Query 010977
Match_columns 496
No_of_seqs 368 out of 2151
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 06:42:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010977.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010977hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07418 MPP_PP7 PP7, metalloph 100.0 8.1E-73 1.8E-77 585.7 32.8 333 157-491 1-350 (377)
2 KOG0372 Serine/threonine speci 100.0 2.2E-74 4.8E-79 555.1 18.2 258 189-492 15-272 (303)
3 cd07420 MPP_RdgC Drosophila me 100.0 4.2E-70 9.1E-75 557.1 29.5 283 163-493 2-311 (321)
4 cd07417 MPP_PP5_C PP5, C-termi 100.0 5.5E-69 1.2E-73 548.9 27.4 290 151-493 2-291 (316)
5 KOG0376 Serine-threonine phosp 100.0 2.2E-68 4.7E-73 555.6 14.5 399 32-492 41-444 (476)
6 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.3E-65 2.9E-70 517.7 26.3 270 169-493 3-272 (285)
7 PTZ00480 serine/threonine-prot 100.0 1.6E-65 3.4E-70 522.9 26.6 258 188-492 30-288 (320)
8 KOG0374 Serine/threonine speci 100.0 5.8E-66 1.3E-70 527.9 23.0 260 188-493 30-291 (331)
9 PTZ00239 serine/threonine prot 100.0 4.6E-65 1E-69 517.2 27.2 271 168-492 3-273 (303)
10 KOG0377 Protein serine/threoni 100.0 4.9E-66 1.1E-70 527.6 16.3 297 144-492 99-419 (631)
11 PTZ00244 serine/threonine-prot 100.0 1.2E-64 2.6E-69 512.4 26.0 259 187-492 22-281 (294)
12 cd07416 MPP_PP2B PP2B, metallo 100.0 2.4E-64 5.1E-69 513.1 26.7 272 168-492 3-285 (305)
13 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 1.7E-64 3.6E-69 511.5 25.0 259 188-493 21-280 (293)
14 KOG0373 Serine/threonine speci 100.0 7.6E-65 1.6E-69 482.6 17.3 259 188-491 17-275 (306)
15 smart00156 PP2Ac Protein phosp 100.0 1.8E-63 4E-68 499.2 25.4 256 191-493 2-258 (271)
16 KOG0375 Serine-threonine phosp 100.0 1.4E-64 3E-69 507.3 15.4 260 189-489 60-327 (517)
17 cd07419 MPP_Bsu1_C Arabidopsis 100.0 5.8E-62 1.2E-66 497.0 26.9 270 183-493 14-300 (311)
18 KOG0371 Serine/threonine prote 100.0 3E-59 6.5E-64 453.0 12.4 257 189-491 32-288 (319)
19 cd00144 MPP_PPP_family phospho 100.0 1.3E-31 2.7E-36 258.5 20.1 216 224-489 1-223 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 99.9 5.5E-24 1.2E-28 210.7 15.1 126 221-349 1-145 (245)
21 cd07423 MPP_PrpE Bacillus subt 99.9 1.6E-22 3.6E-27 198.5 15.2 123 221-348 1-141 (234)
22 cd07413 MPP_PA3087 Pseudomonas 99.9 8E-22 1.7E-26 192.7 15.8 118 224-347 2-143 (222)
23 cd07425 MPP_Shelphs Shewanella 99.9 5.1E-22 1.1E-26 192.3 13.5 121 224-346 1-137 (208)
24 cd07422 MPP_ApaH Escherichia c 99.9 3E-22 6.6E-27 199.8 11.2 119 223-349 1-124 (257)
25 PRK00166 apaH diadenosine tetr 99.9 1.1E-21 2.3E-26 197.8 14.8 121 221-349 1-126 (275)
26 PRK11439 pphA serine/threonine 99.9 1.3E-21 2.9E-26 190.3 14.3 127 214-347 10-146 (218)
27 TIGR00668 apaH bis(5'-nucleosy 99.9 4.1E-22 8.9E-27 200.2 10.8 120 221-349 1-126 (279)
28 cd07424 MPP_PrpA_PrpB PrpA and 99.9 7.9E-21 1.7E-25 183.1 15.7 122 221-349 1-132 (207)
29 cd07421 MPP_Rhilphs Rhilph pho 99.8 4.2E-20 9.1E-25 186.4 15.3 74 222-296 3-82 (304)
30 PHA02239 putative protein phos 99.8 3.8E-20 8.2E-25 182.6 13.1 125 221-348 1-167 (235)
31 PRK09968 serine/threonine-spec 99.8 6.5E-20 1.4E-24 178.7 12.5 130 212-348 6-145 (218)
32 PF08321 PPP5: PPP5 TPR repeat 99.6 1.1E-15 2.5E-20 130.8 8.8 93 102-215 1-95 (95)
33 PF00149 Metallophos: Calcineu 99.2 7.9E-11 1.7E-15 102.8 10.2 76 222-298 2-82 (200)
34 KOG0376 Serine-threonine phosp 99.2 1.5E-12 3.3E-17 137.6 -3.7 287 187-481 12-300 (476)
35 cd00841 MPP_YfcE Escherichia c 98.9 2.5E-08 5.5E-13 91.0 12.0 60 222-295 1-60 (155)
36 PRK09453 phosphodiesterase; Pr 98.8 1.5E-08 3.2E-13 95.8 8.6 69 221-295 1-77 (182)
37 TIGR00040 yfcE phosphoesterase 98.7 1.3E-07 2.8E-12 87.2 11.8 64 221-294 1-64 (158)
38 COG0639 ApaH Diadenosine tetra 98.7 2.2E-08 4.9E-13 88.0 6.0 146 296-480 3-155 (155)
39 PF12850 Metallophos_2: Calcin 98.6 1.9E-07 4.2E-12 84.2 8.6 61 221-295 1-61 (156)
40 cd07379 MPP_239FB Homo sapiens 98.4 2.8E-06 6.2E-11 76.2 11.7 61 222-294 1-63 (135)
41 cd07397 MPP_DevT Myxococcus xa 98.3 1.7E-06 3.6E-11 86.0 9.1 112 222-348 2-159 (238)
42 cd00838 MPP_superfamily metall 98.3 3.9E-06 8.4E-11 71.7 10.2 67 224-292 1-69 (131)
43 cd07392 MPP_PAE1087 Pyrobaculu 98.3 1.1E-05 2.3E-10 75.1 12.3 65 223-295 1-66 (188)
44 cd07388 MPP_Tt1561 Thermus the 98.2 3.4E-06 7.4E-11 83.2 7.3 71 221-294 5-75 (224)
45 cd07394 MPP_Vps29 Homo sapiens 98.1 3.5E-05 7.5E-10 73.2 11.5 58 222-293 1-64 (178)
46 PRK05340 UDP-2,3-diacylglucosa 97.8 7E-05 1.5E-09 74.0 8.6 70 221-294 1-83 (241)
47 cd07404 MPP_MS158 Microscilla 97.8 2.3E-05 4.9E-10 72.5 4.2 68 223-294 1-68 (166)
48 cd07385 MPP_YkuE_C Bacillus su 97.7 5.5E-05 1.2E-09 72.8 6.1 71 221-295 2-77 (223)
49 cd07403 MPP_TTHA0053 Thermus t 97.7 0.00028 6.1E-09 63.4 10.1 55 225-292 2-56 (129)
50 TIGR01854 lipid_A_lpxH UDP-2,3 97.7 9.4E-05 2E-09 72.7 7.3 67 224-294 2-81 (231)
51 cd07400 MPP_YydB Bacillus subt 97.7 0.00066 1.4E-08 61.0 12.0 42 251-293 37-80 (144)
52 PRK11340 phosphodiesterase Yae 97.7 0.00011 2.4E-09 74.1 7.4 71 220-294 49-125 (271)
53 cd07399 MPP_YvnB Bacillus subt 97.6 0.0026 5.7E-08 61.9 15.9 69 222-293 2-81 (214)
54 COG0622 Predicted phosphoester 97.5 0.0009 2E-08 63.6 10.5 65 221-295 2-66 (172)
55 cd07390 MPP_AQ1575 Aquifex aeo 97.4 0.0006 1.3E-08 63.8 8.3 69 223-296 1-84 (168)
56 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.3 0.00051 1.1E-08 69.4 6.9 73 223-295 1-87 (262)
57 TIGR03729 acc_ester putative p 97.3 0.0005 1.1E-08 67.7 6.5 68 222-294 1-74 (239)
58 cd00840 MPP_Mre11_N Mre11 nucl 97.2 0.0008 1.7E-08 64.3 6.3 73 222-296 1-91 (223)
59 PRK04036 DNA polymerase II sma 97.1 0.0019 4E-08 71.1 9.4 75 219-295 242-344 (504)
60 PHA02546 47 endonuclease subun 97.1 0.00089 1.9E-08 69.8 6.4 73 221-295 1-90 (340)
61 cd07396 MPP_Nbla03831 Homo sap 97.1 0.0014 3E-08 65.8 7.5 73 222-296 2-88 (267)
62 cd07398 MPP_YbbF-LpxH Escheric 97.0 0.0014 3E-08 62.8 6.4 23 419-441 177-199 (217)
63 cd07402 MPP_GpdQ Enterobacter 96.9 0.0035 7.5E-08 61.0 8.3 71 222-294 1-83 (240)
64 PRK11148 cyclic 3',5'-adenosin 96.9 0.0029 6.4E-08 63.6 8.0 72 221-294 15-98 (275)
65 cd08163 MPP_Cdc1 Saccharomyces 96.8 0.076 1.6E-06 53.5 17.3 23 418-440 203-225 (257)
66 cd07391 MPP_PF1019 Pyrococcus 96.8 0.0039 8.4E-08 58.5 7.5 45 251-295 43-89 (172)
67 TIGR00619 sbcd exonuclease Sbc 96.8 0.003 6.4E-08 63.3 6.9 73 221-295 1-89 (253)
68 PRK10966 exonuclease subunit S 96.6 0.004 8.6E-08 66.7 7.0 72 221-295 1-88 (407)
69 COG2908 Uncharacterized protei 96.5 0.0075 1.6E-07 59.9 7.6 101 225-349 2-118 (237)
70 cd07393 MPP_DR1119 Deinococcus 96.5 0.0068 1.5E-07 59.6 7.2 69 223-293 1-83 (232)
71 cd07383 MPP_Dcr2 Saccharomyces 96.4 0.0079 1.7E-07 57.4 6.5 71 221-292 3-87 (199)
72 TIGR00024 SbcD_rel_arch putati 96.3 0.01 2.3E-07 58.6 7.3 70 221-295 15-103 (225)
73 cd07380 MPP_CWF19_N Schizosacc 96.3 0.0094 2E-07 55.4 6.2 68 224-292 1-68 (150)
74 cd08165 MPP_MPPE1 human MPPE1 96.2 0.0068 1.5E-07 56.3 5.2 46 250-295 39-90 (156)
75 TIGR00583 mre11 DNA repair pro 96.2 0.013 2.8E-07 62.8 7.8 54 220-275 3-68 (405)
76 COG2129 Predicted phosphoester 96.2 0.16 3.5E-06 50.3 14.7 178 220-441 3-185 (226)
77 cd00839 MPP_PAPs purple acid p 95.9 0.012 2.5E-07 59.2 5.3 70 221-296 5-83 (294)
78 cd07395 MPP_CSTP1 Homo sapiens 95.8 0.031 6.7E-07 55.5 8.1 74 221-294 5-99 (262)
79 COG1409 Icc Predicted phosphoh 95.7 0.037 8E-07 54.6 7.9 71 222-296 2-80 (301)
80 cd07386 MPP_DNA_pol_II_small_a 95.6 0.023 5E-07 56.2 6.1 70 224-295 2-95 (243)
81 KOG0918 Selenium-binding prote 95.5 0.00077 1.7E-08 70.9 -5.1 97 248-350 46-142 (476)
82 cd07401 MPP_TMEM62_N Homo sapi 95.4 0.034 7.3E-07 55.7 6.7 71 223-295 2-90 (256)
83 cd00845 MPP_UshA_N_like Escher 95.2 0.034 7.4E-07 54.7 5.8 67 222-294 2-82 (252)
84 cd07384 MPP_Cdc1_like Saccharo 95.1 0.032 7E-07 52.6 5.2 45 251-295 47-101 (171)
85 cd08166 MPP_Cdc1_like_1 unchar 95.0 0.038 8.1E-07 53.7 5.4 44 251-294 44-93 (195)
86 COG4186 Predicted phosphoester 95.0 0.12 2.5E-06 48.7 8.1 71 222-296 5-88 (186)
87 cd08164 MPP_Ted1 Saccharomyces 94.2 0.09 1.9E-06 51.0 5.8 67 228-295 24-112 (193)
88 COG1408 Predicted phosphohydro 94.0 0.13 2.8E-06 52.7 6.8 73 220-296 44-120 (284)
89 COG1407 Predicted ICC-like pho 93.7 0.13 2.9E-06 51.3 5.9 72 221-296 20-112 (235)
90 KOG3662 Cell division control 92.4 0.32 6.9E-06 52.2 7.0 57 236-293 81-143 (410)
91 COG0420 SbcD DNA repair exonuc 92.3 0.36 7.7E-06 51.1 7.2 74 221-296 1-90 (390)
92 PLN02533 probable purple acid 92.1 0.2 4.2E-06 54.2 4.9 70 221-295 140-212 (427)
93 cd07412 MPP_YhcR_N Bacillus su 92.0 0.18 3.9E-06 51.3 4.5 67 222-294 2-88 (288)
94 cd07410 MPP_CpdB_N Escherichia 91.9 0.24 5.2E-06 49.8 5.2 66 222-293 2-94 (277)
95 PF14582 Metallophos_3: Metall 91.6 0.2 4.4E-06 49.8 4.0 74 221-296 6-104 (255)
96 cd07378 MPP_ACP5 Homo sapiens 89.7 0.63 1.4E-05 46.3 5.8 71 222-294 2-83 (277)
97 cd07408 MPP_SA0022_N Staphyloc 88.7 0.58 1.3E-05 46.7 4.7 65 222-293 2-81 (257)
98 cd07411 MPP_SoxB_N Thermus the 87.6 0.93 2E-05 45.4 5.4 65 223-294 3-95 (264)
99 KOG3325 Membrane coat complex 86.6 7 0.00015 36.8 9.9 62 223-294 3-66 (183)
100 cd07409 MPP_CD73_N CD73 ecto-5 84.6 2.1 4.5E-05 43.5 6.1 67 222-294 2-94 (281)
101 TIGR00282 metallophosphoestera 84.5 1.9 4.2E-05 43.9 5.8 69 221-295 1-72 (266)
102 KOG2863 RNA lariat debranching 84.1 1.9 4.1E-05 45.6 5.6 74 221-295 1-89 (456)
103 PF06874 FBPase_2: Firmicute f 82.8 1.9 4.1E-05 48.5 5.3 42 251-297 186-227 (640)
104 KOG2476 Uncharacterized conser 82.7 2.9 6.4E-05 45.4 6.5 71 220-291 5-75 (528)
105 cd00842 MPP_ASMase acid sphing 81.6 3.6 7.7E-05 41.6 6.5 64 234-297 53-125 (296)
106 COG1768 Predicted phosphohydro 80.1 3.3 7.1E-05 40.1 5.2 47 245-295 39-87 (230)
107 PRK09419 bifunctional 2',3'-cy 78.7 2.6 5.7E-05 51.1 5.1 67 221-293 661-735 (1163)
108 cd07407 MPP_YHR202W_N Saccharo 76.4 3.3 7E-05 42.4 4.3 68 222-294 7-97 (282)
109 COG1311 HYS2 Archaeal DNA poly 76.4 11 0.00023 41.5 8.3 77 221-297 226-324 (481)
110 cd07406 MPP_CG11883_N Drosophi 74.2 5.9 0.00013 39.5 5.5 57 231-293 21-82 (257)
111 cd07382 MPP_DR1281 Deinococcus 72.7 8 0.00017 39.1 6.0 67 222-294 1-70 (255)
112 cd07405 MPP_UshA_N Escherichia 67.3 6.7 0.00014 39.9 4.2 67 222-294 2-87 (285)
113 COG3855 Fbp Uncharacterized pr 64.9 4.9 0.00011 43.9 2.7 41 251-296 192-232 (648)
114 PRK09420 cpdB bifunctional 2', 62.3 11 0.00023 43.2 5.0 66 222-293 27-121 (649)
115 cd08162 MPP_PhoA_N Synechococc 61.4 13 0.00028 38.6 5.0 65 223-293 3-90 (313)
116 COG0737 UshA 5'-nucleotidase/2 60.7 11 0.00024 41.6 4.6 68 222-295 28-116 (517)
117 PF04042 DNA_pol_E_B: DNA poly 60.1 17 0.00037 34.7 5.3 73 223-296 1-93 (209)
118 TIGR01390 CycNucDiestase 2',3' 58.0 13 0.00029 42.2 4.8 66 222-293 4-98 (626)
119 PRK09983 pflD putative formate 56.7 16 0.00034 42.7 5.1 117 55-176 183-301 (765)
120 TIGR01530 nadN NAD pyrophospha 53.7 20 0.00043 40.1 5.2 40 250-294 50-94 (550)
121 PRK09419 bifunctional 2',3'-cy 53.4 16 0.00035 44.5 4.7 42 222-264 43-100 (1163)
122 PTZ00235 DNA polymerase epsilo 50.0 47 0.001 34.4 6.8 75 219-294 26-122 (291)
123 PRK11907 bifunctional 2',3'-cy 49.8 22 0.00049 41.8 5.0 66 222-293 117-212 (814)
124 cd01677 PFL2_DhaB_BssA Pyruvat 49.4 23 0.0005 41.5 5.0 116 57-176 192-309 (781)
125 PTZ00422 glideosome-associated 49.4 29 0.00063 37.4 5.4 73 221-294 27-109 (394)
126 KOG3947 Phosphoesterases [Gene 49.1 27 0.00058 36.0 4.8 67 219-295 60-127 (305)
127 TIGR01774 PFL2-3 pyruvate form 48.4 26 0.00055 41.1 5.1 115 58-176 195-311 (786)
128 KOG1432 Predicted DNA repair e 48.4 30 0.00065 36.7 5.1 45 251-296 102-149 (379)
129 PRK09558 ushA bifunctional UDP 45.0 32 0.00069 38.4 5.1 67 222-294 36-121 (551)
130 KOG1378 Purple acid phosphatas 43.4 32 0.0007 37.6 4.6 19 422-440 323-341 (452)
131 cd07387 MPP_PolD2_C PolD2 (DNA 39.8 1.2E+02 0.0025 30.9 7.8 75 223-297 2-110 (257)
132 KOG3339 Predicted glycosyltran 37.4 94 0.002 30.4 6.2 87 251-346 40-143 (211)
133 PRK09418 bifunctional 2',3'-cy 34.6 52 0.0011 38.6 4.8 41 222-263 41-97 (780)
134 KOG2679 Purple (tartrate-resis 33.5 54 0.0012 34.0 4.1 72 220-295 43-127 (336)
135 PF02875 Mur_ligase_C: Mur lig 28.2 1.4E+02 0.003 24.6 5.2 70 222-291 13-82 (91)
136 PF06874 FBPase_2: Firmicute f 20.1 89 0.0019 35.7 3.1 58 419-489 507-571 (640)
No 1
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=8.1e-73 Score=585.75 Aligned_cols=333 Identities=52% Similarity=0.964 Sum_probs=297.0
Q ss_pred CCCCCCCCHHHHHHHHHHhhhcCCC-CCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHH
Q 010977 157 WPRNGRISLEWIQLLISTFKWSSWK-DPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHD 235 (496)
Q Consensus 157 ~P~~~~~t~~~i~~l~~~~~~~~~~-~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~d 235 (496)
||..+.+|.+|++.||+.|++..++ .|.++...++.+++.+||.+|+++|++||++++|+++...+++||||||||+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~d 80 (377)
T cd07418 1 WPDGGALTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHD 80 (377)
T ss_pred CCCCCccCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHH
Confidence 8888999999999999999999777 788888999999999999999999999999999987666799999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchh
Q 010977 236 LVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDC 315 (496)
Q Consensus 236 L~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~ 315 (496)
|+++|+ ..|+++.+..|||||||||||++|+||+.+|+++|+.+|++|++||||||.+.++..|||..|+..+|+.. +
T Consensus 81 L~~ll~-~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~-~ 158 (377)
T cd07418 81 VLFLLE-DAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDK-G 158 (377)
T ss_pred HHHHHH-HhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCch-H
Confidence 999999 99998877779999999999999999999999999999999999999999999999999999999999865 6
Q ss_pred hHHHHhhhhhhcCCcceeEeeceEEEEecCCCCCCCCCccccccccccc------ccccCCCCCHHHHHhhccccccCCC
Q 010977 316 KLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQ------KLDTLSLGSLREFAKVNRFLEDVPE 389 (496)
Q Consensus 316 ~~l~~~~~~~f~~LPlaaii~~~il~vHGGI~~s~~~~~~~~~~~~k~~------~~~~~~l~slddI~~i~R~~~~p~~ 389 (496)
..+|+.++++|++||+++++++++|||||||++.+.+....+..+.+.. ....+.+.++++|.+++|+..+|+.
T Consensus 159 ~~l~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~ 238 (377)
T cd07418 159 KHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPG 238 (377)
T ss_pred HHHHHHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCC
Confidence 6799999999999999999999999999999876643222211111111 1235678899999999998766664
Q ss_pred cc---ccccccccCCCCCCCccccc-CCCeeeeChhHHHHHHHhcCceEEEeecCCCCCCCCCCccccccCCccccccCC
Q 010977 390 ND---LLSDVLWSDPSSEAGLRENT-KKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTV 465 (496)
Q Consensus 390 ~~---l~~DLLWSDP~~~~g~~~n~-RG~g~~FG~d~~~~FL~~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~ 465 (496)
.+ +++|+|||||....|+.+|. ||.|+.||++++++||++|++++||||||+++++.+|+++.++++||++.|+..
T Consensus 239 ~~~~~i~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~ 318 (377)
T cd07418 239 EGSNLIPGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVE 318 (377)
T ss_pred CCccccceeeEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCC
Confidence 43 57899999999889998885 999999999999999999999999999999999999999999999999988555
Q ss_pred CCeEEEEecCCCCcc------ccCcceeEEEe
Q 010977 466 SGELYTLFTAPNYPQ------VQILLGCTMHS 491 (496)
Q Consensus 466 ~gkviTVFSApnY~~------~~~n~g~~l~~ 491 (496)
+|+|+|||||||||+ ..+|.||++.+
T Consensus 319 ~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~ 350 (377)
T cd07418 319 SGKLITLFSAPDYPQFQATEERYNNKGAYIIL 350 (377)
T ss_pred CCcEEEEecCCccccccccccccCcceEEEEE
Confidence 699999999999994 56899998876
No 2
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-74 Score=555.13 Aligned_cols=258 Identities=35% Similarity=0.614 Sum_probs=245.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHH
Q 010977 189 VMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLE 268 (496)
Q Consensus 189 ~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlE 268 (496)
.+++.+|..||.+++++|.+|||+..++ +|++|||||||||+||+.+|+ +.|.+++++ |+|||||||||.+|+|
T Consensus 15 li~E~eV~~LC~~~~eiL~~E~NV~~i~----tPvtvcGDIHGQf~Dllelf~-igG~~~~t~-YLFLGDyVDRG~~SvE 88 (303)
T KOG0372|consen 15 LIAESEVKALCAKVREILVEESNVQRID----TPVTVCGDIHGQFYDLLELFR-IGGDVPETN-YLFLGDYVDRGYYSVE 88 (303)
T ss_pred CCcHHHHHHHHHHHHHHHhcCCCceecC----CCcEEeecccchHHHHHHHHH-hCCCCCCCc-eEeecchhccccchHH
Confidence 5789999999999999999999999998 689999999999999999999 888888777 9999999999999999
Q ss_pred HHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhhhhhhcCCcceeEeeceEEEEecCCCC
Q 010977 269 VLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFR 348 (496)
Q Consensus 269 vL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI~~ 348 (496)
++++|++||++||++|++||||||++.+++.|||++||.+|||.. .+|+.+++.|+.||++|+|++++||||||++|
T Consensus 89 t~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~---~vWr~c~eiFdyL~l~aiid~kifCVHGGlSP 165 (303)
T KOG0372|consen 89 TFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSA---NVWRYCTEIFDYLSLAAIIDGKIFCVHGGLSP 165 (303)
T ss_pred HHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCCh---HHHHHHHHHHHhhhHhheecCcEEEEcCCCCc
Confidence 999999999999999999999999999999999999999999965 79999999999999999999999999999976
Q ss_pred CCCCCcccccccccccccccCCCCCHHHHHhhccccccCCCccccccccccCCCCCCCcccccCCCeeeeChhHHHHHHH
Q 010977 349 RTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLK 428 (496)
Q Consensus 349 s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~~~n~RG~g~~FG~d~~~~FL~ 428 (496)
+ +.++++|+.++|..+.| ..+.++|+|||||.+.+||..|+||+|++||.++++.|++
T Consensus 166 ~---------------------i~~lDqIr~lDR~~Eip-h~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~ 223 (303)
T KOG0372|consen 166 S---------------------IQTLDQIRVLDRKQEVP-HDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLE 223 (303)
T ss_pred c---------------------hhhHHHHHHhhccccCC-CCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHH
Confidence 4 58999999999998654 6778999999999999999999999999999999999999
Q ss_pred hcCceEEEeecCCCCCCCCCCccccccCCccccccCCCCeEEEEecCCCCccccCcceeEEEee
Q 010977 429 ENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSR 492 (496)
Q Consensus 429 ~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~~~~n~g~~l~~~ 492 (496)
.||+.+|+|+|| .+++||++.+ +++++|||||||||..-.|-+|||.+.
T Consensus 224 ~N~~~~I~RaHQ------------Lv~eGyk~~F---~~~v~TVWSAPNYCYrCGN~AsIl~ld 272 (303)
T KOG0372|consen 224 ANGLSLICRAHQ------------LVMEGYKWHF---DEKVVTVWSAPNYCYRCGNVAAILELD 272 (303)
T ss_pred hCChHHHHHHHH------------HHHhhHHHhc---CCceEEEecCCchhhhcCChHHheeec
Confidence 999999999999 4799999976 499999999999999999999999874
No 3
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=4.2e-70 Score=557.09 Aligned_cols=283 Identities=32% Similarity=0.556 Sum_probs=254.8
Q ss_pred CCHHHHHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHH
Q 010977 163 ISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEE 242 (496)
Q Consensus 163 ~t~~~i~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~ 242 (496)
+|.+.++.+++.+.... .|+.+++.+||.+|+++|++||++++|+.+..++++||||||||+++|+++|+
T Consensus 2 ~~~~~~~~~i~~~~~~~---------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~- 71 (321)
T cd07420 2 LTKDHIDALIEAFKEKQ---------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFY- 71 (321)
T ss_pred CCHHHHHHHHHHHHccC---------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHH-
Confidence 89999999999988654 48899999999999999999999999987666799999999999999999999
Q ss_pred hcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhh
Q 010977 243 NAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKC 322 (496)
Q Consensus 243 ~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~ 322 (496)
..|+|+.+++|||||||||||++|+||+.+|++||+.||++|++||||||.+.++..|||+.||..+|+.. +..+|+.+
T Consensus 72 ~~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~-~~~l~~~~ 150 (321)
T cd07420 72 KNGLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLH-GKKILRLL 150 (321)
T ss_pred HcCCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCcc-HHHHHHHH
Confidence 99999877779999999999999999999999999999999999999999999999999999999999864 56799999
Q ss_pred hhhhcCCcceeEeeceEEEEecCCCCCCCCCcccccccccccccccCCCCCHHHHHhhccccc----cCC----------
Q 010977 323 LECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLE----DVP---------- 388 (496)
Q Consensus 323 ~~~f~~LPlaaii~~~il~vHGGI~~s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~----~p~---------- 388 (496)
.++|++||+||+|++++|||||||++. .++++|.++.|+.. .|+
T Consensus 151 ~~~F~~LPlaaii~~~i~cvHGGi~~~----------------------~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~ 208 (321)
T cd07420 151 EDVFSWLPLATIIDNKILVVHGGISDS----------------------TDLDLLDKIDRHKYVSVLRPPLRKGMEELTG 208 (321)
T ss_pred HHHHHhCCceEEEcCCEEEEeCCCCCc----------------------cCHHHHHhhhccccccccCCCcccccccccc
Confidence 999999999999999999999999742 47888888877421 111
Q ss_pred ------------CccccccccccCCCCCCCccc-ccCCCeeeeChhHHHHHHHhcCceEEEeecCCCCCCCCCCcccccc
Q 010977 389 ------------ENDLLSDVLWSDPSSEAGLRE-NTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNML 455 (496)
Q Consensus 389 ------------~~~l~~DLLWSDP~~~~g~~~-n~RG~g~~FG~d~~~~FL~~n~l~~IIRgHe~~d~~~~r~~~~~v~ 455 (496)
++.++.|+|||||....++.+ +.||.|+.||++++++||++||+++||||||+ ++
T Consensus 209 ~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~------------v~ 276 (321)
T cd07420 209 EEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHEC------------KP 276 (321)
T ss_pred ccccccccccccccchhheeeecCCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChh------------hh
Confidence 124688999999998777444 56999999999999999999999999999996 68
Q ss_pred CCccccccCCCCeEEEEecCCCCccccCcceeEEEeee
Q 010977 456 NGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSRR 493 (496)
Q Consensus 456 ~Gy~~~h~~~~gkviTVFSApnY~~~~~n~g~~l~~~~ 493 (496)
+||++.|+ |+|+|||||||||+..+|.||+|++..
