Query 010981
Match_columns 496
No_of_seqs 282 out of 1676
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 18:19:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010981.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010981hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.8E-58 6.3E-63 472.6 31.4 350 61-441 7-400 (413)
2 3psg_A Pepsinogen; hydrolase(a 100.0 3.8E-59 1.3E-63 471.9 23.5 300 78-440 53-370 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 2.6E-59 8.7E-64 474.0 21.2 301 79-440 59-383 (383)
4 1tzs_A Cathepsin E; hydrolase, 100.0 4.5E-58 1.5E-62 461.9 28.4 310 79-448 21-350 (351)
5 3fv3_A SAPP1P-secreted asparti 100.0 8.5E-58 2.9E-62 458.2 29.3 300 82-449 13-338 (339)
6 1mpp_A Pepsin; hydrolase(acid 100.0 4.2E-57 1.4E-61 456.9 28.6 308 80-445 17-360 (361)
7 2qzx_A Candidapepsin-5; aspart 100.0 5.4E-57 1.9E-61 452.7 27.7 311 81-450 12-341 (342)
8 3pvk_A Candidapepsin-2; hydrol 100.0 7.1E-57 2.4E-61 452.1 27.8 312 81-450 12-341 (342)
9 1j71_A Candidapepsin, aspartic 100.0 5.3E-57 1.8E-61 451.2 26.5 304 81-449 12-333 (334)
10 1dpj_A Proteinase A; proteinas 100.0 7.2E-57 2.5E-61 449.4 27.3 295 81-440 13-329 (329)
11 3cms_A Chymosin B; hydrolase, 100.0 1.8E-57 6.3E-62 452.4 22.4 297 80-440 13-323 (323)
12 2apr_A Rhizopuspepsin; hydrola 100.0 1.9E-56 6.7E-61 445.2 28.7 298 80-440 14-324 (325)
13 4aa9_A Chymosin; hydrolase, as 100.0 5.1E-57 1.8E-61 448.9 23.8 298 79-440 9-320 (320)
14 1am5_A Pepsin, acid proteinase 100.0 1.3E-56 4.3E-61 446.6 25.0 296 80-440 11-324 (324)
15 1htr_B Gastricsin; aspartyl pr 100.0 1.8E-56 6E-61 446.6 24.9 301 78-440 9-329 (329)
16 3k1w_A Renin; protease, altern 100.0 9.5E-57 3.3E-61 451.0 22.6 301 80-441 17-341 (341)
17 3aup_A SBG7S, BG, basic 7S glo 100.0 4E-56 1.4E-60 455.7 27.6 345 63-443 10-396 (403)
18 3c9x_A Trichoderma reesei aspa 100.0 4.3E-56 1.5E-60 443.5 24.4 302 80-439 14-329 (329)
19 3qvc_A Histo-aspartic protease 100.0 1.9E-56 6.4E-61 460.9 21.6 297 78-440 134-449 (451)
20 1miq_A Plasmepsin; aspartic pr 100.0 3E-56 1E-60 451.5 22.6 297 78-440 59-374 (375)
21 1oew_A Endothiapepsin; hydrola 100.0 5.2E-56 1.8E-60 442.9 22.8 300 81-439 15-329 (329)
22 1qdm_A Prophytepsin; aspartic 100.0 1.4E-55 4.8E-60 458.4 22.7 313 78-439 49-477 (478)
23 1yg9_A Aspartic protease BLA G 100.0 3.9E-55 1.3E-59 436.6 23.0 295 80-440 16-329 (330)
24 1t6e_X Xylanase inhibitor; two 100.0 3.3E-54 1.1E-58 438.3 29.9 326 79-441 12-374 (381)
25 2bju_A Plasmepsin II; aspartic 100.0 2.4E-55 8.2E-60 451.9 19.9 297 79-440 136-450 (453)
26 2ewy_A Beta-secretase 2; BACE2 100.0 3.3E-54 1.1E-58 439.2 28.1 325 80-452 12-369 (383)
27 3lpj_A Beta-secretase 1; alzhe 100.0 8.1E-54 2.8E-58 445.2 28.7 319 80-445 73-425 (455)
28 2qp8_A Beta-secretase 1; BACE1 100.0 1.5E-53 5.1E-58 435.9 29.6 327 80-452 20-381 (395)
29 3vf3_A Beta-secretase 1; struc 100.0 2.4E-53 8.3E-58 435.4 30.6 317 81-444 28-378 (402)
30 1wkr_A Polyporopepsin; hydrola 100.0 8.1E-54 2.8E-58 429.3 25.0 290 82-444 13-337 (340)
31 1ibq_A Aspergillopepsin; aspar 100.0 2E-53 6.8E-58 423.5 25.3 298 81-440 14-325 (325)
32 1izd_A Aspartic proteinase; su 100.0 3E-53 1E-57 421.7 22.7 295 81-440 15-323 (323)
33 1bxo_A Protein (penicillopepsi 100.0 1.2E-53 3.9E-58 424.9 18.8 295 81-440 15-323 (323)
34 1b5f_A Protein (cardosin A); h 100.0 7.1E-42 2.4E-46 324.9 15.2 215 80-341 12-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 4.4E-38 1.5E-42 299.6 19.6 219 202-440 5-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 5.3E-22 1.8E-26 159.6 8.5 81 80-191 12-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 5.7E-18 1.9E-22 133.7 6.5 81 358-440 3-87 (87)
38 3s8i_A Protein DDI1 homolog 1; 89.0 0.36 1.2E-05 40.9 4.3 30 410-439 106-135 (148)
39 2hs1_A HIV-1 protease; ultra-h 85.7 1 3.6E-05 35.0 4.8 27 84-112 10-36 (99)
40 1fmb_A EIAV protease; hydrolas 83.3 1.1 3.9E-05 35.2 4.0 26 84-111 10-35 (104)
41 3ec0_A Protease; HIV-2, inhibi 81.5 1.9 6.6E-05 33.5 4.7 27 84-112 10-36 (99)
42 3liy_A Protease; hydrolase, hy 80.0 1.5 5.1E-05 34.9 3.6 31 84-114 12-45 (116)
43 2i1a_A DNA damage-inducible pr 76.4 2.1 7E-05 35.9 3.8 28 82-111 26-53 (148)
44 2hah_A Protease, retropepsin; 72.9 3.2 0.00011 33.3 3.8 26 84-112 16-41 (116)
45 3s8i_A Protein DDI1 homolog 1; 69.7 3.6 0.00012 34.6 3.7 29 82-112 24-52 (148)
46 3sqf_A Protease; folded monome 68.1 5.2 0.00018 31.9 4.0 28 84-113 11-38 (114)
47 2i1a_A DNA damage-inducible pr 56.7 9.9 0.00034 31.6 4.1 27 411-437 108-134 (148)
48 3slz_A GAG-Pro-POL polyprotein 56.0 14 0.00047 30.3 4.6 29 82-112 22-50 (132)
49 2rsp_A RSV protease; hydrolase 52.5 15 0.0005 29.8 4.1 23 89-113 27-49 (124)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 45.8 17 0.00059 32.1 3.9 27 83-111 9-35 (203)
51 3ka2_A [L-Ala51;Gly51']HIV-1 p 30.3 58 0.002 28.7 4.7 27 84-112 114-140 (203)
52 2k1k_A Ephrin type-A receptor 24.9 48 0.0017 20.6 2.3 19 465-483 6-24 (38)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.8e-58 Score=472.63 Aligned_cols=350 Identities=21% Similarity=0.361 Sum_probs=279.8
Q ss_pred CeeeeeccCCCCCcccCCcceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCce
Q 010981 61 GVVEFPVQGSSDPFLIGDSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARI 140 (496)
Q Consensus 61 ~~~~~~~~~~~~~~~~g~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~ 140 (496)
..+.+|+.+.. .+++|+++|.||||||+|.|+|||||+++||+|..| ..|+|++.
T Consensus 7 ~~~~~pv~~d~-------~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c------------------~~Sst~~~ 61 (413)
T 3vla_A 7 SALVVPVKKDA-------STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN------------------YVSSTYRP 61 (413)
T ss_dssp SEEEEEEEECT-------TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS------------------CCCTTCEE
T ss_pred ccEEEEeeecC-------CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC------------------CCCCCcCc
Confidence 35678887642 234999999999999999999999999999998764 25899999
Q ss_pred ecCCCccccCccCCCCCCCCC------CCCCCeeeeEe-CCCCeEEEEEEEEEEEEeeecCCccc-ccccccEEEeeeee
Q 010981 141 VSCSDPLCASEIQTTATQCPS------GSNQCSYSFEY-GDGSGTSGSYIYDTLYFDAILGESLI-ANSTALIVFGCSTY 212 (496)
Q Consensus 141 v~C~~~~C~~~~~~~~~~c~~------~~~~~~~~~~Y-~~g~~~~G~~~~D~v~i~~~~~~~~~-~~~~~~~~fG~~~~ 212 (496)
++|.++.|.....+.+..|.. .++.|.|.+.| ++|+.+.|++++|+|+|++..+.... ...+.++.|||+..
T Consensus 62 v~C~s~~C~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~ 141 (413)
T 3vla_A 62 VRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPT 141 (413)
T ss_dssp CBTTSHHHHHTTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECG
T ss_pred cCCCcccccccccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECccc
Confidence 999999998664433222221 24679999999 58888999999999999865443210 11356799999998
Q ss_pred ccCCCCCCCCCcceeeecCCCCCchHHHHHhcCCCCceeEEeecCCCCccceEEeCCCCC---------CC-eEEeeCCC
Q 010981 213 QTGDLSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHCLKGQGNGGGILVLGEILE---------PS-IVYSPLVP 282 (496)
Q Consensus 213 ~~~~~~~~~~~~~GIlGLg~~~~s~~~~l~~~g~i~~~FS~~l~~~~~~~G~l~~Gg~d~---------~~-l~~~pl~~ 282 (496)
+.+.. ....+|||||||++.++++.||.++++++++||+||.+....+|+|+||++|. ++ +.|+||+.
T Consensus 142 ~~~~g--~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~ 219 (413)
T 3vla_A 142 SLLQN--LASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLT 219 (413)
T ss_dssp GGGTT--SCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBC
T ss_pred ccccC--cccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeeccc
Confidence 63221 13578999999999999999999999888999999998656789999999873 45 99999986
Q ss_pred CC-------------CceeEEEeEEEEccEEeecCccccccc--CCCcEEEecccccccccHHHHHHHHHHHHHHhcc--
Q 010981 283 SK-------------PHYNLNLHGITVNGQLLSIDPSAFAAS--NNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQ-- 345 (496)
Q Consensus 283 ~~-------------~~w~v~l~~i~v~~~~~~~~~~~~~~~--~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~-- 345 (496)
++ .+|.|+|++|+||++.+.++.+.+... ....+||||||++++||+++|++|+++|.+++..
T Consensus 220 ~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~ 299 (413)
T 3vla_A 220 NPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARN 299 (413)
T ss_dssp CSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTT
T ss_pred CCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccC
Confidence 53 699999999999999998887766533 2468999999999999999999999999998751
Q ss_pred CcC-CCCCCCCceEEeeCCcc----ccCCeEEEEecC-CcEEEeCCCceEEEeeeeCCceEEEEEEEecC---CCceeeC
Q 010981 346 SVT-PTMSKGKQCYLVSNSVS----EIFPQVSLNFEG-GASMVLKPEEYLIHLGFYDGAAMWCIGFEKSP---GGVSILG 416 (496)
Q Consensus 346 ~~~-~~~~~~~~~y~~~c~~~----~~~P~i~f~f~g-g~~~~i~p~~y~~~~~~~~~~~~~cl~i~~~~---~~~~iLG 416 (496)
... ........||.+++... ..+|+|+|+|+| ++.|+|+|++|+++.. ++.+|++|...+ ...||||
T Consensus 300 ~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~----~~~~Cl~~~~~~~~~~~~~IlG 375 (413)
T 3vla_A 300 ITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIN----DNVVCLGVVDGGSNLRTSIVIG 375 (413)
T ss_dssp CCEECCCTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEE----TTEEEECEEEEESSCSSSEEEC
T ss_pred CCcCCCCCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeC----CCcEEEEEEecCCCcccceeEe
Confidence 111 11223568999887532 479999999965 4899999999999753 246788998764 2579999
Q ss_pred ceEEeeEEEEEECCCCEEEEEeCCC
Q 010981 417 DLVLKDKIFVYDLARQRVGWANYDC 441 (496)
Q Consensus 417 ~~fl~~~y~VfD~~~~~IGfa~~~c 441 (496)
+.|||++|+|||++++|||||++.+
T Consensus 376 d~fl~~~~vvfD~~~~riGfa~~~~ 400 (413)
T 3vla_A 376 GHQLEDNLVQFDLATSRVGFSGTLL 400 (413)
T ss_dssp HHHHTTEEEEEETTTTEEEEEEEGG
T ss_pred hhhhcCeEEEEECCCCEEEEEEecc
Confidence 9999999999999999999998754
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=3.8e-59 Score=471.85 Aligned_cols=300 Identities=29% Similarity=0.486 Sum_probs=255.2
Q ss_pred CcceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCC--CCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCC
Q 010981 78 DSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSN--CPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTT 155 (496)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~--C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~ 155 (496)
+.+..|+++|+||||||+|.|+|||||+++||+|..|.. |..+ +.|+|++|+|++.
T Consensus 53 ~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~-------~~y~~~~SsT~~~--------------- 110 (370)
T 3psg_A 53 YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDH-------NQFNPDDSSTFEA--------------- 110 (370)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTS-------CCBCGGGCTTCEE---------------
T ss_pred ccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCC-------CCCCCccCcCcEE---------------
Confidence 455699999999999999999999999999999999975 6655 8999999999975
Q ss_pred CCCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC
Q 010981 156 ATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL 235 (496)
Q Consensus 156 ~~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~ 235 (496)
..|.|.++|++|+ +.|.+++|+|+|++.. ..++.|||+....+.+ +....++||||||++..
T Consensus 111 --------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~~~Fg~a~~~~~~~-~~~~~~dGIlGLg~~~~ 172 (370)
T 3psg_A 111 --------TSQELSITYGTGS-MTGILGYDTVQVGGIS--------DTNQIFGLSETEPGSF-LYYAPFDGILGLAYPSI 172 (370)
T ss_dssp --------EEEEEEEESSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEECSCCCGG-GGGCSCSEEEECSCGGG
T ss_pred --------CCcEEEEEeCCce-EEEEEEEEEEeeCCcc--------cCCeEEEEEEeecccc-cccCCccceeccCCccc
Confidence 3579999999998 8999999999998653 5679999999887642 22456899999999765
Q ss_pred ------chHHHHHhcCCCC-ceeEEeecCCCCccceEEeCCCC----CCCeEEeeCCCCCCceeEEEeEEEEccEEeecC
Q 010981 236 ------SVISQLASRGITP-RVFSHCLKGQGNGGGILVLGEIL----EPSIVYSPLVPSKPHYNLNLHGITVNGQLLSID 304 (496)
Q Consensus 236 ------s~~~~l~~~g~i~-~~FS~~l~~~~~~~G~l~~Gg~d----~~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~~ 304 (496)
+++++|++||+|+ ++||+||.++...+|+|+|||+| ++++.|+|+. .+.+|.|++++|+|+++.+..
T Consensus 173 s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~-~~~~w~v~l~~i~v~g~~~~~- 250 (370)
T 3psg_A 173 SASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVS-VEGYWQITLDSITMDGETIAC- 250 (370)
T ss_dssp CGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECS-EETTEEEEECEEESSSSEEEC-
T ss_pred cccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccc-ccceeEEEEeEEEECCEEEec-
Confidence 4789999999996 89999999876668999999999 4799999998 568999999999999977642
Q ss_pred cccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEeC
Q 010981 305 PSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLK 384 (496)
Q Consensus 305 ~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i~ 384 (496)
..+..+||||||+++++|++++++|.+++++.. ...++|.++|+....+|+|+|+| +|.+++|+
T Consensus 251 ------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~---------~~~g~~~v~C~~~~~lP~i~f~~-~g~~~~l~ 314 (370)
T 3psg_A 251 ------SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE---------NSDGEMVISCSSIDSLPDIVFTI-DGVQYPLS 314 (370)
T ss_dssp ------TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE---------CTTCCEECCGGGGGGCCCEEEEE-TTEEEEEC
T ss_pred ------CCCceEEEcCCCCcEECCHHHHHHHHHHhCCcc---------cCCCcEEEECCCcccCCcEEEEE-CCEEEEEC
Confidence 245689999999999999999999999986542 23457999999888999999999 89999999
Q ss_pred CCceEEEeeeeCCceEEEEEEEecC-----CCceeeCceEEeeEEEEEECCCCEEEEEeCC
Q 010981 385 PEEYLIHLGFYDGAAMWCIGFEKSP-----GGVSILGDLVLKDKIFVYDLARQRVGWANYD 440 (496)
Q Consensus 385 p~~y~~~~~~~~~~~~~cl~i~~~~-----~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~ 440 (496)
+++|+++. ++.|.++|+..+ +..||||++|||++|+|||++++|||||+++
T Consensus 315 ~~~yi~~~-----~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 315 PSAYILQD-----DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp HHHHEEEC-----SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHHhcccC-----CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 99999981 345777888753 2359999999999999999999999999974
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=2.6e-59 Score=474.01 Aligned_cols=301 Identities=23% Similarity=0.425 Sum_probs=255.7
Q ss_pred cceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCC----CCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCC
Q 010981 79 SYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCS----NCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQT 154 (496)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~----~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~ 154 (496)
.+..|+++|+||||||+|.|+|||||+++||+|..|. .|..+ +.|||++|+|++.
T Consensus 59 ~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~-------~~y~~~~SsT~~~-------------- 117 (383)
T 2x0b_A 59 MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH-------KLFDASDSSSYKH-------------- 117 (383)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTS-------CCBCGGGCTTCEE--------------
T ss_pred CCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCC-------CCCCCCCCCcEEE--------------
Confidence 3459999999999999999999999999999999996 58766 7999999999974
Q ss_pred CCCCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCC
Q 010981 155 TATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGD 234 (496)
Q Consensus 155 ~~~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~ 234 (496)
.+|.|.++|++|+ ++|.+++|+|+|++.. +. +.|||+..+.+.. +....+|||||||++.
