------ 237 (273)
T 1ouv_A 188 AGNMYHHGEGATKNF----------KEALARYSKACELEN--GGGCFNLGAMQYNGEGVTRN------------------ 237 (273)
T ss_dssp HHHHHHHTCSSCCCH----------HHHHHHHHHHHHTTC--HHHHHHHHHHHHTTSSSSCC------------------
T ss_pred HHHHHHcCCCCCccH----------HHHHHHHHHHHhCCC--HHHHHHHHHHHHcCCCcccC------------------
Confidence 9999999 8998 999999999999866 8999999999998 776
Q ss_pred HHHHHHHHHHHHHhcCCcHHHHH
Q 010976 327 LYSQSAIYIAAAHALKPSYSVYS 349 (496)
Q Consensus 327 ~~~~A~~~~~~a~~l~p~~~~y~ 349 (496)
+.+|..+|++++++.|....+.
T Consensus 238 -~~~A~~~~~~a~~~~~~~a~~~ 259 (273)
T 1ouv_A 238 -EKQAIENFKKGCKLGAKGACDI 259 (273)
T ss_dssp -STTHHHHHHHHHHHTCHHHHHH
T ss_pred -HHHHHHHHHHHHHcCCHHHHHH
Confidence 7789999999999999876544
No 87
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.63 E-value=3.3e-16 Score=163.59 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=130.3
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC-----------
Q 010976 135 QRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL----------- 203 (496)
Q Consensus 135 ~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~----------- 203 (496)
.+++++|+..|+.++..+|+.+.+++++|.+++.+|+ |++|+..|++|++++|++
T Consensus 247 l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~--------------~~~A~~~y~~Al~~~p~~~~~~~~~~~~~ 312 (457)
T 1kt0_A 247 LKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGK--------------YMQAVIQYGKIVSWLEMEYGLSEKESKAS 312 (457)
T ss_dssp EEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHTTCCSCCHHHHHHH
T ss_pred hhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCC--------------HHHHHHHHHHHHHHhcccccCChHHHHHH
Confidence 4678889999999999999999999999999999999 999999999999999998
Q ss_pred ----HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHH
Q 010976 204 ----HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAI 279 (496)
Q Consensus 204 ----~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai 279 (496)
..+|+++|.+|.. +|++++|+ .+|+++++++|+++.+|+++|.+|..+|++ ++|+
T Consensus 313 ~~~~~~~~~nla~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~a~~~~g~a~~~~g~~----------~~A~ 371 (457)
T 1kt0_A 313 ESFLLAAFLNLAMCYLK----LREYTKAV-------ECCDKALGLDSANEKGLYRRGEAQLLMNEF----------ESAK 371 (457)
T ss_dssp HHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHTTCH----------HHHH
T ss_pred HHHHHHHHHHHHHHHHH----hcCHHHHH-------HHHHHHHhcCCccHHHHHHHHHHHHHccCH----------HHHH
Confidence 7999999999999 99999999 899999999999999999999999999999 9999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010976 280 SKFRAAIQLQFDFHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 280 ~~~~~Al~l~P~~~~a~~~lg~~~~~~g~ 308 (496)
..|++|++++|++..++.+++.++..+++
T Consensus 372 ~~~~~al~l~P~~~~a~~~l~~~~~~~~~ 400 (457)
T 1kt0_A 372 GDFEKVLEVNPQNKAARLQISMCQKKAKE 400 (457)
T ss_dssp HHHHHHHTTC----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997
No 88
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.62 E-value=4.6e-15 Score=125.40 Aligned_cols=122 Identities=19% Similarity=0.159 Sum_probs=116.5
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 010976 152 NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELW 231 (496)
Q Consensus 152 ~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~ 231 (496)
.|.+..+++.+|.++...|+ +++|+..|++++.++|++..+++++|.++.. .|++++|+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~al~~~~~~~~~~~~la~~~~~----~~~~~~A~--- 70 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGD--------------YPQAMKHYTEAIKRNPKDAKLYSNRAACYTK----LLEFQLAL--- 70 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTC--------------SHHHHHHHHHHHTTCTTCHHHHHHHHHHHTT----TTCHHHHH---
T ss_pred CcccHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH----hccHHHHH---
Confidence 46778999999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010976 232 KQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 232 ~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~ 308 (496)
..|+++++++|++..+++++|.++..+|++ ++|+..|+++++++|++..++.+++.++..+|+
T Consensus 71 ----~~~~~a~~~~~~~~~~~~~la~~~~~~~~~----------~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 71 ----KDCEECIQLEPTFIKGYTRKAAALEAMKDY----------TKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp ----HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred ----HHHHHHHHhCCCchHHHHHHHHHHHHHhhH----------HHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 889999999999999999999999999999 999999999999999999999999999988763
No 89
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.62 E-value=7.7e-16 Score=156.64 Aligned_cols=189 Identities=16% Similarity=0.135 Sum_probs=155.0
Q ss_pred hhhhhcHHHHHHHHHHhhccc--------------hhhhHhhccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHH
Q 010976 108 HQLAEQNNAAMELINSVTGVD--------------EEGRSRQRILTFAAKRYANAIER------NPEDYDALYNWALVLQ 167 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~--------------~~~~~~~g~~~~Ai~~~~~al~~------~P~~~~a~~~lg~~~~ 167 (496)
+...|+++.|+..+.+++... +..+...|++++|+.+|++++++ .|....++..+|.+|.
T Consensus 58 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 137 (411)
T 4a1s_A 58 LCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK 137 (411)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH
Confidence 456788999999998888754 33456679999999999999998 6778899999999999
Q ss_pred HhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHHHHcCC----------HHHHHHHH
Q 010976 168 ESADNVSLDSTSPSKDALLEEACKKYDEATRL------CPTLHDAFYNWAIAISDRAKMRGR----------TKEAEELW 231 (496)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l------~P~~~~a~~~lg~~~~~~~~~~g~----------~~eA~~~~ 231 (496)
.+|+ +++|+.+|++++.+ .|....+++++|.+|.. +|+ +.+|...|
T Consensus 138 ~~g~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~~~~~~~~~~~a~~~~ 199 (411)
T 4a1s_A 138 VMGR--------------FDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHA----KGKHLGQRNPGKFGDDVKEAL 199 (411)
T ss_dssp HTTC--------------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----HHHHHHHHSTTCCCHHHHHHH
T ss_pred HCCC--------------HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH----cCcccccccchhhhhhhhHHH
Confidence 9999 99999999999999 66678899999999999 999 55555556
Q ss_pred HHHHHHHHHHHhcC------CCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHH------HHHHH
Q 010976 232 KQATKNYEKAVQLN------WNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHR------AIYNL 299 (496)
Q Consensus 232 ~~A~~~~~~Al~l~------P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~------a~~~l 299 (496)
++|+..|++++++. +....+++++|.++..+|++ ++|+.+|++++++.+.... +++++
T Consensus 200 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~~~l 269 (411)
T 4a1s_A 200 TRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDF----------QAAIEHHQERLRIAREFGDRAAERRANSNL 269 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCh----------HHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 66666666666542 44567999999999999999 9999999999998765433 89999
Q ss_pred HHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCC
Q 010976 300 GTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKP 343 (496)
Q Consensus 300 g~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p 343 (496)
|.+|..+|+ +.+|..+|++++.+.+
T Consensus 270 a~~~~~~g~-------------------~~~A~~~~~~al~~~~ 294 (411)
T 4a1s_A 270 GNSHIFLGQ-------------------FEDAAEHYKRTLALAV 294 (411)
T ss_dssp HHHHHTTTC-------------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHCcC-------------------HHHHHHHHHHHHHHHH
Confidence 999999998 5666666666666554
No 90
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.62 E-value=9.7e-16 Score=133.13 Aligned_cols=121 Identities=12% Similarity=0.147 Sum_probs=110.4
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHH
Q 010976 190 CKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAR 269 (496)
Q Consensus 190 ~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~ 269 (496)
-..|++++.++|++..+++++|.++.. .|++++|+ ..|++++.++|+++.+|+++|.++..+|++
T Consensus 4 ~~~l~~al~~~p~~~~~~~~~a~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~lg~~~~~~g~~---- 68 (142)
T 2xcb_A 4 GGTLAMLRGLSEDTLEQLYALGFNQYQ----AGKWDDAQ-------KIFQALCMLDHYDARYFLGLGACRQSLGLY---- 68 (142)
T ss_dssp -----CCTTCCHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----
T ss_pred chhHHHHHcCCHHHHHHHHHHHHHHHH----HccHHHHH-------HHHHHHHHhCCccHHHHHHHHHHHHHHhhH----
Confidence 357888999999999999999999999 99999999 899999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHH
Q 010976 270 EKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYS 349 (496)
Q Consensus 270 ~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~ 349 (496)
++|+.+|+++++++|+++.+++++|.+|..+|+ +..|..+|+++++++|+++.+.
T Consensus 69 ------~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~-------------------~~~A~~~~~~al~~~p~~~~~~ 123 (142)
T 2xcb_A 69 ------EQALQSYSYGALMDINEPRFPFHAAECHLQLGD-------------------LDGAESGFYSARALAAAQPAHE 123 (142)
T ss_dssp ------HHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHHTCGGGH
T ss_pred ------HHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCCCCcchH
Confidence 999999999999999999999999999999999 8999999999999999776444
Q ss_pred H
Q 010976 350 S 350 (496)
Q Consensus 350 ~ 350 (496)
.
T Consensus 124 ~ 124 (142)
T 2xcb_A 124 A 124 (142)
T ss_dssp H
T ss_pred H
Confidence 3
No 91
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.62 E-value=1.8e-14 Score=132.91 Aligned_cols=145 Identities=16% Similarity=0.187 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010976 156 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQAT 235 (496)
Q Consensus 156 ~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~ 235 (496)
...++++|.++...|+ +++|+..|++++ +| ++.+++++|.+|.. +|++++|+
T Consensus 6 ~~~~~~~g~~~~~~~~--------------~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~----~g~~~~A~------- 57 (213)
T 1hh8_A 6 AISLWNEGVLAADKKD--------------WKGALDAFSAVQ--DP-HSRICFNIGCMYTI----LKNMTEAE------- 57 (213)
T ss_dssp HHHHHHHHHHHHHTTC--------------HHHHHHHHHTSS--SC-CHHHHHHHHHHHHH----TTCHHHHH-------
T ss_pred HHHHHHHHHHHHHhCC--------------HHHHHHHHHHHc--CC-ChHHHHHHHHHHHH----cCCHHHHH-------
Confidence 3457899999999999 999999999995 44 78999999999999 99999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCH----------------HHHHHH
Q 010976 236 KNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH----------------RAIYNL 299 (496)
Q Consensus 236 ~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~----------------~a~~~l 299 (496)
..|+++++++|+++.+++++|.++..+|++ ++|+..|++++++.|++. .+++++
T Consensus 58 ~~~~~al~~~~~~~~~~~~lg~~~~~~~~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (213)
T 1hh8_A 58 KAFTRSINRDKHLAVAYFQRGMLYYQTEKY----------DLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNI 127 (213)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHH
T ss_pred HHHHHHHHhCccchHHHHHHHHHHHHcccH----------HHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHH
Confidence 899999999999999999999999999999 999999999999888776 999999
Q ss_pred HHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHH--HHHHHHHhhhc
Q 010976 300 GTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS--VYSSALRLVRS 357 (496)
Q Consensus 300 g~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~--~y~~al~~~~~ 357 (496)
|.++..+|+ +..|..+|+++++++|... .+..++..+..
T Consensus 128 ~~~~~~~g~-------------------~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~ 168 (213)
T 1hh8_A 128 AFMYAKKEE-------------------WKKAEEQLALATSMKSEPRHSKIDKAMECVWK 168 (213)
T ss_dssp HHHHHHTTC-------------------HHHHHHHHHHHHTTCCSGGGGHHHHHHHHHHT
T ss_pred HHHHHHccC-------------------HHHHHHHHHHHHHcCcccccchHHHHHHHHHh
Confidence 999999999 8999999999999999764 55666655543
No 92
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.62 E-value=2.9e-14 Score=119.77 Aligned_cols=128 Identities=28% Similarity=0.349 Sum_probs=121.3
Q ss_pred hhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHH
Q 010976 130 EGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYN 209 (496)
Q Consensus 130 ~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~ 209 (496)
..+...|++++|+..|+++++.+|++..+++.+|.++...|+ +++|+..|++++..+|.+..++++
T Consensus 9 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~ 74 (136)
T 2fo7_A 9 NAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGD--------------YDEAIEYYQKALELDPRSAEAWYN 74 (136)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcC--------------HHHHHHHHHHHHHHCCCchHHHHH
Confidence 345667999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhc
Q 010976 210 WAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ 289 (496)
Q Consensus 210 lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~ 289 (496)
+|.++.. .|++++|+ ..|++++..+|.+..+++.+|.++...|++ ++|+..|++++.++
T Consensus 75 l~~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~la~~~~~~~~~----------~~A~~~~~~~~~~~ 133 (136)
T 2fo7_A 75 LGNAYYK----QGDYDEAI-------EYYQKALELDPRSAEAWYNLGNAYYKQGDY----------DEAIEYYQKALELD 133 (136)
T ss_dssp HHHHHHT----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHTTTCH----------HHHHHHHHHHHHHS
T ss_pred HHHHHHH----hcCHHHHH-------HHHHHHHHhCCCChHHHHHHHHHHHHHccH----------HHHHHHHHHHHccC
Confidence 9999999 99999999 788889999999999999999999999999 99999999999999
Q ss_pred CCC
Q 010976 290 FDF 292 (496)
Q Consensus 290 P~~ 292 (496)
|++
T Consensus 134 ~~~ 136 (136)
T 2fo7_A 134 PRS 136 (136)
T ss_dssp TTC
T ss_pred CCC
Confidence 863
No 93
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.61 E-value=1.3e-15 Score=145.52 Aligned_cols=163 Identities=21% Similarity=0.238 Sum_probs=141.7
Q ss_pred hhccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh------
Q 010976 134 RQRILTFAAKRYANAIER--------NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL------ 199 (496)
Q Consensus 134 ~~g~~~~Ai~~~~~al~~--------~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l------ 199 (496)
..|++++|+.+|++++++ +|....++..+|.+|...|+ +++|+.+|++++.+
T Consensus 13 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~al~~~~~~~~ 78 (283)
T 3edt_B 13 GLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNK--------------YKEAAHLLNDALAIREKTLG 78 (283)
T ss_dssp CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHccc--------------HHHHHHHHHHHHHHHHHHcC
Confidence 346677777777777763 36678899999999999999 99999999999988
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHccCcchHHHhhhhHH
Q 010976 200 --CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL-NWNSPQALNNWGLALQELSAIVPAREKQTIVR 276 (496)
Q Consensus 200 --~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l-~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~ 276 (496)
+|....+++++|.++.. +|++++|++.|++|+..+++.... +|....+++++|.++..+|++ +
T Consensus 79 ~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~----------~ 144 (283)
T 3edt_B 79 KDHPAVAATLNNLAVLYGK----RGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKA----------E 144 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCH----------H
T ss_pred CcchHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCH----------H
Confidence 46678899999999999 999999998888888777766544 367789999999999999999 9
Q ss_pred HHHHHHHHHHHh--------cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCC
Q 010976 277 TAISKFRAAIQL--------QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKP 343 (496)
Q Consensus 277 ~Ai~~~~~Al~l--------~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p 343 (496)
+|+..|++++++ +|....++.++|.++..+|+ +..|..+|++++.+.+
T Consensus 145 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 145 EVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGK-------------------YQDAETLYKEILTRAH 200 (283)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHHHH
Confidence 999999999999 77788999999999999999 8899999999887643
No 94
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.61 E-value=4e-15 Score=130.86 Aligned_cols=119 Identities=17% Similarity=0.222 Sum_probs=99.7
Q ss_pred CcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHH---HHHHHHHHHHHHHHHHHhcCCCCHHHHHHH
Q 010976 179 SPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTK---EAEELWKQATKNYEKAVQLNWNSPQALNNW 255 (496)
Q Consensus 179 ~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~---eA~~~~~~A~~~~~~Al~l~P~~~~a~~~l 255 (496)
...+.+.|++|++.|+++++++|+++++|+++|.++.. +++++ +|++.+++|+..|++||+++|++..+|+++
T Consensus 11 ~~~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~----l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~L 86 (158)
T 1zu2_A 11 EFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLE----LSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCI 86 (158)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----hcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHH
Confidence 34567779999999999999999999999999999999 77664 677888999999999999999999999999
Q ss_pred HHHHHHccCcchH-HHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 010976 256 GLALQELSAIVPA-REKQTIVRTAISKFRAAIQLQFDFHRAIYNLGT 301 (496)
Q Consensus 256 g~~l~~~g~~~~A-~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~ 301 (496)
|.+|..+|++..- ....|++++|+.+|++|++++|++...+.++..
T Consensus 87 G~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~ 133 (158)
T 1zu2_A 87 GNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEM 133 (158)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 9999998732110 223355699999999999999998765555443
No 95
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.61 E-value=1.6e-14 Score=141.22 Aligned_cols=141 Identities=11% Similarity=0.008 Sum_probs=135.2
Q ss_pred hCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Q 010976 151 RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEEL 230 (496)
Q Consensus 151 ~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~ 230 (496)
..|++.+.++.+|..+...|+ +++|+..|+++++++|++..+++++|.++.. +|++++|+
T Consensus 112 ~lp~~~~~~~~~a~~~~~~g~--------------~~~A~~~~~~al~~~P~~~~a~~~la~~~~~----~g~~~~A~-- 171 (287)
T 3qou_A 112 VLPREEELXAQQAMQLMQESN--------------YTDALPLLXDAWQLSNQNGEIGLLLAETLIA----LNRSEDAE-- 171 (287)
T ss_dssp HSCCHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH----TTCHHHHH--
T ss_pred HcCCchhhHHHHHHHHHhCCC--------------HHHHHHHHHHHHHhCCcchhHHHHHHHHHHH----CCCHHHHH--
Confidence 349999999999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhH
Q 010976 231 WKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDT 310 (496)
Q Consensus 231 ~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~ 310 (496)
..|++++..+|+....+.+.+..+...++. ++|+..|+++++++|++..+++++|.+|...|+
T Consensus 172 -----~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~----------~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~-- 234 (287)
T 3qou_A 172 -----AVLXTIPLQDQDTRYQGLVAQIELLXQAAD----------TPEIQQLQQQVAENPEDAALATQLALQLHQVGR-- 234 (287)
T ss_dssp -----HHHTTSCGGGCSHHHHHHHHHHHHHHHHTS----------CHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--
T ss_pred -----HHHHhCchhhcchHHHHHHHHHHHHhhccc----------CccHHHHHHHHhcCCccHHHHHHHHHHHHHccc--
Confidence 899999999998888888888889999999 999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcH
Q 010976 311 LRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 345 (496)
Q Consensus 311 ~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~ 345 (496)
+.+|...|.++++.+|++
T Consensus 235 -----------------~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 235 -----------------NEEALELLFGHLRXDLTA 252 (287)
T ss_dssp -----------------HHHHHHHHHHHHHHCTTG
T ss_pred -----------------HHHHHHHHHHHHhccccc
Confidence 899999999999999988
No 96
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.61 E-value=1.2e-14 Score=121.86 Aligned_cols=124 Identities=25% Similarity=0.255 Sum_probs=117.5
Q ss_pred HhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Q 010976 150 ERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEE 229 (496)
Q Consensus 150 ~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~ 229 (496)
..+|.+..+++.+|.++...|+ +++|+..|++++.++|++..+++++|.++.. .|++++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~- 66 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVEN--------------FEAAVHFYGKAIELNPANAVYFCNRAAAYSK----LGNYAGAV- 66 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-
T ss_pred hcchhhhHHHHHHHHHHHHccC--------------HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH----hhchHHHH-
Confidence 3456678899999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010976 230 LWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 230 ~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~ 308 (496)
..|++++.++|+++.+++++|.++..+|++ ++|+..|+++++++|++..++.++|.++..+|+
T Consensus 67 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 67 ------QDCERAICIDPAYSKAYGRMGLALSSLNKH----------VEAVAYYKKALELDPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp ------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTT
T ss_pred ------HHHHHHHhcCccCHHHHHHHHHHHHHhCCH----------HHHHHHHHHHHhcCccchHHHHHHHHHHHHHhc
Confidence 888999999999999999999999999999 999999999999999999999999999998886
No 97
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.61 E-value=3.7e-14 Score=151.76 Aligned_cols=186 Identities=10% Similarity=0.013 Sum_probs=155.5
Q ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 010976 137 ILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISD 216 (496)
Q Consensus 137 ~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~ 216 (496)
..++|+..+.++|.++|++..+|+.++.++..+++.. ........+++++++++++++.+|++..+|++++.++..
T Consensus 44 ~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~----~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~ 119 (567)
T 1dce_A 44 LDESVLELTSQILGANPDFATLWNCRREVLQHLETEK----SPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSR 119 (567)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTS----CHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhccccc----chhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 3468899999999999999999999999999988610 001123348999999999999999999999999999999
Q ss_pred HHHHcC--CHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc-CcchHHHhhhhHHHHHHHHHHHHHhcCCCH
Q 010976 217 RAKMRG--RTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELS-AIVPAREKQTIVRTAISKFRAAIQLQFDFH 293 (496)
Q Consensus 217 ~~~~~g--~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g-~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~ 293 (496)
.+ ++++++ +.+.++++++|.+..+|++++.++..+| .+ +++++++.++++.+|.+.
T Consensus 120 ----l~~~~~~~el-------~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~----------~~el~~~~~~I~~~p~n~ 178 (567)
T 1dce_A 120 ----LPEPNWAREL-------ELCARFLEADERNFHCWDYRRFVAAQAAVAP----------AEELAFTDSLITRNFSNY 178 (567)
T ss_dssp ----CSSCCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTCCCH----------HHHHHHHHTTTTTTCCCH
T ss_pred ----cccccHHHHH-------HHHHHHHhhccccccHHHHHHHHHHHcCCCh----------HHHHHHHHHHHHHCCCCc
Confidence 99 668888 8999999999999999999999999999 77 999999999999999999
Q ss_pred HHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Q 010976 294 RAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSAL 352 (496)
Q Consensus 294 ~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al 352 (496)
.+|+++|.++..+++...+. .........+.++.+++.+|+.++|++.....-+
T Consensus 179 saW~~r~~ll~~l~~~~~~~-----~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~ 232 (567)
T 1dce_A 179 SSWHYRSCLLPQLHPQPDSG-----PQGRLPENVLLKELELVQNAFFTDPNDQSAWFYH 232 (567)
T ss_dssp HHHHHHHHHHHHHSCCCCSS-----SCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHH
T ss_pred cHHHHHHHHHHhhccccccc-----ccccccHHHHHHHHHHHHHHHhhCCCCccHHHHH
Confidence 99999999999875421000 0001124568999999999999999988443333
No 98
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.61 E-value=1.2e-13 Score=137.07 Aligned_cols=199 Identities=10% Similarity=0.067 Sum_probs=159.2
Q ss_pred HHHHHHHHHhhccchh----------hhHhhcc----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCC
Q 010976 115 NAAMELINSVTGVDEE----------GRSRQRI----------LTFAAKRYANAIERNPEDYDALYNWALVLQESADNVS 174 (496)
Q Consensus 115 ~~A~~~~~~~l~~~~~----------~~~~~g~----------~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~ 174 (496)
++|+.++..++..++. .....+. +++++.++..++..+|.+..+|+.++.++..+++
T Consensus 47 ~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~--- 123 (331)
T 3dss_A 47 ESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPE--- 123 (331)
T ss_dssp HHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSS---
T ss_pred HHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCc---
Confidence 3577777777776621 1111222 7899999999999999999999999999999983
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHhcCCCCHHHHH
Q 010976 175 LDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGR-TKEAEELWKQATKNYEKAVQLNWNSPQALN 253 (496)
Q Consensus 175 ~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~-~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~ 253 (496)
..+++++.++.++++++|.|..+|++++.++.. .|. +++++ +++.++++.+|.|..+|+
T Consensus 124 ---------~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~----l~~~~~eel-------~~~~~~I~~~p~N~SAW~ 183 (331)
T 3dss_A 124 ---------PNWARELELCARFLEADERNFHCWDYRRFVAAQ----AAVAPAEEL-------AFTDSLITRNFSNYSSWH 183 (331)
T ss_dssp ---------CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCCHHHHH-------HHHHHHHHHCSCCHHHHH
T ss_pred ---------ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hCcCHHHHH-------HHHHHHHHHCCCCHHHHH
Confidence 018999999999999999999999999999999 998 57777 899999999999999999
Q ss_pred HHHHHHHHccCcchH----HHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc-chhHHhccCCCCCCCCC--cHH
Q 010976 254 NWGLALQELSAIVPA----REKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGL-AEDTLRTGGTVNPREVS--PNE 326 (496)
Q Consensus 254 ~lg~~l~~~g~~~~A----~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~-g~~~~a~~~~~~~~~~~--~~~ 326 (496)
+++.++..++....+ ....+.++++++++.+++.++|++..+|+.+..++... |.. ..+ ...
T Consensus 184 ~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~~~~~-----------~~~~~~~~ 252 (331)
T 3dss_A 184 YRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAGSGRC-----------ELSVEKST 252 (331)
T ss_dssp HHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSSSCGG-----------GCCHHHHH
T ss_pred HHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCcc-----------ccchHHHH
Confidence 999999988442111 11225569999999999999999999998666655544 321 111 124
Q ss_pred HHHHHHHHHHHHHhcCCcHHH
Q 010976 327 LYSQSAIYIAAAHALKPSYSV 347 (496)
Q Consensus 327 ~~~~A~~~~~~a~~l~p~~~~ 347 (496)
.+.+++.++.++++++|++..
T Consensus 253 ~l~~el~~~~elle~~pd~~w 273 (331)
T 3dss_A 253 VLQSELESCKELQELEPENKW 273 (331)
T ss_dssp HHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHhhCcccch
Confidence 689999999999999999863
No 99
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.61 E-value=4.2e-14 Score=124.39 Aligned_cols=130 Identities=15% Similarity=0.103 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010976 156 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQAT 235 (496)
Q Consensus 156 ~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~ 235 (496)
+..++.+|.++...|+ +++|+..|++++.++|++..+++++|.++.. .|++++|+
T Consensus 13 ~~~~~~~a~~~~~~~~--------------~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~----~~~~~~A~------- 67 (166)
T 1a17_A 13 AEELKTQANDYFKAKD--------------YENAIKFYSQAIELNPSNAIYYGNRSLAYLR----TECYGYAL------- 67 (166)
T ss_dssp HHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH----TTCHHHHH-------
T ss_pred HHHHHHHHHHHHHccC--------------HHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----cCCHHHHH-------
Confidence 5778999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHH--HHHcchhHHhc
Q 010976 236 KNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTV--LYGLAEDTLRT 313 (496)
Q Consensus 236 ~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~--~~~~g~~~~a~ 313 (496)
..|++++.++|.++.+++++|.++..+|++ ++|+..|+++++++|++..++..++.+ +...|+
T Consensus 68 ~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~----- 132 (166)
T 1a17_A 68 GDATRAIELDKKYIKGYYRRAASNMALGKF----------RAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKA----- 132 (166)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHhccH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH-----
Confidence 899999999999999999999999999999 999999999999999999998666655 666676
Q ss_pred cCCCCCCCCCcHHHHHHHHHHHHHHH
Q 010976 314 GGTVNPREVSPNELYSQSAIYIAAAH 339 (496)
Q Consensus 314 ~~~~~~~~~~~~~~~~~A~~~~~~a~ 339 (496)
+.+|..++.++.
T Consensus 133 --------------~~~A~~~~~~~~ 144 (166)
T 1a17_A 133 --------------FERAIAGDEHKR 144 (166)
T ss_dssp --------------HHHHHHHHHHHH
T ss_pred --------------HHHHHHcccchH
Confidence 677777766543
No 100
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.61 E-value=3.3e-15 Score=145.89 Aligned_cols=200 Identities=16% Similarity=0.147 Sum_probs=148.9
Q ss_pred hhhhhcHHHHHHHHHHhhccc--------------hhhhHhhccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHH
Q 010976 108 HQLAEQNNAAMELINSVTGVD--------------EEGRSRQRILTFAAKRYANAIER------NPEDYDALYNWALVLQ 167 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~--------------~~~~~~~g~~~~Ai~~~~~al~~------~P~~~~a~~~lg~~~~ 167 (496)
+...|++++|+..+.+++... +..+...|++++|+..|++++.+ .|....++..+|.++.
T Consensus 15 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 94 (338)
T 3ro2_A 15 LCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLK 94 (338)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHH
Confidence 346788889999988887754 33456679999999999999988 4566789999999999
Q ss_pred HhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHcCC-------------HHHHH
Q 010976 168 ESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL------HDAFYNWAIAISDRAKMRGR-------------TKEAE 228 (496)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~------~~a~~~lg~~~~~~~~~~g~-------------~~eA~ 228 (496)
.+|+ +++|+..|++++.+.+.. ..+++++|.++.. .|+ ..++.
T Consensus 95 ~~g~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~a~ 156 (338)
T 3ro2_A 95 VLGN--------------FDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHA----KGKSFGCPGPQDTGEFPEDVR 156 (338)
T ss_dssp HTTC--------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----HHHTSSSSSCC----CCHHHH
T ss_pred HccC--------------HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH----cCcccccchhhhhhhhhhhHH
Confidence 9999 999999999999986643 4489999999999 999 44444
Q ss_pred HHHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHccCcchH------------------------------HHhh
Q 010976 229 ELWKQATKNYEKAVQL------NWNSPQALNNWGLALQELSAIVPA------------------------------REKQ 272 (496)
Q Consensus 229 ~~~~~A~~~~~~Al~l------~P~~~~a~~~lg~~l~~~g~~~~A------------------------------~~~~ 272 (496)
+.|++|+..|++++.+ .+....++.++|.++...|++++| ....
T Consensus 157 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~ 236 (338)
T 3ro2_A 157 NALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFL 236 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHc
Confidence 4444444555555543 344566888999999999998655 1145
Q ss_pred hhHHHHHHHHHHHHHhcCCC------HHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCc
Q 010976 273 TIVRTAISKFRAAIQLQFDF------HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 344 (496)
Q Consensus 273 ~~~~~Ai~~~~~Al~l~P~~------~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~ 344 (496)
|++++|+..|++++.+.+.. ..++.++|.++...|+ +..|..++++++.+.+.
T Consensus 237 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~a~~~~~~ 295 (338)
T 3ro2_A 237 GEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQD-------------------YEKAIDYHLKHLAIAQE 295 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcC-------------------HHHHHHHHHHHHHHHHh
Confidence 66677777777777665544 5666777777777776 67777777777766543
No 101
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.60 E-value=2.7e-15 Score=151.47 Aligned_cols=189 Identities=17% Similarity=0.179 Sum_probs=151.4
Q ss_pred hhhhhcHHHHHHHHHHhhccc--------------hhhhHhhccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHH
Q 010976 108 HQLAEQNNAAMELINSVTGVD--------------EEGRSRQRILTFAAKRYANAIER------NPEDYDALYNWALVLQ 167 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~--------------~~~~~~~g~~~~Ai~~~~~al~~------~P~~~~a~~~lg~~~~ 167 (496)
+...|++++|+..+.+++... +..+...|++++|+.+|++++.+ .|....++..+|.++.
T Consensus 19 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~ 98 (406)
T 3sf4_A 19 LCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLK 98 (406)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 456788899999988887764 23456679999999999999987 4556789999999999
Q ss_pred HhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHcCC-------------HHHHH
Q 010976 168 ESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL------HDAFYNWAIAISDRAKMRGR-------------TKEAE 228 (496)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~------~~a~~~lg~~~~~~~~~~g~-------------~~eA~ 228 (496)
.+|+ +++|+.+|++++.+.|.. ..+++++|.+|.. .|+ +.++.
T Consensus 99 ~~g~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~~~~~~~~~~~~~~a~ 160 (406)
T 3sf4_A 99 VLGN--------------FDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHA----KGKSFGCPGPQDVGEFPEEVR 160 (406)
T ss_dssp HTTC--------------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----HHHTCC-------CCCCHHHH
T ss_pred HcCC--------------HHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH----cCCcccccccchhhhhhhhHH
Confidence 9999 999999999999997653 5689999999999 999 44555
Q ss_pred HHHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHH------HH
Q 010976 229 ELWKQATKNYEKAVQL------NWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHR------AI 296 (496)
Q Consensus 229 ~~~~~A~~~~~~Al~l------~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~------a~ 296 (496)
..|++|+..|++++.+ .|....+++++|.++..+|++ ++|+..|++++++.+.... ++
T Consensus 161 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~ 230 (406)
T 3sf4_A 161 DALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNF----------RDAVIAHEQRLLIAKEFGDKAAERRAY 230 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBH----------HHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCH----------HHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 5555555666665554 345577899999999999999 9999999999998765543 89
Q ss_pred HHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCC
Q 010976 297 YNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKP 343 (496)
Q Consensus 297 ~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p 343 (496)
+++|.++...|+ +..|..+|.+++.+.+
T Consensus 231 ~~la~~~~~~g~-------------------~~~A~~~~~~al~~~~ 258 (406)
T 3sf4_A 231 SNLGNAYIFLGE-------------------FETASEYYKKTLLLAR 258 (406)
T ss_dssp HHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC-------------------hHHHHHHHHHHHHHHH
Confidence 999999999998 5666666666665544
No 102
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.60 E-value=3.2e-14 Score=140.08 Aligned_cols=208 Identities=9% Similarity=0.000 Sum_probs=166.0
Q ss_pred HHHHHHHHHhhccch----------hhhHhhc--cHHHHHHHHHHHHHhCCCCHHHHHHHHHHH----HHh---cCCCCC
Q 010976 115 NAAMELINSVTGVDE----------EGRSRQR--ILTFAAKRYANAIERNPEDYDALYNWALVL----QES---ADNVSL 175 (496)
Q Consensus 115 ~~A~~~~~~~l~~~~----------~~~~~~g--~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~----~~~---~~~~~~ 175 (496)
++|+.++.+++..++ ......+ ++++++..+.++|..+|++..+|+.++.++ ..+ ++
T Consensus 50 ~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~---- 125 (306)
T 3dra_A 50 ERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFD---- 125 (306)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCC----
T ss_pred HHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCC----
Confidence 567888888887772 2333456 999999999999999999999999999999 655 55
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHHHHHhcCCCCHHHHH
Q 010976 176 DSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTK--EAEELWKQATKNYEKAVQLNWNSPQALN 253 (496)
Q Consensus 176 ~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~--eA~~~~~~A~~~~~~Al~l~P~~~~a~~ 253 (496)
+++++++++++++.+|.+..+|++++.++.. .|+++ +++ +.+.++++.+|.|..+|+
T Consensus 126 ----------~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~----l~~~~~~~EL-------~~~~~~i~~d~~N~sAW~ 184 (306)
T 3dra_A 126 ----------PYREFDILEAMLSSDPKNHHVWSYRKWLVDT----FDLHNDAKEL-------SFVDKVIDTDLKNNSAWS 184 (306)
T ss_dssp ----------THHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCTTCHHHH-------HHHHHHHHHCTTCHHHHH
T ss_pred ----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hcccChHHHH-------HHHHHHHHhCCCCHHHHH
Confidence 9999999999999999999999999999999 99887 777 899999999999999999
Q ss_pred HHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCC------CC-CCCCCcH-
Q 010976 254 NWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGT------VN-PREVSPN- 325 (496)
Q Consensus 254 ~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~------~~-~~~~~~~- 325 (496)
+++.++..+++. .....++++++++.++|.++|+|..+|++++.++...|+........ +. ....++-
T Consensus 185 ~R~~ll~~l~~~----~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a 260 (306)
T 3dra_A 185 HRFFLLFSKKHL----ATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTSSFA 260 (306)
T ss_dssp HHHHHHHSSGGG----CCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESCHHH
T ss_pred HHHHHHHhcccc----chhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCCHHH
Confidence 999999998871 01112399999999999999999999999999999988743222100 00 0001111
Q ss_pred -----H------HHHHHHHHHHHHHh-cCCcHHHHHHH
Q 010976 326 -----E------LYSQSAIYIAAAHA-LKPSYSVYSSA 351 (496)
Q Consensus 326 -----~------~~~~A~~~~~~a~~-l~p~~~~y~~a 351 (496)
+ .+.+|..+|+.+.. +||-+..|..-
T Consensus 261 l~~la~~~~~~~~~~~A~~~~~~l~~~~Dpir~~yW~~ 298 (306)
T 3dra_A 261 LETLAKIYTQQKKYNESRTVYDLLKSKYNPIRSNFWDY 298 (306)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTCGGGHHHHHH
T ss_pred HHHHHHHHHccCCHHHHHHHHHHHHhccChHHHHHHHH
Confidence 0 23568888888886 89988866653
No 103
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.60 E-value=8.8e-15 Score=128.70 Aligned_cols=114 Identities=24% Similarity=0.285 Sum_probs=94.0
Q ss_pred HhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 010976 133 SRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAI 212 (496)
Q Consensus 133 ~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 212 (496)
.+.+.|++|+..|+++++++|+++++|+++|.++..+++... -....+.+++|+..|++||+++|++..+|+++|.
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~----g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ 88 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHS----ISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGN 88 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSC----HHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccch----hhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHH
Confidence 456889999999999999999999999999999999987000 0001223569999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHH
Q 010976 213 AISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQ 250 (496)
Q Consensus 213 ~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~ 250 (496)
+|..+-+...++.++.+.|++|+.+|++|++++|++..
T Consensus 89 ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~ 126 (158)
T 1zu2_A 89 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTH 126 (158)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHH
Confidence 99982222336788888899999999999999998753
No 104
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.60 E-value=1.8e-14 Score=132.82 Aligned_cols=133 Identities=11% Similarity=0.104 Sum_probs=119.8
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 210 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~l 210 (496)
.+...|++++|+..|++++ +| ++.+++++|.+|..+|+ +++|+..|++++.++|++..+++++
T Consensus 15 ~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~al~~~~~~~~~~~~l 77 (213)
T 1hh8_A 15 LAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKN--------------MTEAEKAFTRSINRDKHLAVAYFQR 77 (213)
T ss_dssp HHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCccchHHHHHH
Confidence 3556899999999999995 44 78999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH----------------HHHHHHHHHHHHccCcchHHHhhhh
Q 010976 211 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP----------------QALNNWGLALQELSAIVPAREKQTI 274 (496)
Q Consensus 211 g~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~----------------~a~~~lg~~l~~~g~~~~A~~~~~~ 274 (496)
|.+|.. +|++++|+ ..|++++++.|.+. .+++++|.++..+|++
T Consensus 78 g~~~~~----~~~~~~A~-------~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~--------- 137 (213)
T 1hh8_A 78 GMLYYQ----TEKYDLAI-------KDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEW--------- 137 (213)
T ss_dssp HHHHHH----TTCHHHHH-------HHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCH---------
T ss_pred HHHHHH----cccHHHHH-------HHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCH---------
Confidence 999999 99999999 78888888888766 9999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 010976 275 VRTAISKFRAAIQLQFDFHRAIYNLGT 301 (496)
Q Consensus 275 ~~~Ai~~~~~Al~l~P~~~~a~~~lg~ 301 (496)
++|+..|+++++++|++.......+.
T Consensus 138 -~~A~~~~~~al~~~p~~~~~~~~~a~ 163 (213)
T 1hh8_A 138 -KKAEEQLALATSMKSEPRHSKIDKAM 163 (213)
T ss_dssp -HHHHHHHHHHHTTCCSGGGGHHHHHH
T ss_pred -HHHHHHHHHHHHcCcccccchHHHHH
Confidence 99999999999999987544444433
No 105
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.60 E-value=1.6e-14 Score=123.32 Aligned_cols=111 Identities=21% Similarity=0.210 Sum_probs=96.1
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 010976 154 EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQ 233 (496)
Q Consensus 154 ~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~ 233 (496)
+.+.++.++|.+++..|+ |++|+.+|++|++++|+++.+|+++|.+|.. +|++++|+
T Consensus 6 d~A~a~~~lG~~~~~~~~--------------~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~----~~~~~~A~----- 62 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKD--------------FEKAHVHYDKAIELDPSNITFYNNKAAVYFE----EKKFAECV----- 62 (127)
T ss_dssp HHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-----
T ss_pred HHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCCHHHHHhHHHHHHH----hhhHHHHH-----
Confidence 346788999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHhcCCCC-------HHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 010976 234 ATKNYEKAVQLNWNS-------PQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLG 300 (496)
Q Consensus 234 A~~~~~~Al~l~P~~-------~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg 300 (496)
..|+++++++|++ ..+++++|.++..+|++ ++|+..|+++++..|+ +.....|.
T Consensus 63 --~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~----------~~A~~~~~kal~~~~~-~~~~~~l~ 123 (127)
T 4gcn_A 63 --QFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDL----------SLAVQWFHRSLSEFRD-PELVKKVK 123 (127)
T ss_dssp --HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred --HHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhhCcC-HHHHHHHH
Confidence 6777777777665 35788888888888888 9999999999999886 55444443
No 106
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.60 E-value=8.7e-15 Score=144.28 Aligned_cols=182 Identities=13% Similarity=0.114 Sum_probs=148.6
Q ss_pred hhcHHHHHHHHHHhhccchhhhHhhccHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHhcCCCCCCCCCcchhh
Q 010976 111 AEQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPED------YDALYNWALVLQESADNVSLDSTSPSKDA 184 (496)
Q Consensus 111 ~~~~~~A~~~~~~~l~~~~~~~~~~g~~~~Ai~~~~~al~~~P~~------~~a~~~lg~~~~~~~~~~~~~~~~~~~~~ 184 (496)
.++++.|...|.++. ..+..+|++++|+.+|.+++.+.+.. ..++.++|.+|..+|+
T Consensus 29 ~~~~~~A~~~~~~a~----~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~------------- 91 (307)
T 2ifu_A 29 KPDYDSAASEYAKAA----VAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQR------------- 91 (307)
T ss_dssp SCCHHHHHHHHHHHH----HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-------------
T ss_pred CCCHHHHHHHHHHHH----HHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC-------------
Confidence 478999999998874 33566899999999999999987543 5689999999999999
Q ss_pred hHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 010976 185 LLEEACKKYDEATRLCPT------LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA 258 (496)
Q Consensus 185 ~~~~A~~~~~~Al~l~P~------~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~ 258 (496)
+++|+.+|++++++.+. ...++.++|.+|. .|++++|++.|++|+..+... ........+++++|.+
T Consensus 92 -~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-----~g~~~~A~~~~~~Al~~~~~~-~~~~~~~~~~~~lg~~ 164 (307)
T 2ifu_A 92 -MPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLME-----PLDLSKAVHLYQQAAAVFENE-ERLRQAAELIGKASRL 164 (307)
T ss_dssp -GGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT-----TTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHHHHhC-CChhHHHHHHHHHHHH
Confidence 99999999999999543 2467889998883 499999996666666655431 0000126789999999
Q ss_pred HHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCC------HHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHH
Q 010976 259 LQELSAIVPAREKQTIVRTAISKFRAAIQLQFDF------HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSA 332 (496)
Q Consensus 259 l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~------~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~ 332 (496)
|..+|++ ++|+.+|++++++.|++ ..++.++|.++..+|+ +..|.
T Consensus 165 ~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~-------------------~~~A~ 215 (307)
T 2ifu_A 165 LVRQQKF----------DEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRAD-------------------YVAAQ 215 (307)
T ss_dssp HHHTTCH----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-------------------HHHHH
T ss_pred HHHcCCH----------HHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCC-------------------HHHHH
Confidence 9999999 99999999999987654 3578899999999998 89999
Q ss_pred HHHHHHHhcCCcHH
Q 010976 333 IYIAAAHALKPSYS 346 (496)
Q Consensus 333 ~~~~~a~~l~p~~~ 346 (496)
.+|++++ ++|.+.
T Consensus 216 ~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 216 KCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHT-TSTTST
T ss_pred HHHHHHh-CCCCCC
Confidence 9999999 999765
No 107
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.60 E-value=6.2e-15 Score=149.35 Aligned_cols=167 Identities=17% Similarity=0.103 Sum_probs=141.4
Q ss_pred hhhhHhhccHHHHHHHHHHHHHh---CC---CCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 010976 129 EEGRSRQRILTFAAKRYANAIER---NP---EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT 202 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~~---~P---~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~ 202 (496)
+..+...|++++|+..|++++++ .+ ..+.+++++|.+|..+|+ +++|+.+|++|+++.+.
T Consensus 110 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~--------------~~~A~~~~~~al~~~~~ 175 (383)
T 3ulq_A 110 GMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQ--------------TYFSMDYARQAYEIYKE 175 (383)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHHHh
Confidence 34466789999999999999997 23 356899999999999999 99999999999999443
Q ss_pred -------CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhH
Q 010976 203 -------LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIV 275 (496)
Q Consensus 203 -------~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~ 275 (496)
...+++++|.+|.. +|++++|++.|++|+..+.+. ...+....+++++|.+|..+|++
T Consensus 176 ~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~lg~~y~~~g~~---------- 240 (383)
T 3ulq_A 176 HEAYNIRLLQCHSLFATNFLD----LKQYEDAISHFQKAYSMAEAE-KQPQLMGRTLYNIGLCKNSQSQY---------- 240 (383)
T ss_dssp CSTTHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCH----------
T ss_pred CccchHHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHCCCH----------
Confidence 35689999999999 999999997776666665543 11222346899999999999999
Q ss_pred HHHHHHHHHHHH-----hc-CCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCC
Q 010976 276 RTAISKFRAAIQ-----LQ-FDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKP 343 (496)
Q Consensus 276 ~~Ai~~~~~Al~-----l~-P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p 343 (496)
++|+.+|++|++ .+ |....+++++|.++..+|+ +..|..++++++.+.+
T Consensus 241 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~-------------------~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 241 EDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGK-------------------IDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCC-------------------HHHHHHHHHHHHHHHH
Confidence 999999999999 46 8889999999999999999 8899999999988744
No 108
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.60 E-value=2.7e-15 Score=137.71 Aligned_cols=142 Identities=15% Similarity=0.083 Sum_probs=127.1
Q ss_pred HhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCH--------
Q 010976 133 SRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLH-------- 204 (496)
Q Consensus 133 ~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~-------- 204 (496)
...|++++|.+.|.......+.....+..+|.+++..|+ |++|+..|++++.+.|+++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~ 80 (198)
T 2fbn_A 15 ENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNE--------------INEAIVKYKEALDFFIHTEEWDDQILL 80 (198)
T ss_dssp -------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHTTTTCTTCCCHHHH
T ss_pred hhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHHhcccccchhhHH
Confidence 345777778888877777777788899999999999999 9999999999999999987
Q ss_pred --------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHH
Q 010976 205 --------DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVR 276 (496)
Q Consensus 205 --------~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~ 276 (496)
.+++++|.++.. +|++++|+ .+|+++++++|++..+++++|.+|..+|++ +
T Consensus 81 ~~~~~~~~~~~~~la~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~lg~~~~~~~~~----------~ 139 (198)
T 2fbn_A 81 DKKKNIEISCNLNLATCYNK----NKDYPKAI-------DHASKVLKIDKNNVKALYKLGVANMYFGFL----------E 139 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHHTCH----------H
T ss_pred HHHHHHHHHHHHHHHHHHHH----hcCHHHHH-------HHHHHHHHhCcccHHHHHHHHHHHHHcccH----------H
Confidence 899999999999 99999999 899999999999999999999999999999 9
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchh
Q 010976 277 TAISKFRAAIQLQFDFHRAIYNLGTVLYGLAED 309 (496)
Q Consensus 277 ~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~ 309 (496)
+|+..|+++++++|++..++.+++.++..+++.
T Consensus 140 ~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 172 (198)
T 2fbn_A 140 EAKENLYKAASLNPNNLDIRNSYELCVNKLKEA 172 (198)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998873
No 109
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.59 E-value=6e-14 Score=116.54 Aligned_cols=122 Identities=29% Similarity=0.365 Sum_probs=112.9
Q ss_pred hCCCC-HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Q 010976 151 RNPED-YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEE 229 (496)
Q Consensus 151 ~~P~~-~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~ 229 (496)
.+|.. ..+++.+|.++...|+ +++|++.|++++..+|++..+++.+|.++.. .|++++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~- 63 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYYKQGD--------------YDEAIEYYQKALELDPNNAEAWYNLGNAYYK----QGDYDEAI- 63 (125)
T ss_dssp ----CHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-
T ss_pred CCccccHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH----hCCHHHHH-
Confidence 35655 7899999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcc
Q 010976 230 LWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLA 307 (496)
Q Consensus 230 ~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g 307 (496)
..|++++..+|.+..+++++|.++...|++ ++|+..|+++++++|++..++.++|.++...|
T Consensus 64 ------~~~~~~~~~~~~~~~~~~~la~~~~~~~~~----------~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 64 ------EYYQKALELDPNNAEAWYNLGNAYYKQGDY----------DEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp ------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred ------HHHHHHHHhCCccHHHHHHHHHHHHHhcCH----------HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 788888999999999999999999999999 99999999999999999999999999987654
No 110
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.59 E-value=2.9e-14 Score=121.79 Aligned_cols=124 Identities=17% Similarity=0.085 Sum_probs=113.4
Q ss_pred HhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Q 010976 150 ERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEE 229 (496)
Q Consensus 150 ~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~ 229 (496)
..+|.++..++.+|.+++..|+ +++|+..|++++.++|++..+++++|.++.. +|++++|+
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~--------------~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~----~~~~~~A~- 63 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRK--------------YPEAAACYGRAITRNPLVAVYYTNRALCYLK----MQQPEQAL- 63 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-
T ss_pred CCccccHHHHHHHHHHHHHhCc--------------HHHHHHHHHHHHhhCcCcHHHHHHHHHHHHH----hcCHHHHH-
Confidence 4578899999999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCC-----CHHHHHHHHHHHH
Q 010976 230 LWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFD-----FHRAIYNLGTVLY 304 (496)
Q Consensus 230 ~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~-----~~~a~~~lg~~~~ 304 (496)
..|+++++++|+++.+++++|.++..+|++ ++|+..|+++++++|+ +..+...+..+..
T Consensus 64 ------~~~~~al~~~p~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~ 127 (137)
T 3q49_B 64 ------ADCRRALELDGQSVKAHFFLGQCQLEMESY----------DEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKK 127 (137)
T ss_dssp ------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHH
T ss_pred ------HHHHHHHHhCchhHHHHHHHHHHHHHHhhH----------HHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999 9999999999999998 7777777777765
Q ss_pred Hcch
Q 010976 305 GLAE 308 (496)
Q Consensus 305 ~~g~ 308 (496)
....
T Consensus 128 ~~~~ 131 (137)
T 3q49_B 128 KRWN 131 (137)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 111
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.59 E-value=1.1e-14 Score=147.60 Aligned_cols=174 Identities=13% Similarity=0.082 Sum_probs=142.0
Q ss_pred CChhhhhhcHHHHHHHHHHhhccc----------------hhhhHhhccHHHHHHHHHHHHHhCCC-------CHHHHHH
Q 010976 105 NTPHQLAEQNNAAMELINSVTGVD----------------EEGRSRQRILTFAAKRYANAIERNPE-------DYDALYN 161 (496)
Q Consensus 105 ~~~~~~~~~~~~A~~~~~~~l~~~----------------~~~~~~~g~~~~Ai~~~~~al~~~P~-------~~~a~~~ 161 (496)
+..+...|+++.|+..+.+++... +..+...|++++|+.+|++++++.+. ...++.+
T Consensus 110 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 189 (383)
T 3ulq_A 110 GMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSL 189 (383)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 334456799999999999998762 34566789999999999999998543 3568999
Q ss_pred HHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010976 162 WALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL------HDAFYNWAIAISDRAKMRGRTKEAEELWKQAT 235 (496)
Q Consensus 162 lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~------~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~ 235 (496)
+|.+|..+|+ +++|+.+|++++.+.+.. ..+++++|.+|.. +|++++|+..|++|+
T Consensus 190 lg~~~~~~g~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~----~g~~~~A~~~~~~al 251 (383)
T 3ulq_A 190 FATNFLDLKQ--------------YEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNS----QSQYEDAIPYFKRAI 251 (383)
T ss_dssp HHHHHHHTTC--------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHH
T ss_pred HHHHHHHhcC--------------HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHH
Confidence 9999999999 999999999999985543 3589999999999 999999996665555
Q ss_pred HHHHHHHhcC-CCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhc-----CCCHHHHHHHHHHHHHcch
Q 010976 236 KNYEKAVQLN-WNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ-----FDFHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 236 ~~~~~Al~l~-P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~-----P~~~~a~~~lg~~~~~~g~ 308 (496)
..+++. .+ |....+++++|.++..+|++ ++|+.+|++++++. |.....+.++|.++...|+
T Consensus 252 ~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~~~ 318 (383)
T 3ulq_A 252 AVFEES--NILPSLPQAYFLITQIHYKLGKI----------DKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPD 318 (383)
T ss_dssp HHHHHT--TCGGGHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTSSCC
T ss_pred HHHHhh--ccchhHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCc
Confidence 554432 34 77899999999999999999 99999999999883 4444446778888888875
No 112
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.59 E-value=1.7e-14 Score=139.97 Aligned_cols=168 Identities=20% Similarity=0.237 Sum_probs=147.3
Q ss_pred hhhHhhccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh--
Q 010976 130 EGRSRQRILTFAAKRYANAIER--------NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL-- 199 (496)
Q Consensus 130 ~~~~~~g~~~~Ai~~~~~al~~--------~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l-- 199 (496)
..+...|++++|+.+|++++++ +|....++..+|.+|...|+ +++|+.+|++++.+
T Consensus 35 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~--------------~~~A~~~~~~al~~~~ 100 (311)
T 3nf1_A 35 IQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNK--------------YKDAANLLNDALAIRE 100 (311)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHHHHH
Confidence 3466789999999999999995 67788999999999999999 99999999999998
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHccCcchHHHhh
Q 010976 200 ------CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL-NWNSPQALNNWGLALQELSAIVPAREKQ 272 (496)
Q Consensus 200 ------~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l-~P~~~~a~~~lg~~l~~~g~~~~A~~~~ 272 (496)
+|....+++++|.++.. .|++++|+..|++++..+++.... +|....+++++|.++...|++
T Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~------- 169 (311)
T 3nf1_A 101 KTLGKDHPAVAATLNNLAVLYGK----RGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKY------- 169 (311)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCH-------
T ss_pred HHhCCCChHHHHHHHHHHHHHHH----cCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCH-------
Confidence 46677899999999999 999999998777777776655332 355778999999999999999
Q ss_pred hhHHHHHHHHHHHHHh--------cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCc
Q 010976 273 TIVRTAISKFRAAIQL--------QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 344 (496)
Q Consensus 273 ~~~~~Ai~~~~~Al~l--------~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~ 344 (496)
++|+..|++++++ +|....+++++|.++..+|+ +.+|..+|++++++.+.
T Consensus 170 ---~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 170 ---EEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGK-------------------FKQAETLYKEILTRAHE 227 (311)
T ss_dssp ---HHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHHHHH
Confidence 9999999999998 77778899999999999999 88999999999876443
No 113
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.58 E-value=9e-15 Score=131.73 Aligned_cols=139 Identities=7% Similarity=-0.055 Sum_probs=122.6
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 010976 152 NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELW 231 (496)
Q Consensus 152 ~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~ 231 (496)
||...+.++.+|.++...|+ +++|+..|+++++++|++..+++++|.++.. .|++++|+
T Consensus 2 ~~~~~~~~~~~a~~~~~~g~--------------~~~A~~~~~~al~~~P~~~~a~~~la~~~~~----~g~~~~A~--- 60 (176)
T 2r5s_A 2 NASPDEQLLKQVSELLQQGE--------------HAQALNVIQTLSDELQSRGDVKLAKADCLLE----TKQFELAQ--- 60 (176)
T ss_dssp ----CTTHHHHHHHHHHTTC--------------HHHHHHHHHTSCHHHHTSHHHHHHHHHHHHH----TTCHHHHH---
T ss_pred CCCHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH----CCCHHHHH---
Confidence 45555678899999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhH
Q 010976 232 KQATKNYEKAVQLNWNSPQALNNWGLALQ-ELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDT 310 (496)
Q Consensus 232 ~~A~~~~~~Al~l~P~~~~a~~~lg~~l~-~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~ 310 (496)
..|++++..+| ++..+..++.+.. ..+.. .+|+..|+++++++|+++.+++++|.++...|+
T Consensus 61 ----~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~----------~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~-- 123 (176)
T 2r5s_A 61 ----ELLATIPLEYQ-DNSYKSLIAKLELHQQAAE----------SPELKRLEQELAANPDNFELACELAVQYNQVGR-- 123 (176)
T ss_dssp ----HHHTTCCGGGC-CHHHHHHHHHHHHHHHHTS----------CHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC--
T ss_pred ----HHHHHhhhccC-ChHHHHHHHHHHHHhhccc----------chHHHHHHHHHHhCCCCHHHHHHHHHHHHHccc--
Confidence 89999999999 8887777765533 33444 568999999999999999999999999999999
Q ss_pred HhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcH
Q 010976 311 LRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 345 (496)
Q Consensus 311 ~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~ 345 (496)
+.+|..+|+++++++|+.
T Consensus 124 -----------------~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 124 -----------------DEEALELLWNILKVNLGA 141 (176)
T ss_dssp -----------------HHHHHHHHHHHHTTCTTT
T ss_pred -----------------HHHHHHHHHHHHHhCccc
Confidence 899999999999999875
No 114
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.58 E-value=3e-13 Score=134.08 Aligned_cols=184 Identities=11% Similarity=0.035 Sum_probs=152.7
Q ss_pred hccHH-HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010976 135 QRILT-FAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIA 213 (496)
Q Consensus 135 ~g~~~-~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~ 213 (496)
.|+++ +|+.++.++|.++|++..+|+.++.++..++.... .......+++++.+++.++..+|.+..+|+.++.+
T Consensus 42 ~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~----~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wl 117 (331)
T 3dss_A 42 AGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKS----PEESAALVKAELGFLESCLRVNPKSYGTWHHRCWL 117 (331)
T ss_dssp TTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSC----HHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhccccc----chhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 34444 79999999999999999999999999988775100 00122347899999999999999999999999999
Q ss_pred HHHHHHHcCC--HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccC-cchHHHhhhhHHHHHHHHHHHHHhcC
Q 010976 214 ISDRAKMRGR--TKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSA-IVPAREKQTIVRTAISKFRAAIQLQF 290 (496)
Q Consensus 214 ~~~~~~~~g~--~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~-~~~A~~~~~~~~~Ai~~~~~Al~l~P 290 (496)
+.. +++ +++++ .++.++++++|.|..+|++.+.++...|. + +++++++.++++.+|
T Consensus 118 L~~----l~~~~~~~EL-------~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~----------~eel~~~~~~I~~~p 176 (331)
T 3dss_A 118 LSR----LPEPNWAREL-------ELCARFLEADERNFHCWDYRRFVAAQAAVAP----------AEELAFTDSLITRNF 176 (331)
T ss_dssp HHH----CSSCCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCCH----------HHHHHHHHHHHHHCS
T ss_pred Hhc----cCcccHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHhCcCH----------HHHHHHHHHHHHHCC
Confidence 998 884 67777 89999999999999999999999999998 5 899999999999999
Q ss_pred CCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHH
Q 010976 291 DFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVY 348 (496)
Q Consensus 291 ~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y 348 (496)
.|..+|++++.++..+...... .+....+...+.++..++.+++.++|++...
T Consensus 177 ~N~SAW~~R~~ll~~l~~~~~~-----~~~~~~~~~~~~eEle~~~~ai~~~P~d~Sa 229 (331)
T 3dss_A 177 SNYSSWHYRSCLLPQLHPQPDS-----GPQGRLPENVLLKELELVQNAFFTDPNDQSA 229 (331)
T ss_dssp CCHHHHHHHHHHHHHHSCCC-----------CCCHHHHHHHHHHHHHHHHHSTTCHHH
T ss_pred CCHHHHHHHHHHHHHhhhcccc-----ccccccchHHHHHHHHHHHHHHHhCCCCHHH
Confidence 9999999999999888541100 0011123457999999999999999999943
No 115
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.58 E-value=1.3e-14 Score=146.48 Aligned_cols=189 Identities=13% Similarity=0.090 Sum_probs=152.8
Q ss_pred hhhhhhcHHHHHHHHHHhhccc----------------hhhhHhhcc--------------------HHHHHHHHHHHHH
Q 010976 107 PHQLAEQNNAAMELINSVTGVD----------------EEGRSRQRI--------------------LTFAAKRYANAIE 150 (496)
Q Consensus 107 ~~~~~~~~~~A~~~~~~~l~~~----------------~~~~~~~g~--------------------~~~Ai~~~~~al~ 150 (496)
.+...|+++.|+..+.+++... +..+...|+ +++|+..|++++.
T Consensus 96 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~ 175 (406)
T 3sf4_A 96 TLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLS 175 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 4456788999998888877654 234556788 9999999999998
Q ss_pred h------CCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHH
Q 010976 151 R------NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLH------DAFYNWAIAISDRA 218 (496)
Q Consensus 151 ~------~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~------~a~~~lg~~~~~~~ 218 (496)
+ .|....++.++|.+|..+|+ +++|+.+|++++++.+... .+++++|.+|..
T Consensus 176 ~~~~~~~~~~~~~~~~~la~~~~~~g~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-- 239 (406)
T 3sf4_A 176 LVTALGDRAAQGRAFGNLGNTHYLLGN--------------FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIF-- 239 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTB--------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--
T ss_pred HHHhccCcHHHHHHHHHHHHHHHHccC--------------HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH--
Confidence 7 34556789999999999999 9999999999999966543 389999999999
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCC------
Q 010976 219 KMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDF------ 292 (496)
Q Consensus 219 ~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~------ 292 (496)
+|++++|+..|++|+..+... ...+....+++++|.++...|++ ++|+..|++++++.+..
T Consensus 240 --~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~a~~~~~~~~~~~~~ 306 (406)
T 3sf4_A 240 --LGEFETASEYYKKTLLLARQL-KDRAVEAQSCYSLGNTYTLLQDY----------EKAIDYHLKHLAIAQELNDRIGE 306 (406)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHTTCHHHH
T ss_pred --cCChHHHHHHHHHHHHHHHhC-cCchHHHHHHHHHHHHHHHhCcH----------HHHHHHHHHHHHHHHhcCCcHHH
Confidence 999999995555554444321 00011277899999999999999 99999999999986554
Q ss_pred HHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCC
Q 010976 293 HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKP 343 (496)
Q Consensus 293 ~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p 343 (496)
..++.++|.+|..+|+ +..|..+|++++++.+
T Consensus 307 ~~~~~~la~~~~~~g~-------------------~~~A~~~~~~al~~~~ 338 (406)
T 3sf4_A 307 GRACWSLGNAYTALGN-------------------HDQAMHFAEKHLEISR 338 (406)
T ss_dssp HHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHHHH
Confidence 7799999999999999 8899999999888744
No 116
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.57 E-value=2.1e-14 Score=140.27 Aligned_cols=164 Identities=15% Similarity=0.048 Sum_probs=135.9
Q ss_pred hHhhccHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC--
Q 010976 132 RSRQRILTFAAKRYANAIERNPEDYD------ALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL-- 203 (496)
Q Consensus 132 ~~~~g~~~~Ai~~~~~al~~~P~~~~------a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~-- 203 (496)
+...|++++|+..|++++...+..+. .+..+|.++...++ +++|+.+|++++.+.+..
