Query 010980
Match_columns 496
No_of_seqs 258 out of 1674
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 06:44:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010980.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010980hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1092 Ypt/Rab-specific GTPas 100.0 2.5E-47 5.4E-52 380.7 17.8 275 181-466 174-478 (484)
2 KOG4567 GTPase-activating prot 100.0 8.1E-45 1.8E-49 350.8 21.9 287 171-463 11-362 (370)
3 KOG2058 Ypt/Rab GTPase activat 100.0 8.2E-44 1.8E-48 366.5 22.4 252 170-446 124-384 (436)
4 KOG2223 Uncharacterized conser 100.0 1.7E-41 3.6E-46 338.7 16.3 278 170-462 275-556 (586)
5 KOG2224 Uncharacterized conser 100.0 3.5E-40 7.7E-45 328.5 19.9 300 164-465 402-733 (781)
6 smart00164 TBC Domain in Tre-2 100.0 1.6E-39 3.5E-44 308.9 18.5 196 193-407 1-198 (199)
7 COG5210 GTPase-activating prot 100.0 1.6E-36 3.5E-41 326.3 21.0 244 168-431 182-430 (496)
8 KOG2197 Ypt/Rab-specific GTPas 100.0 1.8E-36 4E-41 321.0 12.0 304 159-463 140-443 (488)
9 PF00566 RabGAP-TBC: Rab-GTPas 100.0 6.9E-35 1.5E-39 279.0 17.8 212 199-428 1-214 (214)
10 KOG2222 Uncharacterized conser 100.0 2.4E-33 5.1E-38 282.6 17.2 258 180-460 154-417 (848)
11 KOG4347 GTPase-activating prot 100.0 2.4E-30 5.1E-35 271.3 16.1 248 170-445 174-425 (671)
12 KOG1093 Predicted protein kina 100.0 6E-30 1.3E-34 263.9 16.9 243 193-468 352-597 (725)
13 KOG4436 Predicted GTPase activ 100.0 7E-30 1.5E-34 271.3 16.0 257 170-448 550-810 (948)
14 KOG1091 Ypt/Rab-specific GTPas 100.0 1.4E-27 3.1E-32 246.5 19.6 264 200-469 28-370 (625)
15 KOG1102 Rab6 GTPase activator 99.9 5.8E-26 1.3E-30 236.7 14.7 241 183-451 133-375 (397)
16 KOG2595 Predicted GTPase activ 99.9 1.3E-25 2.8E-30 220.0 15.0 258 182-469 45-308 (395)
17 KOG2221 PDZ-domain interacting 99.9 9.2E-24 2E-28 195.6 4.1 190 169-382 75-267 (267)
18 KOG4436 Predicted GTPase activ 99.6 1.5E-15 3.2E-20 162.9 12.8 252 183-458 172-437 (948)
19 KOG3636 Uncharacterized conser 99.6 2.2E-14 4.7E-19 145.3 15.4 203 260-468 69-278 (669)
20 KOG2801 Probable Rab-GAPs [Int 99.2 4.6E-10 1E-14 109.1 16.8 249 183-463 30-295 (559)
21 KOG1648 Uncharacterized conser 99.1 3.5E-12 7.6E-17 130.7 -2.0 268 165-459 529-800 (813)
22 PF14961 BROMI: Broad-minded p 97.1 0.0078 1.7E-07 69.4 14.6 171 284-458 1084-1274(1296)
23 KOG2197 Ypt/Rab-specific GTPas 96.8 0.0011 2.3E-08 71.5 4.3 82 163-244 44-125 (488)
24 KOG2224 Uncharacterized conser 88.4 0.16 3.5E-06 52.7 0.4 34 300-333 566-599 (781)
25 KOG1102 Rab6 GTPase activator 63.1 1.9 4.1E-05 45.6 -0.8 115 260-406 2-116 (397)
26 PF08109 Antimicrobial14: Lact 30.8 34 0.00074 21.6 1.4 16 300-315 3-18 (31)
27 PF09597 IGR: IGR protein moti 27.8 88 0.0019 23.7 3.4 28 170-206 21-48 (57)
28 PF07644 PGAMP: Planctomycete 20.1 34 0.00073 22.9 -0.1 12 22-33 1-12 (35)
No 1
>KOG1092 consensus Ypt/Rab-specific GTPase-activating protein GYP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.5e-47 Score=380.75 Aligned_cols=275 Identities=27% Similarity=0.521 Sum_probs=243.5
Q ss_pred CCCCHHHHHHHHHhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCChHHHhhhhhhhhhccc
Q 010980 181 RVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGL 260 (496)
Q Consensus 181 ~~~~~~~Lr~~l~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~~~~~~~~~~~~e~~~q 260 (496)
..++.++||+ ++|.|||...|+.+|++|+|+.|.++ +.|+...+.++.+|.+++.++........... +..+|
T Consensus 174 ~~id~~~Lr~-l~w~Gvp~~~Rp~~Wkll~gylp~n~--~rr~~~l~~Kr~eY~~~v~~~~~~~~~~~~~~----d~~rQ 246 (484)
T KOG1092|consen 174 PIIDLEKLRK-LCWNGVPSKMRPIVWKLLSGYLPPNS--DRREGTLQRKRKEYVDSVVQYFDSLTNGDEDQ----DTWRQ 246 (484)
T ss_pred ccccHHHHHH-HccCCCCccccCccceeeecccCcch--hhhhhhHHHHHHHHHHHHHHHhccCCCccccC----ccccc
Confidence 3478899999 78999999999999999999999874 56788999999999999998865543212222 44569
Q ss_pred ccccccccCCCccccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcC----------------------
Q 010980 261 IDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVME---------------------- 318 (496)
Q Consensus 261 I~kDV~RT~~~~~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~---------------------- 318 (496)
|..|++||.|..++|+.+. .++.+.|||+.|+.++|..||+||+++++.|++.++.
T Consensus 247 I~id~prm~p~~~l~q~~~--vq~~lerIl~iwairhpAsGyvqgindlvtpf~vvfl~e~l~~~~~~~~~d~~~l~~E~ 324 (484)
T KOG1092|consen 247 IPIDIPRMNPHIPLFQQKI--VQEMLERILYIWAIRHPASGYVQGINDLVTPFFVVFLSEYLGPIMDVESIDMSLLPAEN 324 (484)
T ss_pred cccCCCCCCccccchhhHH--HHHHHHHHHHHHHHhcccccccccceeeechhhhhhhHhhcCccccccccchhhccHHH
Confidence 9999999999999998643 5699999999999999999999999999999998862
Q ss_pred ---ChHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHH
Q 010980 319 ---DESQSFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKT 395 (496)
Q Consensus 319 ---dE~~aFw~f~~Lm~~~~~~f~~~~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~v 395 (496)
-|++||||+.+|++.+.+||...++|++..+..|+.|++.+|++||+||+++|++..+|+||||.+||.|+||+.++
T Consensus 325 ~~~iEADsyWClskLLD~IQDNYtfaQpGIq~kV~~L~eLv~RID~~~hkHlq~~gveylQFAFRWmNcLLmRE~pl~~~ 404 (484)
T KOG1092|consen 325 AEDIEADAYWCLSKLLDGIQDNYTFAQPGIQRKVKNLKELVQRIDEPLHKHLQEHGVEYLQFAFRWMNCLLMREFPLRCT 404 (484)
T ss_pred HhhhhhhHHHHHHHHHHHhhhhhhhcChhHHHHHHHHHHHHHHhcHHHHHHHHHhchHHHHHHHHHHHHHHHhhccchhH
Confidence 18999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccc-hhHHHHHHHHHHHHhHHHHhcCCCCHHHHHHHHHhCCCC----CCHHHHHHHHHHHHHHhcc
Q 010980 396 MRLWEVLWTHYLS-EHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINELSGR----IDLDAILRDAEALCICAGE 466 (496)
Q Consensus 396 lRLWD~~l~~g~~-~~fl~~valAiL~~~r~~IL~~~~d~~eil~~L~~lp~~----iD~d~ll~~A~~L~~~~~e 466 (496)
+||||.|++++.+ .+||+|||+|+|..++++|+ ++||.+++.|||++|.. -+++-||..|..+......
T Consensus 405 iRlWDTY~aE~dgf~~FhvYvcAAFL~kW~~eL~--e~DFQ~~ilfLQnlPT~~W~d~eIellLseA~~~k~~f~d 478 (484)
T KOG1092|consen 405 IRLWDTYLAEPDGFNEFHVYVCAAFLLKWSSELM--ENDFQELILFLQNLPTHNWSDREIELLLSEAFRLKSVFSD 478 (484)
T ss_pred HHHHHHhhcCccchHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHcc
Confidence 9999999998554 37999999999999999999 45999999999999954 2677888888877655443
No 2
>KOG4567 consensus GTPase-activating protein [General function prediction only]
Probab=100.00 E-value=8.1e-45 Score=350.81 Aligned_cols=287 Identities=28% Similarity=0.509 Sum_probs=245.3
Q ss_pred HHHhchhccCCCCCHHHHHHHHHhCCCC--hHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCC----
Q 010980 171 EWTTFLDNEGRVMDSNALRKRIFYGGVD--HKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSIS---- 244 (496)
Q Consensus 171 ~W~~~l~~~~~~~~~~~Lr~~l~~~GIP--~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~---- 244 (496)
..+..+......++.++||+ ++..|+| ..+|+.+|++|||+++.+.+.+ ...+++++..|..++++...-+
T Consensus 11 ~~edvl~~~~~~id~kelr~-~~~~g~p~~~~lR~~~WkllL~Yl~~er~~w--~s~La~~R~~Y~q~i~e~v~epg~~~ 87 (370)
T KOG4567|consen 11 SIEDVLNPADDTIDLKELRK-LCFYGVPDDASLRPLVWKLLLGYLPPERSKW--TSFLAKKRSLYKQFIEEIVDEPGKKD 87 (370)
T ss_pred hHHHhhccccchhhHHHHHH-HhhcCCCCccchhHhHHHHHHhhcChhhhhh--HHHHHHHHHHHHHHHHHhccCccccc
Confidence 44445544445588999999 7799999 5899999999999999876554 7888899999998877542210
Q ss_pred --------------------hHHHhhhhhhhhhcccccccccccCCCccccCCCCC-h----------------------
Q 010980 245 --------------------PEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDN-P---------------------- 281 (496)
Q Consensus 245 --------------------~~~~~~~~~~~e~~~qI~kDV~RT~~~~~~F~~~~~-~---------------------- 281 (496)
....+.+.+..|...||++||.||.|...+|+.... +
T Consensus 88 ~~~~v~~~D~~~dhPls~~~~sdwn~ff~d~e~l~QIdrDvrr~~pdi~ff~~~~~~p~~~~~~~~~~i~~~q~~~~n~~ 167 (370)
T KOG4567|consen 88 NSKKVDSNDTDEDHPLSLGPTSDWNTFFKDCEVLLQIDRDVRRTHPDISFFQLASSYPCRQGMDSRRRINASQEAGRNRL 167 (370)
T ss_pred cccccccCcccccCCCCCCchhhHHHHhhhhHHHHHHHHHHHHhCcchHhhhhccccccccchhhHhhhhhhhHhhhccc
Confidence 012234445568889999999999999999876421 1
Q ss_pred --hHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcC----------ChHHHHHHHHHHHHhcCCCCCC----Ccchh
Q 010980 282 --NVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVME----------DESQSFWCFVALMERLGPNFNR----DQNGM 345 (496)
Q Consensus 282 --~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~----------dE~~aFw~f~~Lm~~~~~~f~~----~~~gl 345 (496)
......|||.+||..||.+|||||||.|+||+++|+. .|++||+||+.||..++++|.. ..-|+
T Consensus 168 gl~~~~~erilfiyAKLNpGi~YVQGMNEIlaPiYYVfa~Dpd~e~~~~aEaDaFFCF~~LMseirDnf~k~LDdS~~GI 247 (370)
T KOG4567|consen 168 GLTRFAAERILFIYAKLNPGIGYVQGMNEILAPIYYVFANDPDEENRAYAEADAFFCFTQLMSEIRDNFIKTLDDSVGGI 247 (370)
T ss_pred chhhhHHHHHHHHHhhcCCcchHHhhhHHHhhhhheeeccCCchhhHHhhhhhHHHHHHHHHHHHHHHHHHhccccccch
Confidence 1234589999999999999999999999999999984 3899999999999999888743 34588
Q ss_pred hhHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHHHHHhhccchhHHHHHHHHHHHHhHH
Q 010980 346 HSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRN 425 (496)
Q Consensus 346 ~~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD~~l~~g~~~~fl~~valAiL~~~r~ 425 (496)
+..+..+..+|+.+|-+||+||+..++.|.+|+|||+.++++.+||+++++||||.++++....+|++++|.|||...|+
T Consensus 248 ~~~Msr~~~~lk~~D~EL~~~L~~~~i~PqfyaFRWitLLLsQEF~lpDvi~lWDsl~sD~~rfd~Ll~iCcsmlil~Re 327 (370)
T KOG4567|consen 248 HFLMSRLSELLKKHDEELWRHLEEKEIHPQFYAFRWITLLLSQEFPLPDVIRLWDSLLSDPQRFDFLLYICCSMLILVRE 327 (370)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCccchhHHHHHHHHhccCCchhHHHHHHHHhcChhhhHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Q 010980 426 KIMGEQMDFDTLLKFINELSGRIDLDAILRDAEALCIC 463 (496)
Q Consensus 426 ~IL~~~~d~~eil~~L~~lp~~iD~d~ll~~A~~L~~~ 463 (496)
.|++. ||..-|++||+.| ..|+..++..|..|...