T Consensus 118 ---------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~g~~-f~~~~~dGIlGLg~~~ 177 (383)
T 2x0b_A 118 ---------NGTELTLRYSTGT-VSGFLSQDIITVGGIT--------VT-QMFGEVTEMPALP-FMLAEFDGVVGMGFIE 177 (383)
T ss_dssp ---------EEEEEEEECSSCE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECCHHH-HTTCSSSEEEECSCGG
T ss_pred ---------CCcEEEEEcCCcc-EEEEEEeeEEEEcCce--------EE-EEEEEEEecCCcc-cccCCCceEeccCCCc
Confidence 4589999999998 8999999999998643 55 9999999876531 1245789999999986
Q ss_pred Cc------hHHHHHhcCCCC-ceeEEeecCCCCc----cceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccE
Q 010981 235 LS------VISQLASRGITP-RVFSHCLKGQGNG----GGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQ 299 (496)
Q Consensus 235 ~s------~~~~l~~~g~i~-~~FS~~l~~~~~~----~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~ 299 (496)
.+ ++++|++||+|+ ++||+||+++... +|+|+|||+|+ +++.|+|+. .+.+|.|+|++|+|+++
T Consensus 178 ~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~-~~~~w~v~l~~i~v~~~ 256 (383)
T 2x0b_A 178 QAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSVGSS 256 (383)
T ss_dssp GCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS-STTSCEEEECEEEESSC
T ss_pred cccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC-CCceEEEEEeEEEeCCc
Confidence 54 789999999996 9999999986433 89999999994 689999998 56899999999999987
Q ss_pred EeecCcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCc
Q 010981 300 LLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGA 379 (496)
Q Consensus 300 ~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~ 379 (496)
.+. ...+..+|+||||+++++|++++++|.+++++.. ..+.|.++|+....+|+|+|+| +|.
T Consensus 257 ~~~-------~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~----------~~g~~~v~C~~~~~~P~i~f~~-~g~ 318 (383)
T 2x0b_A 257 TLL-------CEDGCLALVDTGASYISGSTSSIEKLMEALGAKK----------RLFDYVVKCNEGPTLPDISFHL-GGK 318 (383)
T ss_dssp CCB-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE----------CSSCEEEEGGGTTTCCCEEEEE-TTE
T ss_pred eEE-------cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc----------cCCcEEEeccccccCceEEEEE-CCE
Confidence 642 1345689999999999999999999999987542 2234889999888899999999 889
Q ss_pred EEEeCCCceEEEeeeeCCceEEEEEEEecC-----CCceeeCceEEeeEEEEEECCCCEEEEEeCC
Q 010981 380 SMVLKPEEYLIHLGFYDGAAMWCIGFEKSP-----GGVSILGDLVLKDKIFVYDLARQRVGWANYD 440 (496)
Q Consensus 380 ~~~i~p~~y~~~~~~~~~~~~~cl~i~~~~-----~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~ 440 (496)
+++|+|++|+++... .+...|.++|+..+ ...||||++|||++|+|||++++|||||+++
T Consensus 319 ~~~l~~~~yi~~~~~-~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 319 EYTLTSADYVFQESY-SSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp EEEECHHHHBCCCCC-CTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEECHHHhEeeccC-CCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 999999999987532 22446767898753 4679999999999999999999999999874
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.5e-58 Score=461.85 Aligned_cols=310 Identities=28% Similarity=0.457 Sum_probs=255.0
Q ss_pred cceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCC--CCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCC
Q 010981 79 SYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCS--NCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTA 156 (496)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~--~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~ 156 (496)
.+..|+++|+||||+|+|.|+|||||+++||+|..|. .|..+ +.|||++|+|++
T Consensus 21 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~----------------- 76 (351)
T 1tzs_A 21 LDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTH-------SRFQPSQSSTYS----------------- 76 (351)
T ss_dssp SSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTS-------CCBCGGGCTTCB-----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCC-------CcCCcccCcceE-----------------
Confidence 3459999999999999999999999999999999997 68765 899999999996
Q ss_pred CCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCCc
Q 010981 157 TQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLS 236 (496)
Q Consensus 157 ~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~s 236 (496)
...|.|.+.|++|+ +.|.+++|+|+|++.. ..++.|||+....+... ....++||||||++..+
T Consensus 77 ------~~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s 140 (351)
T 1tzs_A 77 ------QPGQSFSIQYGTGS-LSGIIGADQVSVEGLT--------VVGQQFGESVTEPGQTF-VDAEFDGILGLGYPSLA 140 (351)
T ss_dssp ------CCSCEEEEESSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEECSCCCGGG-GGCSCSEEEECSCGGGS
T ss_pred ------ECCCEEEEEeCCCC-eEEEEEEeEEEECCeE--------ECCeEEEEEEecccccc-ccCCCceEEecCCcccc
Confidence 35689999999998 7999999999998643 56799999998766421 23567999999998654
Q ss_pred ------hHHHHHhcCCCC-ceeEEeecCCCCc--cceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEEeec
Q 010981 237 ------VISQLASRGITP-RVFSHCLKGQGNG--GGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQLLSI 303 (496)
Q Consensus 237 ------~~~~l~~~g~i~-~~FS~~l~~~~~~--~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~ 303 (496)
++++|++||+|+ ++||+||++.... +|.|+||++|+ +++.|+|+. ...+|.|++++|+|+++.+..
T Consensus 141 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 219 (351)
T 1tzs_A 141 VGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVT-KQAYWQIALDNIQVGGTVMFC 219 (351)
T ss_dssp GGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECS-EETTEEEEEEEEEETTEEEEC
T ss_pred ccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecC-CCceEEEEeCEEEECCceEEc
Confidence 889999999996 8999999986443 89999999993 789999998 468999999999999987531
Q ss_pred CcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEe
Q 010981 304 DPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVL 383 (496)
Q Consensus 304 ~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i 383 (496)
..+..+||||||+++++|++++++|.+++.+.. .. +.|.++|.....+|+|+|+| +|.+++|
T Consensus 220 -------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~--------~~--g~~~~~C~~~~~~P~i~f~f-~g~~~~i 281 (351)
T 1tzs_A 220 -------SEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAP--------VD--GEYAVECANLNVMPDVTFTI-NGVPYTL 281 (351)
T ss_dssp -------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE--------CS--SSEEECGGGGGGSCCEEEEE-TTEEEEE
T ss_pred -------CCCceEEeccCCcceeCCHHHHHHHHHHhCCcc--------cC--CeEEEeCCCCccCCcEEEEE-CCEEEEE
Confidence 235679999999999999999999999986542 11 45889999878899999999 8899999
Q ss_pred CCCceEEEeeeeCCceEEEEEEEecC-----CCceeeCceEEeeEEEEEECCCCEEEEEeCCCCCCccee
Q 010981 384 KPEEYLIHLGFYDGAAMWCIGFEKSP-----GGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLSVNVS 448 (496)
Q Consensus 384 ~p~~y~~~~~~~~~~~~~cl~i~~~~-----~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~c~~~~~~~ 448 (496)
+|++|+++... .+...|.++|+..+ ...||||++|||++|+|||++++|||||+++|....++|
T Consensus 282 ~~~~yi~~~~~-~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~~~~~ 350 (351)
T 1tzs_A 282 SPTAYTLLDFV-DGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSHPQFE 350 (351)
T ss_dssp CTTTSEECC------CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC--------
T ss_pred CHHHhEeeccC-CCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccchhhc
Confidence 99999987532 22346777898753 467999999999999999999999999999998766664
No 5
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=8.5e-58 Score=458.20 Aligned_cols=300 Identities=24% Similarity=0.413 Sum_probs=259.6
Q ss_pred eEEEEEEeCCCCcEEEEEEEcCCCeeEEe-----CCCCCCCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCC
Q 010981 82 LYFTKVKLGSPPKEFNVQIDTGSDILWVT-----CSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTA 156 (496)
Q Consensus 82 ~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~-----~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~ 156 (496)
.|+++|+||||||++.|+|||||+++||+ |..|..|..+ +.|+|++|+|++..
T Consensus 13 ~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~-------~~y~~~~SsT~~~~--------------- 70 (339)
T 3fv3_A 13 SYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSS-------GTFTPSSSSSYKNL--------------- 70 (339)
T ss_dssp SEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTT-------CCBCGGGCTTCEEE---------------
T ss_pred EEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCC-------CcCCCccCcceeeC---------------
Confidence 99999999999999999999999999998 5555677765 89999999999754
Q ss_pred CCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCCc
Q 010981 157 TQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLS 236 (496)
Q Consensus 157 ~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~s 236 (496)
.|.|.+.|++|+.+.|.+++|+|+|++.. ..++.|||+....+ .+||||||++..+
T Consensus 71 --------~~~~~i~Yg~gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~--------~~GilGLg~~~~~ 126 (339)
T 3fv3_A 71 --------GAAFTIRYGDGSTSQGTWGKDTVTINGVS--------ITGQQIADVTQTSV--------DQGILGIGYTSNE 126 (339)
T ss_dssp --------EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEESS--------SSCEEECSCGGGC
T ss_pred --------CceEEEEECCCceEEEEEEEEEEEECCEE--------ECceEEEEEEecCC--------CceeEEecCcccc
Confidence 47999999999889999999999998653 56799999998754 4899999997643
Q ss_pred ----------------hHHHHHhcCCCC-ceeEEeecCCCCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEE
Q 010981 237 ----------------VISQLASRGITP-RVFSHCLKGQGNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGIT 295 (496)
Q Consensus 237 ----------------~~~~l~~~g~i~-~~FS~~l~~~~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~ 295 (496)
++++|++||+|+ ++||+||.+.+...|.|+|||+|+ +++.|+|+. ...+|.|++++|.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~ 205 (339)
T 3fv3_A 127 AVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVT-SSQALTISLASVN 205 (339)
T ss_dssp CCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBC-CSSSCEEEEEEEE
T ss_pred ccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecc-cCccEEEEEEEEE
Confidence 899999999997 899999998766789999999984 789999998 4569999999999
Q ss_pred EccEEeecCcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEe
Q 010981 296 VNGQLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNF 375 (496)
Q Consensus 296 v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f 375 (496)
|+++.+.. ...++|||||++++||++++++|++++.+..... ....+.|.++|.. ..+|+|+|+|
T Consensus 206 v~g~~~~~---------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~C~~-~~~p~i~f~f 270 (339)
T 3fv3_A 206 LKGSSFSF---------GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQV-----ARDQYLYFIDCNT-DTSGTTVFNF 270 (339)
T ss_dssp ESSCEEEE---------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE-----ETTEEEEEECTTC-CCCSEEEEEE
T ss_pred ECCEeecC---------CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc-----cccCceEEEecCC-CCCCcEEEEE
Confidence 99987753 2469999999999999999999999998654210 0134568899986 4689999999
Q ss_pred cCCcEEEeCCCceEEEeeeeCCceEEEEEEEecCCCceeeCceEEeeEEEEEECCCCEEEEEeCCCCCCcceee
Q 010981 376 EGGASMVLKPEEYLIHLGFYDGAAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLSVNVSI 449 (496)
Q Consensus 376 ~gg~~~~i~p~~y~~~~~~~~~~~~~cl~i~~~~~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~c~~~~~~~~ 449 (496)
.+|.+++|++++|+++. +++.|+++|++ .+.||||++|||++|+|||++++|||||+++|+++.++++
T Consensus 271 ~~g~~~~v~~~~~~~~~----~~~~C~~~i~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~i~~ 338 (339)
T 3fv3_A 271 GNGAKITVPNTEYVYQN----GDGTCLWGIQP--SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTTDSSISA 338 (339)
T ss_dssp TTSCEEEEEGGGGEEEC----SSSCEEESEEE--CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEE
T ss_pred CCCCEEEECHHHheeeC----CCCeEEEEEEe--CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCCccceEE
Confidence 66899999999999874 34578899998 3579999999999999999999999999999998888765
No 6
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=4.2e-57 Score=456.85 Aligned_cols=308 Identities=24% Similarity=0.399 Sum_probs=261.6
Q ss_pred ceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCC---CCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCC
Q 010981 80 YWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCS---NCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTA 156 (496)
Q Consensus 80 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~---~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~ 156 (496)
+..|+++|+||||+|++.|+|||||+++||+|..|. .|..+ +.|+|++|+|++..
T Consensus 17 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~-------~~y~~~~SsT~~~~--------------- 74 (361)
T 1mpp_A 17 LEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGK-------RFFDPSSSSTFKET--------------- 74 (361)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSS-------CCBCGGGCTTCEEE---------------
T ss_pred CCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCC-------CcCCCccCCceEec---------------
Confidence 349999999999999999999999999999999998 78776 79999999999753
Q ss_pred CCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccC-----CCCCCCCCcceeeecC
Q 010981 157 TQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTG-----DLSKTDKAIDGIFGFG 231 (496)
Q Consensus 157 ~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~-----~~~~~~~~~~GIlGLg 231 (496)
.|.|.+.|++|+ +.|.+++|+|+|++.. +.++.|||+....+ .+ +.....+||||||
T Consensus 75 --------~~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~~~~~~-~~~~~~~GilGLg 136 (361)
T 1mpp_A 75 --------DYNLNITYGTGG-ANGIYFRDSITVGGAT--------VKQQTLAYVDNVSGPTAEQSP-DSELFLDGIFGAA 136 (361)
T ss_dssp --------EEEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEEESGGGSSCT-TCSSCCCEEEECS
T ss_pred --------CCeEEEEECCce-EEEEEEEEEEEECCEE--------EeceEEEEEEeccCccccccc-cccCCCCCEEEeC
Confidence 479999999999 8999999999998643 56799999999876 32 2245789999999
Q ss_pred CCCC------------chHHHHHhcCCCC-ceeEEeecCCCCccceEEeCCCCC----CCeEEeeCCCCCC---ceeEEE
Q 010981 232 QGDL------------SVISQLASRGITP-RVFSHCLKGQGNGGGILVLGEILE----PSIVYSPLVPSKP---HYNLNL 291 (496)
Q Consensus 232 ~~~~------------s~~~~l~~~g~i~-~~FS~~l~~~~~~~G~l~~Gg~d~----~~l~~~pl~~~~~---~w~v~l 291 (496)
++.. +++++|++||+|+ ++||+||.+. ...|.|+||++|+ +++.|+|+....+ +|.|+|
T Consensus 137 ~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l 215 (361)
T 1mpp_A 137 YPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN-DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPV 215 (361)
T ss_dssp CGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS-SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEE
T ss_pred CcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC-CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEE
Confidence 9743 4778999999996 8999999986 5689999999983 7899999985544 899999
Q ss_pred eEEEEccEEeecCcccccccCCCcEE-EecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccC-C
Q 010981 292 HGITVNGQLLSIDPSAFAASNNRETI-VDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIF-P 369 (496)
Q Consensus 292 ~~i~v~~~~~~~~~~~~~~~~~~~~i-iDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~-P 369 (496)
++|+|+++.+... .+..+| |||||++++||++++++|++++.+... ...+.|.++|.....+ |
T Consensus 216 ~~i~v~~~~~~~~-------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~--------~~~g~~~~~C~~~~~~~p 280 (361)
T 1mpp_A 216 TGVKIDGSDAVSF-------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT--------ESQQGYTVPCSKYQDSKT 280 (361)
T ss_dssp EEEEETTEEEEEE-------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE--------EETTEEEEEHHHHTTCCC
T ss_pred eEEEECCeeeccC-------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc--------CCCCcEEEECCCcccCCC
Confidence 9999999876421 235799 999999999999999999999876532 2345688999877777 9
Q ss_pred eEEEEec-C-----CcEEEeCCCceEEEeeeeCCceEEEEEEEecCCCceeeCceEEeeEEEEEECCCCEEEEEeCCCCC
Q 010981 370 QVSLNFE-G-----GASMVLKPEEYLIHLGFYDGAAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSL 443 (496)
Q Consensus 370 ~i~f~f~-g-----g~~~~i~p~~y~~~~~~~~~~~~~cl~i~~~~~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~c~~ 443 (496)
+|+|+|. + |.+++|+|++|+++.. .+...|.++|++.....||||++|||++|+|||++++|||||+++|..
T Consensus 281 ~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~--~~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~ 358 (361)
T 1mpp_A 281 TFSLVLQKSGSSSDTIDVSVPISKMLLPVD--KSGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGY 358 (361)
T ss_dssp EEEEEEECTTCSSCEEEEEEEGGGGEEECS--SSSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTT
T ss_pred cEEEEEEcCCcCCCCeEEEECHHHhEEecC--CCCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCC
Confidence 9999993 4 7899999999999753 134467779988645689999999999999999999999999999986
Q ss_pred Cc
Q 010981 444 SV 445 (496)
Q Consensus 444 ~~ 445 (496)
+.
T Consensus 359 ~~ 360 (361)
T 1mpp_A 359 EN 360 (361)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 7
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=5.4e-57 Score=452.67 Aligned_cols=311 Identities=23% Similarity=0.370 Sum_probs=258.5
Q ss_pred eeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCC--CCCCCCC--CCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCC
Q 010981 81 WLYFTKVKLGSPPKEFNVQIDTGSDILWVTCS--SCSNCPQ--NSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTA 156 (496)
Q Consensus 81 ~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~--~C~~C~~--~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~ 156 (496)
..|+++|+||||+|+|.|+|||||+++||++. .|..|.. ....|..++.|||++|+|++..
T Consensus 12 ~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~--------------- 76 (342)
T 2qzx_A 12 ITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNL--------------- 76 (342)
T ss_dssp SCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEE---------------
T ss_pred eEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccC---------------
Confidence 39999999999999999999999999999866 6764421 1122333589999999999753
Q ss_pred CCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC-
Q 010981 157 TQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL- 235 (496)
Q Consensus 157 ~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~- 235 (496)
.|.|.+.|++|+.+.|.+++|+|+|++.. ..++.|||+.... ..+||||||++..
T Consensus 77 --------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~--------~~~GilGLg~~~~~ 132 (342)
T 2qzx_A 77 --------NTRFDIKYGDGSYAKGKLYKDTVGIGGVS--------VRDQLFANVWSTS--------ARKGILGIGFQSGE 132 (342)
T ss_dssp --------EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEEC--------SSSCEEECSCGGGC
T ss_pred --------CCcEEEEeCCCCeEEEEEEEEEEEECCEE--------ecceEEEEEEecC--------CCcCEEEEcccccc
Confidence 47999999999988999999999998643 5679999999763 4589999999754
Q ss_pred -------chHHHHHhcCCCC-ceeEEeecCCCCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEEeec
Q 010981 236 -------SVISQLASRGITP-RVFSHCLKGQGNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQLLSI 303 (496)
Q Consensus 236 -------s~~~~l~~~g~i~-~~FS~~l~~~~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~ 303 (496)
+++.+|++||+|+ ++||+||++....+|.|+||++|+ +++.|+|+. ...+|.|++++|+|+++.+..