T Consensus 85 ~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~Ai~~~~~al~~~~~~~~ 150 (293)
T 3u3w_A 85 LCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVD--------------YEYCILELKKLLNQQLTGID 150 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSC--------------HHHHHHHHHHHHHTCCCCSC
T ss_pred HHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccC--------------HHHHHHHHHHHHHHhccccc
Confidence 45679999999999999998887765 33458888888888 999999999999975442
Q ss_pred ----HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHH
Q 010976 204 ----HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAI 279 (496)
Q Consensus 204 ----~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai 279 (496)
..+++++|.+|.. +|++++|+..|++|+..+++.-...+....+++|+|.+|..+|++ ++|+
T Consensus 151 ~~~~~~~~~~lg~~y~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y----------~~A~ 216 (293)
T 3u3w_A 151 VYQNLYIENAIANIYAE----NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRY----------EESL 216 (293)
T ss_dssp TTHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCH----------HHHH
T ss_pred HHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHH----------HHHH
Confidence 3479999999999 999999998888888776553233344567899999999999999 9999
Q ss_pred HHHHHHHHhcCCC------HHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhc
Q 010976 280 SKFRAAIQLQFDF------HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHAL 341 (496)
Q Consensus 280 ~~~~~Al~l~P~~------~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l 341 (496)
.+|++++++.+.. +.+++++|.+|..+|+. +.+|..+|++|+.+
T Consensus 217 ~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~------------------~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 217 YQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYE------------------EAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCC------------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCc------------------HHHHHHHHHHHHHH
Confidence 9999999986544 78999999999999941 57888888887764
No 117
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.57 E-value=2.4e-14 Score=126.83 Aligned_cols=119 Identities=17% Similarity=0.060 Sum_probs=111.2
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHH
Q 010976 155 DYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL------------------CPTLHDAFYNWAIAISD 216 (496)
Q Consensus 155 ~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l------------------~P~~~~a~~~lg~~~~~ 216 (496)
.+..+..+|..++..|+ |++|+..|++++.+ +|.+..+|+++|.+|..
T Consensus 10 ~a~~~~~~G~~~~~~~~--------------~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~ 75 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKD--------------YKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN 75 (162)
T ss_dssp HHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35778999999999999 99999999999999 77788999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCH-HH
Q 010976 217 RAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH-RA 295 (496)
Q Consensus 217 ~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~-~a 295 (496)
+|++++|+ ..|+++++++|+++.+|+++|.+|..+|++ ++|+..|+++++++|++. .+
T Consensus 76 ----~~~~~~A~-------~~~~~al~~~p~~~~a~~~~g~~~~~~g~~----------~~A~~~~~~al~l~p~~~~~~ 134 (162)
T 3rkv_A 76 ----IGDLHEAE-------ETSSEVLKREETNEKALFRRAKARIAAWKL----------DEAEEDLKLLLRNHPAAASVV 134 (162)
T ss_dssp ----HTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCGGGHHHH
T ss_pred ----cCcHHHHH-------HHHHHHHhcCCcchHHHHHHHHHHHHHhcH----------HHHHHHHHHHHhcCCCCHHHH
Confidence 99999999 899999999999999999999999999999 999999999999999999 77
Q ss_pred HHHHHHHHHHcch
Q 010976 296 IYNLGTVLYGLAE 308 (496)
Q Consensus 296 ~~~lg~~~~~~g~ 308 (496)
...++.+...+.+
T Consensus 135 ~~~l~~~~~~~~~ 147 (162)
T 3rkv_A 135 AREMKIVTERRAE 147 (162)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888877665
No 118
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.57 E-value=6.8e-14 Score=131.26 Aligned_cols=165 Identities=13% Similarity=0.038 Sum_probs=134.5
Q ss_pred hhhhhcHHHHHHHHHHhhccc-------------hhhhHhhccHHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHHhcC
Q 010976 108 HQLAEQNNAAMELINSVTGVD-------------EEGRSRQRILTFAAKRYANAIERNPEDYD---ALYNWALVLQESAD 171 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~-------------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~---a~~~lg~~~~~~~~ 171 (496)
+...|+++.|+..+.+++... +.++..+|++++|+..|+++++.+|++.. +++.+|.++..++.
T Consensus 14 ~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~ 93 (225)
T 2yhc_A 14 KLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDD 93 (225)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhh
Confidence 456789999999999988643 34567789999999999999999999864 89999999988653
Q ss_pred CCC----CCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHHHHHcCCHHHHHHH
Q 010976 172 NVS----LDSTSPSKDALLEEACKKYDEATRLCPTLHDAF-----------------YNWAIAISDRAKMRGRTKEAEEL 230 (496)
Q Consensus 172 ~~~----~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~-----------------~~lg~~~~~~~~~~g~~~eA~~~ 230 (496)
..- .........|++++|+..|+++++.+|++..++ +.+|.+|.. .|++.+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~----~~~~~~A~-- 167 (225)
T 2yhc_A 94 SALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTE----RGAWVAVV-- 167 (225)
T ss_dssp --------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HTCHHHHH--
T ss_pred hhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCcHHHHH--
Confidence 100 001112235679999999999999999987554 567888888 99999999
Q ss_pred HHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCH
Q 010976 231 WKQATKNYEKAVQLNWNSP---QALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH 293 (496)
Q Consensus 231 ~~~A~~~~~~Al~l~P~~~---~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~ 293 (496)
..|+++++..|+++ .+++.+|.++.++|++ ++|+..|++++...|++.
T Consensus 168 -----~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~----------~~A~~~~~~l~~~~~~~~ 218 (225)
T 2yhc_A 168 -----NRVEGMLRDYPDTQATRDALPLMENAYRQMQMN----------AQAEKVAKIIAANSSNTL 218 (225)
T ss_dssp -----HHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHCCSCCC
T ss_pred -----HHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCc----------HHHHHHHHHHHhhCCCch
Confidence 89999999999986 7899999999999999 999999999999888753
No 119
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.57 E-value=4.3e-14 Score=119.48 Aligned_cols=115 Identities=17% Similarity=0.120 Sum_probs=106.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHH
Q 010976 201 PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAIS 280 (496)
Q Consensus 201 P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~ 280 (496)
|..+..++++|..+.. .|++++|+ ..|+++++++|+++.+++++|.++..+|++ ++|+.
T Consensus 1 p~~a~~~~~~g~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~~a~~~~~~~~~----------~~A~~ 59 (126)
T 3upv_A 1 SMKAEEARLEGKEYFT----KSDWPNAV-------KAYTEMIKRAPEDARGYSNRAAALAKLMSF----------PEAIA 59 (126)
T ss_dssp CHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHH
T ss_pred CchHHHHHHHHHHHHH----hcCHHHHH-------HHHHHHHHhCCCChHHHHHHHHHHHHhcCH----------HHHHH
Confidence 4457889999999999 99999999 899999999999999999999999999999 99999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcC------CcHHHHHHHHHh
Q 010976 281 KFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALK------PSYSVYSSALRL 354 (496)
Q Consensus 281 ~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~------p~~~~y~~al~~ 354 (496)
.|+++++++|+++.+++++|.++..+|+ +..|..+|+++++++ |.+......+..
T Consensus 60 ~~~~al~~~p~~~~~~~~lg~~~~~~~~-------------------~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~ 120 (126)
T 3upv_A 60 DCNKAIEKDPNFVRAYIRKATAQIAVKE-------------------YASALETLDAARTKDAEVNNGSSAREIDQLYYK 120 (126)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHHhC-------------------HHHHHHHHHHHHHhCcccCCchhHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999 888876666654
Q ss_pred h
Q 010976 355 V 355 (496)
Q Consensus 355 ~ 355 (496)
+
T Consensus 121 ~ 121 (126)
T 3upv_A 121 A 121 (126)
T ss_dssp H
T ss_pred H
Confidence 4
No 120
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.56 E-value=2.5e-14 Score=121.05 Aligned_cols=102 Identities=14% Similarity=0.142 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 010976 158 ALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKN 237 (496)
Q Consensus 158 a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~ 237 (496)
.++.+|.++...|+ +++|+..|+++++++|+++.+|+++|.++.. +|++++|+ ..
T Consensus 19 ~~~~~g~~~~~~g~--------------~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~----~g~~~~A~-------~~ 73 (121)
T 1hxi_A 19 NPMEEGLSMLKLAN--------------LAEAALAFEAVCQKEPEREEAWRSLGLTQAE----NEKDGLAI-------IA 73 (121)
T ss_dssp CHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH----TTCHHHHH-------HH
T ss_pred hHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----cCCHHHHH-------HH
Confidence 47889999999999 9999999999999999999999999999999 99999999 89
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHH
Q 010976 238 YEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHR 294 (496)
Q Consensus 238 ~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~ 294 (496)
|+++++++|+++.+++++|.+|..+|++ ++|+..|+++++++|++..
T Consensus 74 ~~~al~l~P~~~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 74 LNHARMLDPKDIAVHAALAVSHTNEHNA----------NAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHC-------
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999999999999999 9999999999999998754
No 121
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.56 E-value=1.3e-13 Score=121.31 Aligned_cols=124 Identities=19% Similarity=0.161 Sum_probs=113.6
Q ss_pred hhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHH
Q 010976 130 EGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYN 209 (496)
Q Consensus 130 ~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~ 209 (496)
..+...|++++|+..|+++++.+|++..+++++|.++..+|+ +++|+..|++++.++|++..++++
T Consensus 21 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~ 86 (166)
T 1a17_A 21 NDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTEC--------------YGYALGDATRAIELDKKYIKGYYR 86 (166)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCcccHHHHHH
Confidence 345668999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH--HHHccCcchHHHhhhhHHHHHHHHHHHHH
Q 010976 210 WAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA--LQELSAIVPAREKQTIVRTAISKFRAAIQ 287 (496)
Q Consensus 210 lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~--l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~ 287 (496)
+|.++.. +|++++|+ ..|+++++++|++..++..++.+ +...|++ ++|+..+.++..
T Consensus 87 ~a~~~~~----~~~~~~A~-------~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~~~~ 145 (166)
T 1a17_A 87 RAASNMA----LGKFRAAL-------RDYETVVKVKPHDKDAKMKYQECNKIVKQKAF----------ERAIAGDEHKRS 145 (166)
T ss_dssp HHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHH
T ss_pred HHHHHHH----hccHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH----------HHHHHcccchHH
Confidence 9999999 99999999 89999999999999998665555 7777887 999999998766
Q ss_pred h
Q 010976 288 L 288 (496)
Q Consensus 288 l 288 (496)
+
T Consensus 146 ~ 146 (166)
T 1a17_A 146 V 146 (166)
T ss_dssp H
T ss_pred H
Confidence 5
No 122
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.56 E-value=4.5e-14 Score=126.73 Aligned_cols=130 Identities=12% Similarity=0.055 Sum_probs=116.4
Q ss_pred cchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH-
Q 010976 180 PSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA- 258 (496)
Q Consensus 180 ~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~- 258 (496)
....+++++|+..|+++++.+|++..+++.+|.+|.. .|++++|+ ..|+++++++|+++.+++++|.+
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~la~~l 88 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLW----QNDYSNSL-------LAYRQALQLRGENAELYAALATVL 88 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHcCCCCHHHHHHHHHHH
Confidence 4456779999999999999999999999999999999 99999999 89999999999999999999999
Q ss_pred HHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHH
Q 010976 259 LQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAA 338 (496)
Q Consensus 259 l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a 338 (496)
+...|++ ..++|+..|+++++++|++..+++++|.++...|+ +..|..+|.++
T Consensus 89 ~~~~~~~--------~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~a 141 (177)
T 2e2e_A 89 YYQASQH--------MTAQTRAMIDKALALDSNEITALMLLASDAFMQAN-------------------YAQAIELWQKV 141 (177)
T ss_dssp HHHTTTC--------CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHH
T ss_pred HHhcCCc--------chHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccc-------------------HHHHHHHHHHH
Confidence 7788882 01899999999999999999999999999999999 89999999999
Q ss_pred HhcCCcHHH
Q 010976 339 HALKPSYSV 347 (496)
Q Consensus 339 ~~l~p~~~~ 347 (496)
+.++|.+..
T Consensus 142 l~~~p~~~~ 150 (177)
T 2e2e_A 142 MDLNSPRIN 150 (177)
T ss_dssp HHTCCTTSC
T ss_pred HhhCCCCcc
Confidence 999998763
No 123
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.56 E-value=1.4e-13 Score=113.27 Aligned_cols=115 Identities=17% Similarity=0.171 Sum_probs=109.5
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 010976 155 DYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQA 234 (496)
Q Consensus 155 ~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A 234 (496)
.+..++.+|.++...|+ +++|+..|++++.++|++..+++++|.++.. .|++++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~------ 58 (118)
T 1elw_A 3 QVNELKEKGNKALSVGN--------------IDDALQCYSEAIKLDPHNHVLYSNRSAAYAK----KGDYQKAY------ 58 (118)
T ss_dssp HHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCHHHHH------
T ss_pred hHHHHHHHHHHHHHccc--------------HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHh----hccHHHHH------
Confidence 46789999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 010976 235 TKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLY 304 (496)
Q Consensus 235 ~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~ 304 (496)
..|+++++++|+++.+++++|.++..+|++ ++|+..|+++++++|++..++.+++.+..
T Consensus 59 -~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 59 -EDGCKTVDLKPDWGKGYSRKAAALEFLNRF----------EEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp -HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred -HHHHHHHHhCcccHHHHHHHHHHHHHHhhH----------HHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 899999999999999999999999999999 99999999999999999999999988753
No 124
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.55 E-value=1.4e-13 Score=137.73 Aligned_cols=125 Identities=12% Similarity=0.056 Sum_probs=115.8
Q ss_pred hhhhHhhccHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHH
Q 010976 129 EEGRSRQRILTFAAKRYANAIERNPED---------------YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKY 193 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~~~P~~---------------~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 193 (496)
+..++.+|++++|+..|+++++++|++ ..+|+++|.+|..+|+ +++|+.+|
T Consensus 154 g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~--------------~~~A~~~~ 219 (336)
T 1p5q_A 154 GTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA--------------FSAAIESC 219 (336)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCC--------------HHHHHHHH
Confidence 445777899999999999999999999 6999999999999999 99999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhh
Q 010976 194 DEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQT 273 (496)
Q Consensus 194 ~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~ 273 (496)
+++++++|++..+++++|.+|.. +|++++|+ ..|+++++++|++..++.++|.++..+|++
T Consensus 220 ~~al~~~p~~~~a~~~lg~~~~~----~g~~~~A~-------~~~~~al~l~P~~~~a~~~l~~~~~~~~~~-------- 280 (336)
T 1p5q_A 220 NKALELDSNNEKGLSRRGEAHLA----VNDFELAR-------ADFQKVLQLYPNNKAAKTQLAVCQQRIRRQ-------- 280 (336)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCSSCHHHHHHHHHHHHHHHHH--------
T ss_pred HHHHHhCCCcHHHHHHHHHHHHH----CCCHHHHH-------HHHHHHHHHCCCCHHHHHHHHHHHHHHHHH--------
Confidence 99999999999999999999999 99999999 899999999999999999999999999999
Q ss_pred hHHHH-HHHHHHHHHh
Q 010976 274 IVRTA-ISKFRAAIQL 288 (496)
Q Consensus 274 ~~~~A-i~~~~~Al~l 288 (496)
++| ...|++.+..
T Consensus 281 --~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 281 --LAREKKLYANMFER 294 (336)
T ss_dssp --HHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHH
Confidence 777 4567766643
No 125
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.55 E-value=3.7e-14 Score=143.60 Aligned_cols=167 Identities=13% Similarity=0.029 Sum_probs=142.1
Q ss_pred hhhHhhccHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCC-
Q 010976 130 EGRSRQRILTFAAKRYANAIERNP------EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT- 202 (496)
Q Consensus 130 ~~~~~~g~~~~Ai~~~~~al~~~P------~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~- 202 (496)
..+...|++++|+..|++++++.+ ..+.+++++|.+|..+|+ +++|+.++++|+.+.+.
T Consensus 109 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~--------------~~~A~~~~~~al~~~~~~ 174 (378)
T 3q15_A 109 MYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQ--------------THVSMYHILQALDIYQNH 174 (378)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCC--------------cHHHHHHHHHHHHHHHhC
Confidence 345678999999999999998742 356799999999999999 99999999999998543
Q ss_pred ------CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHH
Q 010976 203 ------LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVR 276 (496)
Q Consensus 203 ------~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~ 276 (496)
.+.+++++|.+|.. +|++++|++.|++|+..+++. ...+....+++++|.+|..+|++ +
T Consensus 175 ~~~~~~~~~~~~~lg~~y~~----~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~lg~~y~~~~~~----------~ 239 (378)
T 3q15_A 175 PLYSIRTIQSLFVIAGNYDD----FKHYDKALPHLEAALELAMDI-QNDRFIAISLLNIANSYDRSGDD----------Q 239 (378)
T ss_dssp TTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHTCH----------H
T ss_pred CCchhhHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHCCCH----------H
Confidence 35688999999999 999999997777777766442 11122457899999999999999 9
Q ss_pred HHHHHHHHHHH-----hcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCc
Q 010976 277 TAISKFRAAIQ-----LQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 344 (496)
Q Consensus 277 ~Ai~~~~~Al~-----l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~ 344 (496)
+|+.+|+++++ .+|....+++++|.++..+|+ +..|..++++++.+.+.
T Consensus 240 ~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 240 MAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQ-------------------TQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCC-------------------HHHHHHHHHHHHHHHHH
Confidence 99999999999 788889999999999999999 88999999999988443
No 126
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.55 E-value=2.2e-14 Score=145.84 Aligned_cols=175 Identities=15% Similarity=0.064 Sum_probs=145.8
Q ss_pred hhhhHhhccHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh-----
Q 010976 129 EEGRSRQRILTFAAKRYANAIERNPEDY----DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL----- 199 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~~~P~~~----~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l----- 199 (496)
+..+...|++++|+..|+++++++|++. .+++.+|.+|..+|+ +++|+.+|++++++
T Consensus 55 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~al~~~~~~~ 120 (411)
T 4a1s_A 55 GERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGD--------------YNKAMQYHKHDLTLAKSMN 120 (411)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHHHHHHcc
Confidence 3446678999999999999999999987 589999999999999 99999999999998
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccC----------cchH
Q 010976 200 -CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSA----------IVPA 268 (496)
Q Consensus 200 -~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~----------~~~A 268 (496)
.|....+++++|.+|.. +|++++|+..|++|+..+.+. ...|....+++++|.+|..+|+ +
T Consensus 121 ~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~--- 192 (411)
T 4a1s_A 121 DRLGEAKSSGNLGNTLKV----MGRFDEAAICCERHLTLARQL-GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFG--- 192 (411)
T ss_dssp CHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC---
T ss_pred CchHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHHHcCcccccccchhhh---
Confidence 67788999999999999 999999997777777766553 2245667899999999999999 1
Q ss_pred HHhhhhHHHHHHHHHHHHHhc------CCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcC
Q 010976 269 REKQTIVRTAISKFRAAIQLQ------FDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALK 342 (496)
Q Consensus 269 ~~~~~~~~~Ai~~~~~Al~l~------P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~ 342 (496)
.+....+++|+..|++++++. +....+++++|.++...|+ +..|..+|++++++.
T Consensus 193 ~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~al~~~ 253 (411)
T 4a1s_A 193 DDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGD-------------------FQAAIEHHQERLRIA 253 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC-------------------hHHHHHHHHHHHHHH
Confidence 011111299999999999874 3456799999999999998 788888888888776
Q ss_pred Cc
Q 010976 343 PS 344 (496)
Q Consensus 343 p~ 344 (496)
+.
T Consensus 254 ~~ 255 (411)
T 4a1s_A 254 RE 255 (411)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 127
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.54 E-value=2.1e-14 Score=139.87 Aligned_cols=106 Identities=19% Similarity=0.151 Sum_probs=102.4
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 010976 153 PEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWK 232 (496)
Q Consensus 153 P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~ 232 (496)
|.++.+++.+|.+++..|+ +++|+..|+++++++|++..+++++|.+|.. +|++++|+
T Consensus 1 p~~a~~~~~~g~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~~~~~~A~---- 58 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRK--------------YPEAAACYGRAITRNPLVAVYYTNRALCYLK----MQQPEQAL---- 58 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH----TTCHHHHH----
T ss_pred ChhHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCccHHHHHHHHHHHHH----hcCHHHHH----
Confidence 6788999999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCH
Q 010976 233 QATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH 293 (496)
Q Consensus 233 ~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~ 293 (496)
..|+++++++|++..+++++|.+|..+|++ ++|+..|+++++++|++.
T Consensus 59 ---~~~~~al~~~p~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~al~l~p~~~ 106 (281)
T 2c2l_A 59 ---ADCRRALELDGQSVKAHFFLGQCQLEMESY----------DEAIANLQRAYSLAKEQR 106 (281)
T ss_dssp ---HHHHHHTTSCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHTT
T ss_pred ---HHHHHHHHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCccch
Confidence 899999999999999999999999999999 999999999999999764
No 128
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.54 E-value=2.3e-13 Score=132.92 Aligned_cols=160 Identities=16% Similarity=0.051 Sum_probs=133.5
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC-
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDY------DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL- 203 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~------~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~- 203 (496)
.+...|++++|+..|.++++..+... ..++.+|.++...|+ +++|+..|++++.+.+..
T Consensus 84 ~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~al~~~~~~~ 149 (293)
T 2qfc_A 84 MLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVD--------------YEYCILELKKLLNQQLTGI 149 (293)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSC--------------HHHHHHHHHHHHTTCCCSS
T ss_pred HHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCC--------------HHHHHHHHHHHHHHHhcCC
Confidence 35568999999999999999988765 346778899999999 999999999999886554
Q ss_pred -----HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCC----HHHHHHHHHHHHHccCcchHHHhhhh
Q 010976 204 -----HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNS----PQALNNWGLALQELSAIVPAREKQTI 274 (496)
Q Consensus 204 -----~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~----~~a~~~lg~~l~~~g~~~~A~~~~~~ 274 (496)
..+++++|.+|.. +|++++|+..|++|+..++ ..|++ ..+++++|.+|..+|++
T Consensus 150 ~~~~~~~~~~~lg~~y~~----~~~~~~A~~~~~kal~~~~----~~~~~~~~~~~~~~nlg~~y~~~~~y--------- 212 (293)
T 2qfc_A 150 DVYQNLYIENAIANIYAE----NGYLKKGIDLFEQILKQLE----ALHDNEEFDVKVRYNHAKALYLDSRY--------- 212 (293)
T ss_dssp CTTHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHTTCH---------
T ss_pred chHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHH----hcCccccchHHHHHhHHHHHHHHhhH---------
Confidence 6799999999999 9999999966666665554 34443 26999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC------CHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHH-HHHHHHHHhc
Q 010976 275 VRTAISKFRAAIQLQFD------FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQS-AIYIAAAHAL 341 (496)
Q Consensus 275 ~~~Ai~~~~~Al~l~P~------~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A-~~~~~~a~~l 341 (496)
++|+.+|++++++.++ ...+++++|.+|..+|+ +..| ..+|++|+.+
T Consensus 213 -~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~-------------------~~~Ai~~~~~~Al~~ 266 (293)
T 2qfc_A 213 -EESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEY-------------------EEAEIEDAYKKASFF 266 (293)
T ss_dssp -HHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTC-------------------CHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCC-------------------cHHHHHHHHHHHHHH
Confidence 9999999999998643 27899999999999998 6677 6667777654
No 129
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.54 E-value=3.3e-14 Score=138.70 Aligned_cols=191 Identities=13% Similarity=0.093 Sum_probs=150.6
Q ss_pred hhhhhhcHHHHHHHHHHhhccc----------------hhhhHhhcc--------------------HHHHHHHHHHHHH
Q 010976 107 PHQLAEQNNAAMELINSVTGVD----------------EEGRSRQRI--------------------LTFAAKRYANAIE 150 (496)
Q Consensus 107 ~~~~~~~~~~A~~~~~~~l~~~----------------~~~~~~~g~--------------------~~~Ai~~~~~al~ 150 (496)
.+...|+++.|+..+.+++... +..+...|+ +++|+..|++++.
T Consensus 92 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~ 171 (338)
T 3ro2_A 92 TLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLS 171 (338)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 3456788899998888877654 234556788 9999999999988
Q ss_pred h------CCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHH
Q 010976 151 R------NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL------HDAFYNWAIAISDRA 218 (496)
Q Consensus 151 ~------~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~------~~a~~~lg~~~~~~~ 218 (496)
+ .+....++.++|.++...|+ +++|+..|++++.+.+.. ..+++++|.++..
T Consensus 172 ~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~-- 235 (338)
T 3ro2_A 172 LVTALGDRAAQGRAFGNLGNTHYLLGN--------------FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIF-- 235 (338)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH--
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHhCC--------------HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH--
Confidence 7 34456789999999999999 999999999999986543 3489999999999
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCC------
Q 010976 219 KMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDF------ 292 (496)
Q Consensus 219 ~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~------ 292 (496)
.|++++|+..|++++..+... ...+....+++++|.++..+|++ ++|+..|++++++.+..
T Consensus 236 --~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~a~~~~~~~~~~~~~ 302 (338)
T 3ro2_A 236 --LGEFETASEYYKKTLLLARQL-KDRAVEAQSCYSLGNTYTLLQDY----------EKAIDYHLKHLAIAQELKDRIGE 302 (338)
T ss_dssp --HTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHHTCHHHH
T ss_pred --cCCHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHhcCH----------HHHHHHHHHHHHHHHhcCCcHHH
Confidence 999999996555555444331 00111277899999999999999 99999999999986543
Q ss_pred HHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcH
Q 010976 293 HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 345 (496)
Q Consensus 293 ~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~ 345 (496)
..++.++|.++..+|+ +..|..+|++++++.+..
T Consensus 303 ~~~~~~la~~~~~~g~-------------------~~~A~~~~~~a~~~~~~~ 336 (338)
T 3ro2_A 303 GRACWSLGNAYTALGN-------------------HDQAMHFAEKHLEISREV 336 (338)
T ss_dssp HHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHcCC-------------------hHHHHHHHHHHHHHHHhh
Confidence 5689999999999999 899999999999887643
No 130
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.54 E-value=1.1e-13 Score=128.99 Aligned_cols=166 Identities=14% Similarity=-0.048 Sum_probs=135.2
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc----CCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHH
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESA----DNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDA 206 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a 206 (496)
.+...+++++|+.+|+++++. .++.+++++|.+|.. + + +++|+.+|++++ ++.++.+
T Consensus 27 ~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~--------------~~~A~~~~~~A~--~~g~~~a 87 (212)
T 3rjv_A 27 TWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQAD--------------YPQARQLAEKAV--EAGSKSG 87 (212)
T ss_dssp HHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCC--------------HHHHHHHHHHHH--HTTCHHH
T ss_pred HHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCC--------------HHHHHHHHHHHH--HCCCHHH
Confidence 345579999999999999876 689999999999998 6 6 999999999995 4689999
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHH----ccCcchHHHhhhhHHHHHH
Q 010976 207 FYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNW--NSPQALNNWGLALQE----LSAIVPAREKQTIVRTAIS 280 (496)
Q Consensus 207 ~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P--~~~~a~~~lg~~l~~----~g~~~~A~~~~~~~~~Ai~ 280 (496)
+++||.+|..-....+++++|+ .+|+++++..+ +++.++++||.+|.. .+++ ++|+.
T Consensus 88 ~~~Lg~~y~~g~g~~~d~~~A~-------~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~----------~~A~~ 150 (212)
T 3rjv_A 88 EIVLARVLVNRQAGATDVAHAI-------TLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDD----------VKASE 150 (212)
T ss_dssp HHHHHHHHTCGGGSSCCHHHHH-------HHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCH----------HHHHH
T ss_pred HHHHHHHHHcCCCCccCHHHHH-------HHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCH----------HHHHH
Confidence 9999999963111145777777 89999999988 459999999999999 6777 99999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHH
Q 010976 281 KFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 346 (496)
Q Consensus 281 ~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~ 346 (496)
+|++|+++ +.++.++++||.+|..-... .... .+.+|..+|+++.+......
T Consensus 151 ~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg----~~~~---------d~~~A~~~~~~A~~~g~~~A 202 (212)
T 3rjv_A 151 YFKGSSSL-SRTGYAEYWAGMMFQQGEKG----FIEP---------NKQKALHWLNVSCLEGFDTG 202 (212)
T ss_dssp HHHHHHHT-SCTTHHHHHHHHHHHHCBTT----TBCC---------CHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHc-CCCHHHHHHHHHHHHcCCCC----CCCC---------CHHHHHHHHHHHHHcCCHHH
Confidence 99999999 77888999999999764200 0000 17899999999998865444
No 131
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.54 E-value=1.2e-13 Score=117.89 Aligned_cols=107 Identities=13% Similarity=0.084 Sum_probs=96.2
Q ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHH
Q 010976 203 LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKF 282 (496)
Q Consensus 203 ~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~ 282 (496)
.+.++.++|.+++. .|++++|+ .+|++|++++|+++.+|+++|.+|..+|++ ++|+..|
T Consensus 7 ~A~a~~~lG~~~~~----~~~~~~A~-------~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~----------~~A~~~~ 65 (127)
T 4gcn_A 7 AAIAEKDLGNAAYK----QKDFEKAH-------VHYDKAIELDPSNITFYNNKAAVYFEEKKF----------AECVQFC 65 (127)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHH
T ss_pred HHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCCHHHHHhHHHHHHHhhhH----------HHHHHHH
Confidence 45678999999999 99999999 899999999999999999999999999999 9999999
Q ss_pred HHHHHhcCCCH-------HHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHH
Q 010976 283 RAAIQLQFDFH-------RAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYS 349 (496)
Q Consensus 283 ~~Al~l~P~~~-------~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~ 349 (496)
+++++++|++. .+++++|.++..+|+ |..|+.+|++++...|+.....
T Consensus 66 ~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~-------------------~~~A~~~~~kal~~~~~~~~~~ 120 (127)
T 4gcn_A 66 EKAVEVGRETRADYKLIAKAMSRAGNAFQKQND-------------------LSLAVQWFHRSLSEFRDPELVK 120 (127)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHSCCHHHHH
T ss_pred HHHHHhCcccchhhHHHHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHhhCcCHHHHH
Confidence 99999998764 577888888888887 9999999999999998765443
No 132
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=1.6e-13 Score=118.13 Aligned_cols=120 Identities=18% Similarity=0.097 Sum_probs=113.3
Q ss_pred hCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHHHHcCCHHHH
Q 010976 151 RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL---HDAFYNWAIAISDRAKMRGRTKEA 227 (496)
Q Consensus 151 ~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~---~~a~~~lg~~~~~~~~~~g~~~eA 227 (496)
.+|.+...++.+|.++...|+ +++|+..|+++++++|++ ..+++++|.+|.. .|++++|
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A 84 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGD--------------YGGALAAYTQALGLDATPQDQAVLHRNRAACHLK----LEDYDKA 84 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTC--------------HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH----TTCHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCC--------------HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH----HccHHHH
Confidence 468899999999999999999 999999999999999998 8999999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 010976 228 EELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYG 305 (496)
Q Consensus 228 ~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~ 305 (496)
+ ..|+++++++|+++.+++++|.++..+|++ ++|+..|+++++++|++..++..++.+...
T Consensus 85 ~-------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 85 E-------TEASKAIEKDGGDVKALYRRSQALEKLGRL----------DQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp H-------HHHHHHHHHTSCCHHHHHHHHHHHHHHTCH----------HHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred H-------HHHHHHHhhCccCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 9 889999999999999999999999999999 999999999999999999999988887543
No 133
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.53 E-value=1.5e-13 Score=147.06 Aligned_cols=169 Identities=9% Similarity=0.059 Sum_probs=147.3
Q ss_pred HHHHHHHHHhhccch----------hhhHhhcc----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc--CC
Q 010976 115 NAAMELINSVTGVDE----------EGRSRQRI----------LTFAAKRYANAIERNPEDYDALYNWALVLQESA--DN 172 (496)
Q Consensus 115 ~~A~~~~~~~l~~~~----------~~~~~~g~----------~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~--~~ 172 (496)
++|+..+.+++.... ......++ +++++..|+++++.+|++..+|+.++.++..++ +
T Consensus 46 eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~- 124 (567)
T 1dce_A 46 ESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPN- 124 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCC-
T ss_pred HHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccccc-
Confidence 566788888777662 22233455 999999999999999999999999999999999 6
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHHHhcCCCCHHH
Q 010976 173 VSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRG-RTKEAEELWKQATKNYEKAVQLNWNSPQA 251 (496)
Q Consensus 173 ~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g-~~~eA~~~~~~A~~~~~~Al~l~P~~~~a 251 (496)
+++++++++++++++|.+..+|++++.++.. .| .+++++ +++.++++.+|.+..+
T Consensus 125 -------------~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~----l~~~~~~el-------~~~~~~I~~~p~n~sa 180 (567)
T 1dce_A 125 -------------WARELELCARFLEADERNFHCWDYRRFVAAQ----AAVAPAEEL-------AFTDSLITRNFSNYSS 180 (567)
T ss_dssp -------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TCCCHHHHH-------HHHHTTTTTTCCCHHH
T ss_pred -------------HHHHHHHHHHHHhhccccccHHHHHHHHHHH----cCCChHHHH-------HHHHHHHHHCCCCccH
Confidence 7999999999999999999999999999999 99 888887 8999999999999999
Q ss_pred HHHHHHHHHHccCcchHH----HhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010976 252 LNNWGLALQELSAIVPAR----EKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 252 ~~~lg~~l~~~g~~~~A~----~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~ 308 (496)
|+++|.++..+++..++. -..+.++++++++.+|+.++|++..+|+.++.++...++
T Consensus 181 W~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~~~~ 241 (567)
T 1dce_A 181 WHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEP 241 (567)
T ss_dssp HHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhcCCC
Confidence 999999999975542221 123667999999999999999999999999999988776
No 134
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.53 E-value=2e-14 Score=139.02 Aligned_cols=172 Identities=12% Similarity=0.050 Sum_probs=135.2
Q ss_pred hhccHHHHHHHHHHHHHhCCCCHHHHHHH-------HHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHH
Q 010976 134 RQRILTFAAKRYANAIERNPEDYDALYNW-------ALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDA 206 (496)
Q Consensus 134 ~~g~~~~Ai~~~~~al~~~P~~~~a~~~l-------g~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a 206 (496)
.-+++..|...|.++++++|+.+++|.++ +.++..+++ ..+++..+++++.+.|....+
T Consensus 18 ~~~d~~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r--------------~~~a~~~~~~~l~l~p~~l~a 83 (282)
T 4f3v_A 18 LPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWY--------------SRRNFGQLSGSVQISMSTLNA 83 (282)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHH--------------TGGGTTHHHHTTTCCGGGGCC
T ss_pred cCCCHHHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHH--------------HHHHHHHHHHHhcCChhhhhh
Confidence 36899999999999999999999999999 899999999 999999999999998886555
Q ss_pred HHH---------------------HHHHHHHHHHHcCCHHHHHHHHH--------------------------HHHHHHH
Q 010976 207 FYN---------------------WAIAISDRAKMRGRTKEAEELWK--------------------------QATKNYE 239 (496)
Q Consensus 207 ~~~---------------------lg~~~~~~~~~~g~~~eA~~~~~--------------------------~A~~~~~ 239 (496)
+++ ++.++.. .|++++|.+.|+ .|+..|+
T Consensus 84 ~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~----~g~y~eA~~~l~~~~~~~p~~~~~~~~a~l~~~~~r~~dA~~~l~ 159 (282)
T 4f3v_A 84 RIAIGGLYGDITYPVTSPLAITMGFAACEAA----QGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVK 159 (282)
T ss_dssp EEECCTTTCCCEEECSSHHHHHHHHHHHHHH----HTCHHHHHHHHTSSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred hhccCCcccccccccCCHhHHHHHHHHHHHH----CCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 555 7788888 999999995431 2333444
Q ss_pred HHHhcCCC-C-HHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhc--CC-CHHHHHHHHHHHHHcchhHHhcc
Q 010976 240 KAVQLNWN-S-PQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ--FD-FHRAIYNLGTVLYGLAEDTLRTG 314 (496)
Q Consensus 240 ~Al~l~P~-~-~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~--P~-~~~a~~~lg~~~~~~g~~~~a~~ 314 (496)
+++...+. . ..+++++|.++..+|++ ++|+.+|++++.-. |. ...+++++|.++..+|+
T Consensus 160 ~a~~~~d~~~~~~a~~~LG~al~~LG~~----------~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr------ 223 (282)
T 4f3v_A 160 SAGKWPDKFLAGAAGVAHGVAAANLALF----------TEAERRLTEANDSPAGEACARAIAWYLAMARRSQGN------ 223 (282)
T ss_dssp TGGGCSCHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTC------
T ss_pred HhhccCCcccHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCC------
Confidence 33332111 0 23555555555555555 99999999998654 55 56799999999999998
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Q 010976 315 GTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALR 353 (496)
Q Consensus 315 ~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al~ 353 (496)
..+|...|++++..+|+ .....+|.
T Consensus 224 -------------~deA~~~l~~a~a~~P~-~~~~~aL~ 248 (282)
T 4f3v_A 224 -------------ESAAVALLEWLQTTHPE-PKVAAALK 248 (282)
T ss_dssp -------------HHHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred -------------HHHHHHHHHHHHhcCCc-HHHHHHHh
Confidence 78999999999999999 77666664
No 135
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.53 E-value=9.4e-14 Score=123.29 Aligned_cols=105 Identities=23% Similarity=0.223 Sum_probs=98.8
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 210 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~l 210 (496)
.+...|++++|+.+|+++++++|+++.+|+++|.+|..+|+ +++|+.+|+++++++|++..+|+++
T Consensus 20 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~l 85 (164)
T 3sz7_A 20 AAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQ--------------HEKAAEDAELATVVDPKYSKAWSRL 85 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccC--------------HHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 45678999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 010976 211 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ 260 (496)
Q Consensus 211 g~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~ 260 (496)
|.+|.. +|++++|+ .+|+++++++|++..++++++....
T Consensus 86 g~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~~~l~~~ 124 (164)
T 3sz7_A 86 GLARFD----MADYKGAK-------EAYEKGIEAEGNGGSDAMKRGLETT 124 (164)
T ss_dssp HHHHHH----TTCHHHHH-------HHHHHHHHHHSSSCCHHHHHHHHHH
T ss_pred HHHHHH----ccCHHHHH-------HHHHHHHHhCCCchHHHHHHHHHHH
Confidence 999999 99999999 8999999999999998887776544
No 136
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.52 E-value=1.3e-13 Score=134.26 Aligned_cols=152 Identities=16% Similarity=-0.005 Sum_probs=115.7
Q ss_pred hhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHH
Q 010976 130 EGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYN 209 (496)
Q Consensus 130 ~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~ 209 (496)
..+...|++++|+..|+++++++|+++.+++++|.+|..+|+ +++|+..|+++++++|++..++++
T Consensus 12 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~~~ 77 (281)
T 2c2l_A 12 NRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQ--------------PEQALADCRRALELDGQSVKAHFF 77 (281)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHTTSCTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcC--------------HHHHHHHHHHHHHhCCCCHHHHHH
Confidence 345678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH---HHHccCcchH----------------HH
Q 010976 210 WAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA---LQELSAIVPA----------------RE 270 (496)
Q Consensus 210 lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~---l~~~g~~~~A----------------~~ 270 (496)
+|.+|.. +|++++|+ ..|+++++++|++...+...... +.+...+... .-
T Consensus 78 lg~~~~~----~g~~~~A~-------~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l 146 (281)
T 2c2l_A 78 LGQCQLE----MESYDEAI-------ANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRL 146 (281)
T ss_dssp HHHHHHH----TTCHHHHH-------HHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH
T ss_pred HHHHHHH----cCCHHHHH-------HHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 9999999 99999999 67777777766542211111111 1111111000 00
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc
Q 010976 271 KQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGL 306 (496)
Q Consensus 271 ~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~ 306 (496)
..|++++|++.|+++++++|++......++.++...
T Consensus 147 ~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 182 (281)
T 2c2l_A 147 IAAERERELEECQRNHEGHEDDGHIRAQQACIEAKH 182 (281)
T ss_dssp HHHHHHHHHTTTSGGGTTTSCHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccchhhhhhHHHHHHHHH
Confidence 235558888888888888888877777777666555
No 137
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.51 E-value=2.1e-13 Score=138.01 Aligned_cols=171 Identities=12% Similarity=0.067 Sum_probs=138.0
Q ss_pred hhhhhcHHHHHHHHHHhhccc----------------hhhhHhhccHHHHHHHHHHHHHhCCC-------CHHHHHHHHH
Q 010976 108 HQLAEQNNAAMELINSVTGVD----------------EEGRSRQRILTFAAKRYANAIERNPE-------DYDALYNWAL 164 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~----------------~~~~~~~g~~~~Ai~~~~~al~~~P~-------~~~a~~~lg~ 164 (496)
+...|+++.|+..+.+++... +..+...|++++|+.+|++++.+.+. ...++.++|.
T Consensus 111 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~ 190 (378)
T 3q15_A 111 EFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAG 190 (378)
T ss_dssp HHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH
Confidence 346789999999999988753 33566789999999999999987543 2568899999
Q ss_pred HHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 010976 165 VLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT------LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNY 238 (496)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~------~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~ 238 (496)
+|..+|+ +++|+++|++++.+.+. ...+++++|.+|.. +|++++|+..|++|+..+
T Consensus 191 ~y~~~~~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~----~~~~~~A~~~~~~al~~~ 252 (378)
T 3q15_A 191 NYDDFKH--------------YDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDR----SGDDQMAVEHFQKAAKVS 252 (378)
T ss_dssp HHHHTTC--------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHH
T ss_pred HHHHhCC--------------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHH
Confidence 9999999 99999999999998431 35689999999999 999999997666666665
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhc-----CCCHHHHHHHHHHHHHcch
Q 010976 239 EKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ-----FDFHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 239 ~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~-----P~~~~a~~~lg~~~~~~g~ 308 (496)
++. .+|....+++++|.++..+|++ ++|+..|++++++. +.....+..++.++...++
T Consensus 253 ~~~--~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~ly~~~~~ 315 (378)
T 3q15_A 253 REK--VPDLLPKVLFGLSWTLCKAGQT----------QKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVD 315 (378)
T ss_dssp HHH--CGGGHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCCTTCCSCHHHHHHHHHHHHSSSCC
T ss_pred Hhh--CChhHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCc
Confidence 543 5677799999999999999999 99999999999873 3344455556666655554
No 138
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.51 E-value=6.1e-13 Score=111.32 Aligned_cols=110 Identities=22% Similarity=0.251 Sum_probs=105.4
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 210 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~l 210 (496)
.+...|++++|+..|++++..+|+++.+++.+|.++...|+ +++|+..|++++.++|++..+++++
T Consensus 21 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 21 EQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGN--------------YAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhc--------------hHHHHHHHHHHHhcCccCHHHHHHH
Confidence 45567999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCc
Q 010976 211 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 265 (496)
Q Consensus 211 g~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 265 (496)
|.++.. .|++++|+ ..|+++++++|++..++.++|.++..+|++
T Consensus 87 ~~~~~~----~~~~~~A~-------~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 87 GLALSS----LNKHVEAV-------AYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHH----hCCHHHHH-------HHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 999999 99999999 899999999999999999999999999986
No 139
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.50 E-value=7.6e-14 Score=122.95 Aligned_cols=103 Identities=16% Similarity=0.095 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC-------CHH-----HHHHHHHHHHHccCcchHHHh
Q 010976 204 HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN-------SPQ-----ALNNWGLALQELSAIVPAREK 271 (496)
Q Consensus 204 ~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~-------~~~-----a~~~lg~~l~~~g~~~~A~~~ 271 (496)
+..+.++|..++. .|+|++|+ ..|++||+++|+ +.. +|+|+|.++..+|++
T Consensus 11 a~~~~~~G~~l~~----~g~~eeAi-------~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~------ 73 (159)
T 2hr2_A 11 AYLALSDAQRQLV----AGEYDEAA-------ANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSF------ 73 (159)
T ss_dssp HHHHHHHHHHHHH----HTCHHHHH-------HHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCH------
T ss_pred HHHHHHHHHHHHH----CCCHHHHH-------HHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCH------
Confidence 4678899999999 99999999 899999999999 544 999999999999999
Q ss_pred hhhHHHHHHHHHHHHHh-------cCCCHHHH----HHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHh
Q 010976 272 QTIVRTAISKFRAAIQL-------QFDFHRAI----YNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHA 340 (496)
Q Consensus 272 ~~~~~~Ai~~~~~Al~l-------~P~~~~a~----~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 340 (496)
++|+.+|++||++ +|++..+| +++|.++..+|+ |.+|+.+|+++++
T Consensus 74 ----~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr-------------------~eEAl~~y~kAle 130 (159)
T 2hr2_A 74 ----DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGR-------------------GAEAMPEFKKVVE 130 (159)
T ss_dssp ----HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCC-------------------HHHHHHHHHHHHh
Confidence 9999999999999 99999999 999999999999 9999999999999
Q ss_pred cCCcHH
Q 010976 341 LKPSYS 346 (496)
Q Consensus 341 l~p~~~ 346 (496)
++|++.
T Consensus 131 l~p~d~ 136 (159)
T 2hr2_A 131 MIEERK 136 (159)
T ss_dssp HHHHCC
T ss_pred cCCCcH
Confidence 999876
No 140
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.49 E-value=7.9e-13 Score=140.11 Aligned_cols=156 Identities=12% Similarity=0.031 Sum_probs=139.8
Q ss_pred hccHH-------HHHHHHHHHHH-hCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCH-H
Q 010976 135 QRILT-------FAAKRYANAIE-RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLH-D 205 (496)
Q Consensus 135 ~g~~~-------~Ai~~~~~al~-~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~-~ 205 (496)
.|+++ +|+..|+++++ ++|++..+|..+|.++...|+ +++|+..|+++++++|.++ .
T Consensus 292 ~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~ 357 (530)
T 2ooe_A 292 KGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMK--------------YEKVHSIYNRLLAIEDIDPTL 357 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHSSSSCHHH
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCC--------------HHHHHHHHHHHhCccccCchH
Confidence 57776 89999999997 899999999999999999999 9999999999999999986 6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH-HHHccCcchHHHhhhhHHHHHHHHHH
Q 010976 206 AFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA-LQELSAIVPAREKQTIVRTAISKFRA 284 (496)
Q Consensus 206 a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~-l~~~g~~~~A~~~~~~~~~Ai~~~~~ 284 (496)
+|.++|.++.. .|++++|+ ..|++|++..|.+...+...+.+ +...|++ ++|+..|++
T Consensus 358 ~~~~~~~~~~~----~~~~~~A~-------~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~----------~~A~~~~e~ 416 (530)
T 2ooe_A 358 VYIQYMKFARR----AEGIKSGR-------MIFKKAREDARTRHHVYVTAALMEYYCSKDK----------SVAFKIFEL 416 (530)
T ss_dssp HHHHHHHHHHH----HHHHHHHH-------HHHHHHHTCTTCCTHHHHHHHHHHHHHTCCH----------HHHHHHHHH
T ss_pred HHHHHHHHHHH----hcCHHHHH-------HHHHHHHhccCCchHHHHHHHHHHHHHcCCh----------hHHHHHHHH
Confidence 99999999988 88888888 88899999999888877777665 3458888 999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCc
Q 010976 285 AIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 344 (496)
Q Consensus 285 Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~ 344 (496)
+++..|+++.+|.+++.++...|+ +..|..+|++++...|.
T Consensus 417 al~~~p~~~~~~~~~~~~~~~~g~-------------------~~~Ar~~~~~al~~~~~ 457 (530)
T 2ooe_A 417 GLKKYGDIPEYVLAYIDYLSHLNE-------------------DNNTRVLFERVLTSGSL 457 (530)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTTTC-------------------HHHHHHHHHHHHHSCCS
T ss_pred HHHHCCCCHHHHHHHHHHHHhCCC-------------------HhhHHHHHHHHHhccCC
Confidence 999999999999999999999998 78889999999987654
No 141
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.49 E-value=3.4e-13 Score=113.99 Aligned_cols=101 Identities=16% Similarity=0.040 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHH
Q 010976 206 AFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAA 285 (496)
Q Consensus 206 a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~A 285 (496)
.++.+|.++.. .|++++|+ ..|+++++++|+++.+|+++|.++..+|++ ++|+..|+++
T Consensus 19 ~~~~~g~~~~~----~g~~~~A~-------~~~~~al~~~P~~~~a~~~lg~~~~~~g~~----------~~A~~~~~~a 77 (121)
T 1hxi_A 19 NPMEEGLSMLK----LANLAEAA-------LAFEAVCQKEPEREEAWRSLGLTQAENEKD----------GLAIIALNHA 77 (121)
T ss_dssp CHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHH
T ss_pred hHHHHHHHHHH----cCCHHHHH-------HHHHHHHHHCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHH
Confidence 47889999999 99999999 899999999999999999999999999999 9999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHH
Q 010976 286 IQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 346 (496)
Q Consensus 286 l~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~ 346 (496)
++++|++..+++++|.+|...|+ +.+|..+|+++++++|++.
T Consensus 78 l~l~P~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 78 RMLDPKDIAVHAALAVSHTNEHN-------------------ANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHC------
T ss_pred HHhCCCCHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHhCcCCC
Confidence 99999999999999999999999 8999999999999999765
No 142
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.49 E-value=2.5e-13 Score=114.49 Aligned_cols=109 Identities=23% Similarity=0.264 Sum_probs=103.7
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 210 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~l 210 (496)
.+...|++++|+..|+++++.+|++..+++++|.++...|+ +++|+..|+++++++|++..+++++
T Consensus 25 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~l 90 (133)
T 2lni_A 25 ECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLE--------------FQLALKDCEECIQLEPTFIKGYTRK 90 (133)
T ss_dssp HHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhcc--------------HHHHHHHHHHHHHhCCCchHHHHHH
Confidence 35568999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccC
Q 010976 211 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSA 264 (496)
Q Consensus 211 g~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~ 264 (496)
|.++.. +|++++|+ ..|+++++++|.+..++.+++.++..+|+
T Consensus 91 a~~~~~----~~~~~~A~-------~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 91 AAALEA----MKDYTKAM-------DVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHH----TTCHHHHH-------HHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHH----HhhHHHHH-------HHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 999999 99999999 89999999999999999999999998774
No 143
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.48 E-value=4.8e-13 Score=112.15 Aligned_cols=119 Identities=18% Similarity=0.138 Sum_probs=109.1
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 010976 154 EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQ 233 (496)
Q Consensus 154 ~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~ 233 (496)
..+.+++.+|.++...|+ +++|+..|++++.++|++..+++++|.++.. .|++++|+
T Consensus 2 ~~~~~~~~l~~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~----~~~~~~A~----- 58 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKD--------------FDTALKHYDKAKELDPTNMTYITNQAAVYFE----KGDYNKCR----- 58 (131)
T ss_dssp HHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCHHHHH-----
T ss_pred hHHHHHHHHHHHHHHhcC--------------HHHHHHHHHHHHhcCCccHHHHHHHHHHHHH----hccHHHHH-----
Confidence 446789999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHhcCCCC-------HHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc
Q 010976 234 ATKNYEKAVQLNWNS-------PQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGL 306 (496)
Q Consensus 234 A~~~~~~Al~l~P~~-------~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~ 306 (496)
..|++++.++|.+ ..+++++|.++..+|++ ++|+..|++++++.| +...+..++.++..+
T Consensus 59 --~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~----------~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 125 (131)
T 1elr_A 59 --ELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKY----------KDAIHFYNKSLAEHR-TPDVLKKCQQAEKIL 125 (131)
T ss_dssp --HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCC-CHHHHHHHHHHHHHH
T ss_pred --HHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccH----------HHHHHHHHHHHHhCC-CHHHHHHHHHHHHHH
Confidence 6777777777766 89999999999999999 999999999999999 689999999988776
Q ss_pred ch
Q 010976 307 AE 308 (496)
Q Consensus 307 g~ 308 (496)
++
T Consensus 126 ~~ 127 (131)
T 1elr_A 126 KE 127 (131)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 144
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.48 E-value=1.1e-13 Score=136.24 Aligned_cols=171 Identities=18% Similarity=0.175 Sum_probs=138.8
Q ss_pred hhcHHHHHHHHHHhhccchhhhHh-hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHH
Q 010976 111 AEQNNAAMELINSVTGVDEEGRSR-QRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEA 189 (496)
Q Consensus 111 ~~~~~~A~~~~~~~l~~~~~~~~~-~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A 189 (496)
.+++++|..++.++.......++. .++++.|+.+|.++ |.+|...|+ +++|
T Consensus 4 ~~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a--------------~~~~~~~g~--------------~~~A 55 (307)
T 2ifu_A 4 AQKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKA--------------AVAFKNAKQ--------------LEQA 55 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHH--------------HHHHHHTTC--------------HHHH
T ss_pred cchHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHH--------------HHHHHHcCC--------------HHHH
Confidence 577888888888777654333333 57899999998876 678889999 9999
Q ss_pred HHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHc
Q 010976 190 CKKYDEATRLCPTL------HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNW-NSPQALNNWGLALQEL 262 (496)
Q Consensus 190 ~~~~~~Al~l~P~~------~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P-~~~~a~~~lg~~l~~~ 262 (496)
+.+|.+++.+.+.. ..++.++|.+|.. +|++++|+.+|++|+..+.+.- ++ ....+++++|.+|..
T Consensus 56 ~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~----~g~~~~A~~~~~~Al~l~~~~g--~~~~~a~~~~~lg~~~~~- 128 (307)
T 2ifu_A 56 KDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKD----LQRMPEAVQYIEKASVMYVENG--TPDTAAMALDRAGKLMEP- 128 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCGGGGHHHHHHHHHHHHTTT--CHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh----CCCHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHc-
Confidence 99999999996543 5689999999999 9999999977777776654310 11 125689999999998
Q ss_pred cCcchHHHhhhhHHHHHHHHHHHHHhcCCC------HHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHH
Q 010976 263 SAIVPAREKQTIVRTAISKFRAAIQLQFDF------HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIA 336 (496)
Q Consensus 263 g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~------~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~ 336 (496)
|++ ++|+.+|++|+++.+.. ..++.++|.+|..+|+ |.+|+.+|+
T Consensus 129 g~~----------~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~-------------------~~~A~~~~~ 179 (307)
T 2ifu_A 129 LDL----------SKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQK-------------------FDEAAASLQ 179 (307)
T ss_dssp TCH----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-------------------HHHHHHHHH
T ss_pred CCH----------HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCC-------------------HHHHHHHHH
Confidence 999 99999999999998754 5789999999999999 899999999
Q ss_pred HHHhcCCcH
Q 010976 337 AAHALKPSY 345 (496)
Q Consensus 337 ~a~~l~p~~ 345 (496)
+++.+.|..
T Consensus 180 ~al~~~~~~ 188 (307)
T 2ifu_A 180 KEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 999886543
No 145
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.48 E-value=2.1e-13 Score=111.25 Aligned_cols=107 Identities=13% Similarity=0.075 Sum_probs=102.9
Q ss_pred hCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Q 010976 151 RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEEL 230 (496)
Q Consensus 151 ~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~ 230 (496)
++|+++.+++.+|.++...|+ +++|+..|+++++++|++..+++++|.++.. +|++++|+
T Consensus 1 l~p~~~~~~~~~~~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~----~~~~~~A~-- 60 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYDAGN--------------YTESIDLFEKAIQLDPEESKYWLMKGKALYN----LERYEEAV-- 60 (112)
T ss_dssp CCCSSTTGGGGHHHHHHSSCC--------------HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----TTCHHHHH--
T ss_pred CCCCcHHHHHHHHHHHHHhhh--------------HHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH----ccCHHHHH--
Confidence 468899999999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHc-cCcchHHHhhhhHHHHHHHHHHHHHhcCCC
Q 010976 231 WKQATKNYEKAVQLNWN--SPQALNNWGLALQEL-SAIVPAREKQTIVRTAISKFRAAIQLQFDF 292 (496)
Q Consensus 231 ~~~A~~~~~~Al~l~P~--~~~a~~~lg~~l~~~-g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~ 292 (496)
..|+++++++|. +..+++++|.++..+ |++ ++|+.+|++++...|.+
T Consensus 61 -----~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~----------~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 61 -----DCYNYVINVIEDEYNKDVWAAKADALRYIEGKE----------VEAEIAEARAKLEHHHH 110 (112)
T ss_dssp -----HHHHHHHHTSCCTTCHHHHHHHHHHHTTCSSCS----------HHHHHHHHHHGGGCCCC
T ss_pred -----HHHHHHHHhCcccchHHHHHHHHHHHHHHhCCH----------HHHHHHHHHHhhcccCC
Confidence 899999999999 999999999999999 999 99999999999999875
No 146
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.48 E-value=2.4e-13 Score=120.38 Aligned_cols=112 Identities=16% Similarity=0.097 Sum_probs=102.6
Q ss_pred hhhhHhhccHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHH
Q 010976 129 EEGRSRQRILTFAAKRYANAIER------------------NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEAC 190 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~~------------------~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~ 190 (496)
+..+++.|+|++|+..|.+++.+ +|.+..+|+++|.+|..+|+ +++|+
T Consensus 18 G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~--------------~~~A~ 83 (162)
T 3rkv_A 18 GNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGD--------------LHEAE 83 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTC--------------HHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCc--------------HHHHH
Confidence 34466789999999999999999 77788999999999999999 99999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHccCc
Q 010976 191 KKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP-QALNNWGLALQELSAI 265 (496)
Q Consensus 191 ~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~-~a~~~lg~~l~~~g~~ 265 (496)
..|++++.++|++..+|+++|.+|.. +|++++|+ ..|+++++++|++. .+...++.+...+++.
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~----~g~~~~A~-------~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~ 148 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIA----AWKLDEAE-------EDLKLLLRNHPAAASVVAREMKIVTERRAEK 148 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHH----HhcHHHHH-------HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 99999999 89999999999999 6788888887776654
No 147
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.47 E-value=1.2e-14 Score=152.47 Aligned_cols=122 Identities=16% Similarity=0.095 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010976 156 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQAT 235 (496)
Q Consensus 156 ~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~ 235 (496)
+.+++++|.++...|+ +++|++.|+++++++|++..+++++|.+|.. +|++++|+
T Consensus 6 a~~~~~lg~~~~~~g~--------------~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~----~g~~~~A~------- 60 (477)
T 1wao_1 6 AEELKTQANDYFKAKD--------------YENAIKFYSQAIELNPSNAIYYGNRSLAYLR----TECYGYAL------- 60 (477)
T ss_dssp HTTSSSSSSSTTTTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-------
T ss_pred HHHHHHHHHHHHHhCC--------------HHHHHHHHHHHHHhCCccHHHHHHHHHHHHH----hcCHHHHH-------
Confidence 3445666777777777 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHH--HHHcchhHHh
Q 010976 236 KNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTV--LYGLAEDTLR 312 (496)
Q Consensus 236 ~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~--~~~~g~~~~a 312 (496)
..|+++++++|+++.+++++|.+|..+|++ ++|+..|+++++++|++..++.+++.+ +...|+...+
T Consensus 61 ~~~~~al~l~p~~~~~~~~lg~~~~~~g~~----------~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A 129 (477)
T 1wao_1 61 GDATRAIELDKKYIKGYYRRAASNMALGKF----------RAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERA 129 (477)
T ss_dssp HHHHHHHHSCTTCHHHHHHHHHHHHHHTCH----------HHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999 999999999999999999999999999 7777764433
No 148
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.47 E-value=6.8e-13 Score=113.16 Aligned_cols=107 Identities=16% Similarity=0.155 Sum_probs=101.0
Q ss_pred HhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHH
Q 010976 198 RLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRT 277 (496)
Q Consensus 198 ~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~ 277 (496)
..+|.++..++.+|.++.. .|++++|+ ..|++++.++|+++.+++++|.++..+|++ ++
T Consensus 3 ~~~~~~~~~~~~~g~~~~~----~~~~~~A~-------~~~~~al~~~~~~~~~~~~l~~~~~~~~~~----------~~ 61 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFV----GRKYPEAA-------ACYGRAITRNPLVAVYYTNRALCYLKMQQP----------EQ 61 (137)
T ss_dssp ---CCCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HH
T ss_pred CCccccHHHHHHHHHHHHH----hCcHHHHH-------HHHHHHHhhCcCcHHHHHHHHHHHHHhcCH----------HH
Confidence 4578899999999999999 99999999 899999999999999999999999999999 99
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCc
Q 010976 278 AISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 344 (496)
Q Consensus 278 Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~ 344 (496)
|+..|+++++++|+++.+++++|.++..+|+ +..|..+|.+++.++|+
T Consensus 62 A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~-------------------~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 62 ALADCRRALELDGQSVKAHFFLGQCQLEMES-------------------YDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCchhHHHHHHHHHHHHHHhh-------------------HHHHHHHHHHHHHHChh
Confidence 9999999999999999999999999999999 89999999999999887
No 149
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.47 E-value=2e-14 Score=144.04 Aligned_cols=148 Identities=20% Similarity=0.095 Sum_probs=97.9
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCH-----------------HHHH
Q 010976 146 ANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLH-----------------DAFY 208 (496)
Q Consensus 146 ~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~-----------------~a~~ 208 (496)
...+...+..+..++.+|.+++..|+ |++|+..|++++.++|++. .+|+
T Consensus 169 ~~~~~~~~~~a~~~~~~g~~~~~~g~--------------~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~ 234 (338)
T 2if4_A 169 DMTVEERIGAADRRKMDGNSLFKEEK--------------LEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHL 234 (338)
T ss_dssp BCCHHHHHHHHHHHHHHHHHTCSSSC--------------CHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhcCC--------------HHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHH
Confidence 33334445567889999999999999 9999999999999999987 4999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHh
Q 010976 209 NWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 288 (496)
Q Consensus 209 ~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l 288 (496)
++|.+|.. +|++++|+ .+|+++++++|++..+|+++|.+|..+|++ ++|+.+|++++++
T Consensus 235 nla~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~a~~~lg~a~~~~g~~----------~~A~~~l~~al~l 293 (338)
T 2if4_A 235 NIAACLIK----LKRYDEAI-------GHCNIVLTEEEKNPKALFRRGKAKAELGQM----------DSARDDFRKAQKY 293 (338)
T ss_dssp HHHHHHHT----TTCCHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHTTTCH----------HHHHHHHHHTTC-
T ss_pred HHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHH
Confidence 99999999 99999999 899999999999999999999999999999 9999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHH
Q 010976 289 QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 346 (496)
Q Consensus 289 ~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~ 346 (496)
+|++..++.+|+.+....... +..+...|.+++...|.+.