T Consensus 277 ~G~~~~~~---~~~iTvFSa~nY~~~~~N~gavl~i~~ 311 (321)
T cd07420 277 EGYEFCHN---NKVITIFSASNYYEEGSNRGAYIKLGP 311 (321)
T ss_pred cceEEecC---CeEEEEecCCccCCCCCccEEEEEECC
Confidence 99999884 999999999999999999999999864
No 4
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=5.5e-69 Score=548.91 Aligned_cols=290 Identities=36% Similarity=0.639 Sum_probs=268.8
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCc
Q 010977 151 DTLPLSWPRNGRISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDIL 230 (496)
Q Consensus 151 ~~~~l~~P~~~~~t~~~i~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIH 230 (496)
+||++.|| ++|.++++.+++.++... .|+.+++.+||.+|+++|++||++++++.|...+++||||||
T Consensus 2 ~~~~~~~~---~i~~~~~~~~~~~~~~~~---------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIH 69 (316)
T cd07417 2 DGPRLEDE---KVTLEFVKEMIEWFKDQK---------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTH 69 (316)
T ss_pred CCcccCCC---CCCHHHHHHHHHHHHccC---------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeeccc
Confidence 57889776 899999999999998864 488999999999999999999999999876667899999999
Q ss_pred CcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHh
Q 010977 231 GQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKF 310 (496)
Q Consensus 231 G~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky 310 (496)
|||.+|.++|+ ..|+|+.+++|||||||||||++|+||+.+|+++|+.+|++|++||||||.+.++..|||..|+..+|
T Consensus 70 G~~~dL~~ll~-~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~ 148 (316)
T cd07417 70 GQFYDLLNIFE-LNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKY 148 (316)
T ss_pred CCHHHHHHHHH-hcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcc
Confidence 99999999999 99998877789999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhhHHHHhhhhhhcCCcceeEeeceEEEEecCCCCCCCCCcccccccccccccccCCCCCHHHHHhhccccccCCCc
Q 010977 311 GKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPEN 390 (496)
Q Consensus 311 ~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI~~s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~~~ 390 (496)
+.. +|..+.++|++||++++++++++||||||++. ...+++++.++.|+. +++.+
T Consensus 149 ~~~----l~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~--------------------~~~~l~~i~~i~r~~-~~~~~ 203 (316)
T cd07417 149 NEQ----MFDLFSEVFNWLPLAHLINGKVLVVHGGLFSD--------------------DGVTLDDIRKIDRFR-QPPDS 203 (316)
T ss_pred cHH----HHHHHHHHHHhchHhheeCCeEEEEccccccC--------------------CCccHHHhhcccCCC-CCCcc
Confidence 754 99999999999999999999999999999542 347899999999986 55677
Q ss_pred cccccccccCCCCCCCcccccCCCeeeeChhHHHHHHHhcCceEEEeecCCCCCCCCCCccccccCCccccccCCCCeEE
Q 010977 391 DLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELY 470 (496)
Q Consensus 391 ~l~~DLLWSDP~~~~g~~~n~RG~g~~FG~d~~~~FL~~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkvi 470 (496)
++++|+|||||....+|.+|+||.|+.||++++++||++||+++||||||+ +++||++.| +|+|+
T Consensus 204 ~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~---~~~~~ 268 (316)
T cd07417 204 GLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHEV------------KDEGYEVEH---DGKCI 268 (316)
T ss_pred ccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEECCcc------------cceeEEEec---CCeEE
Confidence 889999999999889999999999999999999999999999999999996 689999987 49999
Q ss_pred EEecCCCCccccCcceeEEEeee
Q 010977 471 TLFTAPNYPQVQILLGCTMHSRR 493 (496)
Q Consensus 471 TVFSApnY~~~~~n~g~~l~~~~ 493 (496)
|||||||||+...|.||+|.+..
T Consensus 269 TvfSa~~Y~~~~~N~ga~~~i~~ 291 (316)
T cd07417 269 TVFSAPNYCDQMGNKGAFIRITG 291 (316)
T ss_pred EEeCCccccCCCCcceEEEEEeC
Confidence 99999999999999999999874
No 5
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=2.2e-68 Score=555.60 Aligned_cols=399 Identities=32% Similarity=0.532 Sum_probs=365.1
Q ss_pred hhHHHHHHHHHHhccccCCcccccchhhHHHHHHHhhh-hhhhhhhhHHHHHhhhhccCCCchhHHHHHHHHHHHhhhhh
Q 010977 32 ENLRRVFMIFEIAGGVVNGRTKQVTEADAEQLWCSSVD-GVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVS 110 (496)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~i~ 110 (496)
.+.|++.+++....|.+..+..+..|.|.+.+.||.-+ ..|.+..+-.+-++-.++.....|++++++++++ ||++++
T Consensus 41 ~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r~~~-Ec~~~v 119 (476)
T KOG0376|consen 41 FANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTAVMALGEFKKALLDLEKVKKLAPNDPDATRKID-ECNKIV 119 (476)
T ss_pred echhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHHHHhHHHHHHHHHHHHHhhhcCcCcHHHHHHHH-HHHHHH
Confidence 46789999999999999999999999999999999999 6668888999999999999999999999999875 899999
Q ss_pred hhhhhhHHhhhhhhhhhhhccchhhhh-ccCCCccCcc-cC--CCCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCCccc
Q 010977 111 KQRVFDSSLQGLLEELQVEVGSTMRER-LVGGKLENLT-KE--QDTLPLSWPRNGRISLEWIQLLISTFKWSSWKDPKEF 186 (496)
Q Consensus 111 ~~~~fe~ai~~~~~~~~~~~~~~~~~~-~~g~~~e~~~-~~--~~~~~l~~P~~~~~t~~~i~~l~~~~~~~~~~~~~~~ 186 (496)
++.+||+||.....+.. +..++ + ++++++ ++ +.|+.+ +.+++|.+|++.+|+.++.++
T Consensus 120 s~~~fe~ai~~~~~d~~-----s~~~~~~---~~~~~~~i~~~y~g~~l---e~~kvt~e~vk~~~~~~~~~~------- 181 (476)
T KOG0376|consen 120 SEEKFEKAILTPEGDKK-----SVVEMKI---DEEDMDLIESDYSGPVL---EDHKVTLEFVKTLMEVFKNQK------- 181 (476)
T ss_pred HHHhhhhcccCCccCCc-----ccccccc---ccccccccccccCCccc---ccchhhHHHHHHHHHhhhccc-------
Confidence 99999999999543322 22222 2 445555 33 467777 666899999999999998876
Q ss_pred ccCCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCc
Q 010977 187 RNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG 266 (496)
Q Consensus 187 ~~~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S 266 (496)
.|+..++.+|+..+..+++++|++++++.|.+..+.|+||+|||+++++++|. +.|.|+.+.+|+|+||+||||.+|
T Consensus 182 --~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~-l~g~Ps~t~~ylfngdfv~rgs~s 258 (476)
T KOG0376|consen 182 --KLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFE-LNGLPSETNPYLFNGDFVDRGSWS 258 (476)
T ss_pred --ccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHh-hcCCCCCcccccccCceeeecccc
Confidence 46778888999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhhhhhhcCCcceeEeeceEEEEecCC
Q 010977 267 LEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGL 346 (496)
Q Consensus 267 lEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI 346 (496)
.|++..+++.|+.+|+++|++|||||+..||+.|||.+++..+|..+ .+..+.++|.+||++.+|+++++.+|||+
T Consensus 259 ~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~----~~~~f~~~f~~LPl~~~i~~~~~~~hggl 334 (476)
T KOG0376|consen 259 VEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEE----MFNLFSEVFIWLPLAHLINNKVLVMHGGL 334 (476)
T ss_pred eeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHH----HHHhhhhhhccccchhhhcCceEEEecCc
Confidence 99999999999999999999999999999999999999999999876 88888899999999999999999999999
Q ss_pred CCCCCCCcccccccccccccccCCCCCHHHHHhhccccccCCCccccccccccCCCCCCCcccccCCCeeeeChhHHHHH
Q 010977 347 FRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEF 426 (496)
Q Consensus 347 ~~s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~~~n~RG~g~~FG~d~~~~F 426 (496)
++.. -.+++|+++|.|+ ..|++.+.++++|||||+..+|.++|+||.|+.||+|++++|
T Consensus 335 f~~~--------------------~v~l~d~r~i~r~-~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f 393 (476)
T KOG0376|consen 335 FSPD--------------------GVTLEDFRNIDRF-EQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERF 393 (476)
T ss_pred CCCC--------------------CccHHHHHhhhhc-cCCcccccccccccCCCccccCCCccccCceeeeCCCchhhH
Confidence 8754 3679999999999 478899999999999999999999999999999999999999
Q ss_pred HHhcCceEEEeecCCCCCCCCCCccccccCCccccccCCCCeEEEEecCCCCccccCcceeEEEee
Q 010977 427 LKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSR 492 (496)
Q Consensus 427 L~~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~~~~n~g~~l~~~ 492 (496)
|+.|++++||||||++ +.||++.| +|+|+|||||||||+...|.|+.+|+.
T Consensus 394 ~~~n~l~~i~rshe~~------------d~gy~~eh---~g~l~tvfsapnycd~~~n~ga~i~~~ 444 (476)
T KOG0376|consen 394 LQDNNLDKIIRSHEVK------------DEGYEVEH---SGKLITVFSAPNYCDQMGNKGAFIHLE 444 (476)
T ss_pred HhhcchHHHhhccccC------------CCceeeec---CCcEEEEecCcchhhhcCCcceEEEec
Confidence 9999999999999975 68999999 499999999999999999999999985
No 6
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.3e-65 Score=517.68 Aligned_cols=270 Identities=38% Similarity=0.661 Sum_probs=247.6
Q ss_pred HHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHHhcCCCC
Q 010977 169 QLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPS 248 (496)
Q Consensus 169 ~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p~ 248 (496)
+.+++.+.... .++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..++++
T Consensus 3 ~~~~~~~~~~~---------~l~~~~~~~l~~~~~~il~~e~~~~~i~----~~i~vvGDIHG~~~dL~~ll~-~~~~~~ 68 (285)
T cd07415 3 DKWIEQLKKCE---------LLPESEVKSLCEKAKEILVKESNVQRVR----SPVTVCGDIHGQFYDLLELFR-VGGDPP 68 (285)
T ss_pred HHHHHHHHccC---------CCCHHHHHHHHHHHHHHHHhCCCEEecC----CCEEEEEeCCCCHHHHHHHHH-HcCCCC
Confidence 45666665433 4789999999999999999999999997 689999999999999999999 889877
Q ss_pred CCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhhhhhhcC
Q 010977 249 DHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRT 328 (496)
Q Consensus 249 ~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~~ 328 (496)
.+. |||||||||||++|+|++.+++++|+.+|+++++||||||.+.++..|||..|+..+|+. ..+|..++++|++
T Consensus 69 ~~~-~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~---~~l~~~~~~~f~~ 144 (285)
T cd07415 69 DTN-YLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGN---ANVWKYCTDLFDY 144 (285)
T ss_pred CCe-EEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCc---hHHHHHHHHHHHH
Confidence 655 999999999999999999999999999999999999999999999999999999999985 2599999999999
Q ss_pred CcceeEeeceEEEEecCCCCCCCCCcccccccccccccccCCCCCHHHHHhhccccccCCCccccccccccCCCCCCCcc
Q 010977 329 LPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLR 408 (496)
Q Consensus 329 LPlaaii~~~il~vHGGI~~s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~~ 408 (496)
||++|+++++++||||||++. +.++++|.++.|+.. ++.++++.|+|||||....+|.
T Consensus 145 lPlaaii~~~i~cvHgGi~p~---------------------~~~~~~i~~i~r~~~-~~~~~~~~dllWsDP~~~~~~~ 202 (285)
T cd07415 145 LPLAALIDNQIFCVHGGLSPS---------------------IDTLDQIRAIDRFQE-VPHEGPMCDLLWSDPDDIEGWG 202 (285)
T ss_pred hHHHhEeCCeEEEEcCCCCCC---------------------cccHHHhhcccCCCC-CCCCCCccceEecCCCccCCCC
Confidence 999999999999999999764 478999999999974 4466788999999999889999
Q ss_pred cccCCCeeeeChhHHHHHHHhcCceEEEeecCCCCCCCCCCccccccCCccccccCCCCeEEEEecCCCCccccCcceeE
Q 010977 409 ENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCT 488 (496)
Q Consensus 409 ~n~RG~g~~FG~d~~~~FL~~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~~~~n~g~~ 488 (496)
+|+||.|+.||++++++||++||+++||||||+ +++||++.| +|+|+|||||||||+..+|.||+
T Consensus 203 ~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~---~~~~~TvfSa~~y~~~~~n~~a~ 267 (285)
T cd07415 203 ISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQL------------VMEGYQWMF---DDKLVTVWSAPNYCYRCGNVASI 267 (285)
T ss_pred cCCCCCccccCHHHHHHHHHHCCCeEEEEcCcc------------ccceEEEec---CCcEEEEecCCcccCCCCceEEE
Confidence 999999999999999999999999999999996 689999987 49999999999999999999999
Q ss_pred EEeee
Q 010977 489 MHSRR 493 (496)
Q Consensus 489 l~~~~ 493 (496)
|.+..
T Consensus 268 l~i~~ 272 (285)
T cd07415 268 MELDE 272 (285)
T ss_pred EEECC
Confidence 99863
No 7
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.6e-65 Score=522.93 Aligned_cols=258 Identities=33% Similarity=0.627 Sum_probs=241.4
Q ss_pred cCCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcH
Q 010977 188 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL 267 (496)
Q Consensus 188 ~~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl 267 (496)
..++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..|+++.+. |||||||||||++|+
T Consensus 30 ~~l~~~~i~~l~~~~~~il~~ep~ll~i~----~~i~vvGDIHG~~~dL~~l~~-~~g~~~~~~-ylfLGDyVDRG~~s~ 103 (320)
T PTZ00480 30 VNLTEAEVRGLCIKARDIFISQPILLELE----APLKICGDVHGQYFDLLRLFE-YGGYPPESN-YLFLGDYVDRGKQSL 103 (320)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCceEecC----CCeEEEeecccCHHHHHHHHH-hcCCCCcce-EEEeceecCCCCCcH
Confidence 36889999999999999999999999997 689999999999999999999 999987665 999999999999999
Q ss_pred HHHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhhhhhhcCCcceeEeeceEEEEecCCC
Q 010977 268 EVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF 347 (496)
Q Consensus 268 EvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI~ 347 (496)
|++.+|+++|+.+|++|++||||||...++..|||..|+..+|+.. +|..++++|++||+||+|++++|||||||+
T Consensus 104 evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~----l~~~~~~~F~~LPlaAiI~~~i~cvHGGI~ 179 (320)
T PTZ00480 104 ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIK----LWKTFTDCFNCLPVAALIDEKILCMHGGLS 179 (320)
T ss_pred HHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHH----HHHHHHHHHHhccHhheecCcEEEEcCCcC
Confidence 9999999999999999999999999999999999999999999754 999999999999999999999999999997
Q ss_pred CCCCCCcccccccccccccccCCCCCHHHHHhhccccccCCCccccccccccCCCCC-CCcccccCCCeeeeChhHHHHH
Q 010977 348 RRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE-AGLRENTKKFGLLWGPDCTEEF 426 (496)
Q Consensus 348 ~s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~~~~l~~DLLWSDP~~~-~g~~~n~RG~g~~FG~d~~~~F 426 (496)
+. +.++++|+++.||.. .++.++++|+|||||... .+|.+|+||.|++||++++++|
T Consensus 180 p~---------------------~~~l~~i~~i~rp~~-~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~F 237 (320)
T PTZ00480 180 PE---------------------LSNLEQIRRIMRPTD-VPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVF 237 (320)
T ss_pred cc---------------------cCCHHHHhcccCCCC-CCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHH
Confidence 63 478999999999974 457788999999999875 7899999999999999999999
Q ss_pred HHhcCceEEEeecCCCCCCCCCCccccccCCccccccCCCCeEEEEecCCCCccccCcceeEEEee
Q 010977 427 LKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSR 492 (496)
Q Consensus 427 L~~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~~~~n~g~~l~~~ 492 (496)
|++||+++||||||+ +++||++.| +++|+|||||||||+..+|.||+|++.
T Consensus 238 l~~n~l~~IiR~Hq~------------v~~G~~~~~---~~~~iTvFSa~~Y~~~~~N~ga~l~i~ 288 (320)
T PTZ00480 238 LKKHELDLICRAHQV------------VEDGYEFFS---KRQLVTLFSAPNYCGEFDNAGSMMTID 288 (320)
T ss_pred HHhCCCcEEEEcCcc------------ccCceEEeC---CCcEEEEeCCcccCCCCCccEEEEEEC
Confidence 999999999999996 689999977 499999999999999999999999875
No 8
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=5.8e-66 Score=527.92 Aligned_cols=260 Identities=37% Similarity=0.643 Sum_probs=244.1
Q ss_pred cCCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHHhcC-CCCCCceEEEecCcccCCCCc
Q 010977 188 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAG-FPSDHRYFVFNGNYVDKGSWG 266 (496)
Q Consensus 188 ~~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g-~p~~~~~~VFLGDyVDRG~~S 266 (496)
..++.+++.+||..+.++|..+|++++++ .||+|||||||||.||+++|. ..| +|+..+ |||||||||||++|
T Consensus 30 ~~l~~~ei~~l~~~~~~if~~~~~l~e~~----aPV~i~GDiHGq~~DLlrlf~-~~g~~pp~~~-ylFLGDYVDRG~~s 103 (331)
T KOG0374|consen 30 VPLSKSEIIKLCDKAREIFLSQPTLLELS----APVKIVGDIHGQFGDLLRLFD-LLGSFPPDQN-YVFLGDYVDRGKQS 103 (331)
T ss_pred eeccHHHHHHHHHHHHHHhcCCCceeecC----CCEEEEccCcCCHHHHHHHHH-hcCCCCCccc-EEEecccccCCccc
Confidence 34889999999999999999999999998 589999999999999999999 999 887666 99999999999999
Q ss_pred HHHHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhhhhhhcCCcceeEeeceEEEEecCC
Q 010977 267 LEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGL 346 (496)
Q Consensus 267 lEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI 346 (496)
+|++.+|+++|+.||++|++||||||.+.+|..|||++||.++|+. ..+|+.|++.|++||++|+|+++++|+|||+
T Consensus 104 lE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~---~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGl 180 (331)
T KOG0374|consen 104 LETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGE---IKLWKAFNDAFNCLPLAALIDGKILCMHGGL 180 (331)
T ss_pred eEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcch---HHHHHHHHHHHhhCchhheecceEEEecCCC
Confidence 9999999999999999999999999999999999999999999984 3599999999999999999999999999999
Q ss_pred CCCCCCCcccccccccccccccCCCCCHHHHHhhccccccCCCccccccccccCCCCC-CCcccccCCCeeeeChhHHHH
Q 010977 347 FRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE-AGLRENTKKFGLLWGPDCTEE 425 (496)
Q Consensus 347 ~~s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~~~~l~~DLLWSDP~~~-~g~~~n~RG~g~~FG~d~~~~ 425 (496)
++ .+.++++|+.+.||. ++++.++++|+|||||... .||.+|.||.++.||++++++
T Consensus 181 sp---------------------~l~~~~~i~~i~rp~-~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~ 238 (331)
T KOG0374|consen 181 SP---------------------HLKSLDQIRAIPRPT-DSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVED 238 (331)
T ss_pred Ch---------------------hhcChHHHhhccCCc-CCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHH
Confidence 76 457899999999994 6678889999999999987 899999999999999999999
Q ss_pred HHHhcCceEEEeecCCCCCCCCCCccccccCCccccccCCCCeEEEEecCCCCccccCcceeEEEeee
Q 010977 426 FLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSRR 493 (496)
Q Consensus 426 FL~~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~~~~n~g~~l~~~~ 493 (496)
||+++++++||||||+ +.+||++. .+++++||||||+||+...|+||+|++.+
T Consensus 239 f~~~~~ldlivRaHqv------------v~dGyeff---a~r~lvTIFSAP~Ycg~~~n~gavm~Vd~ 291 (331)
T KOG0374|consen 239 FCKKLDLDLIVRAHQV------------VEDGYEFF---AGRKLVTIFSAPNYCGEFDNAGAVMRVDK 291 (331)
T ss_pred HHHHhCcceEEEcCcc------------ccccceEe---cCceEEEEecCchhccccCCceEEEEECC
Confidence 9999999999999995 78999984 46899999999999999999999999754
No 9
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=4.6e-65 Score=517.16 Aligned_cols=271 Identities=33% Similarity=0.569 Sum_probs=246.4
Q ss_pred HHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHHhcCCC
Q 010977 168 IQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFP 247 (496)
Q Consensus 168 i~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p 247 (496)
++.+++.++... .++.+++.+||++|+++|++||++++++ .+++|+||||||+.+|.++|+ ..|.+
T Consensus 3 ~~~~~~~~~~~~---------~l~~~~i~~l~~~~~~il~~e~~~~~i~----~~i~vvGDIHG~~~~L~~l~~-~~~~~ 68 (303)
T PTZ00239 3 IDRHIATLLNGG---------CLPERDLKLICERAKEIFLEESNVQPVR----APVNVCGDIHGQFYDLQALFK-EGGDI 68 (303)
T ss_pred HHHHHHHHHccC---------CCCHHHHHHHHHHHHHHHHhCCCeEecC----CCEEEEEeCCCCHHHHHHHHH-hcCCC
Confidence 345666666543 4789999999999999999999999997 679999999999999999999 88887
Q ss_pred CCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhhhhhhc
Q 010977 248 SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFR 327 (496)
Q Consensus 248 ~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~ 327 (496)
+.+. |+|||||||||++|+|++.+|+++|+.+|+++++||||||.+.++..|||..|+..+|+.. .+|+.++++|+
T Consensus 69 ~~~~-~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~---~~~~~~~~~f~ 144 (303)
T PTZ00239 69 PNAN-YIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNS---NPWRLFMDVFD 144 (303)
T ss_pred CCce-EEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcCh---hHHHHHHHHHH
Confidence 6555 9999999999999999999999999999999999999999999999999999999999853 48999999999
Q ss_pred CCcceeEeeceEEEEecCCCCCCCCCcccccccccccccccCCCCCHHHHHhhccccccCCCccccccccccCCCCCCCc
Q 010977 328 TLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGL 407 (496)
Q Consensus 328 ~LPlaaii~~~il~vHGGI~~s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~ 407 (496)
+||++|+++++++||||||++. +.++++|.++.|+.. ++.++.++|+|||||....+|
T Consensus 145 ~LPlaaii~~~i~cvHgGi~p~---------------------~~~l~~i~~i~r~~~-~~~~~~~~dllWsDP~~~~~~ 202 (303)
T PTZ00239 145 CLPLAALIEGQILCVHGGLSPD---------------------MRTIDQIRTIDRKIE-IPHEGPFCDLMWSDPEEVEYW 202 (303)
T ss_pred hCchheEEcCeEEEEcCccCcc---------------------cccHhhhccccCCCC-CCCCCCceeeEecCccccCCC
Confidence 9999999999999999999753 478999999999974 446677899999999988899
Q ss_pred ccccCCCeeeeChhHHHHHHHhcCceEEEeecCCCCCCCCCCccccccCCccccccCCCCeEEEEecCCCCccccCccee
Q 010977 408 RENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGC 487 (496)
Q Consensus 408 ~~n~RG~g~~FG~d~~~~FL~~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~~~~n~g~ 487 (496)
.+|.||.|++||++++++||++||+++||||||+ +++||++.|+ +++|+|||||||||+..+|.||
T Consensus 203 ~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~~--~~~~iTvfSa~~Y~~~~~N~~a 268 (303)
T PTZ00239 203 AVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQL------------VMEGYKYWFP--DQNLVTVWSAPNYCYRCGNIAS 268 (303)
T ss_pred ccCCCCCccccCHHHHHHHHHHCCCcEEEEcChh------------hccceEEEeC--CCeEEEEECCCcccCCCCceEE
Confidence 9999999999999999999999999999999996 6899998653 4669999999999999999999
Q ss_pred EEEee
Q 010977 488 TMHSR 492 (496)
Q Consensus 488 ~l~~~ 492 (496)
+|.+.
T Consensus 269 il~i~ 273 (303)
T PTZ00239 269 ILCLD 273 (303)
T ss_pred EEEEC
Confidence 99874
No 10
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-66 Score=527.63 Aligned_cols=297 Identities=32% Similarity=0.540 Sum_probs=271.4
Q ss_pred cCcccCC--CCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCC
Q 010977 144 ENLTKEQ--DTLPLSWPRNGRISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDS 221 (496)
Q Consensus 144 e~~~~~~--~~~~l~~P~~~~~t~~~i~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~ 221 (496)
+++.+++ +||.+++| +++..+..|+++|+..+ +||+.||+.|+.+|+++|++.||+-+|++..+.
T Consensus 99 ~sidv~d~y~Gp~ls~P----l~~~~i~~lieaFk~kq---------~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~ 165 (631)
T KOG0377|consen 99 TSIDVPDSYNGPKLSLP----LRKNHIDLLIEAFKKKQ---------RLHPKYVLLILREAKKSLKQMPNISRISTSVSQ 165 (631)
T ss_pred cceecCccCCCcccccC----cCchHHHHHHHHHHHhh---------hccHHHHHHHHHHHHHHHHhCCCCCcccccccc
Confidence 5555554 79999999 99999999999999875 689999999999999999999999999998889
Q ss_pred ceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccccccccC
Q 010977 222 EVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYG 301 (496)
Q Consensus 222 ~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~yg 301 (496)
.++||||+||.++||.-||. ++|+|+..++|||+||+||||.+|+|+|..|+++.+.||+.+|+.|||||..+||..||
T Consensus 166 qVTiCGDLHGklDDL~~I~y-KNGlPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYG 244 (631)
T KOG0377|consen 166 QVTICGDLHGKLDDLLVILY-KNGLPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYG 244 (631)
T ss_pred ceEEeccccccccceEEEEe-cCCCCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHh
Confidence 99999999999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHhCcchhhHHHHhhhhhhcCCcceeEeeceEEEEecCCCCCCCCCcccccccccccccccCCCCCHHHHHhhc
Q 010977 302 FWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVN 381 (496)
Q Consensus 302 F~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI~~s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~ 381 (496)
|.+|+..||... ++++.+.+.++|+|||++.+|+.+||++|||++.+.++ +-+.+|.
T Consensus 245 F~kEv~~KYk~~-~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiSd~Tdl----------------------~ll~kIe 301 (631)
T KOG0377|consen 245 FIKEVESKYKRH-GKRILRFLEEVYRWLPIGTIIDSRILVVHGGISDSTDL----------------------DLLDKIE 301 (631)
T ss_pred HHHHHHHHhhhc-ccHHHHHHHHHHHhcchhhhcccceEEEecCcccchhH----------------------HHHhhhh
Confidence 999999999887 88999999999999999999999999999999876543 2222222
Q ss_pred cccc---------------------cCCCccccccccccCCCCCCCccccc-CCCeeeeChhHHHHHHHhcCceEEEeec
Q 010977 382 RFLE---------------------DVPENDLLSDVLWSDPSSEAGLRENT-KKFGLLWGPDCTEEFLKENHLKLIIRSH 439 (496)
Q Consensus 382 R~~~---------------------~p~~~~l~~DLLWSDP~~~~g~~~n~-RG~g~~FG~d~~~~FL~~n~l~~IIRgH 439 (496)
|... ...++..+.|++||||....|+.||. ||.|++||||++..||++++++++||||
T Consensus 302 R~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSH 381 (631)
T KOG0377|consen 302 RGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSH 381 (631)
T ss_pred ccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeec
Confidence 2110 11156788999999999999999999 9999999999999999999999999999
Q ss_pred CCCCCCCCCCccccccCCccccccCCCCeEEEEecCCCCccccCcceeEEEee
Q 010977 440 EGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSR 492 (496)
Q Consensus 440 e~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~~~~n~g~~l~~~ 492 (496)
||+ ++||+++|+ ++|+|||||+||.+..+|.||.+.+.