T Consensus 133 ~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~~~ 211 (342)
T 2qzx_A 133 ATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPIT-SEKKLTVGLRSVNVRGRNVDA 211 (342)
T ss_dssp SSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEEEE
T ss_pred CCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEecc-CCceEEEEEeEEEECCEecCC
Confidence 7899999999996 899999998656789999999984 689999998 456999999999999988743
Q ss_pred CcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEe
Q 010981 304 DPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVL 383 (496)
Q Consensus 304 ~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i 383 (496)
+..+||||||++++||++++++|++++.+..... ......|.++|+. +|+|+|+|.+|.+++|
T Consensus 212 ---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~C~~---~p~i~f~f~~g~~~~i 274 (342)
T 2qzx_A 212 ---------NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFD-----SAGNKVYVADCKT---SGTIDFQFGNNLKISV 274 (342)
T ss_dssp ---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEEC-----TTSCEEEEECTTC---CCEEEEEETTTEEEEE
T ss_pred ---------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeec-----cCCCcEEEEECCC---CCcEEEEECCCcEEEE
Confidence 2469999999999999999999999998764311 1123478999963 7999999977899999
Q ss_pred CCCceEEEeeee--CCceEEEEEEEecCCCceeeCceEEeeEEEEEECCCCEEEEEeCCCCCCcceeec
Q 010981 384 KPEEYLIHLGFY--DGAAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLSVNVSIT 450 (496)
Q Consensus 384 ~p~~y~~~~~~~--~~~~~~cl~i~~~~~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~c~~~~~~~~~ 450 (496)
++++|+++.... ++...|.++|+.. ..||||++|||++|+|||++++|||||+++|..+.+|+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~~i 341 (342)
T 2qzx_A 275 PVSEFLFQTYYTSGKPFPKCEVRIRES--EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTSESDIVAI 341 (342)
T ss_dssp EGGGGEECCBCTTSCBCSSEEESEEEC--SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEEC
T ss_pred cHHHhcccccccCCCCCCccEEEEecC--CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCCCCCeEEc
Confidence 999999874211 1234577778775 4699999999999999999999999999999988888765
No 8
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=7.1e-57 Score=452.09 Aligned_cols=312 Identities=26% Similarity=0.430 Sum_probs=258.0
Q ss_pred eeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCC--CCCCCCC--CCCCCCCCCCCCCCCCcCceecCCCccccCccCCCC
Q 010981 81 WLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSS--CSNCPQN--SGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTA 156 (496)
Q Consensus 81 ~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~--C~~C~~~--~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~ 156 (496)
..|+++|+||||||++.|++||||+++||++.. |..|... ...|...+.|+|++|+|++..
T Consensus 12 ~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~--------------- 76 (342)
T 3pvk_A 12 VTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDL--------------- 76 (342)
T ss_dssp SSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEE---------------
T ss_pred cEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeec---------------
Confidence 399999999999999999999999999998764 6544221 112223489999999999754
Q ss_pred CCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCC--
Q 010981 157 TQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGD-- 234 (496)
Q Consensus 157 ~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~-- 234 (496)
.|.|.+.|++|+.+.|.+++|+|+|++.. ..++.|||+.... ..+||||||++.
T Consensus 77 --------~~~~~i~Yg~gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~--------~~~GilGLg~~~~~ 132 (342)
T 3pvk_A 77 --------NTPFKIGYGDGSSSQGTLYKDTVGFGGVS--------IKNQVLADVDSTS--------IDQGILGVGYKTNE 132 (342)
T ss_dssp --------EEEEEEECSSSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEES--------SSSCEEECSCGGGC
T ss_pred --------CCeEEEEecCCCeEEEEEEEEEEEECCEE--------ecceEEEEEEccC--------CCccEEEecCcccc
Confidence 47999999999989999999999998653 5679999998764 358999999986
Q ss_pred -----CchHHHHHhcCCCC-ceeEEeecCCCCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEEeecC
Q 010981 235 -----LSVISQLASRGITP-RVFSHCLKGQGNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQLLSID 304 (496)
Q Consensus 235 -----~s~~~~l~~~g~i~-~~FS~~l~~~~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~~ 304 (496)
.+++.+|++||+|+ ++||+||.+.+...|.|+|||+|+ +++.|+|+. ...+|.|++++|.|+++.+..+
T Consensus 133 ~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~~~~ 211 (342)
T 3pvk_A 133 AGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVT-SDRELRISLGSVEVSGKTINTD 211 (342)
T ss_dssp SSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEEEEE
T ss_pred ccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecC-ccceEEEEEeEEEECCEEecCC
Confidence 46999999999997 899999988766789999999984 689999998 4569999999999999987532
Q ss_pred cccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEeC
Q 010981 305 PSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLK 384 (496)
Q Consensus 305 ~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i~ 384 (496)
+..++|||||++++||++++++|.+++.+..... ..+..+|.++|+. .|+|+|+|++|.+++|+
T Consensus 212 --------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~C~~---~p~i~f~f~~g~~~~vp 275 (342)
T 3pvk_A 212 --------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQD-----SNGNSFYEVDCNL---SGDVVFNFSKNAKISVP 275 (342)
T ss_dssp --------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEEC-----TTSCEEEEECSCC---CSEEEEEESTTCEEEEE
T ss_pred --------CceEEEeCCCCCeecCHHHHHHHHHHcCCeeccc-----CCCceEEEEecCC---CCceEEEECCCCEEEEc
Confidence 2569999999999999999999999997764321 1234579999973 59999999668999999
Q ss_pred CCceEEEeeeeCC--ceEEEEEEEecCCCceeeCceEEeeEEEEEECCCCEEEEEeCCCCCCcceeec
Q 010981 385 PEEYLIHLGFYDG--AAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLSVNVSIT 450 (496)
Q Consensus 385 p~~y~~~~~~~~~--~~~~cl~i~~~~~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~c~~~~~~~~~ 450 (496)
+++|+++....++ ...|.++|+.. +.||||++|||++|+|||++++|||||+++|+++.++.+.
T Consensus 276 ~~~~~~~~~~~~g~~~~~C~~~i~~~--~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~iv~i 341 (342)
T 3pvk_A 276 ASEFAASLQGDDGQPYDKCQLLFDVN--DANILGDNFLRSAYIVYDLDDNEISLAQVKYTSASSISAL 341 (342)
T ss_dssp GGGGEEC----------CEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEEC
T ss_pred HHHheeeccccCCCcCCeeEEEEeeC--CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCCCCEEEe
Confidence 9999987432122 25677888874 6799999999999999999999999999999988887754
No 9
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=5.3e-57 Score=451.16 Aligned_cols=304 Identities=27% Similarity=0.422 Sum_probs=255.9
Q ss_pred eeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCC--CCCCCCC--CCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCC
Q 010981 81 WLYFTKVKLGSPPKEFNVQIDTGSDILWVTCS--SCSNCPQ--NSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTA 156 (496)
Q Consensus 81 ~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~--~C~~C~~--~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~ 156 (496)
..|+++|+||||+|+|.|+|||||+++||+|. .|..|.. ....|..++.|||++|+|++..
T Consensus 12 ~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~--------------- 76 (334)
T 1j71_A 12 PSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNL--------------- 76 (334)
T ss_dssp SSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEE---------------
T ss_pred cEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccC---------------
Confidence 39999999999999999999999999999976 6764421 0112233489999999999753
Q ss_pred CCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC-
Q 010981 157 TQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL- 235 (496)
Q Consensus 157 ~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~- 235 (496)
.|.|.++|++|+.++|.+++|+|+|++.. ..++.|||+.... ..+||||||++..
T Consensus 77 --------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~--------~~~GilGLg~~~~~ 132 (334)
T 1j71_A 77 --------NQDFSIEYGDLTSSQGSFYKDTVGFGGIS--------IKNQQFADVTTTS--------VDQGIMGIGFTADE 132 (334)
T ss_dssp --------EEEEEEEBTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEES--------SSSCEEECSCGGGS
T ss_pred --------CCceEEEECCCCEEEEEEEEEEEEECCEE--------EccEEEEEEEecC--------CCccEEEEcCCccc
Confidence 57999999999988999999999998643 5679999998763 4589999999764
Q ss_pred -------chHHHHHhcCCCC-ceeEEeecCCCCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEEeec
Q 010981 236 -------SVISQLASRGITP-RVFSHCLKGQGNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQLLSI 303 (496)
Q Consensus 236 -------s~~~~l~~~g~i~-~~FS~~l~~~~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~ 303 (496)
+++++|++||+|+ ++||+||++.....|.|+||++|+ +++.|+|+. ...+|.|++++|+|+++.+..
T Consensus 133 ~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~~~ 211 (334)
T 1j71_A 133 AGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVT-SSVELRVHLGSINFDGTSVST 211 (334)
T ss_dssp STTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECC-CSSSCEEEEEEEEETTEEEEE
T ss_pred CccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEcc-CCCeEEEEEeEEEECCEeccC
Confidence 7899999999996 899999998656789999999985 579999998 456999999999999988743
Q ss_pred CcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEE-eeCCccccCCeEEEEecCCcEEE
Q 010981 304 DPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYL-VSNSVSEIFPQVSLNFEGGASMV 382 (496)
Q Consensus 304 ~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~-~~c~~~~~~P~i~f~f~gg~~~~ 382 (496)
+..+||||||++++||++++++|++++.+... .....|. ++|+. +|+|+|+|.+|.+++
T Consensus 212 ---------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~--------~~~~~~~~~~C~~---~p~i~f~f~~g~~~~ 271 (334)
T 1j71_A 212 ---------NADVVLDSGTTITYFSQSTADKFARIVGATWD--------SRNEIYRLPSCDL---SGDAVFNFDQGVKIT 271 (334)
T ss_dssp ---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE--------TTTTEEECSSSCC---CSEEEEEESTTCEEE
T ss_pred ---------CccEEEeCCCCcEecCHHHHHHHHHHcCCccc--------CCCceEEEEcCCC---CCceEEEEcCCcEEE
Confidence 24699999999999999999999999987642 2334688 89963 899999997789999
Q ss_pred eCCCceEEEeeeeCCceEEEEEEEecCCCceeeCceEEeeEEEEEECCCCEEEEEeCCCCCCcceee
Q 010981 383 LKPEEYLIHLGFYDGAAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLSVNVSI 449 (496)
Q Consensus 383 i~p~~y~~~~~~~~~~~~~cl~i~~~~~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~c~~~~~~~~ 449 (496)
|++++|+++.. ....|.++|+.. ..||||++|||++|+|||++++|||||+++|..+.+|++
T Consensus 272 i~~~~y~~~~~---~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~~ 333 (334)
T 1j71_A 272 VPLSELILKDS---DSSICYFGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSSSDISA 333 (334)
T ss_dssp EEGGGGEEECS---SSSCEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSCCCEEE
T ss_pred ECHHHheeecC---CCCeeEEEEeEC--CCcEEChHhhccEEEEEECCCCEEEEEecCCCCccceEE
Confidence 99999999842 122477788875 469999999999999999999999999999998888875
No 10
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=7.2e-57 Score=449.35 Aligned_cols=295 Identities=25% Similarity=0.462 Sum_probs=253.6
Q ss_pred eeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCC--CCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCCC
Q 010981 81 WLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSN--CPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQ 158 (496)
Q Consensus 81 ~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~--C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~~ 158 (496)
..|+++|+||||+|+|.|+|||||+++||+|..|.. |..+ +.|||++|+|++.
T Consensus 13 ~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~------------------ 67 (329)
T 1dpj_A 13 AQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLH-------SKYDHEASSSYKA------------------ 67 (329)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEE------------------
T ss_pred CEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCc-------CcCCcccCcCeEE------------------
Confidence 499999999999999999999999999999999986 7665 7899999999964
Q ss_pred CCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccC-CCCCCCCCcceeeecCCCCCc-
Q 010981 159 CPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTG-DLSKTDKAIDGIFGFGQGDLS- 236 (496)
Q Consensus 159 c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~-~~~~~~~~~~GIlGLg~~~~s- 236 (496)
..|.|.+.|++|+ +.|.+++|+|+|++.. ..++.|||++...+ .| .....+||||||++..+
T Consensus 68 -----~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~f--~~~~~~GilGLg~~~~s~ 131 (329)
T 1dpj_A 68 -----NGTEFAIQYGTGS-LEGYISQDTLSIGDLT--------IPKQDFAEATSEPGLTF--AFGKFDGILGLGYDTISV 131 (329)
T ss_dssp -----EEEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCHHHH--TTCSCSEEEECSCGGGCG
T ss_pred -----CCcEEEEEECCce-EEEEEEEEEEEECCeE--------ECCeEEEEEEecCcccc--ccCCcceEEEeCCchhhc
Confidence 4589999999995 8999999999998643 56799999998765 22 23567999999998654
Q ss_pred -----hHHHHHhcCCCC-ceeEEeecCCC---CccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEEeec
Q 010981 237 -----VISQLASRGITP-RVFSHCLKGQG---NGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQLLSI 303 (496)
Q Consensus 237 -----~~~~l~~~g~i~-~~FS~~l~~~~---~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~ 303 (496)
++.+|++||+|+ ++||+||.+.. ..+|.|+||++|+ +++.|+|+. .+.+|.|.+++|+|+++.+..
T Consensus 132 ~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 210 (329)
T 1dpj_A 132 DKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVR-RKAYWEVKFEGIGLGDEYAEL 210 (329)
T ss_dssp GGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEEEEC
T ss_pred cCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcC-CCceEEEEeeeEEECCeEecC
Confidence 678999999996 89999997642 2479999999994 689999998 568999999999999988742
Q ss_pred CcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEe
Q 010981 304 DPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVL 383 (496)
Q Consensus 304 ~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i 383 (496)
.+..+||||||+++++|++++++|.+++.+. ....++|.++|.....+|+|+|+| +|.+++|
T Consensus 211 --------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~---------~~~~g~~~~~C~~~~~~P~i~f~f-~g~~~~i 272 (329)
T 1dpj_A 211 --------ESHGAAIDTGTSLITLPSGLAEMINAEIGAK---------KGWTGQYTLDCNTRDNLPDLIFNF-NGYNFTI 272 (329)
T ss_dssp --------SSCEEEECTTCSCEEECHHHHHHHHHHHTCE---------ECTTSSEEECGGGGGGCCCEEEEE-TTEEEEE
T ss_pred --------CCccEEeeCCCCcEECCHHHHHHHHHHhCCc---------cCCCCeEEEECCCCCcCCcEEEEE-CCEEEEE
Confidence 3467999999999999999999999998643 124578999999888899999999 7899999
Q ss_pred CCCceEEEeeeeCCceEEEEEEEecC-----CCceeeCceEEeeEEEEEECCCCEEEEEeCC
Q 010981 384 KPEEYLIHLGFYDGAAMWCIGFEKSP-----GGVSILGDLVLKDKIFVYDLARQRVGWANYD 440 (496)
Q Consensus 384 ~p~~y~~~~~~~~~~~~~cl~i~~~~-----~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~ 440 (496)
+|++|+++.. ..|.++|+..+ ...||||++|||++|+|||++++|||||+++
T Consensus 273 ~~~~y~~~~~-----~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 273 GPYDYTLEVS-----GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp CTTTSEEEET-----TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CHHHhEecCC-----CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 9999999752 46777898752 4679999999999999999999999999875
No 11
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.8e-57 Score=452.38 Aligned_cols=297 Identities=28% Similarity=0.444 Sum_probs=252.9
Q ss_pred ceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCC--CCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCC
Q 010981 80 YWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCS--NCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTAT 157 (496)
Q Consensus 80 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~--~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~ 157 (496)
+..|+++|+||||||++.|+|||||+++||+|..|. .|..+ +.|||++|+|++..
T Consensus 13 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~---------------- 69 (323)
T 3cms_A 13 DSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNH-------QRFDPRKSSTFQNL---------------- 69 (323)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEEE----------------
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCC-------CCCCCccCCCeEEC----------------
Confidence 449999999999999999999999999999999994 58765 78999999999753
Q ss_pred CCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC--
Q 010981 158 QCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL-- 235 (496)
Q Consensus 158 ~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 235 (496)
.|.|.++|++|+ +.|.+++|+|+|++.. ..++.|||+....+.. +.....+||||||++..
T Consensus 70 -------~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~ 132 (323)
T 3cms_A 70 -------GKPLSIHYGTGS-MQGILGYDTVTVSNIV--------DIQQTVGLSTQEPGDF-FTYAEFDGILGMAYPSLAS 132 (323)
T ss_dssp -------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCSHH-HHHSSCSEEEECSCGGGSC
T ss_pred -------CcEEEEEeCCCC-eEEEEEEEEEEECCeE--------EeccEEEEEEeccccc-ccccCCceEEecCcchhhc
Confidence 578999999998 7999999999998643 5679999999876521 11246799999999754
Q ss_pred ----chHHHHHhcCCCC-ceeEEeecCCCCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEEeecCcc
Q 010981 236 ----SVISQLASRGITP-RVFSHCLKGQGNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPS 306 (496)
Q Consensus 236 ----s~~~~l~~~g~i~-~~FS~~l~~~~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~~~~ 306 (496)
+++++|++||+|+ ++||+||++.... |.|+||++|+ +++.|+|+. .+.+|.|++++|+|+++.+..
T Consensus 133 ~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~-G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~--- 207 (323)
T 3cms_A 133 EYSIPVFDNMMNRHLVAQDLFSVYMDRNGQE-SMLTLGAIDPSYYTGSLHWVPVT-VQQYWQFTVDSVTISGVVVAC--- 207 (323)
T ss_dssp TTCCCHHHHHHHTTCSSSSEEEEECCTTSSC-EEEEESCCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEEEES---
T ss_pred cCCCCHHHHHHHCCCCCCCEEEEEECCCCCC-EEEEECCCChhhccCceEEEECc-cCCeEEEEEeeEEECCEEeec---
Confidence 4889999999996 8999999986443 9999999994 689999998 468999999999999988743
Q ss_pred cccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEeCCC
Q 010981 307 AFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPE 386 (496)
Q Consensus 307 ~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i~p~ 386 (496)
..+..++|||||+++++|++++++|.+++.+.. ...+.|.++|.....+|+|+|+| +|.+++|+|+
T Consensus 208 ----~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~---------~~~g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~ 273 (323)
T 3cms_A 208 ----EGGCQAILDTGTSKLVGPSSDILNIQQAIGATQ---------NQYGEFDIDCDNLSYMPTVVFEI-NGKMYPLTPS 273 (323)
T ss_dssp ----TTCEEEEECTTCCSEEECHHHHHHHHHHHTCEE---------ETTTEEEECTTCTTTSCCEEEEE-TTEEEEECHH
T ss_pred ----CCCcEEEEecCCccEeCCHHHHHHHHHHhCCee---------cCCCcEEEECCCCccCceEEEEE-CCEEEEECHH
Confidence 234679999999999999999999999986532 12356889999878899999999 8899999999
Q ss_pred ceEEEeeeeCCceEEEEEEEecC-CCceeeCceEEeeEEEEEECCCCEEEEEeCC
Q 010981 387 EYLIHLGFYDGAAMWCIGFEKSP-GGVSILGDLVLKDKIFVYDLARQRVGWANYD 440 (496)
Q Consensus 387 ~y~~~~~~~~~~~~~cl~i~~~~-~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~ 440 (496)
+|+++ +...|.++|+..+ ...||||++|||++|+|||++++|||||+++
T Consensus 274 ~y~~~-----~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 274 AYTSQ-----DQGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp HHEEE-----ETTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HhccC-----CCCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 99997 1456777898864 5789999999999999999999999999874
No 12
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.9e-56 Score=445.22 Aligned_cols=298 Identities=25% Similarity=0.436 Sum_probs=251.1
Q ss_pred ceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCCCC
Q 010981 80 YWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQC 159 (496)
Q Consensus 80 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~~c 159 (496)
+..|+++|+||||+|+|.|+|||||+++||+|..|..| .+ ..+.|+|++|+|++.