T Consensus 294 ~p~~~~a~~~L~~l~~~~~~~------------------~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 294 APDDKAIRRELRALAEQEKAL------------------YQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp ----------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHhhCCCCCCC
Confidence 999999999999886544431 4556667888888888765
No 150
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.47 E-value=7e-14 Score=146.72 Aligned_cols=132 Identities=18% Similarity=0.182 Sum_probs=117.2
Q ss_pred hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHH
Q 010976 129 EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFY 208 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~ 208 (496)
+..+..+|++++|+..|+++++++|+++.+++++|.+|..+|+ +++|++.|+++++++|+++.+++
T Consensus 13 g~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~al~l~p~~~~~~~ 78 (477)
T 1wao_1 13 ANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTEC--------------YGYALGDATRAIELDKKYIKGYY 78 (477)
T ss_dssp SSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHSCTTCHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcC--------------HHHHHHHHHHHHHhCCCCHHHHH
Confidence 3446678999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH--HHHccCcchHHHhhhhHHHHHHHHH---
Q 010976 209 NWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA--LQELSAIVPAREKQTIVRTAISKFR--- 283 (496)
Q Consensus 209 ~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~--l~~~g~~~~A~~~~~~~~~Ai~~~~--- 283 (496)
++|.+|.. +|++++|+ ..|+++++++|++..++.+++.+ +...|++ ++|+..|+
T Consensus 79 ~lg~~~~~----~g~~~eA~-------~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~----------~~A~~~~~~~~ 137 (477)
T 1wao_1 79 RRAASNMA----LGKFRAAL-------RDYETVVKVKPHDKDAKMKYQECNKIVKQKAF----------ERAIAGDEHKR 137 (477)
T ss_dssp HHHHHHHH----HTCHHHHH-------HHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHH----------CCC------CC
T ss_pred HHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH----------HHHhccccccc
Confidence 99999999 99999999 89999999999999999999999 8888888 99999999
Q ss_pred --------HHHHhcCCCHHH
Q 010976 284 --------AAIQLQFDFHRA 295 (496)
Q Consensus 284 --------~Al~l~P~~~~a 295 (496)
+++.++|++..+
T Consensus 138 ~~~~~~~~~al~~~~~~~~~ 157 (477)
T 1wao_1 138 SVVDSLDIESMTIEDEYSGP 157 (477)
T ss_dssp STTTCCTTSSCCCCTTCCSC
T ss_pred hhHhhhhhhhcccccccccc
Confidence 888888765433
No 151
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.47 E-value=9.9e-13 Score=131.02 Aligned_cols=175 Identities=11% Similarity=0.016 Sum_probs=147.2
Q ss_pred HHHHHHHHHHhhccchh----------hhHhhc-cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh-c-CCCCCCCCCc
Q 010976 114 NNAAMELINSVTGVDEE----------GRSRQR-ILTFAAKRYANAIERNPEDYDALYNWALVLQES-A-DNVSLDSTSP 180 (496)
Q Consensus 114 ~~~A~~~~~~~l~~~~~----------~~~~~g-~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~-~-~~~~~~~~~~ 180 (496)
.++|+.++.+++..+.. .....+ .+++++..+.++|..+|++..+|+.++.++..+ + +
T Consensus 70 se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~--------- 140 (349)
T 3q7a_A 70 SERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQD--------- 140 (349)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSC---------
T ss_pred CHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCC---------
Confidence 35678888888877732 233456 599999999999999999999999999999998 7 7
Q ss_pred chhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 010976 181 SKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKE-AEELWKQATKNYEKAVQLNWNSPQALNNWGLAL 259 (496)
Q Consensus 181 ~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~e-A~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l 259 (496)
++++++++.++++++|.+..+|+.++.++.. .|+++. ..+.+.++++++.++++.+|.|..+|++++.++
T Consensus 141 -----~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~----l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL 211 (349)
T 3q7a_A 141 -----PVSEIEYIHGSLLPDPKNYHTWAYLHWLYSH----FSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLR 211 (349)
T ss_dssp -----CHHHHHHHHHHTSSCTTCHHHHHHHHHHHHH----HHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred -----hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 8999999999999999999999999999988 766651 123344556999999999999999999999999
Q ss_pred HHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchh
Q 010976 260 QELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAED 309 (496)
Q Consensus 260 ~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~ 309 (496)
..++++. .....++++++++++++.++|+|..+|+++..++...|+.
T Consensus 212 ~~l~~~~---~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~Ll~~~~~~ 258 (349)
T 3q7a_A 212 VSRPGAE---TSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFLKHFSLP 258 (349)
T ss_dssp TTSTTCC---CCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred Hhccccc---cchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCC
Confidence 9998730 1122349999999999999999999999999999888764
No 152
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.46 E-value=5.8e-13 Score=122.00 Aligned_cols=112 Identities=20% Similarity=0.180 Sum_probs=106.0
Q ss_pred hhhhHhhccHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHH
Q 010976 129 EEGRSRQRILTFAAKRYANAIERNPEDY----------------DALYNWALVLQESADNVSLDSTSPSKDALLEEACKK 192 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~~~P~~~----------------~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 192 (496)
+..++..|++++|+..|++++.+.|.++ .+++++|.+|..+|+ +++|+.+
T Consensus 45 g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--------------~~~A~~~ 110 (198)
T 2fbn_A 45 GNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKD--------------YPKAIDH 110 (198)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTC--------------HHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcC--------------HHHHHHH
Confidence 3346678999999999999999999987 899999999999999 9999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCc
Q 010976 193 YDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 265 (496)
Q Consensus 193 ~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 265 (496)
|++++.++|++..+++++|.+|.. +|++++|+ ..|+++++++|++..++.+++.++..+++.
T Consensus 111 ~~~al~~~p~~~~~~~~lg~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 172 (198)
T 2fbn_A 111 ASKVLKIDKNNVKALYKLGVANMY----FGFLEEAK-------ENLYKAASLNPNNLDIRNSYELCVNKLKEA 172 (198)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHH----HTCHHHHH-------HHHHHHHHHSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHH----cccHHHHH-------HHHHHHHHHCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 99999999 899999999999999999999999999887
No 153
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.46 E-value=1.4e-12 Score=109.97 Aligned_cols=116 Identities=14% Similarity=0.034 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 010976 157 DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLH---DAFYNWAIAISDRAKMRGRTKEAEELWKQ 233 (496)
Q Consensus 157 ~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~---~a~~~lg~~~~~~~~~~g~~~eA~~~~~~ 233 (496)
++++.+|.++...|+ +++|+..|+++++.+|++. .+++++|.++.. +|++++|+
T Consensus 3 ~~~~~~a~~~~~~~~--------------~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~----~~~~~~A~----- 59 (129)
T 2xev_A 3 RTAYNVAFDALKNGK--------------YDDASQLFLSFLELYPNGVYTPNALYWLGESYYA----TRNFQLAE----- 59 (129)
T ss_dssp CCHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH----TTCHHHHH-----
T ss_pred HHHHHHHHHHHHhCC--------------HHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH----hccHHHHH-----
Confidence 457899999999999 9999999999999999988 899999999999 99999999
Q ss_pred HHHHHHHHHhcCCCC---HHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcc
Q 010976 234 ATKNYEKAVQLNWNS---PQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLA 307 (496)
Q Consensus 234 A~~~~~~Al~l~P~~---~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g 307 (496)
..|++++..+|++ +.+++++|.++..+|++ ++|+..|+++++..|++..+...+..+....+
T Consensus 60 --~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~ 124 (129)
T 2xev_A 60 --AQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN----------TEAQQTLQQVATQYPGSDAARVAQERLQSIRL 124 (129)
T ss_dssp --HHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC-
T ss_pred --HHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHHCCCChHHHHHHHHHHHHHh
Confidence 8999999999999 99999999999999999 99999999999999999988776666554444
No 154
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.45 E-value=5.1e-13 Score=121.61 Aligned_cols=162 Identities=9% Similarity=0.034 Sum_probs=128.1
Q ss_pred HhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh------CCCCHHH
Q 010976 133 SRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL------CPTLHDA 206 (496)
Q Consensus 133 ~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l------~P~~~~a 206 (496)
...|++++|...++......+....++..+|.++...|+ +++|+.+|++++.+ .+....+
T Consensus 3 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~ 68 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLAHPATASGARFMLGYVYAFMDR--------------FDEARASFQALQQQAQKSGDHTAEHRA 68 (203)
T ss_dssp ----CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred cccccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCc--------------HHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 346899999996655544333678999999999999999 99999999999994 4556788
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHH
Q 010976 207 FYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNW-NSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAA 285 (496)
Q Consensus 207 ~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P-~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~A 285 (496)
++++|.++.. +|++++|+..|++|+..+++. ..++ ....+++++|.++..+|++ ++|+..|+++
T Consensus 69 ~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~~~~~g~~----------~~A~~~~~~a 133 (203)
T 3gw4_A 69 LHQVGMVERM----AGNWDAARRCFLEERELLASL-PEDPLAASANAYEVATVALHFGDL----------AGARQEYEKS 133 (203)
T ss_dssp HHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHTCH----------HHHHHHHHHH
T ss_pred HHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHc-CccHHHHHHHHHHHHHHHHHhCCH----------HHHHHHHHHH
Confidence 9999999999 999999997777776666521 1122 3467899999999999999 9999999999
Q ss_pred HHhcC--CC----HHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcC
Q 010976 286 IQLQF--DF----HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALK 342 (496)
Q Consensus 286 l~l~P--~~----~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~ 342 (496)
+++.+ .+ ..++.++|.++...|+ +.+|..++++++++.
T Consensus 134 l~~~~~~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 134 LVYAQQADDQVAIACAFRGLGDLAQQEKN-------------------LLEAQQHWLRARDIF 177 (203)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHH
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHCcC-------------------HHHHHHHHHHHHHHH
Confidence 98742 22 3457899999999998 888888888887763
No 155
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.45 E-value=9.5e-13 Score=122.47 Aligned_cols=143 Identities=20% Similarity=0.089 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 010976 139 TFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRA 218 (496)
Q Consensus 139 ~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~ 218 (496)
.+|+..|+++.+. .++.+++++|.+|...++ +++|+.+|+++++. +++.++++||.+|..
T Consensus 3 ~eA~~~~~~aa~~--g~~~a~~~lg~~~~~~~~--------------~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-- 62 (212)
T 3rjv_A 3 TEPGSQYQQQAEA--GDRRAQYYLADTWVSSGD--------------YQKAEYWAQKAAAQ--GDGDALALLAQLKIR-- 62 (212)
T ss_dssp -CTTHHHHHHHHT--TCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHT--TCHHHHHHHHHHTTS--
T ss_pred chHHHHHHHHHHC--CCHHHHHHHHHHHhcCCC--------------HHHHHHHHHHHHHc--CCHHHHHHHHHHHHc--
Confidence 3588899999886 799999999999999999 99999999999875 689999999999875
Q ss_pred HHcC---CHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----ccCcchHHHhhhhHHHHHHHHHHHHHhcC-
Q 010976 219 KMRG---RTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE----LSAIVPAREKQTIVRTAISKFRAAIQLQF- 290 (496)
Q Consensus 219 ~~~g---~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~----~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P- 290 (496)
.| ++++|+ .+|++++ ++.++.++++||.+|.. .+++ ++|+.+|++|++..+
T Consensus 63 --~g~~~~~~~A~-------~~~~~A~--~~g~~~a~~~Lg~~y~~g~g~~~d~----------~~A~~~~~~A~~~~~~ 121 (212)
T 3rjv_A 63 --NPQQADYPQAR-------QLAEKAV--EAGSKSGEIVLARVLVNRQAGATDV----------AHAITLLQDAARDSES 121 (212)
T ss_dssp --STTSCCHHHHH-------HHHHHHH--HTTCHHHHHHHHHHHTCGGGSSCCH----------HHHHHHHHHHTSSTTS
T ss_pred --CCCCCCHHHHH-------HHHHHHH--HCCCHHHHHHHHHHHHcCCCCccCH----------HHHHHHHHHHHHcCCC
Confidence 33 788888 6777764 45799999999999987 6677 999999999999988
Q ss_pred -CCHHHHHHHHHHHHH----cchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhc
Q 010976 291 -DFHRAIYNLGTVLYG----LAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHAL 341 (496)
Q Consensus 291 -~~~~a~~~lg~~~~~----~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l 341 (496)
+++.++++||.+|.. .++ +..|..+|+++.++
T Consensus 122 ~~~~~a~~~Lg~~y~~g~g~~~d-------------------~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 122 DAAVDAQMLLGLIYASGVHGPED-------------------DVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSCC-------------------HHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHcCCCCCCC-------------------HHHHHHHHHHHHHc
Confidence 469999999999988 444 78999999999998
No 156
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.44 E-value=2.3e-12 Score=136.55 Aligned_cols=161 Identities=14% Similarity=0.100 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-------hcCCCCCCCCCcchhhhHH-------HHHHHHHHHHH-hCCCC
Q 010976 139 TFAAKRYANAIERNPEDYDALYNWALVLQE-------SADNVSLDSTSPSKDALLE-------EACKKYDEATR-LCPTL 203 (496)
Q Consensus 139 ~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~-------~~~~~~~~~~~~~~~~~~~-------~A~~~~~~Al~-l~P~~ 203 (496)
.+++..|++++..+|.++++|+.+|..+.. .|+ ++ +|+..|++|++ ++|++
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~--------------~~~a~~~~~~A~~~~~~Al~~~~p~~ 320 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGD--------------MNNAKLFSDEAANIYERAISTLLKKN 320 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTC--------------CHHHHHHHHHHHHHHHHHTTTTCSSC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccc--------------hhhhhhhhHHHHHHHHHHHHHhCccc
Confidence 478899999999999999999999999987 677 76 99999999997 89999
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHccCcchHHHhhhhHHHHHHHH
Q 010976 204 HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP-QALNNWGLALQELSAIVPAREKQTIVRTAISKF 282 (496)
Q Consensus 204 ~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~-~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~ 282 (496)
..+|+.+|.++.. .|++++|. ..|+++++++|.++ .+|.++|.++.+.|++ ++|+..|
T Consensus 321 ~~l~~~~~~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~----------~~A~~~~ 379 (530)
T 2ooe_A 321 MLLYFAYADYEES----RMKYEKVH-------SIYNRLLAIEDIDPTLVYIQYMKFARRAEGI----------KSGRMIF 379 (530)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHSSSSCHHHHHHHHHHHHHHHHHH----------HHHHHHH
T ss_pred HHHHHHHHHHHHh----cCCHHHHH-------HHHHHHhCccccCchHHHHHHHHHHHHhcCH----------HHHHHHH
Confidence 9999999999999 99999999 89999999999986 6999999999999998 9999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHH-HHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Q 010976 283 RAAIQLQFDFHRAIYNLGTVL-YGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALR 353 (496)
Q Consensus 283 ~~Al~l~P~~~~a~~~lg~~~-~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al~ 353 (496)
++|++..|.+...+...+.+. ...|+ +..|..+|+++++..|++..+...+.
T Consensus 380 ~~Al~~~~~~~~~~~~~a~~~~~~~~~-------------------~~~A~~~~e~al~~~p~~~~~~~~~~ 432 (530)
T 2ooe_A 380 KKAREDARTRHHVYVTAALMEYYCSKD-------------------KSVAFKIFELGLKKYGDIPEYVLAYI 432 (530)
T ss_dssp HHHHTCTTCCTHHHHHHHHHHHHHTCC-------------------HHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHhccCCchHHHHHHHHHHHHHcCC-------------------hhHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 999999998888877777663 34776 78999999999999998875444433
No 157
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.44 E-value=4e-12 Score=105.32 Aligned_cols=109 Identities=30% Similarity=0.388 Sum_probs=103.0
Q ss_pred hhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHH
Q 010976 130 EGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYN 209 (496)
Q Consensus 130 ~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~ 209 (496)
..+...|++++|+..|++++..+|++..+++.+|.++...|+ +++|+..|++++.++|.+..++++
T Consensus 17 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~ 82 (125)
T 1na0_A 17 NAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGD--------------YDEAIEYYQKALELDPNNAEAWYN 82 (125)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCC--------------HHHHHHHHHHHHHhCCccHHHHHH
Confidence 345668999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc
Q 010976 210 WAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELS 263 (496)
Q Consensus 210 lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g 263 (496)
+|.++.. .|++++|+ ..|+++++++|++..++.++|.++...|
T Consensus 83 la~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 83 LGNAYYK----QGDYDEAI-------EYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHH----hcCHHHHH-------HHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 9999999 99999999 8999999999999999999999988765
No 158
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.44 E-value=8.3e-12 Score=130.85 Aligned_cols=151 Identities=22% Similarity=0.187 Sum_probs=104.5
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh-----cCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHH
Q 010976 135 QRILTFAAKRYANAIERNPEDYDALYNWALVLQES-----ADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYN 209 (496)
Q Consensus 135 ~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~ 209 (496)
.+++++|+.+|+++++. .++.+++.+|.+|... ++ +++|+..|+++++. ++..++++
T Consensus 272 ~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~~~~g~~~~--------------~~~A~~~~~~a~~~--~~~~a~~~ 333 (490)
T 2xm6_A 272 AKEPLKALEWYRKSAEQ--GNSDGQYYLAHLYDKGAEGVAKN--------------REQAISWYTKSAEQ--GDATAQAN 333 (490)
T ss_dssp SCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHCBTTBCCC--------------HHHHHHHHHHHHHT--TCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHcCCCCCcCC--------------HHHHHHHHHHHHhc--CCHHHHHH
Confidence 45566666666665543 4555666666666555 44 66666666666554 34556666
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----ccCcchHHHhhhhHHHHHHHHHHH
Q 010976 210 WAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE----LSAIVPAREKQTIVRTAISKFRAA 285 (496)
Q Consensus 210 lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~----~g~~~~A~~~~~~~~~Ai~~~~~A 285 (496)
+|.+|.. .|. .+.+++|+.+|+++++. +++.+++++|.+|.. .+++ ++|+.+|++|
T Consensus 334 lg~~y~~----~g~----~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~----------~~A~~~~~~A 393 (490)
T 2xm6_A 334 LGAIYFR----LGS----EEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDE----------QQAAIWMRKA 393 (490)
T ss_dssp HHHHHHH----SCC----HHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH----------HHHHHHHHHH
T ss_pred HHHHHHh----CCC----cccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCH----------HHHHHHHHHH
Confidence 6666655 441 11233444777777766 578888888888888 6777 9999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHH----cchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCc
Q 010976 286 IQLQFDFHRAIYNLGTVLYG----LAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPS 344 (496)
Q Consensus 286 l~l~P~~~~a~~~lg~~~~~----~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~ 344 (496)
++. +++.++++||.+|.. .++ +.+|..+|++++..+|+
T Consensus 394 ~~~--~~~~a~~~Lg~~y~~g~g~~~d-------------------~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 394 AEQ--GLSAAQVQLGEIYYYGLGVERD-------------------YVQAWAWFDTASTNDMN 435 (490)
T ss_dssp HHT--TCHHHHHHHHHHHHHTSSSCCC-------------------HHHHHHHHHHHHHHHCC
T ss_pred HhC--CCHHHHHHHHHHHHcCCCCCCC-------------------HHHHHHHHHHHHHCCCC
Confidence 875 468899999999987 565 78999999999999855
No 159
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.44 E-value=4.2e-12 Score=104.23 Aligned_cols=104 Identities=19% Similarity=0.186 Sum_probs=99.2
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 210 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~l 210 (496)
.+...|++++|+..|++++..+|+++.+++.+|.++...|+ +++|+..|++++.++|++..+++++
T Consensus 13 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~~ 78 (118)
T 1elw_A 13 KALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGD--------------YQKAYEDGCKTVDLKPDWGKGYSRK 78 (118)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhcc--------------HHHHHHHHHHHHHhCcccHHHHHHH
Confidence 35568999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 010976 211 AIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLAL 259 (496)
Q Consensus 211 g~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l 259 (496)
|.++.. +|++++|+ ..|+++++++|++..++..++.+.
T Consensus 79 a~~~~~----~~~~~~A~-------~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 79 AAALEF----LNRFEEAK-------RTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHHHH----TTCHHHHH-------HHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHH----HhhHHHHH-------HHHHHHHHcCCCCHHHHHHHHHhh
Confidence 999999 99999999 899999999999999999998875
No 160
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.43 E-value=1.9e-12 Score=135.00 Aligned_cols=112 Identities=14% Similarity=0.102 Sum_probs=103.5
Q ss_pred hhhhHhhccHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHH
Q 010976 129 EEGRSRQRILTFAAKRYANAIERNPED---------------YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKY 193 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~~~P~~---------------~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 193 (496)
+..++.+|+|++|+..|+++++++|.+ ..+|+++|.+|..+++ +++|+.+|
T Consensus 275 G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~--------------~~~A~~~~ 340 (457)
T 1kt0_A 275 GTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLRE--------------YTKAVECC 340 (457)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcC--------------HHHHHHHH
Confidence 445677899999999999999999999 7999999999999999 99999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCc
Q 010976 194 DEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 265 (496)
Q Consensus 194 ~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 265 (496)
+++++++|++..+|+++|.+|.. +|++++|+ .+|+++++++|++..++.+++.++..++++
T Consensus 341 ~~al~~~p~~~~a~~~~g~a~~~----~g~~~~A~-------~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 401 (457)
T 1kt0_A 341 DKALGLDSANEKGLYRRGEAQLL----MNEFESAK-------GDFEKVLEVNPQNKAARLQISMCQKKAKEH 401 (457)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHTTC----CHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCccHHHHHHHHHHHHH----ccCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 99999999 899999999999999999999999999998
No 161
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.43 E-value=1.3e-12 Score=132.48 Aligned_cols=120 Identities=18% Similarity=0.151 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHHHH
Q 010976 156 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATR----------------LCPTLHDAFYNWAIAISDRAK 219 (496)
Q Consensus 156 ~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~----------------l~P~~~~a~~~lg~~~~~~~~ 219 (496)
...+..+|.+++..|+ +++|+..|+++++ ++|.+..+|+++|.+|..
T Consensus 223 a~~~~~~g~~~~~~g~--------------~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~--- 285 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQN--------------WEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK--- 285 (370)
T ss_dssp HHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHhcC--------------HHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 4668999999999999 9999999999999 788889999999999999
Q ss_pred HcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHH
Q 010976 220 MRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNL 299 (496)
Q Consensus 220 ~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~l 299 (496)
+|++++|+ .+|+++++++|+++.+++++|.+|..+|++ ++|+..|++|++++|++..++..+
T Consensus 286 -~g~~~~A~-------~~~~~al~~~p~~~~a~~~lg~~~~~~g~~----------~eA~~~l~~Al~l~P~~~~~~~~l 347 (370)
T 1ihg_A 286 -MSDWQGAV-------DSCLEALEIDPSNTKALYRRAQGWQGLKEY----------DQALADLKKAQEIAPEDKAIQAEL 347 (370)
T ss_dssp -TTCHHHHH-------HHHHHHHTTCTTCHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred -ccCHHHHH-------HHHHHHHHhCchhHHHHHHHHHHHHHccCH----------HHHHHHHHHHHHhCCCCHHHHHHH
Confidence 99999999 899999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHcchhH
Q 010976 300 GTVLYGLAEDT 310 (496)
Q Consensus 300 g~~~~~~g~~~ 310 (496)
+.++..+++..
T Consensus 348 ~~~~~~~~~~~ 358 (370)
T 1ihg_A 348 LKVKQKIKAQK 358 (370)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998743
No 162
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.43 E-value=1.4e-13 Score=137.86 Aligned_cols=131 Identities=13% Similarity=0.098 Sum_probs=84.7
Q ss_pred hhhhHhhccHHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHH
Q 010976 129 EEGRSRQRILTFAAKRYANAIERNPEDY-----------------DALYNWALVLQESADNVSLDSTSPSKDALLEEACK 191 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~~~P~~~-----------------~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 191 (496)
+..++..|+|++|+..|++++.++|++. .+|+++|.+|..+|+ +++|+.
T Consensus 186 g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~--------------~~~A~~ 251 (338)
T 2if4_A 186 GNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKR--------------YDEAIG 251 (338)
T ss_dssp HHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTC--------------CHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCC--------------HHHHHH
Confidence 3446678999999999999999999987 499999999999999 999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-ccCcchHHH
Q 010976 192 KYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE-LSAIVPARE 270 (496)
Q Consensus 192 ~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~-~g~~~~A~~ 270 (496)
+|+++++++|++..+|+++|.+|.. +|++++|+ .+|+++++++|++..++.+++.+... .+..
T Consensus 252 ~~~~al~~~p~~~~a~~~lg~a~~~----~g~~~~A~-------~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~----- 315 (338)
T 2if4_A 252 HCNIVLTEEEKNPKALFRRGKAKAE----LGQMDSAR-------DDFRKAQKYAPDDKAIRRELRALAEQEKALY----- 315 (338)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHT----TTCHHHHH-------HHHHHTTC----------------------------
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-----
Confidence 9999999999999999999999999 99999999 89999999999999999999998544 4555
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCHH
Q 010976 271 KQTIVRTAISKFRAAIQLQFDFHR 294 (496)
Q Consensus 271 ~~~~~~~Ai~~~~~Al~l~P~~~~ 294 (496)
+++...|++++...|+++.
T Consensus 316 -----~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 316 -----QKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp ------------------------
T ss_pred -----HHHHHHHHHhhCCCCCCCC
Confidence 8899999999999998754
No 163
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.41 E-value=3.8e-13 Score=112.49 Aligned_cols=106 Identities=10% Similarity=0.066 Sum_probs=92.1
Q ss_pred hccHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010976 135 QRILTFAAKRYANAIER---NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 211 (496)
Q Consensus 135 ~g~~~~Ai~~~~~al~~---~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg 211 (496)
+|++++|+.+|++++++ +|+++.+++++|.+|..+|+ +++|+..|+++++++|+++.+++++|
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~~~l~ 68 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGE--------------YRKAEAVLANGVKQFPNHQALRVFYA 68 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 68899999999999999 69999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCc
Q 010976 212 IAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 265 (496)
Q Consensus 212 ~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 265 (496)
.++.. +|++++|+ ..|+++++.+|+++........+....+.+
T Consensus 69 ~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~~~ai~~~~~~l 111 (117)
T 3k9i_A 69 MVLYN----LGRYEQGV-------ELLLKIIAETSDDETIQSYKQAILFYADKL 111 (117)
T ss_dssp HHHHH----HTCHHHHH-------HHHHHHHHHHCCCHHHHHTHHHHHHHTTCT
T ss_pred HHHHH----cCCHHHHH-------HHHHHHHHhCCCcHHHHHHHHHHHHHHHHH
Confidence 99999 99999999 899999999999988766555544444433
No 164
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.40 E-value=5.4e-13 Score=111.56 Aligned_cols=103 Identities=15% Similarity=0.116 Sum_probs=91.8
Q ss_pred hhHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 010976 184 ALLEEACKKYDEATRL---CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ 260 (496)
Q Consensus 184 ~~~~~A~~~~~~Al~l---~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~ 260 (496)
|++++|+.+|++++++ +|++..+++++|.+|.. +|++++|+ ..|+++++++|+++.+++++|.++.
T Consensus 4 g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~l~~~~~ 72 (117)
T 3k9i_A 4 GLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRT----LGEYRKAE-------AVLANGVKQFPNHQALRVFYAMVLY 72 (117)
T ss_dssp ---CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCchHHHHHHHHHHH
Confidence 4499999999999999 69999999999999999 99999999 8999999999999999999999999
Q ss_pred HccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcc
Q 010976 261 ELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLA 307 (496)
Q Consensus 261 ~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g 307 (496)
.+|++ ++|+..|++++++.|+++.+......+....+
T Consensus 73 ~~g~~----------~~A~~~~~~al~~~p~~~~~~~~~~ai~~~~~ 109 (117)
T 3k9i_A 73 NLGRY----------EQGVELLLKIIAETSDDETIQSYKQAILFYAD 109 (117)
T ss_dssp HHTCH----------HHHHHHHHHHHHHHCCCHHHHHTHHHHHHHTT
T ss_pred HcCCH----------HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHH
Confidence 99999 99999999999999999987665555544443
No 165
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.39 E-value=1.8e-11 Score=119.27 Aligned_cols=152 Identities=10% Similarity=-0.002 Sum_probs=121.9
Q ss_pred hhhhcHHHHHHHHHHhhccc----------------hhhhHhhccHHHHHHHHHHHHHhCCCC------HHHHHHHHHHH
Q 010976 109 QLAEQNNAAMELINSVTGVD----------------EEGRSRQRILTFAAKRYANAIERNPED------YDALYNWALVL 166 (496)
Q Consensus 109 ~~~~~~~~A~~~~~~~l~~~----------------~~~~~~~g~~~~Ai~~~~~al~~~P~~------~~a~~~lg~~~ 166 (496)
...+++++|+..+.+++... +..+...|++++|+.+|++++.+.+.. ..+++++|.+|
T Consensus 86 ~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y 165 (293)
T 2qfc_A 86 CKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIY 165 (293)
T ss_dssp HHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Confidence 45678888888887766533 122345689999999999999876554 67999999999
Q ss_pred HHhcCCCCCCCCCcchhhhHHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 010976 167 QESADNVSLDSTSPSKDALLEEACKKYDEAT---RLCPTLH----DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYE 239 (496)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al---~l~P~~~----~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~ 239 (496)
..+|+ +++|+.+|++++ ...|++. .+++++|.+|.. +|++++|+..|++|+....
T Consensus 166 ~~~~~--------------~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~----~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 166 AENGY--------------LKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL----DSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHTTC--------------HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHH
T ss_pred HHcCC--------------HHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHH----HhhHHHHHHHHHHHHHHHH
Confidence 99999 999999999999 4466643 689999999999 9999999977777766653
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHH-HHHHHHHHHhc
Q 010976 240 KAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTA-ISKFRAAIQLQ 289 (496)
Q Consensus 240 ~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~A-i~~~~~Al~l~ 289 (496)
. .........+++++|.+|..+|++ ++| ..+|++|+.+.
T Consensus 228 ~-~~~~~~~~~~~~~lg~~y~~~g~~----------~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 228 R-INSMALIGQLYYQRGECLRKLEYE----------EAEIEDAYKKASFFF 267 (293)
T ss_dssp H-TTBCSSHHHHHHHHHHHHHHTTCC----------HHHHHHHHHHHHHHH
T ss_pred h-cCcHHHHHHHHHHHHHHHHHcCCc----------HHHHHHHHHHHHHHH
Confidence 2 122222478999999999999999 999 78899998763
No 166
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=7e-12 Score=107.72 Aligned_cols=119 Identities=18% Similarity=0.159 Sum_probs=110.6
Q ss_pred HhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHccCcchHHHhhhh
Q 010976 198 RLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNS---PQALNNWGLALQELSAIVPAREKQTI 274 (496)
Q Consensus 198 ~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~---~~a~~~lg~~l~~~g~~~~A~~~~~~ 274 (496)
..+|.+...++.+|..+.. .|++++|+ ..|+++++++|++ ..+++++|.++..+|++
T Consensus 22 ~~~~~~~~~~~~~a~~~~~----~~~~~~A~-------~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~--------- 81 (148)
T 2dba_A 22 TPGASSVEQLRKEGNELFK----CGDYGGAL-------AAYTQALGLDATPQDQAVLHRNRAACHLKLEDY--------- 81 (148)
T ss_dssp CTTCCCHHHHHHHHHHHHT----TTCHHHHH-------HHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCH---------
T ss_pred ccchHHHHHHHHHHHHHHH----hCCHHHHH-------HHHHHHHHHcccchHHHHHHHHHHHHHHHHccH---------
Confidence 3568899999999999999 99999999 8999999999998 89999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHHHHh
Q 010976 275 VRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRL 354 (496)
Q Consensus 275 ~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al~~ 354 (496)
++|+..|+++++++|++..+++++|.++..+|+ +..|..+|++++.++|++..+...+..
T Consensus 82 -~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-------------------~~~A~~~~~~al~~~p~~~~~~~~l~~ 141 (148)
T 2dba_A 82 -DKAETEASKAIEKDGGDVKALYRRSQALEKLGR-------------------LDQAVLDLQRCVSLEPKNKVFQEALRN 141 (148)
T ss_dssp -HHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred -HHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 999999999999999999999999999999999 899999999999999999877776665
Q ss_pred hh
Q 010976 355 VR 356 (496)
Q Consensus 355 ~~ 356 (496)
+.
T Consensus 142 ~~ 143 (148)
T 2dba_A 142 IS 143 (148)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 167
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.38 E-value=1.9e-12 Score=105.45 Aligned_cols=107 Identities=19% Similarity=0.132 Sum_probs=101.6
Q ss_pred hCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHH
Q 010976 199 LCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTA 278 (496)
Q Consensus 199 l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~A 278 (496)
++|++..+++.+|.++.. .|++++|+ ..|+++++++|.+..+++++|.++..+|++ ++|
T Consensus 1 l~p~~~~~~~~~~~~~~~----~~~~~~A~-------~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~----------~~A 59 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYD----AGNYTESI-------DLFEKAIQLDPEESKYWLMKGKALYNLERY----------EEA 59 (112)
T ss_dssp CCCSSTTGGGGHHHHHHS----SCCHHHHH-------HHHHHHHHHCCCCHHHHHHHHHHHHHTTCH----------HHH
T ss_pred CCCCcHHHHHHHHHHHHH----hhhHHHHH-------HHHHHHHHhCcCCHHHHHHHHHHHHHccCH----------HHH
Confidence 478899999999999999 99999999 899999999999999999999999999999 999
Q ss_pred HHHHHHHHHhcCC--CHHHHHHHHHHHHHc-chhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcH
Q 010976 279 ISKFRAAIQLQFD--FHRAIYNLGTVLYGL-AEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSY 345 (496)
Q Consensus 279 i~~~~~Al~l~P~--~~~a~~~lg~~~~~~-g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~ 345 (496)
+..|+++++++|+ +..+++++|.++..+ |+ +.+|..++.+++...|..
T Consensus 60 ~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~-------------------~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 60 VDCYNYVINVIEDEYNKDVWAAKADALRYIEGK-------------------EVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSSC-------------------SHHHHHHHHHHGGGCCCC
T ss_pred HHHHHHHHHhCcccchHHHHHHHHHHHHHHhCC-------------------HHHHHHHHHHHhhcccCC
Confidence 9999999999999 999999999999999 98 889999999999988864
No 168
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.37 E-value=7.2e-11 Score=123.67 Aligned_cols=153 Identities=20% Similarity=0.208 Sum_probs=106.3
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010976 135 QRILTFAAKRYANAIERNPEDYDALYNWALVLQE----SADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNW 210 (496)
Q Consensus 135 ~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~----~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~l 210 (496)
.+++++|+.+|+++++. .++.+++++|.+|.. .++ +++|+.+|+++++. ++..+++++
T Consensus 236 ~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~g~~~~~d--------------~~~A~~~~~~a~~~--~~~~a~~~L 297 (490)
T 2xm6_A 236 TQDYTQSRVLFSQSAEQ--GNSIAQFRLGYILEQGLAGAKE--------------PLKALEWYRKSAEQ--GNSDGQYYL 297 (490)
T ss_dssp CCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHTTTSSCC--------------HHHHHHHHHHHHTT--TCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHCCCCCCCC--------------HHHHHHHHHHHHHc--CCHHHHHHH
Confidence 35566666666666543 455666666666665 455 77777777777654 566777777
Q ss_pred HHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHH
Q 010976 211 AIAISDRAKMR-----GRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAA 285 (496)
Q Consensus 211 g~~~~~~~~~~-----g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~A 285 (496)
|.+|.. . +++++|+ ..|+++++. .++.+++++|.+|...|. .+++++|+.+|+++
T Consensus 298 g~~y~~----~~~g~~~~~~~A~-------~~~~~a~~~--~~~~a~~~lg~~y~~~g~-------~~~~~~A~~~~~~a 357 (490)
T 2xm6_A 298 AHLYDK----GAEGVAKNREQAI-------SWYTKSAEQ--GDATAQANLGAIYFRLGS-------EEEHKKAVEWFRKA 357 (490)
T ss_dssp HHHHHH----CBTTBCCCHHHHH-------HHHHHHHHT--TCHHHHHHHHHHHHHSCC-------HHHHHHHHHHHHHH
T ss_pred HHHHHc----CCCCCcCCHHHHH-------HHHHHHHhc--CCHHHHHHHHHHHHhCCC-------cccHHHHHHHHHHH
Confidence 777766 6 6777777 566666554 467778888888777652 12448999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHH----cchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHH
Q 010976 286 IQLQFDFHRAIYNLGTVLYG----LAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS 346 (496)
Q Consensus 286 l~l~P~~~~a~~~lg~~~~~----~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~ 346 (496)
++. +++.++++||.+|.. .++ +.+|..+|+++.+......
T Consensus 358 ~~~--~~~~a~~~Lg~~y~~g~g~~~~-------------------~~~A~~~~~~A~~~~~~~a 401 (490)
T 2xm6_A 358 AAK--GEKAAQFNLGNALLQGKGVKKD-------------------EQQAAIWMRKAAEQGLSAA 401 (490)
T ss_dssp HHT--TCHHHHHHHHHHHHHTSSSCCC-------------------HHHHHHHHHHHHHTTCHHH
T ss_pred HHC--CCHHHHHHHHHHHHcCCCCCCC-------------------HHHHHHHHHHHHhCCCHHH
Confidence 887 678999999999887 555 7888888888888754433
No 169
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.36 E-value=2e-11 Score=102.80 Aligned_cols=110 Identities=13% Similarity=0.095 Sum_probs=98.6
Q ss_pred hhhHhhccHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC---
Q 010976 130 EGRSRQRILTFAAKRYANAIERNPEDY---DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL--- 203 (496)
Q Consensus 130 ~~~~~~g~~~~Ai~~~~~al~~~P~~~---~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~--- 203 (496)
..+...|++++|+..|+++++.+|++. .+++.+|.++...|+ +++|+..|++++..+|++
T Consensus 10 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~--------------~~~A~~~~~~~~~~~p~~~~~ 75 (129)
T 2xev_A 10 FDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRN--------------FQLAEAQFRDLVSRYPTHDKA 75 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTSTTH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhcc--------------HHHHHHHHHHHHHHCCCCccc
Confidence 345668999999999999999999998 899999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccC
Q 010976 204 HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSA 264 (496)
Q Consensus 204 ~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~ 264 (496)
+.+++++|.++.. +|++++|+ ..|++++..+|++..+...+..+-...++
T Consensus 76 ~~~~~~la~~~~~----~g~~~~A~-------~~~~~~~~~~p~~~~~~~a~~~l~~l~~~ 125 (129)
T 2xev_A 76 AGGLLKLGLSQYG----EGKNTEAQ-------QTLQQVATQYPGSDAARVAQERLQSIRLG 125 (129)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTSHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHHCCCChHHHHHHHHHHHHHhh
Confidence 8999999999999 99999999 89999999999999887776666554444
No 170
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.35 E-value=1.6e-11 Score=123.36 Aligned_cols=164 Identities=11% Similarity=-0.025 Sum_probs=137.1
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC--
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDY-----DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL-- 203 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~-----~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~-- 203 (496)
.....|++++|+..+++++...|.+. .++..+|.++...|+ +++|+..|++++.+.|..
T Consensus 23 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~al~~~~~~~~ 88 (373)
T 1hz4_A 23 VAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGE--------------LTRSLALMQQTEQMARQHDV 88 (373)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCc--------------HHHHHHHHHHHHHHHHhcCc
Confidence 35567999999999999999987653 368899999999999 999999999999986543
Q ss_pred ----HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHH
Q 010976 204 ----HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL-NWNSPQALNNWGLALQELSAIVPAREKQTIVRTA 278 (496)
Q Consensus 204 ----~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l-~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~A 278 (496)
..+++++|.++.. +|++++|+..|++++..+.+.-.. .|....++.++|.++...|++ ++|
T Consensus 89 ~~~~~~~~~~la~~~~~----~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~----------~~A 154 (373)
T 1hz4_A 89 WHYALWSLIQQSEILFA----QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARL----------DEA 154 (373)
T ss_dssp HHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCH----------HHH
T ss_pred HHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCH----------HHH
Confidence 2447899999999 999999997777777666543211 144567889999999999999 999
Q ss_pred HHHHHHHHHhcCC-----CHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhc
Q 010976 279 ISKFRAAIQLQFD-----FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHAL 341 (496)
Q Consensus 279 i~~~~~Al~l~P~-----~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l 341 (496)
+..|++++.+.+. ...++.++|.++...|+ +.+|..++++++.+
T Consensus 155 ~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~-------------------~~~A~~~l~~a~~~ 203 (373)
T 1hz4_A 155 EASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGD-------------------LDNARSQLNRLENL 203 (373)
T ss_dssp HHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHHH
Confidence 9999999998775 35689999999999999 88888899888776
No 171
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.35 E-value=3.4e-11 Score=125.28 Aligned_cols=158 Identities=15% Similarity=0.121 Sum_probs=124.6
Q ss_pred hHhhc---cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh----cCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCH
Q 010976 132 RSRQR---ILTFAAKRYANAIERNPEDYDALYNWALVLQES----ADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLH 204 (496)
Q Consensus 132 ~~~~g---~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~ 204 (496)
+...| ++++|+..|+++++..|..+..++++|.+|... ++ +++|+.+|+++. |+++
T Consensus 186 ~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d--------------~~~A~~~~~~aa---~g~~ 248 (452)
T 3e4b_A 186 YQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPD--------------EKTAQALLEKIA---PGYP 248 (452)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCC--------------HHHHHHHHHHHG---GGST
T ss_pred HHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCC--------------HHHHHHHHHHHc---CCCH
Confidence 33456 999999999999999999999999999999654 45 999999999997 8999
Q ss_pred HHHHHHHHHHH---HHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc-----CcchHHHhhhhHH
Q 010976 205 DAFYNWAIAIS---DRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELS-----AIVPAREKQTIVR 276 (496)
Q Consensus 205 ~a~~~lg~~~~---~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g-----~~~~A~~~~~~~~ 276 (496)
.++++||.+|. . .+++++|+ .+|+++++. +++.++++||.+|. .| ++ +
T Consensus 249 ~a~~~Lg~~~~~~~~----~~d~~~A~-------~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~----------~ 304 (452)
T 3e4b_A 249 ASWVSLAQLLYDFPE----LGDVEQMM-------KYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADA----------K 304 (452)
T ss_dssp HHHHHHHHHHHHSGG----GCCHHHHH-------HHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCH----------H
T ss_pred HHHHHHHHHHHhCCC----CCCHHHHH-------HHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCH----------H
Confidence 99999999844 4 78888888 677777654 58999999999998 55 66 9
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHH
Q 010976 277 TAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVY 348 (496)
Q Consensus 277 ~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y 348 (496)
+|+.+|++|+ ++++.++++||.+|.. |.. ... .+.+|..+|+++.+.......+
T Consensus 305 ~A~~~~~~Aa---~g~~~A~~~Lg~~y~~-G~g-----~~~---------d~~~A~~~~~~Aa~~g~~~A~~ 358 (452)
T 3e4b_A 305 AAEAHFEKAV---GREVAADYYLGQIYRR-GYL-----GKV---------YPQKALDHLLTAARNGQNSADF 358 (452)
T ss_dssp HHHHHHHTTT---TTCHHHHHHHHHHHHT-TTT-----SSC---------CHHHHHHHHHHHHTTTCTTHHH
T ss_pred HHHHHHHHHh---CCCHHHHHHHHHHHHC-CCC-----CCc---------CHHHHHHHHHHHHhhChHHHHH
Confidence 9999999998 8899999999988876 320 000 1567777777777655444433
No 172
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.35 E-value=6e-12 Score=122.75 Aligned_cols=150 Identities=10% Similarity=-0.010 Sum_probs=118.0
Q ss_pred hhhcHHHHHHHHHHhhccc----------------hhhhHhhccHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHH
Q 010976 110 LAEQNNAAMELINSVTGVD----------------EEGRSRQRILTFAAKRYANAIERNPED------YDALYNWALVLQ 167 (496)
Q Consensus 110 ~~~~~~~A~~~~~~~l~~~----------------~~~~~~~g~~~~Ai~~~~~al~~~P~~------~~a~~~lg~~~~ 167 (496)
..++++.|...+.+++... +..+...+++++|+.+|++++.+.+.. ..++.++|.+|.
T Consensus 87 ~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 166 (293)
T 3u3w_A 87 KQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA 166 (293)
T ss_dssp HTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Confidence 4678888888888876633 122334579999999999999975443 347999999999
Q ss_pred HhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 010976 168 ESADNVSLDSTSPSKDALLEEACKKYDEATRL-------CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEK 240 (496)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l-------~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~ 240 (496)
.+|+ +++|+.+|++++++ .+....+++++|.+|.. +|++++|++.+++|+....+
T Consensus 167 ~~g~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~----~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 167 ENGY--------------LKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL----DSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HTTC--------------HHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHH
T ss_pred HcCC--------------HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH----HhHHHHHHHHHHHHHHHHHH
Confidence 9999 99999999999964 22345689999999999 99999999666666555433
Q ss_pred HHhcCCCCHHHHHHHHHHHHHcc-CcchHHHhhhhHHHHHHHHHHHHHh
Q 010976 241 AVQLNWNSPQALNNWGLALQELS-AIVPAREKQTIVRTAISKFRAAIQL 288 (496)
Q Consensus 241 Al~l~P~~~~a~~~lg~~l~~~g-~~~~A~~~~~~~~~Ai~~~~~Al~l 288 (496)
. ...+....+++++|.++..+| .+ ++|+.+|++|+.+
T Consensus 229 ~-~~~~~~~~~~~~lg~~~~~~g~~~----------~~A~~~~~~Al~i 266 (293)
T 3u3w_A 229 I-NSMALIGQLYYQRGECLRKLEYEE----------AEIEDAYKKASFF 266 (293)
T ss_dssp T-TBCTTHHHHHHHHHHHHHHTTCCH----------HHHHHHHHHHHHH
T ss_pred c-CcHHHHHHHHHHHHHHHHHhCCcH----------HHHHHHHHHHHHH
Confidence 1 112333889999999999999 57 9999999999976
No 173
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.34 E-value=5.8e-12 Score=127.64 Aligned_cols=112 Identities=16% Similarity=0.138 Sum_probs=106.7
Q ss_pred hhhhHhhccHHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHH
Q 010976 129 EEGRSRQRILTFAAKRYANAIE----------------RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKK 192 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~----------------~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 192 (496)
+..++..|++++|+..|+++++ ++|.+..+|+++|.+|..+++ +++|+.+
T Consensus 230 g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~--------------~~~A~~~ 295 (370)
T 1ihg_A 230 GNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSD--------------WQGAVDS 295 (370)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTC--------------HHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccC--------------HHHHHHH
Confidence 4456778999999999999999 788889999999999999999 9999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCc
Q 010976 193 YDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 265 (496)
Q Consensus 193 ~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 265 (496)
|+++++++|++..+++++|.+|.. +|++++|+ ..|+++++++|++..++..++.++..++++
T Consensus 296 ~~~al~~~p~~~~a~~~lg~~~~~----~g~~~eA~-------~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~ 357 (370)
T 1ihg_A 296 CLEALEIDPSNTKALYRRAQGWQG----LKEYDQAL-------ADLKKAQEIAPEDKAIQAELLKVKQKIKAQ 357 (370)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCchhHHHHHHHHHHHHH----ccCHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 99999999 899999999999999999999999999988
No 174
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.33 E-value=5.6e-11 Score=119.32 Aligned_cols=168 Identities=14% Similarity=0.026 Sum_probs=115.3
Q ss_pred hhhhhcHHHHHHHHHHhhccc----------------hhhhHhhccHHHHHHHHHHHHHhC--------CCCHHHHHHHH
Q 010976 108 HQLAEQNNAAMELINSVTGVD----------------EEGRSRQRILTFAAKRYANAIERN--------PEDYDALYNWA 163 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~----------------~~~~~~~g~~~~Ai~~~~~al~~~--------P~~~~a~~~lg 163 (496)
+...|+++.|...+.+++... +..+..+|++++|+.+|++++++. |....++.++|
T Consensus 63 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la 142 (373)
T 1hz4_A 63 LHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRA 142 (373)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHH
Confidence 456789999999988887643 233556799999999999999875 34567888999
Q ss_pred HHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 010976 164 LVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT-----LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNY 238 (496)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~-----~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~ 238 (496)
.++...|+ +++|+.+|++++.+.+. ...++.++|.++.. .|++++|+..+++++...
T Consensus 143 ~~~~~~g~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 143 QLLWAWAR--------------LDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLA----RGDLDNARSQLNRLENLL 204 (373)
T ss_dssp HHHHHTTC--------------HHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcC--------------HHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999875 35688999999999 999999995554444332
Q ss_pred HHHHhcCCCC-HHHHH----HHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCC----HHHHHHHHHHHHHcch
Q 010976 239 EKAVQLNWNS-PQALN----NWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDF----HRAIYNLGTVLYGLAE 308 (496)
Q Consensus 239 ~~Al~l~P~~-~~a~~----~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~----~~a~~~lg~~~~~~g~ 308 (496)
. .++. ..... .++.++...|++ ++|+..+++++...|.. ...+.++|.++...|+
T Consensus 205 ~-----~~~~~~~~~~~~~~~~~~~~~~~g~~----------~~A~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~ 268 (373)
T 1hz4_A 205 G-----NGKYHSDWISNANKVRVIYWQMTGDK----------AAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGE 268 (373)
T ss_dssp T-----TSCCCHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTC
T ss_pred h-----ccCcchhHHHHHHHHHHHHHHHCCCH----------HHHHHHHHhCCCCCCCcchhhHHHHHHHHHHHHHcCC
Confidence 1 1122 11111 234446677777 44444444444443321 3344444444444444
No 175
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.30 E-value=2.7e-11 Score=101.26 Aligned_cols=109 Identities=19% Similarity=0.203 Sum_probs=100.5
Q ss_pred hhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC-------
Q 010976 131 GRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL------- 203 (496)
Q Consensus 131 ~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~------- 203 (496)
.+...|++++|+..|++++..+|.++.+++++|.++...|+ +++|+.+|++++.++|++
T Consensus 13 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~--------------~~~A~~~~~~~~~~~~~~~~~~~~~ 78 (131)
T 1elr_A 13 DAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGD--------------YNKCRELCEKAIEVGRENREDYRQI 78 (131)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhcc--------------HHHHHHHHHHHHhhccccchhHHHH
Confidence 35668999999999999999999999999999999999999 999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCc
Q 010976 204 HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAI 265 (496)
Q Consensus 204 ~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~ 265 (496)
..+++++|.++.. .|++++|+ ..|+++++++| +...+..++.++..+++.
T Consensus 79 ~~~~~~la~~~~~----~~~~~~A~-------~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 79 AKAYARIGNSYFK----EEKYKDAI-------HFYNKSLAEHR-TPDVLKKCQQAEKILKEQ 128 (131)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCC-CHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH----hccHHHHH-------HHHHHHHHhCC-CHHHHHHHHHHHHHHHHh
Confidence 9999999999999 99999999 88899999998 689999999888776654
No 176
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.30 E-value=1.8e-11 Score=105.96 Aligned_cols=139 Identities=15% Similarity=0.087 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHcCCHHHHHH
Q 010976 156 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL------HDAFYNWAIAISDRAKMRGRTKEAEE 229 (496)
Q Consensus 156 ~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~------~~a~~~lg~~~~~~~~~~g~~~eA~~ 229 (496)
..++..+|.++...|+ +++|+.+|++++++.+.. ..+++++|.++.. +|++++|++
T Consensus 9 ~~~~~~l~~~~~~~~~--------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~ 70 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGN--------------FRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIF----LGEFETASE 70 (164)
T ss_dssp HHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----TTCHHHHHH
T ss_pred HHHHHHHHHHHHHhcC--------------HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH----cCCHHHHHH
Confidence 4678999999999999 999999999999986542 2589999999999 999999997
Q ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcC------CCHHHHHHHHHHH
Q 010976 230 LWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQF------DFHRAIYNLGTVL 303 (496)
Q Consensus 230 ~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P------~~~~a~~~lg~~~ 303 (496)
.|++|+..+... ...+....+++++|.++..+|++ ++|+..|++++++.+ ....++.++|.++
T Consensus 71 ~~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~ 139 (164)
T 3ro3_A 71 YYKKTLLLARQL-KDRAVEAQSCYSLGNTYTLLQDY----------EKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAY 139 (164)
T ss_dssp HHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHhhH----------HHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHH
Confidence 777776665542 11111367899999999999999 999999999998743 2357899999999
Q ss_pred HHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcC
Q 010976 304 YGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALK 342 (496)
Q Consensus 304 ~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~ 342 (496)
...|+ +..|..++++++++.
T Consensus 140 ~~~g~-------------------~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 140 TALGN-------------------HDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHHTC-------------------HHHHHHHHHHHHHHH
T ss_pred HHccC-------------------HHHHHHHHHHHHHHH
Confidence 99998 888999998887753
No 177
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.27 E-value=3.5e-11 Score=109.27 Aligned_cols=133 Identities=14% Similarity=0.054 Sum_probs=108.9
Q ss_pred hhhhHhhccHHHHHHHHHHHHH------hCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh---
Q 010976 129 EEGRSRQRILTFAAKRYANAIE------RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL--- 199 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~------~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l--- 199 (496)
+..+...|++++|+.+|++++. ..|....++.++|.++..+|+ +++|+.+|++++.+
T Consensus 33 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~al~~~~~ 98 (203)
T 3gw4_A 33 GYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGN--------------WDAARRCFLEERELLAS 98 (203)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHHHH
Confidence 3446678999999999999999 445667899999999999999 99999999999999
Q ss_pred CCC----CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhH
Q 010976 200 CPT----LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIV 275 (496)
Q Consensus 200 ~P~----~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~ 275 (496)
.++ ...+++++|.++.. +|++++|+..+++|+...+..- .......++.++|.++..+|++
T Consensus 99 ~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~la~~~~~~g~~---------- 163 (203)
T 3gw4_A 99 LPEDPLAASANAYEVATVALH----FGDLAGARQEYEKSLVYAQQAD-DQVAIACAFRGLGDLAQQEKNL---------- 163 (203)
T ss_dssp SCCCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCH----------
T ss_pred cCccHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHCcCH----------
Confidence 443 35679999999999 9999999977777766644310 0011245679999999999999
Q ss_pred HHHHHHHHHHHHhcC
Q 010976 276 RTAISKFRAAIQLQF 290 (496)
Q Consensus 276 ~~Ai~~~~~Al~l~P 290 (496)
++|+..|++++++..
T Consensus 164 ~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 164 LEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998743
No 178
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.26 E-value=5.7e-11 Score=98.49 Aligned_cols=100 Identities=11% Similarity=0.051 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcch
Q 010976 188 EACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVP 267 (496)
Q Consensus 188 ~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~ 267 (496)
+|+..|+++++++|+++.+++++|.+|.. .|++++|+ ..|+++++++|++..+++++|.+|..+|++
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~~~~~la~~~~~~g~~-- 69 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAE----HEQFDAAL-------PHLRAALDFDPTYSVAWKWLGKTLQGQGDR-- 69 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHHTCH--
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHH----ccCHHHHH-------HHHHHHHHHCCCcHHHHHHHHHHHHHcCCH--
Confidence 58899999999999999999999999999 99999999 899999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHcch
Q 010976 268 AREKQTIVRTAISKFRAAIQLQFD--FHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 268 A~~~~~~~~~Ai~~~~~Al~l~P~--~~~a~~~lg~~~~~~g~ 308 (496)
++|+..|+++++++|+ +......+...+..+++
T Consensus 70 --------~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~~l~~ 104 (115)
T 2kat_A 70 --------AGARQAWESGLAAAQSRGDQQVVKELQVFLRRLAR 104 (115)
T ss_dssp --------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHhccccccHHHHHHHHHHHHHhcc
Confidence 9999999999999884 56677777777777765
No 179
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.25 E-value=1.8e-11 Score=118.18 Aligned_cols=134 Identities=13% Similarity=0.018 Sum_probs=117.4
Q ss_pred hHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCC-C-HHHHHH
Q 010976 132 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT-L-HDAFYN 209 (496)
Q Consensus 132 ~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~-~-~~a~~~ 209 (496)
+...|+|++|.+.|+.++...|++. +++.+|.++++.++ |++|+..|++++...+. . ..++++
T Consensus 112 L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r--------------~~dA~~~l~~a~~~~d~~~~~~a~~~ 176 (282)
T 4f3v_A 112 EAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAER--------------WTDVIDQVKSAGKWPDKFLAGAAGVA 176 (282)
T ss_dssp HHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTC--------------HHHHHHHHTTGGGCSCHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCC--------------HHHHHHHHHHhhccCCcccHHHHHHH
Confidence 5567999999999999999999999 99999999999999 99999999988776322 2 458999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcC--CC-CHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHH
Q 010976 210 WAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN--WN-SPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAI 286 (496)
Q Consensus 210 lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~--P~-~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al 286 (496)
+|.++.. +|++++|+ .+|++++.-. |. .+.+++++|.++.++|+. ++|+..|++++
T Consensus 177 LG~al~~----LG~~~eAl-------~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~----------deA~~~l~~a~ 235 (282)
T 4f3v_A 177 HGVAAAN----LALFTEAE-------RRLTEANDSPAGEACARAIAWYLAMARRSQGNE----------SAAVALLEWLQ 235 (282)
T ss_dssp HHHHHHH----TTCHHHHH-------HHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCH----------HHHHHHHHHHH
T ss_pred HHHHHHH----CCCHHHHH-------HHHHHHhcCCCCccccHHHHHHHHHHHHHcCCH----------HHHHHHHHHHH
Confidence 9999999 99999999 7778877544 66 678999999999999999 99999999999
Q ss_pred HhcCCCHHHHHHHHHH
Q 010976 287 QLQFDFHRAIYNLGTV 302 (496)
Q Consensus 287 ~l~P~~~~a~~~lg~~ 302 (496)
..+|+ ..+...|...
T Consensus 236 a~~P~-~~~~~aL~~~ 250 (282)
T 4f3v_A 236 TTHPE-PKVAAALKDP 250 (282)
T ss_dssp HHSCC-HHHHHHHHCT
T ss_pred hcCCc-HHHHHHHhCC
Confidence 99999 7776666443
No 180
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.25 E-value=6e-11 Score=98.34 Aligned_cols=100 Identities=13% Similarity=0.191 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 010976 140 FAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAK 219 (496)
Q Consensus 140 ~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~ 219 (496)
.|+..|+++++.+|+++.+++++|.+|...|+ +++|+..|+++++++|++..+|+++|.+|..
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~~~~~la~~~~~--- 65 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQ--------------FDAALPHLRAALDFDPTYSVAWKWLGKTLQG--- 65 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccC--------------HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH---
Confidence 58899999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHccC
Q 010976 220 MRGRTKEAEELWKQATKNYEKAVQLNW--NSPQALNNWGLALQELSA 264 (496)
Q Consensus 220 ~~g~~~eA~~~~~~A~~~~~~Al~l~P--~~~~a~~~lg~~l~~~g~ 264 (496)
+|++++|+ ..|+++++++| .+..+...+...+..+++
T Consensus 66 -~g~~~~A~-------~~~~~al~~~~~~~~~~~~~~l~~~l~~l~~ 104 (115)
T 2kat_A 66 -QGDRAGAR-------QAWESGLAAAQSRGDQQVVKELQVFLRRLAR 104 (115)
T ss_dssp -HTCHHHHH-------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred -cCCHHHHH-------HHHHHHHHhccccccHHHHHHHHHHHHHhcc
Confidence 99999999 67777777666 355666666666665554
No 181
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.23 E-value=1e-11 Score=101.45 Aligned_cols=86 Identities=15% Similarity=0.159 Sum_probs=82.9
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 010976 155 DYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQA 234 (496)
Q Consensus 155 ~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A 234 (496)
++.+++.+|.++...|+ +++|+..|+++++++|+++.+++++|.++.. +|++++|+
T Consensus 3 ~~~~~~~~g~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~------ 58 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGL--------------YREAVHCYDQLITAQPQNPVGYSNKAMALIK----LGEYTQAI------ 58 (111)
T ss_dssp HHHHHHHHHHHHHTTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH------
T ss_pred hHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----hcCHHHHH------
Confidence 46789999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHhcCCCC------HHHHHHHHHHHHHccCc
Q 010976 235 TKNYEKAVQLNWNS------PQALNNWGLALQELSAI 265 (496)
Q Consensus 235 ~~~~~~Al~l~P~~------~~a~~~lg~~l~~~g~~ 265 (496)
..|+++++++|++ ..+++++|.++..+|++
T Consensus 59 -~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (111)
T 2l6j_A 59 -QMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAVGSV 94 (111)
T ss_dssp -HHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHHHCC
T ss_pred -HHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHhH
Confidence 8999999999999 99999999999999998
No 182
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.23 E-value=2.7e-10 Score=118.39 Aligned_cols=134 Identities=17% Similarity=0.105 Sum_probs=107.4
Q ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 010976 137 ILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISD 216 (496)
Q Consensus 137 ~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~ 216 (496)
..+.+..+++.+...+|. +++++|.+|...|. ..++++|+..|++++...|..+..++++|.+|..