T Consensus 328 ~il~~--DF~~nmkLLQ~yp-~tdi~~~l~~A~~Lr~~ 362 (370)
T KOG4567|consen 328 RILEG--DFTVNMKLLQNYP-TTDISKMLAVADSLRDK 362 (370)
T ss_pred HHHhc--chHHHHHHHhcCC-CCCHHHHHHHHHHHHhc
Confidence 99965 9999999999999 89999999999999754
No 3
>KOG2058 consensus Ypt/Rab GTPase activating protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.2e-44 Score=366.55 Aligned_cols=252 Identities=26% Similarity=0.402 Sum_probs=218.6
Q ss_pred HHHHhchhcc-------CCCCCHHHHHHHHHhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhc
Q 010980 170 EEWTTFLDNE-------GRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQS 242 (496)
Q Consensus 170 ~~W~~~l~~~-------~~~~~~~~Lr~~l~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~ 242 (496)
.+|...+... .-..-.++|++ ++++|||+.+|+.||..+.|.... ...+..|+.++..-..
T Consensus 124 ~~~~l~~~~~~~~~~~~~~~~~s~elk~-liRkGiP~~~R~~VW~~~~g~~~~-----------~~~~~~yq~ll~~~~~ 191 (436)
T KOG2058|consen 124 LRWELELQSNIKLHSPNDFPPRSDELKR-LIRKGIPPELRGEVWWVLSGARRQ-----------LNYPGYYQELLRKGDE 191 (436)
T ss_pred HHHHHHhhhhhcccccccccCCcHHHHH-HHHcCCChhhhhHHHHHHhcchhh-----------ccCchhHHHHHhcCCC
Confidence 5676655542 11244678888 679999999999999999994211 1116788888765322
Q ss_pred CChHHHhhhhhhhhhcccccccccccCCCc-cccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChH
Q 010980 243 ISPEQARRFTKFRERKGLIDKDVVRTDRSV-TFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDES 321 (496)
Q Consensus 243 ~~~~~~~~~~~~~e~~~qI~kDV~RT~~~~-~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~ 321 (496)
... ...+||+.|+.||||++ +.|...+..+...|+|||.||+.+||.+|||||||+|||++|++|++|+
T Consensus 192 ~~~----------~~~~qI~~DL~RTfP~n~~~~~~~~~~~~~~LrRvL~Aya~hNp~vGYCQGmNflAallLL~~~~EE 261 (436)
T KOG2058|consen 192 KKS----------PVVKQIKLDLPRTFPDNFKGFDSEDSDGRQTLRRVLLAYARHNPSVGYCQGMNFLAALLLLLMPSEE 261 (436)
T ss_pred ccc----------hHHHHHHhccccccCCCcccCCCCCchHHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHhcCChH
Confidence 110 23469999999999999 8999988888899999999999999999999999999999999998899
Q ss_pred HHHHHHHHHHHhcCCC-CCCCcchhhhHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHH
Q 010980 322 QSFWCFVALMERLGPN-FNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWE 400 (496)
Q Consensus 322 ~aFw~f~~Lm~~~~~~-f~~~~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD 400 (496)
+|||||+.+++++.+. |..++.|.+....+|+.+|+..+|+|+.||..++++..++++.||+++|+..+|.++++||||
T Consensus 262 ~AFW~Lv~iie~~lp~Yyt~nL~g~qvDQ~VL~~llre~lPkl~~~l~~~~~~~~l~t~~wfLt~f~d~lP~~t~LrIwD 341 (436)
T KOG2058|consen 262 DAFWMLVALIENYLPRYYTPNLIGSQVDQKVLRELLREKLPKLSLHLEGNGVDASLETLPWFLTLFVDILPSETVLRIWD 341 (436)
T ss_pred HHHHHHHHHHHHhchhhcCchhhhhhccHHHHHHHHHHHCHHHHHhhhhcCCCeeeeehhhhHHHhcccccHHHHHHHHH
Confidence 9999999999999884 668899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccchhHHHHHHHHHHHHhHHHHhcCCCCHHHHHHHHHhCCC
Q 010980 401 VLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINELSG 446 (496)
Q Consensus 401 ~~l~~g~~~~fl~~valAiL~~~r~~IL~~~~d~~eil~~L~~lp~ 446 (496)
++|.+| .+++|.+|+|+++.++++|+++. +..++++++..+..
T Consensus 342 ~~f~eG--skvlfr~Alai~k~~ee~il~~~-~~~~i~~~~~~~~~ 384 (436)
T KOG2058|consen 342 CLFYEG--SKVLFRVALAILKKHEEEILKED-SSKEILRVLPDLTK 384 (436)
T ss_pred HHHhcc--cHHHHHHHHHHHHHhHHHHhcCC-CHHHHHHHHHHHHH
Confidence 999888 79999999999999999999986 89999999988763
No 4
>KOG2223 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.7e-41 Score=338.73 Aligned_cols=278 Identities=22% Similarity=0.410 Sum_probs=233.6
Q ss_pred HHHHh-chhccCCCCCHHHHHHHHHhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHH-HHHHHHHHhhcCChHH
Q 010980 170 EEWTT-FLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKS-EYENIKRQWQSISPEQ 247 (496)
Q Consensus 170 ~~W~~-~l~~~~~~~~~~~Lr~~l~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~-~Y~~L~~~~~~~~~~~ 247 (496)
..|.. ++.+|....+...+|+ ++|.|||+.+|++||.+..|. ..+-|.+-++.......+ +...+-++...
T Consensus 275 ~vW~~eILpnWe~m~~SrR~re-lWwQGiP~~VRGkvW~laIGN-el~it~elfd~~la~Aker~ak~~aeq~~~----- 347 (586)
T KOG2223|consen 275 NVWENEILPNWEDMLKSRRVRE-LWWQGIPPSVRGKVWSLAIGN-ELNITYELFDIALARAKEREAKSLAEQMSN----- 347 (586)
T ss_pred HHHHHHhccchHHHHhhHHHHH-HHHccCChhhcchhhHhhhCc-ccccCHHHHHHHHHHHHHHHHHHHHhhccc-----
Confidence 45663 6777776678889999 899999999999999999998 345555444333322222 23333333210
Q ss_pred HhhhhhhhhhcccccccccccCCCccccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChHHHHHHH
Q 010980 248 ARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCF 327 (496)
Q Consensus 248 ~~~~~~~~e~~~qI~kDV~RT~~~~~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~~aFw~f 327 (496)
.-....+...+|+.|+.||||+..+|+.+ +|....|..||.||++|.||+||||||++|+|+|++.| |+++||-||
T Consensus 348 --sa~~re~sv~~i~LDisrTfpsl~iFqk~-GPy~d~L~~lL~AYt~yRpDvgYVqgmSFIaAvLllnm-d~~~AFiaf 423 (586)
T KOG2223|consen 348 --SAADREASVELIKLDISRTFPSLSIFQKG-GPYHDDLHSLLGAYTCYRPDVGYVQGMSFIAAVLLLNM-DLADAFIAF 423 (586)
T ss_pred --chhhhhcchhheeechhccCcceeeeccC-CchHHHHHHHhhhheeecCccccccchHHHHHHHHHcC-CcHHHHHHH
Confidence 11223455679999999999999999876 67889999999999999999999999999999999999 799999999
Q ss_pred HHHHHhcCC--CCCCCcchhhhHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHHHHHhh
Q 010980 328 VALMERLGP--NFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTH 405 (496)
Q Consensus 328 ~~Lm~~~~~--~f~~~~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD~~l~~ 405 (496)
.+|+++-.. .|..+.+.|...+.+|+..++...|+|+.||.++++.|.+|++.|+.++|+..+|++.++||||+|+-+
T Consensus 424 ANLLdkp~q~Aff~~d~s~m~~yf~tfe~~leenlp~L~~Hl~kl~l~PDiylidwiftlyskslpldlacRIwDvy~rd 503 (586)
T KOG2223|consen 424 ANLLDKPCQQAFFRVDHSSMLSYFATFEVFLEENLPKLFTHLKKLELTPDIYLIDWIFTLYSKSLPLDLACRIWDVYCRD 503 (586)
T ss_pred HHHhccHHHHHHHhcCcHHHHHHHHHHHHHHHhccHHHHHHHHhccCCCchhhHHHHHHHHhccCChHHhhhhhheeeec
Confidence 999997433 688889999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccchhHHHHHHHHHHHHhHHHHhcCCCCHHHHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 010980 406 YLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINELSGRIDLDAILRDAEALCI 462 (496)
Q Consensus 406 g~~~~fl~~valAiL~~~r~~IL~~~~d~~eil~~L~~lp~~iD~d~ll~~A~~L~~ 462 (496)
| +.|++..+++||+.+++.|+ .|||..+.+||..+|.++..+++......+..
T Consensus 504 g--eeFlfr~~lgIlklyepkLl--~mDf~~~~qfLtklp~dL~~eelF~~i~~~~~ 556 (586)
T KOG2223|consen 504 G--EEFLFRTALGILKLYEPKLL--VMDFIHVAQFLTKLPEDLTPEELFMHIAYIQM 556 (586)
T ss_pred c--hHHHHHHHHHHHHHccchHh--hhhHHHHHHHHHhCcccCCHHHHHHHHHHHhh
Confidence 7 78999999999999999999 77999999999999999988887765555543
No 5
>KOG2224 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=3.5e-40 Score=328.54 Aligned_cols=300 Identities=38% Similarity=0.765 Sum_probs=262.2
Q ss_pred CCCCCHHHHHh-chhccCCCCCHHHHHHHHHhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHh-h
Q 010980 164 QPPLGSEEWTT-FLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQW-Q 241 (496)
Q Consensus 164 ~~~l~~~~W~~-~l~~~~~~~~~~~Lr~~l~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~-~ 241 (496)
.+.++..-|.. .+++.|++-+--+||+.++.+||...+|+.||++||.+|...+|.++|+.+...++++|+.+.++- .
T Consensus 402 ~kki~~n~~~~t~lne~gqiedd~~lrk~iffggid~sir~evwpfllk~ys~est~edr~al~~~krkey~eiqqkrly 481 (781)
T KOG2224|consen 402 VKKIGTNAFLGTHLNEKGQIEDDLKLRKAIFFGGIDKSIRGEVWPFLLKCYSFESTFEDRAALMDIKRKEYEEIQQKRLY 481 (781)
T ss_pred hhhhhHHHHHHhhhhhcccchhHHHhhhhheeccchhhhhcchhHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHhh
Confidence 34455667775 667778887777999999999999999999999999999999999999999999999999987654 5
Q ss_pred cCChHHHhhhhhhhhhcccccccccccCCCccccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChH
Q 010980 242 SISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDES 321 (496)
Q Consensus 242 ~~~~~~~~~~~~~~e~~~qI~kDV~RT~~~~~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~ 321 (496)
++++++ +..-|+...-.++|||.||+++++||.++++++.+.|++||..|+.|||.+||.|||++++||.|.-.++|.
T Consensus 482 smspee--h~~fwknvq~tvdkdvvrtdrnn~ff~gddnpn~e~mk~illn~avyn~~m~ysqgmsdllapvlcevqnes 559 (781)
T KOG2224|consen 482 SMSPEE--HIAFWKNVQFTVDKDVVRTDRNNPFFCGDDNPNTESMKNILLNFAVYNPAMGYSQGMSDLLAPVLCEVQNES 559 (781)
T ss_pred cCCHHH--HHHHHhheEEEEecceeeccCCCCcccCCCCCcHHHHHHHHHhheeecccccccccchhhcchhhhhhcccc
Confidence 777765 344566777789999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHhcCC--------------------------CC--CCCcchhhhHHHHHHHHHHHhChhhhhHHhhcCCC
Q 010980 322 QSFWCFVALMERLGP--------------------------NF--NRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCL 373 (496)
Q Consensus 322 ~aFw~f~~Lm~~~~~--------------------------~f--~~~~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~ 373 (496)
++||||+.||+.+.+ .| .+....+...+..+.+|++...|..|+||.++|-+
T Consensus 560 etfwcfvglmqgmsdlvapilaevldesdtfwcfvglmqna~fv~sp~d~dmd~~l~ylreliri~~~~fykhl~q~~ed 639 (781)
T KOG2224|consen 560 ETFWCFVGLMQGMSDLVAPILAEVLDESDTFWCFVGLMQNAFFVCSPRDEDMDHNLLYLRELIRIMHPHFYKHLEQHGED 639 (781)
T ss_pred chhhhhhhhhccchhhhhhHHHhhhccccchhhhhhhhcceEEEeCCcchhhhHhHHHHHHHHHHhhHHHHHHHHHhCcc
Confidence 888888888885421 11 12234677788889999999999999999999755
Q ss_pred c--chhHHHHHHHhccccCchHHHHHHHHHHHhhccchhHHHHHHHHHHHHhHHHHhcCCCCHHHHHHHHHhCCCCCCHH
Q 010980 374 N--YFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINELSGRIDLD 451 (496)
Q Consensus 374 ~--~~f~~~WfltlF~~~~p~~~vlRLWD~~l~~g~~~~fl~~valAiL~~~r~~IL~~~~d~~eil~~L~~lp~~iD~d 451 (496)
. .+||-||++.+|+|+||-..++|||++.|++|...-|++|+|+||+..+.+.+++.+...++++--+.++.-.||-+
T Consensus 640 ~lellfchrwlllcfkref~ea~airiweacwa~y~tdyfhlficlaiiaiy~ddvi~q~l~~demllhf~nlam~mdge 719 (781)
T KOG2224|consen 640 GLELLFCHRWLLLCFKREFPEAEAIRIWEACWAHYLTDYFHLFICLAIIAIYADDVIAQNLAPDEMLLHFGNLAMHMDGE 719 (781)
T ss_pred hhhHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhHHHHhhcCchhHHHhhhhhhhhcCch
Confidence 4 57999999999999999999999999999999888899999999999999999988889999999999999889999
Q ss_pred HHHHHHHHHHHHhc
Q 010980 452 AILRDAEALCICAG 465 (496)
Q Consensus 452 ~ll~~A~~L~~~~~ 465 (496)
-++++|+.|.....