T Consensus 14 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~-----~~~~y~~~~SsT~~~------------------- 68 (325)
T 2apr_A 14 DIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GS-----GQTKYDPNQSSTYQA------------------- 68 (325)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CT-----TSCCBCGGGCTTCEE-------------------
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hc-----CCCCCCcccCCCeee-------------------
Confidence 34999999999999999999999999999999999988 22 247999999999974
Q ss_pred CCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC----
Q 010981 160 PSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL---- 235 (496)
Q Consensus 160 ~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~---- 235 (496)
..|.|.++|++|+.+.|.+++|+|+|++.. ..++.|||+...++.|. ....+||||||++..
T Consensus 69 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~f~--~~~~~GilGLg~~~~s~~~ 134 (325)
T 2apr_A 69 ----DGRTWSISYGDGSSASGILAKDNVNLGGLL--------IKGQTIELAKREAASFA--SGPNDGLLGLGFDTITTVR 134 (325)
T ss_dssp ----EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--TSSCSEEEECSCGGGCSST
T ss_pred ----CCCEEEEEECCCCCEEEEEEEEEEEECCEE--------ECcEEEEEEeccCcccc--cCCCceEEEeCCccccccc
Confidence 358999999999988999999999998643 56799999998766432 234899999999754
Q ss_pred ---chHHHHHhcCCCC-ceeEEeecCC-CCccceEEeCCCC----CCCeEEeeCCCCCCceeEEEeEEEEccEEeecCcc
Q 010981 236 ---SVISQLASRGITP-RVFSHCLKGQ-GNGGGILVLGEIL----EPSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPS 306 (496)
Q Consensus 236 ---s~~~~l~~~g~i~-~~FS~~l~~~-~~~~G~l~~Gg~d----~~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~~~~ 306 (496)
+++++|++||+|+ ++||+||.+. ....|.|+||++| ++++.|+|+.+.+.+|.|++++|+|+++ +.
T Consensus 135 ~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~-~~---- 209 (325)
T 2apr_A 135 GVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS-TV---- 209 (325)
T ss_dssp TCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE-EE----
T ss_pred CCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE-ec----
Confidence 4889999999995 8999999653 3458999999998 4789999998667899999999999993 21
Q ss_pred cccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEeCCC
Q 010981 307 AFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPE 386 (496)
Q Consensus 307 ~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i~p~ 386 (496)
..+..+||||||++++||+++|+++++++.+.+... +.|.++|.. ..+|+|+|+| +|.+++|+++
T Consensus 210 ----~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~---------g~~~~~C~~-~~~p~i~f~f-~g~~~~ip~~ 274 (325)
T 2apr_A 210 ----ASSFDGILDTGTTLLILPNNIAASVARAYGASDNGD---------GTYTISCDT-SAFKPLVFSI-NGASFQVSPD 274 (325)
T ss_dssp ----ECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS---------SCEEECSCG-GGCCCEEEEE-TTEEEEECGG
T ss_pred ----CCCceEEEecCCccEECCHHHHHHHHHHHhcccCCC---------CeEEEECCC-CCCCcEEEEE-CCEEEEECHH
Confidence 234579999999999999999999999997764321 348899984 3489999999 5569999999
Q ss_pred ceEEEeeeeCCceEEEEEEEecCCCceeeCceEEeeEEEEEECCCCEEEEEeCC
Q 010981 387 EYLIHLGFYDGAAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYD 440 (496)
Q Consensus 387 ~y~~~~~~~~~~~~~cl~i~~~~~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~ 440 (496)
+|+++.. ...|..+|+..+.+.||||++|||++|+|||++++|||||+++
T Consensus 275 ~~~~~~~----~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 275 SLVFEEF----QGQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp GGEEEEE----TTEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HEEEcCC----CCeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 9998642 4467677877655689999999999999999999999999874
No 13
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=5.1e-57 Score=448.91 Aligned_cols=298 Identities=29% Similarity=0.451 Sum_probs=256.2
Q ss_pred cceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCC--CCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCC
Q 010981 79 SYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCS--NCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTA 156 (496)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~--~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~ 156 (496)
.+..|+++|+||||||++.|++||||+++||+|..|. .|..+ +.|||++|+|++..
T Consensus 9 ~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~--------------- 66 (320)
T 4aa9_A 9 LDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNH-------HRFDPRKSSTFRNL--------------- 66 (320)
T ss_dssp CCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEEE---------------
T ss_pred cCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCC-------CCCCCCCCcCeEcC---------------
Confidence 3459999999999999999999999999999999998 47655 89999999999754
Q ss_pred CCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC-
Q 010981 157 TQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL- 235 (496)
Q Consensus 157 ~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~- 235 (496)
.|.|.+.|++|+ ++|.+++|+|+|++.. ..++.|||+....+... .....+||||||++..
T Consensus 67 --------~~~~~i~Yg~gs-~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s 128 (320)
T 4aa9_A 67 --------GKPLSIHYGTGS-MEGFLGYDTVTVSNIV--------DPNQTVGLSTEQPGEVF-TYSEFDGILGLAYPSLA 128 (320)
T ss_dssp --------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCSHHH-HSCCCSEEEECSCGGGS
T ss_pred --------CcEEEEEECCcE-EEEEEEEEEEEECCEe--------ecCeEEEEEEEcccccc-cccCcccEEecCccccc
Confidence 479999999998 7999999999998643 56799999998776321 2346799999998753
Q ss_pred -----chHHHHHhcCCCC-ceeEEeecCCCCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEEeecCc
Q 010981 236 -----SVISQLASRGITP-RVFSHCLKGQGNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDP 305 (496)
Q Consensus 236 -----s~~~~l~~~g~i~-~~FS~~l~~~~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~~~ 305 (496)
+++++|++||+|+ ++||+||.++ ..+|.|+||++|+ +++.|+|+. .+.+|.|++++|.|+++.+..+
T Consensus 129 ~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~- 205 (320)
T 4aa9_A 129 SEYSVPVFDNMMDRHLVARDLFSVYMDRN-GQGSMLTLGAIDPSYYTGSLHWVPVT-LQQYWQFTVDSVTINGVAVACV- 205 (320)
T ss_dssp CTTCCCHHHHHHHTTCSSSSEEEEECCSS-SSCCEEEETCCCGGGEEEEEEEEECS-SBTTBEEEECEEEETTEEEEST-
T ss_pred ccCCCCHHHHHHhCCCCCCceEEEEeCCC-CCCeEEEEcccCHHHccCceEEEEcc-cCCceEEEEeEEEECCEEeccC-
Confidence 4899999999996 8999999986 5689999999994 689999997 5789999999999999887532
Q ss_pred ccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEeCC
Q 010981 306 SAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKP 385 (496)
Q Consensus 306 ~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i~p 385 (496)
.+..++|||||++++||++++++|.+++++.. ...+.|.++|+....+|+|+|+| +|.+++|+|
T Consensus 206 ------~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~---------~~~g~~~~~C~~~~~~p~i~f~f-~g~~~~l~~ 269 (320)
T 4aa9_A 206 ------GGCQAILDTGTSVLFGPSSDILKIQMAIGATE---------NRYGEFDVNCGNLRSMPTVVFEI-NGRDYPLSP 269 (320)
T ss_dssp ------TCEEEEECTTCSSEEEEHHHHHHHHHHTTCEE---------CTTSCEEECGGGGGGCCCEEEEE-TTEEEEECH
T ss_pred ------CCcEEEEECCCCcEECCHHHHHHHHHHhCCcc---------cCCCcEEEeCCCCCcCceEEEEE-CCEEEEECH
Confidence 34579999999999999999999999986542 13456999999888899999999 899999999
Q ss_pred CceEEEeeeeCCceEEEEEEEecC-CCceeeCceEEeeEEEEEECCCCEEEEEeCC
Q 010981 386 EEYLIHLGFYDGAAMWCIGFEKSP-GGVSILGDLVLKDKIFVYDLARQRVGWANYD 440 (496)
Q Consensus 386 ~~y~~~~~~~~~~~~~cl~i~~~~-~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~ 440 (496)
++|+.+. ...|.++|+... ...||||++|||++|+|||++++|||||+++
T Consensus 270 ~~y~~~~-----~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 270 SAYTSKD-----QGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp HHHEEEE-----TTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHhccCC-----CCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 9999762 456777898754 4579999999999999999999999999975
No 14
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.3e-56 Score=446.64 Aligned_cols=296 Identities=27% Similarity=0.457 Sum_probs=254.7
Q ss_pred ceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCC--CCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCC
Q 010981 80 YWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCS--NCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTAT 157 (496)
Q Consensus 80 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~--~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~ 157 (496)
+..|+++|+||||||++.|+|||||+++||+|..|. .|..+ +.|||++|+|++..
T Consensus 11 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~---------------- 67 (324)
T 1am5_A 11 DTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNH-------NKFKPRQSSTYVET---------------- 67 (324)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTS-------CCBCGGGCTTCEEE----------------
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCC-------CcCCCccCCCeEeC----------------
Confidence 349999999999999999999999999999999997 48765 78999999999753
Q ss_pred CCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC--
Q 010981 158 QCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL-- 235 (496)
Q Consensus 158 ~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 235 (496)
.|.|.+.|++|+ +.|.+++|+|+|++.. ..++.|||+....+.+. .....+||||||++..
T Consensus 68 -------~~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~ 130 (324)
T 1am5_A 68 -------GKTVDLTYGTGG-MRGILGQDTVSVGGGS--------DPNQELGESQTEPGPFQ-AAAPFDGILGLAYPSIAA 130 (324)
T ss_dssp -------EEEEEEECSSCE-EEEEEEEEEEESSSSC--------EEEEEEEEEEECCSTTT-TTCSSSEEEECSCGGGCG
T ss_pred -------CcEEEEEECCCC-eEEEEEECceeECCcE--------EcccEEEEEEecccccc-cCCCCceEEecCCccccc
Confidence 579999999998 5999999999998643 56799999998876432 2457899999999764
Q ss_pred ----chHHHHHhcCCCC-ceeEEeecCCCCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEEeecCcc
Q 010981 236 ----SVISQLASRGITP-RVFSHCLKGQGNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPS 306 (496)
Q Consensus 236 ----s~~~~l~~~g~i~-~~FS~~l~~~~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~~~~ 306 (496)
+++++|++||+|+ ++||+||++.+..+|.|+||++|+ +++.|+|+. .+.+|.|++++|+|+++.+..
T Consensus 131 ~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~--- 206 (324)
T 1am5_A 131 AGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVT-AEKYWQVALDGITVNGQTAAC--- 206 (324)
T ss_dssp GGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEE-EETTEEEEECEEEETTEECCC---
T ss_pred cCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecC-CCcEEEEEEeEEEECCceeec---
Confidence 4889999999996 899999998755689999999993 789999998 467999999999999987521
Q ss_pred cccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEeCCC
Q 010981 307 AFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPE 386 (496)
Q Consensus 307 ~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i~p~ 386 (496)
.. ..++|||||+++++|++++++|.+++.+. . ..+.|.++|...+.+|+|+|+| +|.+++|+|+
T Consensus 207 ----~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~---------~~g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~ 270 (324)
T 1am5_A 207 ----EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS-E---------NQGEMMGNCASVQSLPDITFTI-NGVKQPLPPS 270 (324)
T ss_dssp ----CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE-E---------CCCCEECCTTSSSSSCCEEEEE-TTEEEEECHH
T ss_pred ----cC-ceEEEecCCccEECCHHHHHHHHHHhCCc-c---------cCCcEEEeCCCcccCCcEEEEE-CCEEEEECHH
Confidence 12 67999999999999999999999998654 1 2345889999878899999999 8899999999
Q ss_pred ceEEEeeeeCCceEEEEEEEecC-----CCceeeCceEEeeEEEEEECCCCEEEEEeCC
Q 010981 387 EYLIHLGFYDGAAMWCIGFEKSP-----GGVSILGDLVLKDKIFVYDLARQRVGWANYD 440 (496)
Q Consensus 387 ~y~~~~~~~~~~~~~cl~i~~~~-----~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~ 440 (496)
+|+++. ...|.++|+..+ ...||||++|||++|+|||++++|||||+++
T Consensus 271 ~y~~~~-----~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 271 AYIEGD-----QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp HHEEES-----SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred HhcccC-----CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 999974 346777898753 4579999999999999999999999999974
No 15
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.8e-56 Score=446.58 Aligned_cols=301 Identities=29% Similarity=0.496 Sum_probs=255.4
Q ss_pred CcceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCC--CCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCC
Q 010981 78 DSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSN--CPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTT 155 (496)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~--C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~ 155 (496)
+.+..|+++|+||||+|++.|+|||||+++||+|..|.. |..+ +.|||++|+|++..
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~-------------- 67 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSH-------SRFNPSESSTYSTN-------------- 67 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEEE--------------
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCC-------CcCCCccCCCeEEC--------------
Confidence 344599999999999999999999999999999999974 8765 78999999999753
Q ss_pred CCCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC
Q 010981 156 ATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL 235 (496)
Q Consensus 156 ~~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~ 235 (496)
.|.|.++|++|+ +.|.+++|+|+|++.. ..++.|||+....+.+. .....+||||||++..
T Consensus 68 ---------~~~~~i~Yg~gs-~~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~ 128 (329)
T 1htr_B 68 ---------GQTFSLQYGSGS-LTGFFGYDTLTVQSIQ--------VPNQEFGLSENEPGTNF-VYAQFDGIMGLAYPAL 128 (329)
T ss_dssp ---------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEESSCSSGGG-GGCSCCEEEECCCCSC
T ss_pred ---------CcEEEEEeCCCC-eEEEEEeeeEEEcceE--------ECceEEEEEEEcccccc-ccCCCceEEecCCCcc
Confidence 579999999998 5999999999998643 56799999998766421 2356799999999865
Q ss_pred c------hHHHHHhcCCCC-ceeEEeecCCCCc-cceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEEeec
Q 010981 236 S------VISQLASRGITP-RVFSHCLKGQGNG-GGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQLLSI 303 (496)
Q Consensus 236 s------~~~~l~~~g~i~-~~FS~~l~~~~~~-~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~ 303 (496)
+ ++++|++||+|+ ++||+||++.... +|.|+||++|+ +++.|+|+. .+.+|.|++++|+|+++.+..
T Consensus 129 s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 207 (329)
T 1htr_B 129 SVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVT-QELYWQIGIEEFLIGGQASGW 207 (329)
T ss_dssp CCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBC-SSSSCEEEECEEEETTEECCT
T ss_pred cccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECC-CCceEEEEEeEEEECCceeee
Confidence 3 889999999995 8999999986544 89999999994 689999998 468999999999999987531
Q ss_pred CcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEe
Q 010981 304 DPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVL 383 (496)
Q Consensus 304 ~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i 383 (496)
...+..++|||||++++||++++++|.+++.+... ..+.|.++|...+.+|+|+|+| +|.+++|
T Consensus 208 ------~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~---------~~g~~~~~C~~~~~~P~i~f~f-~g~~~~i 271 (329)
T 1htr_B 208 ------CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQED---------EYGQFLVNCNSIQNLPSLTFII-NGVEFPL 271 (329)
T ss_dssp ------TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC---------TTSCEEECGGGGGGSCCEEEEE-TTEEEEE
T ss_pred ------cCCCceEEEecCCccEECCHHHHHHHHHHhCCeec---------CCCeEEEeCCCcccCCcEEEEE-CCEEEEE
Confidence 12356799999999999999999999999865421 1234889999878899999999 8899999
Q ss_pred CCCceEEEeeeeCCceEEEEEEEecC-----CC-ceeeCceEEeeEEEEEECCCCEEEEEeCC
Q 010981 384 KPEEYLIHLGFYDGAAMWCIGFEKSP-----GG-VSILGDLVLKDKIFVYDLARQRVGWANYD 440 (496)
Q Consensus 384 ~p~~y~~~~~~~~~~~~~cl~i~~~~-----~~-~~iLG~~fl~~~y~VfD~~~~~IGfa~~~ 440 (496)
+|++|+++.. +.|.++|+..+ .. .||||++|||++|+|||++++|||||+++
T Consensus 272 ~~~~y~~~~~-----g~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 272 PPSSYILSNN-----GYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp CHHHHEEECS-----SCEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CHHHhcccCC-----CEEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 9999999852 36767898753 34 79999999999999999999999999874
No 16
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=9.5e-57 Score=451.00 Aligned_cols=301 Identities=23% Similarity=0.420 Sum_probs=256.0
Q ss_pred ceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCC----CCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCC
Q 010981 80 YWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCS----NCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTT 155 (496)
Q Consensus 80 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~----~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~ 155 (496)
+..|+++|+||||||++.|++||||+++||+|..|. .|..+ +.|+|++|+|++.
T Consensus 17 d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~-------~~y~~~~SsT~~~--------------- 74 (341)
T 3k1w_A 17 DTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH-------KLFDASDSSSYKH--------------- 74 (341)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTS-------CCBCGGGCTTCEE---------------
T ss_pred CCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCC-------CCCCCCcCcCeeE---------------
Confidence 349999999999999999999999999999999998 46654 8999999999974
Q ss_pred CCCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC
Q 010981 156 ATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL 235 (496)
Q Consensus 156 ~~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~ 235 (496)
..|.|.+.|++|+ +.|.+++|+|+|++.. . ++.|||+....+.. +.....+||||||++..
T Consensus 75 --------~~~~~~i~Yg~gs-~~G~~~~D~v~ig~~~--------v-~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~ 135 (341)
T 3k1w_A 75 --------NGTELTLRYSTGT-VSGFLSQDIITVGGIT--------V-TQMFGEVTEMPALP-FMLAEFDGVVGMGFIEQ 135 (341)
T ss_dssp --------EEEEEEEEETTEE-EEEEEEEEEEEETTEE--------E-EEEEEEEEECCHHH-HTTCSSSEEEECSCGGG
T ss_pred --------CCCEEEEEECCcE-EEEEEEEEEEEECCce--------e-eEEEEEEEEccccc-cccCCcceEEECCchhh
Confidence 4589999999998 8999999999998653 4 79999999876531 12456799999999865
Q ss_pred c------hHHHHHhcCCCC-ceeEEeecCCC----CccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEE
Q 010981 236 S------VISQLASRGITP-RVFSHCLKGQG----NGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQL 300 (496)
Q Consensus 236 s------~~~~l~~~g~i~-~~FS~~l~~~~----~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~ 300 (496)
+ ++++|++||+|+ ++||+||.+.. ..+|.|+||++|+ +++.|+|+. .+.+|.|++++|.|+++.