T Consensus 382 ECK------------peGyEf~Hd---~kvlTiFSASNYYe~GSNrGAYikl~ 419 (631)
T KOG0377|consen 382 ECK------------PEGYEFCHD---NKVLTIFSASNYYEIGSNRGAYIKLG 419 (631)
T ss_pred ccC------------CCcceeeeC---CeEEEEEeccchheecCCCceEEEeC
Confidence 985 899999996 99999999999999999999998764
No 11
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.2e-64 Score=512.41 Aligned_cols=259 Identities=31% Similarity=0.603 Sum_probs=240.9
Q ss_pred ccCCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCc
Q 010977 187 RNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG 266 (496)
Q Consensus 187 ~~~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S 266 (496)
...++.+++.+||.+|+++|++||++++++ .+++||||||||+.+|.++|+ ..++++.+. |+|||||||||++|
T Consensus 22 ~~~i~~~~i~~l~~~~~~il~~e~~ll~i~----~p~~ViGDIHG~~~~L~~l~~-~~~~~~~~~-~lfLGDyVDRG~~s 95 (294)
T PTZ00244 22 QILIREEDIRAVLTEVREIFMSQPMLLEIR----PPVRVCGDTHGQYYDLLRIFE-KCGFPPYSN-YLFLGDYVDRGKHS 95 (294)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhCCCeEecc----CCceeeccCCCCHHHHHHHHH-HcCCCCccc-EEEeeeEecCCCCH
Confidence 346889999999999999999999999997 579999999999999999999 899987665 99999999999999
Q ss_pred HHHHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhhhhhhcCCcceeEeeceEEEEecCC
Q 010977 267 LEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGL 346 (496)
Q Consensus 267 lEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI 346 (496)
+||+.+++++|+.+|.+++++|||||...++..|||..|+..+|+. .+|..++++|++||++++++++++|||||+
T Consensus 96 ~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~----~l~~~~~~~f~~lPlaaii~~~il~vHgGi 171 (294)
T PTZ00244 96 VETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNI----KLFKAFTDVFNTMPVCCVISEKIICMHGGL 171 (294)
T ss_pred HHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhH----HHHHHHHHHHHhCchheEecCeeEEEcCCC
Confidence 9999999999999999999999999999999999999999999975 499999999999999999999999999999
Q ss_pred CCCCCCCcccccccccccccccCCCCCHHHHHhhccccccCCCccccccccccCCCCC-CCcccccCCCeeeeChhHHHH
Q 010977 347 FRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE-AGLRENTKKFGLLWGPDCTEE 425 (496)
Q Consensus 347 ~~s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~~~~l~~DLLWSDP~~~-~g~~~n~RG~g~~FG~d~~~~ 425 (496)
++. +.++++++.+.|+.. +++.++++|+|||||... .+|.+|+||.|++||++++++
T Consensus 172 ~p~---------------------~~~l~~i~~i~rp~~-~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~ 229 (294)
T PTZ00244 172 SPD---------------------LTSLASVNEIERPCD-VPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVND 229 (294)
T ss_pred Cch---------------------hhHHHHhhhhccccC-CCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHH
Confidence 763 367999999999974 557788999999999875 799999999999999999999
Q ss_pred HHHhcCceEEEeecCCCCCCCCCCccccccCCccccccCCCCeEEEEecCCCCccccCcceeEEEee
Q 010977 426 FLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSR 492 (496)
Q Consensus 426 FL~~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~~~~n~g~~l~~~ 492 (496)
||++||+++||||||+ +++||++.| +++|+|||||||||+..+|.||+|.+.
T Consensus 230 Fl~~n~l~~iiR~Hq~------------~~~G~~~~~---~~~~iTvfSa~~Y~~~~~N~~a~l~i~ 281 (294)
T PTZ00244 230 FLDMVDMDLIVRAHQV------------MERGYGFFA---SRQLVTVFSAPNYCGEFDNDAAVMNID 281 (294)
T ss_pred HHHHcCCcEEEEcCcc------------ccCceEEcC---CCeEEEEeCCccccCCCCceEEEEEEC
Confidence 9999999999999996 689999977 599999999999999999999999875
No 12
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=2.4e-64 Score=513.09 Aligned_cols=272 Identities=35% Similarity=0.610 Sum_probs=243.7
Q ss_pred HHHHHHHhhhcCCCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHHhcCCC
Q 010977 168 IQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFP 247 (496)
Q Consensus 168 i~~l~~~~~~~~~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p 247 (496)
++.|++.|...+ .|+.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..|.+
T Consensus 3 ~~~~~~~~~~~~---------~l~~~~i~~l~~~~~~il~~e~~l~~i~----~~i~ViGDIHG~~~dL~~l~~-~~g~~ 68 (305)
T cd07416 3 IDVLKAHFMREG---------RLSEEDALRIITEGAEILRQEPNLLRIE----APVTVCGDIHGQFYDLLKLFE-VGGSP 68 (305)
T ss_pred HHHHHHHHHcCC---------CCCHHHHHHHHHHHHHHHHhCCCeEccC----CCEEEEEeCCCCHHHHHHHHH-hcCCC
Confidence 345667776554 4789999999999999999999999997 689999999999999999999 99988
Q ss_pred CCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhhhhhhc
Q 010977 248 SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFR 327 (496)
Q Consensus 248 ~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~ 327 (496)
+.+. |||||||||||++|+||+.+|+++|+.+|++|++||||||.+.++..|||..|+..+|+. .+|..++++|+
T Consensus 69 ~~~~-ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~----~l~~~~~~~f~ 143 (305)
T cd07416 69 ANTR-YLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMEAFD 143 (305)
T ss_pred CCce-EEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccH----HHHHHHHHHHh
Confidence 7655 999999999999999999999999999999999999999999999999999999999965 49999999999
Q ss_pred CCcceeEeeceEEEEecCCCCCCCCCcccccccccccccccCCCCCHHHHHhhccccccCCCccccccccccCCCCCC--
Q 010977 328 TLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEA-- 405 (496)
Q Consensus 328 ~LPlaaii~~~il~vHGGI~~s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~-- 405 (496)
+||++++++++++||||||++. +.++++|.++.|+.. ++..++++|+|||||....
T Consensus 144 ~LPlaaii~~~i~~vHGGi~p~---------------------~~~l~~i~~i~r~~~-~~~~~~~~dllWsDP~~~~~~ 201 (305)
T cd07416 144 CLPLAALMNQQFLCVHGGLSPE---------------------LKTLDDIRKLDRFRE-PPAFGPMCDLLWSDPLEDFGN 201 (305)
T ss_pred hccceeEEcCCEEEEcCCCCcc---------------------cccHHHhcccCCCCC-CCCCCcceeeeecCccccccc
Confidence 9999999999999999999753 478999999999874 4567789999999998652
Q ss_pred -----Ccccc-cCCCeeeeChhHHHHHHHhcCceEEEeecCCCCCCCCCCccccccCCccccccC---CCCeEEEEecCC
Q 010977 406 -----GLREN-TKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDT---VSGELYTLFTAP 476 (496)
Q Consensus 406 -----g~~~n-~RG~g~~FG~d~~~~FL~~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~---~~gkviTVFSAp 476 (496)
+|.+| .||.|+.||++++++||++||+++||||||+ +++||++.|+. ..++|+||||||
T Consensus 202 ~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~~~~~~~~~~~iTvFSa~ 269 (305)
T cd07416 202 EKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEA------------QDAGYRMYRKSQTTGFPSLITIFSAP 269 (305)
T ss_pred ccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEeccc------------cccceEEecCCCcCCCCcEEEEeCCc
Confidence 47776 5999999999999999999999999999996 67999997741 113999999999
Q ss_pred CCccccCcceeEEEee
Q 010977 477 NYPQVQILLGCTMHSR 492 (496)
Q Consensus 477 nY~~~~~n~g~~l~~~ 492 (496)
|||+..+|.||+|.+.
T Consensus 270 ~Y~~~~~N~~a~l~i~ 285 (305)
T cd07416 270 NYLDVYNNKAAVLKYE 285 (305)
T ss_pred cccCCCCceEEEEEEc
Confidence 9999999999999874
No 13
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=1.7e-64 Score=511.50 Aligned_cols=259 Identities=34% Similarity=0.644 Sum_probs=241.2
Q ss_pred cCCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcH
Q 010977 188 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL 267 (496)
Q Consensus 188 ~~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl 267 (496)
..++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..|+++.+. |||||||||||++|+
T Consensus 21 ~~~~~~~i~~l~~~~~~il~~ep~~l~i~----~~i~viGDIHG~~~~L~~l~~-~~~~~~~~~-~lfLGDyVDRG~~s~ 94 (293)
T cd07414 21 VQLTEAEIRGLCLKSREIFLSQPILLELE----APLKICGDIHGQYYDLLRLFE-YGGFPPESN-YLFLGDYVDRGKQSL 94 (293)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCeEecC----CceEEEEecCCCHHHHHHHHH-hcCCCCcce-EEEEeeEecCCCCcH
Confidence 36889999999999999999999999997 589999999999999999999 999987655 999999999999999
Q ss_pred HHHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhhhhhhcCCcceeEeeceEEEEecCCC
Q 010977 268 EVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF 347 (496)
Q Consensus 268 EvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI~ 347 (496)
|++.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+.. +|..++++|++||++|+++++++|||||++
T Consensus 95 e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~----l~~~~~~~f~~lPlaa~i~~~i~cvHgGi~ 170 (293)
T cd07414 95 ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIK----LWKTFTDCFNCLPVAAIIDEKIFCMHGGLS 170 (293)
T ss_pred HHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHH----HHHHHHHHHHHhHHHHhhCCcEEEEccCCC
Confidence 9999999999999999999999999999999999999999999754 999999999999999999999999999997
Q ss_pred CCCCCCcccccccccccccccCCCCCHHHHHhhccccccCCCccccccccccCCCCC-CCcccccCCCeeeeChhHHHHH
Q 010977 348 RRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE-AGLRENTKKFGLLWGPDCTEEF 426 (496)
Q Consensus 348 ~s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~~~~l~~DLLWSDP~~~-~g~~~n~RG~g~~FG~d~~~~F 426 (496)
+. +.++++|+++.|+.. .+..++++|+|||||... .+|.+|+||.|+.||++++++|
T Consensus 171 p~---------------------~~~l~~i~~i~r~~~-~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~F 228 (293)
T cd07414 171 PD---------------------LQSMEQIRRIMRPTD-VPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKF 228 (293)
T ss_pred cc---------------------cCcHHHHhcccCCCC-CCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHH
Confidence 63 478999999999874 456788999999999875 7899999999999999999999
Q ss_pred HHhcCceEEEeecCCCCCCCCCCccccccCCccccccCCCCeEEEEecCCCCccccCcceeEEEeee
Q 010977 427 LKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSRR 493 (496)
Q Consensus 427 L~~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~~~~n~g~~l~~~~ 493 (496)
|++||+++||||||+ +++||++.| +++|+|||||||||+..+|.||+|++..
T Consensus 229 l~~n~l~~iiR~He~------------~~~G~~~~~---~~~~iTvfSa~~Y~~~~~N~~a~l~i~~ 280 (293)
T cd07414 229 LNKHDLDLICRAHQV------------VEDGYEFFA---KRQLVTLFSAPNYCGEFDNAGAMMSVDE 280 (293)
T ss_pred HHHcCCeEEEECCcc------------ccCeEEEeC---CCcEEEEecCCcccCCCCceEEEEEECC
Confidence 999999999999996 689999976 4999999999999999999999998853
No 14
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-65 Score=482.62 Aligned_cols=259 Identities=34% Similarity=0.567 Sum_probs=241.5
Q ss_pred cCCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcH
Q 010977 188 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL 267 (496)
Q Consensus 188 ~~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl 267 (496)
+.||++++..||+-++++|..|.|++.++ .|++|||||||||+||+++|+ ..|.-+.++ |||+|||||||.+|+
T Consensus 17 kyLpE~elk~LCe~v~d~L~eEsNvqPV~----tPVTvCGDIHGQFyDL~eLFr-tgG~vP~tn-YiFmGDfVDRGyySL 90 (306)
T KOG0373|consen 17 KYLPENELKRLCEMVKDILMEESNVQPVS----TPVTVCGDIHGQFYDLLELFR-TGGQVPDTN-YIFMGDFVDRGYYSL 90 (306)
T ss_pred CCCCHHHHHHHHHHHHHHHhhhcCccccC----CCeeEeeccchhHHHHHHHHH-hcCCCCCcc-eEEeccccccccccH
Confidence 36899999999999999999999999998 689999999999999999999 877777666 999999999999999
Q ss_pred HHHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhhhhhhcCCcceeEeeceEEEEecCCC
Q 010977 268 EVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF 347 (496)
Q Consensus 268 EvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI~ 347 (496)
|++.+|+.||..||.+|.+||||||++.+++.|||++||..|||.. ..|+.+.++|+.|++||+|+++++|||||++
T Consensus 91 EtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGna---n~wkycckVFD~LtlaAiID~~vLCVHGGLS 167 (306)
T KOG0373|consen 91 ETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNA---NVWKYCCKVFDFLTLAAIIDEKVLCVHGGLS 167 (306)
T ss_pred HHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCc---hHHHHHHHHHhhhhHHHHhcCcEEEEcCCCC
Confidence 9999999999999999999999999999999999999999999976 7999999999999999999999999999996
Q ss_pred CCCCCCcccccccccccccccCCCCCHHHHHhhccccccCCCccccccccccCCCCCCCcccccCCCeeeeChhHHHHHH
Q 010977 348 RRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFL 427 (496)
Q Consensus 348 ~s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~~~n~RG~g~~FG~d~~~~FL 427 (496)
| ++.++|+|+-+.|..+.| ..+..||++||||..-..|..|+||+|++||.+++.+|.
T Consensus 168 P---------------------dirtlDqir~i~R~qEiP-h~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~ 225 (306)
T KOG0373|consen 168 P---------------------DIRTLDQIRLIERNQEIP-HEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFN 225 (306)
T ss_pred c---------------------cceeHHHHHhHHhhccCC-CCCCccceeccChhhhhhheeCCCCcceeechhhhHHHH
Confidence 5 458999999999998766 456789999999999999999999999999999999999
Q ss_pred HhcCceEEEeecCCCCCCCCCCccccccCCccccccCCCCeEEEEecCCCCccccCcceeEEEe
Q 010977 428 KENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHS 491 (496)
Q Consensus 428 ~~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~~~~n~g~~l~~ 491 (496)
..|++++|.|+||. +++||++.++ ...++|||||||||..-.|.+.+|..
T Consensus 226 ~iN~L~LicRaHQL------------V~EG~KymF~--eK~lvTVWSAPNYCYRCGNvAsi~~~ 275 (306)
T KOG0373|consen 226 HINNLNLICRAHQL------------VQEGFKYMFD--EKGLVTVWSAPNYCYRCGNVASIMSF 275 (306)
T ss_pred hccchHHHHhHHHH------------HHhhHHhccC--CCCEEEEecCCchhhhccCeeeEEEe
Confidence 99999999999994 7899999764 34499999999999998888888865
No 15
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=1.8e-63 Score=499.21 Aligned_cols=256 Identities=40% Similarity=0.704 Sum_probs=237.9
Q ss_pred CHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHH
Q 010977 191 PVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVL 270 (496)
Q Consensus 191 ~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL 270 (496)
+++++.+||++|+++|++||++++++ ++++||||||||+.+|.++|+ ..|+++.+. |||||||||||++|+|++
T Consensus 2 ~~~~i~~l~~~~~~il~~e~~~~~i~----~~i~vvGDiHG~~~~l~~ll~-~~~~~~~~~-~vfLGD~VDrG~~s~e~l 75 (271)
T smart00156 2 YAEEILELLREVKEIFRQEPNLVEVS----APVTVCGDIHGQFDDLLRLFD-LNGPPPDTN-YVFLGDYVDRGPFSIEVI 75 (271)
T ss_pred CHHHHHHHHHHHHHHHHhCCCeEEeC----CCEEEEEeCcCCHHHHHHHHH-HcCCCCCce-EEEeCCccCCCCChHHHH
Confidence 57899999999999999999999997 689999999999999999999 888876555 999999999999999999
Q ss_pred HHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhhhhhhcCCcceeEeeceEEEEecCCCCCC
Q 010977 271 LVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRT 350 (496)
Q Consensus 271 ~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI~~s~ 350 (496)
.+++++|+.+|+++++||||||.+.++..|||..|+..+|+. .+|+.+.++|++||++++++++++|||||+++.
T Consensus 76 ~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~----~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~- 150 (271)
T smart00156 76 LLLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGE----EIYEKFQEAFSWLPLAALIDNKILCMHGGLSPD- 150 (271)
T ss_pred HHHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCH----HHHHHHHHHHhhChhheEEcCeEEEEecCCCCc-
Confidence 999999999999999999999999999999999999999975 499999999999999999999999999999763
Q ss_pred CCCcccccccccccccccCCCCCHHHHHhhccccccCCCccccccccccCCCC-CCCcccccCCCeeeeChhHHHHHHHh
Q 010977 351 CSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSS-EAGLRENTKKFGLLWGPDCTEEFLKE 429 (496)
Q Consensus 351 ~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~~~~l~~DLLWSDP~~-~~g~~~n~RG~g~~FG~d~~~~FL~~ 429 (496)
+.++++|+++.|+. +++.+++++|+|||||.. ..+|.+|.||.|+.||++++++||++
T Consensus 151 --------------------~~~l~~i~~i~r~~-~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~ 209 (271)
T smart00156 151 --------------------LTTLDDIRKLKRPQ-EPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKK 209 (271)
T ss_pred --------------------cCCHHHHhcccCCC-CCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHH
Confidence 47899999999997 455778899999999964 48999999999999999999999999
Q ss_pred cCceEEEeecCCCCCCCCCCccccccCCccccccCCCCeEEEEecCCCCccccCcceeEEEeee
Q 010977 430 NHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSRR 493 (496)
Q Consensus 430 n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~~~~n~g~~l~~~~ 493 (496)
||+++||||||+ +++||++.| +|+|+|||||||||+..+|.||++.+..
T Consensus 210 n~l~~iiR~He~------------~~~G~~~~~---~~~~~TvfSa~~y~~~~~n~~a~~~i~~ 258 (271)
T smart00156 210 NNLKLIIRAHQV------------VDDGYEFFH---DRKLVTIFSAPNYCGRFGNKAAVLKVDK 258 (271)
T ss_pred CCCeEEEecCcc------------cCCcEEEec---CCcEEEEECCcccccCCCceEEEEEECC
Confidence 999999999996 579999987 4999999999999999999999998853
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.4e-64 Score=507.25 Aligned_cols=260 Identities=35% Similarity=0.631 Sum_probs=236.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHH
Q 010977 189 VMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLE 268 (496)
Q Consensus 189 ~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlE 268 (496)
.|.++.++.|+.++..+|++|+++++++ +||+|||||||||.||+++|+ ..|.|..++ |+|||||||||.+|+|
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~----APiTVCGDIHGQf~DLmKLFE-VGG~PA~t~-YLFLGDYVDRGyFSiE 133 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVE----APITVCGDIHGQFFDLMKLFE-VGGSPANTR-YLFLGDYVDRGYFSIE 133 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEecc----CCeeEecccchHHHHHHHHHH-ccCCcccce-eEeeccccccceeeee
Confidence 3778999999999999999999999998 789999999999999999999 877776665 9999999999999999
Q ss_pred HHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhhhhhhcCCcceeEeeceEEEEecCCCC
Q 010977 269 VLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFR 348 (496)
Q Consensus 269 vL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI~~ 348 (496)
|+++|++||+.||..+++||||||++.++..+.|..||..||... +|+++++.|++|||||++++.+||||||++|
T Consensus 134 CvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~----vYdaCmesFd~LPLAAlmNqQflCVHGGlSP 209 (517)
T KOG0375|consen 134 CVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSER----VYDACMESFDCLPLAALMNQQFLCVHGGLSP 209 (517)
T ss_pred hHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHH----HHHHHHHHhccchHHHHhcCceEEecCCCCc
Confidence 999999999999999999999999999999999999999999876 9999999999999999999999999999965
Q ss_pred CCCCCcccccccccccccccCCCCCHHHHHhhccccccCCCccccccccccCCCCC-------CCccccc-CCCeeeeCh
Q 010977 349 RTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE-------AGLRENT-KKFGLLWGP 420 (496)
Q Consensus 349 s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~~~~l~~DLLWSDP~~~-------~g~~~n~-RG~g~~FG~ 420 (496)
++.+++||++++|+. +||..+.+||||||||.+. ..|.+|. ||+++.|..
T Consensus 210 ---------------------Ei~tl~DIr~l~RF~-EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy 267 (517)
T KOG0375|consen 210 ---------------------EIHTLDDIRKLDRFK-EPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSY 267 (517)
T ss_pred ---------------------ccccHHHHHhhhhcc-CCCccCcchhhhccChhhhccccccccccccCccccccceech
Confidence 569999999999998 5778999999999999875 4577888 999999999
Q ss_pred hHHHHHHHhcCceEEEeecCCCCCCCCCCccccccCCccccccCCCCeEEEEecCCCCccccCcceeEE
Q 010977 421 DCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTM 489 (496)
Q Consensus 421 d~~~~FL~~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~~~~n~g~~l 489 (496)
.++.+||+.||+-.|||+||.+|+++. -|+-+.-...+.+|||||||||.|+.+|.+|+|
T Consensus 268 ~A~C~FLq~nnLLSIiRAHEAQDaGYR---------MYrksqttGFPSLiTiFSAPNYLDvYnNKAAvL 327 (517)
T KOG0375|consen 268 PAVCEFLQNNNLLSIIRAHEAQDAGYR---------MYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVL 327 (517)
T ss_pred HHHHHHHHhCCchhhhhhhhhhhhhhh---------hhhcccccCCchheeeecCCchhhhhccHHHHh
Confidence 999999999999999999999877653 022222234578999999999999998888764
No 17
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=5.8e-62 Score=497.00 Aligned_cols=270 Identities=36% Similarity=0.616 Sum_probs=244.1
Q ss_pred CcccccCCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHHhcCCCCC-------CceEEE
Q 010977 183 PKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSD-------HRYFVF 255 (496)
Q Consensus 183 ~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p~~-------~~~~VF 255 (496)
+...+..++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..|+|+. +..|||
T Consensus 14 ~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~----~~~~viGDIHG~~~~L~~ll~-~~g~~~~~~~~~~~~~~~vf 88 (311)
T cd07419 14 PTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLR----APIKIFGDIHGQFGDLMRLFD-EYGSPVTEAAGDIEYIDYLF 88 (311)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeC----CCEEEEEeccCCHHHHHHHHH-HcCCCcccccCCCcCceEEE
Confidence 3444567899999999999999999999999997 589999999999999999999 8888764 246999
Q ss_pred ecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcc--hhhHHHHhhhhhhcCCccee
Q 010977 256 NGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKK--DCKLVFDKCLECFRTLPLAT 333 (496)
Q Consensus 256 LGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~--~~~~l~~~~~~~f~~LPlaa 333 (496)
||||||||++|+||+.+|+++|+.+|++|++||||||.+.++..|||..++..+|+.. .+..+|..+.++|++||+++
T Consensus 89 LGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~a 168 (311)
T cd07419 89 LGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAA 168 (311)
T ss_pred ECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhh
Confidence 9999999999999999999999999999999999999999999999999999999862 24579999999999999999
Q ss_pred EeeceEEEEecCCCCCCCCCcccccccccccccccCCCCCHHHHHhhccccccCCCccccccccccCCCCC---CCcccc
Q 010977 334 IIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE---AGLREN 410 (496)
Q Consensus 334 ii~~~il~vHGGI~~s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~~~~l~~DLLWSDP~~~---~g~~~n 410 (496)
+++++++|||||+++. +.++++|..+.|+...+....+++|+|||||... .++.+|
T Consensus 169 vi~~~~l~vHgGi~p~---------------------~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~ 227 (311)
T cd07419 169 IIEDKILCMHGGIGRS---------------------INHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPN 227 (311)
T ss_pred eecccEEEEccCCCCC---------------------CCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccC
Confidence 9999999999999764 4789999999999755566788999999999975 477777
Q ss_pred c---CCCe--eeeChhHHHHHHHhcCceEEEeecCCCCCCCCCCccccccCCccccccCCCCeEEEEecCCCCccccCcc
Q 010977 411 T---KKFG--LLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILL 485 (496)
Q Consensus 411 ~---RG~g--~~FG~d~~~~FL~~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~~~~n~ 485 (496)
. ||.| +.||++++++||++||+++||||||+ +++||++.| +|+|+|||||||||+..+|.
T Consensus 228 ~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~iiRgHe~------------~~~G~~~~~---~~~~iTvfSa~~y~~~~~n~ 292 (311)
T cd07419 228 AIDPRGPGLIVKFGPDRVHRFLEENDLQMIIRAHEC------------VMDGFERFA---QGKLITLFSATNYCGTAGNA 292 (311)
T ss_pred CCCCCCCCcceeECHHHHHHHHHHCCCeEEEEechh------------hhCCeEEeC---CCeEEEEecCCcccCCCCce
Confidence 6 9998 69999999999999999999999996 689999977 49999999999999999999
Q ss_pred eeEEEeee
Q 010977 486 GCTMHSRR 493 (496)
Q Consensus 486 g~~l~~~~ 493 (496)
||++.+.+
T Consensus 293 ~ai~~i~~ 300 (311)
T cd07419 293 GAILVLGR 300 (311)
T ss_pred EEEEEECC
Confidence 99999864
No 18
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=3e-59 Score=452.97 Aligned_cols=257 Identities=34% Similarity=0.589 Sum_probs=238.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHH
Q 010977 189 VMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLE 268 (496)
Q Consensus 189 ~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlE 268 (496)
.+++..+..+|+.|+++|.+|.++..+. .+++||||+||||++|+++|+ +.|..+..+ |+|+|||||||++|+|
T Consensus 32 ~lse~~v~~lc~~a~~~L~~e~nV~~v~----~pvtvcGDvHGqf~dl~ELfk-iGG~~pdtn-ylfmGDyvdrGy~Sve 105 (319)
T KOG0371|consen 32 PLSEVDVSSLCLLAKEILDKEENVQPVN----CPVTVCGDVHGQFHDLIELFK-IGGLAPDTN-YLFMGDYVDRGYYSVE 105 (319)
T ss_pred CCccccchhHHHHHHHHHhccccccccc----cceEEecCcchhHHHHHHHHH-ccCCCCCcc-eeeeeeecccccchHH
Confidence 5678888899999999999999999998 689999999999999999999 777776666 9999999999999999
Q ss_pred HHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhhhhhhcCCcceeEeeceEEEEecCCCC
Q 010977 269 VLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFR 348 (496)
Q Consensus 269 vL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI~~ 348 (496)
++.+|.++|+.||++|.+||||||++.++..|||++||.+|||.. .+|+.|.+.|+++|+.|+|++++||.|||++|
T Consensus 106 tVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~a---nvw~~Ftdlfdy~P~tali~~~ifc~HGgLsp 182 (319)
T KOG0371|consen 106 TVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDLFDYLPLTALIESKIFCLHGGLSP 182 (319)
T ss_pred HHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccc---cchHHhhhhhhccchHhhhccceeeccCCcCc
Confidence 999999999999999999999999999999999999999999876 69999999999999999999999999999977
Q ss_pred CCCCCcccccccccccccccCCCCCHHHHHhhccccccCCCccccccccccCCCCCCCcccccCCCeeeeChhHHHHHHH
Q 010977 349 RTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLK 428 (496)
Q Consensus 349 s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~~~n~RG~g~~FG~d~~~~FL~ 428 (496)
+ +.+++.++.++|..+.| -++-+||||||||+...||..++||+|+.||.+..++|-.
T Consensus 183 s---------------------i~tld~~r~~dr~~evp-hegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~ 240 (319)
T KOG0371|consen 183 S---------------------IDTLDLIRLLDRIQEVP-HEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNH 240 (319)
T ss_pred c---------------------cchHHHHHHHHHhhccc-CCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhc
Confidence 4 47899999999966544 5567899999999999999999999999999999999999
Q ss_pred hcCceEEEeecCCCCCCCCCCccccccCCccccccCCCCeEEEEecCCCCccccCcceeEEEe
Q 010977 429 ENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHS 491 (496)
Q Consensus 429 ~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~~~~n~g~~l~~ 491 (496)
+||+++|-|+||. +++||.|.|+ ..++|+|||||||.--.|.++++..
T Consensus 241 ~n~lslisRahql------------vm~g~nW~~~---~~~vtiFSapnycYrcgn~a~i~e~ 288 (319)
T KOG0371|consen 241 KNGLSLISRAHQL------------VMEGYNWYHL---WNVVTIFSAPNYCYRCGNQAAIMER 288 (319)
T ss_pred cCCchHhHHHHHH------------Hhcccceeee---cceeEEccCCchhhccccHHHHhhh
Confidence 9999999999994 7899999996 7788999999999988888777654
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=99.98 E-value=1.3e-31 Score=258.47 Aligned_cols=216 Identities=38% Similarity=0.580 Sum_probs=164.8
Q ss_pred EEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccccccccCch
Q 010977 224 IVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFW 303 (496)
Q Consensus 224 ~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~ 303 (496)
+|||||||++.+|.++++ ..+.++. +.+||+|||||||+.+.+++.+++.++.. |.++++|+||||.+.++..+++.