T Consensus 160 ~~~~a~~~~~~a~~~~~~---a~~~Lg~~~~~~g~-----------~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~ 225 (452)
T 3e4b_A 160 HLDDVERICKAALNTTDI---CYVELATVYQKKQQ-----------PEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGD 225 (452)
T ss_dssp GHHHHHHHHHHHTTTCTT---HHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHcCCHH---HHHHHHHHHHHcCC-----------cccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 455566666666655554 89999999999881 1129999999999999999999999999999976
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH---HccCcchHHHhhhhHHHHHHHHHHHHHhcCCCH
Q 010976 217 RAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQ---ELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH 293 (496)
Q Consensus 217 ~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~---~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~ 293 (496)
.....+++++|+ .+|+++. |+++.++++||.+|. ..+++ ++|+.+|+++++. +++
T Consensus 226 g~~~~~d~~~A~-------~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~----------~~A~~~~~~Aa~~--g~~ 283 (452)
T 3e4b_A 226 ATLGTPDEKTAQ-------ALLEKIA---PGYPASWVSLAQLLYDFPELGDV----------EQMMKYLDNGRAA--DQP 283 (452)
T ss_dssp GGGSSCCHHHHH-------HHHHHHG---GGSTHHHHHHHHHHHHSGGGCCH----------HHHHHHHHHHHHT--TCH
T ss_pred CCCCCCCHHHHH-------HHHHHHc---CCCHHHHHHHHHHHHhCCCCCCH----------HHHHHHHHHHHHC--CCH
Confidence 000016888888 7888887 899999999999944 45555 9999999999864 589
Q ss_pred HHHHHHHHHHHHcc
Q 010976 294 RAIYNLGTVLYGLA 307 (496)
Q Consensus 294 ~a~~~lg~~~~~~g 307 (496)
.++++||.+|. .|
T Consensus 284 ~A~~~Lg~~y~-~G 296 (452)
T 3e4b_A 284 RAELLLGKLYY-EG 296 (452)
T ss_dssp HHHHHHHHHHH-HC
T ss_pred HHHHHHHHHHH-cC
Confidence 99999999998 55
No 183
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.23 E-value=6.5e-10 Score=125.82 Aligned_cols=208 Identities=14% Similarity=0.018 Sum_probs=156.3
Q ss_pred ChhhhhhcHHHHHHHHHHhhccch--hhhH-hhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcch
Q 010976 106 TPHQLAEQNNAAMELINSVTGVDE--EGRS-RQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSK 182 (496)
Q Consensus 106 ~~~~~~~~~~~A~~~~~~~l~~~~--~~~~-~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~ 182 (496)
......+.+++|..+|+++-.... ..+. ..+++++|++.++++ +.+.+|+.+|.++...|+
T Consensus 1057 ~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aerv-----n~p~vWsqLAKAql~~G~----------- 1120 (1630)
T 1xi4_A 1057 NIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERC-----NEPAVWSQLAKAQLQKGM----------- 1120 (1630)
T ss_pred HHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhc-----CCHHHHHHHHHHHHhCCC-----------
Confidence 344568899999999998753331 1122 457777777777754 779999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----------------------HHHH
Q 010976 183 DALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATK----------------------NYEK 240 (496)
Q Consensus 183 ~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~----------------------~~~~ 240 (496)
+++|+.+|.+| +++..|+++|.++.. .|++++|++.|..|++ .++.
T Consensus 1121 ---~kEAIdsYiKA-----dD~say~eVa~~~~~----lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~ 1188 (1630)
T 1xi4_A 1121 ---VKEAIDSYIKA-----DDPSSYMEVVQAANT----SGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEE 1188 (1630)
T ss_pred ---HHHHHHHHHhc-----CChHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHH
Confidence 99999999887 899999999999999 9999999988876552 1111
Q ss_pred HHhcCCCCHHHHHHHHHHHHHccCcchH----------------HHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 010976 241 AVQLNWNSPQALNNWGLALQELSAIVPA----------------REKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLY 304 (496)
Q Consensus 241 Al~l~P~~~~a~~~lg~~l~~~g~~~~A----------------~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~ 304 (496)
.+ +..+...+.++|..+...|+|++| +-++|++++|++.+++| .+..+|.+.+.++.
T Consensus 1189 fI--~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA~ny~rLA~tLvkLge~q~AIEaarKA-----~n~~aWkev~~acv 1261 (1630)
T 1xi4_A 1189 FI--NGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACV 1261 (1630)
T ss_pred HH--hCCCHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHHHHHhCCHHHHHHHHHHh-----CCHHHHHHHHHHHh
Confidence 11 233456677899999999999888 23678999999999998 56688888888887
Q ss_pred HcchhHHhccCCCCCCCCCcHH------------HHHHHHHHHHHHHhcCCcHHHHH
Q 010976 305 GLAEDTLRTGGTVNPREVSPNE------------LYSQSAIYIAAAHALKPSYSVYS 349 (496)
Q Consensus 305 ~~g~~~~a~~~~~~~~~~~~~~------------~~~~A~~~~~~a~~l~p~~~~y~ 349 (496)
..|+...+....+. ....+.. .|.+|+.++++++.+++++..+.
T Consensus 1262 e~~Ef~LA~~cgl~-Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmf 1317 (1630)
T 1xi4_A 1262 DGKEFRLAQMCGLH-IVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMF 1317 (1630)
T ss_pred hhhHHHHHHHHHHh-hhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHH
Confidence 77765554433322 2222221 36789999999999999887444
No 184
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.22 E-value=7.1e-11 Score=102.11 Aligned_cols=134 Identities=12% Similarity=-0.014 Sum_probs=110.9
Q ss_pred hhhhHhhccHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCC
Q 010976 129 EEGRSRQRILTFAAKRYANAIERNPEDY------DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT 202 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~~~P~~~------~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~ 202 (496)
+..+...|++++|+.+|++++++.+... .++.++|.++..+|+ +++|+.+|++++.+.+.
T Consensus 16 ~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------~~~A~~~~~~a~~~~~~ 81 (164)
T 3ro3_A 16 GNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGE--------------FETASEYYKKTLLLARQ 81 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHHHHH
Confidence 3446678999999999999999865432 589999999999999 99999999999998655
Q ss_pred C------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHH
Q 010976 203 L------HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVR 276 (496)
Q Consensus 203 ~------~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~ 276 (496)
. ..+++++|.++.. +|++++|++.+++++..+.+. ...+....++.++|.++..+|++ +
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~~~~-~~~~~~~~~~~~la~~~~~~g~~----------~ 146 (164)
T 3ro3_A 82 LKDRAVEAQSCYSLGNTYTL----LQDYEKAIDYHLKHLAIAQEL-KDRIGEGRACWSLGNAYTALGNH----------D 146 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHTCH----------H
T ss_pred hCCcHHHHHHHHHHHHHHHH----HhhHHHHHHHHHHHHHHHHHc-cchHhHHHHHHHHHHHHHHccCH----------H
Confidence 3 6789999999999 999999997777777665432 11123467899999999999999 9
Q ss_pred HHHHHHHHHHHhcCC
Q 010976 277 TAISKFRAAIQLQFD 291 (496)
Q Consensus 277 ~Ai~~~~~Al~l~P~ 291 (496)
+|+..|++++++...
T Consensus 147 ~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 147 QAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987654
No 185
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.20 E-value=1.4e-10 Score=91.06 Aligned_cols=85 Identities=32% Similarity=0.411 Sum_probs=80.7
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 010976 154 EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQ 233 (496)
Q Consensus 154 ~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~ 233 (496)
.++.+++.+|.++...|+ +++|+..|++++.++|++..+++++|.++.. .|++++|+
T Consensus 7 ~~~~~~~~la~~~~~~~~--------------~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~----- 63 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGD--------------YDEAIEYYQKALELDPNNAEAWYNLGNAYYK----QGDYDEAI----- 63 (91)
T ss_dssp HHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHH-----
T ss_pred ccHHHHHHHHHHHHHccC--------------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----HhhHHHHH-----
Confidence 467899999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHcc
Q 010976 234 ATKNYEKAVQLNWNSPQALNNWGLALQELS 263 (496)
Q Consensus 234 A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g 263 (496)
..|+++++++|++..++.++|.++..+|
T Consensus 64 --~~~~~a~~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 64 --EYYQKALELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp --HHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHhcCCCCHHHHHHHHHHHHhcC
Confidence 8999999999999999999999998765
No 186
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.19 E-value=1.5e-10 Score=90.95 Aligned_cols=85 Identities=28% Similarity=0.325 Sum_probs=80.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHH
Q 010976 202 TLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISK 281 (496)
Q Consensus 202 ~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~ 281 (496)
.+..+++++|.++.. .|++++|+ ..|+++++++|++..+++++|.++...|++ ++|+..
T Consensus 7 ~~~~~~~~la~~~~~----~~~~~~A~-------~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~ 65 (91)
T 1na3_A 7 NSAEAWYNLGNAYYK----QGDYDEAI-------EYYQKALELDPNNAEAWYNLGNAYYKQGDY----------DEAIEY 65 (91)
T ss_dssp HHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHH
T ss_pred ccHHHHHHHHHHHHH----ccCHHHHH-------HHHHHHHhcCCCCHHHHHHHHHHHHHHhhH----------HHHHHH
Confidence 467899999999999 99999999 899999999999999999999999999999 999999
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHcc
Q 010976 282 FRAAIQLQFDFHRAIYNLGTVLYGLA 307 (496)
Q Consensus 282 ~~~Al~l~P~~~~a~~~lg~~~~~~g 307 (496)
|+++++++|++..++.++|.++..+|
T Consensus 66 ~~~a~~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 66 YQKALELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999998764
No 187
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.15 E-value=2.9e-09 Score=106.01 Aligned_cols=166 Identities=14% Similarity=-0.007 Sum_probs=130.3
Q ss_pred HHHHHhCCCCHHHHH--HHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCC
Q 010976 146 ANAIERNPEDYDALY--NWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGR 223 (496)
Q Consensus 146 ~~al~~~P~~~~a~~--~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~ 223 (496)
+++...-|.++++|- ..|..+...++ ...+.+|+.+|++|++++|+++.+|..++.+|..++...+.
T Consensus 184 ~r~~~~~p~~~~Aydl~Lra~~~l~~~~-----------~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~ 252 (372)
T 3ly7_A 184 ETLQKILPHRGALLTNFYQAHDYLLHGD-----------DKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPL 252 (372)
T ss_dssp HHHHHHSCSSGGGHHHHHHHHHHHHHCS-----------HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHcCC-----------HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCC
Confidence 345566788777654 45666666544 23378999999999999999999999999999764433322
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010976 224 TKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVL 303 (496)
Q Consensus 224 ~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~ 303 (496)
.......+.+++.. ..++..+|.++.++..++.++...|++ ++|+..+++|++++|+ ..++..+|.++
T Consensus 253 ~~~~~~~l~~a~~a-~~a~~~~~~~a~~~~alal~~l~~gd~----------d~A~~~l~rAl~Ln~s-~~a~~llG~~~ 320 (372)
T 3ly7_A 253 DEKQLAALNTEIDN-IVTLPELNNLSIIYQIKAVSALVKGKT----------DESYQAINTGIDLEMS-WLNYVLLGKVY 320 (372)
T ss_dssp CHHHHHHHHHHHHH-HHTCGGGTTCHHHHHHHHHHHHHHTCH----------HHHHHHHHHHHHHCCC-HHHHHHHHHHH
T ss_pred chhhHHHHHHHHHH-HHhcccCCcCHHHHHHHHHHHHhCCCH----------HHHHHHHHHHHhcCCC-HHHHHHHHHHH
Confidence 23333444445452 245678899999999999999999999 9999999999999975 78889999999
Q ss_pred HHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Q 010976 304 YGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALR 353 (496)
Q Consensus 304 ~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~al~ 353 (496)
...|+ +.+|.+.|.+|+.++|....|...-.
T Consensus 321 ~~~G~-------------------~~eA~e~~~~AlrL~P~~~t~~~~~~ 351 (372)
T 3ly7_A 321 EMKGM-------------------NREAADAYLTAFNLRPGANTLYWIEN 351 (372)
T ss_dssp HHTTC-------------------HHHHHHHHHHHHHHSCSHHHHHHHHH
T ss_pred HHCCC-------------------HHHHHHHHHHHHhcCCCcChHHHHhC
Confidence 99999 89999999999999999986655443
No 188
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.13 E-value=2.5e-10 Score=93.07 Aligned_cols=87 Identities=15% Similarity=0.166 Sum_probs=81.7
Q ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHH
Q 010976 203 LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKF 282 (496)
Q Consensus 203 ~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~ 282 (496)
++.+++++|.++.. .|++++|+ ..|+++++++|+++.+++++|.++..+|++ ++|+..|
T Consensus 3 ~~~~~~~~g~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~lg~~~~~~g~~----------~~A~~~~ 61 (111)
T 2l6j_A 3 QFEKQKEQGNSLFK----QGLYREAV-------HCYDQLITAQPQNPVGYSNKAMALIKLGEY----------TQAIQMC 61 (111)
T ss_dssp HHHHHHHHHHHHHT----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------HHHHHHH
T ss_pred hHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHhcCCCCHHHHHHHHHHHHHhcCH----------HHHHHHH
Confidence 46789999999999 99999999 899999999999999999999999999999 9999999
Q ss_pred HHHHHhcCCC------HHHHHHHHHHHHHcchhH
Q 010976 283 RAAIQLQFDF------HRAIYNLGTVLYGLAEDT 310 (496)
Q Consensus 283 ~~Al~l~P~~------~~a~~~lg~~~~~~g~~~ 310 (496)
+++++++|++ ..+++++|.++..+|+..
T Consensus 62 ~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (111)
T 2l6j_A 62 QQGLRYTSTAEHVAIRSKLQYRLELAQGAVGSVQ 95 (111)
T ss_dssp HHHHTSCSSTTSHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHhCCCccHHHHHHHHHHHHHHHHHHHHhHh
Confidence 9999999999 999999999999998643
No 189
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.12 E-value=1e-09 Score=107.24 Aligned_cols=161 Identities=12% Similarity=-0.021 Sum_probs=133.9
Q ss_pred hhhHhhccHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCC----C
Q 010976 130 EGRSRQRILTFAAKRYANAIERNP--EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT----L 203 (496)
Q Consensus 130 ~~~~~~g~~~~Ai~~~~~al~~~P--~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~----~ 203 (496)
..+...|++++|+..+.+.|..+| ++.+++..++.++..+|+ ++.|.+.++++.+.+|+ +
T Consensus 108 ~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r--------------~d~A~k~l~~~~~~~~d~~~~~ 173 (310)
T 3mv2_B 108 TAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNN--------------VSTASTIFDNYTNAIEDTVSGD 173 (310)
T ss_dssp HHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHhcCccccccc
Confidence 345667999999999999999997 899999999999999999 99999999999999994 3
Q ss_pred HHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHccCcchHHHhhhhHHHHH
Q 010976 204 HDAFYNWAIAISDRAKMRG--RTKEAEELWKQATKNYEKAVQLNWN--SPQALNNWGLALQELSAIVPAREKQTIVRTAI 279 (496)
Q Consensus 204 ~~a~~~lg~~~~~~~~~~g--~~~eA~~~~~~A~~~~~~Al~l~P~--~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai 279 (496)
-....+++.++..++ .| ++.+|. ..|+++.+..|+ ....+++ ++..+|++ ++|.
T Consensus 174 d~~l~~Laea~v~l~--~g~~~~q~A~-------~~f~El~~~~p~~~~~~lLln---~~~~~g~~----------~eAe 231 (310)
T 3mv2_B 174 NEMILNLAESYIKFA--TNKETATSNF-------YYYEELSQTFPTWKTQLGLLN---LHLQQRNI----------AEAQ 231 (310)
T ss_dssp HHHHHHHHHHHHHHH--HTCSTTTHHH-------HHHHHHHTTSCSHHHHHHHHH---HHHHHTCH----------HHHH
T ss_pred hHHHHHHHHHHHHHH--hCCccHHHHH-------HHHHHHHHhCCCcccHHHHHH---HHHHcCCH----------HHHH
Confidence 445566655533311 45 788888 899998888886 3445555 89999999 9999
Q ss_pred HHHHHHHHh----------cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHH
Q 010976 280 SKFRAAIQL----------QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSV 347 (496)
Q Consensus 280 ~~~~~Al~l----------~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~ 347 (496)
..++++++. +|+++.++.|+..+...+|+ .+..++.++.+.+|+++.
T Consensus 232 ~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk---------------------~a~~l~~qL~~~~P~hp~ 288 (310)
T 3mv2_B 232 GIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL---------------------DTEDLTNQLVKLDHEHAF 288 (310)
T ss_dssp HHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC---------------------TTHHHHHHHHHTTCCCHH
T ss_pred HHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh---------------------HHHHHHHHHHHhCCCChH
Confidence 999988887 59999999999999999996 456789999999999994
No 190
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.11 E-value=3.8e-09 Score=119.69 Aligned_cols=170 Identities=15% Similarity=0.113 Sum_probs=135.0
Q ss_pred hhhcHHHHHHHHHHhhccc-----hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhh
Q 010976 110 LAEQNNAAMELINSVTGVD-----EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDA 184 (496)
Q Consensus 110 ~~~~~~~A~~~~~~~l~~~-----~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~ 184 (496)
..++++.|.+++.++.... +..+...|++++|+..|.++ ++++.|..+|.++.++|+
T Consensus 1088 ~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGk------------- 1149 (1630)
T 1xi4_A 1088 HIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGN------------- 1149 (1630)
T ss_pred HHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCC-------------
Confidence 4556666666665443322 45566779999999999886 899999999999999999
Q ss_pred hHHHHHHHHHHHHHhCCC---------------------------CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH----
Q 010976 185 LLEEACKKYDEATRLCPT---------------------------LHDAFYNWAIAISDRAKMRGRTKEAEELWKQ---- 233 (496)
Q Consensus 185 ~~~~A~~~~~~Al~l~P~---------------------------~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~---- 233 (496)
|++|+++|..|.+..++ +...+.++|..+.. .|+|++|+..|.+
T Consensus 1150 -yEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~----eg~YeeA~~~Y~kA~ny 1224 (1630)
T 1xi4_A 1150 -WEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYD----EKMYDAAKLLYNNVSNF 1224 (1630)
T ss_pred -HHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHh----cCCHHHHHHHHHhhhHH
Confidence 99999999887765533 23356778888888 9999999987754
Q ss_pred ---------------HHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchH--------------------HHhhhhHHHH
Q 010976 234 ---------------ATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPA--------------------REKQTIVRTA 278 (496)
Q Consensus 234 ---------------A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A--------------------~~~~~~~~~A 278 (496)
|++++++| ++..+|.+.+.++...|++..| +++.|.+++|
T Consensus 1225 ~rLA~tLvkLge~q~AIEaarKA-----~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEA 1299 (1630)
T 1xi4_A 1225 GRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEEL 1299 (1630)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHh-----CCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHH
Confidence 66666666 5678888888888777777666 4478999999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHcc
Q 010976 279 ISKFRAAIQLQFDFHRAIYNLGTVLYGLA 307 (496)
Q Consensus 279 i~~~~~Al~l~P~~~~a~~~lg~~~~~~g 307 (496)
+..|+++|.+++.+...+..||.+|.+-.
T Consensus 1300 I~LlE~aL~LeraH~gmftELaiLyaKy~ 1328 (1630)
T 1xi4_A 1300 ITMLEAALGLERAHMGMFTELAILYSKFK 1328 (1630)
T ss_pred HHHHHHHhccChhHhHHHHHHHHHHHhCC
Confidence 99999999999999999999999998765
No 191
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.08 E-value=5.9e-10 Score=90.31 Aligned_cols=90 Identities=17% Similarity=0.235 Sum_probs=74.0
Q ss_pred hCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Q 010976 151 RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEEL 230 (496)
Q Consensus 151 ~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~ 230 (496)
.+|+++.+++++|.+|..+|+ +++|+..|+++++++|++..+|+++|.+|.. +|++++|+
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~--------------~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~----~g~~~~A~-- 61 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDN--------------ASRALALFEELVETDPDYVGTYYHLGKLYER----LDRTDDAI-- 61 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH----TTCHHHHH--
T ss_pred CCccCHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHH--
Confidence 479999999999999999999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHccCc
Q 010976 231 WKQATKNYEKAVQLNW--NSPQALNNWGLALQELSAI 265 (496)
Q Consensus 231 ~~~A~~~~~~Al~l~P--~~~~a~~~lg~~l~~~g~~ 265 (496)
..|++++++.| .+......+..++...+..
T Consensus 62 -----~~~~~al~l~~~~~~~~~~~~l~~~l~~~~~~ 93 (100)
T 3ma5_A 62 -----DTYAQGIEVAREEGTQKDLSELQDAKLKAEGL 93 (100)
T ss_dssp -----HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTT
T ss_pred -----HHHHHHHhhhhcCCchhHHHHHHHHHHHcccc
Confidence 66666666654 3455556666666555543
No 192
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.05 E-value=5.7e-10 Score=116.82 Aligned_cols=129 Identities=12% Similarity=-0.065 Sum_probs=111.3
Q ss_pred hHhhccHHHHHHHHHHHHHhC-----C---CCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh----
Q 010976 132 RSRQRILTFAAKRYANAIERN-----P---EDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL---- 199 (496)
Q Consensus 132 ~~~~g~~~~Ai~~~~~al~~~-----P---~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l---- 199 (496)
+..+|+|++|+.+|++++++. | +...++.+||.+|..+|+ |++|+.+|+++|++
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~--------------~~eA~~~~~~aL~i~~~~ 384 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQA--------------YEEASHYARRMVDGYMKL 384 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcC--------------HHHHHHHHHHHHHHHHHH
Confidence 446899999999999999863 3 445789999999999999 99999999999987
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHccCcchHHHhhhh
Q 010976 200 ----CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN-WNSPQALNNWGLALQELSAIVPAREKQTI 274 (496)
Q Consensus 200 ----~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~-P~~~~a~~~lg~~l~~~g~~~~A~~~~~~ 274 (496)
+|+.+..++|||.+|.. +|++++|+..|++|++.+++.+.-+ |.-...+.+++.++.+++++
T Consensus 385 lG~~Hp~~a~~l~nLa~~~~~----~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~--------- 451 (490)
T 3n71_A 385 YHHNNAQLGMAVMRAGLTNWH----AGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMF--------- 451 (490)
T ss_dssp SCTTCHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHH---------
T ss_pred cCCCCHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHH---------
Confidence 44456789999999999 9999999999999999999887443 55566778999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 010976 275 VRTAISKFRAAIQL 288 (496)
Q Consensus 275 ~~~Ai~~~~~Al~l 288 (496)
++|...|+++.+.
T Consensus 452 -~~ae~~~~~~~~~ 464 (490)
T 3n71_A 452 -RQNEFMYHKMREA 464 (490)
T ss_dssp -HHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHH
Confidence 9999999998654
No 193
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.05 E-value=4.3e-10 Score=90.20 Aligned_cols=92 Identities=23% Similarity=0.292 Sum_probs=83.3
Q ss_pred HHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 010976 159 LYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHD-AFYNWAIAISDRAKMRGRTKEAEELWKQATKN 237 (496)
Q Consensus 159 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~-a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~ 237 (496)
.+.+|.++...|+ +++|+..|+++++++|++.. +++++|.+|.. +|++++|+ ..
T Consensus 3 ~~~~a~~~~~~~~--------------~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~----~~~~~~A~-------~~ 57 (99)
T 2kc7_A 3 QLKTIKELINQGD--------------IENALQALEEFLQTEPVGKDEAYYLMGNAYRK----LGDWQKAL-------NN 57 (99)
T ss_dssp THHHHHHHHHHTC--------------HHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHH----HTCHHHHH-------HH
T ss_pred HHHHHHHHHHcCC--------------HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH----cCCHHHHH-------HH
Confidence 3678999999999 99999999999999999999 99999999999 99999999 89
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCH
Q 010976 238 YEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH 293 (496)
Q Consensus 238 ~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~ 293 (496)
|+++++++|++..++++ +.+ .+++..|++++..+|++.
T Consensus 58 ~~~al~~~p~~~~~~~~--------~~~----------~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 58 YQSAIELNPDSPALQAR--------KMV----------MDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHHHHHHCTTSTHHHHH--------HHH----------HHHHHHHCCTTHHHHCCS
T ss_pred HHHHHhcCCCcHHHHHH--------HHH----------HHHHHHHHHHhccCcccc
Confidence 99999999999998865 444 899999999998888764
No 194
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.04 E-value=1.3e-09 Score=88.30 Aligned_cols=89 Identities=13% Similarity=0.100 Sum_probs=76.9
Q ss_pred hCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHH
Q 010976 199 LCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTA 278 (496)
Q Consensus 199 l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~A 278 (496)
.+|+++.+++++|.+|.. +|++++|+ ..|+++++++|+++.+|+++|.+|..+|++ ++|
T Consensus 2 ~~p~~~~~~~~lg~~~~~----~g~~~~A~-------~~~~~al~~~p~~~~a~~~lg~~~~~~g~~----------~~A 60 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLK----HDNASRAL-------ALFEELVETDPDYVGTYYHLGKLYERLDRT----------DDA 60 (100)
T ss_dssp ---CCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHSTTCTHHHHHHHHHHHHTTCH----------HHH
T ss_pred CCccCHHHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhCCCcHHHHHHHHHHHHHcCCH----------HHH
Confidence 479999999999999999 99999999 899999999999999999999999999999 999
Q ss_pred HHHHHHHHHhcCC--CHHHHHHHHHHHHHcch
Q 010976 279 ISKFRAAIQLQFD--FHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 279 i~~~~~Al~l~P~--~~~a~~~lg~~~~~~g~ 308 (496)
+..|++++++.|. +......+..++...+.
T Consensus 61 ~~~~~~al~l~~~~~~~~~~~~l~~~l~~~~~ 92 (100)
T 3ma5_A 61 IDTYAQGIEVAREEGTQKDLSELQDAKLKAEG 92 (100)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhhcCCchhHHHHHHHHHHHccc
Confidence 9999999999764 45666666666665553
No 195
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.03 E-value=1.9e-09 Score=109.98 Aligned_cols=163 Identities=5% Similarity=-0.032 Sum_probs=132.7
Q ss_pred hHhhccHHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHH
Q 010976 132 RSRQRILTFAAKRYANAIERNPEDY-----------------DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYD 194 (496)
Q Consensus 132 ~~~~g~~~~Ai~~~~~al~~~P~~~-----------------~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 194 (496)
+...|+|++|++.|.++++.+|... .++.++|.+|...|+ +++|++.|+
T Consensus 14 l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~--------------~~~a~~~~~ 79 (434)
T 4b4t_Q 14 LVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGA--------------KDKLREFIP 79 (434)
T ss_dssp HHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTC--------------HHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCC--------------HHHHHHHHH
Confidence 3457999999999999999988653 468999999999999 999999999
Q ss_pred HHHHhCCCCH------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchH
Q 010976 195 EATRLCPTLH------DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPA 268 (496)
Q Consensus 195 ~Al~l~P~~~------~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A 268 (496)
+++.+.+... .++.++|.++.. .|++++|+..+++++....+. ...+....++.++|.+|...|++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~la~~~~~~g~~--- 151 (434)
T 4b4t_Q 80 HSTEYMMQFAKSKTVKVLKTLIEKFEQV----PDSLDDQIFVCEKSIEFAKRE-KRVFLKHSLSIKLATLHYQKKQY--- 151 (434)
T ss_dssp HTHHHHHTSCHHHHHHHHHHHHHHHCSC----CSCHHHHHHHHHHHHHHHHHS-SCCSSHHHHHHHHHHHHHHHTCH---
T ss_pred HHHHHHHHccchHHHHHHHHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHh-CccHHHHHHHHHHHHHHHHccCh---
Confidence 9999866543 345677888877 999999997777776665532 33445578999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHh------cCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcC
Q 010976 269 REKQTIVRTAISKFRAAIQL------QFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALK 342 (496)
Q Consensus 269 ~~~~~~~~~Ai~~~~~Al~l------~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~ 342 (496)
.+|+..+++++.. .+....++.++|.+|..+|+ |..|..+|.+++.+.
T Consensus 152 -------~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 152 -------KDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRN-------------------LAKSKASLTAARTAA 205 (434)
T ss_dssp -------HHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCc-------------------HHHHHHHHHHHHHHh
Confidence 9999999999886 34456899999999999998 777777777776553
No 196
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.03 E-value=5.8e-09 Score=89.92 Aligned_cols=126 Identities=18% Similarity=0.142 Sum_probs=103.6
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010976 135 QRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAI 214 (496)
Q Consensus 135 ~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~ 214 (496)
.+++++|+.+|+++.+.... .+. +|.+|..... +++|+++|+++.+. .++.++++||.+|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~--~a~--lg~~y~~g~~--------------~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y 67 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM--FGC--LSLVSNSQIN--------------KQKLFQYLSKACEL--NSGNGCRFLGDFY 67 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT--THH--HHHHTCTTSC--------------HHHHHHHHHHHHHT--TCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH--hhh--HHHHHHcCCC--------------HHHHHHHHHHHHcC--CCHHHHHHHHHHH
Confidence 47899999999999998744 444 9999998888 99999999999987 7899999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----ccCcchHHHhhhhHHHHHHHHHHHHHhcC
Q 010976 215 SDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE----LSAIVPAREKQTIVRTAISKFRAAIQLQF 290 (496)
Q Consensus 215 ~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~----~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P 290 (496)
..-.-..+++++|+ .+|+++.+. .++.++++||.+|.. .+++ ++|+.+|++|.+.
T Consensus 68 ~~G~g~~~d~~~A~-------~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~----------~~A~~~~~~Aa~~-- 126 (138)
T 1klx_A 68 ENGKYVKKDLRKAA-------QYYSKACGL--NDQDGCLILGYKQYAGKGVVKNE----------KQAVKTFEKACRL-- 126 (138)
T ss_dssp HHCSSSCCCHHHHH-------HHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH----------HHHHHHHHHHHHT--
T ss_pred HcCCCCCccHHHHH-------HHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCH----------HHHHHHHHHHHHC--
Confidence 75100135777777 778887776 789999999999999 7787 9999999999987
Q ss_pred CCHHHHHHHHH
Q 010976 291 DFHRAIYNLGT 301 (496)
Q Consensus 291 ~~~~a~~~lg~ 301 (496)
.++.+.++|+.
T Consensus 127 g~~~A~~~l~~ 137 (138)
T 1klx_A 127 GSEDACGILNN 137 (138)
T ss_dssp TCHHHHHHC--
T ss_pred CCHHHHHHHhh
Confidence 56777777764
No 197
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.01 E-value=1.8e-09 Score=113.04 Aligned_cols=119 Identities=13% Similarity=-0.082 Sum_probs=100.4
Q ss_pred HHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 010976 162 WALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL--------CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQ 233 (496)
Q Consensus 162 lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l--------~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~ 233 (496)
.+..+..+|+ |++|+..|++++++ +|+....+.+||.+|.. +|+|++|+.+|++
T Consensus 315 ~a~~~~~qg~--------------~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~----~g~~~eA~~~~~~ 376 (490)
T 3n71_A 315 KIDKARSEGL--------------YHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY----LQAYEEASHYARR 376 (490)
T ss_dssp HHHHHHTTTC--------------HHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH----TTCHHHHHHHHHH
T ss_pred HHHHHHhCCC--------------HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH----hcCHHHHHHHHHH
Confidence 3445667788 99999999999997 34445789999999999 9999999999999
Q ss_pred HHHHHHHHHhc-CCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHh-----cCCCH---HHHHHHHHHHH
Q 010976 234 ATKNYEKAVQL-NWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL-----QFDFH---RAIYNLGTVLY 304 (496)
Q Consensus 234 A~~~~~~Al~l-~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l-----~P~~~---~a~~~lg~~~~ 304 (496)
|++.+++.+.- +|+-...++|||.+|..+|++ ++|+..|++|+++ .|+++ ....+|+.++.
T Consensus 377 aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~----------~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~ 446 (490)
T 3n71_A 377 MVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHI----------EVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEM 446 (490)
T ss_dssp HHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH
Confidence 99999988743 355677899999999999999 9999999999986 56665 56678888888
Q ss_pred Hcch
Q 010976 305 GLAE 308 (496)
Q Consensus 305 ~~g~ 308 (496)
.++.
T Consensus 447 e~~~ 450 (490)
T 3n71_A 447 ELRM 450 (490)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8887
No 198
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.00 E-value=6.8e-09 Score=103.34 Aligned_cols=151 Identities=15% Similarity=0.053 Sum_probs=114.0
Q ss_pred HHHHHHHHhhccchhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHH
Q 010976 116 AAMELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDE 195 (496)
Q Consensus 116 ~A~~~~~~~l~~~~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 195 (496)
.|.++|-++...... .....+.+|+.+|++|++++|+++.+|..++.+|...... .............++.. ..
T Consensus 195 ~Aydl~Lra~~~l~~--~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~---~~~~~~~~~~l~~a~~a-~~ 268 (372)
T 3ly7_A 195 ALLTNFYQAHDYLLH--GDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQ---HPLDEKQLAALNTEIDN-IV 268 (372)
T ss_dssp GGHHHHHHHHHHHHH--CSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH---SCCCHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhcc---CCCchhhHHHHHHHHHH-HH
Confidence 455666555444321 1246679999999999999999999999999988743320 00111111122233331 13
Q ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhH
Q 010976 196 ATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIV 275 (496)
Q Consensus 196 Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~ 275 (496)
++.++|.++.++..++.++.. .|++++|+ ..+++|+.++| +..+|..+|.++...|++
T Consensus 269 a~~~~~~~a~~~~alal~~l~----~gd~d~A~-------~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~---------- 326 (372)
T 3ly7_A 269 TLPELNNLSIIYQIKAVSALV----KGKTDESY-------QAINTGIDLEM-SWLNYVLLGKVYEMKGMN---------- 326 (372)
T ss_dssp TCGGGTTCHHHHHHHHHHHHH----HTCHHHHH-------HHHHHHHHHCC-CHHHHHHHHHHHHHTTCH----------
T ss_pred hcccCCcCHHHHHHHHHHHHh----CCCHHHHH-------HHHHHHHhcCC-CHHHHHHHHHHHHHCCCH----------
Confidence 446789999999999999988 99999999 89999999997 578889999999999999
Q ss_pred HHHHHHHHHHHHhcCCCHH
Q 010976 276 RTAISKFRAAIQLQFDFHR 294 (496)
Q Consensus 276 ~~Ai~~~~~Al~l~P~~~~ 294 (496)
++|++.|++|+.++|....
T Consensus 327 ~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 327 REAADAYLTAFNLRPGANT 345 (372)
T ss_dssp HHHHHHHHHHHHHSCSHHH
T ss_pred HHHHHHHHHHHhcCCCcCh
Confidence 9999999999999998753
No 199
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.97 E-value=3.8e-09 Score=107.78 Aligned_cols=165 Identities=8% Similarity=-0.073 Sum_probs=127.4
Q ss_pred chhhhHhhccHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhC-
Q 010976 128 DEEGRSRQRILTFAAKRYANAIERNPEDY------DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC- 200 (496)
Q Consensus 128 ~~~~~~~~g~~~~Ai~~~~~al~~~P~~~------~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~- 200 (496)
.+..+..+|++++|+.+|.+++...+... .+...+|.++...|+ +++|+.+|++++...
T Consensus 61 l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~a~~~~~~~~~~~~ 126 (434)
T 4b4t_Q 61 LGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDS--------------LDDQIFVCEKSIEFAK 126 (434)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSC--------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCC--------------HHHHHHHHHHHHHHHH
Confidence 34557778999999999999998876543 345667888888888 999999999999873
Q ss_pred -----CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhH
Q 010976 201 -----PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIV 275 (496)
Q Consensus 201 -----P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~ 275 (496)
+..+.++.++|.+|.. .|++.+|+..+++++..+.+. .-.+....++.++|.+|..+|++
T Consensus 127 ~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------- 191 (434)
T 4b4t_Q 127 REKRVFLKHSLSIKLATLHYQ----KKQYKDSLALINDLLREFKKL-DDKPSLVDVHLLESKVYHKLRNL---------- 191 (434)
T ss_dssp HSSCCSSHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHTTS-SCSTHHHHHHHHHHHHHHHTTCH----------
T ss_pred HhCccHHHHHHHHHHHHHHHH----ccChHHHHHHHHHHHHHHHhc-ccchhHHHHHHHHHHHHHHhCcH----------
Confidence 3347889999999999 999999996666555443321 12344678999999999999999
Q ss_pred HHHHHHHHHHHHhcCC---C----HHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHh
Q 010976 276 RTAISKFRAAIQLQFD---F----HRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHA 340 (496)
Q Consensus 276 ~~Ai~~~~~Al~l~P~---~----~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 340 (496)
++|...|++++.+.+. . ...+.++|.++...++ |..|..+|.+++.
T Consensus 192 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------------------y~~A~~~~~~a~~ 244 (434)
T 4b4t_Q 192 AKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKD-------------------YKTAFSYFFESFE 244 (434)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSC-------------------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHh-------------------HHHHHHHHHHHHH
Confidence 9999999999987532 2 3456667777777776 7777777777665
No 200
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.95 E-value=1.4e-08 Score=97.23 Aligned_cols=178 Identities=12% Similarity=0.019 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcC-CCC------CCCCCcchhhhHHHHHHHHHHHHHh------------
Q 010976 139 TFAAKRYANAIERNPEDYDALYNWALVLQESAD-NVS------LDSTSPSKDALLEEACKKYDEATRL------------ 199 (496)
Q Consensus 139 ~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~-~~~------~~~~~~~~~~~~~~A~~~~~~Al~l------------ 199 (496)
-..+.+++..+..+|++...+...|..|..-+. +++ +......+...+..|.+.|.++...
T Consensus 49 P~~Lk~~e~Ll~~~P~~~~Ll~~~a~ly~~Ya~afV~~~a~~~~~~~~~~~~~~~~RA~~Ly~ra~~y~~raL~~~~~~~ 128 (301)
T 3u64_A 49 PLVLKVYEALHLQNPAHRGLSLAVGRLYIMYANAFVQTPAQYLPEDEFEAQNEAYSRARKLYLRGARYALSSLETAYPGF 128 (301)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHTHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTH
T ss_pred cHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHhcCchhhcchhhHhhhhhhHHHHHHHHHHHHHHHHHHHHHhCccH
Confidence 446778888899999998777766666654332 110 0001112223345555555554432
Q ss_pred -------------------CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC--CHHHHHHHHHH
Q 010976 200 -------------------CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN--SPQALNNWGLA 258 (496)
Q Consensus 200 -------------------~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~--~~~a~~~lg~~ 258 (496)
+|++.++++..|++....+...+.--.|+....+|...+++++++||+ +..+|..+|.+
T Consensus 129 ~~~~~~~~~~~~~~~l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~l 208 (301)
T 3u64_A 129 TREVFSGDEQRLHKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKF 208 (301)
T ss_dssp HHHHTSSCHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHH
T ss_pred HHHHHhcchhhHHHHHHHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHH
Confidence 456678889999888764333222235677777888999999999999 67799999999
Q ss_pred HHHc-----cCcchHHHhhhhHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHc-chhHHhccCCCCCCCCCcHHHHHHH
Q 010976 259 LQEL-----SAIVPAREKQTIVRTAISKFRAAIQLQFDF-HRAIYNLGTVLYGL-AEDTLRTGGTVNPREVSPNELYSQS 331 (496)
Q Consensus 259 l~~~-----g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~-~~a~~~lg~~~~~~-g~~~~a~~~~~~~~~~~~~~~~~~A 331 (496)
|... |+. ++|..+|++||+++|+. ..+++.+|..+... |+ +..+
T Consensus 209 Y~~vPp~~gGd~----------ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd-------------------~~~a 259 (301)
T 3u64_A 209 YAAAPESFGGGM----------EKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNN-------------------RAGF 259 (301)
T ss_dssp HHHSCTTTTCCH----------HHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTC-------------------HHHH
T ss_pred HHhCCCccCCCH----------HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCC-------------------HHHH
Confidence 9995 888 99999999999999975 99999999999885 77 7889
Q ss_pred HHHHHHHHhcCCcH
Q 010976 332 AIYIAAAHALKPSY 345 (496)
Q Consensus 332 ~~~~~~a~~l~p~~ 345 (496)
..+++++++.+|..
T Consensus 260 ~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 260 DEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHCCGGG
T ss_pred HHHHHHHHcCCCCC
Confidence 99999999998874
No 201
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.91 E-value=2.5e-09 Score=85.67 Aligned_cols=71 Identities=18% Similarity=0.160 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHH
Q 010976 207 FYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQ-ALNNWGLALQELSAIVPAREKQTIVRTAISKFRAA 285 (496)
Q Consensus 207 ~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~-a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~A 285 (496)
.+++|.++.. .|++++|+ ..|+++++.+|+++. +++++|.+|..+|++ ++|+..|+++
T Consensus 3 ~~~~a~~~~~----~~~~~~A~-------~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~----------~~A~~~~~~a 61 (99)
T 2kc7_A 3 QLKTIKELIN----QGDIENAL-------QALEEFLQTEPVGKDEAYYLMGNAYRKLGDW----------QKALNNYQSA 61 (99)
T ss_dssp THHHHHHHHH----HTCHHHHH-------HHHHHHHHHCSSTHHHHHHHHHHHHHHHTCH----------HHHHHHHHHH
T ss_pred HHHHHHHHHH----cCCHHHHH-------HHHHHHHHHCCCcHHHHHHHHHHHHHHcCCH----------HHHHHHHHHH
Confidence 3678889988 99999999 899999999999999 999999999999999 9999999999
Q ss_pred HHhcCCCHHHHHH
Q 010976 286 IQLQFDFHRAIYN 298 (496)
Q Consensus 286 l~l~P~~~~a~~~ 298 (496)
++++|++..++++
T Consensus 62 l~~~p~~~~~~~~ 74 (99)
T 2kc7_A 62 IELNPDSPALQAR 74 (99)
T ss_dssp HHHCTTSTHHHHH
T ss_pred HhcCCCcHHHHHH
Confidence 9999999988844
No 202
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.90 E-value=4.1e-08 Score=84.53 Aligned_cols=117 Identities=18% Similarity=0.147 Sum_probs=99.3
Q ss_pred hhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 010976 182 KDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE 261 (496)
Q Consensus 182 ~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~ 261 (496)
..+++++|++.|+++.+..... +. +|.+|.. .+..++|+ .+|+++.+. .++.++++||.+|..
T Consensus 7 ~~~d~~~A~~~~~~aa~~g~~~--a~--lg~~y~~----g~~~~~A~-------~~~~~Aa~~--g~~~a~~~Lg~~y~~ 69 (138)
T 1klx_A 7 VKKDLKKAIQYYVKACELNEMF--GC--LSLVSNS----QINKQKLF-------QYLSKACEL--NSGNGCRFLGDFYEN 69 (138)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTT--HH--HHHHTCT----TSCHHHHH-------HHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHcCCCHh--hh--HHHHHHc----CCCHHHHH-------HHHHHHHcC--CCHHHHHHHHHHHHc
Confidence 3467999999999999987444 44 9999988 88888877 778887776 789999999999998
Q ss_pred ----ccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----cchhHHhccCCCCCCCCCcHHHHHHHHH
Q 010976 262 ----LSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYG----LAEDTLRTGGTVNPREVSPNELYSQSAI 333 (496)
Q Consensus 262 ----~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~----~g~~~~a~~~~~~~~~~~~~~~~~~A~~ 333 (496)
.+++ ++|+.+|++|.+. .++.++++||.+|.. .++ +.+|..
T Consensus 70 G~g~~~d~----------~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d-------------------~~~A~~ 118 (138)
T 1klx_A 70 GKYVKKDL----------RKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKN-------------------EKQAVK 118 (138)
T ss_dssp CSSSCCCH----------HHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCC-------------------HHHHHH
T ss_pred CCCCCccH----------HHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcC-------------------HHHHHH
Confidence 7777 9999999999987 789999999999987 555 789999
Q ss_pred HHHHHHhcCCcHH
Q 010976 334 YIAAAHALKPSYS 346 (496)
Q Consensus 334 ~~~~a~~l~p~~~ 346 (496)
+|+++.+......
T Consensus 119 ~~~~Aa~~g~~~A 131 (138)
T 1klx_A 119 TFEKACRLGSEDA 131 (138)
T ss_dssp HHHHHHHTTCHHH
T ss_pred HHHHHHHCCCHHH
Confidence 9999998865443
No 203
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.86 E-value=3e-08 Score=94.96 Aligned_cols=157 Identities=13% Similarity=0.033 Sum_probs=119.8
Q ss_pred hhcHHHHHHHHHHhhccchhhhHhh-ccHHHHHH-----HHHHH-HHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchh
Q 010976 111 AEQNNAAMELINSVTGVDEEGRSRQ-RILTFAAK-----RYANA-IERNPEDYDALYNWALVLQESADNVSLDSTSPSKD 183 (496)
Q Consensus 111 ~~~~~~A~~~~~~~l~~~~~~~~~~-g~~~~Ai~-----~~~~a-l~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~ 183 (496)
......|..+|.++......++... ..+.+++. -+.++ -+.+|+++++++..|.+....-. ........+
T Consensus 100 ~~~~~RA~~Ly~ra~~y~~raL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dve~L~W~ai~~ss~a~---~~~gg~~Al 176 (301)
T 3u64_A 100 NEAYSRARKLYLRGARYALSSLETAYPGFTREVFSGDEQRLHKVLSRCTRVDVGTLYWVGTGYVAAFA---LTPLGSALP 176 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTHHHHHTSSCHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHT---TSCTTSCCH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHhcchhhHHHHHHHcCccccHHHHHHHHHHHHHHh---cCCCChHHH
Confidence 3445566667666665554443322 33333332 22333 34579999999999988866322 112335677
Q ss_pred hhHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHHHhcCCCC-HHHHHHH
Q 010976 184 ALLEEACKKYDEATRLCPT--LHDAFYNWAIAISDRAKMR-----GRTKEAEELWKQATKNYEKAVQLNWNS-PQALNNW 255 (496)
Q Consensus 184 ~~~~~A~~~~~~Al~l~P~--~~~a~~~lg~~~~~~~~~~-----g~~~eA~~~~~~A~~~~~~Al~l~P~~-~~a~~~l 255 (496)
+...+|...+++|++++|+ +..+|..+|.+|.. . |+.++|. .+|++||+++|+. ..+++.+
T Consensus 177 ~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~----vPp~~gGd~ekA~-------~~ferAL~LnP~~~id~~v~Y 245 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAA----APESFGGGMEKAH-------TAFEHLTRYCSAHDPDHHITY 245 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHH----SCTTTTCCHHHHH-------HHHHHHHHHCCTTCSHHHHHH
T ss_pred HhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHh----CCCccCCCHHHHH-------HHHHHHHHhCCCCCchHHHHH
Confidence 8899999999999999999 66799999999987 7 9999999 8999999999975 9999999
Q ss_pred HHHHHHc-cCcchHHHhhhhHHHHHHHHHHHHHhcCC
Q 010976 256 GLALQEL-SAIVPAREKQTIVRTAISKFRAAIQLQFD 291 (496)
Q Consensus 256 g~~l~~~-g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~ 291 (496)
|..+... |++ ++|...+++|++.+|.
T Consensus 246 A~~l~~~~gd~----------~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 246 ADALCIPLNNR----------AGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHTTTTTTCH----------HHHHHHHHHHHHCCGG
T ss_pred HHHHHHhcCCH----------HHHHHHHHHHHcCCCC
Confidence 9999884 888 9999999999999877
No 204
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.85 E-value=2.9e-09 Score=108.72 Aligned_cols=186 Identities=13% Similarity=0.042 Sum_probs=70.0
Q ss_pred hhhhhhcHHHHHHHHHHhhccc-----hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcc
Q 010976 107 PHQLAEQNNAAMELINSVTGVD-----EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPS 181 (496)
Q Consensus 107 ~~~~~~~~~~A~~~~~~~l~~~-----~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~ 181 (496)
++...+++++|++.|.+.-... .......|++++|+.+++.+++..++ +.+...++.+|.++|+
T Consensus 41 A~l~~g~~~eAIdsfika~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~-~~i~~~Li~~Y~Klg~---------- 109 (449)
T 1b89_A 41 AQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE-SYVETELIFALAKTNR---------- 109 (449)
T ss_dssp ---------------------------------------------------------------------C----------
T ss_pred HHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCcc-chhHHHHHHHHHHhCC----------
Confidence 3345566666666665532222 12233457777777777777764333 5666677777777777
Q ss_pred hhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 010976 182 KDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE 261 (496)
Q Consensus 182 ~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~ 261 (496)
+.++.++++. |+ ..+|.++|..+.. .|++++|+ .+|.++ ..|..+|.++.+
T Consensus 110 ----l~e~e~f~~~-----pn-~~a~~~IGd~~~~----~g~yeeA~-------~~Y~~a--------~n~~~LA~~L~~ 160 (449)
T 1b89_A 110 ----LAELEEFING-----PN-NAHIQQVGDRCYD----EKMYDAAK-------LLYNNV--------SNFGRLASTLVH 160 (449)
T ss_dssp ----HHHHTTTTTC-----C---------------------CTTTHH-------HHHHHT--------TCHHHHHHHHHT
T ss_pred ----HHHHHHHHcC-----Cc-HHHHHHHHHHHHH----cCCHHHHH-------HHHHHh--------hhHHHHHHHHHH
Confidence 6666666542 33 2477777777777 77777777 444433 356667777777
Q ss_pred ccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHH------------HHH
Q 010976 262 LSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNE------------LYS 329 (496)
Q Consensus 262 ~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~------------~~~ 329 (496)
+|++ ++|++.|++| +++..|..++.++...|+...+....+. ....|.+ .+.
T Consensus 161 Lg~y----------q~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~l~~lv~~Yek~G~~e 224 (449)
T 1b89_A 161 LGEY----------QAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADELEELINYYQDRGYFE 224 (449)
T ss_dssp TTCH----------HHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHHHHHHHHHHHHTTCHH
T ss_pred hccH----------HHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhhHHHHHHHHHHCCCHH
Confidence 7776 8888888877 4677777777777777766555443332 2233332 267
Q ss_pred HHHHHHHHHHhcCCcHHHH
Q 010976 330 QSAIYIAAAHALKPSYSVY 348 (496)
Q Consensus 330 ~A~~~~~~a~~l~p~~~~y 348 (496)
+++.++++++.+++.+...
T Consensus 225 Eai~lLe~aL~le~ah~~~ 243 (449)
T 1b89_A 225 ELITMLEAALGLERAHMGM 243 (449)
T ss_dssp HHHHHHHHHTTSTTCCHHH
T ss_pred HHHHHHHHHhCCcHHHHHH
Confidence 8889999999999887633
No 205
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.84 E-value=4.1e-09 Score=107.55 Aligned_cols=156 Identities=12% Similarity=0.070 Sum_probs=96.1
Q ss_pred hhhhhcHHHHHHHHHHhhccc---------hhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCC
Q 010976 108 HQLAEQNNAAMELINSVTGVD---------EEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDST 178 (496)
Q Consensus 108 ~~~~~~~~~A~~~~~~~l~~~---------~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~ 178 (496)
....|++++|+.++..++... ..++.+.|++.++.+.++. |+. .+|.++|..+...|+
T Consensus 71 ae~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~-----pn~-~a~~~IGd~~~~~g~------- 137 (449)
T 1b89_A 71 ANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFING-----PNN-AHIQQVGDRCYDEKM------- 137 (449)
T ss_dssp --------------------------------------CHHHHTTTTTC-----C-----------------C-------
T ss_pred HHhCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhCCHHHHHHHHcC-----CcH-HHHHHHHHHHHHcCC-------
Confidence 345788888988887776432 2356778999998888853 543 599999999999999
Q ss_pred CcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 010976 179 SPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA 258 (496)
Q Consensus 179 ~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~ 258 (496)
|++|+.+|.++ ..|..+|.++.. +|++++|+ ++|+++ +++.+|..++.+
T Consensus 138 -------yeeA~~~Y~~a--------~n~~~LA~~L~~----Lg~yq~AV-------ea~~KA-----~~~~~Wk~v~~a 186 (449)
T 1b89_A 138 -------YDAAKLLYNNV--------SNFGRLASTLVH----LGEYQAAV-------DGARKA-----NSTRTWKEVCFA 186 (449)
T ss_dssp -------TTTHHHHHHHT--------TCHHHHHHHHHT----TTCHHHHH-------HHHHHH-----TCHHHHHHHHHH
T ss_pred -------HHHHHHHHHHh--------hhHHHHHHHHHH----hccHHHHH-------HHHHHc-----CCchhHHHHHHH
Confidence 99999999987 468899999999 99999999 677776 478888888888
Q ss_pred HHHccCcchH--------------------HHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcc
Q 010976 259 LQELSAIVPA--------------------REKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLA 307 (496)
Q Consensus 259 l~~~g~~~~A--------------------~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g 307 (496)
+...|+++.| +++.|++++|+..+++++.+++.+..++..||.+|.+-.
T Consensus 187 Cv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~ 255 (449)
T 1b89_A 187 CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 255 (449)
T ss_dssp HHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTC
T ss_pred HHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcC
Confidence 8888877776 457788999999999999999999999999999998765
No 206
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.78 E-value=9.3e-08 Score=93.43 Aligned_cols=152 Identities=7% Similarity=-0.042 Sum_probs=126.5
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHH
Q 010976 141 AAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCP--TLHDAFYNWAIAISDRA 218 (496)
Q Consensus 141 Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P--~~~~a~~~lg~~~~~~~ 218 (496)
|+..+++.+...+....+++.+|.++...|+ +++|++.+.+.+..+| ++.+++..++.++..
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~~~g~--------------~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~-- 148 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQAILGD--------------LDKSLETCVEGIDNDEAEGTTELLLLAIEVALL-- 148 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHcCC--------------HHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHH--
Confidence 7888999888877778888999999999999 9999999999999997 889999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHHHhcCCC----CHHHHHHHHH--HHHHcc--CcchHHHhhhhHHHHHHHHHHHHHhcC
Q 010976 219 KMRGRTKEAEELWKQATKNYEKAVQLNWN----SPQALNNWGL--ALQELS--AIVPAREKQTIVRTAISKFRAAIQLQF 290 (496)
Q Consensus 219 ~~~g~~~eA~~~~~~A~~~~~~Al~l~P~----~~~a~~~lg~--~l~~~g--~~~~A~~~~~~~~~Ai~~~~~Al~l~P 290 (496)
+|+.+.|. +.+++..+.+|+ +-.++.+++. +....| ++ .+|...|+++....|
T Consensus 149 --~~r~d~A~-------k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~----------q~A~~~f~El~~~~p 209 (310)
T 3mv2_B 149 --NNNVSTAS-------TIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETA----------TSNFYYYEELSQTFP 209 (310)
T ss_dssp --TTCHHHHH-------HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTT----------THHHHHHHHHHTTSC
T ss_pred --CCCHHHHH-------HHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccH----------HHHHHHHHHHHHhCC
Confidence 99999999 788888888883 3344455544 455556 78 999999999988888
Q ss_pred C--CHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhc----------CCcHHHHH
Q 010976 291 D--FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHAL----------KPSYSVYS 349 (496)
Q Consensus 291 ~--~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l----------~p~~~~y~ 349 (496)
+ ....++| ++..+|+ |.+|...+++.+++ +|+++...
T Consensus 210 ~~~~~~lLln---~~~~~g~-------------------~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~L 258 (310)
T 3mv2_B 210 TWKTQLGLLN---LHLQQRN-------------------IAEAQGIVELLLSDYYSVEQKENAVLYKPTFL 258 (310)
T ss_dssp SHHHHHHHHH---HHHHHTC-------------------HHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHH
T ss_pred CcccHHHHHH---HHHHcCC-------------------HHHHHHHHHHHHHhcccccccccCCCCCHHHH
Confidence 7 3445555 8999998 88999999887776 47788655
No 207
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.66 E-value=7.5e-08 Score=99.19 Aligned_cols=107 Identities=11% Similarity=-0.046 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHH
Q 010976 186 LEEACKKYDEATRL-----CPTL---HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQ-LNWNSPQALNNWG 256 (496)
Q Consensus 186 ~~~A~~~~~~Al~l-----~P~~---~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~-l~P~~~~a~~~lg 256 (496)
|++|+..|++++++ .|++ ...+.++|.+|.. +|+|++|+.++++++..|++.+- .+|.-...++|||
T Consensus 303 ~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~----~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa 378 (429)
T 3qwp_A 303 WEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN----LGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVG 378 (429)
T ss_dssp HHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh----hccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHH
Confidence 99999999999986 3444 5689999999999 99999999999999999998873 3355667899999
Q ss_pred HHHHHccCcchHHHhhhhHHHHHHHHHHHHHh-----cCCCH---HHHHHHHHHHHHc
Q 010976 257 LALQELSAIVPAREKQTIVRTAISKFRAAIQL-----QFDFH---RAIYNLGTVLYGL 306 (496)
Q Consensus 257 ~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l-----~P~~~---~a~~~lg~~~~~~ 306 (496)
.+|..+|++ ++|+..|++|+++ .|+++ .++.+|+.+...+
T Consensus 379 ~~~~~~g~~----------~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 379 KLQLHQGMF----------PQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHTTCH----------HHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCH----------HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 999999999 9999999999986 56665 4556677666544
No 208
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.66 E-value=7.4e-08 Score=99.20 Aligned_cols=97 Identities=12% Similarity=-0.005 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHH
Q 010976 185 LLEEACKKYDEATRL-----CPTL---HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL-NWNSPQALNNW 255 (496)
Q Consensus 185 ~~~~A~~~~~~Al~l-----~P~~---~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l-~P~~~~a~~~l 255 (496)
+|++|+..|++++++ .|++ ...+.+||.+|.. +|+|++|+.+|++++..+++.+.- +|+-...++||
T Consensus 313 ~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~----~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nL 388 (433)
T 3qww_A 313 SPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY----MQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKL 388 (433)
T ss_dssp CHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh----hcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 399999999999996 4444 5679999999999 999999999999999999988743 35566789999
Q ss_pred HHHHHHccCcchHHHhhhhHHHHHHHHHHHHHh-----cCCCHHH
Q 010976 256 GLALQELSAIVPAREKQTIVRTAISKFRAAIQL-----QFDFHRA 295 (496)
Q Consensus 256 g~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l-----~P~~~~a 295 (496)
|.+|..+|++ ++|+..|++|+++ .|+++..
T Consensus 389 a~~~~~qg~~----------~eA~~~~~~Al~i~~~~lG~~Hp~~ 423 (433)
T 3qww_A 389 GRLYMGLENK----------AAGEKALKKAIAIMEVAHGKDHPYI 423 (433)
T ss_dssp HHHHHHTTCH----------HHHHHHHHHHHHHHHHHTCTTCHHH
T ss_pred HHHHHhccCH----------HHHHHHHHHHHHHHHHHcCCCChHH
Confidence 9999999999 9999999999986 5777654
No 209
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.64 E-value=2e-07 Score=80.94 Aligned_cols=103 Identities=14% Similarity=0.015 Sum_probs=90.6
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhC-C-CCHHHHHHHHH
Q 010976 135 QRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC-P-TLHDAFYNWAI 212 (496)
Q Consensus 135 ~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~-P-~~~~a~~~lg~ 212 (496)
...+..+.+.|.+.+..++.+.++.+++|+++.+..+ ..++++++..++..++.+ | ++.+++|+||.
T Consensus 11 ~~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~-----------~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv 79 (152)
T 1pc2_A 11 VEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKY-----------NDDIRKGIVLLEELLPKGSKEEQRDYVFYLAV 79 (152)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSS-----------HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCC-----------HHHHHHHHHHHHHHHhcCCccchHHHHHHHHH
Confidence 3567788999999999999999999999999999883 122889999999999999 7 67899999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 010976 213 AISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLAL 259 (496)
Q Consensus 213 ~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l 259 (496)
.+++ +|+|++|+ .+++++|+++|+|.++...+-.+-
T Consensus 80 ~~~k----l~~Y~~A~-------~y~~~lL~ieP~n~QA~~Lk~~ie 115 (152)
T 1pc2_A 80 GNYR----LKEYEKAL-------KYVRGLLQTEPQNNQAKELERLID 115 (152)
T ss_dssp HHHH----TSCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHH----ccCHHHHH-------HHHHHHHhcCCCCHHHHHHHHHHH
Confidence 9999 99999999 899999999999999877655443
No 210
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.64 E-value=6.3e-08 Score=99.75 Aligned_cols=114 Identities=10% Similarity=-0.144 Sum_probs=95.1
Q ss_pred hHhhccHHHHHHHHHHHHHhC-----CCC---HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh----
Q 010976 132 RSRQRILTFAAKRYANAIERN-----PED---YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL---- 199 (496)
Q Consensus 132 ~~~~g~~~~Ai~~~~~al~~~-----P~~---~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l---- 199 (496)
+..+|+|++|+..|++++++. |++ ...+.++|.+|..+|+ |++|+.+|++++.+
T Consensus 297 ~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~--------------~~eA~~~~~~~L~i~~~~ 362 (429)
T 3qwp_A 297 LKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGL--------------LEEALFYGTRTMEPYRIF 362 (429)
T ss_dssp HHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHHHH
T ss_pred HHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhcc--------------HHHHHHHHHHHHHhHHHH
Confidence 446799999999999999763 444 5688999999999999 99999999999987
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcc
Q 010976 200 ----CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN-WNSPQALNNWGLALQELS 263 (496)
Q Consensus 200 ----~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~-P~~~~a~~~lg~~l~~~g 263 (496)
+|+....+++||.+|.. +|++++|+..|++|++.+++.+.-+ |....++.+|+.+..+++
T Consensus 363 lg~~Hp~~a~~l~nLa~~~~~----~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 427 (429)
T 3qwp_A 363 FPGSHPVRGVQVMKVGKLQLH----QGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANIR 427 (429)
T ss_dssp SCSSCHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHh
Confidence 44455679999999999 9999999999999999999887443 445566788888776654
No 211
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.59 E-value=9.1e-08 Score=98.51 Aligned_cols=98 Identities=13% Similarity=0.029 Sum_probs=83.6
Q ss_pred hhccHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh------
Q 010976 134 RQRILTFAAKRYANAIER-----NPED---YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL------ 199 (496)
Q Consensus 134 ~~g~~~~Ai~~~~~al~~-----~P~~---~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l------ 199 (496)
..|+|++|+..|++++++ .|++ ...+.++|.+|..+|+ |++|+.+|++++++
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~--------------~~eA~~~~~~aL~i~~~~lG 375 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQD--------------WEGALKYGQKIIKPYSKHYP 375 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHHSC
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcC--------------HHHHHHHHHHHHHHHHHHcC
Confidence 358999999999999986 3444 5678999999999999 99999999999987
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHH
Q 010976 200 --CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQA 251 (496)
Q Consensus 200 --~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a 251 (496)
+|+.+..++|||.+|.. +|++++|+..|++|++.+++.+ -|+++.+
T Consensus 376 ~~Hp~~a~~l~nLa~~~~~----qg~~~eA~~~~~~Al~i~~~~l--G~~Hp~~ 423 (433)
T 3qww_A 376 VYSLNVASMWLKLGRLYMG----LENKAAGEKALKKAIAIMEVAH--GKDHPYI 423 (433)
T ss_dssp SSCHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHT--CTTCHHH
T ss_pred CCChHHHHHHHHHHHHHHh----ccCHHHHHHHHHHHHHHHHHHc--CCCChHH
Confidence 45556679999999999 9999999999999999998875 4555543
No 212
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.56 E-value=2.7e-07 Score=73.74 Aligned_cols=72 Identities=15% Similarity=-0.026 Sum_probs=67.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHH
Q 010976 200 CPTLHDAFYNWAIAISDRAKMRGR---TKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVR 276 (496)
Q Consensus 200 ~P~~~~a~~~lg~~~~~~~~~~g~---~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~ 276 (496)
+|+++.++..+|.+++. .++ .++|. ..++++++++|+++.+++.+|.++++.|+| +
T Consensus 2 ~p~~~~~~~~~a~al~~----~~~~~~~~~A~-------~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y----------~ 60 (93)
T 3bee_A 2 NAVTATQLAAKATTLYY----LHKQAMTDEVS-------LLLEQALQLEPYNEAALSLIANDHFISFRF----------Q 60 (93)
T ss_dssp CCCCHHHHHHHHHHHHH----TTTTCCCHHHH-------HHHHHHHHHCTTCHHHHHHHHHHHHHTTCH----------H
T ss_pred CCCCHHHHHHHHHHHHH----hcCCCCCHHHH-------HHHHHHHHHCcCCHHHHHHHHHHHHHcCCH----------H
Confidence 68999999999999986 665 68888 899999999999999999999999999999 9
Q ss_pred HHHHHHHHHHHhcCCC
Q 010976 277 TAISKFRAAIQLQFDF 292 (496)
Q Consensus 277 ~Ai~~~~~Al~l~P~~ 292 (496)
+|+..|+++++.+|..