T Consensus 720 lilrkar~ll~qfr 733 (781)
T KOG2224|consen 720 LILRKARGLLHQFR 733 (781)
T ss_pred hhHHHHHHHHHHHh
Confidence 99999999965543
No 6
>smart00164 TBC Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs. Widespread domain present in Gyp6 and Gyp7, thereby giving rise to the notion that it performs a GTP-activator activity on Rab-like GTPases.
Probab=100.00 E-value=1.6e-39 Score=308.88 Aligned_cols=196 Identities=35% Similarity=0.649 Sum_probs=173.9
Q ss_pred HhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCChHHHhhhhhhhhhcccccccccccCCCc
Q 010980 193 FYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSV 272 (496)
Q Consensus 193 ~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~~~~~~~~~~~~e~~~qI~kDV~RT~~~~ 272 (496)
+++|||+++|+.+|+.++|+.+...+ ..+..|.++++++..... +..++|++||.||+|++
T Consensus 1 ~~~Gip~~~R~~vW~~ll~~~~~~~~---------~~~~~Y~~l~~~~~~~~~----------~~~~~I~~Dv~Rt~~~~ 61 (199)
T smart00164 1 VRKGVPPSLRGVVWKLLLNAQPMDTS---------ADKDLYSRLLKETAPKDK----------SIVHQIEKDLRRTFPEH 61 (199)
T ss_pred CCCCCCHHHHHHHHHHHhCCchhhhc---------ccchHHHHHHHhhcCCCh----------hhHHHHhcccCCCCCCc
Confidence 37999999999999999999754321 136789998877544322 12359999999999999
Q ss_pred cccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChHHHHHHHHHHHHhcCCC-CCCCcchhhhHHHH
Q 010980 273 TFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPN-FNRDQNGMHSQLFA 351 (496)
Q Consensus 273 ~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~~aFw~f~~Lm~~~~~~-f~~~~~gl~~~l~~ 351 (496)
++|+....++++.|+|||.+|+.++|++||||||++||++|+.++.+|++|||||.++|+++... |..+.+++...+..
T Consensus 62 ~~f~~~~~~~~~~L~~IL~~~~~~~p~~gY~QGm~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 141 (199)
T smart00164 62 SFFQDKEGPGQESLRRVLKAYALYNPEVGYCQGMNFLAAPLLLVMPDEEDAFWCLVKLMERYGPNFYLPDMSGLQLDLLQ 141 (199)
T ss_pred hhhcCCCcccHHHHHHHHHHHHHHCCCCceeccHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCcccCCCChHHHHHHHHH
Confidence 99998777789999999999999999999999999999999999988999999999999988776 55666789999999
Q ss_pred HHHHHHHhChhhhhHHhh-cCCCcchhHHHHHHHhccccCchHHHHHHHHHHHhhcc
Q 010980 352 LSKLVELLDNPLHNYFKQ-NDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYL 407 (496)
Q Consensus 352 l~~LL~~~~P~L~~hL~~-~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD~~l~~g~ 407 (496)
++.+++..+|+||+||++ .++++.+|+++||+++|++++|++.++||||.++.+|.
T Consensus 142 ~~~ll~~~~p~l~~~l~~~~~i~~~~~~~~W~~~lF~~~~~~~~~~riwD~~l~eG~ 198 (199)
T smart00164 142 LDRLVKEYDPDLYKHLKDKLGIDPSLYALRWFLTLFARELPLEIVLRIWDVLFAEGS 198 (199)
T ss_pred HHHHHHHHCHHHHHHHHHhcCCCchhHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCC
Confidence 999999999999999996 99999999999999999999999999999999999873
No 7
>COG5210 GTPase-activating protein [General function prediction only]
Probab=100.00 E-value=1.6e-36 Score=326.31 Aligned_cols=244 Identities=32% Similarity=0.567 Sum_probs=207.3
Q ss_pred CHHHHHhchhccCCC---CCHHHHHHHHHhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCC
Q 010980 168 GSEEWTTFLDNEGRV---MDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSIS 244 (496)
Q Consensus 168 ~~~~W~~~l~~~~~~---~~~~~Lr~~l~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~ 244 (496)
....|...++..+.. ....++++ +.+.|||+.+|+.+|..++|+.+... .....|..+........
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~gip~~~r~~vw~~~~~~~~~~~----------~~~~~y~~~~~~~~~~~ 250 (496)
T COG5210 182 ADKLWISYLDPNPLSFLPVQLSKLRE-LIRKGIPNELRGDVWEFLLGIGFDLD----------KNPGLYERLLNLHREAK 250 (496)
T ss_pred HHHHHHHHHhcccchhhhhhHHHHHH-HHHhcCChHhhhhhHHHHhccchhhc----------cCchHHHHHHHHHHhcC
Confidence 346677777665552 56678888 45899999999999999999976542 34566666655332211
Q ss_pred hHHHhhhhhhhhhcccccccccccCCCccccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChHHHH
Q 010980 245 PEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSF 324 (496)
Q Consensus 245 ~~~~~~~~~~~e~~~qI~kDV~RT~~~~~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~~aF 324 (496)
.. ......+|++||.||+|.++.|+.+.+...+.|+|||.+|+.+||++||||||++|+|+||.+|..|+.||
T Consensus 251 ~~-------~~~~~~~i~~Dl~rt~~~~~~f~~~~s~~~~~L~rvL~ays~~~p~vgY~QgMn~l~a~ll~~~~~Ee~AF 323 (496)
T COG5210 251 IP-------TQEIISQIEKDLSRTFPDNSLFQTEISIRAENLRRVLKAYSLYNPEVGYVQGMNFLAAPLLLVLESEEQAF 323 (496)
T ss_pred CC-------cHHHHHHHHccccccccccccccCcccccHHHHHHHHHHHHhcCCCCceeccHHHHHHHHHHHhhhhHHHH
Confidence 10 00345699999999999999999887765567999999999999999999999999999999997799999
Q ss_pred HHHHHHHH-h-cCCCCCCCcchhhhHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHHHH
Q 010980 325 WCFVALME-R-LGPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVL 402 (496)
Q Consensus 325 w~f~~Lm~-~-~~~~f~~~~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD~~ 402 (496)
|||++||+ . +...|..++.|++..+.++..+++..+|+||.||...++...+|+++||+++|.++||++.++||||++
T Consensus 324 ~~l~~L~~~~~l~~~~~~~~~G~~~~~~~l~~~v~~~~p~l~~hl~~~~~~~~~~~~~w~l~lF~~~~p~e~~lriwD~l 403 (496)
T COG5210 324 WCLVKLLKNYGLPGYFLKNLSGLHRDLKVLDDLVEELDPELYEHLLREGVVLLMFAFRWFLTLFVREFPLEYALRIWDCL 403 (496)
T ss_pred HHHHHHHHhccchhhcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhhHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 99999999 3 445788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccchhHHHHHHHHHHHHhHHHHhcCC
Q 010980 403 WTHYLSEHLHLYVCVAILKRYRNKIMGEQ 431 (496)
Q Consensus 403 l~~g~~~~fl~~valAiL~~~r~~IL~~~ 431 (496)
|.+| ..+++.+++|++...+..++...
T Consensus 404 f~eg--~~~l~~~~~~~l~~~~~~l~~~~ 430 (496)
T COG5210 404 FLEG--SSMLFQLALAILKLLRDKLLKLD 430 (496)
T ss_pred HHhc--cHHHHHHHHHHHHhhhhhhhccC
Confidence 9988 57888999999999999999654
No 8
>KOG2197 consensus Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=321.01 Aligned_cols=304 Identities=50% Similarity=0.833 Sum_probs=277.7
Q ss_pred cCCCCCCCCCHHHHHhchhccCCCCCHHHHHHHHHhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHH
Q 010980 159 WGKPRQPPLGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKR 238 (496)
Q Consensus 159 ~~~~~~~~l~~~~W~~~l~~~~~~~~~~~Lr~~l~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~ 238 (496)
+...+++.++.++|......+++.......+.++++.|+-+.+|+.+|+.+.++++++.+..++...... ..+|...+.
T Consensus 140 ~~~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~k~ 218 (488)
T KOG2197|consen 140 VSDNRSPSLTLEEYNSNAMREGRLDESVHQRERIFSGGLSKSLRAEVWKFLLDYSPWDSTTRERVSLRKL-TDEYFRLKL 218 (488)
T ss_pred eecCCCCcchhhhhhhhhhhccccccchhhhheecccccccchhhhhhhhhhcccCcccccccccccccc-cccHhhhhh
Confidence 4556667789999999887788776555555568889987799999999999999999999888877777 899999999
Q ss_pred HhhcCChHHHhhhhhhhhhcccccccccccCCCccccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcC
Q 010980 239 QWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVME 318 (496)
Q Consensus 239 ~~~~~~~~~~~~~~~~~e~~~qI~kDV~RT~~~~~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~ 318 (496)
+|......+......+.+....|.+||.||++.+.++..+.+++...|.+||.+|+.+++++||||||+++++|++.+++
T Consensus 219 qW~~~~~~~~~~~~~~~~~~~~i~~dv~rtDr~~~~~~~~~n~~~~~l~~iL~ty~~~~~d~GY~QgmSDllspi~~v~~ 298 (488)
T KOG2197|consen 219 QWSSTSPEQSPESEGYLERKSRIEKDVGRTDRSLEFYEGEENPHLARLVDILLTYAVYDFDLGYCQGMSDLLSPILIVME 298 (488)
T ss_pred hheeccccccccccchhhhhhhhhhhccccchhhhhhhcccccCHHHHHHHHhhcccccCccccccCchhhcCcceeeec
Confidence 99887766655444466677899999999999999999877777899999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHH
Q 010980 319 DESQSFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRL 398 (496)
Q Consensus 319 dE~~aFw~f~~Lm~~~~~~f~~~~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRL 398 (496)
+|.+|||||+.+|++...+|..++.|++.++..+..+++..+|.||+||+..+....+|+++|++.+|.++|.++++++|
T Consensus 299 de~~aFwcFv~fm~~~~~nF~~d~~~~~~Ql~~~~~li~~~dp~l~~hLe~~d~~~~~f~fr~l~v~frrEf~~ed~l~L 378 (488)
T KOG2197|consen 299 DEVEAFWCFVGFMDRLRHNFRIDQSGMQTQLAQLSSLIQELDPRLYQHLEKLDAGDLFFCFRMLLVPFRREFEFEDSLRL 378 (488)
T ss_pred CchHHHHHHHHHHHHHhhcCccccccHHHHhhhhhhhccccCHHHHhhccccCCCccceeeehhhcccccccccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHhHHHHhcCCCCHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Q 010980 399 WEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINELSGRIDLDAILRDAEALCIC 463 (496)
Q Consensus 399 WD~~l~~g~~~~fl~~valAiL~~~r~~IL~~~~d~~eil~~L~~lp~~iD~d~ll~~A~~L~~~ 463 (496)
|+++|+..+..+|++|++.|+|.+..+.|+.+..+++++++.++.+....|...++..|..+...
T Consensus 379 WEvlw~~~~~~~f~~~~~~~~l~~~~~~l~~~~~~~~e~l~~i~~~~~~~d~~~~~~~A~~~~~~ 443 (488)
T KOG2197|consen 379 WEVLWTDLPSPHFHLYVAPAILNKDPQTLMEQGKSFNEVLKHVNLLSEKADVLWVLVRAEALERQ 443 (488)
T ss_pred HHHHHhcCccchHHHHHHHhhhhcchHHHHhcCccchhHHhhcccccccchhhhHHHHHHHHHHH
Confidence 99999988888999999999999999999999889999999999999999999999999988654
No 9
>PF00566 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR000195 Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, imply that these domains are GTPase activator proteins of Rab-like small GTPases [].; GO: 0005097 Rab GTPase activator activity, 0032313 regulation of Rab GTPase activity, 0005622 intracellular; PDB: 2G77_A 1FKM_A 3HZJ_A 3QYE_A 2QFZ_A 3QYB_A 2QQ8_A 3DZX_A 3QWL_A.
Probab=100.00 E-value=6.9e-35 Score=279.02 Aligned_cols=212 Identities=33% Similarity=0.615 Sum_probs=165.9
Q ss_pred hHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCChHHHhhhhhhhhhcccccccccccCCCccccCCC
Q 010980 199 HKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGD 278 (496)
Q Consensus 199 ~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~~~~~~~~~~~~e~~~qI~kDV~RT~~~~~~F~~~ 278 (496)
+++|+.+|+.|+|+.+ .. ...|.....++...............+..++|++||.||+++...+ .