T Consensus 1 ~~igDiHg~~~~l~~~l~-~~~~~~~-d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~ 77 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLE-KIGFPPN-DKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFY 77 (225)
T ss_pred CEEeCCCCCHHHHHHHHH-HhCCCCC-CEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCc
Confidence 589999999999999999 8887554 55999999999999999999999999877 88999999999999887766655
Q ss_pred HHHH-----HHhCcchhhHHHHhhhhhhcCCcceeEeec-eEEEEecCCCCCCCCCcccccccccccccccCCCCCHHHH
Q 010977 304 AELC-----TKFGKKDCKLVFDKCLECFRTLPLATIIAQ-GVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREF 377 (496)
Q Consensus 304 ~e~~-----~ky~~~~~~~l~~~~~~~f~~LPlaaii~~-~il~vHGGI~~s~~~~~~~~~~~~k~~~~~~~~l~slddI 377 (496)
.+.. ..........++..+.+++..||+++.++. +++|||||+++.. ....+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~---------------------~~~~~~ 136 (225)
T cd00144 78 DEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGL---------------------PLEEQI 136 (225)
T ss_pred chhhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCcc---------------------chHHhh
Confidence 4321 001111234688889999999999999976 9999999996642 111111
Q ss_pred HhhccccccCCCccccccccccCCCCCCCccc-ccCCCeeeeChhHHHHHHHhcCceEEEeecCCCCCCCCCCccccccC
Q 010977 378 AKVNRFLEDVPENDLLSDVLWSDPSSEAGLRE-NTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLN 456 (496)
Q Consensus 378 ~~i~R~~~~p~~~~l~~DLLWSDP~~~~g~~~-n~RG~g~~FG~d~~~~FL~~n~l~~IIRgHe~~d~~~~r~~~~~v~~ 456 (496)
. ..+......+++|++|........ +.++. |+++.+.|++.++.+.|||||++ +..
T Consensus 137 ~-------~~~~~~~~~~~lw~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~------------~~~ 193 (225)
T cd00144 137 K-------EEPEDQLPEDLLWSDPLELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTP------------VEE 193 (225)
T ss_pred h-------cCcccccceeeeecCCCCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCcc------------ccC
Confidence 1 112345678999999986644333 23444 99999999999999999999997 355
Q ss_pred CccccccCCCCeEEEEecCCCCccccCcceeEE
Q 010977 457 GYSKDHDTVSGELYTLFTAPNYPQVQILLGCTM 489 (496)
Q Consensus 457 Gy~~~h~~~~gkviTVFSApnY~~~~~n~g~~l 489 (496)
|+...+ .++++||+|++.|++...+.++.+
T Consensus 194 ~~~~~~---~~~~i~IDtg~~~~~~~~~~l~~~ 223 (225)
T cd00144 194 GYEFGH---DGNLITIDSGCNYCGGGGNKLAAL 223 (225)
T ss_pred ccEEcC---CCCEEEEecCCcccCCCCccEEEE
Confidence 654322 489999999999987766655544
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.91 E-value=5.5e-24 Score=210.67 Aligned_cols=126 Identities=21% Similarity=0.414 Sum_probs=98.0
Q ss_pred CceEEEccCcCcHHHHHHHHHHhcCCC--------CCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCc
Q 010977 221 SEVIVVGDILGQFHDLVALFEENAGFP--------SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (496)
Q Consensus 221 ~~i~VVGDIHG~~~dL~~il~~~~g~p--------~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE 292 (496)
++++||||||||++.|.++++ ..++. ++++++||+||||||||+|.|||.+++.+. .+.++++||||||
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~-~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE 77 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTE-KLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHC 77 (245)
T ss_pred CceEEEEECccCHHHHHHHHH-HcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccH
Confidence 468999999999999999999 87764 345679999999999999999999998884 5568999999999
Q ss_pred ccccccccC-------chHHHHHHhCcc---hhhHHHHhhhhhhcCCcceeEee-ceEEEEecCCCCC
Q 010977 293 TKNCTLAYG-------FWAELCTKFGKK---DCKLVFDKCLECFRTLPLATIIA-QGVYTTHGGLFRR 349 (496)
Q Consensus 293 ~~~ln~~yg-------F~~e~~~ky~~~---~~~~l~~~~~~~f~~LPlaaii~-~~il~vHGGI~~s 349 (496)
.++++...+ ...+....|... ....+++.+.++|++||++..++ ++++|||||+.+.
T Consensus 78 ~~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~ 145 (245)
T PRK13625 78 NKLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQD 145 (245)
T ss_pred HHHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChH
Confidence 987653221 112233344321 12357788999999999988774 6799999999653
No 21
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.89 E-value=1.6e-22 Score=198.47 Aligned_cols=123 Identities=23% Similarity=0.402 Sum_probs=97.0
Q ss_pred CceEEEccCcCcHHHHHHHHHHhcCCCCC---------CceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCC
Q 010977 221 SEVIVVGDILGQFHDLVALFEENAGFPSD---------HRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 291 (496)
Q Consensus 221 ~~i~VVGDIHG~~~dL~~il~~~~g~p~~---------~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNH 291 (496)
+++.||||||||+..|.++|+ .+++... .++++|||||||||++|.||+.+|..++. +.++++++|||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~-~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNH 77 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLE-KLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNH 77 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHH-HcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCc
Confidence 479999999999999999999 8776532 35799999999999999999999998864 35799999999
Q ss_pred cccccccc--------cCchHHHHHHhCcchhhHHHHhhhhhhcCCcceeEee-ceEEEEecCCCC
Q 010977 292 ETKNCTLA--------YGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIA-QGVYTTHGGLFR 348 (496)
Q Consensus 292 E~~~ln~~--------ygF~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~-~~il~vHGGI~~ 348 (496)
|.+.++.. .|+. +....|... ...+.+.+.+||+.||+...++ ++++|||||+++
T Consensus 78 E~~l~~~~~~~~~~~~~~~~-~t~~~~~~~-~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~ 141 (234)
T cd07423 78 DNKLYRKLQGRNVKITHGLE-ETVAQLEAE-SEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKE 141 (234)
T ss_pred HHHHHHHhcCCCccccCccc-chHHHHhhc-cHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCCh
Confidence 99876532 2222 222333322 2457788999999999988775 579999999864
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.88 E-value=8e-22 Score=192.66 Aligned_cols=118 Identities=26% Similarity=0.340 Sum_probs=90.7
Q ss_pred EEEccCcCcHHHHHHHHHHhcCCC-------CCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCccccc
Q 010977 224 IVVGDILGQFHDLVALFEENAGFP-------SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNC 296 (496)
Q Consensus 224 ~VVGDIHG~~~dL~~il~~~~g~p-------~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~l 296 (496)
+||||||||++.|.++++ ..++. +..+.+|||||||||||+|.||+.+|+.++ .+.++++|+||||.+++
T Consensus 2 ~vIGDIHG~~~~L~~lL~-~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll 78 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLH-KLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAI 78 (222)
T ss_pred EEEEeccCCHHHHHHHHH-HcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHH
Confidence 799999999999999999 77664 234579999999999999999999999885 34589999999999876
Q ss_pred ccccCc-----------------hHHHHHHhCcchhhHHHHhhhhhhcCCcceeEeeceEEEEecCCC
Q 010977 297 TLAYGF-----------------WAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF 347 (496)
Q Consensus 297 n~~ygF-----------------~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI~ 347 (496)
....+- ..+..+.++. ..+.++.+.+||+.||+.... +++++||||+.
T Consensus 79 ~~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 79 AWHTKDPSGGEWLRAHSKKNLRQHQAFLEQFRE--HSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred HhhhCCcccchhhhcCCCcccccHHHHHHHHhc--cchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 422110 0122223321 234568889999999997765 68999999983
No 23
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.87 E-value=5.1e-22 Score=192.34 Aligned_cols=121 Identities=22% Similarity=0.336 Sum_probs=89.7
Q ss_pred EEEccCcCcHHHHHHHHHHhcCC-------CCCCceEEEecCcccCCCCcHHHHHHHHHhhhh---CCCceEEeccCCcc
Q 010977 224 IVVGDILGQFHDLVALFEENAGF-------PSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVL---MPHRVYLLRGNHET 293 (496)
Q Consensus 224 ~VVGDIHG~~~dL~~il~~~~g~-------p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~---~P~~V~lLRGNHE~ 293 (496)
+||||||||+..|.++++ .++. ....+.+||+|||||||+++.+|+.+|+.++.. .+.++++|+||||.
T Consensus 1 ~vi~DIHG~~~~l~~ll~-~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~ 79 (208)
T cd07425 1 VAIGDLHGDLDAFREILK-GAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHEL 79 (208)
T ss_pred CEEeCccCCHHHHHHHHH-HCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcH
Confidence 589999999999999999 7764 234567999999999999999999999998754 45789999999999
Q ss_pred cccccccCch--HHHHHHhCc-chhhHHH---HhhhhhhcCCcceeEeeceEEEEecCC
Q 010977 294 KNCTLAYGFW--AELCTKFGK-KDCKLVF---DKCLECFRTLPLATIIAQGVYTTHGGL 346 (496)
Q Consensus 294 ~~ln~~ygF~--~e~~~ky~~-~~~~~l~---~~~~~~f~~LPlaaii~~~il~vHGGI 346 (496)
+.++..+.+. .+....... .....++ ..+.+|++.+|+...++ ++++||||+
T Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~ 137 (208)
T cd07425 80 MNLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGL 137 (208)
T ss_pred HHHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCc
Confidence 9886443322 111111110 0011122 24478999999987774 688899998
No 24
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.87 E-value=3e-22 Score=199.85 Aligned_cols=119 Identities=23% Similarity=0.323 Sum_probs=95.7
Q ss_pred eEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccccccccCc
Q 010977 223 VIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGF 302 (496)
Q Consensus 223 i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF 302 (496)
++||||||||+..|.++++ .+++.+..+.++|+||||||||+|+||+.+|..++ +++++++||||.+.++..+|+
T Consensus 1 ~yvIGDIHG~~~~L~~LL~-~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~ 75 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLE-KINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGI 75 (257)
T ss_pred CEEEECCCCCHHHHHHHHH-hcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCc
Confidence 4899999999999999999 88887666779999999999999999999999875 489999999999988766664
Q ss_pred hHH----HHHHhCcchhhHHHHhhhhhhcCCcceeEeec-eEEEEecCCCCC
Q 010977 303 WAE----LCTKFGKKDCKLVFDKCLECFRTLPLATIIAQ-GVYTTHGGLFRR 349 (496)
Q Consensus 303 ~~e----~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~-~il~vHGGI~~s 349 (496)
... ....+- .....+.+.+|++.+|++..+++ ++++|||||+|.
T Consensus 76 ~~~~~~~t~~~~l---~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~ 124 (257)
T cd07422 76 KKPKKKDTLDDIL---NAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQ 124 (257)
T ss_pred cccccHhHHHHHH---hccchHHHHHHHHhCCCEEEECCccEEEEccCCCCC
Confidence 311 111110 11234678899999999887764 899999999764
No 25
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.87 E-value=1.1e-21 Score=197.77 Aligned_cols=121 Identities=23% Similarity=0.319 Sum_probs=95.9
Q ss_pred CceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCccccccccc
Q 010977 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAY 300 (496)
Q Consensus 221 ~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~y 300 (496)
++++||||||||+..|.++++ ..++.+..+.++|+||||||||+|.||+.++..+ +.++++++||||.+.+...+
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~-~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~ 75 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLE-KIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAA 75 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHH-hcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhc
Confidence 468999999999999999999 8887655667999999999999999999999876 34799999999998877666
Q ss_pred CchHH----HHHHhCcchhhHHHHhhhhhhcCCcceeEe-eceEEEEecCCCCC
Q 010977 301 GFWAE----LCTKFGKKDCKLVFDKCLECFRTLPLATII-AQGVYTTHGGLFRR 349 (496)
Q Consensus 301 gF~~e----~~~ky~~~~~~~l~~~~~~~f~~LPlaaii-~~~il~vHGGI~~s 349 (496)
|+... ....+- .....+.+.+|++.+|+...+ .+++++||||+++.
T Consensus 76 g~~~~~~~~~l~~~l---~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~ 126 (275)
T PRK00166 76 GIKRNKKKDTLDPIL---EAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQ 126 (275)
T ss_pred CCccccchhHHHHHH---ccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCC
Confidence 64311 111111 112456688999999997776 57899999999764
No 26
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.87 E-value=1.3e-21 Score=190.35 Aligned_cols=127 Identities=21% Similarity=0.253 Sum_probs=93.0
Q ss_pred eeccCCCCceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcc
Q 010977 214 KLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHET 293 (496)
Q Consensus 214 ~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~ 293 (496)
.++....++++||||||||+..|+++|+ .+++.+..+.++|+||||||||+|.|||.+|.. + +++.|+||||.
T Consensus 10 ~~~~~~~~ri~vigDIHG~~~~L~~lL~-~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~-----~-~~~~v~GNHE~ 82 (218)
T PRK11439 10 RIAGHQWRHIWLVGDIHGCFEQLMRKLR-HCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE-----H-WVRAVRGNHEQ 82 (218)
T ss_pred cccCCCCCeEEEEEcccCCHHHHHHHHH-hcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc-----C-CceEeeCchHH
Confidence 4444445699999999999999999999 887765566799999999999999999999853 2 68899999999
Q ss_pred cccccccCchHHHHHHhCc-------chhhHHHHhhhhhhcCCcceeEee---ceEEEEecCCC
Q 010977 294 KNCTLAYGFWAELCTKFGK-------KDCKLVFDKCLECFRTLPLATIIA---QGVYTTHGGLF 347 (496)
Q Consensus 294 ~~ln~~ygF~~e~~~ky~~-------~~~~~l~~~~~~~f~~LPlaaii~---~~il~vHGGI~ 347 (496)
++++...+-....+...|. ....+.+..+.++++.||+...+. +++++||||++
T Consensus 83 ~~l~~~~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 83 MALDALASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred HHHHHHHCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 8875322110011111110 012234566779999999987653 57999999984
No 27
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.87 E-value=4.1e-22 Score=200.20 Aligned_cols=120 Identities=24% Similarity=0.339 Sum_probs=97.7
Q ss_pred CceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCccccccccc
Q 010977 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAY 300 (496)
Q Consensus 221 ~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~y 300 (496)
+.++||||||||++.|.++|+ .+++.+..+.++|+||+|||||+|+||+.++.++. +++++++||||.+.++..+
T Consensus 1 m~~YvIGDIHGc~daL~~LL~-~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~ 75 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLE-RVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFA 75 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHH-HhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhc
Confidence 468999999999999999999 88887666779999999999999999999998763 4788999999999888777
Q ss_pred CchH-----HHHHHhCcchhhHHHHhhhhhhcCCcceeEee-ceEEEEecCCCCC
Q 010977 301 GFWA-----ELCTKFGKKDCKLVFDKCLECFRTLPLATIIA-QGVYTTHGGLFRR 349 (496)
Q Consensus 301 gF~~-----e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~-~~il~vHGGI~~s 349 (496)
|+.. .....+ .....+.+.+|++.+|+..... .++++|||||+|.
T Consensus 76 g~~~~~~~d~l~~~l----~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~ 126 (279)
T TIGR00668 76 GISRNKPKDRLDPLL----EAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQ 126 (279)
T ss_pred CCCccCchHHHHHHH----HccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCC
Confidence 7521 122212 2235678899999999976654 4699999999775
No 28
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.86 E-value=7.9e-21 Score=183.06 Aligned_cols=122 Identities=24% Similarity=0.242 Sum_probs=94.8
Q ss_pred CceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCccccccccc
Q 010977 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAY 300 (496)
Q Consensus 221 ~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~y 300 (496)
++++|+|||||++..|.++++ ..++....+.++|+|||||||+++.|++.+|.. .++++++||||.+.+....
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~-~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~ 73 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALD-AVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALR 73 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHH-HcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhh
Confidence 479999999999999999999 777755566699999999999999999998854 2689999999999887554
Q ss_pred C--chHHHHHHhCcch-----hhHHHHhhhhhhcCCcceeEee---ceEEEEecCCCCC
Q 010977 301 G--FWAELCTKFGKKD-----CKLVFDKCLECFRTLPLATIIA---QGVYTTHGGLFRR 349 (496)
Q Consensus 301 g--F~~e~~~ky~~~~-----~~~l~~~~~~~f~~LPlaaii~---~~il~vHGGI~~s 349 (496)
+ +..+.+.+++... ...+++...+||+.||+...+. .++++||||+++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~ 132 (207)
T cd07424 74 AEPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSD 132 (207)
T ss_pred CCCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcc
Confidence 4 2333333333321 1225666888999999988775 4799999998543
No 29
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.83 E-value=4.2e-20 Score=186.44 Aligned_cols=74 Identities=31% Similarity=0.415 Sum_probs=63.2
Q ss_pred ceEEEccCcCcHHHHHHHHHHhcCC-----CCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCC-ceEEeccCCcccc
Q 010977 222 EVIVVGDILGQFHDLVALFEENAGF-----PSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPH-RVYLLRGNHETKN 295 (496)
Q Consensus 222 ~i~VVGDIHG~~~dL~~il~~~~g~-----p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~-~V~lLRGNHE~~~ 295 (496)
++++||||||+++.|.++|+ .... +.....+||||||||||++|.+|+.+|.+++..+|. ++++|+||||.++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~-~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWL-NLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred eEEEEEeccCCHHHHHHHHH-HhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 69999999999999999998 4321 123446999999999999999999999999988876 6889999999776
Q ss_pred c
Q 010977 296 C 296 (496)
Q Consensus 296 l 296 (496)
+
T Consensus 82 l 82 (304)
T cd07421 82 A 82 (304)
T ss_pred H
Confidence 4
No 30
>PHA02239 putative protein phosphatase
Probab=99.83 E-value=3.8e-20 Score=182.62 Aligned_cols=125 Identities=19% Similarity=0.258 Sum_probs=91.6
Q ss_pred CceEEEccCcCcHHHHHHHHHHhcCCC-CCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccccccc
Q 010977 221 SEVIVVGDILGQFHDLVALFEENAGFP-SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLA 299 (496)
Q Consensus 221 ~~i~VVGDIHG~~~dL~~il~~~~g~p-~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ 299 (496)
+++++||||||++..|.++++ ..... ...+.+||+|||||||+.|.+++..++.+.. .+.++++|+||||.+++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~-~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~ 78 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMD-KINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIM 78 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHH-HHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHH
Confidence 478999999999999999999 55322 2235599999999999999999999988753 45689999999999865421
Q ss_pred c-----Cc---------hHHHHHHhCcchh---------------------------hHHHHhhhhhhcCCcceeEeece
Q 010977 300 Y-----GF---------WAELCTKFGKKDC---------------------------KLVFDKCLECFRTLPLATIIAQG 338 (496)
Q Consensus 300 y-----gF---------~~e~~~ky~~~~~---------------------------~~l~~~~~~~f~~LPlaaii~~~ 338 (496)
. +. ..+....||.... ...+..+..|++.||+.... ++
T Consensus 79 ~~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~ 157 (235)
T PHA02239 79 ENVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DK 157 (235)
T ss_pred hCchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CC
Confidence 1 00 1234456643211 11345667799999997665 68
Q ss_pred EEEEecCCCC
Q 010977 339 VYTTHGGLFR 348 (496)
Q Consensus 339 il~vHGGI~~ 348 (496)
+++||||+.+
T Consensus 158 ~ifVHAGi~p 167 (235)
T PHA02239 158 YIFSHSGGVS 167 (235)
T ss_pred EEEEeCCCCC
Confidence 9999999954
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.82 E-value=6.5e-20 Score=178.75 Aligned_cols=130 Identities=22% Similarity=0.247 Sum_probs=91.5
Q ss_pred eeeeccCCCCceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCC
Q 010977 212 CVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 291 (496)
Q Consensus 212 lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNH 291 (496)
+..+.....++++||||||||+..|+++++ ...+....+.++|+|||||||++|.||+.+|.. + +++.+||||
T Consensus 6 ~~~~~~~~~~ri~visDiHg~~~~l~~~l~-~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~-----~-~~~~v~GNH 78 (218)
T PRK09968 6 YQKINAHHYRHIWVVGDIHGEYQLLQSRLH-QLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ-----P-WFISVKGNH 78 (218)
T ss_pred eeeccCCCCCeEEEEEeccCCHHHHHHHHH-hcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh-----C-CcEEEECch
Confidence 334444344699999999999999999999 777655566799999999999999999998853 2 688999999
Q ss_pred cccccccccCchHHHHHHhCcc-------hhhHHHHhhhhhhcCCcceeEee---ceEEEEecCCCC
Q 010977 292 ETKNCTLAYGFWAELCTKFGKK-------DCKLVFDKCLECFRTLPLATIIA---QGVYTTHGGLFR 348 (496)
Q Consensus 292 E~~~ln~~ygF~~e~~~ky~~~-------~~~~l~~~~~~~f~~LPlaaii~---~~il~vHGGI~~ 348 (496)
|.+++....+-....+...+.. ...........+++.||+...+. .++++||||++.
T Consensus 79 E~~~~~~~~~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p~ 145 (218)
T PRK09968 79 EAMALDAFETGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYPG 145 (218)
T ss_pred HHHHHHHHhcCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCCC
Confidence 9987753211000111111110 01123344567899999987664 468999999843
No 32
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=99.62 E-value=1.1e-15 Score=130.80 Aligned_cols=93 Identities=20% Similarity=0.344 Sum_probs=67.7
Q ss_pred HHHHhhhhhhhhhhhHHhhhhhhhhhhhccchhhhhccCCCccCcccCC--CCCCCCCCCCCCCCHHHHHHHHHHhhhcC
Q 010977 102 LRSACNIVSKQRVFDSSLQGLLEELQVEVGSTMRERLVGGKLENLTKEQ--DTLPLSWPRNGRISLEWIQLLISTFKWSS 179 (496)
Q Consensus 102 ~~~~c~~i~~~~~fe~ai~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~--~~~~l~~P~~~~~t~~~i~~l~~~~~~~~ 179 (496)
|..+|.|++|+++||+||+++ +.+.++.+++ |+++|.+++ +||+++ ++.+|.+|+++|+++||.++
T Consensus 1 Kl~ec~k~ir~~~FekAI~~d--~~~~s~~e~~-------d~~~i~Ve~sY~GP~l~---~~~it~efv~~mie~FK~~K 68 (95)
T PF08321_consen 1 KLKECEKLIRRIAFEKAIAVD--EEKKSVSESI-------DLESIDVEDSYDGPRLE---DEPITLEFVKAMIEWFKNQK 68 (95)
T ss_dssp HHHHHHHHHHHHHHSHHHHHH--HHHHSTTTS--------TTSTT---SS--SS--B---TTB--HHHHHHHHHHHHCT-
T ss_pred CHHHHHHHHHHHHHHHHhccC--CcccCHHHhc-------CccceecCCCCCCCCCC---CCCCCHHHHHHHHHHHHhCC
Confidence 468999999999999999993 3334454444 788888775 799994 45699999999999999876
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHHHHHhcCCeeee
Q 010977 180 WKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKL 215 (496)
Q Consensus 180 ~~~~~~~~~~l~~~~v~~Ll~~a~~il~~ep~lv~i 215 (496)
.||..++.+|+.++.++|+++||+++|
T Consensus 69 ---------~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 69 ---------KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp ------------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred ---------CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 589999999999999999999999986
No 33
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.21 E-value=7.9e-11 Score=102.78 Aligned_cols=76 Identities=20% Similarity=0.326 Sum_probs=56.5
Q ss_pred ceEEEccCcCcHHHH---HHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHH--HHhhhhCCCceEEeccCCccccc
Q 010977 222 EVIVVGDILGQFHDL---VALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVL--LAWKVLMPHRVYLLRGNHETKNC 296 (496)
Q Consensus 222 ~i~VVGDIHG~~~dL---~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL--~~LK~~~P~~V~lLRGNHE~~~l 296 (496)
+|.++||+|+..... ...+. ........+.+|++||++|+|..+.+..... ...+...+..+++++||||....
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~-~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLD-EIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHH-HHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred eEEEEcCCCCCCcchhHHHHHHH-HHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 689999999999987 34333 2222333455999999999999988877765 45555677789999999999875
Q ss_pred cc
Q 010977 297 TL 298 (496)
Q Consensus 297 n~ 298 (496)
..
T Consensus 81 ~~ 82 (200)
T PF00149_consen 81 NS 82 (200)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 34
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=99.16 E-value=1.5e-12 Score=137.60 Aligned_cols=287 Identities=17% Similarity=0.018 Sum_probs=208.1
Q ss_pred ccCCCHHHHHHHHHHHHHHHHhcCCeeeeccCCCCceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCc
Q 010977 187 RNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG 266 (496)
Q Consensus 187 ~~~l~~~~v~~Ll~~a~~il~~ep~lv~i~~~~~~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S 266 (496)
.+.+...++..++.-+.+++..+||+..+......-.+.++|.||++.|+.+.++ .- |.....|++-|++++++.+.
T Consensus 12 n~~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie-~d--P~~~K~Y~rrg~a~m~l~~~ 88 (476)
T KOG0376|consen 12 NEALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIE-LD--PTYIKAYVRRGTAVMALGEF 88 (476)
T ss_pred hhhcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhh-cC--chhhheeeeccHHHHhHHHH
Confidence 3456778888999999999999999999865333558899999999999999999 43 66677899999999999999
Q ss_pred HHHHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhhhhhhcCCcceeEeeceEEEEecCC
Q 010977 267 LEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGL 346 (496)
Q Consensus 267 lEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI 346 (496)
.+.+..+...+...|+...+.|++||+..+...++|..++...++.. +..++..+...+.. |++....+.++=-| -+
T Consensus 89 ~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~-~s~~~~~~~~~~~~-~i~~~y~g~~le~~-kv 165 (476)
T KOG0376|consen 89 KKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDK-KSVVEMKIDEEDMD-LIESDYSGPVLEDH-KV 165 (476)
T ss_pred HHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCC-cccccccccccccc-ccccccCCcccccc-hh
Confidence 99999999999999999999999999999999999999988888654 33333333322222 13333333332111 11
Q ss_pred CCCCCCCcccccccccccccccCCCCCHHHHHhhccccccCC-CccccccccccCCCCCCCccccc-CCCeeeeChhHHH
Q 010977 347 FRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVP-ENDLLSDVLWSDPSSEAGLRENT-KKFGLLWGPDCTE 424 (496)
Q Consensus 347 ~~s~~~~~~~~~~~~k~~~~~~~~l~slddI~~i~R~~~~p~-~~~l~~DLLWSDP~~~~g~~~n~-RG~g~~FG~d~~~ 424 (496)
.... + ...+...+...........++.+.....+..+++. +-..-.+..|++|....|...+. ++.+..++|+.+.
T Consensus 166 t~e~-v-k~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~ 243 (476)
T KOG0376|consen 166 TLEF-V-KTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETN 243 (476)
T ss_pred hHHH-H-HHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcc
Confidence 0000 0 00000000000111112233333322222222222 22366788999999888877776 9999999999999
Q ss_pred HHHHhcCceEEEeecCCCCCCCCCCccccccCCccccccCCCCeEEEEecCCCCccc
Q 010977 425 EFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQV 481 (496)
Q Consensus 425 ~FL~~n~l~~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~~ 481 (496)
.||...++..+++.|..+....++-++..++.+|...|+..++.+.++|+++.+|..
T Consensus 244 ~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~ 300 (476)
T KOG0376|consen 244 PYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKA 300 (476)
T ss_pred cccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhh
Confidence 999999999999999998888888898889999999888888999999999999865
No 35
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.86 E-value=2.5e-08 Score=90.97 Aligned_cols=60 Identities=20% Similarity=0.241 Sum_probs=47.6
Q ss_pred ceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccc
Q 010977 222 EVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (496)
Q Consensus 222 ~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ 295 (496)
++.++||+||+...+.++++ .... .+.++++||++++|..+. + .....+++++||||...
T Consensus 1 ~i~~isD~H~~~~~~~~~~~-~~~~---~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~ 60 (155)
T cd00841 1 KIGVISDTHGSLELLEKALE-LFGD---VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEV 60 (155)
T ss_pred CEEEEecCCCCHHHHHHHHH-HhcC---CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcC
Confidence 47899999999999999998 5543 345999999999998765 1 22346999999999753
No 36
>PRK09453 phosphodiesterase; Provisional
Probab=98.81 E-value=1.5e-08 Score=95.79 Aligned_cols=69 Identities=17% Similarity=0.273 Sum_probs=52.1
Q ss_pred CceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCC--------cHHHHHHHHHhhhhCCCceEEeccCCc
Q 010977 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSW--------GLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (496)
Q Consensus 221 ~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~--------SlEvL~lL~~LK~~~P~~V~lLRGNHE 292 (496)
+++.|++|+||++..+.++++ ...... .+.++++||++|+|+. +.+++..|..+ ...+++++||||
T Consensus 1 mri~viSD~Hg~~~~~~~~l~-~~~~~~-~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD 74 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALE-LFAQSG-ADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCD 74 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHH-HHHhcC-CCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCc
Confidence 478999999999999999888 553333 3459999999999873 45566655432 236999999999
Q ss_pred ccc
Q 010977 293 TKN 295 (496)
Q Consensus 293 ~~~ 295 (496)
...