T Consensus 61 ~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 61 EAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHHHHHTCCCTT
T ss_pred HHHHHHHHHHhhCCCC
Confidence 9999999999999984
No 213
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.56 E-value=5.8e-07 Score=77.99 Aligned_cols=106 Identities=9% Similarity=0.010 Sum_probs=91.9
Q ss_pred hhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHHHhcC-C-CCHHHHHHHH
Q 010976 182 KDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRG---RTKEAEELWKQATKNYEKAVQLN-W-NSPQALNNWG 256 (496)
Q Consensus 182 ~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g---~~~eA~~~~~~A~~~~~~Al~l~-P-~~~~a~~~lg 256 (496)
..+.+..+.+.|.+.+..++.+.++.+++|.++.. .. +..+++ ..++..++.+ | ++.+++++||
T Consensus 10 ~~~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~----S~~~~~~~~gI-------~lLe~ll~~~~p~~~rd~lY~LA 78 (152)
T 1pc2_A 10 SVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVR----SKYNDDIRKGI-------VLLEELLPKGSKEEQRDYVFYLA 78 (152)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHT----CSSHHHHHHHH-------HHHHHHHHHSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHc----CCCHHHHHHHH-------HHHHHHHhcCCccchHHHHHHHH
Confidence 44568889999999999999999999999999998 77 444666 8999999988 7 6789999999
Q ss_pred HHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010976 257 LALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 257 ~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~ 308 (496)
..+.++|+| ++|+.+++++|+++|+|..+...+-.+-....+
T Consensus 79 v~~~kl~~Y----------~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~~k 120 (152)
T 1pc2_A 79 VGNYRLKEY----------EKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120 (152)
T ss_dssp HHHHHTSCH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCH----------HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 999999999 999999999999999999988877666555443
No 214
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.54 E-value=5.8e-07 Score=71.78 Aligned_cols=72 Identities=11% Similarity=-0.046 Sum_probs=68.0
Q ss_pred CCCCHHHHHHHHHHHHHccC---cchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCC
Q 010976 245 NWNSPQALNNWGLALQELSA---IVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPRE 321 (496)
Q Consensus 245 ~P~~~~a~~~lg~~l~~~g~---~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~ 321 (496)
+|+++..+..+|.+++..++ . ++|...+++||+++|+++.+++.+|.+++..|+
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~----------~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~------------- 58 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMT----------DEVSLLLEQALQLEPYNEAALSLIANDHFISFR------------- 58 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCC----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCC----------HHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCC-------------
Confidence 68999999999999987666 6 999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHhcCCcH
Q 010976 322 VSPNELYSQSAIYIAAAHALKPSY 345 (496)
Q Consensus 322 ~~~~~~~~~A~~~~~~a~~l~p~~ 345 (496)
|..|+.+|+++++.+|..
T Consensus 59 ------y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 59 ------FQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp ------HHHHHHHHHHHHTCCCTT
T ss_pred ------HHHHHHHHHHHHhhCCCC
Confidence 999999999999999984
No 215
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.52 E-value=2.8e-06 Score=92.26 Aligned_cols=169 Identities=10% Similarity=-0.024 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHH
Q 010976 138 LTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEAC-KKYDEATRLCPTLHDAFYNWAIAISD 216 (496)
Q Consensus 138 ~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~-~~~~~Al~l~P~~~~a~~~lg~~~~~ 216 (496)
.......|+++|...|.+++.|+..+..+...|+ .++|. +.|++|+..+|.+...|..++.....
T Consensus 325 ~~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~--------------~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~ 390 (679)
T 4e6h_A 325 KARMTYVYMQAAQHVCFAPEIWFNMANYQGEKNT--------------DSTVITKYLKLGQQCIPNSAVLAFSLSEQYEL 390 (679)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSC--------------CTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCc--------------HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 3456788999999999999999999999999999 88997 99999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHh----cCCC-----------CHHHHHHHHHHHHHccCcchHHH-----------
Q 010976 217 RAKMRGRTKEAEELWKQATKNYEKAVQ----LNWN-----------SPQALNNWGLALQELSAIVPARE----------- 270 (496)
Q Consensus 217 ~~~~~g~~~eA~~~~~~A~~~~~~Al~----l~P~-----------~~~a~~~lg~~l~~~g~~~~A~~----------- 270 (496)
.|++++|.+.|++++..+...+. -.|. ...+|..++.+..+.|..+.|+.
T Consensus 391 ----~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~ 466 (679)
T 4e6h_A 391 ----NTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKL 466 (679)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGG
T ss_pred ----hCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC
Confidence 99999999888888776543332 1253 34577888887777777733300
Q ss_pred --------------hh-hhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHH
Q 010976 271 --------------KQ-TIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYI 335 (496)
Q Consensus 271 --------------~~-~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~ 335 (496)
.. ++.+.|...|+++++..|+++..+...+......|+ ...|...|
T Consensus 467 ~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~-------------------~~~AR~lf 527 (679)
T 4e6h_A 467 VTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNE-------------------ESQVKSLF 527 (679)
T ss_dssp SCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC-------------------HHHHHHHH
T ss_pred CChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCC-------------------HHHHHHHH
Confidence 11 224555555555555555555555555555555544 56777778
Q ss_pred HHHHhcCC
Q 010976 336 AAAHALKP 343 (496)
Q Consensus 336 ~~a~~l~p 343 (496)
++++...|
T Consensus 528 eral~~~~ 535 (679)
T 4e6h_A 528 ESSIDKIS 535 (679)
T ss_dssp HHHTTTSS
T ss_pred HHHHHhcC
Confidence 88887776
No 216
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.51 E-value=3.3e-06 Score=91.69 Aligned_cols=170 Identities=9% Similarity=0.009 Sum_probs=129.4
Q ss_pred hhccHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh-----------CC
Q 010976 134 RQRILTFAA-KRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL-----------CP 201 (496)
Q Consensus 134 ~~g~~~~Ai-~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l-----------~P 201 (496)
..|+.++|+ ..|++|+..+|.+...|..++.+....|+ +++|.+.|++++.. .|
T Consensus 355 ~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~--------------~e~aR~iyek~l~~l~~~~~~~~~~~p 420 (679)
T 4e6h_A 355 EKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTK--------------IPEIETTILSCIDRIHLDLAALMEDDP 420 (679)
T ss_dssp HHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred hcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCC--------------HHHHHHHHHHHHHHHHHHhhhhhhccC
Confidence 357778897 99999999999999999999999999999 99999999999985 25
Q ss_pred C-----------CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH-----------------------------HHHHHHHH
Q 010976 202 T-----------LHDAFYNWAIAISDRAKMRGRTKEAEELWKQ-----------------------------ATKNYEKA 241 (496)
Q Consensus 202 ~-----------~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~-----------------------------A~~~~~~A 241 (496)
. ...+|..++..... .|..+.|...|.+ |...|+++
T Consensus 421 ~~~~~~~~~~~~~~~vWi~y~~~erR----~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~ 496 (679)
T 4e6h_A 421 TNESAINQLKSKLTYVYCVYMNTMKR----IQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELG 496 (679)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHH----HHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHH
T ss_pred cchhhhhhhccchHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 3 34467777776666 6777777644433 44455566
Q ss_pred HhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHcchhHHhccCCCC
Q 010976 242 VQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFD---FHRAIYNLGTVLYGLAEDTLRTGGTVN 318 (496)
Q Consensus 242 l~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~---~~~a~~~lg~~~~~~g~~~~a~~~~~~ 318 (496)
++..|+++..+...+......|+. +.|...|++|+...|+ ....|..+...-...|.
T Consensus 497 Lk~~p~~~~~w~~y~~fe~~~~~~----------~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~---------- 556 (679)
T 4e6h_A 497 LKYFATDGEYINKYLDFLIYVNEE----------SQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGS---------- 556 (679)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTCH----------HHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCC----------
T ss_pred HHHCCCchHHHHHHHHHHHhCCCH----------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCC----------
Confidence 666666666666666666666666 9999999999999883 45666666666667776
Q ss_pred CCCCCcHHHHHHHHHHHHHHHhcCCcHHHHHH
Q 010976 319 PREVSPNELYSQSAIYIAAAHALKPSYSVYSS 350 (496)
Q Consensus 319 ~~~~~~~~~~~~A~~~~~~a~~l~p~~~~y~~ 350 (496)
...+...+.++.+..|+.+....
T Consensus 557 ---------~~~~~~v~~R~~~~~P~~~~~~~ 579 (679)
T 4e6h_A 557 ---------LNSVRTLEKRFFEKFPEVNKLEE 579 (679)
T ss_dssp ---------SHHHHHHHHHHHHHSTTCCHHHH
T ss_pred ---------HHHHHHHHHHHHHhCCCCcHHHH
Confidence 57788899999999998764333
No 217
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.50 E-value=7.9e-07 Score=72.38 Aligned_cols=86 Identities=13% Similarity=0.111 Sum_probs=69.8
Q ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHH
Q 010976 203 LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKF 282 (496)
Q Consensus 203 ~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~ 282 (496)
++.-.+.+|..++. .|+|..|+..|++|+..+..--...+....++.+||.++.++|++ +.|+..+
T Consensus 4 sa~dc~~lG~~~~~----~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~----------~~A~~~~ 69 (104)
T 2v5f_A 4 TAEDCFELGKVAYT----EADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDL----------DKALLLT 69 (104)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCH----------HHHHHHH
T ss_pred CHHHHHHHHHHHHH----ccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCH----------HHHHHHH
Confidence 35567899999999 999999996555555544321111345688999999999999999 9999999
Q ss_pred HHHHHhcCCCHHHHHHHHHH
Q 010976 283 RAAIQLQFDFHRAIYNLGTV 302 (496)
Q Consensus 283 ~~Al~l~P~~~~a~~~lg~~ 302 (496)
+++++++|++..+..|++.+
T Consensus 70 ~~al~l~P~~~~~~~n~~~~ 89 (104)
T 2v5f_A 70 KKLLELDPEHQRANGNLKYF 89 (104)
T ss_dssp HHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHhcCCCCHHHHhhHHHH
Confidence 99999999999999999843
No 218
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.43 E-value=2.2e-06 Score=69.66 Aligned_cols=78 Identities=15% Similarity=0.067 Sum_probs=70.6
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHcCCHHHH
Q 010976 155 DYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC-------PTLHDAFYNWAIAISDRAKMRGRTKEA 227 (496)
Q Consensus 155 ~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~-------P~~~~a~~~lg~~~~~~~~~~g~~~eA 227 (496)
++.-.+.+|..++..++ |..|+..|++|++.. +....++.+||.++.. +|++++|
T Consensus 4 sa~dc~~lG~~~~~~~~--------------y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~----~g~~~~A 65 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEAD--------------YYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ----QGDLDKA 65 (104)
T ss_dssp CHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH----TTCHHHH
T ss_pred CHHHHHHHHHHHHHccc--------------hHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH----ccCHHHH
Confidence 45667899999999999 999999999999973 3467899999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 010976 228 EELWKQATKNYEKAVQLNWNSPQALNNWGL 257 (496)
Q Consensus 228 ~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 257 (496)
+ ..++++++++|++..+++|++.
T Consensus 66 ~-------~~~~~al~l~P~~~~~~~n~~~ 88 (104)
T 2v5f_A 66 L-------LLTKKLLELDPEHQRANGNLKY 88 (104)
T ss_dssp H-------HHHHHHHHHCTTCHHHHHHHHH
T ss_pred H-------HHHHHHHhcCCCCHHHHhhHHH
Confidence 9 8999999999999999999983
No 219
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.90 E-value=0.00061 Score=71.20 Aligned_cols=146 Identities=10% Similarity=-0.004 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--
Q 010976 138 LTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAIS-- 215 (496)
Q Consensus 138 ~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~-- 215 (496)
.......|++++...|..+..|...+..+...|+ .++|...|++|+.. |.+...++..+....
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~--------------~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~ 259 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQ--------------KEKAKKVVERGIEM-SDGMFLSLYYGLVMDEE 259 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHhC-CCcHHHHHHHHhhcchh
Confidence 4556789999999999999999999999999999 99999999999999 998776665544310
Q ss_pred ----HHHHHc--CC--------HHHH-------------HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcc-Ccch
Q 010976 216 ----DRAKMR--GR--------TKEA-------------EELWKQATKNYEKAVQLNWNSPQALNNWGLALQELS-AIVP 267 (496)
Q Consensus 216 ----~~~~~~--g~--------~~eA-------------~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g-~~~~ 267 (496)
..+... .. .... ...++.|...|.+| ...+.....|...+.+-...+ +.
T Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~-- 336 (493)
T 2uy1_A 260 AVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSR-- 336 (493)
T ss_dssp HHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCS--
T ss_pred HHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCCh--
Confidence 000000 00 0000 01123455788888 433345667777777777666 47
Q ss_pred HHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchh
Q 010976 268 AREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAED 309 (496)
Q Consensus 268 A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~ 309 (496)
+.|...|+++++..|+.+..+...+......|+.
T Consensus 337 --------~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~ 370 (493)
T 2uy1_A 337 --------ATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDE 370 (493)
T ss_dssp --------HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCH
T ss_pred --------HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCH
Confidence 9999999999999999998877777777777763
No 220
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.90 E-value=9.3e-05 Score=61.83 Aligned_cols=103 Identities=13% Similarity=0.012 Sum_probs=87.7
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhC-C-CCHHHHHHHHH
Q 010976 135 QRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC-P-TLHDAFYNWAI 212 (496)
Q Consensus 135 ~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~-P-~~~~a~~~lg~ 212 (496)
...+..+...|.+.+..++...++.+++|+++..... ..+..++|..++..+.-+ | ..-+.+|.||.
T Consensus 14 ~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~-----------~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAv 82 (126)
T 1nzn_A 14 VEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRY-----------NDDIRKGIVLLEELLPKGSKEEQRDYVFYLAV 82 (126)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSS-----------HHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCC-----------HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Confidence 3566778889999999899999999999999998776 223555999999999887 5 56789999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 010976 213 AISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLAL 259 (496)
Q Consensus 213 ~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l 259 (496)
.+++ +|+|.+|+ .+++..|+.+|+|.++......+-
T Consensus 83 g~yk----lg~Y~~A~-------~~~~~lL~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 83 GNYR----LKEYEKAL-------KYVRGLLQTEPQNNQAKELERLID 118 (126)
T ss_dssp HHHH----TTCHHHHH-------HHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHH----hhhHHHHH-------HHHHHHHHhCCCCHHHHHHHHHHH
Confidence 9999 99999999 899999999999999887665543
No 221
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.78 E-value=0.00024 Score=59.37 Aligned_cols=101 Identities=10% Similarity=0.035 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcC-C-CCHHHHHHHHHHHHHcc
Q 010976 186 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLN-W-NSPQALNNWGLALQELS 263 (496)
Q Consensus 186 ~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~-P-~~~~a~~~lg~~l~~~g 263 (496)
+..+.+.|.+.+..++...++.+++|.++.. ..+..+- +++|..++..+..+ | ..-.+++.||..++++|
T Consensus 17 l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~----S~~~~d~----~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg 88 (126)
T 1nzn_A 17 LLKFEKKFQSEKAAGSVSKSTQFEYAWCLVR----TRYNDDI----RKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLK 88 (126)
T ss_dssp HHHHHHHHHHHHHHSCCCHHHHHHHHHHHTT----SSSHHHH----HHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccCCCcHHHHHHHHHHHHc----CCCHHHH----HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhh
Confidence 7778889999999889999999999999988 7766551 24448888888876 5 57789999999999999
Q ss_pred CcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 010976 264 AIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLY 304 (496)
Q Consensus 264 ~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~ 304 (496)
+| .+|+.+++..|+++|+|..+......+--
T Consensus 89 ~Y----------~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~ 119 (126)
T 1nzn_A 89 EY----------EKALKYVRGLLQTEPQNNQAKELERLIDK 119 (126)
T ss_dssp CH----------HHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 99 99999999999999999988776555543
No 222
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.50 E-value=0.022 Score=59.40 Aligned_cols=179 Identities=9% Similarity=-0.050 Sum_probs=133.5
Q ss_pred hHhhccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCC-CCHHHHHH
Q 010976 132 RSRQRILTFAAKRYANAIERN-PEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCP-TLHDAFYN 209 (496)
Q Consensus 132 ~~~~g~~~~Ai~~~~~al~~~-P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P-~~~~a~~~ 209 (496)
+.+.|++++|+..|++..+.. .-+...|..+-.+|...+. .......+.+++|.+.|++.....- -+...|..
T Consensus 36 c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~-----~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~ 110 (501)
T 4g26_A 36 CSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEA-----ATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTN 110 (501)
T ss_dssp TTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCC-----CSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCc-----hhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 467899999999999988764 2255666666555554443 1223345678999999999887632 26778899
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHH
Q 010976 210 WAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL--NWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQ 287 (496)
Q Consensus 210 lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l--~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~ 287 (496)
+-.+|.. .|++++|. ..|++..+. .| +...|+.+-..|.+.|+. ++|...|++..+
T Consensus 111 lI~~~~~----~g~~~~A~-------~l~~~M~~~g~~P-d~~tyn~lI~~~~~~g~~----------~~A~~l~~~M~~ 168 (501)
T 4g26_A 111 GARLAVA----KDDPEMAF-------DMVKQMKAFGIQP-RLRSYGPALFGFCRKGDA----------DKAYEVDAHMVE 168 (501)
T ss_dssp HHHHHHH----HTCHHHHH-------HHHHHHHHTTCCC-CHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHH
T ss_pred HHHHHHh----cCCHHHHH-------HHHHHHHHcCCCC-ccceehHHHHHHHHCCCH----------HHHHHHHHHHHh
Confidence 9999999 99999999 566665544 34 678899999999999999 999999999987
Q ss_pred hcC-CCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHh--cCCcHHHHHHHHHhhh
Q 010976 288 LQF-DFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHA--LKPSYSVYSSALRLVR 356 (496)
Q Consensus 288 l~P-~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~--l~p~~~~y~~al~~~~ 356 (496)
..- -+...|..|-.+|.+.|+ .++|..++++... ..|+...|......+.
T Consensus 169 ~G~~Pd~~ty~~Li~~~~~~g~-------------------~d~A~~ll~~Mr~~g~~ps~~T~~~l~~~F~ 221 (501)
T 4g26_A 169 SEVVPEEPELAALLKVSMDTKN-------------------ADKVYKTLQRLRDLVRQVSKSTFDMIEEWFK 221 (501)
T ss_dssp TTCCCCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHHTSSBCHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHhhCCC-------------------HHHHHHHHHHHHHhCCCcCHHHHHHHHHHHh
Confidence 632 246788889999999998 6777777776644 5677776665555443
No 223
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=97.50 E-value=5.1e-05 Score=67.49 Aligned_cols=105 Identities=12% Similarity=0.186 Sum_probs=68.4
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccc---cC
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSAC---AD 440 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 440 (496)
++.|||..............|.++||+|+...|..+....... ......-.|+|.++..|+.+ .+
T Consensus 4 ikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~------------~~~~~~G~I~L~~~~~ve~~~~~~~ 71 (169)
T 1btk_A 4 ILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERG------------RRGSKKGSIDVEKITCVETVVPEKN 71 (169)
T ss_dssp CEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTT------------EEEEEEEEEEGGGEEEEEECCCCSS
T ss_pred EEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccC------------CCCceeeEEECcceEEEEeccCCCC
Confidence 4577877653222222235799999999988777765421000 00123568888888777655 22
Q ss_pred CC--CC-----------CC--------CeeeEeecCCceeeeecChhhhhhHHHHHHHHHH
Q 010976 441 LT--LP-----------PG--------AGLCIETIHGPVFLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 441 ~~--~~-----------~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
.+ .+ +| +.|.|-|.....||.|+|.+++++|++||+-+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~aI~~~i~ 132 (169)
T 1btk_A 72 PPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIR 132 (169)
T ss_dssp CCGGGCC---------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred cchhcccccccCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 11 11 11 6788877766779999999999999999997753
No 224
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.46 E-value=0.0031 Score=65.74 Aligned_cols=187 Identities=6% Similarity=0.023 Sum_probs=120.4
Q ss_pred HHHHHHHHHHhhccchhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHH
Q 010976 114 NNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKY 193 (496)
Q Consensus 114 ~~~A~~~~~~~l~~~~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 193 (496)
.+.|-..|.+++...+. ++++.+...|++++...| +.+.|..+.......+. ..+.....|
T Consensus 11 i~~aR~vyer~l~~~P~-----~~~e~~~~iferal~~~p-s~~LW~~Y~~f~~~~~~-------------~~~~i~~~f 71 (493)
T 2uy1_A 11 LSSPSAIMEHARRLYMS-----KDYRSLESLFGRCLKKSY-NLDLWMLYIEYVRKVSQ-------------KKFKLYEVY 71 (493)
T ss_dssp -CCHHHHHHHHHHHHHT-----TCHHHHHHHHHHHSTTCC-CHHHHHHHHHHHHHHC-----------------CTHHHH
T ss_pred hHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHhccCC-CHHHHHHHHHHHHHhCc-------------hHHHHHHHH
Confidence 55566677777766643 789999999999999989 88899988888877664 034566788
Q ss_pred HHHHHh---CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHH-HH-------------
Q 010976 194 DEATRL---CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNN-WG------------- 256 (496)
Q Consensus 194 ~~Al~l---~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~-lg------------- 256 (496)
++|+.. +|.+...|......+...-...++.+.+. ..|++||..-+.+..-++. ..
T Consensus 72 e~al~~vg~d~~s~~iW~~Yi~f~~~~~~~~~~~~~vR-------~iy~rAL~~P~~~~~~lw~~Y~~fE~~~~~~~~~~ 144 (493)
T 2uy1_A 72 EFTLGQFENYWDSYGLYKEYIEEEGKIEDEQTRIEKIR-------NGYMRALQTPMGSLSELWKDFENFELELNKITGKK 144 (493)
T ss_dssp HHHHHHSTTCTTCHHHHHHHHHHTSSCSSHHHHHHHHH-------HHHHHHHTSCCTTHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHcCCCcccHHHHHHHHHHHHhchhhhHHHHHHH-------HHHHHHHhChhhhHHHHHHHHHHHHHHhccccHHH
Confidence 888875 78888888887665431000023444444 6666666642222221111 00
Q ss_pred ---------------------------------HHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 010976 257 ---------------------------------LALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVL 303 (496)
Q Consensus 257 ---------------------------------~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~ 303 (496)
.+-+..++.. .....+..+.....|++++...|.++..|++.+..+
T Consensus 145 ~~~~~~~~y~~ar~~y~~~~~~~~~~s~~~W~~y~~~E~~~~~-~~~~~~~~~Rv~~~ye~al~~~p~~~~lW~~ya~~~ 223 (493)
T 2uy1_A 145 IVGDTLPIFQSSFQRYQQIQPLIRGWSVKNAARLIDLEMENGM-KLGGRPHESRMHFIHNYILDSFYYAEEVYFFYSEYL 223 (493)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCTT-CCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHhcCCc-cCcchhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 0001111100 000001134567899999999999999999999999
Q ss_pred HHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHHH
Q 010976 304 YGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSV 347 (496)
Q Consensus 304 ~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~ 347 (496)
...|+ ...|...|++|+.. |....
T Consensus 224 ~~~~~-------------------~~~ar~i~erAi~~-P~~~~ 247 (493)
T 2uy1_A 224 IGIGQ-------------------KEKAKKVVERGIEM-SDGMF 247 (493)
T ss_dssp HHTTC-------------------HHHHHHHHHHHHHH-CCSSH
T ss_pred HHcCC-------------------HHHHHHHHHHHHhC-CCcHH
Confidence 98887 67888899999999 87663
No 225
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=97.42 E-value=0.00011 Score=64.84 Aligned_cols=101 Identities=16% Similarity=0.143 Sum_probs=69.1
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCC-
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLT- 442 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 442 (496)
+..|+|..............|.++||+|....|..+...... ......|+|..+..|+.+.+..
T Consensus 16 i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~---------------~~~~G~I~L~~~~~v~~~~~~~~ 80 (164)
T 2lul_A 16 ILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEK---------------KYRKGFIDVSKIKCVEIVKNDDG 80 (164)
T ss_dssp EEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSS---------------CCCCCEEEGGGCCEEEECCCCSS
T ss_pred eEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCcc---------------cccccEEEEeeeEEEEecccccc
Confidence 446777655433333334469999999988777765321110 1224468888888887666532
Q ss_pred ---CCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHH
Q 010976 443 ---LPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 443 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
....+.|.|.|.....||.|+|.++++.|++||+-|.
T Consensus 81 ~~~~~~~~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i 120 (164)
T 2lul_A 81 VIPCQNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEI 120 (164)
T ss_dssp SCCSSSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CcccccceeEEEecCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 2356778888766666999999999999999998764
No 226
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.41 E-value=0.00053 Score=59.82 Aligned_cols=118 Identities=7% Similarity=-0.077 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC---------HHHHHHHHHHHHHHHHHcCCHHHH
Q 010976 157 DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL---------HDAFYNWAIAISDRAKMRGRTKEA 227 (496)
Q Consensus 157 ~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~---------~~a~~~lg~~~~~~~~~~g~~~eA 227 (496)
.+++.....++..+. |+.|+-....++.+..++ ..+++.+|.+++. .++|..|
T Consensus 21 ~~l~dqik~L~d~~L--------------Y~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~----~~eyrrA 82 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGL--------------HSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFH----DKEYRNA 82 (167)
T ss_dssp CCHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH----TTCHHHH
T ss_pred HHHHHHHHHHHHhhh--------------HHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHc----ccHHHHH
Confidence 345556666777777 999999999988874332 3478999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHhcC------------------CCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhc
Q 010976 228 EELWKQATKNYEKAVQLN------------------WNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ 289 (496)
Q Consensus 228 ~~~~~~A~~~~~~Al~l~------------------P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~ 289 (496)
...|++|+...+...+.. +...+..+.++.||.++|++ ++|+..++..- ..
T Consensus 83 ~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~----------~~Ai~~Le~Ip-~k 151 (167)
T 3ffl_A 83 VSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQD----------KDAIAILDGIP-SR 151 (167)
T ss_dssp HHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCH----------HHHHHHHHTSC-GG
T ss_pred HHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCH----------HHHHHHHhcCC-ch
Confidence 999999888776433221 22347899999999999999 99998876531 12
Q ss_pred CCCHHHHHHHHHHH
Q 010976 290 FDFHRAIYNLGTVL 303 (496)
Q Consensus 290 P~~~~a~~~lg~~~ 303 (496)
-..+.+...||.+|
T Consensus 152 ~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 152 QRTPKINMLLANLY 165 (167)
T ss_dssp GCCHHHHHHHHHHC
T ss_pred hcCHHHHHHHHHHh
Confidence 34577777777765
No 227
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.36 E-value=0.00028 Score=57.83 Aligned_cols=106 Identities=15% Similarity=0.222 Sum_probs=74.5
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCC
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLT 442 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
-+..|+|..... ....|.++||+|....|..+..... ......|+|..+..|+.+.+..
T Consensus 8 ~~~~G~L~K~~~-----~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~~v~~~~~~~ 66 (115)
T 2dn6_A 8 VLKQGYMMKKGH-----RRKNWTERWFVLKPNIISYYVSEDL----------------KDKKGDILLDENCCVESLPDKD 66 (115)
T ss_dssp CSEEEEEEEECT-----TSSCEEEEEEEECSSCEEEESSTTC----------------SSEEEEECCCTTCEEEEECCCT
T ss_pred ceEEEEEEecCC-----CCCCcEEeEEEEECCEEEEeCCCCC----------------cccCcEEEecCcEEEEECCCCC
Confidence 345677765421 2357999999998776665442211 1235678888877777654432
Q ss_pred CCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHHHhhcccchh
Q 010976 443 LPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTIYARGKADVL 490 (496)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 490 (496)
...+.|.|.+.....||.|+|.++++.|++||+.+......|..-..
T Consensus 67 -~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~~~~~~~ 113 (115)
T 2dn6_A 67 -GKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLKLGSSGPS 113 (115)
T ss_dssp -TCCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred -CCeeEEEEEeCCCEEEEEcCCHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 34578888876555699999999999999999999998887765443
No 228
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.27 E-value=0.00018 Score=60.61 Aligned_cols=101 Identities=16% Similarity=0.222 Sum_probs=63.7
Q ss_pred hhccccCCCCCCCCCChhhhhhhccccch--hh-hhhhccccccccccccCCCCCCCCCCCceeeeecCceeeccccc-C
Q 010976 365 KAGYLTAPPAGIPVAPHSDWKRSQFVLNH--EG-LQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACA-D 440 (496)
Q Consensus 365 ~~g~l~~~~~~~~~~~~~~~~~~~~~l~~--~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 440 (496)
..|||...... ....|.++||+|+. .. |.....+..-. ......-.|+|..+..|..+. .
T Consensus 17 ~~G~L~K~g~~----~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~------------~~~~~~G~I~L~~~~~V~~~~~~ 80 (126)
T 1v5p_A 17 ICGFLDIEDNE----NSGKFLRRYFILDTQANCLLWYMDNPQNLA------------VGAGAVGSLQLTYISKVSIATPK 80 (126)
T ss_dssp EECCEEEECTT----CSSCEEEEEEEEETTTTEEEEESSCTTTSC------------TTCCCSEEEETTTCCEEEECCTT
T ss_pred eEEEEEEeCCC----CCCCccceEEEEecCCCCEEEEECCCCCCC------------CCceeeEEEECCCccEEecCCcc
Confidence 46888765321 24589999999983 22 33322211000 001235578888877777664 2
Q ss_pred CCCCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHH
Q 010976 441 LTLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTI 481 (496)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 481 (496)
...-..++|.|.|..-.-||.|+|.++++.|++||+-+..|
T Consensus 81 ~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~~~ 121 (126)
T 1v5p_A 81 QKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQASKS 121 (126)
T ss_dssp TSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHTTTT
T ss_pred cCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 22235577877765555699999999999999999976543
No 229
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.26 E-value=0.0028 Score=54.19 Aligned_cols=128 Identities=12% Similarity=0.071 Sum_probs=91.7
Q ss_pred HhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHHHHHc
Q 010976 150 ERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL--------HDAFYNWAIAISDRAKMR 221 (496)
Q Consensus 150 ~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~--------~~a~~~lg~~~~~~~~~~ 221 (496)
-+.|++++.|......+...|+ ....+.+++-+..|++|+..-|-. ...|.+.+.. .. .
T Consensus 7 ~~~p~~yd~W~~yl~llE~~g~--------p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~e----i 73 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLEKNSV--------PLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KA----I 73 (161)
T ss_dssp ---CCSHHHHHHHHHHHHHHTC--------SCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HH----H
T ss_pred eeCCCCHHHHHHHHHHHHHcCC--------CchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HH----h
Confidence 4689999999999999999888 111133488899999999986642 2334444322 23 6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 010976 222 GRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGT 301 (496)
Q Consensus 222 g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~ 301 (496)
++.++|. +.|+.++.+...++..|...|..-.++|+. ..|...+.+|+.+.|.....+ ..+.
T Consensus 74 ~D~d~aR-------~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl----------~kARkILg~AiG~~~k~~~~l-e~a~ 135 (161)
T 4h7y_A 74 QEPDDAR-------DYFQMARANCKKFAFVHISFAQFELSQGNV----------KKSKQLLQKAVERGAVPLEML-EIAL 135 (161)
T ss_dssp HCGGGCH-------HHHHHHHHHCTTBHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHTTCBCHHHH-HHHH
T ss_pred cCHHHHH-------HHHHHHHHHhHHHHHHHHHHHHHHHHcccH----------HHHHHHHHHHhccCCCcHHHH-HHHH
Confidence 7777777 677777777777889999999988888888 999999999999999865533 3344
Q ss_pred HHHHcch
Q 010976 302 VLYGLAE 308 (496)
Q Consensus 302 ~~~~~g~ 308 (496)
.-.+.|+
T Consensus 136 ~nl~~~~ 142 (161)
T 4h7y_A 136 RNLNLQK 142 (161)
T ss_dssp HHHHTTC
T ss_pred HhhhcCC
Confidence 4444443
No 230
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.18 E-value=0.0051 Score=51.51 Aligned_cols=101 Identities=13% Similarity=0.085 Sum_probs=80.2
Q ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHH
Q 010976 136 RILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT-LHDAFYNWAIAI 214 (496)
Q Consensus 136 g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~ 214 (496)
.++....+.|.+-+ ...-.+.+.+++|+++....+ ..+..++|..++..++.+|. .-+.+|.||..+
T Consensus 21 eeL~~l~~qy~~E~-~~~vs~qt~F~yAw~Lv~S~~-----------~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~ 88 (134)
T 3o48_A 21 QQLEILRQQVVSEG-GPTATIQSRFNYAWGLIKSTD-----------VNDERLGVKILTDIYKEAESRRRECLYYLTIGC 88 (134)
T ss_dssp HHHHHHHHHHHHTT-GGGSCHHHHHHHHHHHHHSSC-----------HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-CCCCChhhHHHHHHHHHcCCC-----------HHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH
Confidence 34455555555544 223367899999999998876 23477899999999999984 578999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 010976 215 SDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLAL 259 (496)
Q Consensus 215 ~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l 259 (496)
++ +|+|.+|. .+.+..|+.+|+|.++......+-
T Consensus 89 yk----lgdY~~Ar-------~y~d~lL~~eP~N~QA~~Lk~~Ie 122 (134)
T 3o48_A 89 YK----LGEYSMAK-------RYVDTLFEHERNNKQVGALKSMVE 122 (134)
T ss_dssp HH----HTCHHHHH-------HHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HH----hhhHHHHH-------HHHHHHHhhCCCCHHHHHHHHHHH
Confidence 99 99999999 899999999999999877665544
No 231
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.11 E-value=0.0071 Score=51.27 Aligned_cols=100 Identities=13% Similarity=0.081 Sum_probs=79.2
Q ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHH
Q 010976 137 ILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT-LHDAFYNWAIAIS 215 (496)
Q Consensus 137 ~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~ 215 (496)
++......|.+-+. +.-..++.+++|+++..... ..+..++|..++..+.-.|. .-+.+|.||..++
T Consensus 21 eL~~lr~qY~~E~~-~~vs~~t~F~YAw~Lv~S~~-----------~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~y 88 (144)
T 1y8m_A 21 QLEILRQQVVSEGG-PTATIQSRFNYAWGLIKSTD-----------VNDERLGVKILTDIYKEAESRRRECLYYLTIGCY 88 (144)
T ss_dssp HHHHHHHHHHHTTS-TTSCHHHHHHHHHHHHHSSS-----------HHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc-CCCcHHHHHHHHHHHHcCCC-----------HHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHH
Confidence 34444455544312 35578999999999999876 33467899999999999984 6689999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 010976 216 DRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLAL 259 (496)
Q Consensus 216 ~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l 259 (496)
+ +|+|.+|. .+.+..|+.+|+|.++......+-
T Consensus 89 k----l~~Y~~Ar-------~y~d~lL~~eP~n~QA~~Lk~~Ie 121 (144)
T 1y8m_A 89 K----LGEYSMAK-------RYVDTLFEHERNNKQVGALKSMVE 121 (144)
T ss_dssp T----TTCHHHHH-------HHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred H----hhhHHHHH-------HHHHHHHhcCCCcHHHHHHHHHHH
Confidence 9 99999999 899999999999998876655443
No 232
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.09 E-value=0.00053 Score=56.32 Aligned_cols=94 Identities=18% Similarity=0.193 Sum_probs=64.6
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccc--hhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCC
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLN--HEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL 441 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
...|+|..... ....|.++||+|. ...|..+..... ....-.|+|..+..+.++...
T Consensus 9 ~~~G~L~K~g~-----~~~~Wk~R~fvL~~~~~~L~yy~~~~~----------------~~~~g~i~L~~~~~v~~~~~~ 67 (117)
T 1v5u_A 9 SYEGILYKKGA-----FMKPWKARWFVLDKTKHQLRYYDHRMD----------------TECKGVIDLAEVEAVAPGTPT 67 (117)
T ss_dssp SEEEEEEECCC-----SSSCCEEEEEEEETTTTEEEEESSSSC----------------SSCCCEEEGGGEEEEECCCCC
T ss_pred cEEEEEEecCC-----CCCCceeeEEEEECCCCEEEEeecCCC----------------CccceEEEccCcEEEeecCcc
Confidence 45677765532 2458999999998 445555432211 123557888888888766542
Q ss_pred -CC----CCCCeeeEeecCCceeeeecChhhhhhHHHHHHHH
Q 010976 442 -TL----PPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLV 478 (496)
Q Consensus 442 -~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 478 (496)
.. ...++|.|.|.....||.|+|.++++.|++||+-+
T Consensus 68 ~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~ 109 (117)
T 1v5u_A 68 IGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSC 109 (117)
T ss_dssp TTSCSSSCTTTCEEEEESSCEEEEECSSHHHHHHHHHHHHTT
T ss_pred ccccccCCCCeEEEEECCCceEEEECCCHHHHHHHHHHHHHH
Confidence 22 24578999765555689999999999999999753
No 233
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.04 E-value=0.00043 Score=60.00 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=65.5
Q ss_pred hhhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCC
Q 010976 362 PYLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL 441 (496)
Q Consensus 362 ~~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
+.++.|||.... .....|+++||+|....|..+...... ...-.|+|.....+.. .+.
T Consensus 17 pv~keG~L~Kkg-----~~~k~WkrRWFvLk~~~L~Yyk~~~d~----------------~~~g~I~L~~~~~~~~-~~~ 74 (149)
T 1x1f_A 17 PLYFEGFLLIKR-----SGYREYEHYWTELRGTTLFFYTDKKSI----------------IYVDKLDIVDLTCLTE-QNS 74 (149)
T ss_dssp CEEEEEEEEEEC-----TTCCSCEEEEEEEETTEEEEESCSSCS----------------SCSEECCCSSCCEEEE-CCC
T ss_pred CccEEEEEEEeC-----CCCCCceeEEEEEcCCEEEEEeCCCcc----------------ccCcEEECCCceEEee-ccC
Confidence 356688887653 233689999999987766654432221 1124666666554411 111
Q ss_pred CCCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHH
Q 010976 442 TLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTI 481 (496)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 481 (496)
.-...+.|+|.|.....+|.|+|.++++.|+.||+-|..+
T Consensus 75 ~~~~~~~F~I~t~~r~~~f~A~s~ee~~eWi~aI~~v~~~ 114 (149)
T 1x1f_A 75 TEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTEL 114 (149)
T ss_dssp TTSCCCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHS
T ss_pred CCCcCcEEEEEcCCCEEEEEcCCHHHHHHHHHHHHHHHcc
Confidence 1124678999887777799999999999999999977654
No 234
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.98 E-value=0.0011 Score=54.11 Aligned_cols=97 Identities=22% Similarity=0.288 Sum_probs=66.4
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCC
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL 443 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
+..|+|.... .....|.++||+|....|..+..... ......|+|..+..+.++.+. -
T Consensus 6 ~~~G~L~K~g-----~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~~~~~~~~~-~ 63 (113)
T 1pls_A 6 IREGYLVKKG-----SVFNTWKPMWVVLLEDGIEFYKKKSD----------------NSPKGMIPLKGSTLTSPCQDF-G 63 (113)
T ss_dssp SEEEEEEEES-----SSSSCCEEEEEEEETTEEEEESSTTC----------------SSCSEEEESSSCCEESSCCSS-C
T ss_pred cEEEEEEEeC-----CCCCCceEEEEEEECCEEEEEeCCCC----------------CCcceEEEcCCCEEEEecCCC-C
Confidence 3467776442 12457999999998777666443211 123557888877776654432 2
Q ss_pred CCCCeeeEeecCCce-eeeecChhhhhhHHHHHHHHHHHH
Q 010976 444 PPGAGLCIETIHGPV-FLVADSWEALDGWLDAIRLVYTIY 482 (496)
Q Consensus 444 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~ 482 (496)
...++|.|.|..+.+ ||.|+|.++++.|++||+.+..-.
T Consensus 64 ~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~ 103 (113)
T 1pls_A 64 KRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKCI 103 (113)
T ss_dssp CSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHhcc
Confidence 356788888776554 899999999999999999876543
No 235
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.97 E-value=0.0037 Score=54.46 Aligned_cols=101 Identities=13% Similarity=0.050 Sum_probs=74.9
Q ss_pred HhhccHHHHHHHHHHHHHhCCCC---------HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhC---
Q 010976 133 SRQRILTFAAKRYANAIERNPED---------YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLC--- 200 (496)
Q Consensus 133 ~~~g~~~~Ai~~~~~al~~~P~~---------~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~--- 200 (496)
+..+.|+.|+-....++.+..++ ..++..+|.+++..++ |.+|...|++||++.
T Consensus 31 ~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~e--------------yrrA~~~y~qALq~~k~l 96 (167)
T 3ffl_A 31 AAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKE--------------YRNAVSKYTMALQQKKAL 96 (167)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHHCC
T ss_pred HHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccH--------------HHHHHHHHHHHHHHHHHH
Confidence 34678888998888877664333 3478999999999999 999999999998772
Q ss_pred ---CC-------------------CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 010976 201 ---PT-------------------LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLA 258 (496)
Q Consensus 201 ---P~-------------------~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~ 258 (496)
+. +.+..|.++.||.. ++++.+|+ ..++ .|-..-..+.....||.+
T Consensus 97 ~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~----l~~~~~Ai-------~~Le-~Ip~k~Rt~kvnm~LakL 164 (167)
T 3ffl_A 97 SKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTV----LKQDKDAI-------AILD-GIPSRQRTPKINMLLANL 164 (167)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHH----TTCHHHHH-------HHHH-TSCGGGCCHHHHHHHHHH
T ss_pred hcCCCccccccccCCCcccccccchHHHHHHHHHHHHH----HCCHHHHH-------HHHh-cCCchhcCHHHHHHHHHH
Confidence 11 12688999999999 99999999 3433 332233466777777766
Q ss_pred H
Q 010976 259 L 259 (496)
Q Consensus 259 l 259 (496)
|
T Consensus 165 y 165 (167)
T 3ffl_A 165 Y 165 (167)
T ss_dssp C
T ss_pred h
Confidence 5
No 236
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=96.95 E-value=0.0003 Score=58.61 Aligned_cols=98 Identities=21% Similarity=0.331 Sum_probs=68.3
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCC
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLT 442 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.+..|+|.... .....|.++||+|....|..+..... ......|+|.++..|..|....
T Consensus 14 ~~~~G~L~K~g-----~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~l~~~~~v~~~~~~~ 72 (125)
T 1eaz_A 14 VIKAGYCVKQG-----AVMKNWKRRYFQLDENTIGYFKSELE----------------KEPLRVIPLKEVHKVQECKQSD 72 (125)
T ss_dssp CSEEEEEEEEC-----TTTCCEEEEEEEECSSEEEEESSTTC----------------SSCSEEEEGGGCCEEEECTTHH
T ss_pred ccEEEEEEEeC-----CCCCCcceEEEEEeCCEEEEEcCCCC----------------CcceeEEEcccceEEeeccccc
Confidence 35578876552 13457999999998776665433221 1235578888888777654322
Q ss_pred C-CCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHH
Q 010976 443 L-PPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTI 481 (496)
Q Consensus 443 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 481 (496)
. ...++|.|.|.....||.|+|.++++.|++||+.+...
T Consensus 73 ~~~~~~~F~i~~~~r~~~l~a~s~~e~~~W~~al~~~i~~ 112 (125)
T 1eaz_A 73 IMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVA 112 (125)
T ss_dssp HHTCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cCCcCCEEEEEeCCcEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 2 35678888865555689999999999999999987654
No 237
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.95 E-value=0.011 Score=50.19 Aligned_cols=87 Identities=15% Similarity=0.151 Sum_probs=75.1
Q ss_pred CCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHcchhHHhccCCCCCCCCC
Q 010976 245 NWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFD-FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVS 323 (496)
Q Consensus 245 ~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~ 323 (496)
+.-+.++.++++.++....+. .+..++|..++..++.+|. .-+.+|.|+..++++|+
T Consensus 35 ~~vs~~t~F~YAw~Lv~S~~~-------~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~--------------- 92 (144)
T 1y8m_A 35 PTATIQSRFNYAWGLIKSTDV-------NDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGE--------------- 92 (144)
T ss_dssp TTSCHHHHHHHHHHHHHSSSH-------HHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTC---------------
T ss_pred CCCcHHHHHHHHHHHHcCCCH-------HHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhh---------------
Confidence 356899999999999998876 5668999999999999884 56799999999999999
Q ss_pred cHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhhhc
Q 010976 324 PNELYSQSAIYIAAAHALKPSYSVYSSALRLVRS 357 (496)
Q Consensus 324 ~~~~~~~A~~~~~~a~~l~p~~~~y~~al~~~~~ 357 (496)
|..|..|.+..++.+|++........++.+
T Consensus 93 ----Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie~ 122 (144)
T 1y8m_A 93 ----YSMAKRYVDTLFEHERNNKQVGALKSMVED 122 (144)
T ss_dssp ----HHHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 999999999999999999976666555443
No 238
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.91 E-value=0.0097 Score=49.80 Aligned_cols=84 Identities=15% Similarity=0.171 Sum_probs=73.0
Q ss_pred CCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcH
Q 010976 247 NSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFD-FHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPN 325 (496)
Q Consensus 247 ~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~ 325 (496)
-.+++.++++.++.+..+. .+...+|..++..++.+|. .-+.+|.|+..++++|+
T Consensus 38 vs~qt~F~yAw~Lv~S~~~-------~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgd----------------- 93 (134)
T 3o48_A 38 ATIQSRFNYAWGLIKSTDV-------NDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGE----------------- 93 (134)
T ss_dssp SCHHHHHHHHHHHHHSSCH-------HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTC-----------------
T ss_pred CChhhHHHHHHHHHcCCCH-------HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhh-----------------
Confidence 3789999999999998775 5667999999999999984 47899999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHhhh
Q 010976 326 ELYSQSAIYIAAAHALKPSYSVYSSALRLVR 356 (496)
Q Consensus 326 ~~~~~A~~~~~~a~~l~p~~~~y~~al~~~~ 356 (496)
|..|..|.+..++.+|++........++.
T Consensus 94 --Y~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie 122 (134)
T 3o48_A 94 --YSMAKRYVDTLFEHERNNKQVGALKSMVE 122 (134)
T ss_dssp --HHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Confidence 99999999999999999997666555544
No 239
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.82 E-value=0.001 Score=53.96 Aligned_cols=93 Identities=15% Similarity=0.146 Sum_probs=62.3
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCC
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLT 442 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
-...|+|.... .....|.++||+|....|..+..... ......|+|..+..+....+.
T Consensus 8 ~~~~G~L~K~~-----~~~~~Wk~RwfvL~~~~L~yyk~~~~----------------~~~~~~i~L~~~~~~~~~~~~- 65 (109)
T 1wgq_A 8 STMSGYLYRSK-----GSKKPWKHLWFVIKNKVLYTYAASED----------------VAALESQPLLGFTVTLVKDEN- 65 (109)
T ss_dssp CSCEEEEEEES-----STTSCCEEEEEEEETTEEEEESCTTC----------------SSCSEEEECSSEEEEECCCSS-
T ss_pred CeEEEEEEeCC-----CCCCCceeEEEEEeCCEEEEECCCCc----------------CccCceEECCCCEEEECCCCC-
Confidence 34567776542 22458999999998766665433221 123456777776655543222
Q ss_pred CCCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHH
Q 010976 443 LPPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLV 478 (496)
Q Consensus 443 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~ 478 (496)
...++|.|.+..+. .||.|+|.++++.|++||+.+
T Consensus 66 -~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a 101 (109)
T 1wgq_A 66 -SESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEG 101 (109)
T ss_dssp -CSSSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred -CCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHH
Confidence 24578888866555 589999999999999999875
No 240
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.77 E-value=0.0024 Score=52.31 Aligned_cols=96 Identities=18% Similarity=0.240 Sum_probs=62.4
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCC
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL 443 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
+..|+|.... .....|.++||+|....|..+..... ......|+|.....++...+..-
T Consensus 9 ~~~G~L~K~g-----~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~v~~~~~~~~~ 67 (118)
T 1v89_A 9 IKMGWLKKQR-----SIVKNWQQRYFVLRAQQLYYYKDEED----------------TKPQGCMYLPGCTIKEIATNPEE 67 (118)
T ss_dssp EEEEEEEEEC-----SSSSCEEEEEEEEETTEEEEESSSSC----------------CSCSEEECSTTEEEEEECCCSSC
T ss_pred cEEEEEEecC-----CCCCCccEEEEEEECCEEEEEeCCCC----------------CCceEEEECCCCEEEEcCcCccc
Confidence 4567776542 12347999999998776666433221 12344667766554433333334
Q ss_pred CCCCeeeEeec-------CCc-eeeeecChhhhhhHHHHHHHHHH
Q 010976 444 PPGAGLCIETI-------HGP-VFLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 444 ~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
+..++|.|.+. .+. .||.|+|.++++.|++||+.+..
T Consensus 68 ~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 68 AGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp CCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 56788888872 333 48999999999999999998753
No 241
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.76 E-value=0.093 Score=54.63 Aligned_cols=147 Identities=11% Similarity=-0.009 Sum_probs=113.0
Q ss_pred hhhhcHHHHHHHHHHhhccc----hh-------hh---------HhhccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHH
Q 010976 109 QLAEQNNAAMELINSVTGVD----EE-------GR---------SRQRILTFAAKRYANAIERN-PEDYDALYNWALVLQ 167 (496)
Q Consensus 109 ~~~~~~~~A~~~~~~~l~~~----~~-------~~---------~~~g~~~~Ai~~~~~al~~~-P~~~~a~~~lg~~~~ 167 (496)
...|+.++|+.++..+.... .. ++ ...+.+++|...|++..... .-+...|..+-..|.
T Consensus 37 ~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~ 116 (501)
T 4g26_A 37 SKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAV 116 (501)
T ss_dssp TTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred HhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 35677888888887766532 00 11 12356899999999987764 236788999999999
Q ss_pred HhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc--
Q 010976 168 ESADNVSLDSTSPSKDALLEEACKKYDEATRLC-PTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQL-- 244 (496)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~-P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l-- 244 (496)
+.|+ +++|.+.|++..+.. .-+...|..+-.+|.. .|+.++|. +.|++..+.
T Consensus 117 ~~g~--------------~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~----~g~~~~A~-------~l~~~M~~~G~ 171 (501)
T 4g26_A 117 AKDD--------------PEMAFDMVKQMKAFGIQPRLRSYGPALFGFCR----KGDADKAY-------EVDAHMVESEV 171 (501)
T ss_dssp HHTC--------------HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHTTC
T ss_pred hcCC--------------HHHHHHHHHHHHHcCCCCccceehHHHHHHHH----CCCHHHHH-------HHHHHHHhcCC
Confidence 9999 999999999988762 2267788888889999 99999999 566665544
Q ss_pred CCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHh--cCC
Q 010976 245 NWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL--QFD 291 (496)
Q Consensus 245 ~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l--~P~ 291 (496)
.| +...|+.+-.+|.+.|+. ++|...|++.-+. .|+
T Consensus 172 ~P-d~~ty~~Li~~~~~~g~~----------d~A~~ll~~Mr~~g~~ps 209 (501)
T 4g26_A 172 VP-EEPELAALLKVSMDTKNA----------DKVYKTLQRLRDLVRQVS 209 (501)
T ss_dssp CC-CHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHTSSBC
T ss_pred CC-CHHHHHHHHHHHhhCCCH----------HHHHHHHHHHHHhCCCcC
Confidence 34 678899999999999999 9999999987664 454
No 242
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.76 E-value=0.023 Score=48.52 Aligned_cols=125 Identities=10% Similarity=0.032 Sum_probs=94.0
Q ss_pred HhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC--------CHHHHHHHHHHHHHccCcchHH
Q 010976 198 RLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN--------SPQALNNWGLALQELSAIVPAR 269 (496)
Q Consensus 198 ~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~--------~~~a~~~lg~~l~~~g~~~~A~ 269 (496)
-+.|++++.|......+.. .|+...- ..+++-++.|++|+..-|- +...|.+.+.. ...++.
T Consensus 7 ~~~p~~yd~W~~yl~llE~----~g~p~~d-~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~---- 76 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLEK----NSVPLSD-ALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEP---- 76 (161)
T ss_dssp ---CCSHHHHHHHHHHHHH----HTCSCCH-HHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCG----
T ss_pred eeCCCCHHHHHHHHHHHHH----cCCCchh-hHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCH----
Confidence 3689999999999988888 7888211 3344444788888765543 45566666654 455777
Q ss_pred HhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHhcCCcHH-HH
Q 010976 270 EKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYS-VY 348 (496)
Q Consensus 270 ~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~-~y 348 (496)
++|.+.|+.++++...++.+|...+..-..+|+ ...|...+.+|+.+.|... ..
T Consensus 77 ------d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgn-------------------l~kARkILg~AiG~~~k~~~~l 131 (161)
T 4h7y_A 77 ------DDARDYFQMARANCKKFAFVHISFAQFELSQGN-------------------VKKSKQLLQKAVERGAVPLEML 131 (161)
T ss_dssp ------GGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHHHHTTCBCHHHH
T ss_pred ------HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHccc-------------------HHHHHHHHHHHhccCCCcHHHH
Confidence 999999999999999998899988888888888 7889999999999998755 56
Q ss_pred HHHHHhhhc
Q 010976 349 SSALRLVRS 357 (496)
Q Consensus 349 ~~al~~~~~ 357 (496)
..+++.++.
T Consensus 132 e~a~~nl~~ 140 (161)
T 4h7y_A 132 EIALRNLNL 140 (161)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHhhhc
Confidence 666666544
No 243
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.74 E-value=0.00043 Score=58.49 Aligned_cols=96 Identities=18% Similarity=0.320 Sum_probs=58.2
Q ss_pred hhhccccCCCCCCCCCChhhhhhhcccc-chhhhhhhccccccccccccCCCCCCCCCCCceeeeecC-ceeec---ccc
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVL-NHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVP-DIVSV---SAC 438 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~ 438 (496)
+..|+|.... .....|+++||+| ....|..+...... ...-.|++. ++..+ ..|
T Consensus 9 ~~~G~L~K~g-----~~~k~WkkRwFVL~~~~~L~Yyk~~~~~----------------~~~g~i~l~~~~~~i~~~~~~ 67 (130)
T 2d9v_A 9 VRGGWLWRQS-----SILRRWKRNWFALWLDGTLGYYHDETAQ----------------DEEDRVVIHFNVRDIKVGQEC 67 (130)
T ss_dssp EEEEEEEEEC-----SSSCCEEEEEEEEETTTEEEEESSSSTT----------------SEEEEEECTTTEEEEEEGGGC
T ss_pred eEEEEEEeec-----CccCCceeeEEEEccCCEEEEEeCCCCC----------------CcCceEecccceeEEeccccc
Confidence 4577776552 1235899999999 55555554322211 011122222 12222 234
Q ss_pred cCCCC----CCCCeeeEeecCCce-eeeecChhhhhhHHHHHHHHHH
Q 010976 439 ADLTL----PPGAGLCIETIHGPV-FLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 439 ~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
.++.. ...+.|.|.|.++.+ ||.|+|.++++.|+.||+-+..
T Consensus 68 ~~v~~~~~~~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 68 QDVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp SSCCCCSSCCTTTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCCCcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 44332 245789888766655 8999999999999999998754
No 244
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.67 E-value=0.0019 Score=52.88 Aligned_cols=91 Identities=10% Similarity=0.140 Sum_probs=63.6
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCC
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLT 442 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.+..|+|..... .....|.++||+|....|..+..... ......|+|..+..|++..
T Consensus 8 ~~~~G~L~K~~~----~~~~~WkkR~fvL~~~~L~yy~~~~~----------------~~~~g~i~l~~~~~v~~~~--- 64 (115)
T 2cod_A 8 KVKSGWLDKLSP----QGKRMFQKRWVKFDGLSISYYNNEKE----------------MYSKGIIPLSAISTVRVQG--- 64 (115)
T ss_dssp CCEEEEEEECCS----SSSSCCEEEEEEECSSEEEEEESSCC----------------SSCCCEEETTTEEEEEEET---
T ss_pred ccEEEEEEEcCC----CCCCCCceEEEEEECCEEEEEcCCCC----------------cccCCEEECCcceEEEeCC---
Confidence 345788775422 12347999999998776665443222 1234568888877777543
Q ss_pred CCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHH
Q 010976 443 LPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
.++|.|.|.....||.|+|.++++.|++||+.+.
T Consensus 65 ---~~~F~i~~~~r~~~l~a~s~~e~~~Wi~~l~~~~ 98 (115)
T 2cod_A 65 ---DNKFEVVTTQRTFVFRVEKEEERNDWISILLNAL 98 (115)
T ss_dssp ---TTEEEEEESSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred ---CCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 5788888655556899999999999999999764
No 245
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=96.53 E-value=0.0016 Score=53.00 Aligned_cols=95 Identities=20% Similarity=0.266 Sum_probs=55.3
Q ss_pred hhhccccCCCCCCCCCChhhhhhhcccc-chhhhhhhccccccccccccCCCCCCCCCCCceeeeecCcee----ecccc
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVL-NHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIV----SVSAC 438 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 438 (496)
...|+|..... ....|.++||+| ....|..+..... ......|++.... .+..|
T Consensus 6 ~~~G~L~K~g~-----~~k~WkkR~fvL~~~~~L~yyk~~~~----------------~~~~g~i~l~~~~i~l~~~~~v 64 (112)
T 3aj4_A 6 VKSGWLLRQST-----ILKRWKKNWFDLWSDGHLIYYDDQTR----------------QNIEDKVHMPMDCINIRTGQEC 64 (112)
T ss_dssp SEEEEEEEECS-----SSCCEEEEEEEECTTSEEEEESSTTC----------------CSEEEEEEHHHHEEEEEEGGGC
T ss_pred eEEEEEEeeCC-----CCCCeeceEEEEeeCCEEEEEcCCCC----------------CCCCccccccccceeecccccc
Confidence 34677765421 345899999999 5545544332211 1122334444211 11122
Q ss_pred cCCCCC----CCCeeeEeecCCce-eeeecChhhhhhHHHHHHHHH
Q 010976 439 ADLTLP----PGAGLCIETIHGPV-FLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 439 ~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~ 479 (496)
..+..+ ..++|.|.+..+.+ ||.|+|.++++.|++||+-+.
T Consensus 65 ~~v~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 65 RDTQPPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp CSCCCSTTCCGGGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCcCcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 222222 24578887655554 899999999999999998764
No 246
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=96.48 E-value=0.0021 Score=53.58 Aligned_cols=97 Identities=18% Similarity=0.240 Sum_probs=66.6
Q ss_pred hhhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCC
Q 010976 362 PYLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL 441 (496)
Q Consensus 362 ~~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
.....|+|.... .....|.++||+|....|..+..... ......|+|..+..|.+..+.
T Consensus 17 ~~~~~G~L~K~g-----~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~~v~~~~~~ 75 (126)
T 1fao_A 17 LGTKEGYLTKQG-----GLVKTWKTRWFTLHRNELKYFKDQMS----------------PEPIRILDLTECSAVQFDYSQ 75 (126)
T ss_dssp TTCEEEEEEEEC-----SSSCCEEEEEEEEETTEEEEESSTTC----------------SSCSEEEEGGGCCEEEEECSS
T ss_pred CccEEEEEEEcC-----CCCCCcccEEEEEECCEEEEeCCCCC----------------CCceeEEEccceEEEEecccC
Confidence 446678887653 13457999999998776666442221 123556888877766654322
Q ss_pred CCCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHH
Q 010976 442 TLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTI 481 (496)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 481 (496)
...++|.|.|.....||.|+|.++++.|++||+-+..-
T Consensus 76 --~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 113 (126)
T 1fao_A 76 --ERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQ 113 (126)
T ss_dssp --SSSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred --CCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 24567888865555699999999999999999976543
No 247
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=96.48 E-value=0.0025 Score=51.47 Aligned_cols=94 Identities=20% Similarity=0.253 Sum_probs=57.2
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccchh--hhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCC
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHE--GLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL 441 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
+..|+|..... ....|.++||+|... .|..+..... ......|+|....-.......
T Consensus 8 ~~~G~L~K~g~-----~~~~Wk~R~fvL~~~~~~L~yyk~~~~----------------~~~~g~i~L~~~~v~~~~~~~ 66 (109)
T 2i5f_A 8 IKQGCLLKQGH-----RRKNWKVRKFILREDPAYLHYYDPAGA----------------EDPLGAIHLRGCVVTSVESNS 66 (109)
T ss_dssp EEEEEEEEECT-----TTCCEEEEEEEEETTTTEEEEECTTSC----------------SSCSEEEECTTCEEEEECC--
T ss_pred eEEEEEEEcCC-----CCCCceEEEEEEeCCCcEEEEECCCCC----------------CCccEEEECCCCEEEEccCCc
Confidence 45677765421 234699999999864 4444322111 123445677663211111111
Q ss_pred ---CCCCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHH
Q 010976 442 ---TLPPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLV 478 (496)
Q Consensus 442 ---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~ 478 (496)
.....++|.|.|..+. .+|.|+|.++++.|++||+.+
T Consensus 67 ~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~ 107 (109)
T 2i5f_A 67 NGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMA 107 (109)
T ss_dssp ------CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHH
T ss_pred ccccCCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence 1126688999887766 588999999999999999865
No 248
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.47 E-value=0.0048 Score=50.81 Aligned_cols=107 Identities=19% Similarity=0.226 Sum_probs=72.6
Q ss_pred hhhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCC
Q 010976 362 PYLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL 441 (496)
Q Consensus 362 ~~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
..++.|+|...+...... .|+++||+|-...-.-+...|-....- ..+.| ......|.|.|=++|.+...-
T Consensus 11 ~~vk~G~L~~q~q~~fgk---KWrk~w~vLy~~S~~GvaRLE~yd~~e--k~~r~----~~~rrVIrLsdCisV~~~~~e 81 (127)
T 2d9w_A 11 GAVKQGFLYLQQQQTFGK---KWRRFGASLYGGSDCALARLELQEGPE--KPRRC----EAARKVIRLSDCLRVAEAGGE 81 (127)
T ss_dssp CSSEEEEEEECBCSSSSC---BCCEEEEEEECCSSSSCCEEEEECCCS--CSSSC----SCCEEEECGGGEEEEEECCSC
T ss_pred ccccceEEEecccchhhh---hhheeEEEEecCCCCCceeeeeeeccC--ccccC----CCCceEEEhhhCCeEecccCc
Confidence 346678888776433332 599999999766555544444432110 00111 134689999999999998776
Q ss_pred -CCC-CCCeeeEeecCCceeeeecChhhhhhHHHHHHHH
Q 010976 442 -TLP-PGAGLCIETIHGPVFLVADSWEALDGWLDAIRLV 478 (496)
Q Consensus 442 -~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 478 (496)
+-| -.++|+|.|-....+|-|.+ ..++.|..+|-.+
T Consensus 82 ~~~pk~~~aF~l~T~er~~~laAe~-~E~~~Wi~~ic~~ 119 (127)
T 2d9w_A 82 ASSPRDTSAFFLETKERLYLLAAPA-AERGDWVQAICLL 119 (127)
T ss_dssp SSSCSSCEEEEEEESSCEEEEEECH-HHHHHHHHHHHHH
T ss_pred cCCCCcceEEEEEeCCcEEEEEeCc-HHHHHHHHHHHHH
Confidence 667 55789999877766666665 5899999999765
No 249
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=96.44 E-value=0.0036 Score=52.19 Aligned_cols=97 Identities=13% Similarity=0.210 Sum_probs=62.0
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeeccccc-CC
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACA-DL 441 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 441 (496)
.+..|+|..... .....|.++||+|....|..+..... ....-.|+|..+ .|..+. .-
T Consensus 21 ~~~~G~L~K~~~----~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~-~v~~~~~~~ 79 (128)
T 2dkp_A 21 VVRRGWLYKQDS----TGMKLWKKRWFVLSDLCLFYYRDEKE----------------EGILGSILLPSF-QIALLTSED 79 (128)
T ss_dssp CCEEEEEEEECC----SSSCCEEEEEEEEETTEEEEESSTTC----------------CSEEEEECGGGS-EEEECCGGG
T ss_pred cEEEEEEEEeCC----CCCCCceeEEEEEeCCEEEEECCCCC----------------cccceEEEcCce-EEEEcCCcc
Confidence 356788865432 12457999999998766665432221 122445666544 233222 12
Q ss_pred CCCCCCeeeEeecCC-ceeeeecChhhhhhHHHHHHHHHH
Q 010976 442 TLPPGAGLCIETIHG-PVFLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 442 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
.....++|.|.+..+ ..||.|+|.++++.|++||+.+..