T Consensus 1 ~~~R~~vW~~ll~~~~----~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~Dv~rt~~~~~~~--~ 65 (214)
T PF00566_consen 1 HSLRGQVWKILLGIEP----NY---------SNNYQDEKNQWEQIESKSSNSNKLDNKIFEQIDKDVNRTFPNSFLF--K 65 (214)
T ss_dssp -CCHHHHHHHHCTCSC----HH---------HHHHHHHHHHHHHHHHHHHHCTSTCHTCHHHHHHHHCTSSTSCCCS--T
T ss_pred CChHHHHHHHHHccch----hh---------hhhHHHHhhhhhhhhHHHHHhccccchHHHHHHHhhhhhcccchhh--h
Confidence 3579999999999965 11 1111111111111111111112222345679999999999955333 3
Q ss_pred CChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChHHHHHHHHHHH-HhcCCCCCCCcchhhhHHHHHHHHHH
Q 010980 279 DNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALM-ERLGPNFNRDQNGMHSQLFALSKLVE 357 (496)
Q Consensus 279 ~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~~aFw~f~~Lm-~~~~~~f~~~~~gl~~~l~~l~~LL~ 357 (496)
...+++.|.+||.+|+.++|++||+|||++|+++++.++.+|++|||||++++ ......|..+.+++...+..++.+++
T Consensus 66 ~~~~~~~l~~iL~~~~~~~~~~~Y~qG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 145 (214)
T PF00566_consen 66 NEQNQKSLERILSAYAKYNPDVGYCQGMNDIAAPLLLVFLDEEEAFWCFVQLLNYYLPDFFQPNFKGLQKILKIFEQLLK 145 (214)
T ss_dssp THHHHHHHHHHHHHHHHHTTTTSS-TTHHHHHHHHHHTCSHHHHHHHHHHHHHTHHGGGGTSTTHHHHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHHHhccccccccccchhhhhhhhhhhhcccccchhccccchhcccccccccccccccchhhhhHHHHHH
Confidence 45678999999999999999999999999999999988778999999999999 45556777777899999999999999
Q ss_pred HhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHHHHHhhccchhH-HHHHHHHHHHHhHHHHh
Q 010980 358 LLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHL-HLYVCVAILKRYRNKIM 428 (496)
Q Consensus 358 ~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD~~l~~g~~~~f-l~~valAiL~~~r~~IL 428 (496)
.++|+||+||++.++++..|+++||.++|++.+|.+.++|||| ++.+|. ++ ++++|+|||+..|++||
T Consensus 146 ~~~P~l~~~l~~~~~~~~~~~~~w~~~lF~~~l~~~~~~~lwD-~l~~g~--~~~l~~~~lail~~~~~~il 214 (214)
T PF00566_consen 146 KHDPELYNHLKQLGVDPEIYAFPWFLTLFSRSLPFDDVLRLWD-FLLEGY--KFFLFFIALAILKYLRDQIL 214 (214)
T ss_dssp HHTHHHHHHHHHTT-GGHHHHHHHHHTTTTTTS-HHHHHHHHH-HHHHCT--THHHHHHHHHHHHHTHHHHH
T ss_pred hhhhhhhhhhhhhhhhhhhhhhhhhHhhcCCcCCHHHHHHHHH-HHHcCC--CcHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999 666774 45 89999999999999987
No 10
>KOG2222 consensus Uncharacterized conserved protein, contains TBC, SH3 and RUN domains [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=2.4e-33 Score=282.56 Aligned_cols=258 Identities=21% Similarity=0.405 Sum_probs=222.8
Q ss_pred CCCCCHHHHHHHHHhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCChHHHhhhhhhhhhcc
Q 010980 180 GRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKG 259 (496)
Q Consensus 180 ~~~~~~~~Lr~~l~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~~~~~~~~~~~~e~~~ 259 (496)
|.....+++++.+..+|||+.+|+.+|+-|.|... ..+.....|+.++++.....+. +-.
T Consensus 154 ~~~~ktdk~~~llkeggiphslr~~lw~rlsga~~----------kkk~ae~sy~~ilk~~andk~~----------~~~ 213 (848)
T KOG2222|consen 154 GMELKTDKFEELLKEGGIPHSLRAFLWMRLSGALA----------KKKDAETSYEDILKACANDKLM----------IGK 213 (848)
T ss_pred ccccchHHHHHHHHcCCCCcchhHHHHHHhhhhhh----------hhccccccHHHHHHHhcccccc----------hhH
Confidence 55567789999887788999999999999999843 2334456688888775433221 124
Q ss_pred cccccccccCCCccccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChHHHHHHHHHHHHhcCC-C-
Q 010980 260 LIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGP-N- 337 (496)
Q Consensus 260 qI~kDV~RT~~~~~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~~aFw~f~~Lm~~~~~-~- 337 (496)
||++|+-|+.|++..|...++.+.+.|+|||.+.++..|++||||||.-|+|.+|+++ .|+.||||+..+++.+.+ +
T Consensus 214 qiekdllr~lpnn~cf~k~n~~gi~~lrrilk~ia~ifpdigycqg~gviva~lllf~-~ee~afwmmaaiiedilp~nf 292 (848)
T KOG2222|consen 214 QIEKDLLRILPNNACFSKKNGEGIEALRRILKCIAFIFPDIGYCQGMGVIVACLLLFC-EEENAFWMMAAIIEDILPANF 292 (848)
T ss_pred HHHHHHHHhCCCcceeeCCCCcchHHHHHHHhhheeecCCcccccCccHHHHHHHHHh-cchhHHHHHHHHHHHhcCchh
Confidence 9999999999999999999999999999999999999999999999999999999999 599999999999999887 4
Q ss_pred CCCCcchhhhHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHHHHHhhccchhHHHHHHH
Q 010980 338 FNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCV 417 (496)
Q Consensus 338 f~~~~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD~~l~~g~~~~fl~~val 417 (496)
|....-|++..-.+...|++-+.|+|-..|+.++++.++....||+|+|+..|-....+||||.||.+| .-.++.+.+
T Consensus 293 ysqtllgiqaderv~~~li~~~l~~ldeal~~~dielslitl~w~ltlf~nv~~~killriwd~~fy~g--~i~ifql~i 370 (848)
T KOG2222|consen 293 YSQTLLGIQADERVMHHLIACHLPDLDEALEDHDIELSLITLHWFLTLFANVFHMKILLRIWDFFFYEG--GINIFQLII 370 (848)
T ss_pred hhhhHhccchhHHHHHHHHHhccCchhHHHHhccceeeehHHHHHHHHHHHHHHHHHHHHHHHhheecC--cchhHHHHH
Confidence 556678999999999999999999999999999999999999999999999999999999999999776 456788999
Q ss_pred HHHHHhHHHHhcC---CCCHHHHHHHHHhCCCCC-CHHHHHHHHHHH
Q 010980 418 AILKRYRNKIMGE---QMDFDTLLKFINELSGRI-DLDAILRDAEAL 460 (496)
Q Consensus 418 AiL~~~r~~IL~~---~~d~~eil~~L~~lp~~i-D~d~ll~~A~~L 460 (496)
.||+..++.|.+. .-+..+|...|..+|... |++.++..|-..
T Consensus 371 ~ilkmkeqdi~~iaettensa~if~als~ip~~vtdve~l~~~~~~~ 417 (848)
T KOG2222|consen 371 GILKMKEQDIKEIAETTENSADIFNALSDIPAEVTDVEKLFEQAGEF 417 (848)
T ss_pred HHHHhhHHHHHHHHHhcccHHHHHHHHHhCCchhhhHHHHHHHHhhc
Confidence 9999999888754 226788999999999764 888888776543
No 11
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=99.97 E-value=2.4e-30 Score=271.31 Aligned_cols=248 Identities=21% Similarity=0.349 Sum_probs=216.9
Q ss_pred HHHHhchhccCCCCCH---HHHHHHHHhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCChH
Q 010980 170 EEWTTFLDNEGRVMDS---NALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPE 246 (496)
Q Consensus 170 ~~W~~~l~~~~~~~~~---~~Lr~~l~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~~~ 246 (496)
..|.+.+.+.|+.++. .++++ +.+.|||...|+++|..+.|. -..+..+.++|.++.+....
T Consensus 174 k~W~~~f~~~G~~~~~~qt~~~~K-lv~~gipe~~rgeiW~l~sGa----------v~~~l~~~Geygkll~~~~G---- 238 (671)
T KOG4347|consen 174 KFWKKYFIKDGPNMNQIQTILLRK-LLYNGFPEDPRGEIWYLASGA----------VASLLLNPGEYGKLLHSVTG---- 238 (671)
T ss_pred HHHHHHHHHhcccccHHHHHHHHH-HHHHhcCCChHHHHHHhhhHH----------HHHhhcCcHHhhhhhhcccC----
Confidence 4599999999998765 57888 669999999999999999998 44566788999999876432
Q ss_pred HHhhhhhhhhhcccccccccccCCCccccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChHHHHHH
Q 010980 247 QARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWC 326 (496)
Q Consensus 247 ~~~~~~~~~e~~~qI~kDV~RT~~~~~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~~aFw~ 326 (496)
+.+.....|++|++|..|+|+-|+.+. +...|+|||.||++.||++||||-||.+++.+++++ .|++|||+
T Consensus 239 ------~~~~a~eEIE~Dl~rsLpEhpA~Q~e~--gi~aLR~vL~Aya~~Np~vGYcQaMNIV~s~lll~~-~EEeafwl 309 (671)
T KOG4347|consen 239 ------KRSVATEEIEPDLGRSLPEHPAFQSEP--GIAALRRVLTAYAWSNPEVGYCQAMNIVGSELLLFC-KEEEAFWL 309 (671)
T ss_pred ------CcccccccccCCCCCCCCcchhhhCCC--chhhHHHHHHhhhccCCchhHHHHHHHHHHhhhhhh-ccchHHHH
Confidence 222345689999999999999999865 569999999999999999999999999999999999 69999999
Q ss_pred HHHHHHhcCCCCC-CCcchhhhHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHHHHHhh
Q 010980 327 FVALMERLGPNFN-RDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTH 405 (496)
Q Consensus 327 f~~Lm~~~~~~f~-~~~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD~~l~~ 405 (496)
++++.+++.+.|+ ....|......+|+.|++...|.||.|+...+ ...+....||+++|...+|++..+||-|+||.+
T Consensus 310 l~~lce~~ip~yys~~vvGtliDQ~vfe~lve~~lP~l~~~~~~l~-~l~~Vsl~WFlslFls~m~le~a~~ilD~FF~e 388 (671)
T KOG4347|consen 310 LSKLCEIYIPDYYSKTVVGTLIDQSVFEELVEDTLPVLGEHLAVLG-QLSTVSLSWFLSLFLSLMPLEYAVRILDCFFYE 388 (671)
T ss_pred HHHHHHHhcccccchhhhhhHHHHHHHHHHHHHhhhHHHHHhhhhc-ccceEeeHHHHHHHHHHcchHHHHHHHhhhhhc
Confidence 9999999988654 55678777888899999999999999999999 667789999999999999999999999999988
Q ss_pred ccchhHHHHHHHHHHHHhHHHHhcCCCCHHHHHHHHHhCC
Q 010980 406 YLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINELS 445 (496)
Q Consensus 406 g~~~~fl~~valAiL~~~r~~IL~~~~d~~eil~~L~~lp 445 (496)
| ...++-|++||++.+.+.|+++. |-.++|..+.++-
T Consensus 389 G--~rvlFqiaLail~~N~~~il~~~-dDge~~~vl~~y~ 425 (671)
T KOG4347|consen 389 G--PRVLFQIALAILKQNAERILSAT-DDGEAMMVLGNYF 425 (671)
T ss_pred c--cHHHHHHHHHHHHhhHHHhcccC-CchHHHHHHHHHH
Confidence 8 68999999999999999999986 6667777776653
No 12
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=99.97 E-value=6e-30 Score=263.93 Aligned_cols=243 Identities=21% Similarity=0.365 Sum_probs=209.8
Q ss_pred HhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCChHHHhhhhhhhhhcccccccccccCCCc
Q 010980 193 FYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLIDKDVVRTDRSV 272 (496)
Q Consensus 193 ~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~~~~~~~~~~~~e~~~qI~kDV~RT~~~~ 272 (496)
.+.|+|+.+|+.+|..||+.-. + ....|-.+ .+..+. ....||+.||+|+....