T Consensus 75 ~~~ 77 (182)
T PRK09453 75 SEV 77 (182)
T ss_pred chh
Confidence 643
No 37
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.72 E-value=1.3e-07 Score=87.19 Aligned_cols=64 Identities=19% Similarity=0.265 Sum_probs=47.6
Q ss_pred CceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCccc
Q 010977 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (496)
Q Consensus 221 ~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~ 294 (496)
+++.|++|+||++..+..+++ .....+..+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~-~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVE-LFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHH-HHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 478999999999988777666 544432345599999998 457777665432 2599999999973
No 38
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.70 E-value=2.2e-08 Score=88.01 Aligned_cols=146 Identities=31% Similarity=0.395 Sum_probs=109.4
Q ss_pred cccccCchHHHHHHhCcchhhHHHHh---hhhhhcCCcceeEeec-eEEEEecCCCCCCCCCcccccccccccccccCCC
Q 010977 296 CTLAYGFWAELCTKFGKKDCKLVFDK---CLECFRTLPLATIIAQ-GVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSL 371 (496)
Q Consensus 296 ln~~ygF~~e~~~ky~~~~~~~l~~~---~~~~f~~LPlaaii~~-~il~vHGGI~~s~~~~~~~~~~~~k~~~~~~~~l 371 (496)
++..+|+..++...++.. ..|.. +.++|+.+|++++++. .++|.|||+++.. .
T Consensus 3 l~~~~~~~~~~~~~~~~~---~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~--------------------~ 59 (155)
T COG0639 3 LTALYGFYDEKLRKYGEE---LEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGL--------------------D 59 (155)
T ss_pred hhhhhchhHHhhhhcCCc---eeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcch--------------------h
Confidence 445678888877777642 23444 9999999999999988 8999999997642 1
Q ss_pred CCHHHHHhhccccc-cCCCccccccccccCCCC--CCCcccccCCCeeeeChhHHHHHHHhcCceEEEeecCCCCCCCCC
Q 010977 372 GSLREFAKVNRFLE-DVPENDLLSDVLWSDPSS--EAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGA 448 (496)
Q Consensus 372 ~slddI~~i~R~~~-~p~~~~l~~DLLWSDP~~--~~g~~~n~RG~g~~FG~d~~~~FL~~n~l~~IIRgHe~~d~~~~r 448 (496)
..++++..+.|... .....+...+.+|++|.. ...|.++.+|.+..| ++.+..|+..+..+.+.++|..
T Consensus 60 ~~~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~------- 131 (155)
T COG0639 60 RLLDIIEVLDRLRACEVPHAGHTHDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVL------- 131 (155)
T ss_pred hhHHHHHHHhhhhcccCCCccccccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEE-------
Confidence 45666666666431 223445666779999986 588999999998877 8899999988888889999995
Q ss_pred CccccccCCccccccCCCCeEEEEecCCCCcc
Q 010977 449 DDARNMLNGYSKDHDTVSGELYTLFTAPNYPQ 480 (496)
Q Consensus 449 ~~~~~v~~Gy~~~h~~~~gkviTVFSApnY~~ 480 (496)
+..++...+ .+..+|.||+++|+.
T Consensus 132 -----~~~d~~~~~---~~~~lt~~~~~~~~~ 155 (155)
T COG0639 132 -----YDIDTGAVF---GGGLLTAFSAPNYCY 155 (155)
T ss_pred -----EecCceEEe---CCCeeeEEecccccC
Confidence 455666544 129999999999973
No 39
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.58 E-value=1.9e-07 Score=84.18 Aligned_cols=61 Identities=30% Similarity=0.522 Sum_probs=44.1
Q ss_pred CceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccc
Q 010977 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (496)
Q Consensus 221 ~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ 295 (496)
+++.++||+|++...+.++++ .+. +.+.++++||++|+ .+++..+..+ .++.++||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~-~~~---~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLE-YIN---EPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHH-HHT---TESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHH-Hhc---CCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCccccc
Confidence 579999999999999999999 662 24559999999993 6666666433 6999999999654
No 40
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.42 E-value=2.8e-06 Score=76.19 Aligned_cols=61 Identities=16% Similarity=0.353 Sum_probs=39.9
Q ss_pred ceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcH--HHHHHHHHhhhhCCCceEEeccCCccc
Q 010977 222 EVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL--EVLLVLLAWKVLMPHRVYLLRGNHETK 294 (496)
Q Consensus 222 ~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl--EvL~lL~~LK~~~P~~V~lLRGNHE~~ 294 (496)
++.++||+||++. .+. . ...+.++++||++++|..+- +.+.++..++ .| .+++++||||..
T Consensus 1 ~i~~isD~H~~~~----~~~----~-~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~ 63 (135)
T cd07379 1 RFVCISDTHSRHR----TIS----I-PDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLT 63 (135)
T ss_pred CEEEEeCCCCCCC----cCc----C-CCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCc
Confidence 4789999999977 222 1 23455999999999986532 2333333221 22 367899999953
No 41
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.35 E-value=1.7e-06 Score=86.04 Aligned_cols=112 Identities=14% Similarity=0.183 Sum_probs=72.6
Q ss_pred ceEEEccCcCcHHHHH-HHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccccccc-
Q 010977 222 EVIVVGDILGQFHDLV-ALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLA- 299 (496)
Q Consensus 222 ~i~VVGDIHG~~~dL~-~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~- 299 (496)
++.++|||||++.... ..++ .. +.+.++++||+++. +.+++..|..+ |..++.++||||.......
T Consensus 2 rIa~isDiHg~~~~~~~~~l~-~~----~pD~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~ 69 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALH-LL----QPDLVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYDATFR 69 (238)
T ss_pred EEEEEecCCCCchHHHHHHHh-cc----CCCEEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCccccccccc
Confidence 6899999999987642 2333 22 12459999999864 56776766544 3358999999998553200
Q ss_pred --c-----------------C------------------------chH-HHHHHhCcchhhHHHHhhhhhhcCCcceeEe
Q 010977 300 --Y-----------------G------------------------FWA-ELCTKFGKKDCKLVFDKCLECFRTLPLATII 335 (496)
Q Consensus 300 --y-----------------g------------------------F~~-e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii 335 (496)
+ + +.. ++...|+.. ...+++..+++.++.+.-.
T Consensus 70 ~k~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~---s~~eA~~~ive~~~~~~~~ 146 (238)
T cd07397 70 KKGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVI---SLEESAQRIIAAAKKAPPD 146 (238)
T ss_pred chHHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCC---CHHHHHHHHHHHhhhcCCC
Confidence 0 0 112 466666532 4666777778888643333
Q ss_pred eceEEEEecCCCC
Q 010977 336 AQGVYTTHGGLFR 348 (496)
Q Consensus 336 ~~~il~vHGGI~~ 348 (496)
...||+.|+|+.-
T Consensus 147 ~~~VliaH~~~~G 159 (238)
T cd07397 147 LPLILLAHNGPSG 159 (238)
T ss_pred CCeEEEeCcCCcC
Confidence 4589999999843
No 42
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.34 E-value=3.9e-06 Score=71.74 Aligned_cols=67 Identities=31% Similarity=0.467 Sum_probs=48.9
Q ss_pred EEEccCcCcHHHHHHHH--HHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCc
Q 010977 224 IVVGDILGQFHDLVALF--EENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (496)
Q Consensus 224 ~VVGDIHG~~~dL~~il--~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE 292 (496)
+++||+|+......... . ... ....+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~-~~~-~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAA-LAA-AEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHH-Hhc-ccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 37899999999887765 2 112 2233559999999999998877666533333355567999999999
No 43
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.28 E-value=1.1e-05 Score=75.09 Aligned_cols=65 Identities=20% Similarity=0.258 Sum_probs=44.4
Q ss_pred eEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCc-HHHHHHHHHhhhhCCCceEEeccCCcccc
Q 010977 223 VIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-LEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (496)
Q Consensus 223 i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S-lEvL~lL~~LK~~~P~~V~lLRGNHE~~~ 295 (496)
|.++||+||++..+.. . ..... ..+.+|+.||++++|... .+.+..|. ..+-.++.++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~-~~~~~-~~D~vv~~GDl~~~~~~~~~~~~~~l~----~~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--I-ILKAE-EADAVIVAGDITNFGGKEAAVEINLLL----AIGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--H-Hhhcc-CCCEEEECCCccCcCCHHHHHHHHHHH----hcCCCEEEEcCCCCCHH
Confidence 5789999999998876 2 22222 234599999999999763 33332222 23445999999999743
No 44
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.19 E-value=3.4e-06 Score=83.15 Aligned_cols=71 Identities=14% Similarity=0.127 Sum_probs=54.9
Q ss_pred CceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCccc
Q 010977 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (496)
Q Consensus 221 ~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~ 294 (496)
.++.+++|+||++..|.++++ ....... +.+|++||++++|+..-++..++-.+... +..++.++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~-~~~~~~~-D~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVG-LAPETGA-DAIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHH-HHhhcCC-CEEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 689999999999999999998 5533333 45999999999997666666666555432 23699999999975
No 45
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.08 E-value=3.5e-05 Score=73.18 Aligned_cols=58 Identities=22% Similarity=0.332 Sum_probs=40.5
Q ss_pred ceEEEccCc-CcHH-----HHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcc
Q 010977 222 EVIVVGDIL-GQFH-----DLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHET 293 (496)
Q Consensus 222 ~i~VVGDIH-G~~~-----dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~ 293 (496)
+|.|++|+| |+-. .+.++++ . ..-+.++.+||+++ .+++.++..+. + .++.++||||.
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~-~----~~~d~iih~GDi~~-----~~~~~~l~~~~---~-~~~~V~GN~D~ 64 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLV-P----GKIQHVLCTGNLCS-----KETYDYLKTIA---P-DVHIVRGDFDE 64 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhc-c----CCCCEEEECCCCCC-----HHHHHHHHhhC---C-ceEEEECCCCc
Confidence 378999999 5533 3555555 2 22345999999986 67777665442 2 59999999996
No 46
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=97.81 E-value=7e-05 Score=74.00 Aligned_cols=70 Identities=11% Similarity=0.199 Sum_probs=46.4
Q ss_pred CceEEEccCcCcH------HHHHHHHHHhcCCCCCCceEEEecCcccC-------CCCcHHHHHHHHHhhhhCCCceEEe
Q 010977 221 SEVIVVGDILGQF------HDLVALFEENAGFPSDHRYFVFNGNYVDK-------GSWGLEVLLVLLAWKVLMPHRVYLL 287 (496)
Q Consensus 221 ~~i~VVGDIHG~~------~dL~~il~~~~g~p~~~~~~VFLGDyVDR-------G~~SlEvL~lL~~LK~~~P~~V~lL 287 (496)
+++++++|+|... ..+.+.++ .. ....+.++++||++|. .+...+++.+|..++. .+-.++++
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~-~~--~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v 76 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLR-GE--ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFM 76 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHH-hh--hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEE
Confidence 4789999999542 23555554 22 1233559999999985 2334566667766653 22469999
Q ss_pred ccCCccc
Q 010977 288 RGNHETK 294 (496)
Q Consensus 288 RGNHE~~ 294 (496)
+||||..
T Consensus 77 ~GNHD~~ 83 (241)
T PRK05340 77 HGNRDFL 83 (241)
T ss_pred eCCCchh
Confidence 9999964
No 47
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=97.77 E-value=2.3e-05 Score=72.50 Aligned_cols=68 Identities=22% Similarity=0.123 Sum_probs=46.3
Q ss_pred eEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCccc
Q 010977 223 VIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (496)
Q Consensus 223 i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~ 294 (496)
+.+++|+|+....+...+...... .+.+.++++||+++++..+.... ++.. ...+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~-~~~d~li~~GDi~~~~~~~~~~~-~~~~--~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIA-PDADILVLAGDIGYLTDAPRFAP-LLLA--LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCC-CCCCEEEECCCCCCCcchHHHHH-HHHh--hcCCccEEEeCCCcceE
Confidence 468999999987776655202222 33455999999999987765543 2222 23445799999999986
No 48
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=97.72 E-value=5.5e-05 Score=72.77 Aligned_cols=71 Identities=25% Similarity=0.250 Sum_probs=49.0
Q ss_pred CceEEEccCcCcHH----HHHHHHHHhcCCCCCCceEEEecCcccCCCCcH-HHHHHHHHhhhhCCCceEEeccCCcccc
Q 010977 221 SEVIVVGDILGQFH----DLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-EVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (496)
Q Consensus 221 ~~i~VVGDIHG~~~----dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-EvL~lL~~LK~~~P~~V~lLRGNHE~~~ 295 (496)
.++.+++|+|+... .+.++++ ...... .+.+++.||++|.+.... +...++..++ .+..++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~-~~~~~~-~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVE-KINALK-PDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHH-HHhccC-CCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 57999999998743 5666666 433222 345999999999988765 4444444332 3446999999999754
No 49
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.71 E-value=0.00028 Score=63.40 Aligned_cols=55 Identities=20% Similarity=0.238 Sum_probs=38.2
Q ss_pred EEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCc
Q 010977 225 VVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (496)
Q Consensus 225 VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE 292 (496)
|++|+||....+.++.. . .. .-+.++++||+. .+++..+..+ ....++.++||||
T Consensus 2 viSDtH~~~~~~~~~~~-~--~~-~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D 56 (129)
T cd07403 2 VISDTESPALYSPEIKV-R--LE-GVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD 56 (129)
T ss_pred eeccccCccccchHHHh-h--CC-CCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc
Confidence 79999999777777666 3 22 234599999984 3445555443 1224899999999
No 50
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=97.69 E-value=9.4e-05 Score=72.69 Aligned_cols=67 Identities=12% Similarity=0.125 Sum_probs=41.5
Q ss_pred EEEccCcCcH------HHHHHHHHHhcCCCCCCceEEEecCcccCC-----CC--cHHHHHHHHHhhhhCCCceEEeccC
Q 010977 224 IVVGDILGQF------HDLVALFEENAGFPSDHRYFVFNGNYVDKG-----SW--GLEVLLVLLAWKVLMPHRVYLLRGN 290 (496)
Q Consensus 224 ~VVGDIHG~~------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG-----~~--SlEvL~lL~~LK~~~P~~V~lLRGN 290 (496)
++++|+|... ..+.+.+.+... ..+.++++||++|.. +. ..++...|..|+. .+..++++.||
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~---~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GN 77 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEAR---KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGN 77 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhc---cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCC
Confidence 6899999542 234455541222 334599999999952 11 1244555555543 24479999999
Q ss_pred Cccc
Q 010977 291 HETK 294 (496)
Q Consensus 291 HE~~ 294 (496)
||..
T Consensus 78 HD~~ 81 (231)
T TIGR01854 78 RDFL 81 (231)
T ss_pred Cchh
Confidence 9964
No 51
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=97.67 E-value=0.00066 Score=60.96 Aligned_cols=42 Identities=24% Similarity=0.343 Sum_probs=27.3
Q ss_pred ceEEEecCcccCCCCc-HH-HHHHHHHhhhhCCCceEEeccCCcc
Q 010977 251 RYFVFNGNYVDKGSWG-LE-VLLVLLAWKVLMPHRVYLLRGNHET 293 (496)
Q Consensus 251 ~~~VFLGDyVDRG~~S-lE-vL~lL~~LK~~~P~~V~lLRGNHE~ 293 (496)
+.++++||+++.|... .+ ...++-.++... ..+++++||||.
T Consensus 37 d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD~ 80 (144)
T cd07400 37 DLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHDV 80 (144)
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCeE
Confidence 4499999999998752 22 223333332211 269999999996
No 52
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=97.65 E-value=0.00011 Score=74.10 Aligned_cols=71 Identities=13% Similarity=0.105 Sum_probs=48.4
Q ss_pred CCceEEEccCcCc----HHHHHHHHHHhcCCCCCCceEEEecCcccCC-CCc-HHHHHHHHHhhhhCCCceEEeccCCcc
Q 010977 220 DSEVIVVGDILGQ----FHDLVALFEENAGFPSDHRYFVFNGNYVDKG-SWG-LEVLLVLLAWKVLMPHRVYLLRGNHET 293 (496)
Q Consensus 220 ~~~i~VVGDIHG~----~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG-~~S-lEvL~lL~~LK~~~P~~V~lLRGNHE~ 293 (496)
+.++.+++|+|.. ...+.++++ ....... +.+++.|||+|.+ +.. -+....|..|+... .++.+.||||.
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~-~i~~~~p-DlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~--pv~~V~GNHD~ 124 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIA-LGIEQKP-DLILLGGDYVLFDMPLNFSAFSDVLSPLAECA--PTFACFGNHDR 124 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHH-HHHhcCC-CEEEEccCcCCCCccccHHHHHHHHHHHhhcC--CEEEecCCCCc
Confidence 4689999999976 455677776 4332233 4599999999954 222 34455566665434 49999999996
Q ss_pred c
Q 010977 294 K 294 (496)
Q Consensus 294 ~ 294 (496)
.
T Consensus 125 ~ 125 (271)
T PRK11340 125 P 125 (271)
T ss_pred c
Confidence 4
No 53
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=97.60 E-value=0.0026 Score=61.88 Aligned_cols=69 Identities=19% Similarity=0.150 Sum_probs=39.3
Q ss_pred ceEEEccCcCcHH----HHH----HHHHHhcCCCCCCceEEEecCcccCCCCcH--HHHH-HHHHhhhhCCCceEEeccC
Q 010977 222 EVIVVGDILGQFH----DLV----ALFEENAGFPSDHRYFVFNGNYVDKGSWGL--EVLL-VLLAWKVLMPHRVYLLRGN 290 (496)
Q Consensus 222 ~i~VVGDIHG~~~----dL~----~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl--EvL~-lL~~LK~~~P~~V~lLRGN 290 (496)
++.++||+|-... .+. .+.+ ...... -+.+|++||++|.|.... +.+. .+-.|. ..+--++.++||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~-~~~~~~-~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GN 78 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVD-NAEALN-IAFVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGN 78 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHH-HHHHcC-CCEEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCC
Confidence 5789999995222 222 2333 222222 244999999999998432 2222 222222 012348899999
Q ss_pred Ccc
Q 010977 291 HET 293 (496)
Q Consensus 291 HE~ 293 (496)
||.
T Consensus 79 HD~ 81 (214)
T cd07399 79 HDL 81 (214)
T ss_pred Ccc
Confidence 994
No 54
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=97.47 E-value=0.0009 Score=63.60 Aligned_cols=65 Identities=12% Similarity=0.200 Sum_probs=43.6
Q ss_pred CceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccc
Q 010977 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (496)
Q Consensus 221 ~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ 295 (496)
+++.|++|+||...+..+..+ ..... +-+.+|.+||++..+.. ..+ .......++.++||.|...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~-~~~~~-~~d~vih~GD~~~~~~~-----~~l---~~~~~~~i~~V~GN~D~~~ 66 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALK-IFNLE-KVDAVIHAGDSTSPFTL-----DAL---EGGLAAKLIAVRGNCDGEV 66 (172)
T ss_pred cEEEEEeccCCChhhhhHHHH-Hhhhc-CCCEEEECCCcCCccch-----HHh---hcccccceEEEEccCCCcc
Confidence 689999999999975444444 33333 33449999999976543 111 1102458999999999754
No 55
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.40 E-value=0.0006 Score=63.76 Aligned_cols=69 Identities=20% Similarity=0.214 Sum_probs=43.0
Q ss_pred eEEEccCcCcHHHH---------------HHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEe
Q 010977 223 VIVVGDILGQFHDL---------------VALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLL 287 (496)
Q Consensus 223 i~VVGDIHG~~~dL---------------~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lL 287 (496)
+++++|+|=..... ..+++.........+.++++||++++|..+.. +..+.. .+..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~----~~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSR----LNGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHh----CCCCeEEE
Confidence 36888888555432 22333222222234569999999999986643 333332 34469999
Q ss_pred ccCCccccc
Q 010977 288 RGNHETKNC 296 (496)
Q Consensus 288 RGNHE~~~l 296 (496)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997543
No 56
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.29 E-value=0.00051 Score=69.37 Aligned_cols=73 Identities=16% Similarity=0.259 Sum_probs=44.2
Q ss_pred eEEEccCcCcHHHHHHHHHHhcCC-CCCCceEEEecCcccCCCC-cHHHHH------HHHHh------hhhCCCceEEec
Q 010977 223 VIVVGDILGQFHDLVALFEENAGF-PSDHRYFVFNGNYVDKGSW-GLEVLL------VLLAW------KVLMPHRVYLLR 288 (496)
Q Consensus 223 i~VVGDIHG~~~dL~~il~~~~g~-p~~~~~~VFLGDyVDRG~~-SlEvL~------lL~~L------K~~~P~~V~lLR 288 (496)
|+|+||+||+++.+...++..... ..+.+-+|++||+-..+.. ..+.+. -+..+ ....|--++++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 579999999999987754411111 1234559999999654433 333321 11111 223565689999
Q ss_pred cCCcccc
Q 010977 289 GNHETKN 295 (496)
Q Consensus 289 GNHE~~~ 295 (496)
||||...
T Consensus 81 GNHE~~~ 87 (262)
T cd00844 81 GNHEASN 87 (262)
T ss_pred CCCCCHH
Confidence 9999643
No 57
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.28 E-value=0.0005 Score=67.73 Aligned_cols=68 Identities=15% Similarity=0.102 Sum_probs=46.1
Q ss_pred ceEEEccCcCcH------HHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCccc
Q 010977 222 EVIVVGDILGQF------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (496)
Q Consensus 222 ~i~VVGDIHG~~------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~ 294 (496)
++.+++|+|+.+ ..|.++++ .+.... -+.+|+.||+++++..+.+.+..+..+ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~-~~~~~~-~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQ-YLKKQK-IDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHH-HHHhcC-CCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 478999999653 22455555 333333 345999999999876666666555442 334699999999964
No 58
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.16 E-value=0.0008 Score=64.27 Aligned_cols=73 Identities=19% Similarity=0.268 Sum_probs=45.5
Q ss_pred ceEEEccCc-CcH--------------HHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHh-hhh--CCCc
Q 010977 222 EVIVVGDIL-GQF--------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAW-KVL--MPHR 283 (496)
Q Consensus 222 ~i~VVGDIH-G~~--------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~L-K~~--~P~~ 283 (496)
+++.++|+| |.. ..|.++++ .+..... +.+|+.||++|.+..+.+.+..+... +.. ..-.
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVE-LAIEEKV-DFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIP 78 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHH-HHHhcCC-CEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCC
Confidence 478899999 322 23555555 4333333 35999999999887655544433322 211 1346
Q ss_pred eEEeccCCccccc
Q 010977 284 VYLLRGNHETKNC 296 (496)
Q Consensus 284 V~lLRGNHE~~~l 296 (496)
++++.||||....
T Consensus 79 v~~~~GNHD~~~~ 91 (223)
T cd00840 79 VFIIAGNHDSPSR 91 (223)
T ss_pred EEEecCCCCCccc
Confidence 9999999997664
No 59
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.11 E-value=0.0019 Score=71.06 Aligned_cols=75 Identities=19% Similarity=0.301 Sum_probs=45.0
Q ss_pred CCCceEEEccCc-CcH----HHHHHHHHHhcCCC-------CCCceEEEecCcccC-CCCc--------------H-HHH
Q 010977 219 EDSEVIVVGDIL-GQF----HDLVALFEENAGFP-------SDHRYFVFNGNYVDK-GSWG--------------L-EVL 270 (496)
Q Consensus 219 ~~~~i~VVGDIH-G~~----~dL~~il~~~~g~p-------~~~~~~VFLGDyVDR-G~~S--------------l-EvL 270 (496)
.+..+.+++|+| |.- ..+..+++...|.. ..-..+|++||++|. |.++ . ++.
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~ 321 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAA 321 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHH
Confidence 346899999999 653 22444444233442 223469999999994 3221 1 233
Q ss_pred HHHHHhhhhCCCceEEeccCCcccc
Q 010977 271 LVLLAWKVLMPHRVYLLRGNHETKN 295 (496)
Q Consensus 271 ~lL~~LK~~~P~~V~lLRGNHE~~~ 295 (496)
.+|..+. ..-.|++++||||...
T Consensus 322 ~~L~~L~--~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 322 EYLKQIP--EDIKIIISPGNHDAVR 344 (504)
T ss_pred HHHHhhh--cCCeEEEecCCCcchh
Confidence 3444332 2236999999999754
No 60
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.09 E-value=0.00089 Score=69.84 Aligned_cols=73 Identities=15% Similarity=0.207 Sum_probs=45.9
Q ss_pred CceEEEccCc-C-----------cHHHHHHHHHHhcCCCCCCceEEEecCcccCC-CCcHHHHHHHHH--hhh--hCCCc
Q 010977 221 SEVIVVGDIL-G-----------QFHDLVALFEENAGFPSDHRYFVFNGNYVDKG-SWGLEVLLVLLA--WKV--LMPHR 283 (496)
Q Consensus 221 ~~i~VVGDIH-G-----------~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG-~~SlEvL~lL~~--LK~--~~P~~ 283 (496)
++++.++|+| | +...|.++++ .+.... -+.+|+.||++|+. +.+.+++.++.. ++. ..+-.
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~-~a~~~~-vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~ 78 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIE-YSKAHG-ITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGIT 78 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHH-HHHHcC-CCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCe
Confidence 4788999999 4 2344555554 333222 34599999999985 455555444432 221 23446
Q ss_pred eEEeccCCcccc
Q 010977 284 VYLLRGNHETKN 295 (496)
Q Consensus 284 V~lLRGNHE~~~ 295 (496)
|+++.||||...
T Consensus 79 v~~I~GNHD~~~ 90 (340)
T PHA02546 79 LHVLVGNHDMYY 90 (340)
T ss_pred EEEEccCCCccc
Confidence 999999999743
No 61
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.08 E-value=0.0014 Score=65.80 Aligned_cols=73 Identities=23% Similarity=0.199 Sum_probs=44.7
Q ss_pred ceEEEccCc-C------------cHHHHHHHHHHhcCCCCCCceEEEecCcccCCCC-cHHHHHHHHHhhhhCCCceEEe
Q 010977 222 EVIVVGDIL-G------------QFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSW-GLEVLLVLLAWKVLMPHRVYLL 287 (496)
Q Consensus 222 ~i~VVGDIH-G------------~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~-SlEvL~lL~~LK~~~P~~V~lL 287 (496)
++.+++|+| + ....|.++++ .+.... .+.+|++||+++.|.. +.+-+..+...-...+-.++.+
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~-~i~~~~-~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v 79 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVE-EWNRES-LDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHV 79 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHH-HHHcCC-CCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEe
Confidence 578999999 2 1355666666 332222 3449999999999873 2222222222211223369999
Q ss_pred ccCCccccc
Q 010977 288 RGNHETKNC 296 (496)
Q Consensus 288 RGNHE~~~l 296 (496)
.||||....
T Consensus 80 ~GNHD~~~~ 88 (267)
T cd07396 80 LGNHDLYNP 88 (267)
T ss_pred cCccccccc
Confidence 999998643
No 62
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.01 E-value=0.0014 Score=62.81 Aligned_cols=23 Identities=9% Similarity=0.131 Sum_probs=18.7
Q ss_pred ChhHHHHHHHhcCceEEEeecCC
Q 010977 419 GPDCTEEFLKENHLKLIIRSHEG 441 (496)
Q Consensus 419 G~d~~~~FL~~n~l~~IIRgHe~ 441 (496)
.+..+.+.++..+.+.+|.||+-
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H 199 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTH 199 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCC
Confidence 34556777889999999999994
No 63
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=96.90 E-value=0.0035 Score=60.98 Aligned_cols=71 Identities=23% Similarity=0.307 Sum_probs=43.8
Q ss_pred ceEEEccCcCc------------HHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEecc
Q 010977 222 EVIVVGDILGQ------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRG 289 (496)
Q Consensus 222 ~i~VVGDIHG~------------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRG 289 (496)
++.+++|+|=. ...|.++++......+..+-+|++||+++.|... ....+.......+-.++.++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~--~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPE--SYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHH--HHHHHHHHHhhcCCCEEEeCC
Confidence 47899999943 3456667762233323344599999999987632 122222221122446899999
Q ss_pred CCccc
Q 010977 290 NHETK 294 (496)
Q Consensus 290 NHE~~ 294 (496)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 64
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=96.90 E-value=0.0029 Score=63.63 Aligned_cols=72 Identities=15% Similarity=0.170 Sum_probs=45.8
Q ss_pred CceEEEccCc-C-----------cHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEec
Q 010977 221 SEVIVVGDIL-G-----------QFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLR 288 (496)
Q Consensus 221 ~~i~VVGDIH-G-----------~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLR 288 (496)
.++..++|+| . ....|.++++........-+.+|+.||+++.|.. +-...+...-...+..++.+.
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~~--~~~~~~~~~l~~l~~Pv~~v~ 92 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHSS--EAYQHFAEGIAPLRKPCVWLP 92 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCCH--HHHHHHHHHHhhcCCcEEEeC
Confidence 6799999999 1 2455777776222333333559999999998852 223222222222344699999
Q ss_pred cCCccc
Q 010977 289 GNHETK 294 (496)
Q Consensus 289 GNHE~~ 294 (496)
||||..