T Consensus 80 ~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 80 HINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp CCSSCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred cCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 335668888887654 459999999999999999987754
No 250
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.39 E-value=0.0041 Score=51.36 Aligned_cols=99 Identities=17% Similarity=0.192 Sum_probs=64.9
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccchh--hhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccC
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHE--GLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD 440 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
-...|+|...... .....|.++||+|... .|..+..... ....-.|+|..+..+...
T Consensus 8 ~~~~G~L~K~g~~---~~~k~WkkRwfvL~~~~~~L~Yy~~~~~----------------~~~~g~I~L~~~~~~~~~-- 66 (119)
T 2dhk_A 8 KKLCGYLSKFGGK---GPIRGWKSRWFFYDERKCQLYYSRTAQD----------------ANPLDSIDLSSAVFDCKA-- 66 (119)
T ss_dssp CCCEEEEEECSCS---SSSCCCEEEEEEEETTTTEEEEESSTTC----------------CSCSEEEEGGGCEEEECT--
T ss_pred CcEEEEEEecCCC---CCCCCceeEEEEEECCccEEEEECCCCC----------------cccccEEECCCCEEEecC--
Confidence 3456777655321 1245899999999876 4555432221 123456777777666431
Q ss_pred CCCCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHHHhh
Q 010976 441 LTLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTIYAR 484 (496)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 484 (496)
-...+.|.|.|..-..||.|+|.++++.|++||+.+.+-+..
T Consensus 67 --~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 108 (119)
T 2dhk_A 67 --DAEEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMKRWEFHN 108 (119)
T ss_dssp --TGGGCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHhcC
Confidence 124568888866444479999999999999999988766654
No 251
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=96.33 E-value=0.0024 Score=53.37 Aligned_cols=98 Identities=19% Similarity=0.231 Sum_probs=61.3
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccchh--hhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccC
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHE--GLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD 440 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
-+..|+|..... ....|.++||+|... -|..+..... ......|+|....-+.....
T Consensus 18 ~~~~G~L~K~g~-----~~~~Wk~R~fvL~~~~~~L~yy~~~~~----------------~~~~g~i~L~~~~v~~~~~~ 76 (129)
T 1x05_A 18 IIKQGCLLKQGH-----RRKNWKVRKFILREDPAYLHYYDPAGA----------------EDPLGAIHLRGCVVTSVESN 76 (129)
T ss_dssp EEEEEEEEECCS-----SCCCCEEEEEEEEETTTEEEEECSSCC----------------SSCSEEEECTTCEEEECCCC
T ss_pred ceEEEEEEecCC-----CCCCCeeEEEEEeCCCCEEEEECCCCC----------------CcceeEEEccCCEEEEccCC
Confidence 455788876522 234699999999864 3444322111 12344677765332222111
Q ss_pred C---CCCCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHHHHH
Q 010976 441 L---TLPPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLVYTI 481 (496)
Q Consensus 441 ~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~ 481 (496)
. .....+.|.|.|..+. .||.|+|.++++.|++||..+...
T Consensus 77 ~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 121 (129)
T 1x05_A 77 SNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRT 121 (129)
T ss_dssp CCSSSCSSCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred ccccccCCCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHc
Confidence 1 1125688888877665 589999999999999999987653
No 252
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=96.32 E-value=0.0052 Score=50.74 Aligned_cols=97 Identities=21% Similarity=0.230 Sum_probs=61.8
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccC-C
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD-L 441 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 441 (496)
-+..|+|...... ....|.++||+|....|..+..... ......|+|..+ .|..+.. .
T Consensus 11 ~~~~G~L~K~~~~----~~~~WkkR~fvL~~~~L~yy~~~~~----------------~~~~g~i~l~~~-~v~~~~~~~ 69 (123)
T 1upq_A 11 VHIRGWLHKQDSS----GLRLWKRRWFVLSGHCLFYYKDSRE----------------ESVLGSVLLPSY-NIRPDGPGA 69 (123)
T ss_dssp EEEEEEEEEECSS----SSCCEEEEEEEEETTEEEEESSTTC----------------CSCCEEEEGGGC-EEEECCSSC
T ss_pred ceEEEEEEeeCCC----CCCCceeEEEEEeCCEEEEECCCCC----------------cccceEEECCCC-EEEECCCCc
Confidence 3457888755321 2347999999998766665432221 112445666654 2433332 2
Q ss_pred CCCCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHHHH
Q 010976 442 TLPPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 442 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
.....+.|.|.+..+. .||.|+|.++++.|++||..+..
T Consensus 70 ~~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 109 (123)
T 1upq_A 70 PRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASR 109 (123)
T ss_dssp TTSSSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cCCCcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHHh
Confidence 2336778888766544 48899999999999999998764
No 253
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.28 E-value=0.0039 Score=51.44 Aligned_cols=96 Identities=20% Similarity=0.237 Sum_probs=61.1
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccC-C
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD-L 441 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 441 (496)
-...|+|..... .....|.++||+|....|..+..... ......|+|.++. |..+.. -
T Consensus 22 ~~~~G~L~K~~~----~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~-v~~~~~~~ 80 (122)
T 2yry_A 22 VTKAGWLFKQAS----SGVKQWNKRWFVLVDRCLFYYKDEKE----------------ESILGSIPLLSFR-VAAVQPSD 80 (122)
T ss_dssp EEEEEEEEEECC----SSSCCEEEEEEEEETTEEEEESSTTC----------------CSCCEEEESTTCC-CEECCTTC
T ss_pred ccEEEEEEEECC----CCCCCcEEEEEEEeCCEEEEECCCCC----------------CCcccEEEcCCCE-EEEcCccc
Confidence 355788865421 12357999999998766665432221 1224466776643 332221 2
Q ss_pred CCCCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHHH
Q 010976 442 TLPPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 442 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
.....++|.|.+..+. .||.|+|.++++.|++||+.+.
T Consensus 81 ~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 119 (122)
T 2yry_A 81 NISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAA 119 (122)
T ss_dssp SCSSSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCCcccEEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 3345678888655544 4899999999999999998764
No 254
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.28 E-value=0.0055 Score=50.07 Aligned_cols=96 Identities=20% Similarity=0.237 Sum_probs=60.8
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccC-C
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD-L 441 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 441 (496)
-+..|+|..... .....|.++||+|....|..+..... ......|+|.++. |..+.. -
T Consensus 11 ~~~~G~L~K~~~----~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~-v~~~~~~~ 69 (117)
T 2d9y_A 11 VTKAGWLFKQAS----SGVKQWNKRWFVLVDRCLFYYKDEKE----------------ESILGSIPLLSFR-VAAVQPSD 69 (117)
T ss_dssp CCEEEEEEEECT----TSSSCEEEEEEEEETTEEEEESSTTC----------------CSCCEEEECSSCE-EEECCTTT
T ss_pred eeEEEEEEEeCC----CCCCCceEEEEEECCCEEEEECCCCC----------------CCcCCEEEeCCeE-EEEcCccc
Confidence 345777765421 12357999999998766665432211 1224467776644 222211 2
Q ss_pred CCCCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHHH
Q 010976 442 TLPPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 442 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
..+..++|.|.+..+. .||.|+|.++++.|++||+.+.
T Consensus 70 ~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 108 (117)
T 2d9y_A 70 NISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAA 108 (117)
T ss_dssp TCCCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred cCCCccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 3446678888655544 5899999999999999998764
No 255
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=96.23 E-value=0.0019 Score=50.85 Aligned_cols=89 Identities=17% Similarity=0.157 Sum_probs=53.9
Q ss_pred hccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCCC
Q 010976 366 AGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPP 445 (496)
Q Consensus 366 ~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (496)
.|+|.... .....|.++||+|....|..+....... ......|++..+..+.. -..
T Consensus 4 ~G~L~K~g-----~~~k~WkkR~FvL~~~~L~Yy~~~~~~~--------------~~~~~~i~l~~~~~~~~-----~~~ 59 (94)
T 2rsg_A 4 CGVLSKWT-----NYIHGWQDRWVVLKNNALSYYKSEDETE--------------YGCRGSICLSKAVITPH-----DFD 59 (94)
T ss_dssp EEEEEEES-----SSTTCEEEEEEEEETTEEEEESSTTGGG--------------TCCSEEEETTTCEEEEC-----SSC
T ss_pred EEEEEEeC-----CCCCCceEEEEEEECCEEEEEEeccccc--------------ccceeeEecceeeeecC-----ccc
Confidence 56665431 2234799999999887776654332211 01123344443222111 124
Q ss_pred CCeeeEeecCCceeeeecChhhhhhHHHHHHHH
Q 010976 446 GAGLCIETIHGPVFLVADSWEALDGWLDAIRLV 478 (496)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 478 (496)
.+.|.+.+.....||.|+|.++++.|++||..+
T Consensus 60 ~~~F~i~~~~r~~~l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 60 ECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp SSEEEEEETTEEEEEECCSSCCTHHHHHHHHHH
T ss_pred ceeEEEEeCCeEEEEECCCHHHHHHHHHHHHhh
Confidence 567888765444589999999999999999864
No 256
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=96.18 E-value=0.0056 Score=49.06 Aligned_cols=82 Identities=10% Similarity=0.133 Sum_probs=55.0
Q ss_pred hhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccC--CCCCCCCeeeEeecCCc-e
Q 010976 382 SDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD--LTLPPGAGLCIETIHGP-V 458 (496)
Q Consensus 382 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~ 458 (496)
..|.++||+|....|..+..... ......|+|..+.. ..+.+ ......++|.|.+..+. .
T Consensus 21 ~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~v-~~~~~~~~~~~~~~~F~i~~~~~r~~ 83 (108)
T 1u5d_A 21 SEWQKRWCVVSRGLFYYYANEKS----------------KQPKGTFLIKGYSV-RMAPHLRRDSKKESCFELTSQDRRTY 83 (108)
T ss_dssp EEEEEEEEEEETTEEEEESSTTC----------------SSCSEEEECTTCEE-EECGGGCSSGGGGGEEEEECSSSCCE
T ss_pred cCceeeEEEEeCCEEEEecCCCC----------------CCCCEEEEecceEE-EeCCccccccCCcceEEEEcCCCcEE
Confidence 58999999998766665432221 12344577766653 22221 22235678888877644 5
Q ss_pred eeeecChhhhhhHHHHHHHHHH
Q 010976 459 FLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 459 ~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
+|.|+|.++++.|++||+.+..
T Consensus 84 ~l~a~s~~e~~~Wi~ai~~~i~ 105 (108)
T 1u5d_A 84 EFTATSPAEARDWVDQISFLLK 105 (108)
T ss_dssp EEECSSHHHHHHHHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHHHHHH
Confidence 8999999999999999997754
No 257
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.16 E-value=0.0055 Score=51.62 Aligned_cols=93 Identities=14% Similarity=0.129 Sum_probs=57.6
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCC
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLT 442 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
-+..|+|.... ....|.++||+|....|..+-.... ......|+|....-++ ..+
T Consensus 8 v~k~GwL~K~g------~~k~WkrRWfVLk~~~L~yyk~~~~----------------~~p~G~I~L~~~~v~~---~~~ 62 (130)
T 1v88_A 8 IVMADWLKIRG------TLKSWTKLWCVLKPGVLLIYKTQKN----------------GQWVGTVLLNACEIIE---RPS 62 (130)
T ss_dssp CCEEEEEEECC------SSSSCEEEEEEEETTEEEEESCSSS----------------CCCCEEEECSSCEECC---CCT
T ss_pred eEEEeEEEEeC------CCCCceEEEEEEECCEEEEECCCCC----------------CCceEEEEcCCCEEEE---CCC
Confidence 45678887642 3458999999998766665433222 1224456665433211 122
Q ss_pred CCCCCeeeEeecCC-----------------------c-eeeeecChhhhhhHHHHHHHHHH
Q 010976 443 LPPGAGLCIETIHG-----------------------P-VFLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 443 ~~~~~~~~~~~~~~-----------------------~-~~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
-..++.|.|-+... . .||.|+|.++++.|++||+.+..
T Consensus 63 ~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~ 124 (130)
T 1v88_A 63 KKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALK 124 (130)
T ss_dssp TTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred CCCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 23456777653221 1 36899999999999999998763
No 258
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=96.09 E-value=0.0038 Score=59.43 Aligned_cols=97 Identities=20% Similarity=0.225 Sum_probs=65.0
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccchh-------hhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecc
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHE-------GLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVS 436 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~-------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
...|||... ..|+++||+|... .|..+....... . ........|+|.++.+|.
T Consensus 11 ~k~G~L~K~---------K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~------~-----~~~~p~g~I~L~~~~~V~ 70 (264)
T 1qqg_A 11 RKVGYLRKP---------KSMHKRFFVLRAASEAGGPARLEYYENEKKWR------H-----KSSAPKRSIPLESCFNIN 70 (264)
T ss_dssp EEEEEEECT---------TTCCEEEEEEECCBTTTBSSEEEEESSHHHHH------T-----TCSCCSEEEEGGGEEEEE
T ss_pred cEEEEEEEC---------CCCEeEEEEEECCCCCCCCCEEEEECCCcccc------c-----cccCcceEEEeeceEEEE
Confidence 457887654 4899999999766 444432221100 0 001245678999888887
Q ss_pred cccCCCCCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHHH
Q 010976 437 ACADLTLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTIY 482 (496)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 482 (496)
+..+ -...+.|.|.|.....||.|+|.++++.|++||.-+..=.
T Consensus 71 ~~~~--~~~~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 71 KRAD--SKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp EECC--SSCSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred eccC--CCCCcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 6654 2356788888776666999999999999999999875543
No 259
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.09 E-value=0.0073 Score=49.83 Aligned_cols=99 Identities=15% Similarity=0.235 Sum_probs=61.8
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccch--hhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCC
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNH--EGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL 441 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
...|+|.... .....|.++||+|.. ..|..+....... ....-.|+|..+. |.+..
T Consensus 9 ~~~G~L~K~~-----~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~--------------~~~~g~I~L~~~~-v~~~~-- 66 (120)
T 2d9x_A 9 NVYGYLMKYT-----NLVTGWQYRFFVLNNEAGLLEYFVNEQSRN--------------QKPRGTLQLAGAV-ISPSD-- 66 (120)
T ss_dssp CCEEEEEEEE-----ETTTEEEEEEEEECTTTCEEEEESSGGGSS--------------SCCSEEEECTTCC-EECCS--
T ss_pred cEEEEEEecC-----CCCCCceEEEEEEECCCCEEEEEecCcccC--------------CCccceEEcceEE-EEecC--
Confidence 3467765442 124579999999974 3444433222210 0123456666543 33211
Q ss_pred CCCCCCeeeEeecCCce-eeeecChhhhhhHHHHHHHHHHHHhhcc
Q 010976 442 TLPPGAGLCIETIHGPV-FLVADSWEALDGWLDAIRLVYTIYARGK 486 (496)
Q Consensus 442 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 486 (496)
..++.|.|.|..+.+ ||.|+|.++++.|++||+.+......+.
T Consensus 67 --~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~~ 110 (120)
T 2d9x_A 67 --EDSHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQHHTEAI 110 (120)
T ss_dssp --SSSSCEEECCSSSCCEEECCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred --CCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHHhhhhh
Confidence 245788888766554 8889999999999999998877665544
No 260
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.07 E-value=0.004 Score=50.29 Aligned_cols=90 Identities=16% Similarity=0.122 Sum_probs=55.6
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCC
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL 443 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
...|+|... ....|.++||+|....|..+...... ......|++... .|++..+ -
T Consensus 9 ~~~G~L~K~-------~~k~Wk~RwfvL~~~~L~yyk~~~~~---------------~~~~~~i~l~~~-~v~~~~~--~ 63 (107)
T 2cof_A 9 ETSSYLNVL-------VNSQWKSRWCSVRDNHLHFYQDRNRS---------------KVAQQPLSLVGC-EVVPDPS--P 63 (107)
T ss_dssp TTCCEEEEE-------ETTEEEEEEEEECSSCEEEECSSTTC---------------SEEEEEECTTTC-EEECCCB--T
T ss_pred cEeEEEEEe-------cCCCcceEEEEEECCEEEEEeCCccc---------------CCCeeEEeccce-EEEECCC--C
Confidence 456777654 34589999999987766554322110 012333444321 1333322 1
Q ss_pred CCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHH
Q 010976 444 PPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLV 478 (496)
Q Consensus 444 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~ 478 (496)
...++|.|.+..+. .||.|+|.++++.|++||+-+
T Consensus 64 ~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~ 99 (107)
T 2cof_A 64 DHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSE 99 (107)
T ss_dssp TBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHH
Confidence 25578888875344 499999999999999999854
No 261
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.05 E-value=0.0053 Score=51.22 Aligned_cols=95 Identities=24% Similarity=0.369 Sum_probs=58.4
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccch--hhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccC
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNH--EGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD 440 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
.+..|+|..... ....|.++||+|.. .-|..+...... ......|+|... .|..+.+
T Consensus 18 ~~~~G~L~K~g~-----~~~~Wk~R~fvL~~d~~~L~yy~~~~~~---------------~~~~g~i~L~~~-~v~~~~~ 76 (129)
T 1x1g_A 18 VVKQGYLAKQGH-----KRKNWKVRRFVLRKDPAFLHYYDPSKEE---------------NRPVGGFSLRGS-LVSALED 76 (129)
T ss_dssp EEEEEEEEEECS-----SSSSEEEEEEEEEESSCEEEEECSSSCC---------------SSCSCCEESTTC-CCEECCS
T ss_pred EEEEEEEEEECC-----CCCCeeeEEEEEeCCCCeEEEeCCCCcC---------------CccceEEECcCC-EEEEeCC
Confidence 355788776521 25589999999984 344443322110 112334555531 2222222
Q ss_pred CCCC-------CCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHH
Q 010976 441 LTLP-------PGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLV 478 (496)
Q Consensus 441 ~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~ 478 (496)
...| ..+.|.|.|..+. .||.|+|.++++.|++||+.+
T Consensus 77 ~~~p~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 122 (129)
T 1x1g_A 77 NGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKL 122 (129)
T ss_dssp SSSCSSCSSCCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHH
T ss_pred CCCcccccCCCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence 2222 4578999887765 589999999999999999876
No 262
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.94 E-value=0.011 Score=48.72 Aligned_cols=80 Identities=24% Similarity=0.319 Sum_probs=59.8
Q ss_pred hhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCC-CCC---CeeeEeecCCce
Q 010976 383 DWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL-PPG---AGLCIETIHGPV 458 (496)
Q Consensus 383 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~ 458 (496)
.|+|.++.||...+.-... |. .....-.|||.+|.+|+++.+.++ |+| +.|.+.| ...+
T Consensus 23 ~rKRHYWrLD~K~Itlf~~-e~---------------~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T-~~~~ 85 (129)
T 2d9z_A 23 LRKRHYWRLDSKCLTLFQN-ES---------------GSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIIT-DTMV 85 (129)
T ss_dssp CCEEEEEEEESSCEEEESC-SS---------------CCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEEC-SSCE
T ss_pred cccceeeEecCCeEEEEec-CC---------------CCceeceeeHHHhcccccccCccccCCCCCCceEEEEE-CCEE
Confidence 4777888888766554222 11 123466799999999999999886 555 8899986 6778
Q ss_pred eeeecC----------------hhhhhhHHHHHHHHH
Q 010976 459 FLVADS----------------WEALDGWLDAIRLVY 479 (496)
Q Consensus 459 ~~~~~~----------------~~~~~~~~~a~~~~~ 479 (496)
|+|.++ .+.+..|-.||+.+.
T Consensus 86 y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqAL 122 (129)
T 2d9z_A 86 YFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQAL 122 (129)
T ss_dssp EEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHH
T ss_pred EEEccCCCCCCCCccccccccchHHHHHHHHHHHHhc
Confidence 999873 478889999999865
No 263
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=95.92 E-value=0.011 Score=48.31 Aligned_cols=85 Identities=14% Similarity=0.133 Sum_probs=52.8
Q ss_pred ChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCCCCCeeeEeecCCce-
Q 010976 380 PHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPV- 458 (496)
Q Consensus 380 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 458 (496)
....|.++||+|....|..+...... .....|+|....+........-.+-++|.|.+.++.+
T Consensus 16 ~~k~Wk~rwfvL~~~~L~~yk~~~~~----------------~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~~y 79 (112)
T 3cxb_B 16 GKEHWKTCFVVLSNGILYQYPDRTDV----------------IPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCL 79 (112)
T ss_dssp SCCCCEEEEEEEETTEEEEESSSSCC----------------SCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCCE
T ss_pred CCCCceEEEEEEECCEEEEECCCCCC----------------CccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCCEE
Confidence 45689999999976666554332210 1123455553221100011223466889998777755
Q ss_pred eeeecChhhhhhHHHHHHHHHH
Q 010976 459 FLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 459 ~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
+|.|+|.++++.|+.||+.+..
T Consensus 80 ~f~A~s~ee~~~Wi~ai~~~~~ 101 (112)
T 3cxb_B 80 ELSAESEAEMAEWMQHLCQAVS 101 (112)
T ss_dssp EEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEcCCHHHHHHHHHHHHHHhh
Confidence 8889999999999999987643
No 264
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=95.88 E-value=0.0077 Score=55.99 Aligned_cols=97 Identities=22% Similarity=0.353 Sum_probs=64.1
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCC
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL 443 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
+..|+|..............|.++||+|....|..+..... ......|+|..+..+....
T Consensus 59 ~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~----------------~~~~g~I~L~~~~~v~~~~---- 118 (228)
T 3tfm_A 59 LKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSE----------------EKLKGTVEVRSAKEIIDNT---- 118 (228)
T ss_dssp SEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTC----------------CSEEEEEEGGGCSEEEEET----
T ss_pred ceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCC----------------cceeEEEEcCCCEEeccCC----
Confidence 34566655432211112368999999998766655432211 1235578888776655332
Q ss_pred CCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHH
Q 010976 444 PPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
...++|.|.|.....||.|+|.++++.|++||+-+..
T Consensus 119 ~k~~~F~I~t~~r~~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 119 NKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp TTTSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CCCcEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 3567899987555569999999999999999998764
No 265
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.85 E-value=0.087 Score=52.92 Aligned_cols=95 Identities=9% Similarity=-0.006 Sum_probs=78.5
Q ss_pred hccHHHHHHHHHHHHHhCCCC----------------------HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHH
Q 010976 135 QRILTFAAKRYANAIERNPED----------------------YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKK 192 (496)
Q Consensus 135 ~g~~~~Ai~~~~~al~~~P~~----------------------~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 192 (496)
.|+.+.|+..+.+|+.+.-.. ..+...++..+...|+ +.+++..
T Consensus 128 ~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~--------------~~~a~~~ 193 (388)
T 2ff4_A 128 AGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGR--------------ASAVIAE 193 (388)
T ss_dssp TTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------------HHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------------HHHHHHH
Confidence 356677777777777764211 1244456777788888 9999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 010976 193 YDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN 247 (496)
Q Consensus 193 ~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~ 247 (496)
+++++..+|-+-.+|..+-.+|.. .|+..+|++.|++....+..-+.++|.
T Consensus 194 l~~~~~~~P~~E~~~~~lm~al~~----~Gr~~~Al~~y~~~r~~L~~eLG~~P~ 244 (388)
T 2ff4_A 194 LEALTFEHPYREPLWTQLITAYYL----SDRQSDALGAYRRVKTTLADDLGIDPG 244 (388)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999 999999999999999999888888885
No 266
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=95.80 E-value=0.0084 Score=49.68 Aligned_cols=92 Identities=16% Similarity=0.191 Sum_probs=55.5
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCC
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL 443 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
...|+|..... ....|.++||+|....|..+..... ......|+|.++. |..+.+.
T Consensus 6 ~~~G~L~K~g~-----~~~~Wk~R~fvL~~~~L~yy~~~~~----------------~~~~g~i~L~~~~-v~~~~~~-- 61 (127)
T 1fgy_A 6 DREGWLLKLGG-----RVKTWKRRWFILTDNCLYYFEYTTD----------------KEPRGIIPLENLS-IREVLDP-- 61 (127)
T ss_dssp SEEEEEEEECS-----SSCCEEEEEEEEETTEEEEESSTTC----------------SSCSEEEECTTCE-EEEECCS--
T ss_pred ceEeEEEEECC-----CCCCeEEEEEEEECCEEEEeCCCCC----------------CCcceEEECCceE-EEEccCC--
Confidence 34677765421 2357999999998776666443221 1223456666543 3322221
Q ss_pred CCCCeeeEeecCC----------------------ceeeeecChhhhhhHHHHHHHHH
Q 010976 444 PPGAGLCIETIHG----------------------PVFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 444 ~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
...++|.|.+..+ ..||.|+|.++++.|++||+-+.
T Consensus 62 ~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i 119 (127)
T 1fgy_A 62 RKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASI 119 (127)
T ss_dssp SCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 2345555554332 24889999999999999998653
No 267
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.78 E-value=0.0095 Score=48.99 Aligned_cols=80 Identities=26% Similarity=0.424 Sum_probs=58.5
Q ss_pred hhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCC-CCC---CeeeEeecCCce
Q 010976 383 DWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL-PPG---AGLCIETIHGPV 458 (496)
Q Consensus 383 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~ 458 (496)
.|+|.+++||...+.-... +. .......|||.+|.+|++|.+.++ |++ +.|.+.| ...+
T Consensus 23 ~rKRHYWrLD~K~Itlf~~-e~---------------~~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T-~~~~ 85 (125)
T 2coa_A 23 LRKRHYWRLDCKCITLFQN-NT---------------TNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVT-ANAT 85 (125)
T ss_dssp CCEEEEEEECSSEEEEESS-SS---------------CSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEEC-SSCC
T ss_pred cccceeeEecCCeEEEEec-CC---------------CCceeeeeehhHeecccccccccccCCCCCCceEEEEe-CCeE
Confidence 5778888998776654322 11 123466899999999999999886 544 7788886 5678
Q ss_pred eeeecC------h------hhhhhHHHHHHHHH
Q 010976 459 FLVADS------W------EALDGWLDAIRLVY 479 (496)
Q Consensus 459 ~~~~~~------~------~~~~~~~~a~~~~~ 479 (496)
|+|..+ . +.+..|-.||+...
T Consensus 86 yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqAL 118 (125)
T 2coa_A 86 YFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL 118 (125)
T ss_dssp CCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred EEEccCCCCCCCCcCccccHHHHHHHHHHHhhc
Confidence 999874 2 44888999999763
No 268
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.76 E-value=0.012 Score=50.54 Aligned_cols=100 Identities=15% Similarity=0.167 Sum_probs=62.7
Q ss_pred hhhhccccCCCCCCCC-CChhhhhhhccccchh-----hhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecc
Q 010976 363 YLKAGYLTAPPAGIPV-APHSDWKRSQFVLNHE-----GLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVS 436 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~-~~~~~~~~~~~~l~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
....|||......... .....|.++||+|... .|..+...... ......|+|..+..+.
T Consensus 18 ~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~---------------~~~~g~I~L~~~~~~~ 82 (150)
T 1wg7_A 18 ITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKIS---------------KEPKGSIFLDSCMGVV 82 (150)
T ss_dssp CCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCS---------------SCCSEEECTTTCCEEC
T ss_pred eeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCC---------------CCcCcEEecccCEEEe
Confidence 4567888765321100 1345899999999864 44443222100 1234467776655443
Q ss_pred cccCCCCCCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHHHH
Q 010976 437 ACADLTLPPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
.. +-...++|.|.|..+. .||.|+|.++++.|+.||+-+..
T Consensus 83 ~~---~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~ 124 (150)
T 1wg7_A 83 QN---NKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQ 124 (150)
T ss_dssp CC---CSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cC---CCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 21 1246688999877654 58999999999999999998764
No 269
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=95.76 E-value=0.0086 Score=47.75 Aligned_cols=80 Identities=13% Similarity=0.165 Sum_probs=49.7
Q ss_pred hhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCCCCCeeeEeecCCce-e
Q 010976 381 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPV-F 459 (496)
Q Consensus 381 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 459 (496)
...|.++||+|....|..+....+.. ....-.|+|. ..+|.+..+ .+..|.|.+..+.+ +
T Consensus 12 ~k~Wk~R~fvL~~~~L~Yy~~~~~~~--------------~~~~g~i~L~-~~~v~~~~~----~~~~F~i~~~~~r~~~ 72 (103)
T 3rcp_A 12 LTGWQPRWFVLDNGILSYYDSQDDVC--------------KGSKGSIKMA-VCEIKVHSA----DNTRMELIIPGEQHFY 72 (103)
T ss_dssp TTCEEEEEEEEETTEEEEESSCC-----------------CCCSCEEEGG-GCEEECCTT----CSSEEEEEETTTEEEE
T ss_pred CCCeeceEEEEECCEEEEEecCCccc--------------CCcccEEEee-eeEEEEcCC----CCceEEEEeCCCCEEE
Confidence 34799999999876666544332210 0113345553 333332211 35678777644444 8
Q ss_pred eeecChhhhhhHHHHHHHHH
Q 010976 460 LVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 460 ~~~~~~~~~~~~~~a~~~~~ 479 (496)
|.|+|.++++.|+.||+.+.
T Consensus 73 l~a~s~~e~~~Wi~al~~a~ 92 (103)
T 3rcp_A 73 MKAVNAAERQRWLVALGSSK 92 (103)
T ss_dssp EECSSHHHHHHHHHHHHTTS
T ss_pred EECCCHHHHHHHHHHHHHHH
Confidence 89999999999999998653
No 270
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.60 E-value=0.012 Score=49.00 Aligned_cols=99 Identities=16% Similarity=0.132 Sum_probs=58.4
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccc---c
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSAC---A 439 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 439 (496)
-...|||..... .....|+++||+|....|....-..-+. ....+.-.|+|... .|+.| .
T Consensus 8 ~~~~G~L~KqG~----~~~K~WKrRwFVL~~~~LyYfk~~~~~~------------~~~~p~G~I~L~g~-tV~~~~~~~ 70 (126)
T 1wi1_A 8 MKHSGYLWAIGK----NVWKRWKKRFFVLVQVSQYTFAMCSYRE------------KKAEPQELLQLDGY-TVDYTDPQP 70 (126)
T ss_dssp EEEEEEEEEECS----SSCCSCEEEEEEEEEEETTEEEEEECCS------------SSSCCSEEEECSSC-EEEECCCCS
T ss_pred CceeEEEEEeCC----CcccccceEEEEEeCCEEEEEEcccccc------------cCCCCceEEECCCc-EEEEecCCc
Confidence 345788766521 1235899999999877777653000000 00122345666652 33332 2
Q ss_pred CCCCCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHH
Q 010976 440 DLTLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
+. ...-++|.+.+..-..||-|||.++++.|+.||.-+.
T Consensus 71 ~~-~~~k~~F~~v~~~~ty~~~Adseee~~~WikAi~~A~ 109 (126)
T 1wi1_A 71 GL-EGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRAT 109 (126)
T ss_dssp SC-CSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cc-ccCceEEEEecCCceEEEEcCCHHHHHHHHHHHHHHh
Confidence 21 2455777666433335888899999999999998653
No 271
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=95.42 E-value=0.016 Score=53.19 Aligned_cols=100 Identities=11% Similarity=0.149 Sum_probs=62.5
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeeccccc-CC
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACA-DL 441 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 441 (496)
-.+.|||........ .....|.++||+|....|..+..... ......|+|..+..+.... ..
T Consensus 106 v~k~G~L~Kkg~~~~-~~~k~WkkRwfVL~~~~L~Yyk~~~~----------------~~p~g~I~L~~~~~v~~~~~~~ 168 (211)
T 1u5e_A 106 VIKAGYLEKRRKDHS-FLGFEWQKRWCALSKTVFYYYGSDKD----------------KQQKGEFAIDGYDVRMNNTLRK 168 (211)
T ss_dssp EEEEEEEEEEEHHHH-TTTCCCEEEEEEEETTEEEEESSTTC----------------SSCSEEEECTTCEEEECGGGCS
T ss_pred ccEEEEEEEECCCCC-cCCCCcEeEEEEEECCEEEEEcCCCC----------------ccceEEEEeCCcEEEEcCCccc
Confidence 355788765421100 01247999999998766665432221 1234567777666654321 11
Q ss_pred CCCCCCeeeEeecCCce-eeeecChhhhhhHHHHHHHHH
Q 010976 442 TLPPGAGLCIETIHGPV-FLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 442 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~ 479 (496)
.-...++|.|.|..+.+ ||.|+|.++++.|++||+.+.
T Consensus 169 ~~~k~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL~~ai 207 (211)
T 1u5e_A 169 DGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFIL 207 (211)
T ss_dssp STTGGGEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 12235788888766555 789999999999999998764
No 272
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=95.40 E-value=0.022 Score=47.72 Aligned_cols=93 Identities=22% Similarity=0.272 Sum_probs=56.4
Q ss_pred hhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCCCCCeeeEeecCCce-ee
Q 010976 382 SDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPV-FL 460 (496)
Q Consensus 382 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 460 (496)
..|.++||+|....|..+-.......+ ...++ ....+...|+|.... +....|-+ ...++|.|.|.++.. +|
T Consensus 32 k~Wk~rwfvL~~~~L~yykd~~~~~~~----~~~~~-~~~~p~g~I~L~~~~-v~~~~~~~-kr~~~F~l~t~~~~~yl~ 104 (129)
T 2p0d_A 32 KNWGPSWVVLTGNSLVFYREPPPTAPS----SGWGP-AGSRPESSVDLRGAA-LAHGRHLS-SRRNVLHIRTIPGHEFLL 104 (129)
T ss_dssp CCCEEEEEEEESSEEEEESCC-------------------CCSEEEECTTCE-EEECTTSC-SSSSEEEEECTTSCEEEE
T ss_pred CCceEEEEEEeCCEEEEEcCccccccc----ccccc-cCCCCccEEEeCCcE-EEECCCCC-CCCcEEEEEcCCCCEEEE
Confidence 589999999987766654433211100 00000 111234567776443 33222222 356899999888865 67
Q ss_pred eecChhhhhhHHHHHHHHHHH
Q 010976 461 VADSWEALDGWLDAIRLVYTI 481 (496)
Q Consensus 461 ~~~~~~~~~~~~~a~~~~~~~ 481 (496)
.|+|.++++.|+.||.-+..-
T Consensus 105 qA~s~~e~~~Wi~aI~~~i~~ 125 (129)
T 2p0d_A 105 QSDHETELRAWHRALRTVIER 125 (129)
T ss_dssp ECSCHHHHHHHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHHHHHHh
Confidence 899999999999999977653
No 273
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=95.37 E-value=0.012 Score=51.77 Aligned_cols=86 Identities=10% Similarity=0.120 Sum_probs=48.8
Q ss_pred ChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCCCCCeeeEeecCCcee
Q 010976 380 PHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPVF 459 (496)
Q Consensus 380 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (496)
....|.++||+|....|..+....... ......|+|..+.++-..........++|.|.|.....|
T Consensus 25 ~~k~WkkRwfvL~~~~L~yyk~~~~~~--------------~~~~g~i~l~~~~~~~~~~~~~~~~~~~F~I~t~~r~~~ 90 (168)
T 2j59_M 25 SIRPWKQMYVVLRGHSLYLYKDKREQT--------------TPSEEEQPISVNACLIDISYSETKRKNVFRLTTSDCECL 90 (168)
T ss_dssp ---CCEEEEEEEETTEEEEESCTTCC----------------------CEECSSCEEEECSSSCSCSSEEEEECSSCEEE
T ss_pred CCCCceEEEEEEeCCEEEEEECCcccc--------------cccCCceEecccceEEEeccccCCCCCEEEEEeCCceEE
Confidence 345799999999877766654332210 001122333321111001111123567899987765568
Q ss_pred eeecChhhhhhHHHHHHHHH
Q 010976 460 LVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 460 ~~~~~~~~~~~~~~a~~~~~ 479 (496)
|.|+|.++++.|++||+-+.
T Consensus 91 l~A~s~~e~~~Wi~ai~~~~ 110 (168)
T 2j59_M 91 FQAEDRDDMLAWIKTIQESS 110 (168)
T ss_dssp EECSSHHHHHHHHHHHHHHC
T ss_pred EEcCCHHHHHHHHHHHHHHH
Confidence 99999999999999998764
No 274
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.32 E-value=0.078 Score=54.98 Aligned_cols=80 Identities=24% Similarity=0.219 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHH
Q 010976 206 AFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAA 285 (496)
Q Consensus 206 a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~A 285 (496)
.+..||.+... ...+..|. .+|.+|+.++|++...|+.||.+....|+. -+|+-+|-++
T Consensus 154 ~l~~LGDL~RY----~~~~~~A~-------~~Y~~A~~~~P~~G~~~nqLavla~~~~~~----------l~a~y~y~rs 212 (497)
T 1ya0_A 154 CLVHLGDIARY----RNQTSQAE-------SYYRHAAQLVPSNGQPYNQLAILASSKGDH----------LTTIFYYCRS 212 (497)
T ss_dssp HHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCTTBSHHHHHHHHHHHHTTCH----------HHHHHHHHHH
T ss_pred HHHHcccHHHH----HHHHHHHH-------HHHHHHHHhCCCCCchHHHHHHHHhccccc----------HHHHHHHHHH
Confidence 45667777666 77776666 999999999999999999999999999998 8999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHHc
Q 010976 286 IQLQFDFHRAIYNLGTVLYGL 306 (496)
Q Consensus 286 l~l~P~~~~a~~~lg~~~~~~ 306 (496)
+.....++.+..||..++...
T Consensus 213 l~~~~Pf~~a~~nL~~~f~~~ 233 (497)
T 1ya0_A 213 IAVKFPFPAASTNLQKALSKA 233 (497)
T ss_dssp HSSSBCCHHHHHHHHHHHHHH
T ss_pred HhcCCCChhHHHHHHHHHHHH
Confidence 999888999999999988754
No 275
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=95.30 E-value=0.016 Score=48.00 Aligned_cols=98 Identities=14% Similarity=0.305 Sum_probs=58.9
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCC-
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLT- 442 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 442 (496)
+..|+|.-.. .....|.++||+|...-|..+-..+... -..+...|+|.+-.-..++.+-+
T Consensus 7 ~k~G~L~Kk~-----~~~k~W~~rwfVL~~~~L~yyK~~~~~~-------------d~~P~gsI~L~~c~v~~~~~~~~~ 68 (120)
T 4a6h_A 7 IKSGFLERRS-----KFLKSYSKGYYVLTPNFLHEFKTADRKK-------------DLVPVMSLALSECTVTEHSRKNST 68 (120)
T ss_dssp SEEEEEEEEE-----TTTTEEEEEEEEECSSEEEEESSCCTTT-------------CCSCSEEEEGGGEEEEEECCCCC-
T ss_pred cEEEEEEEcC-----CCCCCCccEEEEEeCCEEEEEcCCCcCc-------------CCCceEEEECCCCEEEEccccccc
Confidence 4567776542 1345899999999877555443322110 01234567775433333222211
Q ss_pred -----CCCCCeeeEeecCC-------ceeeeecChhhhhhHHHHHHHHH
Q 010976 443 -----LPPGAGLCIETIHG-------PVFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 443 -----~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
.+.++.|.|.+.+. ..+|.|+|.++++.|++||+-+-
T Consensus 69 ~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 69 SSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp --------CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred ccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 24677888876552 34999999999999999999763
No 276
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=95.29 E-value=0.019 Score=48.11 Aligned_cols=101 Identities=19% Similarity=0.249 Sum_probs=62.3
Q ss_pred hhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceee--cccccCCC
Q 010976 365 KAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVS--VSACADLT 442 (496)
Q Consensus 365 ~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 442 (496)
..|+|..... ......|.++||+|....|..+..+++.. ...+...|+|..+.. |++..+-.
T Consensus 7 ~~G~L~K~~~---~~~~~~WkrRwfvL~~~~L~yyk~~~d~~-------------~~~p~g~I~L~~~~~~~v~~~~~~~ 70 (134)
T 2y7b_A 7 ERGFLTIFED---VSGFGAWHRRWCVLSGNCISYWTYPDDEK-------------RKNPIGRINLANCTSRQIEPANREF 70 (134)
T ss_dssp EEEEEEEEEE---ETTEEEEEEEEEEEETTEEEEESSHHHHT-------------TSCCSEEEEGGGBCSSSCEECCTTT
T ss_pred EEeeEEEEcC---CCCCCCcEEEEEEEECCEEEEECCCCccc-------------ccCceEEEEhhhCccccccccchhh
Confidence 4567664411 12345899999999877776655433211 012345677776543 44443322
Q ss_pred CCCCCeeeEeec-C---------------C----ceeeeecChhhhhhHHHHHHHHHHH
Q 010976 443 LPPGAGLCIETI-H---------------G----PVFLVADSWEALDGWLDAIRLVYTI 481 (496)
Q Consensus 443 ~~~~~~~~~~~~-~---------------~----~~~~~~~~~~~~~~~~~a~~~~~~~ 481 (496)
....++|.|.+. + | ..||.|+|.++++.|++||+-+..-
T Consensus 71 ~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 71 CARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp CCCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 335567777652 1 1 2599999999999999999987543
No 277
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=95.27 E-value=0.02 Score=49.07 Aligned_cols=99 Identities=13% Similarity=0.197 Sum_probs=61.5
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCC--
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL-- 441 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 441 (496)
+..|+|........ .....|.++||+|....|..+..... ......|+|..+. +..+.+.
T Consensus 18 ~~~G~L~K~g~~~~-~~~k~WkkR~fvL~~~~L~yyk~~~~----------------~~~~g~i~L~~~~-v~~~~~~~~ 79 (148)
T 1u5f_A 18 IKAGYLEKRRKDHS-FLGFEWQKRWCALSKTVFYYYGSDKD----------------KQQKGEFAIDGYD-VRMNNTLRK 79 (148)
T ss_dssp EEEEEEEEECCCSS-CSSCSEEEEEEEEETTEEEEESSTTC----------------SSCSEEEECTTCE-EEECTTSCS
T ss_pred cEEEEEEEeCCCCC-CcCCCceeEEEEEECCEEEEEcCCCC----------------cccceEEEcCCcE-EEECCCccc
Confidence 45788876532211 01258999999998666655432211 1234456776653 3322221
Q ss_pred CCCCCCeeeEeecCCce-eeeecChhhhhhHHHHHHHHHH
Q 010976 442 TLPPGAGLCIETIHGPV-FLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 442 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
.-...++|.|.|..+.+ ||.|+|.++++.|+.||+.+..
T Consensus 80 ~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 119 (148)
T 1u5f_A 80 DGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQ 119 (148)
T ss_dssp STTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred CCCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 11234788888766555 7899999999999999998754
No 278
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=95.18 E-value=0.016 Score=48.20 Aligned_cols=102 Identities=18% Similarity=0.155 Sum_probs=61.3
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCC-CceeeeecCceeecccccCCC
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPD-RRAIRIEVPDIVSVSACADLT 442 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.+.|+|.... .....|+++||+|....|............ ..+.+ ...-.|+|.... ++.+.+-.
T Consensus 13 ~k~G~L~K~g-----~~~k~Wk~RwfVL~~~~L~yyk~~~~~~~e--------~~plg~~~~G~I~L~~~~-v~~~~~~~ 78 (124)
T 2w2x_D 13 KQQGELYMWD-----SIDQKWTRHFCAIADAKLSFSDDIEQTMEE--------DNPLGSLCRGILDLNTYN-VVKAPQGK 78 (124)
T ss_dssp CCEEEEEEEE-----TTTTEEEEEEEEEETTEEEEEEEHHHHHHC--------SSCCCCSCSEEEEGGGEE-EEECTTCB
T ss_pred ceeEEEEEEC-----CCCCCceEeEEEEECCEEEEEccccccccc--------ccccCCccccEEECCCCE-EEEccCCc
Confidence 3467776542 224579999999987777665543221000 01111 234567777554 44333322
Q ss_pred CCCCCeeeEeecCC---ceeeeecChhhhhhHHHHHHHHH
Q 010976 443 LPPGAGLCIETIHG---PVFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 443 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
...-++|.|.+... ..||.|+|.++++.|+.||+-+.
T Consensus 79 ~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~ 118 (124)
T 2w2x_D 79 NQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREIT 118 (124)
T ss_dssp TTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHH
Confidence 33446788875443 34799999999999999999653
No 279
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.12 E-value=0.54 Score=44.17 Aligned_cols=119 Identities=12% Similarity=-0.015 Sum_probs=86.0
Q ss_pred hHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010976 132 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWA 211 (496)
Q Consensus 132 ~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg 211 (496)
..+.|.+++|+......++.+|.|++....+-.++.-.|+ ++.|.+-++.+.+++|+....-..+.
T Consensus 7 ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~--------------w~RA~~QL~~~a~l~p~~~~~a~~yr 72 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGD--------------FERADEQLMQSIKLFPEYLPGASQLR 72 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCC--------------HHHHHHHHHHHHHhCchhhHHHHHHH
Confidence 4567999999999999999999999999999999999999 99999999999999998755432222
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH---hcCC---CCHH---HHHHHHHHHHHccCcchHHHhhhhHHHHHHHH
Q 010976 212 IAISDRAKMRGRTKEAEELWKQATKNYEKAV---QLNW---NSPQ---ALNNWGLALQELSAIVPAREKQTIVRTAISKF 282 (496)
Q Consensus 212 ~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al---~l~P---~~~~---a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~ 282 (496)
.+... +.++..+ +..| ..+. ....-+......|+. ++|...-
T Consensus 73 ~lI~a-------------------E~~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~----------~~A~~lr 123 (273)
T 1zbp_A 73 HLVKA-------------------AQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDY----------EQVSELA 123 (273)
T ss_dssp HHHHH-------------------HHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCH----------HHHHHHH
T ss_pred HHHHH-------------------HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCH----------HHHHHHH
Confidence 22211 2333332 1112 1222 223334555566777 9999999
Q ss_pred HHHHHhcCCCH
Q 010976 283 RAAIQLQFDFH 293 (496)
Q Consensus 283 ~~Al~l~P~~~ 293 (496)
.+|++..|..+
T Consensus 124 ~~A~e~ap~~~ 134 (273)
T 1zbp_A 124 LQIEELRQEKG 134 (273)
T ss_dssp HHHHHHCCCCC
T ss_pred HHHHhcCcccC
Confidence 99999887653
No 280
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=95.05 E-value=0.026 Score=54.18 Aligned_cols=97 Identities=22% Similarity=0.334 Sum_probs=56.8
Q ss_pred hhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCc--eeecccc-cCC
Q 010976 365 KAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPD--IVSVSAC-ADL 441 (496)
Q Consensus 365 ~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~ 441 (496)
..|||..... ....|.++||+|....|..+....... +...-..+.+.+ |..+..+ ...
T Consensus 170 ~~G~L~k~~~-----~~k~WkkR~fvL~~~~L~yyk~~~~~~-------------~~~~i~l~~l~~~~v~~~~~~~~~~ 231 (291)
T 3tca_A 170 LEGALYLKED-----GKKSWKRRYFLLRASGIYYVPKGKTKT-------------SRDLACFIQFENVNIYYGIQCKMKY 231 (291)
T ss_dssp CEEEEEEECT-----TSSCEEEEEEEECSSEEEECCTTCCSS-------------TTTCEEEEEGGGCEEEEECSHHHHH
T ss_pred eEEEEEEeCC-----CCCCceEEEEEEeCCEEEEEecCcccc-------------ccCceeeccceeEEEEecCcccccc
Confidence 4677765522 234799999999887776643322210 011111112221 1111111 113
Q ss_pred CCCCCCeeeEeecCC------ceeeeecChhhhhhHHHHHHHHH
Q 010976 442 TLPPGAGLCIETIHG------PVFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 442 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
..|..++|+|-+... ..||.|+|.++++.|+.||+++-
T Consensus 232 ~~~~~~~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 232 KAPTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp CCSSSCEEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 556778999875432 14899999999999999999874
No 281
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.95 E-value=0.033 Score=45.33 Aligned_cols=93 Identities=13% Similarity=0.224 Sum_probs=55.6
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCC
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLT 442 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
-...|+|...... ....|.++||+|....|..+...... ....|.+... .|.+..+
T Consensus 10 ~~~~G~L~K~~~~----~~k~WkkR~fvL~~~~L~yyk~~~~~-----------------~~~~i~l~~~-~v~~~~~-- 65 (114)
T 2da0_A 10 SEKKGYLLKKSDG----IRKVWQRRKCSVKNGILTISHATSNR-----------------QPAKLNLLTC-QVKPNAE-- 65 (114)
T ss_dssp SCEEEEEEEECSS----SCCCEEEEEEEEETTEEEECCSSCCS-----------------CCEEEETTTS-EEEECSS--
T ss_pred ccEEEEEEEeCCC----CCCCceeEEEEEeCCEEEEEcCCCCC-----------------CCCEEEeeee-EEEECCC--
Confidence 3457777765321 22589999999976666654331110 1112222111 1221111
Q ss_pred CCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHHHH
Q 010976 443 LPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVYTI 481 (496)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 481 (496)
..++|.|.|.....||.|+|.++++.|++||+-+..-
T Consensus 66 --~~~~F~I~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 102 (114)
T 2da0_A 66 --DKKSFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEE 102 (114)
T ss_dssp --SSSCEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred --CCCEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 3467888765444599999999999999999976543
No 282
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.90 E-value=0.23 Score=54.13 Aligned_cols=88 Identities=15% Similarity=-0.013 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHcc
Q 010976 186 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQ--LNWNSPQALNNWGLALQELS 263 (496)
Q Consensus 186 ~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~--l~P~~~~a~~~lg~~l~~~g 263 (496)
+++|.+..+ .-++...|.++|..+.. .|+++.|+.+|.++ ..|..+.. ....+...+..++......|
T Consensus 668 ~~~A~~~~~-----~~~~~~~W~~la~~al~----~~~~~~A~~~y~~~-~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~ 737 (814)
T 3mkq_A 668 LTLARDLLT-----DESAEMKWRALGDASLQ----RFNFKLAIEAFTNA-HDLESLFLLHSSFNNKEGLVTLAKDAETTG 737 (814)
T ss_dssp HHHHHHHHT-----TCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHH-TCHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHH-----hhCcHhHHHHHHHHHHH----cCCHHHHHHHHHHc-cChhhhHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 888877653 33678899999999999 99999999877764 22332221 12556777778888888888
Q ss_pred CcchH---HHhhhhHHHHHHHHH
Q 010976 264 AIVPA---REKQTIVRTAISKFR 283 (496)
Q Consensus 264 ~~~~A---~~~~~~~~~Ai~~~~ 283 (496)
++..| +...|++++|++.|.
T Consensus 738 ~~~~A~~~~~~~g~~~~a~~~~~ 760 (814)
T 3mkq_A 738 KFNLAFNAYWIAGDIQGAKDLLI 760 (814)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHH
T ss_pred chHHHHHHHHHcCCHHHHHHHHH
Confidence 88433 223444455554443
No 283
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=94.87 E-value=0.0072 Score=50.17 Aligned_cols=96 Identities=15% Similarity=0.207 Sum_probs=55.2
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccchh-hhhhhccccccccccccCCCCCCCCCCCceeeeecCceeeccc-ccCC
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHE-GLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSA-CADL 441 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 441 (496)
...|+|..... ....|.++||+|... .|..+...... .....|||..+.-+.. +...
T Consensus 9 ~~~G~L~K~g~-----~~k~WkkRwfvL~~~~~L~yy~~~~~~----------------~~~g~i~L~~~~~~~~~~~~~ 67 (125)
T 1unq_A 9 VKEGWLHKRGE-----YIKTWRPRYFLLKNDGTFIGYKERPQD----------------VDQREAPLNNFSVAQCQLMKT 67 (125)
T ss_dssp EEEEEEEEECS-----SSCCEEEEEEEEETTSEEEEESSCCCS----------------HHHHTSCSEEEECTTCEEEEE
T ss_pred eEEeeEEeccC-----CccCccCcEEEEecCCEEEEEeCCCCC----------------CCCceeEccceeEEeeeeccc
Confidence 45788765421 245799999999843 44433221110 0122345544332211 0001
Q ss_pred CCCCCCeeeEeec---CCc-eeeeecChhhhhhHHHHHHHHHH
Q 010976 442 TLPPGAGLCIETI---HGP-VFLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 442 ~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
.-+..++|.|.+. .+. .||.|+|.++++.|++||+-+..
T Consensus 68 ~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~ 110 (125)
T 1unq_A 68 ERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVAD 110 (125)
T ss_dssp CSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHh
Confidence 1235577887753 222 48999999999999999997754
No 284
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.87 E-value=0.15 Score=52.83 Aligned_cols=80 Identities=20% Similarity=0.256 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 010976 158 ALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKN 237 (496)
Q Consensus 158 a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~ 237 (496)
.+..+|.+...... +..|..+|.+|+.++|++...|+.||.+... .|+.-+|+ -+
T Consensus 154 ~l~~LGDL~RY~~~--------------~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~----~~~~l~a~-------y~ 208 (497)
T 1ya0_A 154 CLVHLGDIARYRNQ--------------TSQAESYYRHAAQLVPSNGQPYNQLAILASS----KGDHLTTI-------FY 208 (497)
T ss_dssp HHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHCTTBSHHHHHHHHHHHH----TTCHHHHH-------HH
T ss_pred HHHHcccHHHHHHH--------------HHHHHHHHHHHHHhCCCCCchHHHHHHHHhc----ccccHHHH-------HH
Confidence 45567777777777 8999999999999999999999999999999 99999998 78
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHc
Q 010976 238 YEKAVQLNWNSPQALNNWGLALQEL 262 (496)
Q Consensus 238 ~~~Al~l~P~~~~a~~~lg~~l~~~ 262 (496)
|-+++....-++.+..|+..++...
T Consensus 209 y~rsl~~~~Pf~~a~~nL~~~f~~~ 233 (497)
T 1ya0_A 209 YCRSIAVKFPFPAASTNLQKALSKA 233 (497)
T ss_dssp HHHHHSSSBCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCChhHHHHHHHHHHHH
Confidence 8888877766888888888887653
No 285
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=94.81 E-value=0.023 Score=46.95 Aligned_cols=91 Identities=9% Similarity=0.175 Sum_probs=55.9
Q ss_pred ChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCCCCCeeeEeecCCce-
Q 010976 380 PHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPV- 458 (496)
Q Consensus 380 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 458 (496)
....|.++||+|....|..+......... + +... .....|+|... .++.+.|. -...++|+|.|.++.+
T Consensus 28 ~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~----~--~~~~--~~~~~i~L~~~-~v~~~~d~-~kr~~~F~l~t~~~~~~ 97 (122)
T 1dro_A 28 SNRSWDKVYMAAKAGRISFYKDQKGYKSN----P--ELTF--RGEPSYDLQNA-AIEIASDY-TKKKHVLRVKLANGALF 97 (122)
T ss_dssp CCCCCEEEEEEESSSCCBEESSSSHHHHC----T--TCCS--SCCCBCCCSSC-CCEECCSS-SSSTTEEEEECSSSCEE
T ss_pred CCCCccEEEEEEECCEEEEEeCCcccccC----C--Cccc--CCCceEECCCC-EEEeCCCC-CCCCeEEEEEEcCCCEE
Confidence 45689999999987766655443332100 0 0000 00123444322 23333333 2467899999878776
Q ss_pred eeeecChhhhhhHHHHHHHHHH
Q 010976 459 FLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 459 ~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
+|-|+|.+++..|+.||.-+..
T Consensus 98 lfqA~s~~e~~~Wi~ai~~~i~ 119 (122)
T 1dro_A 98 LLQAHDDTEMSQWVTSLKAQSD 119 (122)
T ss_dssp EEECSSSHHHHHHHHHHHHHHT
T ss_pred EEECCCHHHHHHHHHHHHHHHH
Confidence 6789999999999999997643
No 286
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=94.79 E-value=0.037 Score=45.66 Aligned_cols=88 Identities=13% Similarity=0.172 Sum_probs=53.9
Q ss_pred hhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCCCCCeeeEeecCCce-e
Q 010976 381 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPV-F 459 (496)
Q Consensus 381 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 459 (496)
...|.++||+|....|..+........ |.... ....|++... .++.+.+. -...++|.|.|.++.+ +
T Consensus 29 ~~~Wk~rwfvL~~~~L~yyk~~~~~~~--------~~~~~--~~~~i~l~~~-~~~~~~~~-~~r~~~F~i~~~~~~~~~ 96 (123)
T 1wjm_A 29 NRSWQNVYCVLRRGSLGFYKDAKAASA--------GVPYH--GEVPVSLARA-QGSVAFDY-RKRKHVFKLGLQDGKEYL 96 (123)
T ss_dssp CCCCEEEEEEEETTEEEEESSHHHHTT--------TCBSS--SCCCEECTTC-EEEECTTC-SSCSSEEEEECSSSCEEE
T ss_pred CCCccEEEEEEECCEEEEEEccccccc--------CcccC--CCceEEccCc-EEeecccc-cCCCCEEEEEEcCCcEEE
Confidence 458999999998777665543322110 00000 1123344321 12222221 2367899999888765 7
Q ss_pred eeecChhhhhhHHHHHHHHHH
Q 010976 460 LVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 460 ~~~~~~~~~~~~~~a~~~~~~ 480 (496)
|.|+|.+++..|++||..+..
T Consensus 97 f~A~s~~e~~~Wi~ai~~~~~ 117 (123)
T 1wjm_A 97 FQAKDEAEMSSWLRVVNAAIA 117 (123)
T ss_dssp EECSSHHHHHHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHHHHHh
Confidence 899999999999999997654
No 287
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=94.61 E-value=0.029 Score=46.74 Aligned_cols=37 Identities=24% Similarity=0.314 Sum_probs=30.3
Q ss_pred CCCCeeeEeecCCc-eeeeecChhhhhhHHHHHHHHHH
Q 010976 444 PPGAGLCIETIHGP-VFLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 444 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
...+.|.|-|..+. .||.|+|.++++.|++||+-+..
T Consensus 87 ~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~ 124 (128)
T 2rlo_A 87 EENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQIL 124 (128)
T ss_dssp CCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 45678888877754 49999999999999999987654
No 288
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.52 E-value=0.43 Score=51.92 Aligned_cols=121 Identities=12% Similarity=-0.038 Sum_probs=72.5
Q ss_pred hhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh--------CCCCHH
Q 010976 134 RQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL--------CPTLHD 205 (496)
Q Consensus 134 ~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l--------~P~~~~ 205 (496)
..|++++|.+..+ ..++...|..+|..+.+.++ ++.|+++|.++=.. ..++.+
T Consensus 664 ~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~--------------~~~A~~~y~~~~d~~~l~~l~~~~~~~~ 724 (814)
T 3mkq_A 664 KVGQLTLARDLLT-----DESAEMKWRALGDASLQRFN--------------FKLAIEAFTNAHDLESLFLLHSSFNNKE 724 (814)
T ss_dssp HHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHTCHHHHHHHHHHTTCHH
T ss_pred hcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCC--------------HHHHHHHHHHccChhhhHHHHHHcCCHH
Confidence 3577777776643 34688999999999999999 99999999987221 122333
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchH---HHhhhhHHHHHHHH
Q 010976 206 AFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPA---REKQTIVRTAISKF 282 (496)
Q Consensus 206 a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A---~~~~~~~~~Ai~~~ 282 (496)
.+..++..... .|++..|. .++.+.|++++| +.+.+++++|+..-
T Consensus 725 ~~~~~~~~a~~----~~~~~~A~----------------------------~~~~~~g~~~~a~~~~~~~~~~~~A~~lA 772 (814)
T 3mkq_A 725 GLVTLAKDAET----TGKFNLAF----------------------------NAYWIAGDIQGAKDLLIKSQRFSEAAFLG 772 (814)
T ss_dssp HHHHHHHHHHH----TTCHHHHH----------------------------HHHHHHTCHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHH----cCchHHHH----------------------------HHHHHcCCHHHHHHHHHHcCChHHHHHHH
Confidence 33333333333 44444444 223344555444 23445558887765
Q ss_pred HHHHHhcCCC---HHHHHHHHHHHHHcch
Q 010976 283 RAAIQLQFDF---HRAIYNLGTVLYGLAE 308 (496)
Q Consensus 283 ~~Al~l~P~~---~~a~~~lg~~~~~~g~ 308 (496)
++ ..|.. ..+....+.-+...|+
T Consensus 773 ~~---~~~~~~~i~~~~~~~~~~L~~~~~ 798 (814)
T 3mkq_A 773 ST---YGLGDNEVNDIVTKWKENLILNGK 798 (814)
T ss_dssp HH---TTCCHHHHHHHHHHHHHHHHTTTC
T ss_pred HH---hCCChHHHHHHHHHHHHHHHhccc
Confidence 53 55544 2455555666666665
No 289
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=94.51 E-value=0.036 Score=55.69 Aligned_cols=98 Identities=13% Similarity=0.155 Sum_probs=62.8
Q ss_pred hhhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeec---ccc
Q 010976 362 PYLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSV---SAC 438 (496)
Q Consensus 362 ~~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 438 (496)
..++.|+|...... ....|.++||+|....|..+...... .....|+|..+..+ ..+
T Consensus 268 ~~~k~G~L~K~g~~----~~k~WKkRwFVL~~~~L~YYk~~~d~----------------~~~G~I~L~~~~~~~~v~~~ 327 (386)
T 3lju_X 268 NYLKEGYMEKTGPK----QTEGFRKRWFTMDDRRLMYFKDPLDA----------------FARGEVFIGSKESGYTVLHG 327 (386)
T ss_dssp CCSEEEEEEECCTT----SCSCCEEEEEEEETTEEEEESSTTCS----------------BCSEEEECCCGGGTCEEEES
T ss_pred ccceeeeEEEECCC----CCCCCcccEEEEECCEEEEEecCCCc----------------ccceEEEeecceeeeeeccc
Confidence 34668888765322 12579999999997777765432221 12345666554443 222
Q ss_pred cCCCCCC---CCeeeEeecCCceeeeecChhhhhhHHHHHHHHH
Q 010976 439 ADLTLPP---GAGLCIETIHGPVFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 439 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
...+... .++|.|.|..-..||.|+|.++++.|++||+-|.