T Consensus 136 s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~ 214 (341)
T 3k1w_A 136 AIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSVGSST 214 (341)
T ss_dssp CGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECS-STTSCEEEECCEEETTEE
T ss_pred cccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecC-CCCEEEEEEeEEEECCEE
Confidence 4 799999999996 89999999864 3489999999994 689999998 578999999999999987
Q ss_pred eecCcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcE
Q 010981 301 LSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGAS 380 (496)
Q Consensus 301 ~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~ 380 (496)
+.. ..+..++|||||+++++|++++++|++++.+... . .+ |.++|+....+|+|+|+| +|.+
T Consensus 215 ~~~-------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~--------~-~g-~~~~C~~~~~~p~i~f~f-~g~~ 276 (341)
T 3k1w_A 215 LLC-------EDGCLALVDTGASYISGSTSSIEKLMEALGAKKR--------L-FD-YVVKCNEGPTLPDISFHL-GGKE 276 (341)
T ss_dssp EEC-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC--------S-SC-EEEEGGGGGGCCCEEEEE-TTEE
T ss_pred eec-------CCCCEEEEECCCChhcCCHHHHHHHHHHcCCeec--------C-CC-eEEeCCCCCcCCcEEEEE-CCEE
Confidence 532 2346799999999999999999999999975531 1 23 999999888899999999 7999
Q ss_pred EEeCCCceEEEeeeeCCceEEEEEEEecC-----CCceeeCceEEeeEEEEEECCCCEEEEEeCCC
Q 010981 381 MVLKPEEYLIHLGFYDGAAMWCIGFEKSP-----GGVSILGDLVLKDKIFVYDLARQRVGWANYDC 441 (496)
Q Consensus 381 ~~i~p~~y~~~~~~~~~~~~~cl~i~~~~-----~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~c 441 (496)
++|+|++|+++... .+...|.++|+..+ ...||||++|||++|+|||++++|||||++++
T Consensus 277 ~~l~~~~~~~~~~~-~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~~ 341 (341)
T 3k1w_A 277 YTLTSADYVFQESY-SSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALARH 341 (341)
T ss_dssp EEECHHHHBCCSCC-CTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEECC
T ss_pred EEECHHHheeEccC-CCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECCC
Confidence 99999999987532 23556777898742 46799999999999999999999999999874
No 17
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=4e-56 Score=455.74 Aligned_cols=345 Identities=21% Similarity=0.379 Sum_probs=263.4
Q ss_pred eeeeccCCCCCcccCCcceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCceec
Q 010981 63 VEFPVQGSSDPFLIGDSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVS 142 (496)
Q Consensus 63 ~~~~~~~~~~~~~~g~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~ 142 (496)
+.+|+.++ +.+..|+++|.||||||+|.|+|||||+++||+|..| .+|+|++.++
T Consensus 10 ~~~pl~~~-------~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~------------------~~Sst~~~~~ 64 (403)
T 3aup_A 10 VVLPVQND-------GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ------------------YSSKTYQAPF 64 (403)
T ss_dssp EEEEEEEC-------TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC------------------CCCSSCBCCC
T ss_pred EEEeeecC-------CCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC------------------CCCCCCCccC
Confidence 45666532 2234999999999999999999999999999998753 2589999999
Q ss_pred CCCccccCccCCC--------CCCCCCCCCCCeeeeEeC-CCCeEEEEEEEEEEEEeeecCCc---ccccccccEEEeee
Q 010981 143 CSDPLCASEIQTT--------ATQCPSGSNQCSYSFEYG-DGSGTSGSYIYDTLYFDAILGES---LIANSTALIVFGCS 210 (496)
Q Consensus 143 C~~~~C~~~~~~~--------~~~c~~~~~~~~~~~~Y~-~g~~~~G~~~~D~v~i~~~~~~~---~~~~~~~~~~fG~~ 210 (496)
|.++.|.....+. ...|. +..|.|.+.|+ +|+.+.|.+++|+|+|++..+.. .....+.++.|||+
T Consensus 65 C~s~~C~~~~~~~c~~c~~~~~s~~~--~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~ 142 (403)
T 3aup_A 65 CHSTQCSRANTHQCLSCPAASRPGCH--KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCA 142 (403)
T ss_dssp TTBHHHHHTTCCCEEECSSSCBTTBC--SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEE
T ss_pred CCCccccCccccCccccCCCCCCCCC--CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECC
Confidence 9999998664431 12343 36799999998 78889999999999998743221 00013567999999
Q ss_pred eeccCC-CCCCCCCcceeeecCCCCCchHHHHHhcCCCCceeEEeecCCCCccceEEeCCCCC-------C-----CeEE
Q 010981 211 TYQTGD-LSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHCLKGQGNGGGILVLGEILE-------P-----SIVY 277 (496)
Q Consensus 211 ~~~~~~-~~~~~~~~~GIlGLg~~~~s~~~~l~~~g~i~~~FS~~l~~~~~~~G~l~~Gg~d~-------~-----~l~~ 277 (496)
..+.+. + ....++||||||++..+++.||+++.+.+++||+||.+....+|.|+||+ |+ | ++.|
T Consensus 143 ~~~~~~~~--~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~ 219 (403)
T 3aup_A 143 PSFLVQKG--LPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAF 219 (403)
T ss_dssp CGGGGSSS--SSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEE
T ss_pred cccccccC--CCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceee
Confidence 987543 2 13578999999999999999998665556999999998656789999999 62 4 8999
Q ss_pred eeCCCC-CCceeEEEeEEEEccEEe-ecCccccc--ccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcC-CCCC
Q 010981 278 SPLVPS-KPHYNLNLHGITVNGQLL-SIDPSAFA--ASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVT-PTMS 352 (496)
Q Consensus 278 ~pl~~~-~~~w~v~l~~i~v~~~~~-~~~~~~~~--~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~-~~~~ 352 (496)
+|++.+ +.+|.|+|++|+|+++.+ .++...+. ......+||||||++++||+++|++|+++|.+++..... ....
T Consensus 220 ~Pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~ 299 (403)
T 3aup_A 220 TPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVA 299 (403)
T ss_dssp EECEECTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCT
T ss_pred cccccCCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCC
Confidence 999854 369999999999999988 66554432 123457999999999999999999999999877643211 1111
Q ss_pred CCCceEEeeCCccccCCeEEEEecCC--cEEEeCCCceEEEeeeeCCceEEEEEEEecC---CCceeeCceEEeeEEEEE
Q 010981 353 KGKQCYLVSNSVSEIFPQVSLNFEGG--ASMVLKPEEYLIHLGFYDGAAMWCIGFEKSP---GGVSILGDLVLKDKIFVY 427 (496)
Q Consensus 353 ~~~~~y~~~c~~~~~~P~i~f~f~gg--~~~~i~p~~y~~~~~~~~~~~~~cl~i~~~~---~~~~iLG~~fl~~~y~Vf 427 (496)
....| ++|+..+.+|+|+|+|+|+ ++|+|+|++|+++.. ++..|++|+..+ ...||||+.|||++|+||
T Consensus 300 ~~~~c--~~c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~----~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvf 373 (403)
T 3aup_A 300 PFGLC--FNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQ----PGVTCLGVMNGGMQPRAEITLGARQLEENLVVF 373 (403)
T ss_dssp TCSCE--ECGGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC-------CEEECEEECCSCCSSSEEECHHHHTTSCEEE
T ss_pred CCCce--EECCCcCcCCcEEEEEcCCCceEEEEcccceEEEcC----CCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEE
Confidence 23455 4787667899999999655 699999999999752 233455999875 257999999999999999
Q ss_pred ECCCCEEEE-------EeCCCCC
Q 010981 428 DLARQRVGW-------ANYDCSL 443 (496)
Q Consensus 428 D~~~~~IGf-------a~~~c~~ 443 (496)
|++++|||| ++.+|+.
T Consensus 374 D~~~~rIGf~A~~~~~~~~~C~~ 396 (403)
T 3aup_A 374 DLARSRVGFSTSSLHSHGVKCAD 396 (403)
T ss_dssp ETTTTEEEEESSCGGGGTCCGGG
T ss_pred ECCCCEEEEecccccccCCCccc
Confidence 999999999 5556653
No 18
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=4.3e-56 Score=443.49 Aligned_cols=302 Identities=25% Similarity=0.427 Sum_probs=249.5
Q ss_pred ceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCCCC
Q 010981 80 YWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQC 159 (496)
Q Consensus 80 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~~c 159 (496)
+..|+++|+||||+|+|.|+|||||+++||+|..|..|..+ ..+.|||++|+|++.+
T Consensus 14 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~-----~~~~y~~~~SsT~~~~------------------ 70 (329)
T 3c9x_A 14 DSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSAT-----GHAIYTPSKSSTSKKV------------------ 70 (329)
T ss_dssp CCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHT-----TSCCBCGGGCTTCEEC------------------
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccC-----CCCcCCcccCcCceEc------------------
Confidence 34999999999999999999999999999999999876432 1379999999999754
Q ss_pred CCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC----
Q 010981 160 PSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL---- 235 (496)
Q Consensus 160 ~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~---- 235 (496)
+.|.|.++|++|+.+.|.+++|+|+|++.. ..++.|||+...++.+. .....+||||||++..
T Consensus 71 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~~ 137 (329)
T 3c9x_A 71 ----SGASWSISYGDGSSSSGDVYTDKVTIGGFS--------VNTQGVESATRVSTEFV-QDTVISGLVGLAFDSGNQVR 137 (329)
T ss_dssp ----TTCBEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH-HCTTCCEEEECSCGGGCCCB
T ss_pred ----CCCeEEEEeCCCCcEEEEEEEEEEEECCEE--------EcceEEEEEEecCcccc-ccCCCceeEEeCcccccccC
Confidence 348999999999988999999999998643 56799999998765432 1246799999999753
Q ss_pred -----chHHHHHhcCCCCceeEEeecCCCCccceEEeCCCC----CCCeEEeeCCCCCCceeEEEeEEEEccEEeecCcc
Q 010981 236 -----SVISQLASRGITPRVFSHCLKGQGNGGGILVLGEIL----EPSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPS 306 (496)
Q Consensus 236 -----s~~~~l~~~g~i~~~FS~~l~~~~~~~G~l~~Gg~d----~~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~~~~ 306 (496)
+++++|+++ +.+++||+||.+. .+|.|+||++| ++++.|+|+.+.+.+|.|++++|+|+++.+.
T Consensus 138 ~~~~~~~~~~l~~~-i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~---- 210 (329)
T 3c9x_A 138 PHPQKTWFSNAASS-LAEPLFTADLRHG--QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN---- 210 (329)
T ss_dssp SSCCCCHHHHHHTT-SSSSEEEEECCSS--SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC----
T ss_pred CCCCCCHHHHHHHh-cCCCEEEEEecCC--CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEecc----
Confidence 378899886 3359999999863 58999999998 3789999998667899999999999997652
Q ss_pred cccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEeCCC
Q 010981 307 AFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPE 386 (496)
Q Consensus 307 ~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i~p~ 386 (496)
.....+||||||++++||++++++|.+++.++.. ....+-|.++|. ..+|+|+|+| +|.+++|+++
T Consensus 211 ----~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~-------~~~~~~~~~~C~--~~~P~i~f~f-~g~~~~ip~~ 276 (329)
T 3c9x_A 211 ----RNSIDGIADTGTTLLLLDDNVVDAYYANVQSAQY-------DNQQEGVVFDCD--EDLPSFSFGV-GSSTITIPGD 276 (329)
T ss_dssp ----SCCEEEEECTTCCSEEECHHHHHHHHTTCTTCEE-------ETTTTEEEEETT--CCCCCEEEEE-TTEEEEECGG
T ss_pred ----CCCceEEEECCCCcEeCCHHHHHHHHHhCCCcEE-------cCCCCEEEEECC--CCCCcEEEEE-CCEEEEECHH
Confidence 2345799999999999999999999988744321 123355889998 5789999999 7899999999
Q ss_pred ceEEEeeeeCCceEEEEEEEecC-CCceeeCceEEeeEEEEEECCCCEEEEEeC
Q 010981 387 EYLIHLGFYDGAAMWCIGFEKSP-GGVSILGDLVLKDKIFVYDLARQRVGWANY 439 (496)
Q Consensus 387 ~y~~~~~~~~~~~~~cl~i~~~~-~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~ 439 (496)
+|+++... ++...|.++|+..+ ...||||++|||++|+|||++++|||||+.
T Consensus 277 ~~~~~~~~-~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 277 LLNLTPLE-EGSSTCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp GGEEEESS-TTCSEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred HeeeeccC-CCCCeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 99987421 23456767788765 568999999999999999999999999974
No 19
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.9e-56 Score=460.87 Aligned_cols=297 Identities=24% Similarity=0.363 Sum_probs=257.2
Q ss_pred CcceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCC--CCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCC
Q 010981 78 DSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCS--NCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTT 155 (496)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~--~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~ 155 (496)
+.+..|+++|+||||||++.|++||||+++||+|..|. .|..+ +.|||++|+|++.
T Consensus 134 ~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~-------~~ydps~SsT~~~--------------- 191 (451)
T 3qvc_A 134 LANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESK-------NHYDSSKSKTYEK--------------- 191 (451)
T ss_dssp GBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTS-------CCBCGGGCTTCEE---------------
T ss_pred cCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCC-------CCCCCCCCccccc---------------
Confidence 44569999999999999999999999999999999995 68766 8999999999974
Q ss_pred CCCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeee----ccCCCCCCCCCcceeeecC
Q 010981 156 ATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTY----QTGDLSKTDKAIDGIFGFG 231 (496)
Q Consensus 156 ~~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~----~~~~~~~~~~~~~GIlGLg 231 (496)
.++.|.+.|++|+ +.|.+++|+|+|++.. .. +.|||+.. .++ +. ....+||||||
T Consensus 192 --------~~~~f~i~YgdGs-~~G~~~~Dtv~igg~~--------v~-~~Fg~a~~t~~~~~~-f~--~~~~dGILGLg 250 (451)
T 3qvc_A 192 --------DDTPVKLTSKAGT-ISGIFSKDLVTIGKLS--------VP-YKFIEMTEIVGFEPF-YS--ESDVDGVFGLG 250 (451)
T ss_dssp --------EEEEEEEECSSEE-EEEEEEEEEEEETTEE--------EE-EEEEEEEEEEECTTH-HH--HSCCCEEEECS
T ss_pred --------CCCEEEEEECCCE-EEEEEEEEEEEECCEE--------EE-EEEEEEEeccccCCC-cc--CCCCCEEEecC
Confidence 4579999999999 8999999999998653 55 99999998 555 32 34679999999
Q ss_pred CCCC------chHHHHHhcCCCC-ceeEEeecCCCCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEE
Q 010981 232 QGDL------SVISQLASRGITP-RVFSHCLKGQGNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQL 300 (496)
Q Consensus 232 ~~~~------s~~~~l~~~g~i~-~~FS~~l~~~~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~ 300 (496)
++.. +++++|++||+|+ ++||+||.+.++.+|.|+|||+|+ +++.|+|+. .+.+|.|+++ |.|+++
T Consensus 251 ~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~-~~~~w~v~l~-I~Vgg~- 327 (451)
T 3qvc_A 251 WKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLN-HDLMWQVDLD-VHFGNV- 327 (451)
T ss_dssp SBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECS-STTSSEEEEE-EEETTE-
T ss_pred CCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcc-cCCeeEEEEE-EEECCc-
Confidence 9754 5899999999996 899999998866789999999994 689999998 5789999999 999997
Q ss_pred eecCcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcE
Q 010981 301 LSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGAS 380 (496)
Q Consensus 301 ~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~ 380 (496)
. .....++|||||+++++|++++++|.+++++.. ....++|.++|+ ...+|+|+|+| +|.+
T Consensus 328 ~---------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~--------~~~~g~y~v~C~-~~~~P~itf~f-gg~~ 388 (451)
T 3qvc_A 328 S---------SKKANVILDSATSVITVPTEFFNQFVESASVFK--------VPFLSLYVTTCG-NTKLPTLEYRS-PNKV 388 (451)
T ss_dssp E---------EEEEEEEECTTBSSEEECHHHHHHHHTTTTCEE--------CTTSSCEEEETT-CTTCCCEEEEE-TTEE
T ss_pred c---------CCCceEEEeCCCccccCCHHHHHHHHHHcCCee--------cCCCCeEEeeCC-cCcCCcEEEEE-CCEE
Confidence 1 123579999999999999999999999886542 223567999999 77899999999 8999
Q ss_pred EEeCCCceEEEeeeeCCceEEEEEEEecC--CCceeeCceEEeeEEEEEECCCCEEEEEeCC
Q 010981 381 MVLKPEEYLIHLGFYDGAAMWCIGFEKSP--GGVSILGDLVLKDKIFVYDLARQRVGWANYD 440 (496)
Q Consensus 381 ~~i~p~~y~~~~~~~~~~~~~cl~i~~~~--~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~ 440 (496)
++|+|++|+.+... .+.+.|.++|++.+ ...||||++|||++|+|||++++|||||+++
T Consensus 389 i~lp~~~yi~~~~~-~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 389 YTLEPKQYLEPLEN-IFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EEECHHHHEEECTT-TSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEcHHHheeeccc-CCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99999999998542 24567888999876 4789999999999999999999999999986
No 20
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=3e-56 Score=451.49 Aligned_cols=297 Identities=23% Similarity=0.383 Sum_probs=253.7
Q ss_pred CcceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCC--CCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCC
Q 010981 78 DSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCS--NCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTT 155 (496)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~--~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~ 155 (496)
+.+..|+++|+||||||+|.|+|||||+++||+|..|. .|..+ +.|||++|+|++.
T Consensus 59 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~--------------- 116 (375)
T 1miq_A 59 VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIK-------NLYDSSKSKSYEK--------------- 116 (375)
T ss_dssp TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGS-------CCBCGGGCTTCEE---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCC-------CcCCCccCCceEE---------------
Confidence 44569999999999999999999999999999999997 57665 8999999999974
Q ss_pred CCCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeee----ccCCCCCCCCCcceeeecC
Q 010981 156 ATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTY----QTGDLSKTDKAIDGIFGFG 231 (496)
Q Consensus 156 ~~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~----~~~~~~~~~~~~~GIlGLg 231 (496)
.+|.|.+.|++|+ +.|.+++|+|+|++.. ..+ .|||+.. ++ .| .....+||||||
T Consensus 117 --------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~-~Fg~~~~~~~~~~-~f--~~~~~dGilGLg 175 (375)
T 1miq_A 117 --------DGTKVDITYGSGT-VKGFFSKDLVTLGHLS--------MPY-KFIEVTDTDDLEP-IY--SSVEFDGILGLG 175 (375)
T ss_dssp --------EEEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEE-EEEEEEECGGGTT-HH--HHSCCCEEEECS
T ss_pred --------CCcEEEEEeCCCe-EEEEEEEEEEEEcCce--------ECc-EEEEEEecccccc-cc--ccCCCceEEeCC
Confidence 3579999999999 8999999999998643 556 9999998 44 22 134679999999
Q ss_pred CCCC------chHHHHHhcCCCC-ceeEEeecCCCCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEE
Q 010981 232 QGDL------SVISQLASRGITP-RVFSHCLKGQGNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQL 300 (496)
Q Consensus 232 ~~~~------s~~~~l~~~g~i~-~~FS~~l~~~~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~ 300 (496)
++.. +++++|++||+|+ ++||+||.+.+..+|.|+|||+|+ +++.|+|+. ...+|.|.++ |+|+++.