T Consensus 93 GNHD~~ 98 (275)
T PRK11148 93 GNHDFQ 98 (275)
T ss_pred CCCCCh
Confidence 999973
No 65
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.81 E-value=0.076 Score=53.49 Aligned_cols=23 Identities=17% Similarity=0.260 Sum_probs=21.4
Q ss_pred eChhHHHHHHHhcCceEEEeecC
Q 010977 418 WGPDCTEEFLKENHLKLIIRSHE 440 (496)
Q Consensus 418 FG~d~~~~FL~~n~l~~IIRgHe 440 (496)
-.++.++..|+..+-.+|.-||.
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhd 225 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDD 225 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCC
Confidence 47889999999999999999999
No 66
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=96.81 E-value=0.0039 Score=58.45 Aligned_cols=45 Identities=20% Similarity=0.122 Sum_probs=27.4
Q ss_pred ceEEEecCcccCCCCc--HHHHHHHHHhhhhCCCceEEeccCCcccc
Q 010977 251 RYFVFNGNYVDKGSWG--LEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (496)
Q Consensus 251 ~~~VFLGDyVDRG~~S--lEvL~lL~~LK~~~P~~V~lLRGNHE~~~ 295 (496)
+.+|++||+++....+ .+....-+......+-.+++++||||...
T Consensus 43 d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 43 ERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred CEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 4599999999865432 22222101112234457999999999753
No 67
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=96.78 E-value=0.003 Score=63.28 Aligned_cols=73 Identities=16% Similarity=0.132 Sum_probs=46.1
Q ss_pred CceEEEccCcC-c-----------HHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHH----HHHHhhhhCCCce
Q 010977 221 SEVIVVGDILG-Q-----------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLL----VLLAWKVLMPHRV 284 (496)
Q Consensus 221 ~~i~VVGDIHG-~-----------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~----lL~~LK~~~P~~V 284 (496)
++++.++|+|- . ...|.++++ .+... ..+.+++.||++|+..-+.+... ++..|+...|-.+
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~-~~~~~-~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v 78 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLE-FAKAE-QIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPI 78 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHH-HHHHc-CCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceE
Confidence 47889999993 2 233444544 33222 23459999999999866655432 3334443333469
Q ss_pred EEeccCCcccc
Q 010977 285 YLLRGNHETKN 295 (496)
Q Consensus 285 ~lLRGNHE~~~ 295 (496)
+++.||||...
T Consensus 79 ~~i~GNHD~~~ 89 (253)
T TIGR00619 79 VVISGNHDSAQ 89 (253)
T ss_pred EEEccCCCChh
Confidence 99999999853
No 68
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=96.64 E-value=0.004 Score=66.72 Aligned_cols=72 Identities=21% Similarity=0.258 Sum_probs=43.9
Q ss_pred CceEEEccCc-Cc-H------HH----HHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHH----HHHHHhhhhCCCce
Q 010977 221 SEVIVVGDIL-GQ-F------HD----LVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVL----LVLLAWKVLMPHRV 284 (496)
Q Consensus 221 ~~i~VVGDIH-G~-~------~d----L~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL----~lL~~LK~~~P~~V 284 (496)
++++.++|+| |. + .+ |..+.+ .+.... .+.+|+.||++|++..+.+.. .++..|+. .+-.+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~-~i~~~~-~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v 77 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLE-QVQEHQ-VDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQL 77 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHH-HHHhcC-CCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcE
Confidence 4688999999 42 1 11 233333 332223 344999999999986654432 23334442 23469
Q ss_pred EEeccCCcccc
Q 010977 285 YLLRGNHETKN 295 (496)
Q Consensus 285 ~lLRGNHE~~~ 295 (496)
+++.||||...
T Consensus 78 ~~I~GNHD~~~ 88 (407)
T PRK10966 78 VVLAGNHDSVA 88 (407)
T ss_pred EEEcCCCCChh
Confidence 99999999754
No 69
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.53 E-value=0.0075 Score=59.91 Aligned_cols=101 Identities=19% Similarity=0.252 Sum_probs=57.6
Q ss_pred EEccCcCc------HHHHHHHHHHhcCCCCCCceEEEecCcccC--CCC--c---HHHHHHHHHhhhhCCCceEEeccCC
Q 010977 225 VVGDILGQ------FHDLVALFEENAGFPSDHRYFVFNGNYVDK--GSW--G---LEVLLVLLAWKVLMPHRVYLLRGNH 291 (496)
Q Consensus 225 VVGDIHG~------~~dL~~il~~~~g~p~~~~~~VFLGDyVDR--G~~--S---lEvL~lL~~LK~~~P~~V~lLRGNH 291 (496)
.|+|+|=. -+-|+..++ ..+++.+.+.++||++|- |.. + -++...|..+ .....++|.+.|||
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~---~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~ 77 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLR---EEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNH 77 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHH---hccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCch
Confidence 57888843 233455565 233345569999999962 322 1 3344444433 24557899999999
Q ss_pred cccccccccCchHHHHHHhCcchhhHHHHhhhhhhcCCcceeEe---eceEEEEecCCCCC
Q 010977 292 ETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATII---AQGVYTTHGGLFRR 349 (496)
Q Consensus 292 E~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii---~~~il~vHGGI~~s 349 (496)
|. .+... .....| .+.-+|-..++ +.+++++||.....
T Consensus 78 Df-ll~~~------f~~~~g-------------~~~l~~~~~~~~l~g~~~Ll~HGD~f~t 118 (237)
T COG2908 78 DF-LLGKR------FAQEAG-------------GMTLLPDPIVLDLYGKRILLAHGDTFCT 118 (237)
T ss_pred HH-HHHHH------HHhhcC-------------ceEEcCcceeeeecCcEEEEEeCCcccc
Confidence 93 33111 111111 13344544444 47999999988653
No 70
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=96.51 E-value=0.0068 Score=59.65 Aligned_cols=69 Identities=19% Similarity=0.220 Sum_probs=39.8
Q ss_pred eEEEccCcCc---------HH----HH-HHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEec
Q 010977 223 VIVVGDILGQ---------FH----DL-VALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLR 288 (496)
Q Consensus 223 i~VVGDIHG~---------~~----dL-~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLR 288 (496)
+++++|||-. +. ++ .++.+.....-++.+.+|+.||+++++... +....+-.++. .|..++++.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~-l~~~v~~V~ 78 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLE-EAKLDLAWIDA-LPGTKVLLK 78 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChH-HHHHHHHHHHh-CCCCeEEEe
Confidence 4789999954 22 23 333331112222445599999999887643 33232222332 233589999
Q ss_pred cCCcc
Q 010977 289 GNHET 293 (496)
Q Consensus 289 GNHE~ 293 (496)
||||.
T Consensus 79 GNHD~ 83 (232)
T cd07393 79 GNHDY 83 (232)
T ss_pred CCccc
Confidence 99997
No 71
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=96.37 E-value=0.0079 Score=57.42 Aligned_cols=71 Identities=14% Similarity=0.053 Sum_probs=43.2
Q ss_pred CceEEEccCcCcHH-----------HHHHHHHHhcCCCCCCceEEEecCcccCCCCc---HHHHHHHHHhhhhCCCceEE
Q 010977 221 SEVIVVGDILGQFH-----------DLVALFEENAGFPSDHRYFVFNGNYVDKGSWG---LEVLLVLLAWKVLMPHRVYL 286 (496)
Q Consensus 221 ~~i~VVGDIHG~~~-----------dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S---lEvL~lL~~LK~~~P~~V~l 286 (496)
.++.+++|+|-... ...+.+++...... .+.+|++||+++.+... .+.+..++.......-.+++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~ 81 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEK-PDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAA 81 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcC-CCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEE
Confidence 47899999995221 11222321222222 24499999999977653 55555554433333346899
Q ss_pred eccCCc
Q 010977 287 LRGNHE 292 (496)
Q Consensus 287 LRGNHE 292 (496)
+.||||
T Consensus 82 ~~GNHD 87 (199)
T cd07383 82 TFGNHD 87 (199)
T ss_pred ECccCC
Confidence 999999
No 72
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.32 E-value=0.01 Score=58.59 Aligned_cols=70 Identities=20% Similarity=0.238 Sum_probs=40.7
Q ss_pred CceEEEccCc-CcHHHH------------HHHHHH---hcCCCCCCceEEEecCcccCCCCc--H-HHHHHHHHhhhhCC
Q 010977 221 SEVIVVGDIL-GQFHDL------------VALFEE---NAGFPSDHRYFVFNGNYVDKGSWG--L-EVLLVLLAWKVLMP 281 (496)
Q Consensus 221 ~~i~VVGDIH-G~~~dL------------~~il~~---~~g~p~~~~~~VFLGDyVDRG~~S--l-EvL~lL~~LK~~~P 281 (496)
.++.||+|+| |.-..+ .+.++. ..... ..+.+|++||+++....+ . ++..++-.+ .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~-~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~---~- 89 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKY-GIEALIINGDLKHEFKKGLEWRFIREFIEVT---F- 89 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhc-CCCEEEEcCccccccCChHHHHHHHHHHHhc---C-
Confidence 4689999999 542222 123331 22222 234599999999765542 2 222233222 2
Q ss_pred CceEEeccCCcccc
Q 010977 282 HRVYLLRGNHETKN 295 (496)
Q Consensus 282 ~~V~lLRGNHE~~~ 295 (496)
..+++++||||...
T Consensus 90 ~~v~~V~GNHD~~~ 103 (225)
T TIGR00024 90 RDLILIRGNHDALI 103 (225)
T ss_pred CcEEEECCCCCCcc
Confidence 37999999999754
No 73
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.26 E-value=0.0094 Score=55.43 Aligned_cols=68 Identities=19% Similarity=0.263 Sum_probs=48.5
Q ss_pred EEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCc
Q 010977 224 IVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 292 (496)
Q Consensus 224 ~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE 292 (496)
.|+||+||+++.+.+-+++.......=+.+|++||+..-...+ +-+.-.+.=....|--.|++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~-~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDD-EELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccch-hhHHHHhcCCccCCCCEEEECCCCC
Confidence 4899999999999888773233333345699999999765554 3344444444567778999999998
No 74
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=96.25 E-value=0.0068 Score=56.29 Aligned_cols=46 Identities=20% Similarity=0.302 Sum_probs=28.3
Q ss_pred CceEEEecCcccCCCCcH-HHH-HHHHHhhhh---C-CCceEEeccCCcccc
Q 010977 250 HRYFVFNGNYVDKGSWGL-EVL-LVLLAWKVL---M-PHRVYLLRGNHETKN 295 (496)
Q Consensus 250 ~~~~VFLGDyVDRG~~Sl-EvL-~lL~~LK~~---~-P~~V~lLRGNHE~~~ 295 (496)
.+.+|++||++|.|..+- +.. ..+..++.. . +-.++++.||||...
T Consensus 39 pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 39 PDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 345999999999886532 221 222222222 2 246999999999754
No 75
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=96.22 E-value=0.013 Score=62.84 Aligned_cols=54 Identities=11% Similarity=0.130 Sum_probs=40.6
Q ss_pred CCceEEEccCcCc------------HHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHH
Q 010977 220 DSEVIVVGDILGQ------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLA 275 (496)
Q Consensus 220 ~~~i~VVGDIHG~------------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~ 275 (496)
.+++.+++|+|-- +..|.++++ .+..... +-+|+.||++|++.-|.+++..++.
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~-~a~~~~v-D~VLiaGDLFd~~~Ps~~~~~~~~~ 68 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQ-IAKEQDV-DMILLGGDLFHENKPSRKSLYQVLR 68 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHH-HHHHcCC-CEEEECCccCCCCCCCHHHHHHHHH
Confidence 4789999999932 456777777 5544433 4499999999999999888865543
No 76
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=96.22 E-value=0.16 Score=50.27 Aligned_cols=178 Identities=17% Similarity=0.132 Sum_probs=96.5
Q ss_pred CCceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcc--cCCCCcHHHHHH--HHHhhhhCCCceEEeccCCcccc
Q 010977 220 DSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYV--DKGSWGLEVLLV--LLAWKVLMPHRVYLLRGNHETKN 295 (496)
Q Consensus 220 ~~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyV--DRG~~SlEvL~l--L~~LK~~~P~~V~lLRGNHE~~~ 295 (496)
.+++..+.|+||.++.+.+++. .++.... +.+++.||+. +.|+-- ++... +-.++ ..--.|+.++||-|...
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~-~~~~~~~-D~lviaGDlt~~~~~~~~-~~~~~~~~e~l~-~~~~~v~avpGNcD~~~ 78 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLN-AAADIRA-DLLVIAGDLTYFHFGPKE-VAEELNKLEALK-ELGIPVLAVPGNCDPPE 78 (226)
T ss_pred cceEEEEeccccchHHHHHHHH-HHhhccC-CEEEEecceehhhcCchH-HHHhhhHHHHHH-hcCCeEEEEcCCCChHH
Confidence 3789999999999999999998 6654433 4499999999 887742 22222 33444 23347999999987765
Q ss_pred cccccCchHHHHHHhCcchhhHHHHhhhhhhcCCcceeEeeceEEEEecCCCCCCCCCcccccccccccccccCCCCCHH
Q 010977 296 CTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLR 375 (496)
Q Consensus 296 ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGI~~s~~~~~~~~~~~~k~~~~~~~~l~sld 375 (496)
+- .....++.. +.. -..-+++--||-=||..+.+-.+ +.-.+=+
T Consensus 79 v~-------~~l~~~~~~----v~~----------~v~~i~~~~~~G~Ggsn~tp~nt---------------~~e~~E~ 122 (226)
T COG2129 79 VI-------DVLKNAGVN----VHG----------RVVEIGGYGFVGFGGSNPTPFNT---------------PREFSED 122 (226)
T ss_pred HH-------HHHHhcccc----ccc----------ceEEecCcEEEEecccCCCCCCC---------------ccccCHH
Confidence 41 112222221 111 11223344455557775543211 1122334
Q ss_pred HHHhhccccccCCCccccccccc-cCCCCCCCcccccCCCeeeeChhHHHHHHHhcCceEEEeecCC
Q 010977 376 EFAKVNRFLEDVPENDLLSDVLW-SDPSSEAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEG 441 (496)
Q Consensus 376 dI~~i~R~~~~p~~~~l~~DLLW-SDP~~~~g~~~n~RG~g~~FG~d~~~~FL~~n~l~~IIRgHe~ 441 (496)
+|...-+.......+.. .=++. +-|-...- ..+-| -.--|..+++++.++.+-.+.|+||=-
T Consensus 123 ~I~s~l~~~v~~~~~~~-~Il~~HaPP~gt~~--d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIH 185 (226)
T COG2129 123 EIYSKLKSLVKKADNPV-NILLTHAPPYGTLL--DTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIH 185 (226)
T ss_pred HHHHHHHHHHhcccCcc-eEEEecCCCCCccc--cCCCC-ccccchHHHHHHHHHhCCceEEEeeec
Confidence 44433332221111100 01111 11221100 01122 124588999999999999999999973
No 77
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=95.88 E-value=0.012 Score=59.25 Aligned_cols=70 Identities=17% Similarity=0.179 Sum_probs=40.8
Q ss_pred CceEEEccCcC----cHHHHHHHHHHhcCCCCCCceEEEecCcccC-CCC---cHHHH-HHHHHhhhhCCCceEEeccCC
Q 010977 221 SEVIVVGDILG----QFHDLVALFEENAGFPSDHRYFVFNGNYVDK-GSW---GLEVL-LVLLAWKVLMPHRVYLLRGNH 291 (496)
Q Consensus 221 ~~i~VVGDIHG----~~~dL~~il~~~~g~p~~~~~~VFLGDyVDR-G~~---SlEvL-~lL~~LK~~~P~~V~lLRGNH 291 (496)
-++.|+||.|. +...+.++.+ . ...-+-+|++||+++- |.. .-+.+ ..+-.+....| ++.++|||
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~-~---~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNH 78 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEK-E---LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNH 78 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHh-c---cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCccc
Confidence 57999999995 2333333333 2 2233459999999954 432 12222 22222222344 88999999
Q ss_pred ccccc
Q 010977 292 ETKNC 296 (496)
Q Consensus 292 E~~~l 296 (496)
|....
T Consensus 79 D~~~~ 83 (294)
T cd00839 79 EADYN 83 (294)
T ss_pred ccccC
Confidence 98653
No 78
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=95.85 E-value=0.031 Score=55.54 Aligned_cols=74 Identities=12% Similarity=0.029 Sum_probs=43.5
Q ss_pred CceEEEccCcCcH----------------HHHHHHHHHhcCCCCCCceEEEecCcccCCCCcH---HHHH-HHHHhhhh-
Q 010977 221 SEVIVVGDILGQF----------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL---EVLL-VLLAWKVL- 279 (496)
Q Consensus 221 ~~i~VVGDIHG~~----------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl---EvL~-lL~~LK~~- 279 (496)
-++.+++|+|--. ..|.++++......+..+.++++||+++.|...- +... +.-.++..
T Consensus 5 ~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (262)
T cd07395 5 FYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLD 84 (262)
T ss_pred EEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhcc
Confidence 3578888888663 2345555522233333455999999999887541 1111 11222221
Q ss_pred CCCceEEeccCCccc
Q 010977 280 MPHRVYLLRGNHETK 294 (496)
Q Consensus 280 ~P~~V~lLRGNHE~~ 294 (496)
.+-.++.+.||||..
T Consensus 85 ~~vp~~~i~GNHD~~ 99 (262)
T cd07395 85 PDIPLVCVCGNHDVG 99 (262)
T ss_pred CCCcEEEeCCCCCCC
Confidence 133599999999974
No 79
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=95.67 E-value=0.037 Score=54.56 Aligned_cols=71 Identities=20% Similarity=0.250 Sum_probs=47.5
Q ss_pred ceEEEccCcCc------HHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHh--hhhCCCceEEeccCCcc
Q 010977 222 EVIVVGDILGQ------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAW--KVLMPHRVYLLRGNHET 293 (496)
Q Consensus 222 ~i~VVGDIHG~------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~L--K~~~P~~V~lLRGNHE~ 293 (496)
++..|+|+|-- ...+..+++ ....... +.+|+.||+.+.|.. .| ...+..+ +...|..+++++||||.
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~-~i~~~~~-D~~v~tGDl~~~~~~-~~-~~~~~~~l~~~~~~~~~~~vpGNHD~ 77 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLA-AIEQLKP-DLLVVTGDLTNDGEP-EE-YRRLKELLARLELPAPVIVVPGNHDA 77 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHH-HHhcCCC-CEEEEccCcCCCCCH-HH-HHHHHHHHhhccCCCceEeeCCCCcC
Confidence 67889999976 234555566 5554444 559999999999642 22 2222222 23567789999999998
Q ss_pred ccc
Q 010977 294 KNC 296 (496)
Q Consensus 294 ~~l 296 (496)
+..
T Consensus 78 ~~~ 80 (301)
T COG1409 78 RVV 80 (301)
T ss_pred Cch
Confidence 765
No 80
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=95.61 E-value=0.023 Score=56.16 Aligned_cols=70 Identities=16% Similarity=0.233 Sum_probs=39.1
Q ss_pred EEEccCc--CcH---HHHHHHHHHhcCCCC---CCceEEEecCcccCCCC------------cHH----HHHHHHHhhhh
Q 010977 224 IVVGDIL--GQF---HDLVALFEENAGFPS---DHRYFVFNGNYVDKGSW------------GLE----VLLVLLAWKVL 279 (496)
Q Consensus 224 ~VVGDIH--G~~---~dL~~il~~~~g~p~---~~~~~VFLGDyVDRG~~------------SlE----vL~lL~~LK~~ 279 (496)
++++|+| +.. ..+..+++...+... .-+.+|++||++|+... ..+ +..++-.+.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 5789999 432 222334442234322 33569999999997310 011 222332232
Q ss_pred CCCceEEeccCCcccc
Q 010977 280 MPHRVYLLRGNHETKN 295 (496)
Q Consensus 280 ~P~~V~lLRGNHE~~~ 295 (496)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2346999999999753
No 81
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=95.47 E-value=0.00077 Score=70.88 Aligned_cols=97 Identities=13% Similarity=-0.161 Sum_probs=76.8
Q ss_pred CCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccccccccCchHHHHHHhCcchhhHHHHhhhhhhc
Q 010977 248 SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFR 327 (496)
Q Consensus 248 ~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~e~~~ky~~~~~~~l~~~~~~~f~ 327 (496)
+.....|+++++++++.++++.+-+-+..+..+..+.-..++||+. .+++..++...-.......+++..++.+.
T Consensus 46 ~d~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~-----~~~~R~~LVlp~l~S~riyvid~~~ep~~ 120 (476)
T KOG0918|consen 46 PDYLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGD-----SSFKRRYLVLPSLNSGRIYVIDVKTEPRK 120 (476)
T ss_pred CcceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccC-----cchhhhheeecccccCceEEEEeccCcCc
Confidence 3445689999999999999999999999999999899999999943 44555554444444445557788889999
Q ss_pred CCcceeEeeceEEEEecCCCCCC
Q 010977 328 TLPLATIIAQGVYTTHGGLFRRT 350 (496)
Q Consensus 328 ~LPlaaii~~~il~vHGGI~~s~ 350 (496)
.++.+.+.+ ++++.||+.+|..
T Consensus 121 ~~l~k~i~~-~il~~~~l~~Pht 142 (476)
T KOG0918|consen 121 PSLEKTIDP-DILEKTGLACPHT 142 (476)
T ss_pred cceeeeech-hhHhhcCCcCCcc
Confidence 999977665 9999999997754
No 82
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=95.45 E-value=0.034 Score=55.66 Aligned_cols=71 Identities=15% Similarity=0.130 Sum_probs=39.5
Q ss_pred eEEEccCcCcHH------HH-HHHHHHhcCCCCCCceEEEecCcccCCCCc--------H---HHHHHHHHhhhhCCCce
Q 010977 223 VIVVGDILGQFH------DL-VALFEENAGFPSDHRYFVFNGNYVDKGSWG--------L---EVLLVLLAWKVLMPHRV 284 (496)
Q Consensus 223 i~VVGDIHG~~~------dL-~~il~~~~g~p~~~~~~VFLGDyVDRG~~S--------l---EvL~lL~~LK~~~P~~V 284 (496)
+..++|+|-... .. ..+++ ....... +.+|++||++|++... . +.+..+..+....+..+
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~-~i~~~~p-d~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 79 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSN-FIDVIKP-ALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKW 79 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHH-HHHhhCC-CEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceE
Confidence 467889995221 12 22333 2222222 3599999999986521 1 11222222222335679
Q ss_pred EEeccCCcccc
Q 010977 285 YLLRGNHETKN 295 (496)
Q Consensus 285 ~lLRGNHE~~~ 295 (496)
+.++||||...
T Consensus 80 ~~v~GNHD~~~ 90 (256)
T cd07401 80 FDIRGNHDLFN 90 (256)
T ss_pred EEeCCCCCcCC
Confidence 99999999853
No 83
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=95.22 E-value=0.034 Score=54.74 Aligned_cols=67 Identities=18% Similarity=0.242 Sum_probs=41.9
Q ss_pred ceEEEccCcCcH---------HHHHHHHHHhcCCCCCCceEEEecCcccCCCCcH-----HHHHHHHHhhhhCCCceEEe
Q 010977 222 EVIVVGDILGQF---------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----EVLLVLLAWKVLMPHRVYLL 287 (496)
Q Consensus 222 ~i~VVGDIHG~~---------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-----EvL~lL~~LK~~~P~~V~lL 287 (496)
+++.++|+||.+ ..+..+++ .......+..++..||+++.++.+- .++..|-++ - -.++.
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~-~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~---g--~d~~~ 75 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIK-EERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL---G--YDAVT 75 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHH-HHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc---C--CCEEe
Confidence 578899999887 45666666 3322233444788999999887653 344444322 2 23345
Q ss_pred ccCCccc
Q 010977 288 RGNHETK 294 (496)
Q Consensus 288 RGNHE~~ 294 (496)
.||||..
T Consensus 76 ~GNHe~d 82 (252)
T cd00845 76 IGNHEFD 82 (252)
T ss_pred ecccccc
Confidence 6999963
No 84
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=95.15 E-value=0.032 Score=52.60 Aligned_cols=45 Identities=24% Similarity=0.337 Sum_probs=28.3
Q ss_pred ceEEEecCcccCCCCcH--HHHHHHHHhhhhC--------CCceEEeccCCcccc
Q 010977 251 RYFVFNGNYVDKGSWGL--EVLLVLLAWKVLM--------PHRVYLLRGNHETKN 295 (496)
Q Consensus 251 ~~~VFLGDyVDRG~~Sl--EvL~lL~~LK~~~--------P~~V~lLRGNHE~~~ 295 (496)
+.+||+||++|.|.... +....+..++..+ +-.++.+.||||...
T Consensus 47 d~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 47 DVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred CEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 45999999999887532 2222222222111 346999999999854
No 85
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=95.05 E-value=0.038 Score=53.69 Aligned_cols=44 Identities=18% Similarity=0.357 Sum_probs=31.4
Q ss_pred ceEEEecCcccCCCCc--HHHHHHHHHhhhhCC----CceEEeccCCccc
Q 010977 251 RYFVFNGNYVDKGSWG--LEVLLVLLAWKVLMP----HRVYLLRGNHETK 294 (496)
Q Consensus 251 ~~~VFLGDyVDRG~~S--lEvL~lL~~LK~~~P----~~V~lLRGNHE~~ 294 (496)
+.++|+||++|.|+.+ .|....+-.++-.++ -.++.+.||||--
T Consensus 44 D~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 44 DIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 4499999999999964 335555555553322 3588999999964
No 86
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=94.98 E-value=0.12 Score=48.71 Aligned_cols=71 Identities=13% Similarity=0.071 Sum_probs=41.4
Q ss_pred ceEEEccCcC------------cHHHHHH-HHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEec
Q 010977 222 EVIVVGDILG------------QFHDLVA-LFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLR 288 (496)
Q Consensus 222 ~i~VVGDIHG------------~~~dL~~-il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLR 288 (496)
.++.+||+|= +++.... |+.+....-.+++.+.+|||+.-.-..--+...++- +-|+++++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~Ile----rLnGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILE----RLNGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHH----HcCCcEEEee
Confidence 4788888883 2222222 233222333456669999999853332222222222 3478999999
Q ss_pred cCCccccc
Q 010977 289 GNHETKNC 296 (496)
Q Consensus 289 GNHE~~~l 296 (496)
|||+.-.-
T Consensus 81 GNhDk~~~ 88 (186)
T COG4186 81 GNHDKCHP 88 (186)
T ss_pred CCCCCCcc
Confidence 99997554
No 87
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=94.21 E-value=0.09 Score=51.01 Aligned_cols=67 Identities=15% Similarity=0.055 Sum_probs=42.4
Q ss_pred cCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHH-HHHHHHhhhhC-C--------------------CceE
Q 010977 228 DILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEV-LLVLLAWKVLM-P--------------------HRVY 285 (496)
Q Consensus 228 DIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEv-L~lL~~LK~~~-P--------------------~~V~ 285 (496)
|++|+=.=|.++++ .+-+.-..+.++||||++|.|.-+-+- -...-.++-.+ + -.++
T Consensus 24 d~~~~D~YL~~~~~-~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 24 DLFGNDYFLGHIVS-MMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred hhhhhHHHHHHHHH-HHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 55676666788888 554444455699999999998543222 22333333222 1 3568
Q ss_pred EeccCCcccc
Q 010977 286 LLRGNHETKN 295 (496)
Q Consensus 286 lLRGNHE~~~ 295 (496)
+|.||||.-.
T Consensus 103 ~V~GNHDIG~ 112 (193)
T cd08164 103 NIAGNHDVGY 112 (193)
T ss_pred EECCcccCCC
Confidence 8999999743
No 88
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=94.01 E-value=0.13 Score=52.73 Aligned_cols=73 Identities=26% Similarity=0.337 Sum_probs=47.7
Q ss_pred CCceEEEccCcCcHHH--HHHHHHHhcCCCCCCceEEEecCcccC-CCCcHHHH-HHHHHhhhhCCCceEEeccCCcccc
Q 010977 220 DSEVIVVGDILGQFHD--LVALFEENAGFPSDHRYFVFNGNYVDK-GSWGLEVL-LVLLAWKVLMPHRVYLLRGNHETKN 295 (496)
Q Consensus 220 ~~~i~VVGDIHG~~~d--L~~il~~~~g~p~~~~~~VFLGDyVDR-G~~SlEvL-~lL~~LK~~~P~~V~lLRGNHE~~~ 295 (496)
..++.-++|+|-.... ..+.+.......+ +-+++.|||+|+ .+.+.+.+ ..|..|+ .|-.+|.+.||||...