T Consensus 352 a~vdvpp~~R~~iW~aLL~l~e-~------------~~a~y~~I-Dk~Ts~------------~tdrqievdiprchQyd 405 (725)
T KOG1093|consen 352 AYVDVPPLYRGFIWAALLQLEE-N------------HTAFYTLI-DKGTSH------------STDRQIEVDIPRCHQYD 405 (725)
T ss_pred hccCCChhHhHHHHHHHhcCcc-c------------cchhhhhh-hcCCCC------------cchhhhhcccchhhhcc
Confidence 4789999999999999998721 1 12233333 222221 12359999999998777
Q ss_pred cccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhc-CChHHHHHHHHHHHHhcCCC-CCC-CcchhhhHH
Q 010980 273 TFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVM-EDESQSFWCFVALMERLGPN-FNR-DQNGMHSQL 349 (496)
Q Consensus 273 ~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~-~dE~~aFw~f~~Lm~~~~~~-f~~-~~~gl~~~l 349 (496)
...... .+++.|+|+|.||+..+|...|.||+..+|+||++.. .+|..||-|+..++-++..+ |.. +..-++..+
T Consensus 406 ~~lsSp--~~~r~lrRvLkawv~~s~~fvywqgldsLa~PFl~ln~Nne~laF~~~~~fi~kycq~fflkdns~vikeyL 483 (725)
T KOG1093|consen 406 ELLSSP--KGHRKLRRVLKAWVTWSPIFVYWQGLDSLAAPFLYLNFNNELLAFACIATFIPKYCQHFFLKDNSNVIKEYL 483 (725)
T ss_pred cccCCH--HHHHHHHHHHHHHHhcCcceeecCCChhhhhhHHHHhcCchHHHHHHHHHHHHHHHHHHHhhcCchhHHHHH
Confidence 666654 3679999999999999999999999999999999875 57999999999999998775 444 345678899
Q ss_pred HHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHHHHHhhccchhHHHHHHHHHHHHhHHHHhc
Q 010980 350 FALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMG 429 (496)
Q Consensus 350 ~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD~~l~~g~~~~fl~~valAiL~~~r~~IL~ 429 (496)
..|++++..+||+|++||..+|+.+.+|+++||+|+|++.||.+.++.+||-++..+ ..|.+++++||+...|+.||.
T Consensus 484 s~f~~l~AfhDpeL~qHl~~~~f~~eLyAiPwflT~Fshvlpl~kil~LwD~lml~~--~SFplmi~vAil~~lR~~LLa 561 (725)
T KOG1093|consen 484 SMFSQLLAFHDPELLQHLIDIGFIPELYAIPWFLTMFSHVLPLHKILHLWDNLMLGH--SSFPLMIGVAILIQLRDPLLA 561 (725)
T ss_pred HHHHHHHHhcCHHHHHHHHHcCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHhcCC--CccHHHHHHHHHHHhhhhhhh
Confidence 999999999999999999999999999999999999999999999999999999977 459999999999999999997
Q ss_pred CCCCHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhccCC
Q 010980 430 EQMDFDTLLKFINELSGRIDLDAILRDAEALCICAGENG 468 (496)
Q Consensus 430 ~~~d~~eil~~L~~lp~~iD~d~ll~~A~~L~~~~~e~~ 468 (496)
+ +|.|.+.++.++| ++|+|.+++..+.++..+|.+-
T Consensus 562 ~--nfne~illf~d~p-dldId~~Ires~~l~e~tP~si 597 (725)
T KOG1093|consen 562 C--NFNECILLFSDLP-DLDIDVCIRESYHLMETTPKSI 597 (725)
T ss_pred C--CchhheeeeccCC-cccHHHHHHHHhhhhhCCCCCC
Confidence 6 9999999999999 9999999999999999999884
No 13
>KOG4436 consensus Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains) [General function prediction only]
Probab=99.97 E-value=7e-30 Score=271.28 Aligned_cols=257 Identities=21% Similarity=0.384 Sum_probs=219.6
Q ss_pred HHHHhchhc--cCCCCCHHHHHHHHHhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCChHH
Q 010980 170 EEWTTFLDN--EGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQ 247 (496)
Q Consensus 170 ~~W~~~l~~--~~~~~~~~~Lr~~l~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~~~~ 247 (496)
..|++++.. .+...+.+.+-.. .+.|+|..-|+++|.+|.-.+..+.... ..++...-.|+.++++
T Consensus 550 ~~wek~~e~~~~~~k~d~ed~~~~-l~~gvprsrrgeiwtflA~q~~~~~~l~---~~kr~~~~p~~~llkq-------- 617 (948)
T KOG4436|consen 550 ETWEKILERTRIKIKKDMEDLHSA-LRTGVPRSRRGEIWTFLAEQHSLNHALP---DKKRPPDFPYKELLKQ-------- 617 (948)
T ss_pred HHHHHHHHHhhhcccccHHHHHHH-HHccCchhhhHHHHHHHHHHHHHhccCC---cccCCCCCChHHHHHH--------
Confidence 679998876 2333578888884 5999999999999999985543222111 0011112235555443
Q ss_pred HhhhhhhhhhcccccccccccCCCccccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChHHHHHHH
Q 010980 248 ARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCF 327 (496)
Q Consensus 248 ~~~~~~~~e~~~qI~kDV~RT~~~~~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~~aFw~f 327 (496)
..+..+.|..|+-||||+|++|...-+.++..|+++|.+|+..+|++|||||+.++|++||+.| +|+.||-++
T Consensus 618 ------Lte~qhAi~idlgrtfp~h~~~~~qlg~gqlsl~n~Lkayslld~e~gycqg~~fv~gvlllh~-~e~~afell 690 (948)
T KOG4436|consen 618 ------LTEQQHAILIDLGRTFPTHPYFSDQLGLGQLSLFNLLKAYSLLDPEVGYCQGLSFVAGVLLLHM-SEENAFELL 690 (948)
T ss_pred ------HHHHHHHHHHhhccccCCCHHHHhhccccHHHHHHHHHHhcccCccccccCcchhhhhhhHhhc-chhhHHHHH
Confidence 3355568999999999999999999999999999999999999999999999999999999999 799999999
Q ss_pred HHHHHh--cCCCCCCCcchhhhHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHHHHHhh
Q 010980 328 VALMER--LGPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTH 405 (496)
Q Consensus 328 ~~Lm~~--~~~~f~~~~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD~~l~~ 405 (496)
..||.. +...|.+++..++.+++.+++++..+.++||+|+++++|.|..|+.+||+|+|+..||+..+.|++|.++..
T Consensus 691 k~LM~~r~~r~qy~pdm~~lq~qmyqLsrl~hd~hrdlyn~le~~ei~pslyAapw~lt~fasQf~lGfvarvfd~~flq 770 (948)
T KOG4436|consen 691 KFLMFDRGMRKQYRPDMKKLQIQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWFLTVFASQFPLGFVARVFDLIFLQ 770 (948)
T ss_pred HHHHHHHhhHhhhchHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcccChHHhhhHHHHHHHHhhCcchHHHHHHHHHHhh
Confidence 999975 445799999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccchhHHHHHHHHHHHHhHHHHhcCCCCHHHHHHHHHhCCCCC
Q 010980 406 YLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINELSGRI 448 (496)
Q Consensus 406 g~~~~fl~~valAiL~~~r~~IL~~~~d~~eil~~L~~lp~~i 448 (496)
| ..+++.+++++|..++..|++++ +|++|+.|+++..+.+
T Consensus 771 ~--tevifK~a~~llsv~k~~l~e~d-n~e~i~d~~k~~~p~~ 810 (948)
T KOG4436|consen 771 G--TEVIFKVALSLLSVHKQLLLEKD-NFEEIVDFLKTTLPKM 810 (948)
T ss_pred c--cchhhhhHHHHHHhhHHHHHhhh-hHHHHHHHHHHhhhhh
Confidence 7 67999999999999999999997 9999999999876454
No 14
>KOG1091 consensus Ypt/Rab-specific GTPase-activating protein GYP6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=1.4e-27 Score=246.48 Aligned_cols=264 Identities=25% Similarity=0.351 Sum_probs=208.1
Q ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCC---------------------hHHHhhhhhhhhhc
Q 010980 200 KLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSIS---------------------PEQARRFTKFRERK 258 (496)
Q Consensus 200 ~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~---------------------~~~~~~~~~~~e~~ 258 (496)
..|+..|+.+||+.|.+.+.+ ..-....+..|.++...+...+ ......+....|..
T Consensus 28 ~~Rgv~Wrl~L~vLp~~~ss~--id~~~~~ra~~r~~r~~~L~dPh~~k~~~s~d~~idnPLSq~~~S~W~rfF~d~EL~ 105 (625)
T KOG1091|consen 28 NLRGVRWRLLLGVLPSENSSW--IDNLRRLRANYRRLRRRLLIDPHNLKENHSPDLPIDNPLSQNPQSVWNRFFRDAELE 105 (625)
T ss_pred hhhhHHHHHhheecCCCchhH--HHHHHHHhhhhhccccccccCccccccccCCCcccCCccccCCCchhhhhcCcHHHH
Confidence 469999999999999875543 4444556677777644332111 01133444456788
Q ss_pred ccccccccccCCCc-cccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCC------------------
Q 010980 259 GLIDKDVVRTDRSV-TFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMED------------------ 319 (496)
Q Consensus 259 ~qI~kDV~RT~~~~-~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~d------------------ 319 (496)
+.|++||.||||.+ .+|+.+. .+..|++||..|+.-+|.+||-|||+.+.||+++|...
T Consensus 106 ~~i~qDvsRtfPe~~~fFqs~~--~q~mLr~iLl~~~lehp~i~YrQGMHElLAPl~fVl~~D~q~l~h~se~~~~~l~f 183 (625)
T KOG1091|consen 106 KTIDQDVSRTFPEHSLFFQSPE--VQGMLRRILLLYALEHPEIGYRQGMHELLAPLLFVLHVDNQALLHVSESLFDKLGF 183 (625)
T ss_pred HhhcchhhccCcchhhhhcCch--hhHHHHHHHHHHHhhchhhhHHhhhhhhhhhhhhheehhHHHHHHHHHhhhhhcCc
Confidence 99999999999999 7888754 46899999999999999999999999999999988631
Q ss_pred ------------hHHHH--HHHHHHHHhcCCC------------------------CCCCcchhhhHHHHHHHHHHHhCh
Q 010980 320 ------------ESQSF--WCFVALMERLGPN------------------------FNRDQNGMHSQLFALSKLVELLDN 361 (496)
Q Consensus 320 ------------E~~aF--w~f~~Lm~~~~~~------------------------f~~~~~gl~~~l~~l~~LL~~~~P 361 (496)
+.+++ -+|+.+|..-..+ +..+.+.+......+..++...|+
T Consensus 184 ~E~d~iy~~~y~k~d~dn~~lqs~lmls~~~~~e~e~g~~~~e~~ie~day~~~d~l~~~l~~v~e~~~~~~~lL~~~D~ 263 (625)
T KOG1091|consen 184 EERDVIYNFLYLKTDLDNTELQSVLMLSDEYGYEEELGIVLSEKLIEHDAYVMFDALMPGLPPVFEANFAQYHLLAKVDK 263 (625)
T ss_pred chhhhhhhHHHHhhhccchhHHHHHHhhhccccccCcceecCcccCCcCcccchhhhcccchhHHHHhhhhhhhhhhccH
Confidence 22233 2444454321100 112223344556678899999999
Q ss_pred hhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHH-HHHhhccchhHHHHHHHHHHHHhHHHHhcCCCCHHHHHHH
Q 010980 362 PLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWE-VLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKF 440 (496)
Q Consensus 362 ~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD-~~l~~g~~~~fl~~valAiL~~~r~~IL~~~~d~~eil~~ 440 (496)
.||.||.+.+|.+.+|..||...||.|+||+.+++-+|| +++.+++...++.++.+|||..+|+.|++. +....+++
T Consensus 264 ~Lh~HL~~l~i~pqifgiRWlRlLFGREfpL~dLLiVWD~~l~~d~pr~~Lv~~m~VsmLL~IRd~Llss--~~~tcL~~ 341 (625)
T KOG1091|consen 264 SLHSHLVELGIEPQIFGIRWLRLLFGREFPLQDLLIVWDHVLIFDSPRGILVACMFVSMLLYIRDSLLSS--EYQTCLQY 341 (625)
T ss_pred HHHHHHHhcCCchHHHHHHHHHHHHcchhHHHHHHHHhhhhhhccCchHHHHHHHHHHHHHHHHHHHHHh--cchhHHHH
Confidence 999999999999999999999999999999999999999 888888888889999999999999999965 77779999
Q ss_pred HHhCCCCCCHHHHHHHHHHHHHHhccCCC
Q 010980 441 INELSGRIDLDAILRDAEALCICAGENGA 469 (496)
Q Consensus 441 L~~lp~~iD~d~ll~~A~~L~~~~~e~~~ 469 (496)
+-++|..+|++.+|++|..+...+|.+++
T Consensus 342 Lm~yP~~~Dv~~~iekAl~l~~~~~K~n~ 370 (625)
T KOG1091|consen 342 LMNYPEIIDVDKFIEKALHLQKLFPKSNA 370 (625)
T ss_pred HhcCCCcCcHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999987777554
No 15
>KOG1102 consensus Rab6 GTPase activator GAPCenA and related TBC domain proteins [General function prediction only]
Probab=99.93 E-value=5.8e-26 Score=236.70 Aligned_cols=241 Identities=24% Similarity=0.420 Sum_probs=198.6
Q ss_pred CCHHHHHHHHHhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCChHHHhhhhhhhhhccccc
Q 010980 183 MDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLID 262 (496)
Q Consensus 183 ~~~~~Lr~~l~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~~~~~~~~~~~~e~~~qI~ 262 (496)
....++.. ....|||.++|+.+|..+++.-- +.........|... .....+.. ..+|
T Consensus 133 ~~~~~l~~-~~~~gip~~~r~~~W~l~~~~~~--------~~~~~~~~~l~~~~---~~~~~~~~----------~~~~- 189 (397)
T KOG1102|consen 133 RRPLKLSR-RVLVGIPDELRGLVWQLLLYAVE--------ESLFDSLDELYRLQ---LDEPEPHE----------SEII- 189 (397)
T ss_pred ccHHHHHH-HhhccccHHHHHHHHHHhcccHh--------hhhhhhHHHHHHHh---hccCCCch----------hHHH-
Confidence 34567776 45899999999999999998610 00000011111111 11111111 1266
Q ss_pred ccccccCCCccccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChHHHHHHHHHHHHhcC-CCCCCC
Q 010980 263 KDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLG-PNFNRD 341 (496)
Q Consensus 263 kDV~RT~~~~~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~~aFw~f~~Lm~~~~-~~f~~~ 341 (496)
+|+.||+|.+..|....+.++..|.+||.+|+.++|++||||||..++++++.++. |++|||+++.+|.... ..|..+
T Consensus 190 ~d~~Rt~~~~~~f~~~~~~~q~sl~~vl~a~s~~~~~~gy~q~m~~~a~~ll~~~~-ee~af~~lv~l~~~~~~~~~~~~ 268 (397)
T KOG1102|consen 190 RDLSRTFPAHLLFRKRYGVGQRSLYNVLKAYSLYDPEVGYCQGMSSIAAPLLLYLP-EEEAFPLLVKLMKNYGLDLLSPG 268 (397)
T ss_pred hhccCcCcchhhhhhhcCcccccccccchhhcccCCCcccccchhhHhhhhhccCc-hhhhhhhhhhhhhccchhccccc
Confidence 99999999999999988889999999999999999999999999999999999995 9999999999998653 345777
Q ss_pred cchhhhHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q 010980 342 QNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILK 421 (496)
Q Consensus 342 ~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD~~l~~g~~~~fl~~valAiL~ 421 (496)
+.+++..+..+..+++...|.++.|+...++...+|+..|++|+|+..+|++.+.|+||+++.+| ..+++.+++|+++
T Consensus 269 ~~~l~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~s~w~~t~f~~k~p~~~~~ri~d~~~~~g--~~i~~~~~~~l~~ 346 (397)
T KOG1102|consen 269 FSGLQRSFRQLQRLLKELIPKLLDHLLPQGIELSMYASQWFLTLFAAKFPLELVLRIWDALFVEG--VSILFRFSLALLK 346 (397)
T ss_pred CCchhhhHHHHHHHHHHhChhhhhhccccccccceeccceeeEeeeccccHHHHHHHhHHHHHhc--hHHHHHHHHHHhh
Confidence 88999999999999999999999999999999999999999999999999999999999999999 6789999999999
Q ss_pred HhHHHHhcCCCCHHHHHHHHHhCC-CCCCHH
Q 010980 422 RYRNKIMGEQMDFDTLLKFINELS-GRIDLD 451 (496)
Q Consensus 422 ~~r~~IL~~~~d~~eil~~L~~lp-~~iD~d 451 (496)
...+.++ +.+++.+++++.+.+ ...|..