T Consensus 328 ~~~~~~~~~~~~~F~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i 371 (386)
T 3lju_X 328 FPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAV 371 (386)
T ss_dssp CCTTCCSCCSCEEEEEECSSCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCccccccCCCcEEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 2222211 4778888665445999999999999999999764
No 290
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=94.49 E-value=0.032 Score=44.46 Aligned_cols=86 Identities=13% Similarity=0.224 Sum_probs=50.4
Q ss_pred ChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCCCCCeeeEeecCCce-
Q 010976 380 PHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPV- 458 (496)
Q Consensus 380 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 458 (496)
....|.++||+|....|..+........ +.. ......|++.... ++...+ .-...++|.|.|.++.+
T Consensus 19 ~~~~Wk~rwfvL~~~~L~yyk~~~~~~~--------~~~--~~~~~~i~l~~~~-~~~~~~-~~~~~~~F~i~~~~~~~~ 86 (106)
T 1btn_A 19 SSRSWHNVYCVINNQEMGFYKDAKSAAS--------GIP--YHSEVPVSLKEAI-CEVALD-YKKKKHVFKLRLSDGNEY 86 (106)
T ss_dssp SCCCCEEEEEEEETTEEEEESSHHHHHH--------TCC--SSSCCCEECTTCE-EEECSS-CCSSSSEEEEECTTSCEE
T ss_pred CCCChhEEEEEEECCEEEEEeCCccccc--------CCC--CCCcceEECCCCE-EEEccc-ccCCccEEEEEecCCCEE
Confidence 3457999999998776665543322110 000 0112233433211 111111 12356789998777655
Q ss_pred eeeecChhhhhhHHHHHHH
Q 010976 459 FLVADSWEALDGWLDAIRL 477 (496)
Q Consensus 459 ~~~~~~~~~~~~~~~a~~~ 477 (496)
||.|+|.+++..|++||+-
T Consensus 87 ~~~A~s~~e~~~Wi~ai~~ 105 (106)
T 1btn_A 87 LFQAKDDEEMNTWIQAISS 105 (106)
T ss_dssp EEECSSHHHHHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHhc
Confidence 8899999999999999973
No 291
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=94.12 E-value=0.068 Score=43.55 Aligned_cols=92 Identities=17% Similarity=0.207 Sum_probs=54.5
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccchhh---hhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccC
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEG---LQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD 440 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
+..|||.... . ...|.++||+|-... |..+....+ ..+...|||... .|..+..
T Consensus 9 ~~~G~L~k~~--~----~~~WkkrWfVL~~~~~~~Ly~Yk~~~d----------------~~p~g~I~L~g~-~V~~~~~ 65 (112)
T 2coc_A 9 LLCGPLRLSE--S----GETWSEVWAAIPMSDPQVLHLQGGSQD----------------GRLPRTIPLPSC-KLSVPDP 65 (112)
T ss_dssp SSEEEEEEES--S----SSCEEEEEEECCTTCTTCEEEECCTTC----------------SSSCSEECGGGC-EEECCCS
T ss_pred eEEEEEEecC--C----CCCceEEEEEEECCCccEEEEECCCCc----------------cCcceEEEcCCC-EEEecCc
Confidence 3457776531 1 457999999997532 333222211 123446666544 3332222
Q ss_pred CCCC-CCCeeeEeecCCce-eeeecChhhhhhHHHHHHHHH
Q 010976 441 LTLP-PGAGLCIETIHGPV-FLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 441 ~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~ 479 (496)
..-+ ..++|.|- ..+-+ ||.|+|.++++.|+.+|..+.
T Consensus 66 ~~~~~~~~~Fki~-~~~~~y~f~A~s~e~~~~Wl~al~~A~ 105 (112)
T 2coc_A 66 EERLDSGHVWKLQ-WAKQSWYLSASSAELQQQWLETLSTAA 105 (112)
T ss_dssp SSCCSSSEEEEEE-ETTEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred ccccCCCCEEEEe-cCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 2222 56778777 33434 999999999999999998753
No 292
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.98 E-value=0.4 Score=52.13 Aligned_cols=113 Identities=13% Similarity=0.071 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH--hcCCCCCCCCCcchhhhHHHHHHHHHHHHH--------hCCCCHH--
Q 010976 138 LTFAAKRYANAIERNPEDYDALYNWALVLQE--SADNVSLDSTSPSKDALLEEACKKYDEATR--------LCPTLHD-- 205 (496)
Q Consensus 138 ~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~--------l~P~~~~-- 205 (496)
++.|+..+++....+|.... ++..+.+... .++ .--+|+....++++ +.+.+..
T Consensus 265 ~~~a~~~le~L~~~~p~~~~-~~~~~~i~~~~~~~~-------------~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~ 330 (754)
T 4gns_B 265 VDFTIDYLKGLTKKDPIHDI-YYKTAMITILDHIET-------------KELDMITILNETLDPLLSLLNDLPPRDADSA 330 (754)
T ss_dssp HHHHHHHHHHHHHHCGGGHH-HHHHHHHHHHTTCGG-------------GHHHHHHHHHHHHHHHHHHHHTCSSCCHHHH
T ss_pred HHHHHHHHHHHHhhCCchhH-HHHHHHHHHHHHhhh-------------hhHHHHHHHHHHHHHhhhhhhhhcccccccc
Confidence 68899999999999997643 3333333221 111 13457777777664 2333332
Q ss_pred --------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHH
Q 010976 206 --------AFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRT 277 (496)
Q Consensus 206 --------a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~ 277 (496)
.+..-+..+.. .|+++-|+ .+.++|+.+-|.....|+.|+.+|..+|++ +.
T Consensus 331 ~~~~~~~~LL~~Qa~FLl~----K~~~elAL-------~~Ak~AV~~aPseF~tW~~La~vYi~l~d~----------e~ 389 (754)
T 4gns_B 331 RLMNCMSDLLNIQTNFLLN----RGDYELAL-------GVSNTSTELALDSFESWYNLARCHIKKEEY----------EK 389 (754)
T ss_dssp HHHHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHHHCSSCHHHHHHHHHHHHHTTCH----------HH
T ss_pred cccCcchHHHHHHHHHHhc----cCcHHHHH-------HHHHHHHhcCchhhHHHHHHHHHHHHhccH----------HH
Confidence 22223344445 78888888 899999999999999999999999999999 88
Q ss_pred HHHHHHHH
Q 010976 278 AISKFRAA 285 (496)
Q Consensus 278 Ai~~~~~A 285 (496)
|+-.+..+
T Consensus 390 ALLtLNSc 397 (754)
T 4gns_B 390 ALFAINSM 397 (754)
T ss_dssp HHHHHHHS
T ss_pred HHHHHhcC
Confidence 87665543
No 293
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=93.97 E-value=0.074 Score=50.38 Aligned_cols=90 Identities=17% Similarity=0.216 Sum_probs=55.9
Q ss_pred hhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCCCCCeeeEeecCCce-e
Q 010976 381 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPV-F 459 (496)
Q Consensus 381 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 459 (496)
...|.++||+|....|..+-...... ..........|+|... .+..+.+-+ -..++|.|.|..+.+ +
T Consensus 36 ~K~WkrRWfVL~~~~L~yyK~~~~~~----------~~~~~~p~g~I~L~~~-~v~~~~~~~-kk~~~F~I~t~~~r~y~ 103 (263)
T 3a8p_A 36 RRKWKQYWVTLKGCTLLFYETYGKNS----------TEQNSAPRCALFAEDS-IVQSVPEHP-KKEHVFCLSNSCGDVYL 103 (263)
T ss_dssp TCCCEEEEEEEETTEEEEESSCCC----------------CCCSEEEECTTC-EEEECTTCS-SCSSEEEEECTTSCEEE
T ss_pred CCCceEEEEEEcCCEEEEEecCcccc----------cccccCccceEEcCCc-EEEECCcCC-CCCCEEEEEcCCCcEEE
Confidence 45899999999877666544321100 0000122345676532 222222221 256889998766665 7
Q ss_pred eeecChhhhhhHHHHHHHHHHHH
Q 010976 460 LVADSWEALDGWLDAIRLVYTIY 482 (496)
Q Consensus 460 ~~~~~~~~~~~~~~a~~~~~~~~ 482 (496)
|.|+|.++++.|++||.-+....
T Consensus 104 f~A~s~ee~~~Wi~aI~~a~~~~ 126 (263)
T 3a8p_A 104 FQATSQTDLENWVTAIHSACASL 126 (263)
T ss_dssp EECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999876544
No 294
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=93.82 E-value=0.077 Score=43.70 Aligned_cols=92 Identities=16% Similarity=0.254 Sum_probs=59.3
Q ss_pred hhhccccCCCCCCCCCChh-hhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCC
Q 010976 364 LKAGYLTAPPAGIPVAPHS-DWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLT 442 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.+.|+|.... .+-.. .|+++||+|....|..+-..+. ......|||..+. |..+.+-.
T Consensus 13 irkGWL~k~~----~g~~k~~wk~rWFVLt~~~L~yyKd~~e----------------ke~~G~IpL~~~~-vr~v~~~~ 71 (125)
T 1dyn_A 13 IRKGWLTINN----IGIMKGGSKEYWFVLTAENLSWYKDDEE----------------KEKKYMLSVDNLK-LRDVEKGF 71 (125)
T ss_dssp EEEEEEEESC----CCGGGTSSEEEEEEEESSEEEEESSTTC----------------SCEEEEEECTTEE-EEECCSCS
T ss_pred EEEEEEEEec----CccccCCceeeEEEEeccceeeecCCcc----------------cccceEEECCCce-EeccCCCC
Confidence 5678887532 22233 5999999999888877654443 2345567775433 33333323
Q ss_pred CCCCCeeeEeecCC--------ceeeeecChhhhhhHHHHHH
Q 010976 443 LPPGAGLCIETIHG--------PVFLVADSWEALDGWLDAIR 476 (496)
Q Consensus 443 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~a~~ 476 (496)
...-+.|.+-..+| ...|-|+|.+++++|..||+
T Consensus 72 ~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ 113 (125)
T 1dyn_A 72 MSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFL 113 (125)
T ss_dssp SSSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHH
T ss_pred CCCceEEEEECCCCccccccceEEEEeCCCHHHHHHHHHHHH
Confidence 34556666653333 24889999999999999994
No 295
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=93.80 E-value=2.2 Score=42.74 Aligned_cols=92 Identities=23% Similarity=0.292 Sum_probs=54.9
Q ss_pred hhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCC
Q 010976 365 KAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLP 444 (496)
Q Consensus 365 ~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (496)
+.|||..... .+.....|.++||+|....|..+...... ....++|.. .+|.++.+ ..
T Consensus 303 k~G~L~k~~~--~g~~~~~W~rrwfvl~~~~l~y~~~~~~~-----------------~~~~~~l~~-~~v~~~~~--~~ 360 (407)
T 4h8s_A 303 KAGYLNLRNK--TGLVTTTWERLYFFTQGGNLMCQPRGAVA-----------------GGLIQDLDN-CSVMAVDC--ED 360 (407)
T ss_dssp CEEEEEEEEE--CSSSCEEEEEEEEEECSSCEECCCTTCSS-----------------CCCCBCSSC-CEEEEECC--TT
T ss_pred eeceeeeecc--CCCCCCCceEEEEEEECCEEEEEeCCCCC-----------------CCeEEECCc-eEEEECCC--CC
Confidence 4677754311 11234579999999987766654321111 111223321 12333221 23
Q ss_pred CCCeeeEeecCCc--eeeeecChhhhhhHHHHHHHH
Q 010976 445 PGAGLCIETIHGP--VFLVADSWEALDGWLDAIRLV 478 (496)
Q Consensus 445 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~ 478 (496)
+.++|.|-|..+. .+|-|+|.++++.|+.||.-+
T Consensus 361 r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a 396 (407)
T 4h8s_A 361 RRYCFQITTPNGKSGIILQAESRKENEEWICAINNI 396 (407)
T ss_dssp CSSEEEEECTTSSCCEEEECSSSHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCceEEEEcCCHHHHHHHHHHHHHH
Confidence 5678888876653 488999999999999999865
No 296
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=93.45 E-value=0.12 Score=42.82 Aligned_cols=89 Identities=19% Similarity=0.223 Sum_probs=53.3
Q ss_pred hhhhhhhccccchhhhhhhccccccccccccCCCCCCCCC---CCceeeeecCceeeccccc-CCCCCCCCeeeEeecCC
Q 010976 381 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSP---DRRAIRIEVPDIVSVSACA-DLTLPPGAGLCIETIHG 456 (496)
Q Consensus 381 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 456 (496)
...|.++||+|....|.-+....... ..|.-.+ ......|+|.. ..++... |.+ ..-++|.|.|.+|
T Consensus 28 ~r~W~~~w~VL~~~~L~~yKd~~~~~-------~~~~~~~~~~~~~~~~i~L~~-a~v~~~~~d~~-krk~vF~l~t~~~ 98 (124)
T 3pp2_A 28 KKHWSASWTVLEGGVLTFFKDSKTSA-------AGGLRQPSKFSTPEYTVELRG-ATLSWAPKDKS-SRKNVLELRSRDG 98 (124)
T ss_dssp SCCCEEEEEEEETTEEEEESCSBCC----------CBCCGGGGCSEEEEEECTT-CEEEECCGGGC-SSSSEEEEECTTS
T ss_pred CCCceEEEEEEECCEEEEEecCcccc-------ccCccCcccccCCcceEEcCC-CEEEecccccC-CCceEEEEECCCC
Confidence 34899999999876665543222110 0000000 12344566654 2233332 322 3568999998888
Q ss_pred ce-eeeecChhhhhhHHHHHHHH
Q 010976 457 PV-FLVADSWEALDGWLDAIRLV 478 (496)
Q Consensus 457 ~~-~~~~~~~~~~~~~~~a~~~~ 478 (496)
.. +|-|+|.+++..|+.+|.-+
T Consensus 99 ~~ylfqA~s~~e~~~Wi~aI~~a 121 (124)
T 3pp2_A 99 SEYLIQHDSEAIISTWHKAIAQG 121 (124)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHH
Confidence 77 45589999999999999864
No 297
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.09 E-value=1.2 Score=48.32 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHh-cCCCCH----------HHHHH
Q 010976 186 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQ-LNWNSP----------QALNN 254 (496)
Q Consensus 186 ~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~-l~P~~~----------~a~~~ 254 (496)
++.|+..+++..+.+|.....+....+.... ....+--+|+....++++.+...+. +.+.+. ..+..
T Consensus 265 ~~~a~~~le~L~~~~p~~~~~~~~~~i~~~~--~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~ 342 (754)
T 4gns_B 265 VDFTIDYLKGLTKKDPIHDIYYKTAMITILD--HIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNI 342 (754)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHT--TCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHH
Confidence 6889999999999999765433322222111 0022345677666666665544443 233332 23334
Q ss_pred HHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010976 255 WGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 255 lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~ 308 (496)
-+..+...|++ +-|+.+-++|+.+.|.....|+.|+.+|..+|+
T Consensus 343 Qa~FLl~K~~~----------elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d 386 (754)
T 4gns_B 343 QTNFLLNRGDY----------ELALGVSNTSTELALDSFESWYNLARCHIKKEE 386 (754)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHhccCcH----------HHHHHHHHHHHhcCchhhHHHHHHHHHHHHhcc
Confidence 45555566666 999999999999999999999999999999999
No 298
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.02 E-value=2.8 Score=39.32 Aligned_cols=61 Identities=11% Similarity=0.046 Sum_probs=55.5
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHH
Q 010976 221 RGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYN 298 (496)
Q Consensus 221 ~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~ 298 (496)
.|..++|+ +.....++.+|.|......|-.+|+-.|++ +.|...++.+.+++|+.......
T Consensus 10 ~g~L~~al-------~~~~~~VR~~P~da~~R~~LfqLLcv~G~w----------~RA~~QL~~~a~l~p~~~~~a~~ 70 (273)
T 1zbp_A 10 EGQLQQAL-------ELLIEAIKASPKDASLRSSFIELLCIDGDF----------ERADEQLMQSIKLFPEYLPGASQ 70 (273)
T ss_dssp TTCHHHHH-------HHHHHHHHTCTTCHHHHHHHHHHHHHHTCH----------HHHHHHHHHHHHHCGGGHHHHHH
T ss_pred CCCHHHHH-------HHHHHHHHhCCcCHHHHHHHHHHHHhcCCH----------HHHHHHHHHHHHhCchhhHHHHH
Confidence 78888888 899999999999999999999999999999 99999999999999998654433
No 299
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=92.71 E-value=1.6 Score=43.44 Aligned_cols=81 Identities=16% Similarity=0.005 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHhCCC--------C--H------------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHh
Q 010976 186 LEEACKKYDEATRLCPT--------L--H------------DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQ 243 (496)
Q Consensus 186 ~~~A~~~~~~Al~l~P~--------~--~------------~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~ 243 (496)
.+.|...+++|+.+-.. . . .+...++.++.. .|++.+++ ..+.+++.
T Consensus 131 ~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~----~g~~~~a~-------~~l~~~~~ 199 (388)
T 2ff4_A 131 FEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIA----CGRASAVI-------AELEALTF 199 (388)
T ss_dssp HHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHH----TTCHHHHH-------HHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCHHHHH-------HHHHHHHH
Confidence 77888888888877321 1 0 122334444445 88888888 89999999
Q ss_pred cCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHH
Q 010976 244 LNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQ 287 (496)
Q Consensus 244 l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~ 287 (496)
.+|-+-.+|..+-.+|...|+. .+|+..|++.-+
T Consensus 200 ~~P~~E~~~~~lm~al~~~Gr~----------~~Al~~y~~~r~ 233 (388)
T 2ff4_A 200 EHPYREPLWTQLITAYYLSDRQ----------SDALGAYRRVKT 233 (388)
T ss_dssp HSTTCHHHHHHHHHHHHTTTCH----------HHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHH
Confidence 9999999999999999999999 999999888644
No 300
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=92.49 E-value=0.2 Score=42.78 Aligned_cols=35 Identities=29% Similarity=0.256 Sum_probs=28.8
Q ss_pred CCCeeeEeecCC---ceeeeecChhhhhhHHHHHHHHH
Q 010976 445 PGAGLCIETIHG---PVFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 445 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
.-++|+|.+... +.+|-|+|-+++.+|+.||+=+.
T Consensus 110 ~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa 147 (150)
T 2fjl_A 110 RLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVA 147 (150)
T ss_dssp CSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHH
Confidence 457899986544 56899999999999999998663
No 301
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=92.12 E-value=0.071 Score=53.50 Aligned_cols=95 Identities=15% Similarity=0.298 Sum_probs=57.7
Q ss_pred hhhccccCCCCCCCCCChhhhhhhcccc--chhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCC
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVL--NHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL 441 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
++.|+|..... ....|.++||+| ...-|..+...+. ..+...|+|.++..+......
T Consensus 147 ~keG~L~KrG~-----~~k~WkrRwFVL~~~~~~L~Yy~~~~~----------------~~p~g~I~L~~~~~~~~~~~~ 205 (386)
T 3lju_X 147 YREGFLWKRGR-----DNGQFLSRKFVLTEREGALKYFNRNDA----------------KEPKAVMKIEHLNATFQPAKI 205 (386)
T ss_dssp EEEEEEEEECS-----SSCCEEEEEEEEETTTTEEEEEC---------------------CCSEEEEGGGEEEEECHHHH
T ss_pred ccccceeeecc-----ccCCceEEEEEEEcCCCEEEEECCCCc----------------cCcccEEEeeccEEEEccccc
Confidence 45788876532 245799999999 4455555432211 234667888887655532233
Q ss_pred CCCCCCeeeEee-cCCc-eeeeecChhhhhhHHHHHHHHH
Q 010976 442 TLPPGAGLCIET-IHGP-VFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 442 ~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
.-|-|+.+.... .... .||.|+|.++++.|++||+.+.
T Consensus 206 ~~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~ 245 (386)
T 3lju_X 206 GHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAAR 245 (386)
T ss_dssp TSTTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEecCCCceEEEEEcCCHHHHHHHHHhhhhcc
Confidence 444444443221 1112 3888999999999999999763
No 302
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=92.08 E-value=0.11 Score=51.27 Aligned_cols=92 Identities=16% Similarity=0.195 Sum_probs=57.5
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCC
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTL 443 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
...|||..... ....|.++||+|....|..+..... ......|+|..+. |..+.+.
T Consensus 214 ~k~G~L~K~g~-----~~k~WkkRwFVL~~~~L~Yyk~~~~----------------~~p~G~I~L~~~~-v~~~~~~-- 269 (347)
T 2r09_A 214 DREGWLLKLGG-----RVKTWKRRWFILTDNCLYYFEYTTD----------------KEPRGIIPLENLS-IREVEDP-- 269 (347)
T ss_dssp CEEEEEEEECS-----SSCCEEEEEEEEETTEEEEESSTTC----------------SSCSEEEECTTCE-EEEECCS--
T ss_pred ccCCeeEecCC-----CcccceeEEEEEcCCEEEEEcCCCc----------------cCCcEEEEcCCeE-EEEccCC--
Confidence 45788865422 2457999999998766665432221 1123456776553 4433322
Q ss_pred CCCCeeeEeecC---------------------Cc-eeeeecChhhhhhHHHHHHHHH
Q 010976 444 PPGAGLCIETIH---------------------GP-VFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 444 ~~~~~~~~~~~~---------------------~~-~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
...++|.|.+.. +. .||.|+|.++++.|++||+.+.
T Consensus 270 ~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai 327 (347)
T 2r09_A 270 RKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASI 327 (347)
T ss_dssp SCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHH
Confidence 234556665432 12 3789999999999999999764
No 303
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=91.13 E-value=0.18 Score=50.53 Aligned_cols=95 Identities=21% Similarity=0.288 Sum_probs=56.9
Q ss_pred hhhhccccCCCCCCCCCChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCC
Q 010976 363 YLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLT 442 (496)
Q Consensus 363 ~l~~g~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
..+.|||....... .....|.++||+|....|..... .. . .....|+|... +|.++.+
T Consensus 278 ~~k~G~L~K~~~~~--~~~~~WkkRwfvL~~~~L~y~k~-~~-------------~---~~~~~i~l~~~-~v~~~~~-- 335 (385)
T 2q13_A 278 TRKAGYLNARNKTG--LVSSTWDRQFYFTQGGNLMSQAR-GD-------------V---AGGLAMDIDNC-SVMAVDC-- 335 (385)
T ss_dssp SCCEEEEEEC----------CCEEEEEEEETTEEEEECS-SC-------------S---SCEEEEECTTC-EEEEECC--
T ss_pred ccEEEEEEEecCCC--CCcCCceeEEEEEECCEEEEecC-CC-------------c---CCCceEEccce-EEEeccc--
Confidence 35678877652211 02236999999998766643222 10 0 11234555432 2333322
Q ss_pred CCCCCeeeEeecCC--ceeeeecChhhhhhHHHHHHHHH
Q 010976 443 LPPGAGLCIETIHG--PVFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 443 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
..+.++|.|.|..| ..+|.|+|.++++.|+.||+-+.
T Consensus 336 ~~r~~~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~ 374 (385)
T 2q13_A 336 EDRRYCFQITSFDGKKSSILQAESKKDHEEWICTINNIS 374 (385)
T ss_dssp TTCSSEEEEECTTSCBCCCEECSSHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 34668899988775 34899999999999999998763
No 304
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=90.79 E-value=0.39 Score=36.68 Aligned_cols=45 Identities=27% Similarity=0.199 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010976 185 LLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNS 248 (496)
Q Consensus 185 ~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~ 248 (496)
..++|+.+..+|++.| . .|++.+|+.+|.+|++.|..++...|+.
T Consensus 15 ~~~~Ai~lv~~Ave~D---------------~----~g~y~eAl~lY~~aie~l~~alk~e~d~ 59 (83)
T 2w2u_A 15 LEEMARKYAINAVKAD---------------K----EGNAEEAITNYKKAIEVLAQLVSLYRDG 59 (83)
T ss_dssp HHHHHHHHHHHHHHHH---------------H----TTCHHHHHHHHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHHHHHH---------------H----hccHHHHHHHHHHHHHHHHHHHHHCCCH
Confidence 4677888888886653 3 9999999999999999999999887653
No 305
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=90.78 E-value=0.22 Score=40.76 Aligned_cols=94 Identities=14% Similarity=0.314 Sum_probs=58.2
Q ss_pred hccccCCCCCCCCCChh-hhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccC---C
Q 010976 366 AGYLTAPPAGIPVAPHS-DWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD---L 441 (496)
Q Consensus 366 ~g~l~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 441 (496)
.|++..+.. ..... .|.+++|+|....|..+........ ......|++..+.+|+++.. .
T Consensus 4 eGwl~~pk~---~~~~k~~Wkkr~~vL~~~kL~~y~~~~~~~~-------------~~p~~~Idl~~~~~V~~V~~~d~i 67 (117)
T 2rov_A 4 EGWLSLPVR---NNTKKFGWVKKYVIVSSKKILFYDSEQDKEQ-------------SNPYMVLDIDKLFHVRPVTQTDVY 67 (117)
T ss_dssp EEEEECCCC---SSSSCCCCCEEEEEEETTEEEEESCHHHHHT-------------TCCSEEECGGGEEEEEECCTTTCS
T ss_pred EEEEEeecC---CCccCCCcEEEEEEEECCEEEEEECCCCccc-------------CCceEEEECcccEEEEEccccccc
Confidence 477765322 12233 7999999998777776544222110 12244677777777665533 1
Q ss_pred -----CCCCCCeeeEeecC------CceeeeecChhhhhhHHHHHHH
Q 010976 442 -----TLPPGAGLCIETIH------GPVFLVADSWEALDGWLDAIRL 477 (496)
Q Consensus 442 -----~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~a~~~ 477 (496)
.+| ..|.|-+.. ...||.|+|.++...|+.||+-
T Consensus 68 ~~~~~~~p--~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~ 112 (117)
T 2rov_A 68 RADAKEIP--RIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVK 112 (117)
T ss_dssp SSCTTTGG--GEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHH
T ss_pred ccccccCC--cEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHH
Confidence 123 456665432 3469999999999999999973
No 306
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=90.76 E-value=0.46 Score=39.41 Aligned_cols=89 Identities=13% Similarity=0.069 Sum_probs=55.1
Q ss_pred hhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCCCCCeeeEeec-CCce-
Q 010976 381 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETI-HGPV- 458 (496)
Q Consensus 381 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 458 (496)
...|.|+||+|-...|..+....-+. .........+.-.|||.. ..|+.+.+.+ .-++|.|.+. .|-+
T Consensus 21 ~ksWkr~W~vL~g~~L~yf~~~~~~~-------~~~~~~~~~P~~~i~L~g-~~V~~~e~~~--~~~~F~L~~~~~G~~Y 90 (126)
T 2dtc_A 21 LSSWTRYWVVLSGATLLYYGAKSLRG-------TDRKHYKSTPGKKVSIVG-WMVQLPDDPE--HPDIFQLNNPDKGNVY 90 (126)
T ss_dssp SCCCEEEEEEEETTEEEEEEBSSSCC-------SSGGGBCSSCSEEEECTT-CEEECCCCTT--STTEEEEECTTSCSEE
T ss_pred ccCcccEEEEEeCCEEEEEccccccc-------ccccccccCCCceEEeCC-CEEEecCCCC--CCCEEEEeeCCCCCEE
Confidence 45899999999877777655321110 000011123344677753 3444444433 5677887766 5666
Q ss_pred eeeecChhhhhhHHHHHHHHH
Q 010976 459 FLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 459 ~~~~~~~~~~~~~~~a~~~~~ 479 (496)
.|-|+|.++++.|+.||+-+-
T Consensus 91 ~fqA~s~~~~~~W~~ai~~a~ 111 (126)
T 2dtc_A 91 KFQTGSRFHAILWHKHLDDAC 111 (126)
T ss_dssp EEECSSHHHHHHHHHHHHHHH
T ss_pred EEeCCCHHHHHHHHHHHHHHH
Confidence 566779999999999998754
No 307
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=90.63 E-value=2.2 Score=37.44 Aligned_cols=99 Identities=12% Similarity=-0.018 Sum_probs=66.3
Q ss_pred hhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010976 134 RQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIA 213 (496)
Q Consensus 134 ~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~ 213 (496)
..|+++.|.+..++. ++...|..||......|+ ++-|+.+|+++= +.. .+..+
T Consensus 17 ~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn--------------~~lAe~cy~~~~-----D~~---~L~~L 69 (177)
T 3mkq_B 17 EYGNLDAALDEAKKL-----NDSITWERLIQEALAQGN--------------ASLAEMIYQTQH-----SFD---KLSFL 69 (177)
T ss_dssp HTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTC--------------HHHHHHHHHHTT-----CHH---HHHHH
T ss_pred hcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCC--------------hHHHHHHHHHhC-----CHH---HHHHH
Confidence 368999999887765 678999999999999999 999999999873 322 33344
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHH
Q 010976 214 ISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAA 285 (496)
Q Consensus 214 ~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~A 285 (496)
|.. .|+.+.-. ..-+.+.... + ++....+++.+|++ +++++.|.+.
T Consensus 70 y~~----tg~~e~L~-------kla~iA~~~g-~----~n~af~~~l~lGdv----------~~~i~lL~~~ 115 (177)
T 3mkq_B 70 YLV----TGDVNKLS-------KMQNIAQTRE-D----FGSMLLNTFYNNST----------KERSSIFAEG 115 (177)
T ss_dssp HHH----HTCHHHHH-------HHHHHHHHTT-C----HHHHHHHHHHHTCH----------HHHHHHHHHT
T ss_pred HHH----hCCHHHHH-------HHHHHHHHCc-c----HHHHHHHHHHcCCH----------HHHHHHHHHC
Confidence 455 67665544 2222222221 1 12233556778888 8888777554
No 308
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=90.50 E-value=0.42 Score=36.48 Aligned_cols=45 Identities=20% Similarity=0.119 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH
Q 010976 186 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP 249 (496)
Q Consensus 186 ~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~ 249 (496)
.+.|+.+..+|++.| . .|++.+|+.+|.+|++.|..++...|+..
T Consensus 8 ~~~Ai~lv~~Ave~D---------------~----~g~y~eAl~lY~~aie~l~~~lk~e~d~~ 52 (83)
T 2v6y_A 8 EDMARKYAILAVKAD---------------K----EGKVEDAITYYKKAIEVLSQIIVLYPESV 52 (83)
T ss_dssp HHHHHHHHHHHHHHH---------------H----TTCHHHHHHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHHH---------------H----hccHHHHHHHHHHHHHHHHHHHHHCCCHH
Confidence 667888888886653 3 99999999999999999999998876543
No 309
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=90.45 E-value=0.45 Score=39.34 Aligned_cols=88 Identities=15% Similarity=0.256 Sum_probs=62.3
Q ss_pred ChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCC-CCCeeeEeecCCce
Q 010976 380 PHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLP-PGAGLCIETIHGPV 458 (496)
Q Consensus 380 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 458 (496)
....|++++|+|-+.+-...-..|=.. . .-.+.+++.|+...|..|..|..+-+| .-..|.+.+..+-.
T Consensus 38 ~~~~W~k~RLvL~k~g~G~~y~LEfy~-----P-----PkssKpK~~i~cs~I~EVR~tt~LEmPD~~nTFVlK~~n~~e 107 (136)
T 1v5m_A 38 GTAQWQKCRLLLRRAVAGERFRLEFFV-----P-----PKASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENGAE 107 (136)
T ss_dssp CSCCCEEEEEEEEECSSSCCEEEEEES-----S-----TTSSSCSSCEETTTCCBCCCCCCSSSCCCTTEECCBCTTSCB
T ss_pred cccchhheeeEEEEccCCCceEEEEec-----C-----CcccCCccccchhhhhhhhhccccccCCccceEEEEecCCcE
Confidence 456899999998654211100001000 0 011346889999999999999999999 77788888777744
Q ss_pred -eeeecChhhhhhHHHHHHH
Q 010976 459 -FLVADSWEALDGWLDAIRL 477 (496)
Q Consensus 459 -~~~~~~~~~~~~~~~a~~~ 477 (496)
+|-++|..++..|+..|+-
T Consensus 108 yi~ea~d~~q~~sWla~Ir~ 127 (136)
T 1v5m_A 108 YILETIDSLQKHSWVADIQG 127 (136)
T ss_dssp EEEECSSHHHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHh
Confidence 7778899999999999964
No 310
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=89.92 E-value=5 Score=40.02 Aligned_cols=96 Identities=15% Similarity=0.021 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHH
Q 010976 208 YNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN--SPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAA 285 (496)
Q Consensus 208 ~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~--~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~A 285 (496)
..||..|.+ .|+|.+|++.+.+....+.+ ++.. -.+.+..-..+|..++++ ..+...|.+|
T Consensus 103 ~kL~~l~~~----~~~y~~a~~~i~~l~~~~~~---~dd~~~llev~lle~~~~~~~~n~----------~k~k~~l~~a 165 (394)
T 3txn_A 103 ARLIALYFD----TALYTEALALGAQLLRELKK---LDDKNLLVEVQLLESKTYHALSNL----------PKARAALTSA 165 (394)
T ss_dssp HHHHHHHHH----TTCHHHHHHHHHHHHHHHTT---SSCTHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHH
T ss_pred HHHHHHHHH----hhhHHHHHHHHHHHHHHHhc---cccchhHHHHHHHHHHHHHHhccH----------HHHHHHHHHH
Confidence 478999999 99999999776665555543 2221 245666777888888888 9999999998
Q ss_pred HHhc---CCCH----HHHHHHHHHHH-HcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHH
Q 010976 286 IQLQ---FDFH----RAIYNLGTVLY-GLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAH 339 (496)
Q Consensus 286 l~l~---P~~~----~a~~~lg~~~~-~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~ 339 (496)
.... +.++ .....-|..+. ..++ |..|..+|-.+.
T Consensus 166 ~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rd-------------------yk~A~~~F~eaf 208 (394)
T 3txn_A 166 RTTANAIYCPPKVQGALDLQSGILHAADERD-------------------FKTAFSYFYEAF 208 (394)
T ss_dssp HHHHHHSCCCHHHHHHHHHHHHHHHHHTTSC-------------------HHHHHHHHHHHH
T ss_pred HhhhccCCCCHHHHHHHHHHhhHHHHHhccC-------------------HHHHHHHHHHHH
Confidence 7653 1233 23344466666 6666 777777776665
No 311
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=89.56 E-value=1.4 Score=34.22 Aligned_cols=50 Identities=14% Similarity=0.087 Sum_probs=41.3
Q ss_pred chhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH
Q 010976 181 SKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP 249 (496)
Q Consensus 181 ~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~ 249 (496)
.+....+.|+....+|++.+ . .|++++|+.+|.+|++.|..++...|+..
T Consensus 7 ~~~~~l~~Ai~lv~~Ave~D---------------~----~g~y~eAl~~Y~~Aie~l~~alk~e~~~~ 56 (93)
T 1wfd_A 7 GQDSDSTAAVAVLKRAVELD---------------A----ESRYQQALVCYQEGIDMLLQVLKGTKESS 56 (93)
T ss_dssp CCCCHHHHHHHHHHHHHHHH---------------H----TTCHHHHHHHHHHHHHHHHHHHHTCCCHH
T ss_pred cchHHHHHHHHHHHHHHHHH---------------H----hCCHHHHHHHHHHHHHHHHHHHHHCCCHH
Confidence 34455788998888887653 3 89999999999999999999999887644
No 312
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=89.51 E-value=0.32 Score=46.30 Aligned_cols=87 Identities=17% Similarity=0.323 Sum_probs=51.9
Q ss_pred hhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCc--eeecccc-cCCCCCCCCeeeEeec---
Q 010976 381 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPD--IVSVSAC-ADLTLPPGAGLCIETI--- 454 (496)
Q Consensus 381 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~--- 454 (496)
...|.++||+|-..++.......+.. +..-...+++++ |-.+... --..-|-.++|+|...
T Consensus 171 ~k~WkkRyfvLr~sgLyy~~K~~sk~-------------~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~~~ 237 (281)
T 4gmv_A 171 KKSWKKRYFLLRASGIYYVPKGKAKV-------------SRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQ 237 (281)
T ss_dssp SSCEEEEEEEECSSCEEEC----------------------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTTCC
T ss_pred CCCCeEEEEEEeCCEEEEEeCCCCCc-------------cccceEEEEcCCcEEEEecccccccCCCCCcEEEEecCccC
Confidence 35899999999888887644322211 111122334554 2222211 1134477788888731
Q ss_pred ---CCceeeeecChhhhhhHHHHHHHHHH
Q 010976 455 ---HGPVFLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 455 ---~~~~~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
....||-|+|.++++.|..||+++-+
T Consensus 238 ~~~~~~~~~caede~~~~~Wv~Air~ak~ 266 (281)
T 4gmv_A 238 KKSQYIKYLCCDDVRTLHQWVNGIRIAKY 266 (281)
T ss_dssp SCCTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 22359999999999999999999743
No 313
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=89.08 E-value=11 Score=32.87 Aligned_cols=119 Identities=13% Similarity=0.024 Sum_probs=82.2
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010976 135 QRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAI 214 (496)
Q Consensus 135 ~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~ 214 (496)
-.+|+.++-.-.-.+ |..++-...++.+++-.|. |..++-++. +-+...+.+.-..||
T Consensus 15 Y~dYdt~~fLsa~L~---~~~~eY~lL~~I~LyyngE--------------Y~R~Lf~L~-----~lNT~Ts~YYk~LCy 72 (242)
T 3kae_A 15 YRDYETAIFLAACLL---PCKPEYRMLMSIVLYLNGE--------------YTRALFHLH-----KLNTCTSKYYESLCY 72 (242)
T ss_dssp TTCHHHHHHHHHHHC-------CTHHHHHHHHHHTTC--------------HHHHHHHHH-----TCCBHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHc---cCChHHHhhhhhhhhhcch--------------HhHHHHHHH-----hcchHHHHHHHHHHH
Confidence 356666654433333 3333445667888888888 877766543 335667777788888
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHh-----------------cCCCCHH-HHHHHHHHHHHccCcchHHHhhhhHH
Q 010976 215 SDRAKMRGRTKEAEELWKQATKNYEKAVQ-----------------LNWNSPQ-ALNNWGLALQELSAIVPAREKQTIVR 276 (496)
Q Consensus 215 ~~~~~~~g~~~eA~~~~~~A~~~~~~Al~-----------------l~P~~~~-a~~~lg~~l~~~g~~~~A~~~~~~~~ 276 (496)
.. +.++..|+ .+++..++ .||.+-+ .++.+|.++.+.|.. +
T Consensus 73 ~k----lKdYkkA~-------~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r----------~ 131 (242)
T 3kae_A 73 KK----KKDYKKAI-------KSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYR----------E 131 (242)
T ss_dssp HH----TTCHHHHH-------HHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCH----------H
T ss_pred HH----HHHHHHHH-------HHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCH----------H
Confidence 88 89999888 66666661 2455555 456789999999999 9
Q ss_pred HHHHHHHHHHHhcCCCHHHH
Q 010976 277 TAISKFRAAIQLQFDFHRAI 296 (496)
Q Consensus 277 ~Ai~~~~~Al~l~P~~~~a~ 296 (496)
+||.+|.....++|-++.+-
T Consensus 132 EaI~y~~~Sf~~~~lf~~vE 151 (242)
T 3kae_A 132 EGIGHYVRSFGKSFLFSPVE 151 (242)
T ss_dssp HHHHHHHHHHHHCCCHHHHH
T ss_pred HhhhHhhhhcCCccccchHH
Confidence 99999999999998766543
No 314
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=88.94 E-value=1.8 Score=33.30 Aligned_cols=44 Identities=25% Similarity=0.184 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHH
Q 010976 205 DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALN 253 (496)
Q Consensus 205 ~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~ 253 (496)
..+-.++..+.. .|+|++||++.++|..++..|+.+- .+..++.
T Consensus 16 H~~~RrAe~ll~----~gkydeAIech~kAa~yL~eAmklt-qs~qa~~ 59 (97)
T 2crb_A 16 HQQSRRADRLLA----AGKYEEAISCHRKATTYLSEAMKLT-ESEQAHL 59 (97)
T ss_dssp HHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHHTTC-CCHHHHH
T ss_pred hHhhhHHHHHHh----cCCHHHHHHHHHHHHHHHHHHHHhh-ccHHHHH
Confidence 345566677777 9999999999999999999999997 5666554
No 315
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=88.22 E-value=1.2 Score=36.35 Aligned_cols=47 Identities=19% Similarity=0.262 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHH
Q 010976 185 LLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQ 250 (496)
Q Consensus 185 ~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~ 250 (496)
.++.|+.+..+|+.. -. .|+|++|+.+|.+|+++|..++...+.+..
T Consensus 14 ~l~kAi~lv~~Ave~---------------D~----ag~y~eAl~lY~~Aie~l~~alk~e~~~~~ 60 (117)
T 2cpt_A 14 NLQKAIDLASKAAQE---------------DK----AGNYEEALQLYQHAVQYFLHVVKYEAQGDK 60 (117)
T ss_dssp HHHHHHHHHHHHHHH---------------HH----HTCHHHHHHHHHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHHHHHH---------------HH----ccCHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 578888888888744 23 899999999999999999999998866655
No 316
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=85.86 E-value=0.79 Score=43.49 Aligned_cols=91 Identities=14% Similarity=0.215 Sum_probs=53.2
Q ss_pred ChhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCCCCCeeeEeecCCce-
Q 010976 380 PHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPV- 458 (496)
Q Consensus 380 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 458 (496)
....|.++|++|....|.-+.......... .......|+|+.-.. +.+.|-+ -.-++|+|.|.+|.+
T Consensus 35 ~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~----------~~~p~~~I~L~ga~v-~~a~d~~-kKk~vF~L~t~~g~~y 102 (279)
T 3a8n_A 35 TRRKWKHYWVSLKGCTLFFYETDGRSGIDH----------NSVPKHAVWVENSIV-QAVPEHP-KKDFVFCLSNSLGDAF 102 (279)
T ss_dssp CCCCCEEEEEEEETTEECCBCCC------------------CCCSSCCBCCSCEE-CCCTTSS-SSCSCCCEEETTTEEE
T ss_pred cCCCCeEEEEEEeCCEEEEEeccccccccc----------ccCCCceEeccCcEE-EeccccC-CCCcEEEEEcCCCCEE
Confidence 346899999999766665543322211000 001122344443222 2222211 134789998888877
Q ss_pred eeeecChhhhhhHHHHHHHHHHHH
Q 010976 459 FLVADSWEALDGWLDAIRLVYTIY 482 (496)
Q Consensus 459 ~~~~~~~~~~~~~~~a~~~~~~~~ 482 (496)
+|-|+|.+++..|+.||..+...+
T Consensus 103 LFQA~s~eEm~~WI~aI~~a~~~~ 126 (279)
T 3a8n_A 103 LFQTTSQTELENWITAIHSACAAA 126 (279)
T ss_dssp ECCCSCHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCHHHHHHHHHHHHHHHhhh
Confidence 556889999999999999887643
No 317
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.45 E-value=0.66 Score=38.82 Aligned_cols=85 Identities=12% Similarity=0.274 Sum_probs=49.2
Q ss_pred hhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCC-CCCeeeEeecC--C-
Q 010976 381 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLP-PGAGLCIETIH--G- 456 (496)
Q Consensus 381 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~- 456 (496)
...|.++||++....|-..-..+... +.+.-.|+|.... |.| |+++. -.++|.+-+.. |
T Consensus 25 lK~~KrrWFvlk~~~L~YyK~kee~~--------------~ePig~I~L~gce-V~p--d~~~~~~kf~ikl~iPs~~g~ 87 (137)
T 2ys3_A 25 LKGYRQHWVVFKETTLSYYKSQDEAP--------------GDPIQQLNLKGCE-VVP--DVNVSGQKFCIKLLVPSPEGM 87 (137)
T ss_dssp SSSSCCCEEEECSSCEEEESSTTTTT--------------SCCSCCBCTTTCE-EEE--CCBGGGTBEEEEEEEECSSSE
T ss_pred cccceeEEEEEeCCEEEEECCchhcc--------------CCCceEEECCCCE-Eec--cccccCCceEEEEEccCCCCc
Confidence 34789999999877766652222210 1122233333211 222 22222 45555555321 1
Q ss_pred -ceeeeecChhhhhhHHHHHHHHHHHHhhcc
Q 010976 457 -PVFLVADSWEALDGWLDAIRLVYTIYARGK 486 (496)
Q Consensus 457 -~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 486 (496)
-+||.+||.+..+.|..|++++ .+||
T Consensus 88 r~y~l~cdsEeqy~~WMaA~rlA----skgk 114 (137)
T 2ys3_A 88 SEIYLRCQDEQQYARWMAGCRLA----SKGR 114 (137)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHH----HTSC
T ss_pred eEEEEECCCHHHHHHHHHHHHHh----ccCc
Confidence 2699999999999999999965 4675
No 318
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=85.12 E-value=0.83 Score=42.79 Aligned_cols=87 Identities=24% Similarity=0.400 Sum_probs=54.4
Q ss_pred hhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccC---CCCCCCCeeeEeecCC-
Q 010976 381 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACAD---LTLPPGAGLCIETIHG- 456 (496)
Q Consensus 381 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~- 456 (496)
...|.++||+|-..++.......... +..-...+++.+..-..+... ..-|-.++|+|....-
T Consensus 145 ~K~WkkRyfvLr~sgLy~~~k~~sk~-------------~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k~~ 211 (256)
T 3hk0_A 145 KKSWKKLYVCLRRSGLYCSTKGTSAA-------------PRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVR 211 (256)
T ss_dssp SSCEEEEEEEEETTEEEEESSTTCCC-------------GGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETTCS
T ss_pred CCcceEEEEEEeCCEEEEEecCCCCc-------------cccceEEEEcCCCEEEEecccccccCCCCCCEEEEEccccc
Confidence 46899999999988886544332211 111122345554433333322 3556667777762211
Q ss_pred -----ceeeeecChhhhhhHHHHHHHHHH
Q 010976 457 -----PVFLVADSWEALDGWLDAIRLVYT 480 (496)
Q Consensus 457 -----~~~~~~~~~~~~~~~~~a~~~~~~ 480 (496)
-.||-|+|.+++..|..||+++.+
T Consensus 212 ~~~~~~~~lcaede~~~~~W~~aIr~ak~ 240 (256)
T 3hk0_A 212 NETKELRLLCAEDEQTRTSWMTAFRLLKY 240 (256)
T ss_dssp SCCTTCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 259999999999999999999753
No 319
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=84.44 E-value=1.5 Score=33.40 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010976 185 LLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNS 248 (496)
Q Consensus 185 ~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~ 248 (496)
.++.|+....+|+.. -. .|++++|+.+|.+|++.|..++...++.
T Consensus 9 ~l~~A~~l~~~Av~~---------------D~----~g~y~eAl~~Y~~aie~l~~a~k~e~~~ 53 (85)
T 2v6x_A 9 FLTKGIELVQKAIDL---------------DT----ATQYEEAYTAYYNGLDYLMLALKYEKNP 53 (85)
T ss_dssp HHHHHHHHHHHHHHH---------------HH----TTCHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHHHHH---------------HH----cCCHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 367888888888643 23 8999999999999999999999888653
No 320
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=83.93 E-value=0.81 Score=39.45 Aligned_cols=85 Identities=15% Similarity=0.271 Sum_probs=51.9
Q ss_pred hhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCCCC-CeeeEeecCC---
Q 010976 381 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPG-AGLCIETIHG--- 456 (496)
Q Consensus 381 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--- 456 (496)
...|+++||++....|..+-..+... +.+...|+|.. -+..-|++|..+ +++++- ++.
T Consensus 63 LKgyKryWFv~kd~~LsyYKskEe~~--------------geP~~~I~LrG---CEVtpDVnva~~Kf~IkL~-vP~~~g 124 (173)
T 4f7h_A 63 LKGYKQYWCTFKDTSISCYKSKEESS--------------GTPAHQMNLRG---CEVTPDVNISGQKFNIKLL-IPVAEG 124 (173)
T ss_dssp CCCCEEEEEEEETTEEEEESCGGGCS--------------SCCSEEEECTT---CEEEEEEETTTTEEEEEEE-EEETTE
T ss_pred cccceeEEEEEeCCEEEEEcCHhHhc--------------CCCceEEecCc---eEEeccccccccceeEEEe-ccCCCC
Confidence 45799999999777666654444421 12233344331 111123455533 455554 222
Q ss_pred --ceeeeecChhhhhhHHHHHHHHHHHHhhccc
Q 010976 457 --PVFLVADSWEALDGWLDAIRLVYTIYARGKA 487 (496)
Q Consensus 457 --~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 487 (496)
-+||.+++....+.|.-|.+| +.|||+
T Consensus 125 m~e~~Lrcd~E~qya~WMAAcrL----AskGkt 153 (173)
T 4f7h_A 125 MNEIWLRCDNEKQYAHWMAACRL----ASKGKT 153 (173)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHH----HHTTCC
T ss_pred cceeeeecCCHHHHHHHHHHhhh----hccCCc
Confidence 279999999999999999987 568874
No 321
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=81.60 E-value=2.9 Score=42.28 Aligned_cols=104 Identities=13% Similarity=0.016 Sum_probs=74.0
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHHHHcCCHHHHHH
Q 010976 153 PEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT---LHDAFYNWAIAISDRAKMRGRTKEAEE 229 (496)
Q Consensus 153 P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~---~~~a~~~lg~~~~~~~~~~g~~~eA~~ 229 (496)
..-..++..+|..|...|+ +++|.++|.++...+.. -.+.+...-.++.. .+++..+..
T Consensus 128 ~e~~~~~~~la~~~~~~Gd--------------~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~----~~d~~~~~~ 189 (429)
T 4b4t_R 128 LEQAQAWINLGEYYAQIGD--------------KDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFF----YNDQLYVKE 189 (429)
T ss_dssp CCCSSCCHHHHHHHHHHCC--------------CTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHH----HTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC--------------HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH----hccHHHHHH
Confidence 3345678999999999999 99999999999887543 34677777777777 999999996
Q ss_pred HHHHHHHHHHHHHhcCCCCHH----HHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhc
Q 010976 230 LWKQATKNYEKAVQLNWNSPQ----ALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ 289 (496)
Q Consensus 230 ~~~~A~~~~~~Al~l~P~~~~----a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~ 289 (496)
.+.+|...... . .++. .....|.++...++| .+|-..|..++.-.
T Consensus 190 ~~~ka~~~~~~----~-~d~~~~~~lk~~~gl~~l~~r~f----------~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 190 KLEAVNSMIEK----G-GDWERRNRYKTYYGIHCLAVRNF----------KEAAKLLVDSLATF 238 (429)
T ss_dssp HHHHHHHHHTT----C-CCTHHHHHHHHHHHHGGGGTSCH----------HHHHHHHHHHHHHS
T ss_pred HHHHHHHhhhc----C-CCHHHHHHHHHHHHHHHHHhChH----------HHHHHHHHHHhccC
Confidence 55555433321 2 2222 233445566666666 99999998887653
No 322
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=81.39 E-value=9.6 Score=37.93 Aligned_cols=124 Identities=13% Similarity=-0.020 Sum_probs=80.7
Q ss_pred ccHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCC------C
Q 010976 136 RILTFAAKRYANAIERNPEDYD------ALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPT------L 203 (496)
Q Consensus 136 g~~~~Ai~~~~~al~~~P~~~~------a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~------~ 203 (496)
+..+.=++.+..+++..-+.-. .-..+|.+|+..|+ |.+|.+.+.+.++-... .
T Consensus 73 ~~~~~~~~~~~~~~~~a~~~~r~flr~~l~~kL~~l~~~~~~--------------y~~a~~~i~~l~~~~~~~dd~~~l 138 (394)
T 3txn_A 73 AGTGIEVQLCKDCIEWAKQEKRTFLRQSLEARLIALYFDTAL--------------YTEALALGAQLLRELKKLDDKNLL 138 (394)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHHTTSSCTHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------------HHHHHHHHHHHHHHHhccccchhH
Confidence 3344455666666654322211 22378999999999 99999999998885322 2
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHH-HccCcchHHHhhhhHHHHHHH
Q 010976 204 HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN-SPQALNNWGLALQ-ELSAIVPAREKQTIVRTAISK 281 (496)
Q Consensus 204 ~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~-~~g~~~~A~~~~~~~~~Ai~~ 281 (496)
.+.+..-..+|.. ++++.++...|.+|...-. ++-.+|. .+.....-|..+. ..++| .+|-..
T Consensus 139 lev~lle~~~~~~----~~n~~k~k~~l~~a~~~~~-ai~~~p~i~a~i~~~~Gi~~l~~~rdy----------k~A~~~ 203 (394)
T 3txn_A 139 VEVQLLESKTYHA----LSNLPKARAALTSARTTAN-AIYCPPKVQGALDLQSGILHAADERDF----------KTAFSY 203 (394)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHTTSCH----------HHHHHH
T ss_pred HHHHHHHHHHHHH----hccHHHHHHHHHHHHhhhc-cCCCCHHHHHHHHHHhhHHHHHhccCH----------HHHHHH
Confidence 2445555666777 9999999976666655433 2212222 2334455577777 78888 999888
Q ss_pred HHHHHHh
Q 010976 282 FRAAIQL 288 (496)
Q Consensus 282 ~~~Al~l 288 (496)
|-++++-
T Consensus 204 F~eaf~~ 210 (394)
T 3txn_A 204 FYEAFEG 210 (394)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 8888753
No 323
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=80.64 E-value=35 Score=38.36 Aligned_cols=99 Identities=10% Similarity=-0.121 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 010976 156 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL----CPTLHDAFYNWAIAISDRAKMRGRTKEAEELW 231 (496)
Q Consensus 156 ~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l----~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~ 231 (496)
...+..+-..|.+.|+ +++|...|.+.-+. ..-+...|+-+-..|.. .|+.++|.
T Consensus 127 ~~TynaLIdglcK~G~--------------leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck----~G~~~eA~--- 185 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQ--------------LPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWAR----QGAFKELV--- 185 (1134)
T ss_dssp HHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHH----HTCHHHHH---
T ss_pred HHHHHHHHHHHHhCCC--------------HHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHh----CCCHHHHH---
Confidence 3457778888999999 99999999775432 23367789999999999 99999999
Q ss_pred HHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhc
Q 010976 232 KQATKNYEKAVQ--LNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQ 289 (496)
Q Consensus 232 ~~A~~~~~~Al~--l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~ 289 (496)
+.|++..+ +.| +...|+.+-.++.+.|+. .++|...|++..+..
T Consensus 186 ----~Lf~eM~~~G~~P-DvvTYntLI~glcK~G~~---------~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 186 ----YVLFMVKDAGLTP-DLLSYAAALQCMGRQDQD---------AGTIERCLEQMSQEG 231 (1134)
T ss_dssp ----HHHHHHHHTTCCC-CHHHHHHHHHHHHHHTCC---------HHHHHHHHHHHHHHT
T ss_pred ----HHHHHHHHcCCCC-cHHHHHHHHHHHHhCCCc---------HHHHHHHHHHHHHcC
Confidence 66666654 345 778888888899999985 156777888777653
No 324
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.64 E-value=4.2 Score=32.80 Aligned_cols=43 Identities=14% Similarity=0.225 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 010976 186 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN 247 (496)
Q Consensus 186 ~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~ 247 (496)
+++|..+..+||.++ . .|+-++|+++|+++|..++++|.+..+
T Consensus 19 h~~AF~~Is~AL~~D---------------E----~g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTD---------------E----LGQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHH---------------H----HTCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHhhhh---------------h----cCCHHHHHHHHHHHHHHHHHhcccccc
Confidence 566666666666543 4 799999999999999999999998764
No 325
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=79.23 E-value=31 Score=29.99 Aligned_cols=79 Identities=13% Similarity=0.005 Sum_probs=60.4
Q ss_pred hHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHH--h----------
Q 010976 132 RSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATR--L---------- 199 (496)
Q Consensus 132 ~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~--l---------- 199 (496)
++..|+|..++-++. +-+...+.+-...||..+.+ |..|+.++++.+. .
T Consensus 43 LyyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~klKd--------------YkkA~~~le~il~~kvd~d~~~d~~~ 103 (242)
T 3kae_A 43 LYLNGEYTRALFHLH-----KLNTCTSKYYESLCYKKKKD--------------YKKAIKSLESILEGKVERDPDVDARI 103 (242)
T ss_dssp HHHTTCHHHHHHHHH-----TCCBHHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHTTCSBCCCCCCHHH
T ss_pred hhhcchHhHHHHHHH-----hcchHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHhcccccCccccccc
Confidence 445688888776653 34567888888999999999 9999999999993 2
Q ss_pred -----CCCCHHH-HHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 010976 200 -----CPTLHDA-FYNWAIAISDRAKMRGRTKEAEELWKQ 233 (496)
Q Consensus 200 -----~P~~~~a-~~~lg~~~~~~~~~~g~~~eA~~~~~~ 233 (496)
+|.+.+. +..+|.++.. .|+.+||+..|..
T Consensus 104 ~~ffvd~~DkEfFy~l~a~lltq----~g~r~EaI~y~~~ 139 (242)
T 3kae_A 104 QEMFVDPGDEEFFESLLGDLCTL----SGYREEGIGHYVR 139 (242)
T ss_dssp HTTSCCTTCHHHHHHHHHHHHHH----TTCHHHHHHHHHH
T ss_pred ceeeeccchHHHHHHHHHHHHHH----hcCHHHhhhHhhh
Confidence 4555554 4567888888 9999999977643
No 326
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=78.48 E-value=33 Score=29.85 Aligned_cols=35 Identities=14% Similarity=0.056 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Q 010976 186 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEE 229 (496)
Q Consensus 186 ~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~ 229 (496)
++.|.+..+.. ++...|..||..... .|+++-|..
T Consensus 21 l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~----~gn~~lAe~ 55 (177)
T 3mkq_B 21 LDAALDEAKKL-----NDSITWERLIQEALA----QGNASLAEM 55 (177)
T ss_dssp HHHHHHHHHHH-----CCHHHHHHHHHHHHH----TTCHHHHHH
T ss_pred HHHHHHHHHHh-----CCHHHHHHHHHHHHH----cCChHHHHH
Confidence 88888887655 678899999999999 999999993
No 327
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=78.17 E-value=5.8 Score=30.25 Aligned_cols=45 Identities=11% Similarity=0.086 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH
Q 010976 186 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP 249 (496)
Q Consensus 186 ~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~ 249 (496)
-..|+....+|++. -. .|++++|+.+|.+|++.|..++...|+..
T Consensus 13 ~~~A~~lv~~Ave~---------------D~----~g~y~eAl~lY~~Aie~ll~alk~e~d~~ 57 (86)
T 4a5x_A 13 STAAATVLKRAVEL---------------DS----ESRYPQALVCYQEGIDLLLQVLKGTKDNT 57 (86)
T ss_dssp HHHHHHHHHHHHHH---------------HH----TTCHHHHHHHHHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHH---------------HH----cCCHHHHHHHHHHHHHHHHHHHhhCCCHH
Confidence 44566666666654 34 99999999999999999999999887643
No 328
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=77.68 E-value=37 Score=38.71 Aligned_cols=102 Identities=12% Similarity=-0.101 Sum_probs=72.7
Q ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-------------HHHHHHhc---CCCCHHHHHHHHHHH
Q 010976 196 ATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATK-------------NYEKAVQL---NWNSPQALNNWGLAL 259 (496)
Q Consensus 196 Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~-------------~~~~Al~l---~P~~~~a~~~lg~~l 259 (496)
.+...|.++...|.+|.++.. .|++++|.++|++|.. ........ ....+..|..+..++
T Consensus 834 l~~~~~~~~~~~yl~g~~~L~----~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LF 909 (1139)
T 4fhn_B 834 LIGWLNSDPIAVYLKALIYLK----SKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKL 909 (1139)
T ss_dssp HHHHSCCCHHHHHHHHHHHHH----TTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHH
T ss_pred HhhhccCCcHHHHHHHHHHHh----cCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHH
Confidence 455688888888999999999 9999999987766421 11111221 222456677788888
Q ss_pred HHccCcchHHHhhhhHHHHHHHHHHHHHhcC-CCHH----HHHHHHHHHHHcchhHH
Q 010976 260 QELSAIVPAREKQTIVRTAISKFRAAIQLQF-DFHR----AIYNLGTVLYGLAEDTL 311 (496)
Q Consensus 260 ~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P-~~~~----a~~~lg~~~~~~g~~~~ 311 (496)
.+.|.+ +.+++.-+.||+..+ ++.. .|.++=..+..+|+...
T Consensus 910 e~~~~~----------~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~ 956 (1139)
T 4fhn_B 910 FEESAY----------IDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDA 956 (1139)
T ss_dssp HHTSCC----------HHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGG
T ss_pred HHcCCH----------HHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHH
Confidence 888998 999999999998754 4332 56667777777776433
No 329
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=75.73 E-value=8.3 Score=38.82 Aligned_cols=89 Identities=13% Similarity=-0.022 Sum_probs=61.3
Q ss_pred hhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 010976 182 KDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQE 261 (496)
Q Consensus 182 ~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~ 261 (496)
....+++.++.+++-..-......++..+|..|.+ .|++++|.+.|.+...... -...-...+..+-.++..