T Consensus 176 ~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~-i~v~g~~ 253 (375)
T 1miq_A 176 WKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLN-HDLYWQIDLD-VHFGKQT 253 (375)
T ss_dssp SCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBS-SSSSSEEEEE-EEETTEE
T ss_pred CCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecC-CCceEEEEEE-EEECCEE
Confidence 9865 4889999999996 899999998755689999999994 689999997 5689999999 9999987
Q ss_pred eecCcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcE
Q 010981 301 LSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGAS 380 (496)
Q Consensus 301 ~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~ 380 (496)
+ .+..+||||||+++++|++++++|.+++.+... ...+.|.++|.. ..+|+|+|+| +|.+
T Consensus 254 ~----------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~--------~~~g~~~~~C~~-~~~P~i~f~f-~g~~ 313 (375)
T 1miq_A 254 M----------EKANVIVDSGTTTITAPSEFLNKFFANLNVIKV--------PFLPFYVTTCDN-KEMPTLEFKS-ANNT 313 (375)
T ss_dssp E----------EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEC--------TTSSCEEEETTC-TTCCCEEEEC-SSCE
T ss_pred c----------ccceEEecCCCccEEcCHHHHHHHHHHhCCccc--------CCCCeEEEECCC-CCCCcEEEEE-CCEE
Confidence 6 135699999999999999999999999976421 234458899987 7899999999 8899
Q ss_pred EEeCCCceEEEeeeeCCceEEEEEEEecC--CCceeeCceEEeeEEEEEECCCCEEEEEeCC
Q 010981 381 MVLKPEEYLIHLGFYDGAAMWCIGFEKSP--GGVSILGDLVLKDKIFVYDLARQRVGWANYD 440 (496)
Q Consensus 381 ~~i~p~~y~~~~~~~~~~~~~cl~i~~~~--~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~ 440 (496)
++|+|++|+++... .+...|.++|+..+ ...||||++|||++|+|||++++|||||+++
T Consensus 314 ~~l~~~~yi~~~~~-~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 314 YTLEPEYYMNPILE-VDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EEECGGGSEEESSS-SSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEECHHHhEeeccC-CCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 99999999998532 23456777999875 3689999999999999999999999999975
No 21
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=5.2e-56 Score=442.87 Aligned_cols=300 Identities=25% Similarity=0.407 Sum_probs=248.9
Q ss_pred eeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCCCCC
Q 010981 81 WLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQCP 160 (496)
Q Consensus 81 ~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~~c~ 160 (496)
..|+++|+||||+|+|.|+|||||+++||+|..|..|.. ..+.|||++|+|++.++
T Consensus 15 ~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~------~~~~y~~~~SsT~~~~~------------------ 70 (329)
T 1oew_A 15 DAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV------XQTIYTPSKSTTAKLLS------------------ 70 (329)
T ss_dssp CCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-------CCCBCGGGCTTCEEEE------------------
T ss_pred CEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc------ccCccCCccCccceecC------------------
Confidence 499999999999999999999999999999999987753 13799999999998653
Q ss_pred CCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC-----
Q 010981 161 SGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL----- 235 (496)
Q Consensus 161 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~----- 235 (496)
.|.|.++|++|+.++|.+++|+|+|++.. ..++.|||+...++.+. .....+||||||++..
T Consensus 71 ----~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~~~ 137 (329)
T 1oew_A 71 ----GATWSISYGDGSSSSGDVYTDTVSVGGLT--------VTGQAVESAKKVSSSFT-EDSTIDGLLGLAFSTLNTVSP 137 (329)
T ss_dssp ----EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH-HCTTCCEEEECSCGGGCCCBS
T ss_pred ----CCeEEEEeCCCCcEEEEEEEEEEEECCEE--------EeeeEEEEEEecCcccc-ccCCCceEEEeccccccccCc
Confidence 47899999999988999999999998643 56799999998765432 1246799999999754
Q ss_pred ----chHHHHHhcCCCCceeEEeecCCCCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEEeecCccc
Q 010981 236 ----SVISQLASRGITPRVFSHCLKGQGNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSA 307 (496)
Q Consensus 236 ----s~~~~l~~~g~i~~~FS~~l~~~~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~~~~~ 307 (496)
+++++|+++ +-+++||+||.+. .+|.|+||++|+ +++.|+|+.+.+.+|.|++++|+|+++.+.
T Consensus 138 ~~~~~~~~~l~~~-i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~----- 209 (329)
T 1oew_A 138 TQQKTFFDNAKAS-LDSPVFTADLGYH--APGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK----- 209 (329)
T ss_dssp SCCCCHHHHHTTT-SSSSEEEEECCSS--SCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE-----
T ss_pred CCCCCHHHHHHHh-ccCcEEEEEccCC--CCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc-----
Confidence 378899887 3359999999863 589999999994 789999998667899999999999987553
Q ss_pred ccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEeCCCc
Q 010981 308 FAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEE 387 (496)
Q Consensus 308 ~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i~p~~ 387 (496)
..+..+||||||+++++|++++++|++++.++. +....+.|.++|. ..+|+|+|+| ||.+++|++++
T Consensus 210 ---~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~-------~~~~~g~~~~~C~--~~~P~i~f~f-gg~~~~ip~~~ 276 (329)
T 1oew_A 210 ---STSIDGIADTGTTLLYLPATVVSAYWAQVSGAK-------SSSSVGGYVFPCS--ATLPSFTFGV-GSARIVIPGDY 276 (329)
T ss_dssp ---EEEEEEEECTTCCSEEECHHHHHHHHTTSTTCE-------EETTTTEEEEETT--CCCCCEEEEE-TTEEEEECHHH
T ss_pred ---CCCceEEEeCCCCCEECCHHHHHHHHHhCCCcE-------EcCCCCEEEEECC--CCCCcEEEEE-CCEEEEECHHH
Confidence 123579999999999999999999998874332 1223456889998 5789999999 89999999999
Q ss_pred eEEEeeeeCCceEEEEEEEecC-CCceeeCceEEeeEEEEEEC-CCCEEEEEeC
Q 010981 388 YLIHLGFYDGAAMWCIGFEKSP-GGVSILGDLVLKDKIFVYDL-ARQRVGWANY 439 (496)
Q Consensus 388 y~~~~~~~~~~~~~cl~i~~~~-~~~~iLG~~fl~~~y~VfD~-~~~~IGfa~~ 439 (496)
|+++... ++...|.++|+..+ ...||||++|||++|+|||+ +++|||||+.
T Consensus 277 ~~~~~~~-~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 277 IDFGPIS-TGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp HEEEESS-TTCSEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred eeeeecC-CCCCeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 9986421 23456777788765 56899999999999999999 9999999974
No 22
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.4e-55 Score=458.39 Aligned_cols=313 Identities=27% Similarity=0.434 Sum_probs=254.3
Q ss_pred CcceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCC---CCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCC
Q 010981 78 DSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCS---NCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQT 154 (496)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~---~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~ 154 (496)
+.+..|+++|+||||||+|.|+|||||+++||+|..|. .|..+ +.|||++|+|++
T Consensus 49 ~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~-------~~y~~~~SsT~~--------------- 106 (478)
T 1qdm_A 49 YMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLH-------SRYKAGASSTYK--------------- 106 (478)
T ss_dssp GGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGS-------CCBCGGGCTTCB---------------
T ss_pred ccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCC-------CCCCcccCCCee---------------
Confidence 34559999999999999999999999999999999996 57765 789999999996
Q ss_pred CCCCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCC
Q 010981 155 TATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGD 234 (496)
Q Consensus 155 ~~~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~ 234 (496)
..++.|.+.|++|+ ++|.+++|+|+|++.. ..++.|||+..+.+.. +....++||||||++.
T Consensus 107 --------~~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~~~Fg~a~~~~~~~-f~~~~~dGIlGLg~~~ 168 (478)
T 1qdm_A 107 --------KNGKPAAIQYGTGS-IAGYFSEDSVTVGDLV--------VKDQEFIEATKEPGIT-FLVAKFDGILGLGFKE 168 (478)
T ss_dssp --------CCCCEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCBSH-HHHCSSSEEEECSCGG
T ss_pred --------eCCcEEEEEcCCCC-eEEEEEEEEEEECCeE--------ECCEEEEEEEecCCcc-cccccccceecccccc
Confidence 34689999999998 8999999999998643 5679999999876531 1134679999999987
Q ss_pred Cc------hHHHHHhcCCCC-ceeEEeecCCC--CccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEEe
Q 010981 235 LS------VISQLASRGITP-RVFSHCLKGQG--NGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQLL 301 (496)
Q Consensus 235 ~s------~~~~l~~~g~i~-~~FS~~l~~~~--~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~ 301 (496)
.+ ++.+|++||+|+ ++||+||++.. ..+|.|+||++|+ +++.|+|+. .+.+|.|++++|.|+++.+
T Consensus 169 ~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~-~~~~w~v~l~~i~v~g~~~ 247 (478)
T 1qdm_A 169 ISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVT-QKGYWQFDMGDVLVGGKST 247 (478)
T ss_dssp GCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEE-EETTEEEEECCEEETTEEC
T ss_pred cccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEecc-CCCeEEEEEeEEEECCEEE
Confidence 65 678999999996 89999998752 3589999999995 579999997 5689999999999999887
Q ss_pred ecCcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHh----------------------ccCc------------
Q 010981 302 SIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATV----------------------SQSV------------ 347 (496)
Q Consensus 302 ~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~----------------------~~~~------------ 347 (496)
.+. ..+..+||||||+++++|++++++|.++|.+.. .+..
T Consensus 248 ~~~------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~ 321 (478)
T 1qdm_A 248 GFC------AGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCT 321 (478)
T ss_dssp STT------TTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC-
T ss_pred eec------CCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccc
Confidence 542 235679999999999999999999999886421 0000
Q ss_pred ---C--------C--------------------------------------------------CCCCCCceEEeeCCccc
Q 010981 348 ---T--------P--------------------------------------------------TMSKGKQCYLVSNSVSE 366 (496)
Q Consensus 348 ---~--------~--------------------------------------------------~~~~~~~~y~~~c~~~~ 366 (496)
. . ......+-|.++|+...
T Consensus 322 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~ 401 (478)
T 1qdm_A 322 FDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLG 401 (478)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGT
T ss_pred cCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeeccccc
Confidence 0 0 00112345889999888
Q ss_pred cCCeEEEEecCCcEEEeCCCceEEEeeeeCCceEEEEEEEecC-----CCceeeCceEEeeEEEEEECCCCEEEEEeC
Q 010981 367 IFPQVSLNFEGGASMVLKPEEYLIHLGFYDGAAMWCIGFEKSP-----GGVSILGDLVLKDKIFVYDLARQRVGWANY 439 (496)
Q Consensus 367 ~~P~i~f~f~gg~~~~i~p~~y~~~~~~~~~~~~~cl~i~~~~-----~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~ 439 (496)
.+|+|+|+| ||+.|+|+|++|+++... .+...|..+|+..+ ...||||+.|||++|+|||++++|||||++
T Consensus 402 ~lP~i~f~~-gg~~~~l~p~~yi~~~~~-~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 402 SMPDIEFTI-GGKKFALKPEEYILKVGE-GAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKA 477 (478)
T ss_dssp TCCCEEEEE-TTEEEEECHHHHEEECSC-GGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ccccEEEEE-CCEEEEEChHHhEEEccC-CCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeC
Confidence 899999999 899999999999998532 12345667788643 467999999999999999999999999986
No 23
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=3.9e-55 Score=436.59 Aligned_cols=295 Identities=16% Similarity=0.247 Sum_probs=251.3
Q ss_pred ceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCC--CC--CCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCC
Q 010981 80 YWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCS--NC--PQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTT 155 (496)
Q Consensus 80 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~--~C--~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~ 155 (496)
+..|+++|+|| +|+|.|+|||||+++||+|..|. .| ..+ +.|||++| |++.
T Consensus 16 ~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~-------~~y~~~~S-T~~~--------------- 70 (330)
T 1yg9_A 16 NTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNL-------QKYEKLKP-KYIS--------------- 70 (330)
T ss_dssp CTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTC-------CCCCCSSC-EEEE---------------
T ss_pred CCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCccccc-------CccCCCCC-ceEE---------------
Confidence 44899999999 89999999999999999999997 58 555 79999999 9964
Q ss_pred CCCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC
Q 010981 156 ATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL 235 (496)
Q Consensus 156 ~~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~ 235 (496)
.++.|.+.|++|+ +.|.+++|+|+|++.. ..++.|||+......|. ...++||||||++..
T Consensus 71 --------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------~~~~~fg~~~~~~~~f~--~~~~~GilGLg~~~~ 131 (330)
T 1yg9_A 71 --------DGNVQVKFFDTGS-AVGRGIEDSLTISQLT--------TSQQDIVLADELSQEVC--ILSADVVVGIAAPGC 131 (330)
T ss_dssp --------EEEEEEEETTTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEECTHHH--HTTCSEEEECSCTTS
T ss_pred --------CCCEEEEEECCce-EEEEEEEEEEEECCEE--------EcCeEEEEEEEcccccc--cccCceEEEcCcchh
Confidence 3578999999998 5999999999998643 56799999998733221 246799999999876
Q ss_pred c-------hHHHHHhcCCCCceeEEeecCCCC--ccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEEee
Q 010981 236 S-------VISQLASRGITPRVFSHCLKGQGN--GGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQLLS 302 (496)
Q Consensus 236 s-------~~~~l~~~g~i~~~FS~~l~~~~~--~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~ 302 (496)
+ ++++|++||+|+++||+||.+..+ .+|+|+||++|+ +++.|+|+. .+.+|.|++++|+|+++.+.
T Consensus 132 s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~ 210 (330)
T 1yg9_A 132 PNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLV-GDDSWKFRLDGVKIGDTTVA 210 (330)
T ss_dssp CCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBS-CTTSCCEECSEEEETTEEEE
T ss_pred ccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECC-CCCEEEEEeCeEEECCEEEc
Confidence 6 899999999888899999998633 389999999994 689999998 67899999999999998763
Q ss_pred cCcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceE-EeeCCccccCCeEEEEecCCcEE
Q 010981 303 IDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCY-LVSNSVSEIFPQVSLNFEGGASM 381 (496)
Q Consensus 303 ~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y-~~~c~~~~~~P~i~f~f~gg~~~ 381 (496)
..+..+||||||+++++|++++++|++++++.... .+...| .++|+....+|+|+|+| +|.++
T Consensus 211 --------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~-------~g~~~~~~~~C~~~~~~p~i~f~f-gg~~~ 274 (330)
T 1yg9_A 211 --------PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVEK-------TTTRRICKLDCSKIPSLPDVTFVI-NGRNF 274 (330)
T ss_dssp --------CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEEE-------CSSCEEEEECGGGGGGSCCEEEEE-TTEEE
T ss_pred --------CCCcEEEEecCCccccCCHHHHHHHHHHhCCcccC-------CCceEEEEEECCCccccCcEEEEE-CCEEE
Confidence 23568999999999999999999999998654211 111268 89999877899999999 89999
Q ss_pred EeCCCceEEEeeeeCCceEEEEEEEecC-CCceeeCceEEeeEEEEEECCCCEEEEEeCC
Q 010981 382 VLKPEEYLIHLGFYDGAAMWCIGFEKSP-GGVSILGDLVLKDKIFVYDLARQRVGWANYD 440 (496)
Q Consensus 382 ~i~p~~y~~~~~~~~~~~~~cl~i~~~~-~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~ 440 (496)
+|+|++|+++. ...|.++|+... ...||||++|||++|+|||++++|||||+++
T Consensus 275 ~l~~~~y~~~~-----~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 275 NISSQYYIQQN-----GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EECHHHHEEEE-----TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EECHHHhcccC-----CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 99999999975 346777898754 5679999999999999999999999999975
No 24
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=3.3e-54 Score=438.33 Aligned_cols=326 Identities=20% Similarity=0.403 Sum_probs=257.3
Q ss_pred cceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCCC
Q 010981 79 SYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQ 158 (496)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~~ 158 (496)
.+.+|+++|+|||| |+|||||+++||+|..| .+++.++|+++.|.....+....
T Consensus 12 ~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~---------------------~~~~~~~C~s~~C~~~~~~~~~s 65 (381)
T 1t6e_X 12 ATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGG---------------------QPPAEIPCSSPTCLLANAYPAPG 65 (381)
T ss_dssp TTCCEEEEEETTEE-----EEEETTCCCEEECCCTT---------------------CCCCCCBTTSHHHHHHHSSCCTT
T ss_pred CCcEEEEEEeCCCE-----EEEECCCCceEEeCCCC---------------------CCCCccCCCCchhccccCCCCCC
Confidence 34599999999998 99999999999998753 13567789888887654444446
Q ss_pred CCCC-------CCCC-eeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeec
Q 010981 159 CPSG-------SNQC-SYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGF 230 (496)
Q Consensus 159 c~~~-------~~~~-~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGL 230 (496)
|+.. +..| .|.++|++|+.++|.+++|+|+|++..++..+.+...++.|||+..+..... ...+||||||
T Consensus 66 c~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~--~~~~dGIlGL 143 (381)
T 1t6e_X 66 CPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL--PRGSTGVAGL 143 (381)
T ss_dssp CCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS--CTTEEEEEEC
T ss_pred CCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC--CCCCceEEEe
Confidence 6642 2456 5999999999779999999999997644333333333457899987632111 3578999999
Q ss_pred CCCCCchHHHHHhcCCCCceeEEeecCCCCccceEEeCCCCC------CCeEEeeCCCC--CCceeEEEeEEEEccEEee
Q 010981 231 GQGDLSVISQLASRGITPRVFSHCLKGQGNGGGILVLGEILE------PSIVYSPLVPS--KPHYNLNLHGITVNGQLLS 302 (496)
Q Consensus 231 g~~~~s~~~~l~~~g~i~~~FS~~l~~~~~~~G~l~~Gg~d~------~~l~~~pl~~~--~~~w~v~l~~i~v~~~~~~ 302 (496)
|++..+++.||.++++++++||+||.+. .+|+|+||++|. +++.|+|++.+ .++|.|+|++|+|+++.+.
T Consensus 144 g~~~~s~~~ql~~~~~~~~~FS~~L~~~--~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~ 221 (381)
T 1t6e_X 144 ANSGLALPAQVASAQKVANRFLLCLPTG--GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVP 221 (381)
T ss_dssp SSSTTSHHHHHHHHHTCCSEEEEECCSS--SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECC
T ss_pred CCCcchhHHHHhhhcccCceEEEEeCCC--CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEec
Confidence 9999999999999997789999999875 689999999874 68999999854 3578899999999999987
Q ss_pred cCcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhcc-------CcC--CCCCCCCceEEeeCCcc----ccCC
Q 010981 303 IDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQ-------SVT--PTMSKGKQCYLVSNSVS----EIFP 369 (496)
Q Consensus 303 ~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~-------~~~--~~~~~~~~~y~~~c~~~----~~~P 369 (496)
++...+. ...+||||||++++||+++|++|.+++.+++.. ..+ ........||.+++... ..+|
T Consensus 222 ~~~~~~~---~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P 298 (381)
T 1t6e_X 222 VPEGALA---TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVP 298 (381)
T ss_dssp CCTTCSC---TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCC
T ss_pred CCHHHcc---CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCC
Confidence 6655442 457999999999999999999999999987641 111 11123468998876431 3789
Q ss_pred eEEEEecCCcEEEeCCCceEEEeeeeCCceEEEEEEEecCC--------CceeeCceEEeeEEEEEECCCCEEEEEeCCC
Q 010981 370 QVSLNFEGGASMVLKPEEYLIHLGFYDGAAMWCIGFEKSPG--------GVSILGDLVLKDKIFVYDLARQRVGWANYDC 441 (496)
Q Consensus 370 ~i~f~f~gg~~~~i~p~~y~~~~~~~~~~~~~cl~i~~~~~--------~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~c 441 (496)
+|+|+|+||++|+|++++|+++.. .+.+|++|+..+. ..||||+.|||++|+|||++++|||||+++.