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~--DlivltGD~~~~~~~~~~~~~~~~L~~L~--~~~gv~av~GNHd~~~ 119 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANELP--DLIVLTGDYVDGDRPPGVAALALFLAKLK--APLGVFAVLGNHDYGV 119 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcCC--CEEEEEeeeecCCCCCCHHHHHHHHHhhh--ccCCEEEEeccccccc
Confidence 3578999999977655 2222221222222 669999999996 66665554 4555554 4556999999998765
Q ss_pred c
Q 010977 296 C 296 (496)
Q Consensus 296 l 296 (496)
-
T Consensus 120 ~ 120 (284)
T COG1408 120 D 120 (284)
T ss_pred c
Confidence 3
No 89
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=93.68 E-value=0.13 Score=51.27 Aligned_cols=72 Identities=17% Similarity=0.166 Sum_probs=43.0
Q ss_pred CceEEEccCcCcHHHHH----------------HHHHHhcCCCCCCceEEEecCcccCCCC-----cHHHHHHHHHhhhh
Q 010977 221 SEVIVVGDILGQFHDLV----------------ALFEENAGFPSDHRYFVFNGNYVDKGSW-----GLEVLLVLLAWKVL 279 (496)
Q Consensus 221 ~~i~VVGDIHG~~~dL~----------------~il~~~~g~p~~~~~~VFLGDyVDRG~~-----SlEvL~lL~~LK~~ 279 (496)
.++.|+.|+|=-|..-+ +.+.+.... ...+++|.|||.-.-.+. ..|+-.++-.++..
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~-~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIER-YGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHh-cCCCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 68999999995444322 222211111 223459999999843332 34444444444322
Q ss_pred CCCceEEeccCCccccc
Q 010977 280 MPHRVYLLRGNHETKNC 296 (496)
Q Consensus 280 ~P~~V~lLRGNHE~~~l 296 (496)
.+.+++||||...-
T Consensus 99 ---evi~i~GNHD~~i~ 112 (235)
T COG1407 99 ---EVIIIRGNHDNGIE 112 (235)
T ss_pred ---cEEEEeccCCCccc
Confidence 59999999998654
No 90
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=92.44 E-value=0.32 Score=52.16 Aligned_cols=57 Identities=23% Similarity=0.422 Sum_probs=40.5
Q ss_pred HHHHHHHhcCCCCCCceEEEecCcccCCCCc--HHHHHHHHHhhhhCCC----ceEEeccCCcc
Q 010977 236 LVALFEENAGFPSDHRYFVFNGNYVDKGSWG--LEVLLVLLAWKVLMPH----RVYLLRGNHET 293 (496)
Q Consensus 236 L~~il~~~~g~p~~~~~~VFLGDyVDRG~~S--lEvL~lL~~LK~~~P~----~V~lLRGNHE~ 293 (496)
|.+.|+ ..-+.-..+..+||||++|-|.+. -|=-.....+|-.||. .+..+.||||-
T Consensus 81 lrr~f~-~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFD-MSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHH-HHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 555666 566666666689999999999875 2333455556666664 58899999996
No 91
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=92.28 E-value=0.36 Score=51.09 Aligned_cols=74 Identities=18% Similarity=0.210 Sum_probs=48.3
Q ss_pred CceEEEccCcCc-------------HHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHH-hhhhCC--Cce
Q 010977 221 SEVIVVGDILGQ-------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLA-WKVLMP--HRV 284 (496)
Q Consensus 221 ~~i~VVGDIHG~-------------~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~-LK~~~P--~~V 284 (496)
+++.-++|+|=- +..|..+++ .+-.... +.+|.-||+.|++.-|.+++..+.. ++.+.. =-|
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~-~a~~~~v-D~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv 78 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLE-IAKEEKV-DFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPV 78 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHH-HHHHccC-CEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcE
Confidence 367778888833 233344444 3333233 4599999999999989888776553 332221 259
Q ss_pred EEeccCCccccc
Q 010977 285 YLLRGNHETKNC 296 (496)
Q Consensus 285 ~lLRGNHE~~~l 296 (496)
|++.||||...-
T Consensus 79 ~~I~GNHD~~~~ 90 (390)
T COG0420 79 VVIAGNHDSPSR 90 (390)
T ss_pred EEecCCCCchhc
Confidence 999999998764
No 92
>PLN02533 probable purple acid phosphatase
Probab=92.05 E-value=0.2 Score=54.20 Aligned_cols=70 Identities=16% Similarity=0.183 Sum_probs=38.8
Q ss_pred CceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcH--HHH-HHHHHhhhhCCCceEEeccCCcccc
Q 010977 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL--EVL-LVLLAWKVLMPHRVYLLRGNHETKN 295 (496)
Q Consensus 221 ~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl--EvL-~lL~~LK~~~P~~V~lLRGNHE~~~ 295 (496)
-++.|+||+|-. ......++ .+.... -+-+|+.||+++-+.+.- +.. .++-.+....| ++...||||...
T Consensus 140 ~~f~v~GDlG~~-~~~~~tl~-~i~~~~-pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 140 IKFAVSGDLGTS-EWTKSTLE-HVSKWD-YDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred eEEEEEEeCCCC-cccHHHHH-HHHhcC-CCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 478999999532 11122333 222222 344899999997554321 111 22222322344 888999999864
No 93
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=92.03 E-value=0.18 Score=51.35 Aligned_cols=67 Identities=22% Similarity=0.363 Sum_probs=41.2
Q ss_pred ceEEEccCcCcHHH--------------HHHHHHHhcCCCCCCceEEEecCcccCCCC-c-----HHHHHHHHHhhhhCC
Q 010977 222 EVIVVGDILGQFHD--------------LVALFEENAGFPSDHRYFVFNGNYVDKGSW-G-----LEVLLVLLAWKVLMP 281 (496)
Q Consensus 222 ~i~VVGDIHG~~~d--------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~~-S-----lEvL~lL~~LK~~~P 281 (496)
+++.+.|+||++.. +..+++ .......+.-++..||++...+. + ..++..+-++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~-~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~--- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLD-EARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV--- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHH-HHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC---
Confidence 47788999998653 666666 43333334458889999976654 2 134444444432
Q ss_pred CceEEeccCCccc
Q 010977 282 HRVYLLRGNHETK 294 (496)
Q Consensus 282 ~~V~lLRGNHE~~ 294 (496)
. .+..||||.-
T Consensus 78 -D-a~t~GNHefd 88 (288)
T cd07412 78 -D-ASAVGNHEFD 88 (288)
T ss_pred -e-eeeecccccc
Confidence 2 3555999953
No 94
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=91.93 E-value=0.24 Score=49.82 Aligned_cols=66 Identities=17% Similarity=0.214 Sum_probs=36.7
Q ss_pred ceEEEccCcCcHH----------------HHHHHHHHhcCCCCCCceEEEecCcccCCCCcH-----------HHHHHHH
Q 010977 222 EVIVVGDILGQFH----------------DLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----------EVLLVLL 274 (496)
Q Consensus 222 ~i~VVGDIHG~~~----------------dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-----------EvL~lL~ 274 (496)
+|+..+|+||++. .+..+++ .......+.-++..||+++..+.+- .++..+-
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~-~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln 80 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIK-KARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMN 80 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHH-HHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHH
Confidence 4778899999973 3555665 3322222232233799998655321 2333433
Q ss_pred HhhhhCCCceEEeccCCcc
Q 010977 275 AWKVLMPHRVYLLRGNHET 293 (496)
Q Consensus 275 ~LK~~~P~~V~lLRGNHE~ 293 (496)
.+ -+ -++..||||.
T Consensus 81 ~~---g~--d~~~lGNHe~ 94 (277)
T cd07410 81 AL---GY--DAGTLGNHEF 94 (277)
T ss_pred hc---CC--CEEeecccCc
Confidence 33 22 2555699995
No 95
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=91.55 E-value=0.2 Score=49.85 Aligned_cols=74 Identities=18% Similarity=0.234 Sum_probs=42.6
Q ss_pred CceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcH-------------------------HHHHHHHH
Q 010977 221 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-------------------------EVLLVLLA 275 (496)
Q Consensus 221 ~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-------------------------EvL~lL~~ 275 (496)
.++..++|.||+++.|.++.+ .+.....+. ++|+||++-.+..+- |.+.-.+.
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~-~~~e~~~D~-~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~ 83 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVE-VIPEKGPDA-VVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFR 83 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHH-HHHHHT-SE-EEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHh-hccccCCCE-EEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHH
Confidence 479999999999999999988 554444444 999999986444333 33333333
Q ss_pred hhhhCCCceEEeccCCccccc
Q 010977 276 WKVLMPHRVYLLRGNHETKNC 296 (496)
Q Consensus 276 LK~~~P~~V~lLRGNHE~~~l 296 (496)
.--..+--+++++||||....
T Consensus 84 ~L~~~~~p~~~vPG~~Dap~~ 104 (255)
T PF14582_consen 84 ILGELGVPVFVVPGNMDAPER 104 (255)
T ss_dssp HHHCC-SEEEEE--TTS-SHH
T ss_pred HHHhcCCcEEEecCCCCchHH
Confidence 222344479999999998653
No 96
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=89.69 E-value=0.63 Score=46.33 Aligned_cols=71 Identities=17% Similarity=0.220 Sum_probs=39.4
Q ss_pred ceEEEccCcCc--H--HHHHHHHHHhcCCCCCCceEEEecCcc-cCCCCcH------HHHHHHHHhhhhCCCceEEeccC
Q 010977 222 EVIVVGDILGQ--F--HDLVALFEENAGFPSDHRYFVFNGNYV-DKGSWGL------EVLLVLLAWKVLMPHRVYLLRGN 290 (496)
Q Consensus 222 ~i~VVGDIHG~--~--~dL~~il~~~~g~p~~~~~~VFLGDyV-DRG~~Sl------EvL~lL~~LK~~~P~~V~lLRGN 290 (496)
+++++||.=.. . ..+.+.+.+.+.... .+-+|++||+| +-|..+. +.+..++.. ....--++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~-~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELG-PDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcC-CCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCC
Confidence 57899998653 1 334444432333232 34499999987 5564221 222222221 1122359999999
Q ss_pred Cccc
Q 010977 291 HETK 294 (496)
Q Consensus 291 HE~~ 294 (496)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9976
No 97
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=88.74 E-value=0.58 Score=46.67 Aligned_cols=65 Identities=18% Similarity=0.211 Sum_probs=38.1
Q ss_pred ceEEEccCcCcH----------HHHHHHHHHhcCCCCCCceEEEecCcccCCCCcH-----HHHHHHHHhhhhCCCceEE
Q 010977 222 EVIVVGDILGQF----------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----EVLLVLLAWKVLMPHRVYL 286 (496)
Q Consensus 222 ~i~VVGDIHG~~----------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-----EvL~lL~~LK~~~P~~V~l 286 (496)
+++-+.|+||++ ..+..+++ ..... .+.-++..||+++..+.+. .++..+-.+ -. .+ +
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~-~~~~~-~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~---g~-d~-~ 74 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKK-EMNKL-DNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV---GY-DA-V 74 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHH-HHHhc-CCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc---CC-cE-E
Confidence 467889999985 34566666 33222 3455778999998765432 222233222 11 33 4
Q ss_pred eccCCcc
Q 010977 287 LRGNHET 293 (496)
Q Consensus 287 LRGNHE~ 293 (496)
..||||.
T Consensus 75 ~~GNHef 81 (257)
T cd07408 75 TPGNHEF 81 (257)
T ss_pred ccccccc
Confidence 5699995
No 98
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=87.62 E-value=0.93 Score=45.42 Aligned_cols=65 Identities=15% Similarity=0.215 Sum_probs=35.4
Q ss_pred eEEEccCcCcHHH----------------------HHHHHHHhcCCC-CCCceEEEecCcccCCCCcH-----HHHHHHH
Q 010977 223 VIVVGDILGQFHD----------------------LVALFEENAGFP-SDHRYFVFNGNYVDKGSWGL-----EVLLVLL 274 (496)
Q Consensus 223 i~VVGDIHG~~~d----------------------L~~il~~~~g~p-~~~~~~VFLGDyVDRG~~Sl-----EvL~lL~ 274 (496)
++-+.|+||++.. +..+++ ..... ..+..++..||+++..+.+. .++..+-
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~-~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIK-RIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHH-HHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 6677888887533 344454 32211 23333456999998776442 2333333
Q ss_pred HhhhhCCCceEEeccCCccc
Q 010977 275 AWKVLMPHRVYLLRGNHETK 294 (496)
Q Consensus 275 ~LK~~~P~~V~lLRGNHE~~ 294 (496)
. .+ --.+. ||||..
T Consensus 82 ~----~g-~da~~-GNHefd 95 (264)
T cd07411 82 A----LG-VDAMV-GHWEFT 95 (264)
T ss_pred h----hC-CeEEe-cccccc
Confidence 3 22 22334 999953
No 99
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=86.63 E-value=7 Score=36.78 Aligned_cols=62 Identities=26% Similarity=0.363 Sum_probs=47.0
Q ss_pred eEEEccCcC--cHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCccc
Q 010977 223 VIVVGDILG--QFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (496)
Q Consensus 223 i~VVGDIHG--~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~ 294 (496)
+.|+||+|= ...+|-.-|+ +.=.|.+-.+++++|+.. |.|+..+|-.+- +.++++||--+..
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFk-klLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~ 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFK-KLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN 66 (183)
T ss_pred EEEeccccCCccccccCHHHH-hccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc
Confidence 678999983 4566767777 555677777899999975 778899886553 4899999987653
No 100
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=84.55 E-value=2.1 Score=43.45 Aligned_cols=67 Identities=16% Similarity=0.177 Sum_probs=36.6
Q ss_pred ceEEEccCcCcH---------------------HHHHHHHHHhcCCCCCCceEEEecCcccCCCCc-----HHHHHHHHH
Q 010977 222 EVIVVGDILGQF---------------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLA 275 (496)
Q Consensus 222 ~i~VVGDIHG~~---------------------~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S-----lEvL~lL~~ 275 (496)
+++-++|+||++ ..+..+++ .......+.-++..||+++..+.+ ...+..+-.
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~-~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~ 80 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVK-ELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNL 80 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHH-HHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHh
Confidence 367789999875 33455555 322222333355589999876543 222333322
Q ss_pred hhhhCCCceEEeccCCccc
Q 010977 276 WKVLMPHRVYLLRGNHETK 294 (496)
Q Consensus 276 LK~~~P~~V~lLRGNHE~~ 294 (496)
.-. .+. ..||||..
T Consensus 81 ---~g~-D~~-~lGNHefd 94 (281)
T cd07409 81 ---LGY-DAM-TLGNHEFD 94 (281)
T ss_pred ---cCC-CEE-Eecccccc
Confidence 222 333 45999963
No 101
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=84.45 E-value=1.9 Score=43.86 Aligned_cols=69 Identities=17% Similarity=0.224 Sum_probs=47.9
Q ss_pred CceEEEccCcCc--HHHHHHHHHHhcCCCCCCceEEEecCcccCC-CCcHHHHHHHHHhhhhCCCceEEeccCCcccc
Q 010977 221 SEVIVVGDILGQ--FHDLVALFEENAGFPSDHRYFVFNGNYVDKG-SWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (496)
Q Consensus 221 ~~i~VVGDIHG~--~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG-~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ 295 (496)
+++.++|||=|. ...|...|. ........+-.|.+||...-| .-+-++...|..+-. .++.+ |||+...
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~-~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv----DviT~-GNH~~Dk 72 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLP-QLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGV----NYITM-GNHTWFQ 72 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHH-HHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCC----CEEEc-cchhccC
Confidence 478999999999 455666666 433333345477799999766 456778888875543 56666 9998753
No 102
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=84.10 E-value=1.9 Score=45.61 Aligned_cols=74 Identities=15% Similarity=0.273 Sum_probs=45.6
Q ss_pred CceEEEccCcCcHHHHHHHHHH--hcCCCCCCceEEEecCccc-CCCC---c---------HHHHHHHHHhhhhCCCceE
Q 010977 221 SEVIVVGDILGQFHDLVALFEE--NAGFPSDHRYFVFNGNYVD-KGSW---G---------LEVLLVLLAWKVLMPHRVY 285 (496)
Q Consensus 221 ~~i~VVGDIHG~~~dL~~il~~--~~g~p~~~~~~VFLGDyVD-RG~~---S---------lEvL~lL~~LK~~~P~~V~ 285 (496)
++|.|=|=-||+++.+-+-+.- ..|-. +-+-+++.||+=. |... | +..+.--+.-....|=-..
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~t-kVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTI 79 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNT-KVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTI 79 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCC-CccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEE
Confidence 4788999999999988754430 33322 3455999999852 2211 1 2222222333345666677
Q ss_pred EeccCCcccc
Q 010977 286 LLRGNHETKN 295 (496)
Q Consensus 286 lLRGNHE~~~ 295 (496)
++-||||.+.
T Consensus 80 FIGGNHEAsn 89 (456)
T KOG2863|consen 80 FIGGNHEASN 89 (456)
T ss_pred EecCchHHHH
Confidence 8999999865
No 103
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=82.77 E-value=1.9 Score=48.53 Aligned_cols=42 Identities=19% Similarity=0.200 Sum_probs=35.8
Q ss_pred ceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccccc
Q 010977 251 RYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCT 297 (496)
Q Consensus 251 ~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln 297 (496)
+++-.+||+.||||.+--++..|+ .|| +|=+--||||--.|.
T Consensus 186 DhLHIvGDIyDRGp~pd~ImD~Lm----~~h-svDIQWGNHDIlWMG 227 (640)
T PF06874_consen 186 DHLHIVGDIYDRGPRPDKIMDRLM----NYH-SVDIQWGNHDILWMG 227 (640)
T ss_pred hheeecccccCCCCChhHHHHHHh----cCC-CccccccchHHHHHH
Confidence 448899999999999999999997 344 889999999987654
No 104
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.69 E-value=2.9 Score=45.43 Aligned_cols=71 Identities=23% Similarity=0.376 Sum_probs=52.9
Q ss_pred CCceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCC
Q 010977 220 DSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 291 (496)
Q Consensus 220 ~~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNH 291 (496)
+.+|.||||.-|++..|.+-.+........=+-++++|++.+--.++-|++.+...-+ ..|--+|++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 3689999999999999988777232222223458999999987677788888776554 5676788887765
No 105
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=81.59 E-value=3.6 Score=41.62 Aligned_cols=64 Identities=17% Similarity=0.209 Sum_probs=36.5
Q ss_pred HHHHHHHHHhcCCCCCCceEEEecCcccCCCCcH--H------HHHHHHHhhhhCCC-ceEEeccCCcccccc
Q 010977 234 HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL--E------VLLVLLAWKVLMPH-RVYLLRGNHETKNCT 297 (496)
Q Consensus 234 ~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl--E------vL~lL~~LK~~~P~-~V~lLRGNHE~~~ln 297 (496)
..+...++......++-+-+|+.||+++.+.... + .-.+.-.++..+|+ -|+...||||....+
T Consensus 53 ~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~ 125 (296)
T cd00842 53 RLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVN 125 (296)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCccc
Confidence 4455555522222123345899999998876531 1 11222334444453 599999999986543
No 106
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=80.06 E-value=3.3 Score=40.11 Aligned_cols=47 Identities=21% Similarity=0.181 Sum_probs=31.6
Q ss_pred CCCCCCceEEEecCccc--CCCCcHHHHHHHHHhhhhCCCceEEeccCCcccc
Q 010977 245 GFPSDHRYFVFNGNYVD--KGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 295 (496)
Q Consensus 245 g~p~~~~~~VFLGDyVD--RG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ 295 (496)
+.-+..+.++.-||+-- |=++..+-+.++= .-|+.=+++||||+...
T Consensus 39 ~~v~~eDiVllpGDiSWaM~l~ea~~Dl~~i~----~LPG~K~m~rGNHDYWw 87 (230)
T COG1768 39 SKVSPEDIVLLPGDISWAMRLEEAEEDLRFIG----DLPGTKYMIRGNHDYWW 87 (230)
T ss_pred hcCChhhEEEecccchhheechhhhhhhhhhh----cCCCcEEEEecCCcccc
Confidence 33445665788899852 3344455555554 34999999999999764
No 107
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=78.66 E-value=2.6 Score=51.13 Aligned_cols=67 Identities=16% Similarity=0.147 Sum_probs=39.1
Q ss_pred CceEEEccCcCcH---HHHHHHHHHhcCCCCCCceEEEecCcccCCCCcH-----HHHHHHHHhhhhCCCceEEeccCCc
Q 010977 221 SEVIVVGDILGQF---HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----EVLLVLLAWKVLMPHRVYLLRGNHE 292 (496)
Q Consensus 221 ~~i~VVGDIHG~~---~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-----EvL~lL~~LK~~~P~~V~lLRGNHE 292 (496)
-+++.++|+||++ ..+..+++ .......+.-++..||+++..+.+. .++..+-.+ +--+...||||
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~-~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~l-----g~d~~~~GNHE 734 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIK-EVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEM-----GYDASTFGNHE 734 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHH-HHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCc-----CCCEEEecccc
Confidence 3678899999985 44444555 2221122332344899998776542 334443332 23356899999
Q ss_pred c
Q 010977 293 T 293 (496)
Q Consensus 293 ~ 293 (496)
.
T Consensus 735 f 735 (1163)
T PRK09419 735 F 735 (1163)
T ss_pred c
Confidence 6
No 108
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=76.38 E-value=3.3 Score=42.38 Aligned_cols=68 Identities=19% Similarity=0.135 Sum_probs=37.1
Q ss_pred ceEEEccCcCcHH----------------HHHHHHHHhcCCCCCCceEEEecCcccCCCCcHH-------HHHHHHHhhh
Q 010977 222 EVIVVGDILGQFH----------------DLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLE-------VLLVLLAWKV 278 (496)
Q Consensus 222 ~i~VVGDIHG~~~----------------dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlE-------vL~lL~~LK~ 278 (496)
+|+-..|+||++. .+.+.+++......++.-++..||++..-+.+-- .+.++-.+
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~m-- 84 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMM-- 84 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhc--
Confidence 5777899999864 2222232122222223345669999976544321 23333333
Q ss_pred hCCCceEEeccCCccc
Q 010977 279 LMPHRVYLLRGNHETK 294 (496)
Q Consensus 279 ~~P~~V~lLRGNHE~~ 294 (496)
+-=.+..||||..
T Consensus 85 ---gyDa~tlGNHEFd 97 (282)
T cd07407 85 ---PYDLLTIGNHELY 97 (282)
T ss_pred ---CCcEEeecccccC
Confidence 2446778999984
No 109
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=76.36 E-value=11 Score=41.49 Aligned_cols=77 Identities=23% Similarity=0.340 Sum_probs=42.1
Q ss_pred CceEEEccCcC-cHHHH----HHHHHHhcCCC---CCCceEEEecCcccC-CCC-----------cHHHHHHHHHhhhhC
Q 010977 221 SEVIVVGDILG-QFHDL----VALFEENAGFP---SDHRYFVFNGNYVDK-GSW-----------GLEVLLVLLAWKVLM 280 (496)
Q Consensus 221 ~~i~VVGDIHG-~~~dL----~~il~~~~g~p---~~~~~~VFLGDyVDR-G~~-----------SlEvL~lL~~LK~~~ 280 (496)
-.+..++|+|= .-.-+ ...++...|.. +.-.-++..||.||. |-+ ..|-...+..+--+-
T Consensus 226 v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~v 305 (481)
T COG1311 226 VYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQV 305 (481)
T ss_pred eEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhC
Confidence 35889999995 33333 33333112221 122446668899994 322 122333333333344
Q ss_pred CC--ceEEeccCCcccccc
Q 010977 281 PH--RVYLLRGNHETKNCT 297 (496)
Q Consensus 281 P~--~V~lLRGNHE~~~ln 297 (496)
|. .|++.+|||+..-..
T Consensus 306 p~~I~v~i~PGnhDa~r~a 324 (481)
T COG1311 306 PEHIKVFIMPGNHDAVRQA 324 (481)
T ss_pred CCCceEEEecCCCCccccc
Confidence 54 588899999987654
No 110
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=74.22 E-value=5.9 Score=39.55 Aligned_cols=57 Identities=19% Similarity=0.193 Sum_probs=35.0
Q ss_pred CcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCc-----HHHHHHHHHhhhhCCCceEEeccCCcc
Q 010977 231 GQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPHRVYLLRGNHET 293 (496)
Q Consensus 231 G~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S-----lEvL~lL~~LK~~~P~~V~lLRGNHE~ 293 (496)
|.+.-+..+++ .......+.-++..||+++.++.+ ..++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~-~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRK-QLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHH-HHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 45677777777 433333344588899999877532 34444444332 23557899995
No 111
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=72.73 E-value=8 Score=39.11 Aligned_cols=67 Identities=21% Similarity=0.305 Sum_probs=43.5
Q ss_pred ceEEEccCcCcHH--HHHHHHHHhcCCCCCCceEEEecCcccCC-CCcHHHHHHHHHhhhhCCCceEEeccCCccc
Q 010977 222 EVIVVGDILGQFH--DLVALFEENAGFPSDHRYFVFNGNYVDKG-SWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (496)
Q Consensus 222 ~i~VVGDIHG~~~--dL~~il~~~~g~p~~~~~~VFLGDyVDRG-~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~ 294 (496)
++.++|||=|..- .+...+. ........+-+|-+||..--| .-+-++...|..+.. .+..+ ||||..
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~-~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLP-KLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHH-HHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccC
Confidence 4789999999863 3455555 332222334467799998766 367778887776643 45554 999754
No 112
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=67.29 E-value=6.7 Score=39.94 Aligned_cols=67 Identities=13% Similarity=0.066 Sum_probs=35.0
Q ss_pred ceEEEccCcCcHHH----------HHHHHHHhcCC----CCCCceEEEecCcccCCCCc-----HHHHHHHHHhhhhCCC
Q 010977 222 EVIVVGDILGQFHD----------LVALFEENAGF----PSDHRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPH 282 (496)
Q Consensus 222 ~i~VVGDIHG~~~d----------L~~il~~~~g~----p~~~~~~VFLGDyVDRG~~S-----lEvL~lL~~LK~~~P~ 282 (496)
.|+-..|+||++.. +..+++ .... ...+.-++-.||++...+.+ .-++.++-++..
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~-~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~---- 76 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVD-GVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY---- 76 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHH-HHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCC----
Confidence 36778999998633 444444 2211 12233466699998432322 222333333322
Q ss_pred ceEEeccCCccc
Q 010977 283 RVYLLRGNHETK 294 (496)
Q Consensus 283 ~V~lLRGNHE~~ 294 (496)
.+. ..||||.-
T Consensus 77 Da~-~~GNHEfD 87 (285)
T cd07405 77 DAM-AVGNHEFD 87 (285)
T ss_pred cEE-eecccccc
Confidence 333 44999953
No 113
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=64.89 E-value=4.9 Score=43.86 Aligned_cols=41 Identities=20% Similarity=0.276 Sum_probs=33.9
Q ss_pred ceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCccccc
Q 010977 251 RYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNC 296 (496)
Q Consensus 251 ~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~l 296 (496)
+++=.+||+-||||++-.++..|. .|+ .+-+--|||+--.|
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~----~yh-svDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLI----NYH-SVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHh----hcc-cccccccCcceEEe
Confidence 447789999999999999999886 444 78888999998664
No 114
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=62.32 E-value=11 Score=43.16 Aligned_cols=66 Identities=20% Similarity=0.220 Sum_probs=40.1
Q ss_pred ceEEEccCcCcHHH----------------HHHHHHHhcCCCCCCceEEEecCcccCCCCcH-------------HHHHH
Q 010977 222 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-------------EVLLV 272 (496)
Q Consensus 222 ~i~VVGDIHG~~~d----------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-------------EvL~l 272 (496)
+|+-..|+||++.. +..+++ .......+..+|-.||++...+.+- -++..
T Consensus 27 ~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~-~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~a 105 (649)
T PRK09420 27 RIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIK-AARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYKA 105 (649)
T ss_pred EEEEEcccccCccCCccccCCcccccCHHHHHHHHH-HHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHHH
Confidence 57889999999743 334444 3222223345777999997665431 13444
Q ss_pred HHHhhhhCCCceEEeccCCcc
Q 010977 273 LLAWKVLMPHRVYLLRGNHET 293 (496)
Q Consensus 273 L~~LK~~~P~~V~lLRGNHE~ 293 (496)
+-.|. -=....||||.
T Consensus 106 mN~lg-----yDa~tlGNHEF 121 (649)
T PRK09420 106 MNTLD-----YDVGNLGNHEF 121 (649)
T ss_pred HHhcC-----CcEEeccchhh
Confidence 44443 34667899995
No 115
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=61.37 E-value=13 Score=38.57 Aligned_cols=65 Identities=22% Similarity=0.220 Sum_probs=37.6
Q ss_pred eEEEccCcCcHH------HHHHHHHHhcCCC----CCCceEEEecCcccCCCC-------------cHHHHHHHHHhhhh
Q 010977 223 VIVVGDILGQFH------DLVALFEENAGFP----SDHRYFVFNGNYVDKGSW-------------GLEVLLVLLAWKVL 279 (496)
Q Consensus 223 i~VVGDIHG~~~------dL~~il~~~~g~p----~~~~~~VFLGDyVDRG~~-------------SlEvL~lL~~LK~~ 279 (496)
|+-..|+||++. .+..+++ ..... .++.-++..||.+.-++. ..-++.++-++.