T Consensus 347 ~~~~~~~--~~~~e~~~~~l~~~~~~~~~~~ 375 (397)
T KOG1102|consen 347 HKADDLL--DLDFESLLSYLRVDLPKSYDSE 375 (397)
T ss_pred hhhHHHh--hccHHHHHHHHhcccHhhcCcc
Confidence 9999999 558999999997654 334433
No 16
>KOG2595 consensus Predicted GTPase activator protein [Signal transduction mechanisms]
Probab=99.93 E-value=1.3e-25 Score=219.98 Aligned_cols=258 Identities=18% Similarity=0.221 Sum_probs=205.1
Q ss_pred CCCHHHHHHHHHh-CC-CChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCChHHHhhhhhhhhhcc
Q 010980 182 VMDSNALRKRIFY-GG-VDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKG 259 (496)
Q Consensus 182 ~~~~~~Lr~~l~~-~G-IP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~~~~~~~~~~~~e~~~ 259 (496)
..+.+.||+.... +| +.+++|+.||+.|+|..-..... ..|.+..+.+ +..+
T Consensus 45 ~~dv~~Lr~i~l~p~Glv~dslRk~vWp~L~~~~~n~~~~-----------~~~~~~~q~h---------------kd~n 98 (395)
T KOG2595|consen 45 KKDVDALRYIGLSPGGLVNDSLRKDVWPELLALNINHLDA-----------TSTLTPVQKH---------------KDYN 98 (395)
T ss_pred hccHHHHHHhccCCCccccHHHHHHHHHHHhccccCCCcc-----------cccCChhhhC---------------cccc
Confidence 3678888874433 23 57899999999999985433211 1122222111 2246
Q ss_pred cccccccccCCCccccCC--CCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChHHHHHHHHHHHHhcC-C
Q 010980 260 LIDKDVVRTDRSVTFFDG--DDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLG-P 336 (496)
Q Consensus 260 qI~kDV~RT~~~~~~F~~--~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~~aFw~f~~Lm~~~~-~ 336 (496)
|+..||.|++...+.=-. .....++.|..++...-..+|.+.|.||.+|||.+|++++ .|.+|+-+...|-.... +
T Consensus 99 QV~LDv~RSl~rfppg~p~~~R~~Lq~qL~~LI~rVl~~yP~L~YYQGyHDI~~tfLLv~-gE~~Al~l~E~L~~~~lrd 177 (395)
T KOG2595|consen 99 QVILDVERSLGRFPPGIPKELRLQLQKQLTELILRVLRKYPTLNYYQGYHDIVVTFLLVV-GELEALSLMEELSTLHLRD 177 (395)
T ss_pred eEEEehhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCcchhcchhHHHHHHHHhh-hhHhhhHHHHHHHHHHHHH
Confidence 999999999755431000 0112456777777777789999999999999999999999 59999999888886433 3
Q ss_pred CCCCCcchhhhHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCc-hHHHHHHHHHHHhhccchhHHHHH
Q 010980 337 NFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFE-YEKTMRLWEVLWTHYLSEHLHLYV 415 (496)
Q Consensus 337 ~f~~~~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p-~~~vlRLWD~~l~~g~~~~fl~~v 415 (496)
...+.+.+..+++..+..+++..+|+||+.|++.++.+. |+..|++|||++.+. +..++|++|+|++..+ -..+|+
T Consensus 178 fM~~Tld~t~~qL~~i~~iIk~~nP~Ly~~l~~aevgtl-FaLsWllTWFaH~L~~~~~vvRlfD~Flas~p--l~piyv 254 (395)
T KOG2595|consen 178 FMLPTLDFTVRQLRLISPIIKEVNPELYQFLQSAEVGTL-FALSWLLTWFAHNLKDIRIVVRLFDFFLASHP--LLPIYV 254 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHhhcccce-ehhhHHHHHHhhcchhHHHHHHHHHHHHhcCc--chhHHH
Confidence 445667788889999999999999999999999998875 999999999999997 9999999999999774 377899
Q ss_pred HHHHHHHhHHHHhcCCCCHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhccCCC
Q 010980 416 CVAILKRYRNKIMGEQMDFDTLLKFINELSGRIDLDAILRDAEALCICAGENGA 469 (496)
Q Consensus 416 alAiL~~~r~~IL~~~~d~~eil~~L~~lp~~iD~d~ll~~A~~L~~~~~e~~~ 469 (496)
++|++...+.+|+++..|+.-+..+|+.+|.++..|++|+.+-.++...|.+-.
T Consensus 255 ~A~vvL~r~~eIl~~~~dms~~H~lLs~iPq~lp~d~lik~s~~~i~~~~~t~~ 308 (395)
T KOG2595|consen 255 YAAVVLYRRSEILKCDCDMSLLHGLLSTIPQDLPYDTLIKESVLLITRKPATLL 308 (395)
T ss_pred HHHHhhhhHHHHHHHHhhhHHHHHHHHhCccccCHHHHHHHHHHHHhcCChhhh
Confidence 999999999999999989999999999999999999999999988887666543
No 17
>KOG2221 consensus PDZ-domain interacting protein EPI64, contains TBC domain [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.88 E-value=9.2e-24 Score=195.62 Aligned_cols=190 Identities=20% Similarity=0.366 Sum_probs=161.2
Q ss_pred HHHHHhchhccCCCCC--HHHHHHHHHhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCChH
Q 010980 169 SEEWTTFLDNEGRVMD--SNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPE 246 (496)
Q Consensus 169 ~~~W~~~l~~~~~~~~--~~~Lr~~l~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~~~ 246 (496)
+.+|..++++|...++ .+++|.++ ++|||+.+|+..|++|.|..... .+++..|..+..+- .
T Consensus 75 eskwL~mldnw~~~m~kk~~~ir~rc-rkgippslr~Raw~ylsGa~~~~----------~~np~~~~~~~~~p-----G 138 (267)
T KOG2221|consen 75 ESKWLHMLDNWHEEMRKKQKKIRPRC-RKGIPPSLRGRAWRYLSGAPSPP----------PKNPVVFDELGPAP-----G 138 (267)
T ss_pred HHHHHHHHHHHHHHHHhccccccchh-hcCCCcccchhHHHhhcCCCCCC----------CCCcchhhhccCCC-----C
Confidence 4788888888766543 35677765 99999999999999999995432 23566666665431 1
Q ss_pred HHhhhhhhhhhcccccccccccCCCccccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChHHHHHH
Q 010980 247 QARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWC 326 (496)
Q Consensus 247 ~~~~~~~~~e~~~qI~kDV~RT~~~~~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~~aFw~ 326 (496)
+ -...+-|++|++|-||.|.+|......++..|+|+|.+|.+++|+.||||+-..|++++++.+. +++||||
T Consensus 139 ~-------p~t~e~i~kdl~rqfp~hemf~s~~k~gkqelfr~lka~ti~~pe~g~cq~qapiaa~llmhmp-~rdaf~~ 210 (267)
T KOG2221|consen 139 D-------PKTAEGIHKDLHRQFPFHEMFGSSGKTGKQELFRVLKAYTIYKPEEGYCQAQAPIAAVLLMHMP-ARDAFWC 210 (267)
T ss_pred C-------CcchhhhccccccCCCcccccccccccchHHHHHHHHHHHHhCchhhhhhhhchHHHHHHhccc-HHHHHHH
Confidence 1 1233589999999999999999988888999999999999999999999999999999999995 8999999
Q ss_pred HHHHHHhcCCC-CCCCcchhhhHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHH
Q 010980 327 FVALMERLGPN-FNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWV 382 (496)
Q Consensus 327 f~~Lm~~~~~~-f~~~~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~Wf 382 (496)
|+.+.+++.+. |..+...++..-.+++.|+++.+|..|.||....+++..|...||
T Consensus 211 ~vqicekylqgy~~sgleaiq~dg~il~~Llkk~~~p~~rH~~~~kvdp~lym~ewF 267 (267)
T KOG2221|consen 211 FVQICEKYLQGYYSSGLEAIQNDGGILEGLLKKASPPPYRHLGGDKVDPLLYMTEWF 267 (267)
T ss_pred HHHHHHHHcccccccchhhhhcccHHHHHHHHhcCCCCCcccccCCCCHHHhhhccC
Confidence 99999998885 556677888888999999999999999999999999999999997
No 18
>KOG4436 consensus Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains) [General function prediction only]
Probab=99.63 E-value=1.5e-15 Score=162.88 Aligned_cols=252 Identities=17% Similarity=0.251 Sum_probs=201.7
Q ss_pred CCHHHHHHHHHhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCChHHHhhhhhhhhhccccc
Q 010980 183 MDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKGLID 262 (496)
Q Consensus 183 ~~~~~Lr~~l~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~~~~~~~~~~~~e~~~qI~ 262 (496)
....+|+.+ +.+|+|+..|..+|..|+...+.. + ..-.+.|.++... +..+++ .-+...|.
T Consensus 172 ~s~~~l~e~-Ve~~~p~~frli~~qlLssatd~~------q---~~I~e~~sdl~~~----s~~~Ek-----~~~~~~Ir 232 (948)
T KOG4436|consen 172 KSLHKLKEL-VEGGIPMHFRLIRWQLLSSATDRE------Q---ALIFEDYSDLAPC----SSQQEK-----ELHIGIIR 232 (948)
T ss_pred hchhhhHHH-HhcCCchHHHHHHHHHhcccccch------h---hHHHHHHHHHhhh----cchhhh-----hHHHHHHH
Confidence 345678884 599999999999999999874321 1 1234566666543 222211 12234799
Q ss_pred ccccccCCCccccCCCCCh-------hHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChHHHHHHHHHHHHhc-
Q 010980 263 KDVVRTDRSVTFFDGDDNP-------NVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERL- 334 (496)
Q Consensus 263 kDV~RT~~~~~~F~~~~~~-------~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~~aFw~f~~Lm~~~- 334 (496)
.|+.||.|.|.+|...... +++.|+++..+|+...-++|||||-+.+++.+++.+ +++.+|..++.+|..+
T Consensus 233 rdi~~~~~eh~~fke~~s~~~~~~~~~~d~LfN~~K~~~~~~~E~ifsqGs~~m~Gll~l~~-~~E~assv~~~lm~~~r 311 (948)
T KOG4436|consen 233 RDIERTYPEHYFFKEQSSTVCSDIRFAQDQLFNVAKAYSTKDLEVIFSQGSAFMVGLLLLQM-PVEEASSVKVQLMILYR 311 (948)
T ss_pred HHhhccCcceeeeccCccCCcchhHHHHHHHHHHHHHHhhhhhhhhhccchHHHHHHHHhcC-cHHHHHHHHHHHHHhhc
Confidence 9999999999999987665 689999999999999999999999999999999999 6999999999999854
Q ss_pred -CCCCCCCcchhhhHHHHHHHHHHHhCh-hhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHHHHHhhccchhHH
Q 010980 335 -GPNFNRDQNGMHSQLFALSKLVELLDN-PLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLH 412 (496)
Q Consensus 335 -~~~f~~~~~gl~~~l~~l~~LL~~~~P-~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD~~l~~g~~~~fl 412 (496)
...|.+.+..+-..+..++...+...| +|+.|+.+.+++..+|.-.||++.|...||+...-|+.|+|..+| ..+.