T Consensus 299 ~i~f~f~gg~~~~l~~~~y~~~~~----~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 299 NVQLGLDGGSDWTMTGKNSMVDVK----QGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp CEEEEETTSCEEEECHHHHEEEEE----TTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCT
T ss_pred eEEEEECCCcEEEeCCCeEEEEcC----CCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEecccC
Confidence 999999667999999999999753 2457889988642 5799999999999999999999999999875
No 25
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=2.4e-55 Score=451.94 Aligned_cols=297 Identities=22% Similarity=0.365 Sum_probs=251.8
Q ss_pred cceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCC--CCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCC
Q 010981 79 SYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCS--NCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTA 156 (496)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~--~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~ 156 (496)
.+..|+++|+||||||++.|++||||+++||+|..|. .|..+ +.|||++|+|++.
T Consensus 136 ~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~-------~~ydps~SsT~~~---------------- 192 (453)
T 2bju_A 136 QNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTK-------HLYDSSKSRTYEK---------------- 192 (453)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGS-------CCBCGGGCTTCEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCC-------CcCCCccCCceeE----------------
Confidence 3459999999999999999999999999999999997 57655 8999999999974
Q ss_pred CCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeecc--CCCCCCCCCcceeeecCCCC
Q 010981 157 TQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQT--GDLSKTDKAIDGIFGFGQGD 234 (496)
Q Consensus 157 ~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~--~~~~~~~~~~~GIlGLg~~~ 234 (496)
.+|.|.+.|++|+ +.|.+++|+|+|++.. .. +.|||+...+ +.+. .....+||||||++.
T Consensus 193 -------~~~~~~i~YgdGs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~~~g~~f-~~~~~dGIlGLg~~~ 254 (453)
T 2bju_A 193 -------DGTKVEMNYVSGT-VSGFFSKDLVTVGNLS--------LP-YKFIEVIDTNGFEPTY-TASTFDGILGLGWKD 254 (453)
T ss_dssp -------EEEEEEEECSSSE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECGGGTTHH-HHSSCCEEEECSCGG
T ss_pred -------CCcEEEEEcCCCC-eEEEEEEEEEEEeCcE--------EE-EEEEEEEEecccCccc-cccCCceeEeccCCc
Confidence 3579999999999 8999999999998643 55 9999999886 5321 124679999999975
Q ss_pred C------chHHHHHhcCCCC-ceeEEeecCCCCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEEeec
Q 010981 235 L------SVISQLASRGITP-RVFSHCLKGQGNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQLLSI 303 (496)
Q Consensus 235 ~------s~~~~l~~~g~i~-~~FS~~l~~~~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~ 303 (496)
. +++++|++||+|+ ++||+||.+.+..+|.|+|||+|+ +++.|+|+. .+.+|.|+++ |+|+++ + .
T Consensus 255 ~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~-~~~~w~V~l~-I~Vgg~-~-~ 330 (453)
T 2bju_A 255 LSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLN-HDLYWQITLD-AHVGNI-M-L 330 (453)
T ss_dssp GSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEE-EETTEEEEEE-EEETTE-E-E
T ss_pred ccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecC-CCceEEEEEE-EEECcE-E-e
Confidence 4 4789999999996 899999998755689999999994 689999997 5689999999 999993 2 1
Q ss_pred CcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCc-eEEeeCCccccCCeEEEEecCCcEEE
Q 010981 304 DPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQ-CYLVSNSVSEIFPQVSLNFEGGASMV 382 (496)
Q Consensus 304 ~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~-~y~~~c~~~~~~P~i~f~f~gg~~~~ 382 (496)
.+..+||||||+++++|++++++|.+++.+.. ...+ .|.++|.. ..+|+|+|+| +|.+++
T Consensus 331 --------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~---------~~~g~~~~v~C~~-~~~P~itf~f-gg~~~~ 391 (453)
T 2bju_A 331 --------EKANCIVDSGTSAITVPTDFLNKMLQNLDVIK---------VPFLPFYVTLCNN-SKLPTFEFTS-ENGKYT 391 (453)
T ss_dssp --------EEEEEEECTTCCSEEECHHHHHHHTTTSSCEE---------CTTSSCEEEETTC-TTCCCEEEEC-SSCEEE
T ss_pred --------ccccEEEcCCCCeEecCHHHHHHHHHHhCCcc---------cCCCceEEEecCC-CCCCcEEEEE-CCEEEE
Confidence 23579999999999999999999998876531 1233 69999987 6899999999 889999
Q ss_pred eCCCceEEEeeeeCCceEEEEEEEecC--CCceeeCceEEeeEEEEEECCCCEEEEEeCC
Q 010981 383 LKPEEYLIHLGFYDGAAMWCIGFEKSP--GGVSILGDLVLKDKIFVYDLARQRVGWANYD 440 (496)
Q Consensus 383 i~p~~y~~~~~~~~~~~~~cl~i~~~~--~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~ 440 (496)
|+|++|+++... ++...|.++|+..+ .+.||||++|||++|+|||++++|||||+++
T Consensus 392 l~~~~yi~~~~~-~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 392 LEPEYYLQHIED-VGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp ECHHHHEEECTT-TSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred ECHHHhEeeccc-CCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999999998532 13456777999875 4589999999999999999999999999986
No 26
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=3.3e-54 Score=439.16 Aligned_cols=325 Identities=26% Similarity=0.388 Sum_probs=253.9
Q ss_pred ceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCCCC
Q 010981 80 YWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQC 159 (496)
Q Consensus 80 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~~c 159 (496)
+..|+++|+||||+|+|.|+|||||+++||+|..|..| .+.|||++|+|++..
T Consensus 12 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~---------~~~f~~~~SsT~~~~------------------ 64 (383)
T 2ewy_A 12 GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI---------DTYFDTERSSTYRSK------------------ 64 (383)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB---------SCCCCGGGCTTCEEE------------------
T ss_pred CCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc---------ccCcccccCccceeC------------------
Confidence 44899999999999999999999999999999888665 267999999999754
Q ss_pred CCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC----
Q 010981 160 PSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL---- 235 (496)
Q Consensus 160 ~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~---- 235 (496)
.|.|.++|++|+ ++|.+++|+|+|++... ....+.|++.....+.|. ....++||||||++..
T Consensus 65 -----~~~~~i~Yg~Gs-~~G~~~~Dtv~i~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~dGilGLg~~~~s~~~ 131 (383)
T 2ewy_A 65 -----GFDVTVKYTQGS-WTGFVGEDLVTIPKGFN------TSFLVNIATIFESENFFL-PGIKWNGILGLAYATLAKPS 131 (383)
T ss_dssp -----EEEEEEECSSCE-EEEEEEEEEEEETTTEE------EEEEEEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSSC
T ss_pred -----CceEEEEECCcE-EEEEEEEEEEEECCCcc------ceeEEEEEEEEeecceee-ccCcCceEEecCchhccccc
Confidence 478999999998 69999999999974210 112467888776655432 2356799999999754
Q ss_pred ----chHHHHHhcCCCCceeEEeecC-------CCCccceEEeCCCC----CCCeEEeeCCCCCCceeEEEeEEEEccEE
Q 010981 236 ----SVISQLASRGITPRVFSHCLKG-------QGNGGGILVLGEIL----EPSIVYSPLVPSKPHYNLNLHGITVNGQL 300 (496)
Q Consensus 236 ----s~~~~l~~~g~i~~~FS~~l~~-------~~~~~G~l~~Gg~d----~~~l~~~pl~~~~~~w~v~l~~i~v~~~~ 300 (496)
+++++|.+|+.++++||+||.+ ....+|.|+||++| ++++.|+|+. ...+|.|.+++|+|+++.
T Consensus 132 ~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~ 210 (383)
T 2ewy_A 132 SSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIK-EEWYYQIEILKLEIGGQS 210 (383)
T ss_dssp TTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECS-SBTTBBCCEEEEEETTEE
T ss_pred ccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecC-CCceEEEEEEEEEECCEE
Confidence 4788999999888899999964 23458999999998 3789999998 467999999999999999
Q ss_pred eecCcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCC-ceEEeeCCcc-----ccCCeEEEE
Q 010981 301 LSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGK-QCYLVSNSVS-----EIFPQVSLN 374 (496)
Q Consensus 301 ~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~-~~y~~~c~~~-----~~~P~i~f~ 374 (496)
+.++...+ ....+||||||++++||++++++|++++.+...... ...+. ..|.++|... ..+|+|+|+
T Consensus 211 ~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~---~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~ 284 (383)
T 2ewy_A 211 LNLDCREY---NADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPE---FSDGFWTGSQLACWTNSETPWSYFPKISIY 284 (383)
T ss_dssp CCCCTTTT---TSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSC---CCHHHHHTSEEEEECSSSCGGGGSCCEEEE
T ss_pred cccccccc---CCccEEEEcCCccccCCHHHHHHHHHHHhhhccccc---CccccccccccccccCCcccHhhCCcEEEE
Confidence 87654433 246799999999999999999999999998753210 00000 1135566533 468999999
Q ss_pred ecCC-----cEEEeCCCceEEEeeeeCCceEEE-EEEEecCCCceeeCceEEeeEEEEEECCCCEEEEEeCCCCC--Ccc
Q 010981 375 FEGG-----ASMVLKPEEYLIHLGFYDGAAMWC-IGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSL--SVN 446 (496)
Q Consensus 375 f~gg-----~~~~i~p~~y~~~~~~~~~~~~~c-l~i~~~~~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~c~~--~~~ 446 (496)
|.|+ .+++|+|++|+.+....++...|. +++.+. ...||||++|||++|+|||++++|||||+++|.. +.+
T Consensus 285 f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~ 363 (383)
T 2ewy_A 285 LRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPS-TNALVIGATVMEGFYVIFDRAQKRVGFAASPCAEIAGAA 363 (383)
T ss_dssp EECSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEECTTCBSSSCB
T ss_pred ECCCCCCceEEEEEChHHheeecccCCCCceeEEEEecCC-CCcEEEChHHhCCeeEEEECCCCeEEEEeccCCCcCCcc
Confidence 9553 379999999998753222234554 466665 4679999999999999999999999999999974 567
Q ss_pred eeeccC
Q 010981 447 VSITSG 452 (496)
Q Consensus 447 ~~~~~~ 452 (496)
++++++
T Consensus 364 i~~i~g 369 (383)
T 2ewy_A 364 VSEISG 369 (383)
T ss_dssp CEEEEE
T ss_pred eeeecC
Confidence 766654
No 27
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=8.1e-54 Score=445.24 Aligned_cols=319 Identities=24% Similarity=0.338 Sum_probs=251.9
Q ss_pred ceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCCCC
Q 010981 80 YWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQC 159 (496)
Q Consensus 80 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~~c 159 (496)
+..|+++|+||||+|+|.|+|||||+++||+|..| |..+ +.|+|++|+|++..
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~~-------~~y~~~~SsT~~~~------------------ 125 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFLH-------RYYQRQLSSTYRDL------------------ 125 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTCS-------CCCCGGGCTTCEEE------------------
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cccC-------CcccCCCCCCcccC------------------
Confidence 44899999999999999999999999999999987 5444 78999999999754
Q ss_pred CCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC----
Q 010981 160 PSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL---- 235 (496)
Q Consensus 160 ~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~---- 235 (496)
.|.|.+.|++|+ +.|.+++|+|+|++.. +....+.|+++....+.|. ....++||||||++..
T Consensus 126 -----~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~------~~~~~~~~~~~~~~~~~~~-~~~~~dGIlGLg~~~~s~~~ 192 (455)
T 3lpj_A 126 -----RKGVYVPYTQGK-WEGELGTDLVSIPHGP------NVTVRANIAAITESDKFFI-NGSNWEGILGLAYAEIARPD 192 (455)
T ss_dssp -----EEEEEEECSSCE-EEEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSSC
T ss_pred -----CccEEEEeCCeE-EEEEEEEEEEEECCCc------ceeeEEEEEEEEccCcccc-cCCCcceEEEeCcccccccc
Confidence 479999999999 5999999999997421 1122367888887766542 2357899999998643
Q ss_pred ----chHHHHHhcCCCCceeEEeecCC----------CCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEc
Q 010981 236 ----SVISQLASRGITPRVFSHCLKGQ----------GNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVN 297 (496)
Q Consensus 236 ----s~~~~l~~~g~i~~~FS~~l~~~----------~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~ 297 (496)
+++++|++|++|+++||+||.+. ...+|.|+||++|+ +++.|+|+. ...+|.|.+++|.|+
T Consensus 193 ~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~ 271 (455)
T 3lpj_A 193 DSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVEIN 271 (455)
T ss_dssp TTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEEET
T ss_pred CCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecC-CCceeEEEEeEEEEC
Confidence 58899999999989999999753 24589999999994 689999998 468999999999999
Q ss_pred cEEeecCcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccc-----cCCeEE
Q 010981 298 GQLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSE-----IFPQVS 372 (496)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~-----~~P~i~ 372 (496)
++.+.++...+ ....+||||||++++||++++++|++++.+....... ......-|.++|.... .+|+|+
T Consensus 272 g~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~--~~~~~~g~~~~C~~~~~~~~~~~P~i~ 346 (455)
T 3lpj_A 272 GQDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKF--PDGFWLGEQLVCWQAGTTPWNIFPVIS 346 (455)
T ss_dssp TEECCCCGGGG---GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCC--CHHHHTTCSCEEESTTCCCGGGSCCEE
T ss_pred CEEcccccccc---CCCeEEEECCCcceeCCHHHHHHHHHHhhhhcccccc--CcccccCcceecccccCCchhcCCcEE
Confidence 99987655433 2467999999999999999999999999998542100 0000011245665443 489999
Q ss_pred EEecCCc-----EEEeCCCceEEEeeeeCC-ceEEE-EEEEecCCCceeeCceEEeeEEEEEECCCCEEEEEeCCCCCCc
Q 010981 373 LNFEGGA-----SMVLKPEEYLIHLGFYDG-AAMWC-IGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLSV 445 (496)
Q Consensus 373 f~f~gg~-----~~~i~p~~y~~~~~~~~~-~~~~c-l~i~~~~~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~c~~~~ 445 (496)
|+|.|+. +|+|+|++|+.+....++ ...|. +++... ...||||++|||++|+|||++++|||||+++|....
T Consensus 347 f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~ 425 (455)
T 3lpj_A 347 LYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHD 425 (455)
T ss_dssp EEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCC
T ss_pred EEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEeccccccc
Confidence 9995443 599999999998643222 13455 345443 578999999999999999999999999999997643
No 28
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1.5e-53 Score=435.87 Aligned_cols=327 Identities=24% Similarity=0.375 Sum_probs=253.8
Q ss_pred ceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCCCC
Q 010981 80 YWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQC 159 (496)
Q Consensus 80 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~~c 159 (496)
+..|+++|+||||+|+|.|+|||||+++||+|..|..| ++.|||++|+|++..
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~---------~~~y~~~~SsT~~~~------------------ 72 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL---------HRYYQRQLSSTYRDL------------------ 72 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC---------SCCCCGGGCTTCEEE------------------
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc---------cCCcCcccCCCceeC------------------
Confidence 34899999999999999999999999999999887654 268999999999754
Q ss_pred CCCCCCCeeeeEeCCCCeEEEEEEEEEEEEee-ecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC---
Q 010981 160 PSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDA-ILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL--- 235 (496)
Q Consensus 160 ~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~-~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 235 (496)
.|.|.++|++|+ ++|.+++|+|+|++ ... ...+.|++.....+.|. ....++||||||++..
T Consensus 73 -----~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~g~~~-------~~~~~~~~~~~~~~~f~-~~~~~dGIlGLg~~~~s~~ 138 (395)
T 2qp8_A 73 -----RKGVYVPYTQGK-WEGELGTDLVSIPHGPNV-------TVRANIAAITESDKFFI-NGSNWEGILGLAYAEIARP 138 (395)
T ss_dssp -----EEEEEEECSSCE-EEEEEEEEEEECTTSCSC-------EEEEEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSS
T ss_pred -----CceEEEEECCcE-EEEEEEeEEEEECCCCCc-------eEEEEEEEEEccCcccc-cccCccceEEcCchhhccC
Confidence 478999999998 59999999999973 210 12366787776555432 2356799999999654
Q ss_pred -----chHHHHHhcCCCCceeEEeecCC----------CCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEE
Q 010981 236 -----SVISQLASRGITPRVFSHCLKGQ----------GNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITV 296 (496)
Q Consensus 236 -----s~~~~l~~~g~i~~~FS~~l~~~----------~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v 296 (496)
+++++|++|++++++||+||.+. ...+|.|+||++|+ +++.|+|+. ...+|.|.+++|+|
T Consensus 139 ~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v 217 (395)
T 2qp8_A 139 DDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVEI 217 (395)
T ss_dssp CTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEEE
T ss_pred CCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccC-CCceEEEEEEEEEE
Confidence 47889999999989999999753 13579999999994 689999998 46799999999999
Q ss_pred ccEEeecCcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCC-CC-C-CCCceEEeeCCccccCCeEEE
Q 010981 297 NGQLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTP-TM-S-KGKQCYLVSNSVSEIFPQVSL 373 (496)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~-~~-~-~~~~~y~~~c~~~~~~P~i~f 373 (496)
+++.+.++...+. ...+||||||++++||++++++|++++.+........ .. . ....|+..+......+|+|+|
T Consensus 218 ~g~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f 294 (395)
T 2qp8_A 218 NGQDLKMDCKEYN---YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISL 294 (395)
T ss_dssp TTEECCCCGGGGG---SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEE
T ss_pred CCEEcccCccccC---CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEE
Confidence 9999876554442 3579999999999999999999999999875321100 00 0 012333322222236899999
Q ss_pred EecCCc-----EEEeCCCceEEEeeeeC-CceEEE-EEEEecCCCceeeCceEEeeEEEEEECCCCEEEEEeCCCCC--C
Q 010981 374 NFEGGA-----SMVLKPEEYLIHLGFYD-GAAMWC-IGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSL--S 444 (496)
Q Consensus 374 ~f~gg~-----~~~i~p~~y~~~~~~~~-~~~~~c-l~i~~~~~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~c~~--~ 444 (496)
+|+|+. +++|+|++|+.+....+ +...|. ++++.. ...||||++|||++|+|||++++|||||+++|.. +
T Consensus 295 ~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~ 373 (395)
T 2qp8_A 295 YLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDE 373 (395)
T ss_dssp EEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCS
T ss_pred EEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCC-CCcEEEChHHhCCeeEEEECCCCEEEEEeccCCCCCC
Confidence 996543 79999999999854311 223564 577765 4679999999999999999999999999999985 5
Q ss_pred cceeeccC
Q 010981 445 VNVSITSG 452 (496)
Q Consensus 445 ~~~~~~~~ 452 (496)
.+++++++
T Consensus 374 ~~i~~i~g 381 (395)
T 2qp8_A 374 FRTAAVEG 381 (395)
T ss_dssp SCCCEEEE
T ss_pred CccceecC
Confidence 66655543
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.4e-53 Score=435.45 Aligned_cols=317 Identities=24% Similarity=0.341 Sum_probs=247.7
Q ss_pred eeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCCCCC
Q 010981 81 WLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQCP 160 (496)
Q Consensus 81 ~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~~c~ 160 (496)
..|+++|+||||||+|.|+|||||+++||+|..| |..+ +.|+|++|+|++..