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~-~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g-- 79 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVN-ALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG-- 79 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHH-HHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC--
Confidence 566789999963 3444444 22111 223457779999876543 223344444443
Q ss_pred CCCceEEeccCCcc
Q 010977 280 MPHRVYLLRGNHET 293 (496)
Q Consensus 280 ~P~~V~lLRGNHE~ 293 (496)
-=.+..||||.
T Consensus 80 ---~Da~tlGNHEF 90 (313)
T cd08162 80 ---VQAIALGNHEF 90 (313)
T ss_pred ---CcEEecccccc
Confidence 33567899995
No 116
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=60.73 E-value=11 Score=41.59 Aligned_cols=68 Identities=15% Similarity=0.214 Sum_probs=40.3
Q ss_pred ceEEEccCcCcHH---------------HHHHHHHHhcCCCCCCceEEEecCcccCCCCc------HHHHHHHHHhhhhC
Q 010977 222 EVIVVGDILGQFH---------------DLVALFEENAGFPSDHRYFVFNGNYVDKGSWG------LEVLLVLLAWKVLM 280 (496)
Q Consensus 222 ~i~VVGDIHG~~~---------------dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~S------lEvL~lL~~LK~~~ 280 (496)
+++-..|+||++. ....+++ ...-...+.-+|=.||+++..+-+ .-.+.+|-.++
T Consensus 28 ~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~-~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~--- 103 (517)
T COG0737 28 TILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVK-QLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG--- 103 (517)
T ss_pred EEEEeccccccceeccccccCcccccHHHHHHHHH-HHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC---
Confidence 4778899999998 2333333 221112233355699999984433 33455555554
Q ss_pred CCceEEeccCCcccc
Q 010977 281 PHRVYLLRGNHETKN 295 (496)
Q Consensus 281 P~~V~lLRGNHE~~~ 295 (496)
-=.+..||||.-.
T Consensus 104 --yDa~tiGNHEFd~ 116 (517)
T COG0737 104 --YDAMTLGNHEFDY 116 (517)
T ss_pred --CcEEeeccccccc
Confidence 2356679999744
No 117
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=60.08 E-value=17 Score=34.68 Aligned_cols=73 Identities=15% Similarity=0.199 Sum_probs=35.8
Q ss_pred eEEEccCcCc-----HHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcH------------H-HHHHHHHhhhh--CCC
Q 010977 223 VIVVGDILGQ-----FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL------------E-VLLVLLAWKVL--MPH 282 (496)
Q Consensus 223 i~VVGDIHG~-----~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl------------E-vL~lL~~LK~~--~P~ 282 (496)
|++++|+|=. +..|..+|. .......-..+|++|+++|.-.... + .+..+...... .--
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~-~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 79 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLS-GVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPST 79 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHH-CCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCS
T ss_pred CEEEecCccCCCHhHHHHHHHHHH-hccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhccccc
Confidence 4566666644 566777777 4431122345999999999622221 1 11111111111 124
Q ss_pred ceEEeccCCccccc
Q 010977 283 RVYLLRGNHETKNC 296 (496)
Q Consensus 283 ~V~lLRGNHE~~~l 296 (496)
+|+++.|+||-...
T Consensus 80 ~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 80 QVVLVPGPNDPTSS 93 (209)
T ss_dssp EEEEE--TTCTT-S
T ss_pred EEEEeCCCcccccc
Confidence 79999999997654
No 118
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=58.01 E-value=13 Score=42.19 Aligned_cols=66 Identities=21% Similarity=0.214 Sum_probs=38.6
Q ss_pred ceEEEccCcCcHHH----------------HHHHHHHhcCCCCCCceEEEecCcccCCCCcH-------------HHHHH
Q 010977 222 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-------------EVLLV 272 (496)
Q Consensus 222 ~i~VVGDIHG~~~d----------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl-------------EvL~l 272 (496)
+|+-..|+||++.. +..+++ .......+.-+|-.||.+...+.+- -++..
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~-~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIK-QARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHH-HHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 57788999999743 334444 2222223345777999998655431 13333
Q ss_pred HHHhhhhCCCceEEeccCCcc
Q 010977 273 LLAWKVLMPHRVYLLRGNHET 293 (496)
Q Consensus 273 L~~LK~~~P~~V~lLRGNHE~ 293 (496)
+-.|. -=....||||.
T Consensus 83 mN~lg-----yDa~tlGNHEF 98 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEF 98 (626)
T ss_pred HhhcC-----ccEEecccccc
Confidence 33332 33567899994
No 119
>PRK09983 pflD putative formate acetyltransferase 2; Provisional
Probab=56.69 E-value=16 Score=42.71 Aligned_cols=117 Identities=11% Similarity=0.028 Sum_probs=70.7
Q ss_pred cchhhHHHHHHHhhhhhhhhhhhHHHHHhhhhccCCCchhHHHHHHHHHHHhhhhhhh--hhhhHHhhhhhhhhhhhccc
Q 010977 55 VTEADAEQLWCSSVDGVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVSKQ--RVFDSSLQGLLEELQVEVGS 132 (496)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~i~~~--~~fe~ai~~~~~~~~~~~~~ 132 (496)
.++++.-++..-+++.|..-+++--+++..+.=++-|..+|++|++| +..|++|+.+ +-|.+|+|..-=-+-.-..+
T Consensus 183 ~~~~~fy~a~~i~~~av~~~a~Rya~lA~~~a~~e~d~~rk~EL~~i-A~~c~~vp~~pa~tF~EAlQ~~wf~~l~~~~e 261 (765)
T PRK09983 183 QPENHFYQAALLLLEASQKHILRYAELAETMAANCTDAQRREELLTI-AEISRHNAQHKPQTFWQACQLFWYMNIILQYE 261 (765)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHH-HHHhccCcccCCCCHHHHHHHHHHHHHHHHHh
Confidence 44567777777788888888888888887777677777777776655 5679999766 56999999531110000011
Q ss_pred hhhhhccCCCccCcccCCCCCCCCCCCCCCCCHHHHHHHHHHhh
Q 010977 133 TMRERLVGGKLENLTKEQDTLPLSWPRNGRISLEWIQLLISTFK 176 (496)
Q Consensus 133 ~~~~~~~g~~~e~~~~~~~~~~l~~P~~~~~t~~~i~~l~~~~~ 176 (496)
+....+.-|.++..=.|.=-.-+ ++| +|.+..++|++.|.
T Consensus 262 ~ng~~~s~GR~Dq~L~Pyy~~Dl---~~G-~t~e~A~Ell~~~~ 301 (765)
T PRK09983 262 SNASSLSLGRFDQYMLPFYQASL---TQG-EDPAFLKELLESLW 301 (765)
T ss_pred cCccccCCCcHHHHHHHHHHHHH---HcC-CCHHHHHHHHHHHH
Confidence 11122222333322221100012 356 79999999999764
No 120
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=53.68 E-value=20 Score=40.08 Aligned_cols=40 Identities=15% Similarity=0.085 Sum_probs=23.9
Q ss_pred CceEEEecCcccCCCCc-----HHHHHHHHHhhhhCCCceEEeccCCccc
Q 010977 250 HRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPHRVYLLRGNHETK 294 (496)
Q Consensus 250 ~~~~VFLGDyVDRG~~S-----lEvL~lL~~LK~~~P~~V~lLRGNHE~~ 294 (496)
+.-++..||++...+.+ ...+.++-++ +--....||||.-
T Consensus 50 n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~-----g~Da~~lGNHEFd 94 (550)
T TIGR01530 50 NALVLHAGDAIIGTLYFTLFGGRADAALMNAA-----GFDFFTLGNHEFD 94 (550)
T ss_pred CeEEEECCCCCCCccchhhcCCHHHHHHHhcc-----CCCEEEecccccc
Confidence 34577899998755433 2233333333 3456788999953
No 121
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=53.37 E-value=16 Score=44.54 Aligned_cols=42 Identities=19% Similarity=0.386 Sum_probs=25.4
Q ss_pred ceEEEccCcCcHH----------------HHHHHHHHhcCCCCCCceEEEecCcccCCC
Q 010977 222 EVIVVGDILGQFH----------------DLVALFEENAGFPSDHRYFVFNGNYVDKGS 264 (496)
Q Consensus 222 ~i~VVGDIHG~~~----------------dL~~il~~~~g~p~~~~~~VFLGDyVDRG~ 264 (496)
+|+-..|+||++. .+..+++ .......+.-+|-.||++...+
T Consensus 43 ~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~-~~r~~~~n~llld~GD~~qGs~ 100 (1163)
T PRK09419 43 QILATTDLHGNFMDYDYASDKETTGFGLAQTATLIK-KARKENPNTLLVDNGDLIQGNP 100 (1163)
T ss_pred EEEEEecccccccccccccCCCCCCcCHHHHHHHHH-HHHHhCCCeEEEeCCCccCCCh
Confidence 5888999999863 2344444 2222222333444999998665
No 122
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=50.03 E-value=47 Score=34.44 Aligned_cols=75 Identities=13% Similarity=0.177 Sum_probs=47.9
Q ss_pred CCCceEEEccCc----CcHHHHHHHHHHhc-C-CCC--CCceEEEecCcccCC----CCc----HHHHHHHHHh-hhhCC
Q 010977 219 EDSEVIVVGDIL----GQFHDLVALFEENA-G-FPS--DHRYFVFNGNYVDKG----SWG----LEVLLVLLAW-KVLMP 281 (496)
Q Consensus 219 ~~~~i~VVGDIH----G~~~dL~~il~~~~-g-~p~--~~~~~VFLGDyVDRG----~~S----lEvL~lL~~L-K~~~P 281 (496)
...+++|.||+| -.++.|.++|+ .. . .+. ....+||.|+++-+. ..+ .|-+.-|..+ ...||
T Consensus 26 ~~~~~VilSDV~LD~p~tl~~L~kvf~-~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp 104 (291)
T PTZ00235 26 KRHNWIIMHDVYLDSPYTFEVLDKMLS-LYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFK 104 (291)
T ss_pred CceEEEEEEeeccCCHHHHHHHHHHHH-HhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhCh
Confidence 446799999998 55677888887 33 1 121 133599999998652 222 2334444432 33455
Q ss_pred -----CceEEeccCCccc
Q 010977 282 -----HRVYLLRGNHETK 294 (496)
Q Consensus 282 -----~~V~lLRGNHE~~ 294 (496)
.++++++|-.|-.
T Consensus 105 ~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 105 LILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHHhcCeEEEECCCCCCC
Confidence 6899999999963
No 123
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=49.83 E-value=22 Score=41.75 Aligned_cols=66 Identities=21% Similarity=0.192 Sum_probs=38.8
Q ss_pred ceEEEccCcCcHHH----------------HHHHHHHhcCCCCCCceEEEecCcccCCCCcH--------------HHHH
Q 010977 222 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGSWGL--------------EVLL 271 (496)
Q Consensus 222 ~i~VVGDIHG~~~d----------------L~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl--------------EvL~ 271 (496)
+|+-..|+||++.. +..+++ .......+..+|..||++..-+.+- -++.
T Consensus 117 tIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~-~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 117 RILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIE-EAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEeecCCcccccccccCccccccHHHHHHHHH-HHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 57788999999643 233344 2222223345777999997654421 1344
Q ss_pred HHHHhhhhCCCceEEeccCCcc
Q 010977 272 VLLAWKVLMPHRVYLLRGNHET 293 (496)
Q Consensus 272 lL~~LK~~~P~~V~lLRGNHE~ 293 (496)
.+-.|. .=....||||.
T Consensus 196 amN~LG-----yDA~tLGNHEF 212 (814)
T PRK11907 196 ALEALG-----FDAGTLGNHEF 212 (814)
T ss_pred HHhccC-----CCEEEechhhc
Confidence 444443 34677899995
No 124
>cd01677 PFL2_DhaB_BssA Pyruvate formate lyase 2 and related enzymes. This family includes pyruvate formate lyase 2 (PFL2), B12-independent glycerol dehydratase (DhaB) and the alpha subunit of benzylsuccinate synthase (BssA), all of which have a highly conserved ten-stranded alpha/beta barrel domain, which is similar to those of PFL1 (pyruvate formate lyase 1) and RNR (ribonucleotide reductase). Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. DhaB catalyzes the first step in the conversion of glycerol to 1,3-propanediol while BssA catalyzes the first step in the anaerobic mineralization of both toluene and m-xylene.
Probab=49.43 E-value=23 Score=41.50 Aligned_cols=116 Identities=17% Similarity=0.168 Sum_probs=68.4
Q ss_pred hhhHHHHHHHhhhhhhhhhhhHHHHHhhhhccCCCchhHHHHHHHHHHHhhhhhhh--hhhhHHhhhhhhhhhhhccchh
Q 010977 57 EADAEQLWCSSVDGVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVSKQ--RVFDSSLQGLLEELQVEVGSTM 134 (496)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~i~~~--~~fe~ai~~~~~~~~~~~~~~~ 134 (496)
+.+.-++..-+++.|+.-+++--+++.++.=+.-|..+|++|++ +...|++|+.+ +-|.+|+|...=-+-....++.
T Consensus 192 k~~fy~A~~i~~~av~~~a~Rya~la~e~A~~e~d~~rk~EL~~-iA~~c~~vp~~pp~tf~EAlQ~~~~~~l~~~~e~n 270 (781)
T cd01677 192 KIYFYQAMIIVCEAVITYAKRYAELAKELAAKETDPKRKAELLE-IAEICRRVPAHPPRTFWEALQSFWFIHLILQIESN 270 (781)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHH-HHHHhccCcCCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 34455666667788888888888888887766656666666555 56789999766 5699999953211000000111
Q ss_pred hhhccCCCccCcccCCCCCCCCCCCCCCCCHHHHHHHHHHhh
Q 010977 135 RERLVGGKLENLTKEQDTLPLSWPRNGRISLEWIQLLISTFK 176 (496)
Q Consensus 135 ~~~~~g~~~e~~~~~~~~~~l~~P~~~~~t~~~i~~l~~~~~ 176 (496)
...+.-|.++..=.|.=-.-+ ++|.+|.+...+|++.|.
T Consensus 271 ~~~~s~GR~Dq~L~Pyy~~Dl---~~G~it~eeA~Ell~~f~ 309 (781)
T cd01677 271 GHSISPGRFDQYLYPFYKQDI---EEGRLTREGAIELLECLW 309 (781)
T ss_pred CcccCCCcHHHHHHHHHHhHH---hcCCCCHHHHHHHHHHHH
Confidence 111112233222221101113 578899999999999763
No 125
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=49.38 E-value=29 Score=37.43 Aligned_cols=73 Identities=12% Similarity=0.123 Sum_probs=41.0
Q ss_pred CceEEEccCc-CcHHHH--HHHHHHhcCCCCCCceEEEecCcccCCCCcH------HHHHHHHHhhh-hCCCceEEeccC
Q 010977 221 SEVIVVGDIL-GQFHDL--VALFEENAGFPSDHRYFVFNGNYVDKGSWGL------EVLLVLLAWKV-LMPHRVYLLRGN 290 (496)
Q Consensus 221 ~~i~VVGDIH-G~~~dL--~~il~~~~g~p~~~~~~VFLGDyVDRG~~Sl------EvL~lL~~LK~-~~P~~V~lLRGN 290 (496)
-+++++||-= |.+... .+.+. ..+....-+-+|-+||-++-|..|+ +.++-++.-.. ...--++++.||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~-~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGN 105 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLK-QYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQ 105 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHH-HHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCc
Confidence 4799999953 322221 12222 1222223344888999888887764 33444542221 001258999999
Q ss_pred Cccc
Q 010977 291 HETK 294 (496)
Q Consensus 291 HE~~ 294 (496)
||..
T Consensus 106 HDy~ 109 (394)
T PTZ00422 106 ADWD 109 (394)
T ss_pred cccc
Confidence 9974
No 126
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=49.14 E-value=27 Score=36.00 Aligned_cols=67 Identities=18% Similarity=0.238 Sum_probs=42.2
Q ss_pred CCCceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCC-CceEEeccCCcccc
Q 010977 219 EDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMP-HRVYLLRGNHETKN 295 (496)
Q Consensus 219 ~~~~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P-~~V~lLRGNHE~~~ 295 (496)
...+++.++|.|+...+ +...|+ .+.++-+||+-.-|. +-||.-+=-.+ -..| .+=+.++||||..+
T Consensus 60 ~~~r~VcisdtH~~~~~-------i~~~p~-gDvlihagdfT~~g~-~~ev~~fn~~~-gslph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 60 GYARFVCISDTHELTFD-------INDIPD-GDVLIHAGDFTNLGL-PEEVIKFNEWL-GSLPHEYKIVIAGNHELTF 127 (305)
T ss_pred CceEEEEecCcccccCc-------cccCCC-CceEEeccCCccccC-HHHHHhhhHHh-ccCcceeeEEEeeccceee
Confidence 55789999999986544 332343 454899999987665 33544432211 1223 24467999999855
No 127
>TIGR01774 PFL2-3 pyruvate formate-lyase. This model represents isoforms of the pyruvate-formate lyases found in a limited number of species including E. coli. This enzyme catalyzes the reaction pyruvate + CoA - acetyl-CoA + formate, which is a step in the fermentation of glucose.
Probab=48.43 E-value=26 Score=41.15 Aligned_cols=115 Identities=13% Similarity=0.127 Sum_probs=67.2
Q ss_pred hhHHHHHHHhhhhhhhhhhhHHHHHhhhhccCCCchhHHHHHHHHHHHhhhhhhh--hhhhHHhhhhhhhhhhhccchhh
Q 010977 58 ADAEQLWCSSVDGVVAVAKQVIDYACEMNFQDLDGPLKQAVVEILRSACNIVSKQ--RVFDSSLQGLLEELQVEVGSTMR 135 (496)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~i~~~--~~fe~ai~~~~~~~~~~~~~~~~ 135 (496)
.+.-++..-+++.|..-+.+--+++..+.=+.-|..+|++|++|- ..|++|+.+ +-|.+|+|..-=-+-.-.-++..
T Consensus 195 ~~fy~a~~i~~~a~~~~a~R~a~lA~~~a~~e~d~~Rk~EL~~iA-~~c~~vp~~pa~tf~EAlQ~~wf~~l~~~~E~ng 273 (786)
T TIGR01774 195 YSFYQAAKIVLEAVINHILRYAKLAEEMAASETGESRREELLKIA-EICRKVAAEKPQTFWQAVQLVWLVQSILQQESNE 273 (786)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH-HHhccCcccCCCCHHHHHHHHHHHHHHHHHhccc
Confidence 344455555667777777777777777766777777777777764 589999765 56999999421100000001111
Q ss_pred hhccCCCccCcccCCCCCCCCCCCCCCCCHHHHHHHHHHhh
Q 010977 136 ERLVGGKLENLTKEQDTLPLSWPRNGRISLEWIQLLISTFK 176 (496)
Q Consensus 136 ~~~~g~~~e~~~~~~~~~~l~~P~~~~~t~~~i~~l~~~~~ 176 (496)
..+.-|.++..=.|.=-.-+ ++|.+|.+..++|++.|.
T Consensus 274 ~~~s~GR~Dq~L~Pyy~~Dl---~~G~it~e~A~ELl~~~~ 311 (786)
T TIGR01774 274 QSISMGRIDQYLYPFYKKDI---GEGRIDRELAFEILASLW 311 (786)
T ss_pred cccCCCchHHHHHHHHHhHH---hcCCCCHHHHHHHHHHHH
Confidence 22222333332221100112 578899999999999774
No 128
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=48.42 E-value=30 Score=36.72 Aligned_cols=45 Identities=18% Similarity=0.126 Sum_probs=27.8
Q ss_pred ceEEEecCcccCCCCc---HHHHHHHHHhhhhCCCceEEeccCCccccc
Q 010977 251 RYFVFNGNYVDKGSWG---LEVLLVLLAWKVLMPHRVYLLRGNHETKNC 296 (496)
Q Consensus 251 ~~~VFLGDyVDRG~~S---lEvL~lL~~LK~~~P~~V~lLRGNHE~~~l 296 (496)
+-+||+||.|+. ... ..+++-.++-.+.+.=-...+.||||....
T Consensus 102 DlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes~ 149 (379)
T KOG1432|consen 102 DLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDESD 149 (379)
T ss_pred CEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEecccccccc
Confidence 459999999985 332 233333333333333346788999998653
No 129
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=44.95 E-value=32 Score=38.39 Aligned_cols=67 Identities=13% Similarity=0.082 Sum_probs=35.1
Q ss_pred ceEEEccCcCcHHH----------HHHHHHHhcC----CCCCCceEEEecCcccCCCCc-----HHHHHHHHHhhhhCCC
Q 010977 222 EVIVVGDILGQFHD----------LVALFEENAG----FPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPH 282 (496)
Q Consensus 222 ~i~VVGDIHG~~~d----------L~~il~~~~g----~p~~~~~~VFLGDyVDRG~~S-----lEvL~lL~~LK~~~P~ 282 (496)
.++-+.|+||++.. +..+++ ... ....+.-++..||++...+.+ .-++.++-.+..
T Consensus 36 til~tnD~Hg~~~~~~~~~~G~a~~a~~i~-~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~---- 110 (551)
T PRK09558 36 TILHTNDHHGHFWRNEYGEYGLAAQKTLVD-QIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGY---- 110 (551)
T ss_pred EEEEecccCCCccccccCCccHHHHHHHHH-HHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCC----
Confidence 47788999998742 233343 211 112234477799998643322 112333333321
Q ss_pred ceEEeccCCccc
Q 010977 283 RVYLLRGNHETK 294 (496)
Q Consensus 283 ~V~lLRGNHE~~ 294 (496)
.+.. .||||.-
T Consensus 111 Da~t-lGNHEFD 121 (551)
T PRK09558 111 DAMA-VGNHEFD 121 (551)
T ss_pred CEEc-ccccccC
Confidence 3443 4999954
No 130
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=43.44 E-value=32 Score=37.64 Aligned_cols=19 Identities=11% Similarity=0.240 Sum_probs=18.1
Q ss_pred HHHHHHHhcCceEEEeecC
Q 010977 422 CTEEFLKENHLKLIIRSHE 440 (496)
Q Consensus 422 ~~~~FL~~n~l~~IIRgHe 440 (496)
.++..+-++++++++=||.
T Consensus 323 ~LE~l~~~~~VDvvf~GHv 341 (452)
T KOG1378|consen 323 GLEPLFVKYKVDVVFWGHV 341 (452)
T ss_pred HHHHHHHHhceeEEEeccc
Confidence 6899999999999999998
No 131
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=39.76 E-value=1.2e+02 Score=30.88 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=40.1
Q ss_pred eEEEccCc-CcH----HHHHHHHHHhcCCCC---------CCceEEEecCcccCCCC------------------cHHHH
Q 010977 223 VIVVGDIL-GQF----HDLVALFEENAGFPS---------DHRYFVFNGNYVDKGSW------------------GLEVL 270 (496)
Q Consensus 223 i~VVGDIH-G~~----~dL~~il~~~~g~p~---------~~~~~VFLGDyVDRG~~------------------SlEvL 270 (496)
+.+|+||| |.- ..|..+.+.+.|... .-.++|..||.|+.-.. ..+.+
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 56778887 322 233333332334321 11369999999985432 22223
Q ss_pred HHHHHhhhhCC--CceEEeccCCcccccc
Q 010977 271 LVLLAWKVLMP--HRVYLLRGNHETKNCT 297 (496)
Q Consensus 271 ~lL~~LK~~~P--~~V~lLRGNHE~~~ln 297 (496)
..+-.+-..-| -.|.+.+||||-....
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~~ 110 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANHS 110 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCccccc
Confidence 32222211222 2588999999987654
No 132
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=37.40 E-value=94 Score=30.45 Aligned_cols=87 Identities=22% Similarity=0.246 Sum_probs=62.6
Q ss_pred ceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCCcccccccccCchH----------------HHHHHhCcch
Q 010977 251 RYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWA----------------ELCTKFGKKD 314 (496)
Q Consensus 251 ~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNHE~~~ln~~ygF~~----------------e~~~ky~~~~ 314 (496)
..+||+| -|-+.-|.+.+|-+++.+|-.+.++ .|+-|.+..++...|.. |+...|-.
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~lt-- 112 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLT-- 112 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhh--
Confidence 4589997 5889999999999999998877666 89999887665444432 23333332
Q ss_pred hhHHHHhhhhhhcCCcceeEeeceEEEEec-CC
Q 010977 315 CKLVFDKCLECFRTLPLATIIAQGVYTTHG-GL 346 (496)
Q Consensus 315 ~~~l~~~~~~~f~~LPlaaii~~~il~vHG-GI 346 (496)
.+|..+.....++++...+-..++.+-| |-
T Consensus 113 --Sv~Tti~all~s~~lv~RirPdlil~NGPGT 143 (211)
T KOG3339|consen 113 --SVFTTIWALLQSFVLVWRIRPDLILCNGPGT 143 (211)
T ss_pred --hHHHHHHHHHHHheEEEecCCCEEEECCCCc
Confidence 3677777777778887777777777777 53
No 133
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=34.59 E-value=52 Score=38.61 Aligned_cols=41 Identities=12% Similarity=0.185 Sum_probs=24.9
Q ss_pred ceEEEccCcCcHHH----------------HHHHHHHhcCCCCCCceEEEecCcccCC
Q 010977 222 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKG 263 (496)
Q Consensus 222 ~i~VVGDIHG~~~d----------------L~~il~~~~g~p~~~~~~VFLGDyVDRG 263 (496)
+|+-..|+||++.. +..+++ .......+..+|..||++---
T Consensus 41 ~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~-~~R~e~~ntlllD~GD~iqGs 97 (780)
T PRK09418 41 RILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVN-KAREEAKNSVLFDDGDALQGT 97 (780)
T ss_pred EEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHH-HHHHhCCCeEEEECCCCCCCc
Confidence 58889999999632 333444 222222334577799988543
No 134
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=33.50 E-value=54 Score=33.96 Aligned_cols=72 Identities=22% Similarity=0.345 Sum_probs=44.7
Q ss_pred CCceEEEccC--cCcHHHHHHHHHH-hcCCCCCCceEEEecCcc-cCCCCc---------HHHHHHHHHhhhhCCCceEE
Q 010977 220 DSEVIVVGDI--LGQFHDLVALFEE-NAGFPSDHRYFVFNGNYV-DKGSWG---------LEVLLVLLAWKVLMPHRVYL 286 (496)
Q Consensus 220 ~~~i~VVGDI--HG~~~dL~~il~~-~~g~p~~~~~~VFLGDyV-DRG~~S---------lEvL~lL~~LK~~~P~~V~l 286 (496)
+-++.||||- +|.|..-.-.++. .+|..-.-+-+|-+||-+ |-|..+ -|-+..--+|+. -.+.
T Consensus 43 slsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQk----pWy~ 118 (336)
T KOG2679|consen 43 SLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQK----PWYS 118 (336)
T ss_pred ceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccccc----chhh
Confidence 3589999995 8888775555440 233222334488899955 667654 333333334432 4788
Q ss_pred eccCCcccc
Q 010977 287 LRGNHETKN 295 (496)
Q Consensus 287 LRGNHE~~~ 295 (496)
+.||||.+-
T Consensus 119 vlGNHDyrG 127 (336)
T KOG2679|consen 119 VLGNHDYRG 127 (336)
T ss_pred hccCccccC
Confidence 999999764
No 135
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=28.17 E-value=1.4e+02 Score=24.56 Aligned_cols=70 Identities=19% Similarity=0.103 Sum_probs=46.5
Q ss_pred ceEEEccCcCcHHHHHHHHHHhcCCCCCCceEEEecCcccCCCCcHHHHHHHHHhhhhCCCceEEeccCC
Q 010977 222 EVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 291 (496)
Q Consensus 222 ~i~VVGDIHG~~~dL~~il~~~~g~p~~~~~~VFLGDyVDRG~~SlEvL~lL~~LK~~~P~~V~lLRGNH 291 (496)
.+.|+=|---|...+..+++..-...+..+.++.+|+.-|+|..+.+....+-.+...+...+++...|+
T Consensus 13 ~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 13 GPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 5778888777888888888732223335666899999999888888766666666555666666655554
No 136
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=20.05 E-value=89 Score=35.70 Aligned_cols=58 Identities=24% Similarity=0.377 Sum_probs=39.0
Q ss_pred ChhHHHHHHHhcCce----EEEeecCCCCCCCCCCccccccCCccccccCCCCeEEEE---ecCCCCccccCcceeEE
Q 010977 419 GPDCTEEFLKENHLK----LIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTL---FTAPNYPQVQILLGCTM 489 (496)
Q Consensus 419 G~d~~~~FL~~n~l~----~IIRgHe~~d~~~~r~~~~~v~~Gy~~~h~~~~gkviTV---FSApnY~~~~~n~g~~l 489 (496)
.++..++.|+..|++ .||-||+++. +.+|=+.- .++||++.| ||.. |...+.-+|-+|
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk----------~k~GEsPI--Ka~Gkl~VIDGGfskA-Yqk~TGIAGYTL 571 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVK----------VKKGESPI--KANGKLIVIDGGFSKA-YQKTTGIAGYTL 571 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccc----------cCCCCCCc--cCCCEEEEEcChhhhh-hccccCccceEE
Confidence 466788899999997 9999999863 34555442 357888877 5554 444444444443
Done!