T Consensus 312 l~~l~kpe~~~l~~~~~q~e~~~q~~sp~dl~sH~~eq~~h~S~~~rs~flt~~ltt~Pi~~a~r~~~~f~~eg--llk~ 389 (948)
T KOG4436|consen 312 LRELSKPEMEPLGLCMFQLECTNQDQSPMDLFSHFPEQHFHTSMYARSWFLTNFLTTFPIFMAARISDTFSSEG--LLKR 389 (948)
T ss_pred ccccCCcccchhHHHHHhhcccccccchhHHhhcccccCCCccHHHHHHHHHhhcccCchhhcccccccccccc--HHHH
Confidence 457888888788888899999999999 999999999999999999999999999999999999999999877 5566
Q ss_pred HHHHHHHHHHhHH-HHhcCCCCHHHHHHHHHh-CCCCC--CHHHHHHHHH
Q 010980 413 LYVCVAILKRYRN-KIMGEQMDFDTLLKFINE-LSGRI--DLDAILRDAE 458 (496)
Q Consensus 413 ~~valAiL~~~r~-~IL~~~~d~~eil~~L~~-lp~~i--D~d~ll~~A~ 458 (496)
+++.+|++...++ .++ ..|+++..++.+. .+... +.+.+...|.
T Consensus 390 fr~~ia~~~~~~d~~~~--s~D~EG~~~~~qr~~s~~vggtp~k~~t~a~ 437 (948)
T KOG4436|consen 390 FRDSIAYLHQLRDIELE--SLDMEGMLSYFQRNRSNTVGGTPDKLRTAAW 437 (948)
T ss_pred HhhhHHHHHHHhhhhhh--ccCccccccchhhccccccCCCCchHHHHHH
Confidence 7999999944444 444 4599999999863 44444 4455544444
No 19
>KOG3636 consensus Uncharacterized conserved protein, contains TBC and Rhodanese domains [General function prediction only]
Probab=99.59 E-value=2.2e-14 Score=145.26 Aligned_cols=203 Identities=17% Similarity=0.284 Sum_probs=155.3
Q ss_pred cccccccccCCCccccCCCCChhHHHHHHHHHHHhhhcCCCCcccC--hhhhHHHHHHhcCChHHHHHHHHHHHHhcCCC
Q 010980 260 LIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQG--MSDLLSPILFVMEDESQSFWCFVALMERLGPN 337 (496)
Q Consensus 260 qI~kDV~RT~~~~~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QG--M~~Iaa~lL~v~~dE~~aFw~f~~Lm~~~~~~ 337 (496)
+|++|..|-.-...-=..+..+....|+.++..|+ .+.++-|... .-.|+-|++..-..-.+.|-||-.+++++.+.
T Consensus 69 ~lr~DC~~~~d~l~n~ee~~v~vv~dlES~iTfYC-K~Rn~~Y~~d~gWi~lL~pl~~L~lprsd~fN~F~ai~~kYIPk 147 (669)
T KOG3636|consen 69 ALRNDCRKLADGLKNKEEDKVPVVSDLESFITFYC-KKRNMDYIKDIGWITLLEPLLLLNLPRSDEFNVFFAITTKYIPK 147 (669)
T ss_pred HHHHHHHHHHhhcCCchhhccchhHhhhhHhhhhh-hccCCcccccccHHHHHHHHHHhcCCcchhhhhhHhhhhcccCC
Confidence 56666655422211111222334557777777665 4556677764 44566777766556789999999999998773
Q ss_pred C-CCCcchhhhHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHHHHHhhccchhHHHHHH
Q 010980 338 F-NRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVC 416 (496)
Q Consensus 338 f-~~~~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD~~l~~g~~~~fl~~va 416 (496)
= .++ ...+..|.-||+.++|+|..||+...++|.+|+..||-+||+.....+.+.-+||.|+-.+.. -+++|++
T Consensus 148 dcrpk----g~~Fh~FRLLlqYHdPelc~~LdtkkitPd~Y~lnWf~sLFas~~Stev~~a~WdlY~qqaDP-F~vffLa 222 (669)
T KOG3636|consen 148 DCRPK----GQIFHLFRLLLQYHDPELCNHLDTKKITPDMYTLNWFASLFASSMSTEVCHALWDLYIQQADP-FLVFFLA 222 (669)
T ss_pred CCCCC----CccchHHHHHHHhcCHHHhhhhhccccCchHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCc-eehHHHH
Confidence 2 221 124667899999999999999999999999999999999999999999999999999987753 4677889
Q ss_pred HHHHHHhHHHHhcCCCC-HHHHHHHHHhCCCCC---CHHHHHHHHHHHHHHhccCC
Q 010980 417 VAILKRYRNKIMGEQMD-FDTLLKFINELSGRI---DLDAILRDAEALCICAGENG 468 (496)
Q Consensus 417 lAiL~~~r~~IL~~~~d-~~eil~~L~~lp~~i---D~d~ll~~A~~L~~~~~e~~ 468 (496)
+-||+..+++||..+.| -+++++||.+.|..+ |+..+.+.|.....+.|++=
T Consensus 223 liiLiNake~ILq~~sdsKEe~ikfLenmp~~L~~eDvpDffsLAqyY~~KTP~sf 278 (669)
T KOG3636|consen 223 LIILINAKEEILQVKSDSKEEAIKFLENMPAQLSVEDVPDFFSLAQYYSDKTPESF 278 (669)
T ss_pred HHHhcccHHHHhhhccccHHHHHHHHHcCchhcccccchhHHHHHHHHhhcChHHh
Confidence 99999999999976544 579999999999775 77888999998888888773
No 20
>KOG2801 consensus Probable Rab-GAPs [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.22 E-value=4.6e-10 Score=109.05 Aligned_cols=249 Identities=17% Similarity=0.227 Sum_probs=176.5
Q ss_pred CCHHHHHHHHHhCCC---ChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCChHHHhhhhhhhhhcc
Q 010980 183 MDSNALRKRIFYGGV---DHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERKG 259 (496)
Q Consensus 183 ~~~~~Lr~~l~~~GI---P~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~~~~~~~~~~~~e~~~ 259 (496)
....+|++ +.+.|. .+.+|+.|+..|..-.|-..- ......|.++..+.-
T Consensus 30 telqelkq-larqgywaqshalrgkvyqrlirdipcrtv--------tpdasvysdivgkiv------------------ 82 (559)
T KOG2801|consen 30 TELQELKQ-LARQGYWAQSHALRGKVYQRLIRDIPCRTV--------TPDASVYSDIVGKIV------------------ 82 (559)
T ss_pred HhHHHHHH-HHhcchHHhhhhhhhHHHHHHHhcCCcccc--------CCchhHHHHHHHHHh------------------
Confidence 35678888 668886 578999999999887765421 112355766665421
Q ss_pred cccccccccCCCccccCCC-------CChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChHHHHHHHHHHHH
Q 010980 260 LIDKDVVRTDRSVTFFDGD-------DNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALME 332 (496)
Q Consensus 260 qI~kDV~RT~~~~~~F~~~-------~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~~aFw~f~~Lm~ 332 (496)
-+...-+.|-..+..+. +..+.-..++||.+.+...|++.+|..+..+++.++.+.-||+++|---+.++.
T Consensus 83 --gkhsssclplpefvdntqvpsyclnargegavrkilKOGanqfpdisfcpalpavvalllhysideaecfekacrila 160 (559)
T KOG2801|consen 83 --GKHSSSCLPLPEFVDNTQVPSYCLNARGEGAVRKILLCLANQFPDISFCPALPAVVALLLHYSIDEAECFEKACRILA 160 (559)
T ss_pred --ccCCcccccchhhcccCcCchhhhcCcCchhHHHHHHHHhccCCCcccCcchHHHHHHHHHhcccHHHHHHHhheeee
Confidence 11111111211111111 122446789999999999999999999999999999999899999987777765
Q ss_pred hcCC---CCCCCcchhhhHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHHHHHhhccch
Q 010980 333 RLGP---NFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSE 409 (496)
Q Consensus 333 ~~~~---~f~~~~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD~~l~~g~~~ 409 (496)
--.+ .....+-.+...+..|..|+.++....|+.+....-+.......|-..+| .++|+-...|++|+|+.+| .
T Consensus 161 cndpgrrlidqsflafesscmtfgdlvnkycqaahklmvavsedvlqvyadwqrwlf-gelplcyfarvfdvflveg--y 237 (559)
T KOG2801|consen 161 CNDPGRRLIDQSFLAFESSCMTFGDLVNKYCQAAHKLMVAVSEDVLQVYADWQRWLF-GELPLCYFARVFDVFLVEG--Y 237 (559)
T ss_pred ecCcchhhhhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh-ccchHHHHHHHhhheeecc--h
Confidence 3222 11222334555667888999998888877776655555555567776666 4699999999999999988 7
Q ss_pred hHHHHHHHHHHHHhHHHHhcC----CCCHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Q 010980 410 HLHLYVCVAILKRYRNKIMGE----QMDFDTLLKFINELSGRIDLDAILRDAEALCIC 463 (496)
Q Consensus 410 ~fl~~valAiL~~~r~~IL~~----~~d~~eil~~L~~lp~~iD~d~ll~~A~~L~~~ 463 (496)
+.++++++|||+...+.--.. +.--.+|..|++++......++++.+|.++...
T Consensus 238 kvlyrvalailkffhkvragqplesdsvkqdirtfvrdiaktvspekllekafairlf 295 (559)
T KOG2801|consen 238 KVLYRVALAILKFFHKVRAGQPLESDSVKQDIRTFVRDIAKTVSPEKLLEKAFAIRLF 295 (559)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCccchHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 899999999999988765433 222357888889998889999999999987543
No 21
>KOG1648 consensus Uncharacterized conserved protein, contains RUN, BRK and TBC domains [General function prediction only]
Probab=99.14 E-value=3.5e-12 Score=130.67 Aligned_cols=268 Identities=29% Similarity=0.505 Sum_probs=189.7
Q ss_pred CCCCHHHHHhchhccCCCCCHHHHHHHHHhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhcCC
Q 010980 165 PPLGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSIS 244 (496)
Q Consensus 165 ~~l~~~~W~~~l~~~~~~~~~~~Lr~~l~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~~~ 244 (496)
.-++++-|.++..+. ......-|+. ..++|+....|+.+|+.+.+.+...+...+.+.....-...|...+-.|
T Consensus 529 ~glt~~~W~qy~~d~-t~~e~~~l~~-~~~g~~e~~~r~~~~p~~~~~~~~g~~~~~~d~~e~~~s~~y~~~l~~~---- 602 (813)
T KOG1648|consen 529 AGLTEKFWKQYRADP-TIEEWRVLEA-EVRGRDEEAFRAARAPKAASPVREGSCDVFEDPNEPTCSQHYDRNLITL---- 602 (813)
T ss_pred ccccHHHHHHHhcCC-chHHHHHHHH-HHhcccHHHHhhcccccccccccccccchhcCCCccHHHHHHHHHHHHH----
Confidence 347889999886542 1222233443 5689999999999999999987655543322222223334455433322
Q ss_pred hHHHhhhhhhhhhcccccccccccCCCccccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChHHHH
Q 010980 245 PEQARRFTKFRERKGLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSF 324 (496)
Q Consensus 245 ~~~~~~~~~~~e~~~qI~kDV~RT~~~~~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~~aF 324 (496)
++-....|++|+.|..++..+|.+.++ .+. .++..+|...|-+-||.|||.|+.+|++..++||+.+-
T Consensus 603 ---------~~~~~~~~~kd~e~~~~~~~~fs~~~~--les-~~~~~~~~~~~l~~~~~~~~~dl~~p~~~~~ed~~~~~ 670 (813)
T KOG1648|consen 603 ---------FRANLHRIDKDVERCDRNLMFFSNKDN--LES-RRVMYTYVRRNLEEGYTQGMCDLLAPLLVTFEDEALTL 670 (813)
T ss_pred ---------HhhheeeecchhhhCcchheeecCCcc--hhh-heeeeeeeccccccccccchhhccCCcCCChhhccccc
Confidence 233456899999999999999988664 455 88999999999999999999999999999999988777
Q ss_pred HHHHHHHHhcCCCCCCCcchhhhHHHHHHHHHHHhChhhhhHHhhcCCC-cchhHHHHHHHhccccCchHHHHHHHHHHH
Q 010980 325 WCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCL-NYFFCFRWVLIQFKREFEYEKTMRLWEVLW 403 (496)
Q Consensus 325 w~f~~Lm~~~~~~f~~~~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~-~~~f~~~WfltlF~~~~p~~~vlRLWD~~l 403 (496)
-||.-+|-+-+..|.. .+|+...+-.+. +++..+| |.+ +++ .....|+||+.-|.+++..+....+|.++|
T Consensus 671 e~~s~~~~~q~~~~~q-~~~~~~~l~~~r-~~~v~~~-----l~s-~id~~qa~~f~~~~~~~~~~~s~~~~~~~~~~~~ 742 (813)
T KOG1648|consen 671 ECFSLLMLRQRGKFPQ-RPGMSKCLLNLR-LIQVVDP-----LIS-DIDYAQALSFRWFLLDFKRELSYECTYKVWEVIW 742 (813)
T ss_pred CCCcHHHHHhcccCCC-CCCccccccccc-chhhhcc-----hhc-chhhhhhcceeeeccCcccccCCCCcceeeEeec
Confidence 7887777654444432 345544433333 5555555 111 122 123459999999999999999999999998
Q ss_pred hhcc---chhHHHHHHHHHHHHhHHHHhcCCCCHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 010980 404 THYL---SEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFINELSGRIDLDAILRDAEA 459 (496)
Q Consensus 404 ~~g~---~~~fl~~valAiL~~~r~~IL~~~~d~~eil~~L~~lp~~iD~d~ll~~A~~ 459 (496)
.... ...|-+++++|. ..+-+.++..+.|..++++|++......|.+.++.-|..