T Consensus 109 ~l~~l~~~~~~~~~~~~~e~e~~~~~~~la~~~~~----~Gd~~~A~~~~~~~~~~~~----~~~~kid~~l~~irl~l~ 180 (429)
T 4b4t_R 109 KIKELNEKIQKLEEDDEGELEQAQAWINLGEYYAQ----IGDKDNAEKTLGKSLSKAI----STGAKIDVMLTIARLGFF 180 (429)
T ss_dssp CHHHHHHHHHHHHHCCSCCCCCSSCCHHHHHHHHH----HCCCTTHHHHHHHHHHHHT----CCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhcC----ChHHHHHHHHHHHHHHHH
Confidence 34456555555544222233455688999999999 9999999955554433221 112346788888889999
Q ss_pred ccCcchHHHhhhhHHHHHHHHHHHHHh
Q 010976 262 LSAIVPAREKQTIVRTAISKFRAAIQL 288 (496)
Q Consensus 262 ~g~~~~A~~~~~~~~~Ai~~~~~Al~l 288 (496)
.+++ ..+...+.++-.+
T Consensus 181 ~~d~----------~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 181 YNDQ----------LYVKEKLEAVNSM 197 (429)
T ss_dssp HTCH----------HHHHHHHHHHHHH
T ss_pred hccH----------HHHHHHHHHHHHh
Confidence 9999 9999999998765
No 330
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=75.69 E-value=2.7 Score=35.70 Aligned_cols=78 Identities=13% Similarity=0.037 Sum_probs=51.8
Q ss_pred hhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCCCCCeeeEeecCCceeeee
Q 010976 383 DWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPVFLVA 462 (496)
Q Consensus 383 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (496)
.|+++||+|...-+..+-.+.. ...+-.||+..-.+|+..- ...|+|.|.. -+|-+.
T Consensus 65 ~~kkR~liLT~~PrL~Yvdp~~----------------~~~KGeIpls~~l~ve~k~------~~~F~I~Tp~-RtY~~~ 121 (151)
T 1w1g_A 65 FARRRQLLLTEGPHLYYVDPVN----------------KVLKGEIPWSQELRPEAKN------FKTFFVHTPN-RTYYLM 121 (151)
T ss_dssp EEEEEEEEEETTTEEEEEETTT----------------TEEEEEECCCTTCEEEESS------SSEEEEEETT-EEEEEE
T ss_pred cceeEEEEEcCCceEEEEcCcc----------------ccccceEecCCCeeEEEcC------CCEEEEECCC-ceEEEE
Confidence 4888999986543332222111 2346678888555555333 2389998654 788888
Q ss_pred cChhhhhhHHHHHHHHHHHHh
Q 010976 463 DSWEALDGWLDAIRLVYTIYA 483 (496)
Q Consensus 463 ~~~~~~~~~~~a~~~~~~~~~ 483 (496)
|+-..+..||+||.-+...+-
T Consensus 122 d~~~~AqeWv~aI~~~~~~~~ 142 (151)
T 1w1g_A 122 DPSGNAHKWCRKIQEVWRQRY 142 (151)
T ss_dssp CTTSCHHHHHHHHHHHHHHHH
T ss_pred cCccCHHHHHHHHHHHHHHHh
Confidence 898899999999998776543
No 331
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=74.66 E-value=28 Score=39.71 Aligned_cols=97 Identities=12% Similarity=-0.016 Sum_probs=68.8
Q ss_pred HHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh-----------------------CCCCH
Q 010976 148 AIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL-----------------------CPTLH 204 (496)
Q Consensus 148 al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l-----------------------~P~~~ 204 (496)
.+...|.++..-|.+|.++...|+ +++|..+|++|-.- ....+
T Consensus 834 l~~~~~~~~~~~yl~g~~~L~~ge--------------~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 899 (1139)
T 4fhn_B 834 LIGWLNSDPIAVYLKALIYLKSKE--------------AVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLS 899 (1139)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHTTC--------------HHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSH
T ss_pred HhhhccCCcHHHHHHHHHHHhcCC--------------HHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHH
Confidence 445678888888999999999999 99999999987321 11123
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCC-CCH----HHHHHHHHHHHHccCcchHH
Q 010976 205 DAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNW-NSP----QALNNWGLALQELSAIVPAR 269 (496)
Q Consensus 205 ~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P-~~~----~a~~~lg~~l~~~g~~~~A~ 269 (496)
..|+....++.. .+.++.++ +..+.||+..+ ++. ..|.++=..+..+|+|++|+
T Consensus 900 ~YY~hv~~LFe~----~~~~~~vi-------~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay 958 (1139)
T 4fhn_B 900 CYYLHLSKKLFE----ESAYIDAL-------EFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAH 958 (1139)
T ss_dssp HHHHHHHHHHHH----TSCCHHHH-------HHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGG
T ss_pred HHHHHHHHHHHH----cCCHHHHH-------HHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHH
Confidence 445555556656 78888877 56666665543 333 25778888899999995553
No 332
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=74.29 E-value=55 Score=31.26 Aligned_cols=20 Identities=25% Similarity=0.282 Sum_probs=18.5
Q ss_pred CCCHHHHHHHHHHHHHccCc
Q 010976 246 WNSPQALNNWGLALQELSAI 265 (496)
Q Consensus 246 P~~~~a~~~lg~~l~~~g~~ 265 (496)
-.++..|..+|..|++.|++
T Consensus 131 ~Gdp~LH~~~a~~~~~e~~~ 150 (312)
T 2wpv_A 131 FGDPYLHNTIGSKLLEGDFV 150 (312)
T ss_dssp TCCHHHHHHHHHHHHHTTCH
T ss_pred CCCHHHHHHHHHHHhhcCCH
Confidence 36899999999999999999
No 333
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=73.86 E-value=35 Score=38.35 Aligned_cols=86 Identities=9% Similarity=-0.068 Sum_probs=68.0
Q ss_pred hhhhHhhccHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh--CCC
Q 010976 129 EEGRSRQRILTFAAKRYANAIER----NPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL--CPT 202 (496)
Q Consensus 129 ~~~~~~~g~~~~Ai~~~~~al~~----~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l--~P~ 202 (496)
-.++++.|++++|...|.+.-+. ..-+...|+.+-..|.+.|+ +++|.+.|++..+. .|
T Consensus 134 IdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~--------------~~eA~~Lf~eM~~~G~~P- 198 (1134)
T 3spa_A 134 FKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGA--------------FKELVYVLFMVKDAGLTP- 198 (1134)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHTTCCC-
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCC--------------HHHHHHHHHHHHHcCCCC-
Confidence 34677889999999999765432 23467889999999999999 99999999999875 34
Q ss_pred CHHHHHHHHHHHHHHHHHcCCH-HHHHHHHHH
Q 010976 203 LHDAFYNWAIAISDRAKMRGRT-KEAEELWKQ 233 (496)
Q Consensus 203 ~~~a~~~lg~~~~~~~~~~g~~-~eA~~~~~~ 233 (496)
+...|+.+-.++.+ .|+. ++|.+.|++
T Consensus 199 DvvTYntLI~glcK----~G~~~e~A~~Ll~E 226 (1134)
T 3spa_A 199 DLLSYAAALQCMGR----QDQDAGTIERCLEQ 226 (1134)
T ss_dssp CHHHHHHHHHHHHH----HTCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHh----CCCcHHHHHHHHHH
Confidence 66778888888888 8884 678876654
No 334
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=73.11 E-value=3.6 Score=34.06 Aligned_cols=57 Identities=18% Similarity=0.244 Sum_probs=43.1
Q ss_pred ceeeeecCceeecccccCC--------CCCCCCeeeEeecC--CceeeeecChhhhhhHHHHHHHHH
Q 010976 423 RAIRIEVPDIVSVSACADL--------TLPPGAGLCIETIH--GPVFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
..-.|++.+|..|...... ..|+...|.|=-.+ ...+|||.|.++.+-|++.|+.+.
T Consensus 54 ~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~ 120 (131)
T 1mai_A 54 ESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKII 120 (131)
T ss_dssp TTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHH
Confidence 4678999999999987631 34566666664333 246999999999999999998654
No 335
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=72.09 E-value=4.1 Score=42.02 Aligned_cols=123 Identities=11% Similarity=-0.107 Sum_probs=52.7
Q ss_pred HhhccHHHHHHHHHHHHH-----------hCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHH----------HH
Q 010976 133 SRQRILTFAAKRYANAIE-----------RNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEA----------CK 191 (496)
Q Consensus 133 ~~~g~~~~Ai~~~~~al~-----------~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A----------~~ 191 (496)
...+++++|..+....+. +++=.+.+|+.++.++...|+ +... ..
T Consensus 147 ~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~--------------~~~~~~~~~~~~~ir~ 212 (523)
T 4b4t_S 147 WDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLAR--------------SSEEINSDNQNIILRS 212 (523)
T ss_dssp ----------------------------------------------------------------------CHHHHHHHHT
T ss_pred hccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcc--------------cccccccccchhhHHH
Confidence 345778888877765541 133445667777777776666 3332 11
Q ss_pred HHHHHHHh-----CCC-CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCC-------HHHHHHHHHH
Q 010976 192 KYDEATRL-----CPT-LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNS-------PQALNNWGLA 258 (496)
Q Consensus 192 ~~~~Al~l-----~P~-~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~-------~~a~~~lg~~ 258 (496)
.+-.+++. |+. .+..++.+-..|.. .+.++.|. ....++. .|.+ ...++.+|.+
T Consensus 213 ~Ll~~~rta~lr~D~~~qa~l~nllLRnYL~----~~~y~qA~-------~lvsk~~--fP~~~~sn~q~~rY~YY~GRI 279 (523)
T 4b4t_S 213 TMMKFLKIASLKHDNETKAMLINLILRDFLN----NGEVDSAS-------DFISKLE--YPHTDVSSSLEARYFFYLSKI 279 (523)
T ss_dssp HHHHHHHHCCSCSSSCHHHHHHHHHHHHHHH----SSCSTTHH-------HHHHHHC--SCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCcchhHHHHHHHHHHHHc----cCcHHHHH-------HHHhcCc--CCcccCCHHHHHHHHHHHHHH
Confidence 22222222 333 23445555566666 88899988 6666664 3321 4457788999
Q ss_pred HHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCC
Q 010976 259 LQELSAIVPAREKQTIVRTAISKFRAAIQLQFDF 292 (496)
Q Consensus 259 l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~ 292 (496)
+.-.++| .+|..++..|++..|.+
T Consensus 280 ~a~q~~Y----------~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 280 NAIQLDY----------STANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHTTCH----------HHHHHHHHHHTSSCSCS
T ss_pred HHHhccH----------HHHHHHHHHHHHhCCcc
Confidence 9999999 99999999999987754
No 336
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=70.20 E-value=1.9 Score=43.55 Aligned_cols=94 Identities=17% Similarity=0.267 Sum_probs=53.2
Q ss_pred hhhccccCCCCCCCCCChhhhhhhccccc-hhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCC-
Q 010976 364 LKAGYLTAPPAGIPVAPHSDWKRSQFVLN-HEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADL- 441 (496)
Q Consensus 364 l~~g~l~~~~~~~~~~~~~~~~~~~~~l~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 441 (496)
++.||+... ......|+++||+|. ...|..+..... ......||+..+..+ .|.-.
T Consensus 7 ~keG~L~K~-----g~~~k~Wk~r~fvL~~~~~l~yyk~~~~----------------~~~~~~i~l~~~~~~-~~~~~~ 64 (446)
T 4ejn_A 7 VKEGWLHKR-----GEYIKTWRPRYFLLKNDGTFIGYKERPQ----------------DVDQREAPLNNFSVA-QCQLMK 64 (446)
T ss_dssp EEEEEEEEE-----ETTTTEEEEEEEEEETTSBEEEESSCC-----------------------CCCGGGBCT-TCEEEE
T ss_pred EEEeeEEee-----ccccccccceEEEEeeCCEEEEEecCCC----------------CCccCcccccCcccc-ceeecC
Confidence 456777654 233457999999995 555554332111 011234555443221 11111
Q ss_pred -CCCCCCeeeEeecCCce----eeeecChhhhhhHHHHHHHHH
Q 010976 442 -TLPPGAGLCIETIHGPV----FLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 442 -~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~~ 479 (496)
.-+..+.|.+.+..... .+.+++.+..+.|..||+-+.
T Consensus 65 ~~~~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i 107 (446)
T 4ejn_A 65 TERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVA 107 (446)
T ss_dssp ECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCCCCceeEEEcCCCceeeeeEEecCCHHHHHHHHHHHHhhh
Confidence 12234567776555543 588999999999999999874
No 337
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=69.84 E-value=3.1 Score=35.50 Aligned_cols=86 Identities=19% Similarity=0.326 Sum_probs=51.5
Q ss_pred hhhhhhhccccchhhhhhhccccccccccccCCCCCCCCCCCceeeeecCceeecccccCCCCC-CCCeeeEe--ecCC-
Q 010976 381 HSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDFSPDRRAIRIEVPDIVSVSACADLTLP-PGAGLCIE--TIHG- 456 (496)
Q Consensus 381 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~- 456 (496)
...|+++||++....|..+--.+... +.....|+|.. -+..-|++|. --++|++- ..+|
T Consensus 42 LKgfKryWfv~kDt~LsyYKSkEe~~--------------geP~~~inLrG---CEVtPDVnva~~Kf~ikL~ip~~~gm 104 (165)
T 4bbk_A 42 LKACKQYWFVFKDTSIAYFKNKELEQ--------------GEPIEKLNLRG---CEIVPDVNVSGRKFGIKLLIPVADGM 104 (165)
T ss_dssp --CCEEEEEEEETTEEEEESSGGGTT--------------SCCSEEEECTT---CEEEEEEETTTTEEEEEEEEEETTEE
T ss_pred cccceeEEEEEeCCEEEEEcCHHHhc--------------CCCceEEecCc---cEEecccccccceeeEEEecCCCCcc
Confidence 45799999999777776654444421 22233444442 1122244554 23445553 1112
Q ss_pred -ceeeeecChhhhhhHHHHHHHHHHHHhhccc
Q 010976 457 -PVFLVADSWEALDGWLDAIRLVYTIYARGKA 487 (496)
Q Consensus 457 -~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 487 (496)
-+||.+++......|.-|.+|+ .+||.
T Consensus 105 ~e~~LrcdsE~QYa~WMAAcrLA----skGkT 132 (165)
T 4bbk_A 105 NEVYLRCDHEDQYARWMAACILA----SKGKT 132 (165)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHH----HTTCC
T ss_pred eeeeeecCCHHHHHHHHHHhhhc----ccccc
Confidence 2699999999999999999975 56763
No 338
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=67.76 E-value=30 Score=34.89 Aligned_cols=100 Identities=11% Similarity=-0.047 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh----CCC--CHHHHHHHHHHHHHHHHHcCCHHHHHHH
Q 010976 157 DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL----CPT--LHDAFYNWAIAISDRAKMRGRTKEAEEL 230 (496)
Q Consensus 157 ~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l----~P~--~~~a~~~lg~~~~~~~~~~g~~~eA~~~ 230 (496)
.....|+.+|...|+ +.+|...+.....- .+. -.+.+.....++.. .+++..|...
T Consensus 138 rl~~~La~i~e~~g~--------------~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~----~~d~~~a~~~ 199 (445)
T 4b4t_P 138 RVTKDLVEIKKEEGK--------------IDEAADILCELQVETYGSMEMSEKIQFILEQMELSIL----KGDYSQATVL 199 (445)
T ss_dssp HHHHHHHHHHHHHTC--------------HHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHH----HTCHHHHHHH
T ss_pred HHHHHHHHHHHHccC--------------HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH----CCCHHHHHHH
Confidence 445778999999999 99999999887642 111 13455556666666 9999999854
Q ss_pred HHHHHHHHHHHHhcCCCCH----HHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHh
Q 010976 231 WKQATKNYEKAVQLNWNSP----QALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 288 (496)
Q Consensus 231 ~~~A~~~~~~Al~l~P~~~----~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l 288 (496)
+.++...+ .. .+..+ ..+...|.++...++| .+|-.+|..++..
T Consensus 200 ~~ki~~~~---~~-~~~~~~lk~~~~~~~~~~~~~e~~y----------~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 200 SRKILKKT---FK-NPKYESLKLEYYNLLVKISLHKREY----------LEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHH---HH-SSCCHHHHHHHHHHHHHHHHHHCCH----------HHHHHHHHHHHHH
T ss_pred HHHHHHhh---cc-cCCcHHHHHHHHHHHHHHHHHhhhH----------HHHHHHHHHHHhc
Confidence 44432211 12 23332 3556778888888888 9999999988764
No 339
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=64.39 E-value=1.1e+02 Score=31.46 Aligned_cols=66 Identities=8% Similarity=-0.027 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHHHHcCCHHHHH
Q 010976 156 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL-------HDAFYNWAIAISDRAKMRGRTKEAE 228 (496)
Q Consensus 156 ~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~-------~~a~~~lg~~~~~~~~~~g~~~eA~ 228 (496)
+..++.+-..|...+. |++|.++..++. .|.. ...+|.+|.++.- +++|.+|.
T Consensus 231 a~l~nllLRnYL~~~~--------------y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~----q~~Y~eA~ 290 (523)
T 4b4t_S 231 AMLINLILRDFLNNGE--------------VDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAI----QLDYSTAN 290 (523)
T ss_dssp HHHHHHHHHHHHHSSC--------------STTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHH----TTCHHHHH
T ss_pred HHHHHHHHHHHHccCc--------------HHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHH----hccHHHHH
Confidence 4566777788888888 999999999995 4432 4567888999998 99999999
Q ss_pred HHHHHHHHHHHHHHhcCCCC
Q 010976 229 ELWKQATKNYEKAVQLNWNS 248 (496)
Q Consensus 229 ~~~~~A~~~~~~Al~l~P~~ 248 (496)
+++..|+...|.+
T Consensus 291 -------~~L~~A~rkap~~ 303 (523)
T 4b4t_S 291 -------EYIIAAIRKAPHN 303 (523)
T ss_dssp -------HHHHHHTSSCSCS
T ss_pred -------HHHHHHHHhCCcc
Confidence 7777787776643
No 340
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=62.84 E-value=84 Score=34.99 Aligned_cols=87 Identities=14% Similarity=-0.026 Sum_probs=61.4
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-------------HHHHHHh-cCCC--CHHHHHHHHH
Q 010976 194 DEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATK-------------NYEKAVQ-LNWN--SPQALNNWGL 257 (496)
Q Consensus 194 ~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~-------------~~~~Al~-l~P~--~~~a~~~lg~ 257 (496)
...+...|.++..-|-+|.+|.. .|++++|..+|++|-. .....+. ..+. ....|.....
T Consensus 830 ~eL~~~~~~t~~~~yv~gr~~L~----~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~ 905 (950)
T 4gq2_M 830 MQLIGWLNSDPIAVYLKALIYLK----SKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSK 905 (950)
T ss_dssp HHHGGGCCSSHHHHHHHHHHHHH----TTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHH
T ss_pred HHHHhhcCCChHHHHHHHHHHHH----cCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHH
Confidence 44566788998888999999999 9999999988876431 1111111 1112 2346677777
Q ss_pred HHHHccCcchHHHhhhhHHHHHHHHHHHHHh-cCCCHH
Q 010976 258 ALQELSAIVPAREKQTIVRTAISKFRAAIQL-QFDFHR 294 (496)
Q Consensus 258 ~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l-~P~~~~ 294 (496)
++...+-+ +-++...+.||+. .+++..
T Consensus 906 LFE~~~a~----------~~vi~fA~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 906 KLFEESAY----------IDALEFSLLADASKETDDED 933 (950)
T ss_dssp HHHHTTCH----------HHHHHHHHHHHHTCCSCCHH
T ss_pred HHHhcCCH----------HHHHHHHHHHHhhcccCCcc
Confidence 88888887 9999999999975 455554
No 341
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=61.14 E-value=1.2e+02 Score=29.20 Aligned_cols=127 Identities=12% Similarity=-0.075 Sum_probs=0.0
Q ss_pred hhhcH---HHHHHHHHHhhccchhhhHhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhH
Q 010976 110 LAEQN---NAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALL 186 (496)
Q Consensus 110 ~~~~~---~~A~~~~~~~l~~~~~~~~~~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 186 (496)
..|++ =+|...+....... .++++|++|++.+-.. +..+.+.|+ +
T Consensus 24 ~~G~y~~~YEAHQ~~RTi~~Ry----~~~k~y~eAidLL~~G--------------A~~ll~~~Q--------------~ 71 (336)
T 3lpz_A 24 AEGQPEEQYEAAQETRLVAARY----SKQGNWAAAVDILASV--------------SQTLLRSGQ--------------G 71 (336)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHH----HHTTCHHHHHHHHHHH--------------HHHHHHTTC--------------H
T ss_pred hCCCCccccHHHHHHHHHHHHH----HhhcCHHHHHHHHHHH--------------HHHHHHCCC--------------c
Q ss_pred HHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 010976 187 EEACKKYDEATRL-----CPTLHDAFYNWAIAISDRAKMRGRTKEAEELW-KQATKNYEKAVQLNWNSPQALNNWGLALQ 260 (496)
Q Consensus 187 ~~A~~~~~~Al~l-----~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~-~~A~~~~~~Al~l~P~~~~a~~~lg~~l~ 260 (496)
.-|.....-.++. -|-+.....++..++.. ...-+-....| ++|+..-.+.=...-.++..+..+|..|+
T Consensus 72 ~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~----~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~ 147 (336)
T 3lpz_A 72 GSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRL----FQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYV 147 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTT----SCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHh----CCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHH
Q ss_pred HccCcchHHHhhhhHHHHHHHH
Q 010976 261 ELSAIVPAREKQTIVRTAISKF 282 (496)
Q Consensus 261 ~~g~~~~A~~~~~~~~~Ai~~~ 282 (496)
+.+++ .+|..+|
T Consensus 148 ~e~~~----------~~Ae~H~ 159 (336)
T 3lpz_A 148 EEGEF----------EAAEKHL 159 (336)
T ss_dssp HTTCH----------HHHHHHH
T ss_pred ccCCH----------HHHHHHH
No 342
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=59.72 E-value=6.7 Score=30.02 Aligned_cols=47 Identities=19% Similarity=0.251 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 010976 185 LLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN 247 (496)
Q Consensus 185 ~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~ 247 (496)
.+++|..+..++|.++-.+ . .|+-++|+++|++.+..+.+.|.+.-.
T Consensus 12 ~h~~AF~~Is~aL~~DE~~------------~----~G~k~~A~~~YkkGi~eL~~Gi~V~~~ 58 (89)
T 3eab_A 12 FHKQAFEYISIALRIDEDE------------K----AGQKEQAVEWYKKGIEELEKGIAVIVT 58 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHS------------C----SSSGGGSHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHhhhcc------------c----CCCHHHHHHHHHHHHHHHHhhcCCccC
Confidence 3777777777777654210 0 299999999999999999999997643
No 343
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=59.37 E-value=11 Score=28.52 Aligned_cols=35 Identities=20% Similarity=0.136 Sum_probs=24.2
Q ss_pred hcHHHHHHHHHHhhccchhhhHhhccHHHHHHHHHHHHHh
Q 010976 112 EQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIER 151 (496)
Q Consensus 112 ~~~~~A~~~~~~~l~~~~~~~~~~g~~~~Ai~~~~~al~~ 151 (496)
.-.+.|+.++.+++..+ +.|++++|+.+|.++++.
T Consensus 14 ~~~~~Ai~lv~~Ave~D-----~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 14 MLEEMARKYAINAVKAD-----KEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-----HhccHHHHHHHHHHHHHH
Confidence 34567888888887666 356777777777777653
No 344
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=58.10 E-value=11 Score=28.30 Aligned_cols=33 Identities=21% Similarity=0.174 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhhccchhhhHhhccHHHHHHHHHHHHHh
Q 010976 114 NNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIER 151 (496)
Q Consensus 114 ~~~A~~~~~~~l~~~~~~~~~~g~~~~Ai~~~~~al~~ 151 (496)
.+.|+.++.+++..+ +.|+|++|+.+|.++++.
T Consensus 8 ~~~Ai~lv~~Ave~D-----~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 8 EDMARKYAILAVKAD-----KEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-----HhccHHHHHHHHHHHHHH
Confidence 457888888887666 356777777777777653
No 345
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=57.79 E-value=1.9e+02 Score=30.39 Aligned_cols=104 Identities=12% Similarity=-0.087 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHhCCCCHHHH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccC
Q 010976 186 LEEACKKYDEATRLCPTLHDAF-YNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSA 264 (496)
Q Consensus 186 ~~~A~~~~~~Al~l~P~~~~a~-~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~ 264 (496)
.+.|...+.+......-+.... ...+.+-.. ....+...++. ..+.+......++.......+.+ ...|+
T Consensus 230 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~-~~~~~~~~~~~-------~~~~~~~~~~~~~~~~e~~~r~A-lr~~d 300 (618)
T 1qsa_A 230 AENARLMIPSLAQAQQLNEDQIQELRDIVAWR-LMGNDVTDEQA-------KWRDDAIMRSQSTSLIERRVRMA-LGTGD 300 (618)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHT-SCSTTCCHHHH-------HHHHHHHHTCCCHHHHHHHHHHH-HHHTC
T ss_pred HHHHHHHHHhhhhccCCCHHHHHHHHHHHHHH-HHHcCCChHHH-------HHHHhccccCCChHHHHHHHHHH-HHCCC
Confidence 7778877777654333222222 111111111 00133233444 45555544333333333334444 35578
Q ss_pred cchHHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcch
Q 010976 265 IVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAE 308 (496)
Q Consensus 265 ~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a~~~lg~~~~~~g~ 308 (496)
+ +.|..+|++.-.-........|-+|.++..+|+
T Consensus 301 ~----------~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~ 334 (618)
T 1qsa_A 301 R----------RGLNTWLARLPMEAKEKDEWRYWQADLLLERGR 334 (618)
T ss_dssp H----------HHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTC
T ss_pred H----------HHHHHHHHHccccccccHhHHHHHHHHHHHcCC
Confidence 7 888888876554444567788888888888887
No 346
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=56.70 E-value=1.3e+02 Score=31.74 Aligned_cols=120 Identities=11% Similarity=-0.077 Sum_probs=72.1
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHH-HHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010976 135 QRILTFAAKRYANAIERNPEDYDA-LYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIA 213 (496)
Q Consensus 135 ~g~~~~Ai~~~~~al~~~P~~~~a-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~ 213 (496)
..+.+.|...+........-+... +.....+-...-. .+...++...+.+......++.......+.+
T Consensus 227 r~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~A 295 (618)
T 1qsa_A 227 RQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMG-----------NDVTDEQAKWRDDAIMRSQSTSLIERRVRMA 295 (618)
T ss_dssp HHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCS-----------TTCCHHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHH-----------cCCChHHHHHHHhccccCCChHHHHHHHHHH
Confidence 356677888877765443333322 2222222222221 0103456666777665444433333333443
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHH
Q 010976 214 ISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQ 287 (496)
Q Consensus 214 ~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~ 287 (496)
.. .|++..|. ..+.+.-.-........+-+|.++..+|+. ++|...|+++..
T Consensus 296 -lr----~~d~~~a~-------~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~----------~~a~~~~~~~a~ 347 (618)
T 1qsa_A 296 -LG----TGDRRGLN-------TWLARLPMEAKEKDEWRYWQADLLLERGRE----------AEAKEILHQLMQ 347 (618)
T ss_dssp -HH----HTCHHHHH-------HHHHHSCTTGGGSHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHT
T ss_pred -HH----CCCHHHHH-------HHHHHccccccccHhHHHHHHHHHHHcCCH----------HHHHHHHHHHhc
Confidence 35 78999988 566554333335688899999999999999 999999999975
No 347
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=48.05 E-value=49 Score=32.23 Aligned_cols=45 Identities=16% Similarity=0.058 Sum_probs=32.2
Q ss_pred HHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 010976 189 ACKKYDEATRL-----CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKN 237 (496)
Q Consensus 189 A~~~~~~Al~l-----~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~ 237 (496)
++..|.+|+.. +-.+...|..+|-.+++ .+++.+|+..|.+|-..
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR----~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYR----KKKYYEAIASWVDAGYV 325 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhh----cchHHHHHHHHHHHHHH
Confidence 45555555554 34456677888888888 99999999877666543
No 348
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=46.36 E-value=4.2 Score=37.81 Aligned_cols=45 Identities=11% Similarity=0.045 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010976 185 LLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNS 248 (496)
Q Consensus 185 ~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~ 248 (496)
....|+....+|++.+- .|+|.+|+.+|.+|++.+..+++..|+.
T Consensus 19 ~~~~Ai~lv~~AVe~D~-------------------~g~y~eAl~lY~eaIe~Ll~alk~e~d~ 63 (257)
T 2ymb_A 19 QSTAAATVLKRAVELDS-------------------ESRYPQALVCYQEGIDLLLQVLKGTKDN 63 (257)
T ss_dssp ----------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHH-------------------cCCHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 46778888888887653 8999999999999999999999877653
No 349
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=44.82 E-value=91 Score=26.13 Aligned_cols=78 Identities=17% Similarity=0.039 Sum_probs=54.0
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHH-HHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010976 135 QRILTFAAKRYANAIERNPEDYDALYNWAL-VLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIA 213 (496)
Q Consensus 135 ~g~~~~Ai~~~~~al~~~P~~~~a~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~ 213 (496)
.|++..-+.+|.+. +-.+ -+.++|. ++..+|+ -++-.+.+...+.-++-++..++.+|.+
T Consensus 74 C~NlKrVi~C~~~~---n~~s--e~vd~ALd~lv~~~K--------------kDqLdki~~~~l~n~~~~~~~l~kia~A 134 (172)
T 1wy6_A 74 CQNLKSVVECGVIN---NTLN--EHVNKALDILVIQGK--------------RDKLEEIGREILKNNEVSASILVAIANA 134 (172)
T ss_dssp CSCTHHHHHHHHHT---TCCC--HHHHHHHHHHHHTTC--------------HHHHHHHHHHHC--CCSCHHHHHHHHHH
T ss_pred hhcHHHHHHHHHHh---cchH--HHHHHHHHHHHHhcc--------------HhHHHHHHHHHhccCCCChHHHHHHHHH
Confidence 46777777777654 2222 2445554 4456666 7777777777777677789999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHH
Q 010976 214 ISDRAKMRGRTKEAEELWKQAT 235 (496)
Q Consensus 214 ~~~~~~~~g~~~eA~~~~~~A~ 235 (496)
|.. .|+..+|.+.+.+|.
T Consensus 135 y~K----lg~~r~a~eLl~~AC 152 (172)
T 1wy6_A 135 LRR----VGDERDATTLLIEAC 152 (172)
T ss_dssp HHH----TTCHHHHHHHHHHHH
T ss_pred HHH----hcchhhHHHHHHHHH
Confidence 999 999999996555544
No 350
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=44.48 E-value=23 Score=28.57 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=22.3
Q ss_pred cHHHHHHHHHHhhccchhhhHhhccHHHHHHHHHHHHH
Q 010976 113 QNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIE 150 (496)
Q Consensus 113 ~~~~A~~~~~~~l~~~~~~~~~~g~~~~Ai~~~~~al~ 150 (496)
-.+.|+.++.+++..+ ..|+|++|+.+|..+++
T Consensus 14 ~l~kAi~lv~~Ave~D-----~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 14 NLQKAIDLASKAAQED-----KAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHHHHHHH-----HHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-----HccCHHHHHHHHHHHHH
Confidence 3567888888887655 24666777766666655
No 351
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=43.03 E-value=27 Score=26.18 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=23.4
Q ss_pred cHHHHHHHHHHhhccchhhhHhhccHHHHHHHHHHHHHh
Q 010976 113 QNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIER 151 (496)
Q Consensus 113 ~~~~A~~~~~~~l~~~~~~~~~~g~~~~Ai~~~~~al~~ 151 (496)
-.+.|+.++.+++..+ ..|+|++|+.+|..+++.
T Consensus 9 ~l~~A~~l~~~Av~~D-----~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 9 FLTKGIELVQKAIDLD-----TATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-----HcCCHHHHHHHHHHHHHH
Confidence 3557778888887555 347777777777777653
No 352
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=42.52 E-value=28 Score=26.37 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=22.5
Q ss_pred cHHHHHHHHHHhhccchhhhHhhccHHHHHHHHHHHHHh
Q 010976 113 QNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIER 151 (496)
Q Consensus 113 ~~~~A~~~~~~~l~~~~~~~~~~g~~~~Ai~~~~~al~~ 151 (496)
+...|+.++.+++..+ ..|+|++|+.+|..+++.
T Consensus 12 ~~~~A~~lv~~Ave~D-----~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 12 QSTAAATVLKRAVELD-----SESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-----HcCCHHHHHHHHHHHHHH
Confidence 4456777777777665 346667777777776653
No 353
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=40.87 E-value=69 Score=31.80 Aligned_cols=45 Identities=11% Similarity=0.074 Sum_probs=32.0
Q ss_pred HHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 010976 189 ACKKYDEATRL-----CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKN 237 (496)
Q Consensus 189 A~~~~~~Al~l-----~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~ 237 (496)
++..|.+|+.. +-.+...|..+|-.|++ .+++.+|+..|..|-..
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR----~~~~reAl~~WA~Aa~V 347 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR----NRNVREALQAWADTATV 347 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhh----cchHHHHHHHHHHHHHH
Confidence 45566666554 34456677788888888 99999999777665543
No 354
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=38.05 E-value=78 Score=23.10 Aligned_cols=34 Identities=15% Similarity=0.234 Sum_probs=29.1
Q ss_pred HHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHHH
Q 010976 160 YNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDAF 207 (496)
Q Consensus 160 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a~ 207 (496)
..+|..+...|+ +++|+.+|-+|+..+|+-.+.+
T Consensus 21 V~~GE~L~~~g~--------------~~~~~~hf~nAl~Vc~qP~~LL 54 (73)
T 3ax2_A 21 IQLGEELLAQGD--------------YEKGVDHLTNAIAVCGQPQQLL 54 (73)
T ss_dssp HHHHHHHHHTTC--------------HHHHHHHHHHHHHTCSSCHHHH
T ss_pred HHHHHHHHHCCC--------------HHHHHHHHHHHHHHcCCHHHHH
Confidence 467889999999 9999999999999998866543
No 355
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=37.52 E-value=84 Score=31.19 Aligned_cols=45 Identities=11% Similarity=0.074 Sum_probs=31.8
Q ss_pred HHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 010976 189 ACKKYDEATRL-----CPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKN 237 (496)
Q Consensus 189 A~~~~~~Al~l-----~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~ 237 (496)
++..|++|+.. +-.+...|..+|-.+++ .+++.+|+..|..|-..
T Consensus 283 ~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R----~~~~~eAl~~wa~aa~V 332 (489)
T 4gq4_A 283 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR----NRNVREALQAWADTATV 332 (489)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCcccceeecchHHHH----hhhHHHHHHHhhhhhhh
Confidence 34555555553 44566677888888888 99999999777666443
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=37.46 E-value=1.2e+02 Score=33.74 Aligned_cols=38 Identities=21% Similarity=0.191 Sum_probs=33.1
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHH
Q 010976 146 ANAIERNPEDYDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEAT 197 (496)
Q Consensus 146 ~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al 197 (496)
.+.+...|.++-.-|.+|.+|...|+ +++|..+|++|-
T Consensus 830 ~eL~~~~~~t~~~~yv~gr~~L~~ge--------------~~~A~~~F~kAA 867 (950)
T 4gq2_M 830 MQLIGWLNSDPIAVYLKALIYLKSKE--------------AVKAVRCFKTTS 867 (950)
T ss_dssp HHHGGGCCSSHHHHHHHHHHHHHTTC--------------HHHHHHHHHTCC
T ss_pred HHHHhhcCCChHHHHHHHHHHHHcCC--------------HHHHHHHHHHHh
Confidence 34566778898888999999999999 999999999875
No 357
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=37.23 E-value=3.3e+02 Score=31.43 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=27.0
Q ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 010976 137 ILTFAAKRYANAIERNPEDYDALYNWALVLQES 169 (496)
Q Consensus 137 ~~~~Ai~~~~~al~~~P~~~~a~~~lg~~~~~~ 169 (496)
+.+++.+.|++.++.+|++..++..+-..+...
T Consensus 1122 ~~~~~~~~~~~l~~~~P~~l~~~~~~l~~l~~~ 1154 (1354)
T 3lxu_X 1122 ELEMAEKIYNDVVAAHPKHLQANLLLIQNIESN 1154 (1354)
T ss_dssp CHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHCCccHHHHHHHHHhhhhh
Confidence 357788999999999999999888777665543
No 358
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=36.90 E-value=31 Score=30.00 Aligned_cols=35 Identities=31% Similarity=0.327 Sum_probs=30.9
Q ss_pred CCCCCCeeeEeecCCce--eeeecChhhhhhHHHHHH
Q 010976 442 TLPPGAGLCIETIHGPV--FLVADSWEALDGWLDAIR 476 (496)
Q Consensus 442 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~ 476 (496)
+-|++..|.|...+|.. +|++.|..++.+|..||.
T Consensus 137 tD~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~ 173 (178)
T 2adz_A 137 TDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQ 173 (178)
T ss_dssp SCCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHH
Confidence 44589999999888864 999999999999999995
No 359
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=35.13 E-value=2e+02 Score=24.10 Aligned_cols=123 Identities=14% Similarity=0.019 Sum_probs=71.5
Q ss_pred hccHHHHHHHHHHHHHhCCCCHHHHH-----------HHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC
Q 010976 135 QRILTFAAKRYANAIERNPEDYDALY-----------NWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL 203 (496)
Q Consensus 135 ~g~~~~Ai~~~~~al~~~P~~~~a~~-----------~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~ 203 (496)
.|..++.++...+.+.-.+-.-.-|+ .+-.++-..|..++ ...=+++..-+.+|-+. +-.+
T Consensus 20 dG~v~qGveii~k~~~ssni~E~NW~ICNiiD~a~C~y~v~vLd~IGkiFD-----is~C~NlKrVi~C~~~~---n~~s 91 (172)
T 1wy6_A 20 DGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCRYMFQVLDKIGSYFD-----LDKCQNLKSVVECGVIN---NTLN 91 (172)
T ss_dssp TTCHHHHHHHHHHHHHHSCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSC-----GGGCSCTHHHHHHHHHT---TCCC
T ss_pred hhhHHHHHHHHHHHcCCCCccccceeeeecchhhchhHHHHHHHHHhhhcC-----cHhhhcHHHHHHHHHHh---cchH
Confidence 47777788888887776654322222 11222333333111 11112255555555443 2121
Q ss_pred HHHHHHHHHH-HHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHH
Q 010976 204 HDAFYNWAIA-ISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKF 282 (496)
Q Consensus 204 ~~a~~~lg~~-~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~ 282 (496)
-|..++.- +.. +|+-++-. +.+...+.-++-+++.+..+|.+|.+.|+. .+|-+.+
T Consensus 92 --e~vd~ALd~lv~----~~KkDqLd-------ki~~~~l~n~~~~~~~l~kia~Ay~Klg~~----------r~a~eLl 148 (172)
T 1wy6_A 92 --EHVNKALDILVI----QGKRDKLE-------EIGREILKNNEVSASILVAIANALRRVGDE----------RDATTLL 148 (172)
T ss_dssp --HHHHHHHHHHHH----TTCHHHHH-------HHHHHHC--CCSCHHHHHHHHHHHHHTTCH----------HHHHHHH
T ss_pred --HHHHHHHHHHHH----hccHhHHH-------HHHHHHhccCCCChHHHHHHHHHHHHhcch----------hhHHHHH
Confidence 23444433 334 67766655 666666666777899999999999999999 9999999
Q ss_pred HHHHHh
Q 010976 283 RAAIQL 288 (496)
Q Consensus 283 ~~Al~l 288 (496)
.+|-+-
T Consensus 149 ~~AC~k 154 (172)
T 1wy6_A 149 IEACKK 154 (172)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 988764
No 360
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=34.80 E-value=63 Score=29.06 Aligned_cols=52 Identities=21% Similarity=0.216 Sum_probs=35.9
Q ss_pred ceeeeecCceeecccccCCCCCCCCeeeEeecCCceeeeecChhhhhhHHHHHH
Q 010976 423 RAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIR 476 (496)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 476 (496)
..-.+++.+|.++.+....+ ....|.+-|..--.+|.++|.++.++|+.||.
T Consensus 174 ~~g~~~~~~i~s~~~~~~~~--~~~~f~iit~~r~~~~~a~s~~e~~~Wi~~lq 225 (228)
T 3tfm_A 174 AVGTLDVGLIDSVCASDSPD--RPNSFVIITANRVLHCNADTPEEMHHWITLLQ 225 (228)
T ss_dssp CSEEEEGGGEEEEEECCCSS--CTTEEEEEETTEEEEEECSSHHHHHHHHHHHC
T ss_pred ccccCChhheeccccCCCCC--CCCcEEEEeCCceEEEEcCCHHHHHHHHHHHh
Confidence 34567777777776554433 44466666544434799999999999999984
No 361
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=33.52 E-value=2.4e+02 Score=28.38 Aligned_cols=99 Identities=7% Similarity=-0.089 Sum_probs=64.7
Q ss_pred hhhHHHHHHHHHHHHHhCCC------------CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH--HHhcCCC-
Q 010976 183 DALLEEACKKYDEATRLCPT------------LHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEK--AVQLNWN- 247 (496)
Q Consensus 183 ~~~~~~A~~~~~~Al~l~P~------------~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~--Al~l~P~- 247 (496)
...++++...+.++..++-+ .-...+.++..+.+.|+.+++..-+...+ ++++.-.- -+...|.
T Consensus 139 ~~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~-k~i~~~~~~p~~~~~p~~ 217 (455)
T 3t5v_B 139 HQFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIF-KNFQPKSMLAHFNEYQLD 217 (455)
T ss_dssp THHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHH-HTHHHHCCCSCGGGSCHH
T ss_pred hhHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHH-HHhccCCCCcChhhCCcc
Confidence 45689999999999988332 13344555555555566699988887322 11111000 0111122
Q ss_pred -CHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHh-cCCC
Q 010976 248 -SPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL-QFDF 292 (496)
Q Consensus 248 -~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l-~P~~ 292 (496)
-...++.+|..+...++| .+|..++..|++. -|..
T Consensus 218 q~v~Y~YYlGr~~~~~~~y----------~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 218 QQIEYRYLLGRYYLLNSQV----------HNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHCC
T ss_pred ceEeeeHHHHHHHHHHccH----------HHHHHHHHHHHHhcCCcc
Confidence 245688999999999999 9999999999998 7754
No 362
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=32.59 E-value=3.3e+02 Score=25.78 Aligned_cols=108 Identities=10% Similarity=-0.050 Sum_probs=61.5
Q ss_pred hhhcHHHHHHHHHHhhccchhhhHhhccHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHhcCCCCCCCCCcchhh
Q 010976 110 LAEQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIER-----NPEDYDALYNWALVLQESADNVSLDSTSPSKDA 184 (496)
Q Consensus 110 ~~~~~~~A~~~~~~~l~~~~~~~~~~g~~~~Ai~~~~~al~~-----~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~ 184 (496)
..+++++|++++....... .+.|++..|.++..-.++. .|-+.+....+..++..... ....+..
T Consensus 45 ~~~~~~eAidlL~~ga~~l----l~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~------~~~~r~~ 114 (312)
T 2wpv_A 45 RSKSYEHAIELISQGALSF----LKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDP------SEPNLKD 114 (312)
T ss_dssp HTTCHHHHHHHHHHHHHHH----HHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCT------TCTTHHH
T ss_pred HhcCHHHHHHHHHHHHHHH----HHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCC------CCchHHH
Confidence 4466777777665544322 2345556655543333322 23344445555555443322 1223334
Q ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 010976 185 LLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELW 231 (496)
Q Consensus 185 ~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~ 231 (496)
...+|++.-.+.=...-.++..+..+|..|.. .|++.+|..+|
T Consensus 115 fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~----e~~~~~A~~H~ 157 (312)
T 2wpv_A 115 VITGMNNWSIKFSEYKFGDPYLHNTIGSKLLE----GDFVYEAERYF 157 (312)
T ss_dssp HHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHH----TTCHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhh----cCCHHHHHHHH
Confidence 45555555444422233589999999999999 99999999776
No 363
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=32.09 E-value=92 Score=27.51 Aligned_cols=36 Identities=14% Similarity=0.034 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHHH
Q 010976 157 DALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHDA 206 (496)
Q Consensus 157 ~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~a 206 (496)
.-+|.+|.++...++ |.+|.+++..|+..+|.....
T Consensus 15 ~Y~YYlGr~~~~~~~--------------y~~A~~~L~~A~~~~~~~~~~ 50 (203)
T 3t5x_A 15 TYKYYVGRKAMFDSD--------------FKQAEEYLSFAFEHCHRSSQK 50 (203)
T ss_dssp HHHHHHHHHHHHTTC--------------HHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHHHHHHHHhC--------------HHHHHHHHHHHHHHCCHhHHH
Confidence 457889999999999 999999999999999976543
No 364
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=31.31 E-value=1.2e+02 Score=28.10 Aligned_cols=33 Identities=27% Similarity=0.273 Sum_probs=29.2
Q ss_pred CCCeeeEeecCCce--eeeecChhhhhhHHHHHHH
Q 010976 445 PGAGLCIETIHGPV--FLVADSWEALDGWLDAIRL 477 (496)
Q Consensus 445 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~ 477 (496)
+.++|.+...+|.. +|+++|..++.+|..||.-
T Consensus 225 ~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~ 259 (263)
T 1z87_A 225 EPRYLEICAADGQDAVFLRAKDEASARSWAGAIQA 259 (263)
T ss_dssp SSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHH
Confidence 88999999887864 9999999999999999963
No 365
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=30.83 E-value=1e+02 Score=22.42 Aligned_cols=33 Identities=12% Similarity=0.072 Sum_probs=28.1
Q ss_pred HHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCHHH
Q 010976 253 NNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRA 295 (496)
Q Consensus 253 ~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~~a 295 (496)
..+|..+...|++ ++|+.+|-+|+...|+-...
T Consensus 21 V~~GE~L~~~g~~----------~~~~~hf~nAl~Vc~qP~~L 53 (73)
T 3ax2_A 21 IQLGEELLAQGDY----------EKGVDHLTNAIAVCGQPQQL 53 (73)
T ss_dssp HHHHHHHHHTTCH----------HHHHHHHHHHHHTCSSCHHH
T ss_pred HHHHHHHHHCCCH----------HHHHHHHHHHHHHcCCHHHH
Confidence 5678889999998 99999999999998875543
No 366
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=30.65 E-value=1.4e+02 Score=22.67 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=23.1
Q ss_pred hhcHHHHHHHHHHhhccchhhhHhhccHHHHHHHHHHHHH
Q 010976 111 AEQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIE 150 (496)
Q Consensus 111 ~~~~~~A~~~~~~~l~~~~~~~~~~g~~~~Ai~~~~~al~ 150 (496)
..-.+.|+.++.+++..+. .|+|++|+.+|..+++
T Consensus 9 ~~~l~~Ai~lv~~Ave~D~-----~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 9 DSDSTAAVAVLKRAVELDA-----ESRYQQALVCYQEGID 43 (93)
T ss_dssp CCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHH
Confidence 4456688888888887763 3556666666665554
No 367
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=30.41 E-value=73 Score=25.24 Aligned_cols=52 Identities=12% Similarity=0.134 Sum_probs=36.8
Q ss_pred eeecCceeecccccCCCCCCCCeeeEeecCCceeeeecChhhhhhHHHHHHHHH
Q 010976 426 RIEVPDIVSVSACADLTLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLVY 479 (496)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 479 (496)
.+|+.++. |.-+.|.. +-..+|.|.+......+-|++.++-..|.++|+-+.
T Consensus 55 ~~~L~~~~-v~d~~d~~-~~~n~f~i~~~~~s~~~~aes~~eK~~Wl~~~~~a~ 106 (113)
T 1zc3_B 55 LYPLDRLA-VVNVKDNP-PMKDMFKLLMFPESRIFQAENAKIKREWLEVLEETK 106 (113)
T ss_dssp EEETTTCE-EEEECCBT-TBSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEcccCE-EEECCCCc-ccceEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHH
Confidence 35777633 33333422 457788888766666788999999999999999763
No 368
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=30.09 E-value=2.6e+02 Score=26.99 Aligned_cols=114 Identities=13% Similarity=0.135 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHHHH
Q 010976 156 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRL----------------CPTLHDAFYNWAIAISDRAK 219 (496)
Q Consensus 156 ~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l----------------~P~~~~a~~~lg~~~~~~~~ 219 (496)
..+++|+|.+|.+.+. ...-......+.|+.+|++|-.+ +|....++..+..+..+
T Consensus 117 a~VLfNiaal~s~~a~-----~~~r~~~~glK~A~~~fq~AAG~f~~l~~~~~~~~~~Dls~~~l~~L~~l~LAQAQ--- 188 (363)
T 3rau_A 117 ACILYNLGALHSMLGA-----MDKRVSEEGMKVSCTHFQCAAGAFAYLREHFPQAYSVDMSRQILTLNVNLMLGQAQ--- 188 (363)
T ss_dssp HHHHHHHHHHHHHHHH-----HSCCCSHHHHHHHHHHHHHHHHHHHHHHHHCCSCSSGGGSHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHH-----HhccCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHH---
Q ss_pred HcCCHHHHH----------HHHHHHHHHHHHHHhcCCCCHH-------------------------HHHHHHHHHHHccC
Q 010976 220 MRGRTKEAE----------ELWKQATKNYEKAVQLNWNSPQ-------------------------ALNNWGLALQELSA 264 (496)
Q Consensus 220 ~~g~~~eA~----------~~~~~A~~~~~~Al~l~P~~~~-------------------------a~~~lg~~l~~~g~ 264 (496)
.=-+.+|+ +.-.++...|.+|...--.... +++..|......++
T Consensus 189 -E~~~~Kai~~~~k~~liAkLa~q~~~~Y~~a~~~l~~~~~~~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k 267 (363)
T 3rau_A 189 -ECLLEKSMLDNRKSFLVARISAQVVDYYKEACRALENPDTASLLGRIQKDWKKLVQMKIYYFAAVAHLHMGKQAEEQQK 267 (363)
T ss_dssp -HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred -HHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHhcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhh
Q ss_pred cchHHHhhhhHHHHHHHHHHHHHh
Q 010976 265 IVPAREKQTIVRTAISKFRAAIQL 288 (496)
Q Consensus 265 ~~~A~~~~~~~~~Ai~~~~~Al~l 288 (496)
+ .+|+..++.|...
T Consensus 268 ~----------GeaIa~L~~A~~~ 281 (363)
T 3rau_A 268 F----------GERVAYFQSALDK 281 (363)
T ss_dssp H----------HHHHHHHHHHHHH
T ss_pred H----------HHHHHHHHHHHHH
No 369
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=29.63 E-value=83 Score=24.11 Aligned_cols=29 Identities=24% Similarity=0.040 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHH
Q 010976 156 YDALYNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATR 198 (496)
Q Consensus 156 ~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~ 198 (496)
+..+..++..+...|+ |++||++.++|..
T Consensus 15 AH~~~RrAe~ll~~gk--------------ydeAIech~kAa~ 43 (97)
T 2crb_A 15 AHQQSRRADRLLAAGK--------------YEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHHTTC--------------HHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCC--------------HHHHHHHHHHHHH
Confidence 3445567788888888 9999998888764
No 370
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=29.29 E-value=2.6e+02 Score=23.66 Aligned_cols=64 Identities=9% Similarity=0.041 Sum_probs=42.8
Q ss_pred HHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCC--H----HHHHH-HHHHHHHHHHHcCCHHHHHHHHH
Q 010976 160 YNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTL--H----DAFYN-WAIAISDRAKMRGRTKEAEELWK 232 (496)
Q Consensus 160 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~--~----~a~~~-lg~~~~~~~~~~g~~~eA~~~~~ 232 (496)
+..|..++..|+ |-+|-+.++.+..-.+.. . ..+.+ ++.++.. ...|+..-|..++.
T Consensus 36 ~~~~i~lFn~g~--------------yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H--~~rgN~~GA~~ll~ 99 (161)
T 2ijq_A 36 VVHGVRLYNSGE--------------FHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKH--FDFEDDDGMRSLFR 99 (161)
T ss_dssp HHHHHHHHHTTC--------------HHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHH--HHHCCHHHHHHHHH
T ss_pred HHHHHHHHhCCC--------------chHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH--HHhCCHHHHHHHHH
Confidence 445777888899 999999999999887654 2 23333 3333322 23799999996666
Q ss_pred HHHHHHH
Q 010976 233 QATKNYE 239 (496)
Q Consensus 233 ~A~~~~~ 239 (496)
+|+..+.
T Consensus 100 ~Al~~L~ 106 (161)
T 2ijq_A 100 TSLQYFR 106 (161)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 6655554
No 371
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=28.15 E-value=12 Score=37.71 Aligned_cols=45 Identities=20% Similarity=0.257 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCCH
Q 010976 186 LEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSP 249 (496)
Q Consensus 186 ~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~~ 249 (496)
+++|+++.++|++.+ . .|+|++|+.+|.+|+++|.++++..+.+.
T Consensus 8 ~~~A~~~~~~Av~~D---------------~----~g~~~eA~~~Y~~a~~~l~~~~k~e~~~~ 52 (444)
T 2zan_A 8 LQKAIDLASKAAQED---------------K----AGNYEEALQLYQHAVQYFLHVVKYEAQGD 52 (444)
T ss_dssp ----------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHH---------------H----cCCHHHHHHHHHHHHHHHHHHHHhhccCh
Confidence 677888888887654 2 89999999999999999999997764333
No 372
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.41 E-value=76 Score=25.43 Aligned_cols=37 Identities=22% Similarity=0.164 Sum_probs=26.2
Q ss_pred hhhhcHHHHHHHHHHhhccchhhhHhhccHHHHHHHHHHHHH
Q 010976 109 QLAEQNNAAMELINSVTGVDEEGRSRQRILTFAAKRYANAIE 150 (496)
Q Consensus 109 ~~~~~~~~A~~~~~~~l~~~~~~~~~~g~~~~Ai~~~~~al~ 150 (496)
.....++.|+.+++++|..+.. |+-+.|+.+|++.|.
T Consensus 14 ~ik~~h~~AF~~Is~AL~~DE~-----g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 14 IIREAYKKAFLFVNKGLNTDEL-----GQKEEAKNYYKQGIG 50 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhhc-----CCHHHHHHHHHHHHH
Confidence 3567788999999999998853 555566666555543
No 373
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=26.92 E-value=4.7e+02 Score=25.83 Aligned_cols=101 Identities=11% Similarity=-0.029 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHH
Q 010976 204 HDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWN--SPQALNNWGLALQELSAIVPAREKQTIVRTAISK 281 (496)
Q Consensus 204 ~~a~~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~--~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~ 281 (496)
+.....|+.+|.. .|++.+|...++.-. ..+...++. -.+.+.....++...+++ ..|...
T Consensus 137 arl~~~La~i~e~----~g~~~eA~~iL~~l~---~Et~~~~~~~~kve~~l~q~rl~l~~~d~----------~~a~~~ 199 (445)
T 4b4t_P 137 ARVTKDLVEIKKE----EGKIDEAADILCELQ---VETYGSMEMSEKIQFILEQMELSILKGDY----------SQATVL 199 (445)
T ss_dssp HHHHHHHHHHHHH----HTCHHHHHHHHHHHH---HHHCSSSCHHHHHHHHHHHHHHHHHHTCH----------HHHHHH
T ss_pred HHHHHHHHHHHHH----ccCHHHHHHHHHHHH---HHHHhcccHHHHHHHHHHHHHHHHHCCCH----------HHHHHH
Confidence 3455778888888 999999994433211 111111211 245677778888889998 999999
Q ss_pred HHHHHH---hcCCCH----HHHHHHHHHHHHcchhHHhccCCCCCCCCCcHHHHHHHHHHHHHHHh
Q 010976 282 FRAAIQ---LQFDFH----RAIYNLGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHA 340 (496)
Q Consensus 282 ~~~Al~---l~P~~~----~a~~~lg~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 340 (496)
++++.. -.+..+ ..+...|.++...++ |..|..+|..+..
T Consensus 200 ~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~-------------------y~~a~~~y~e~~~ 246 (445)
T 4b4t_P 200 SRKILKKTFKNPKYESLKLEYYNLLVKISLHKRE-------------------YLEVAQYLQEIYQ 246 (445)
T ss_dssp HHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCC-------------------HHHHHHHHHHHHH
T ss_pred HHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhh-------------------HHHHHHHHHHHHh
Confidence 988742 233333 344556667777676 6666666666654
No 374
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=25.51 E-value=4.2e+02 Score=25.60 Aligned_cols=105 Identities=20% Similarity=0.110 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhc------------CCCCCCCCCcchhhhHHHHHHHHHHHHHh----------------------CC
Q 010976 156 YDALYNWALVLQESA------------DNVSLDSTSPSKDALLEEACKKYDEATRL----------------------CP 201 (496)
Q Consensus 156 ~~a~~~lg~~~~~~~------------~~~~~~~~~~~~~~~~~~A~~~~~~Al~l----------------------~P 201 (496)
..+++|+|.+|.+.+ . ...|+.+|++|-.+ +|
T Consensus 114 a~VLfNiaal~sq~A~~~~~~~r~~~e~--------------lK~A~~~fq~AAG~f~~l~~~~~~~~~~~~~~~~Dls~ 179 (376)
T 3r9m_A 114 ISMGFNVALWYTKYASRLAGKENITEDE--------------AKEVHRSLKIAAGIFKHLKESHLPKLITPAEKGRDLES 179 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTCCHHH--------------HHHHHHHHHHHHHHHHHHHHHTGGGCSSCCCTTSTTSH
T ss_pred HHHHHHHHHHHHHHHHHhhccccCChHH--------------HHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccCH
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHH----------HHHHHHHHHHHHHHhcCCCC--------------------HHH
Q 010976 202 TLHDAFYNWAIAISDRAKMRGRTKEAE----------ELWKQATKNYEKAVQLNWNS--------------------PQA 251 (496)
Q Consensus 202 ~~~~a~~~lg~~~~~~~~~~g~~~eA~----------~~~~~A~~~~~~Al~l~P~~--------------------~~a 251 (496)
+...++..+..+..+ .--+.+|+ +.-.++.+.|++|...-... ..+
T Consensus 180 ~~l~~L~~l~LAQAQ----E~~~~Kai~~~~k~~liAKLa~q~~~~Y~~a~~~l~~~~~~i~~~W~~~v~~K~~~~~A~A 255 (376)
T 3r9m_A 180 RLIEAYVIQCQAEAQ----EVTIARAIELKHAPGLIAALAYETANFYQKADHTLSSLEPAYSAKWRKYLHLKMCFYTAYA 255 (376)
T ss_dssp HHHHHHHHHHHHHHH----HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----HHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHh
Q 010976 252 LNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL 288 (496)
Q Consensus 252 ~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l 288 (496)
++..|..+...+++ .+||..++.|.+.
T Consensus 256 ~y~~a~~~~~~~k~----------GeaIa~L~~A~~~ 282 (376)
T 3r9m_A 256 YCYHGETLLASDKC----------GEAIRSLQEAEKL 282 (376)
T ss_dssp HHHHHHHHHHTTCH----------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCh----------HHHHHHHHHHHHH
No 375
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=24.71 E-value=91 Score=24.02 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=26.7
Q ss_pred HHHHHHHHHhcCCCCCCCCCcchhhhHHHHHHHHHHHHHhCCCCHH
Q 010976 160 YNWALVLQESADNVSLDSTSPSKDALLEEACKKYDEATRLCPTLHD 205 (496)
Q Consensus 160 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~l~P~~~~ 205 (496)
..+|..+...|+ ++.|+.+|-+|+..+|+-..
T Consensus 24 V~lGE~L~~~g~--------------~e~av~Hf~nAl~Vc~qP~~ 55 (95)
T 1om2_A 24 IQLGEELLAQGD--------------YEKGVDHLTNAIAVCGQPQQ 55 (95)
T ss_dssp HHHHHHHHHHTC--------------HHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHCCC--------------HHHHHHHHHHHHHHcCCHHH
Confidence 467888899999 99999999999998776443
No 376
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=24.31 E-value=3.2e+02 Score=23.07 Aligned_cols=60 Identities=12% Similarity=0.092 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCCC------HHHHHH-H--HHHHHHccCcchHHHhhhhHHHH
Q 010976 208 YNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNS------PQALNN-W--GLALQELSAIVPAREKQTIVRTA 278 (496)
Q Consensus 208 ~~lg~~~~~~~~~~g~~~eA~~~~~~A~~~~~~Al~l~P~~------~~a~~~-l--g~~l~~~g~~~~A~~~~~~~~~A 278 (496)
+.-|..+++ .|+|-+|- +.++..-...+.. .+.+.. + |..+.+.|+. ..|
T Consensus 36 ~~~~i~lFn----~g~yfeaH-------EvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~----------~GA 94 (161)
T 2ijq_A 36 VVHGVRLYN----SGEFHESH-------DCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDD----------DGM 94 (161)
T ss_dssp HHHHHHHHH----TTCHHHHH-------HHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCH----------HHH
T ss_pred HHHHHHHHh----CCCchHHH-------HHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCH----------HHH
Confidence 455677777 89999998 5666655554433 223333 3 2334455666 999
Q ss_pred HHHHHHHHHh
Q 010976 279 ISKFRAAIQL 288 (496)
Q Consensus 279 i~~~~~Al~l 288 (496)
...+++++..
T Consensus 95 ~~ll~~Al~~ 104 (161)
T 2ijq_A 95 RSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 377
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=22.42 E-value=1.5e+02 Score=25.99 Aligned_cols=35 Identities=11% Similarity=-0.162 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHhcCCCH
Q 010976 249 PQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFH 293 (496)
Q Consensus 249 ~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l~P~~~ 293 (496)
...++.+|.++...++| .+|..++.+|++.-|...
T Consensus 14 v~Y~YYlGr~~~~~~~y----------~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDF----------KQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHHhCH----------HHHHHHHHHHHHHCCHhH
Confidence 45678899999999999 999999999999988654
No 378
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=20.06 E-value=1.5e+02 Score=29.49 Aligned_cols=57 Identities=11% Similarity=-0.048 Sum_probs=35.7
Q ss_pred CCHHHHHHHHHHHHHccCcchHHHhhhhHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHcchhHH
Q 010976 247 NSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQL-----QFDFHRAIYNLGTVLYGLAEDTL 311 (496)
Q Consensus 247 ~~~~a~~~lg~~l~~~g~~~~A~~~~~~~~~Ai~~~~~Al~l-----~P~~~~a~~~lg~~~~~~g~~~~ 311 (496)
.++.++.|||.+-...-.. |+ ..++..|.+|+.. .-.+..-|..+|-.+++.++...
T Consensus 275 rYPmALgnLgDLEe~~pt~-------gr-~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~re 336 (550)
T 3u84_A 275 RYPMALGNLADLEELEPTP-------GR-PDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVRE 336 (550)
T ss_dssp TCHHHHHHHHHHHHHSCCT-------TC-CCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHH
T ss_pred hCchhhcchhhHhhcCCCC-------CC-CCHHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHH
Confidence 3566666666654322111 00 2577888888875 34566778888999999998433
Done!