T Consensus 743 ~~~~~~~~~~~~i~~g~~~-~~~~~~~~t~~~~~t~~i~~~~~~~e~~~c~r~~~~~~~ 800 (813)
T KOG1648|consen 743 AAQRLRITDDFAIFFGLAT-TNYHDVLITNNFDYTDMIKFFNEMAERHDCSRLLSSART 800 (813)
T ss_pred cccccccCcchhhhhhhHH-HhhHHHHhhcccchHHHHHHHHHHHhhhhhHHHHhcCcc
Confidence 7431 236888999998 666677777777888999999998877788877665543
No 22
>PF14961 BROMI: Broad-minded protein
Probab=97.12 E-value=0.0078 Score=69.42 Aligned_cols=171 Identities=18% Similarity=0.294 Sum_probs=117.9
Q ss_pred HHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcC-ChHHHHHHHHHHHHhcC------C--C---CCCC---cchhh--
Q 010980 284 HLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVME-DESQSFWCFVALMERLG------P--N---FNRD---QNGMH-- 346 (496)
Q Consensus 284 ~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~-dE~~aFw~f~~Lm~~~~------~--~---f~~~---~~gl~-- 346 (496)
+.-.+||..|..+.+.-+| .|....|+.+++++. |-+.+.-.+.+|-..+. + . +.+. ..|++
T Consensus 1084 ~s~l~~~~~~~~~~~~~~y-~g~DWFvstvfli~~Gd~e~~~~fL~~fS~ll~SaflW~pRlh~s~~l~~~~~~s~i~p~ 1162 (1296)
T PF14961_consen 1084 KSSLHILFEFIHFCLQGSY-PGHDWFVSTVFLIMLGDKERSLQFLQRFSRLLTSAFLWPPRLHASIHLPVDTAESGIHPV 1162 (1296)
T ss_pred cchhHHHhhhhcccCCCCC-CCchhHHHHHHHHHcCChhHhHHHHHHHHHHHHHhHhccccccccccCCchhhhcCCCch
Confidence 4445566666666665444 577877777777764 44445444443333221 1 1 1111 12332
Q ss_pred --hHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHHHHHhhccchhHHHHHHHHHHHHhH
Q 010980 347 --SQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYR 424 (496)
Q Consensus 347 --~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD~~l~~g~~~~fl~~valAiL~~~r 424 (496)
.....++.+++...|.+|.-|...|..+...|.+|+.-+|=..++|..++--.=+.+.-| .+|.+|+|+|+|+..+
T Consensus 1163 ~~~~~~~vE~ll~~E~P~V~saf~~sg~tpsqi~~rW~~QcFWnyldW~eI~~y~~~cil~G--~dyqvY~~VailkHlq 1240 (1296)
T PF14961_consen 1163 YFCSCHYVEMLLKAELPLVFSAFRMSGFTPSQICQRWLSQCFWNYLDWPEICHYIAICILYG--PDYQVYICVAILKHLQ 1240 (1296)
T ss_pred hhhHHHHHHHHHHhhccHHHHHHHHcCCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhcC--ccceeehhHHHHHHhh
Confidence 345789999999999999999999999999999999999999999888776666666556 5799999999999999
Q ss_pred HHHhcCCCCHHHHHHHHHhCCC-CCCHHHHHHHHH
Q 010980 425 NKIMGEQMDFDTLLKFINELSG-RIDLDAILRDAE 458 (496)
Q Consensus 425 ~~IL~~~~d~~eil~~L~~lp~-~iD~d~ll~~A~ 458 (496)
+.||... .-.++..|+++-+- -+.+.+-+.-.+
T Consensus 1241 ~~ilq~~-q~q~L~~flke~~l~gF~~~~~~~yM~ 1274 (1296)
T PF14961_consen 1241 PEILQHT-QTQDLQVFLKEEALRGFRVSDYLEYME 1274 (1296)
T ss_pred HHHHHhh-hhchHHHHhhhccccceeHHhHHHHHH
Confidence 9999774 55667888876552 244444333333
No 23
>KOG2197 consensus Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins [Signal transduction mechanisms]
Probab=96.82 E-value=0.0011 Score=71.54 Aligned_cols=82 Identities=37% Similarity=0.664 Sum_probs=70.8
Q ss_pred CCCCCCHHHHHhchhccCCCCCHHHHHHHHHhCCCChHHHHHHHHHHhCCCCCCCCHHHHHHHHHhcHHHHHHHHHHhhc
Q 010980 163 RQPPLGSEEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQS 242 (496)
Q Consensus 163 ~~~~l~~~~W~~~l~~~~~~~~~~~Lr~~l~~~GIP~~~R~~vW~~LLg~~~~~st~~er~~~~~~~~~~Y~~L~~~~~~ 242 (496)
+..+++.++|...++.+|...+..++-+++..+||++.+|+.+|.+|+|.|+.+++.+++..+....+..|..|..+...
T Consensus 44 ~~~~l~~~~~~~~f~~~~~~~~~~~~l~~i~~~gi~psir~evw~fll~~y~~~~~~~~~~~~r~~~~~~~~~l~~~c~~ 123 (488)
T KOG2197|consen 44 PGKTLKPEKWQANFDPDGRLSGFVKLLKLIILGGIDPSIRGEVWEFLLGCYDLDSTFEERNQLRVARRPQYNELLLVCQM 123 (488)
T ss_pred cccccchhhhhhccCCCccccchhhhheeeecCCCCCcccchhHHHHhcccCCCCchHHHHHHHhhcccchHHHHHHcch
Confidence 45556679999999999988766666566888999999999999999999999999999999999999999999887655
Q ss_pred CC
Q 010980 243 IS 244 (496)
Q Consensus 243 ~~ 244 (496)
+.
T Consensus 124 ~~ 125 (488)
T KOG2197|consen 124 MK 125 (488)
T ss_pred hh
Confidence 43
No 24
>KOG2224 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]
Probab=88.36 E-value=0.16 Score=52.71 Aligned_cols=34 Identities=59% Similarity=1.096 Sum_probs=31.6
Q ss_pred CCcccChhhhHHHHHHhcCChHHHHHHHHHHHHh
Q 010980 300 LGYCQGMSDLLSPILFVMEDESQSFWCFVALMER 333 (496)
Q Consensus 300 iGY~QGM~~Iaa~lL~v~~dE~~aFw~f~~Lm~~ 333 (496)
+|..|||++++||+|.-..||.++||||+.||.+
T Consensus 566 vglmqgmsdlvapilaevldesdtfwcfvglmqn 599 (781)
T KOG2224|consen 566 VGLMQGMSDLVAPILAEVLDESDTFWCFVGLMQN 599 (781)
T ss_pred hhhhccchhhhhhHHHhhhccccchhhhhhhhcc
Confidence 5888999999999998888999999999999984
No 25
>KOG1102 consensus Rab6 GTPase activator GAPCenA and related TBC domain proteins [General function prediction only]
Probab=63.06 E-value=1.9 Score=45.62 Aligned_cols=115 Identities=17% Similarity=0.154 Sum_probs=74.8
Q ss_pred cccccccccCCCccccCCCCChhHHHHHHHHHHHhhhcCCCCcccChhhhHHHHHHhcCChHHHHHHHHHHHHhcCCCCC
Q 010980 260 LIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESQSFWCFVALMERLGPNFN 339 (496)
Q Consensus 260 qI~kDV~RT~~~~~~F~~~~~~~~~~L~rIL~ays~~np~iGY~QGM~~Iaa~lL~v~~dE~~aFw~f~~Lm~~~~~~f~ 339 (496)
.|..|+..|+. |..+.+..++. |.+|..+++++||| +..+.+ .....+.
T Consensus 2 ~~~~~~~~~~~----~~~~~~~~~~~----l~~~~~~~~~~~~~--~~~~~~---------------------~~~~~~~ 50 (397)
T KOG1102|consen 2 EIDSPVRLTFR----LRPRYGQKQNN----LAAYEPYNPEVGYC--VLHITS---------------------KSDGFQS 50 (397)
T ss_pred CCCcccccccc----CCCCccccccc----ccCCCccccccccc--hhhhhh---------------------ccccccc
Confidence 46778888776 33333322222 88999999999999 555544 1111122
Q ss_pred CCcchhhhHHHHHHHHHHHhChhhhhHHhhcCCCcchhHHHHHHHhccccCchHHHHHHHHHHHhhc
Q 010980 340 RDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFCFRWVLIQFKREFEYEKTMRLWEVLWTHY 406 (496)
Q Consensus 340 ~~~~gl~~~l~~l~~LL~~~~P~L~~hL~~~~i~~~~f~~~WfltlF~~~~p~~~vlRLWD~~l~~g 406 (496)
.+...........+.......+.-..|+...+ ........|..-.|.....+..+.++||.+..++
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (397)
T KOG1102|consen 51 SNERKLTELRDSPESIPDLSQSKRPGHVDSSE-PTNELYPKSDERIFKDKPLLSLTLDLWDVKLLEG 116 (397)
T ss_pred CCcccccccccCcccccccccccccccccccc-cccccccccccccccccccccccchhHHHHhhhh
Confidence 22222221112233334455666777888888 7777888999999999999999999999998877
No 26
>PF08109 Antimicrobial14: Lactocin 705 family; InterPro: IPR012517 This family consists of lactocin 705 which is a bacteriocin produced by Lactobacillus casei CRL 705. Lactocin 705 is a class IIb bacteriocin, whose activity depends upon the complementation of two peptides (705-alpha and 705-beta) of 33 amino acid residues each. Lactocin 705 is active against several Gram-positive bacteria, including food-borne pathogens and is a good candidate to be used for biopreservation of fermented meats [].
Probab=30.75 E-value=34 Score=21.56 Aligned_cols=16 Identities=44% Similarity=0.746 Sum_probs=11.8
Q ss_pred CCcccChhhhHHHHHH
Q 010980 300 LGYCQGMSDLLSPILF 315 (496)
Q Consensus 300 iGY~QGM~~Iaa~lL~ 315 (496)
.||.||+.+.+.-.+.
T Consensus 3 sgyiqgipdflkgylh 18 (31)
T PF08109_consen 3 SGYIQGIPDFLKGYLH 18 (31)
T ss_pred cccccccHHHHHHHHh
Confidence 4899999987665443
No 27
>PF09597 IGR: IGR protein motif; InterPro: IPR019083 This entry is found in fungal and plant proteins and contains a conserved IGR motif. Its function is unknown.
Probab=27.79 E-value=88 Score=23.66 Aligned_cols=28 Identities=21% Similarity=0.531 Sum_probs=20.6
Q ss_pred HHHHhchhccCCCCCHHHHHHHHHhCCCChHHHHHHH
Q 010980 170 EEWTTFLDNEGRVMDSNALRKRIFYGGVDHKLRREVW 206 (496)
Q Consensus 170 ~~W~~~l~~~~~~~~~~~Lr~~l~~~GIP~~~R~~vW 206 (496)
++|++++. .+..+||+ .|||...|..+=
T Consensus 21 ~~w~~lf~-----~~s~~LK~----~GIp~r~RryiL 48 (57)
T PF09597_consen 21 SDWEKLFT-----TSSKQLKE----LGIPVRQRRYIL 48 (57)
T ss_pred HHHHHHHh-----cCHHHHHH----CCCCHHHHHHHH
Confidence 34888775 46677775 699999988764
No 28
>PF07644 PGAMP: Planctomycete PGAMP; InterPro: IPR011503 This conserved sequence is centred around an invariant motif of PGAMP in several short hypothetical proteins from the planctomycete Rhodopirellula baltica. The motif also occurs twice in Q7UVK9 from SWISSPROT.
Probab=20.12 E-value=34 Score=22.95 Aligned_cols=12 Identities=42% Similarity=0.684 Sum_probs=9.0
Q ss_pred cccCCccccccc
Q 010980 22 SLELPRAVSIAS 33 (496)
Q Consensus 22 ~~~~~~~~~~~~ 33 (496)
|+.+|+|+|.|+
T Consensus 1 s~rvPGAmplAs 12 (35)
T PF07644_consen 1 SVRVPGAMPLAS 12 (35)
T ss_pred CcccCccchHHH
Confidence 567888888665
Done!