T Consensus 28 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~~-------~~y~~~~SsT~~~~------------------- 79 (402)
T 3vf3_A 28 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFLH-------RYYQRQLSSTYRDL------------------- 79 (402)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTCS-------CCCCGGGCTTCEEE-------------------
T ss_pred CEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Cccc-------CCcCcccCcccccC-------------------
Confidence 3899999999999999999999999999999887 5444 78999999999753
Q ss_pred CCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCC------
Q 010981 161 SGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGD------ 234 (496)
Q Consensus 161 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~------ 234 (496)
.|.|.+.|++|+ +.|.+++|+|+|++... ....+.|++.....+.+. ....++||||||++.
T Consensus 80 ----~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~~------~~~~~~~~~~~~~~~~~~-~~~~~dGIlGLg~~~~s~~~~ 147 (402)
T 3vf3_A 80 ----RKGVYVPYTQGK-WEGELGTDLVSIPHGPN------VTVRANIAAITESDKFFI-NGSNWEGILGLAYAEIARPDD 147 (402)
T ss_dssp ----EEEEEEECSSCE-EEEEEEEEEEECTTSCS------CEEEEEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSSCT
T ss_pred ----CCEEEEEECcEE-EEEEEEEEEEEECCccc------cceeeeEEEEEccccccc-cCCCccceEEcCchhhcccCC
Confidence 579999999999 69999999999974110 112355788777665442 235789999999864
Q ss_pred --CchHHHHHhcCCCCceeEEeecCC----------CCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEcc
Q 010981 235 --LSVISQLASRGITPRVFSHCLKGQ----------GNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNG 298 (496)
Q Consensus 235 --~s~~~~l~~~g~i~~~FS~~l~~~----------~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~ 298 (496)
.+++++|++|++|+++||+||.+. ...+|.|+||++|+ +++.|+|+. .+.+|.|.+++|+|++
T Consensus 148 ~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~g 226 (402)
T 3vf3_A 148 SLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVEING 226 (402)
T ss_dssp TSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECS-SBTTBEECEEEEEETT
T ss_pred cCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCC-cCcEEEEEEeEEEECC
Confidence 358899999999989999999742 34589999999994 689999998 4689999999999999
Q ss_pred EEeecCcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCcc-----ccCCeEEE
Q 010981 299 QLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVS-----EIFPQVSL 373 (496)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~-----~~~P~i~f 373 (496)
+.+.++...+ ....+||||||++++||++++++|++++.+....... ......-|.++|... ..+|+|+|
T Consensus 227 ~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~--~~~~~~~~~~~C~~~~~~~~~~~P~i~f 301 (402)
T 3vf3_A 227 QDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKF--PDGFWLGEQLVCWQAGTTPWNIFPVISL 301 (402)
T ss_dssp EECCCCGGGG---GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCC--CTTGGGTCSCEEEETTCCCGGGSCCEEE
T ss_pred EEeccccccc---CCCeEEEECCCCcccCCHHHHHHHHHHHhhhcccccc--CccccccccccccccccchHhhCCceEE
Confidence 9987655433 2467999999999999999999999999998532100 000001123455533 37999999
Q ss_pred EecCCc-----EEEeCCCceEEEeeeeCCc-eEEE-EEEEecCCCceeeCceEEeeEEEEEECCCCEEEEEeCCCCCC
Q 010981 374 NFEGGA-----SMVLKPEEYLIHLGFYDGA-AMWC-IGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLS 444 (496)
Q Consensus 374 ~f~gg~-----~~~i~p~~y~~~~~~~~~~-~~~c-l~i~~~~~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~c~~~ 444 (496)
+|.|+. +++|+|++|+.+....++. ..|. +++... ...||||++|||++|+|||++++|||||+++|+..
T Consensus 302 ~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 378 (402)
T 3vf3_A 302 YLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH 378 (402)
T ss_dssp EEECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEE-SSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCB
T ss_pred EEecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEecccCcc
Confidence 995443 5999999999986431112 3555 355544 57799999999999999999999999999999954
No 30
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=8.1e-54 Score=429.25 Aligned_cols=290 Identities=24% Similarity=0.387 Sum_probs=244.1
Q ss_pred eEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCCCCCC
Q 010981 82 LYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQCPS 161 (496)
Q Consensus 82 ~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~~c~~ 161 (496)
.|+++|+||||+|++.|+|||||+++||+|. +.|+|++|+++
T Consensus 13 ~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~---------------~~y~~s~Ss~~----------------------- 54 (340)
T 1wkr_A 13 DYVVNVGVGSPATTYSLLVDTGSSNTWLGAD---------------KSYVKTSTSSA----------------------- 54 (340)
T ss_dssp CEEEEEEETTTTEEEEEEEETTCCCCEECSS---------------SCCCCCTTCEE-----------------------
T ss_pred EEEEEEEECCCCcEEEEEEeCCChhheecCC---------------CccCCcCCccc-----------------------
Confidence 8999999999999999999999999999864 57999888765
Q ss_pred CCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC------
Q 010981 162 GSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL------ 235 (496)
Q Consensus 162 ~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~------ 235 (496)
..|.|.++|++|+ ++|.+++|+|+|++.. +.++.|||+....+ | ..++||||||++..
T Consensus 55 --~~~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~~--------v~~~~fg~~~~~~~-~----~~~~GilGLg~~~~s~~~~~ 118 (340)
T 1wkr_A 55 --TSDKVSVTYGSGS-FSGTEYTDTVTLGSLT--------IPKQSIGVASRDSG-F----DGVDGILGVGPVDLTVGTLS 118 (340)
T ss_dssp --EEEEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEEES-C----TTCSEEEECSCGGGGTTSEE
T ss_pred --cCceEEEEECCcE-EEEEEEEEEEEECCEE--------EcceEEEEEEccCC-C----cCCCcEEECCcccccccccc
Confidence 3589999999998 8999999999998643 56799999999765 2 25799999998654
Q ss_pred --------chHHHHHhcCCCC-ceeEEeecCC---CCccceEEeCCCCC----CCeEEeeCCCC---CCceeEEEeEEEE
Q 010981 236 --------SVISQLASRGITP-RVFSHCLKGQ---GNGGGILVLGEILE----PSIVYSPLVPS---KPHYNLNLHGITV 296 (496)
Q Consensus 236 --------s~~~~l~~~g~i~-~~FS~~l~~~---~~~~G~l~~Gg~d~----~~l~~~pl~~~---~~~w~v~l~~i~v 296 (496)
+++++|++||+|+ ++||+||.+. ...+|.|+||++|+ +++.|+|+... ..+|.|. .+|+|
T Consensus 119 ~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v 197 (340)
T 1wkr_A 119 PHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRY 197 (340)
T ss_dssp SCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEE
T ss_pred ccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEE
Confidence 4689999999996 8999999864 23579999999983 78999999864 5689999 99999
Q ss_pred cc-EEeecCcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEe
Q 010981 297 NG-QLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNF 375 (496)
Q Consensus 297 ~~-~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f 375 (496)
++ +.+.. +..+||||||++++||++++++|.+++.+.. ....++|.++|+....+|+|+|+|
T Consensus 198 ~~~~~l~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~--------~~~~g~~~~~C~~~~~~p~i~f~f 260 (340)
T 1wkr_A 198 GSSTSILS---------STAGIVDTGTTLTLIASDAFAKYKKATGAVA--------DNNTGLLRLTTAQYANLQSLFFTI 260 (340)
T ss_dssp TTTEEEEE---------EEEEEECTTBCSEEECHHHHHHHHHHHTCEE--------CTTTSSEEECHHHHHTCCCEEEEE
T ss_pred CCCeEccC---------CCeEEEeCCcccccCCHHHHHHHHHhhCCEE--------cCCCCeEEeeccccccCCcEEEEE
Confidence 98 77631 2469999999999999999999988886543 234567999998777899999999
Q ss_pred cCCcEEEeCCCceEEEeeee---C-CceEEEEEEEecC-----CCceeeCceEEeeEEEEEECCCCEEEEEeCCCCCC
Q 010981 376 EGGASMVLKPEEYLIHLGFY---D-GAAMWCIGFEKSP-----GGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLS 444 (496)
Q Consensus 376 ~gg~~~~i~p~~y~~~~~~~---~-~~~~~cl~i~~~~-----~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~c~~~ 444 (496)
+|.+++|+|++|+++.... + ....||+++.+.+ ...||||++|||++|+|||++++|||||+++|...
T Consensus 261 -~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 337 (340)
T 1wkr_A 261 -GGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTA 337 (340)
T ss_dssp -TTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTC
T ss_pred -CCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCC
Confidence 8899999999999864321 1 1357888887643 24699999999999999999999999999999853
No 31
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=2e-53 Score=423.51 Aligned_cols=298 Identities=24% Similarity=0.376 Sum_probs=245.6
Q ss_pred eeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCCCCC
Q 010981 81 WLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQCP 160 (496)
Q Consensus 81 ~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~~c~ 160 (496)
..|+++|+|| +|+|.|+|||||+++||+|..|..|... .++.|+|++|+ ++
T Consensus 14 ~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~-----~~~~y~~~~Ss-~~--------------------- 64 (325)
T 1ibq_A 14 EEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQT-----GHDLYTPSSSA-TK--------------------- 64 (325)
T ss_dssp SCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHT-----TSCCCBCCSSC-EE---------------------
T ss_pred CEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccC-----CCCCCCchhcC-Cc---------------------
Confidence 4999999999 8999999999999999999999875322 13789999998 53
Q ss_pred CCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCCc----
Q 010981 161 SGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLS---- 236 (496)
Q Consensus 161 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~s---- 236 (496)
.+.|.|.++|++|+.+.|.+++|+|+|++.. ..++.|||+...++.+. .....+||||||++..+
T Consensus 65 --~~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~~p 133 (325)
T 1ibq_A 65 --LSGYSWDISYGDGSSASGDVYRDTVTVGGVT--------TNKQAVEAASKISSEFV-QDTANDGLLGLAFSSINTVQP 133 (325)
T ss_dssp --CTTCBEEEECSSSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH-TSTTCCEEEECSCGGGCCCBS
T ss_pred --cCCCEEEEEeCCCCEEEEEEEEeEEEECCEE--------EcceEEEEEEecCcccc-ccCCCceEEEeCcccccccCc
Confidence 2468999999999988999999999998643 56799999998765432 12467999999997543
Q ss_pred -----hHHHHHhcCCCCceeEEeecCCCCccceEEeCCCC----CCCeEEeeCCCCCCceeEEEeEEEEccEEeecCccc
Q 010981 237 -----VISQLASRGITPRVFSHCLKGQGNGGGILVLGEIL----EPSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSA 307 (496)
Q Consensus 237 -----~~~~l~~~g~i~~~FS~~l~~~~~~~G~l~~Gg~d----~~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~~~~~ 307 (496)
++++|+++ +.+++||+||.++ .+|.|+||++| ++++.|+|+.+.+.+|.|++++|+|+++.+.
T Consensus 134 ~~~~~~~~~l~~~-i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~----- 205 (325)
T 1ibq_A 134 KAQTTFFDTVKSQ-LDSPLFAVQLKHD--APGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS----- 205 (325)
T ss_dssp SCCCCHHHHHGGG-SSSSEEEEEEETT--EEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB-----
T ss_pred CCCCCHHHHHHHh-cCCcEEEEEecCC--CCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeecc-----
Confidence 68999987 3359999999874 58999999998 4789999998667899999999999987552
Q ss_pred ccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEeCCCc
Q 010981 308 FAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEE 387 (496)
Q Consensus 308 ~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i~p~~ 387 (496)
..+..+||||||+++++|++++++|++++.++. .....+.|.++|. ..+|+|+|+| +|.+++|++++
T Consensus 206 ---~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~-------~~~~~g~~~~~C~--~~~P~i~f~f-gg~~~~i~~~~ 272 (325)
T 1ibq_A 206 ---SSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQ-------ESYEAGGYVFSCS--TDLPDFTVVI-GDYKAVVPGKY 272 (325)
T ss_dssp ---SCCEEEEECTTCCSEEECHHHHHHHHTTSTTCB-------CCSSSSSCEEETT--CCCCCEEEEE-TTEEEEECHHH
T ss_pred ---CCCceEEEeCCCCcEeCCHHHHHHHHHhCCCce-------EcCcCCeEEEEcC--CCCCcEEEEE-CCEEEEECHHH
Confidence 234679999999999999999999999884332 1123345888998 5789999999 89999999999
Q ss_pred eEEEeeeeCCceEEEEEEEecC-CCceeeCceEEeeEEEEEECCCCEEEEEeCC
Q 010981 388 YLIHLGFYDGAAMWCIGFEKSP-GGVSILGDLVLKDKIFVYDLARQRVGWANYD 440 (496)
Q Consensus 388 y~~~~~~~~~~~~~cl~i~~~~-~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~ 440 (496)
|+++... ++...|.++|+..+ .+.||||++|||++|+|||++++|||||++.
T Consensus 273 ~~~~~~~-~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 273 INYAPVS-TGSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp HEEEESS-TTCSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred hcccccC-CCCCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 9986421 23356777788765 5689999999999999999999999999863
No 32
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=3e-53 Score=421.67 Aligned_cols=295 Identities=23% Similarity=0.397 Sum_probs=243.7
Q ss_pred eeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCCCCC
Q 010981 81 WLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQCP 160 (496)
Q Consensus 81 ~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~~c~ 160 (496)
..|+++|+|| ||+|.|+|||||+++||+|..|..|... .++.|+|++|+ ++
T Consensus 15 ~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~-----~~~~y~~~~Ss-~~--------------------- 65 (323)
T 1izd_A 15 EEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERS-----GHDYYTPGSSA-QK--------------------- 65 (323)
T ss_dssp CCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT-----TCCCBCCCTTC-EE---------------------
T ss_pred CEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccccc-----CCCCCCccccC-Cc---------------------
Confidence 4999999999 8999999999999999999999875322 13789999998 53
Q ss_pred CCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCCc----
Q 010981 161 SGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLS---- 236 (496)
Q Consensus 161 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~s---- 236 (496)
.+.|.|.++|++|+.+.|.+++|+|+|++.. ..++.|||++..++.+. .....+||||||++..+
T Consensus 66 --~~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~~p 134 (323)
T 1izd_A 66 --IDGATWSISYGDGSSASGDVYKDKVTVGGVS--------YDSQAVESAEKVSSEFT-QDTANDGLLGLAFSSINTVQP 134 (323)
T ss_dssp --EEEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH-HCTTCCEEEECSCGGGCCCBS
T ss_pred --cCCCeEEEEcCCCCeEEEEEEEEEEEECCEE--------ECceEEEEEEecccccc-ccCCCceEEecCcccccccCC
Confidence 2458999999999988999999999998643 56799999998765432 12467999999997543
Q ss_pred -----hHHHHHhcCCCCceeEEeecCCCCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEEeecCccc
Q 010981 237 -----VISQLASRGITPRVFSHCLKGQGNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSA 307 (496)
Q Consensus 237 -----~~~~l~~~g~i~~~FS~~l~~~~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~~~~~ 307 (496)
++++|++| +.+++||+||.++ .+|+|+||++|+ +++.|+|+.+.+.+|.|++++|+|++ .+.
T Consensus 135 ~~~~~~~~~l~~~-i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~----- 205 (323)
T 1izd_A 135 TPQKTFFDNVKSS-LSEPIFAVALKHN--APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSS----- 205 (323)
T ss_dssp SCCCCHHHHHGGG-SSSSEEEEECCTT--SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEE-----
T ss_pred CCCCCHHHHHHHh-ccCcEEEEEccCC--CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-ccc-----
Confidence 68999987 3359999999864 579999999995 57999999866789999999999999 442
Q ss_pred ccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEeCCCc
Q 010981 308 FAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEE 387 (496)
Q Consensus 308 ~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i~p~~ 387 (496)
..+..+||||||+++++|++++++|.+++.++. .....+.|.++|. ..+|+|+|+| ||.+++|++++
T Consensus 206 ---~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~-------~~~~~g~~~~~C~--~~~P~i~f~f-gg~~~~i~~~~ 272 (323)
T 1izd_A 206 ---SDSITGIADTGTTLLLLDDSIVDAYYEQVNGAS-------YDSSQGGYVFPSS--ASLPDFSVTI-GDYTATVPGEY 272 (323)
T ss_dssp ---CCCEEEEECTTCCSEEECHHHHHHHHTTSTTCE-------EETTTTEEEEETT--CCCCCEEEEE-TTEEEEECHHH
T ss_pred ---CCCceEEEeCCCcceeCCHHHHHHHHHhCCCcE-------EcCcCCEEEEECC--CCCceEEEEE-CCEEEecCHHH
Confidence 234679999999999999999999998885322 1223456889998 5789999999 89999999999
Q ss_pred eEEEeeeeCCceEEEEEEEecC-CCceeeCceEEeeEEEEEECCCCEEEEEeCC
Q 010981 388 YLIHLGFYDGAAMWCIGFEKSP-GGVSILGDLVLKDKIFVYDLARQRVGWANYD 440 (496)
Q Consensus 388 y~~~~~~~~~~~~~cl~i~~~~-~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~ 440 (496)
|+++.. +...|.++|+..+ .+.||||++|||++|+|||++++|||||++.
T Consensus 273 ~~~~~~---~~~~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 273 ISFADV---GNGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp HEEEEC---STTEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eEEecC---CCCeEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 998742 3456767798865 5689999999999999999999999999863
No 33
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.2e-53 Score=424.87 Aligned_cols=295 Identities=22% Similarity=0.362 Sum_probs=243.9
Q ss_pred eeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCCCCC
Q 010981 81 WLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQCP 160 (496)
Q Consensus 81 ~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~~c~ 160 (496)
..|+++|+|| +|+|.|+|||||+++||+|..|..|... .++.|||++|+ ++
T Consensus 15 ~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~-----~~~~y~~~~Ss-~~--------------------- 65 (323)
T 1bxo_A 15 EEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQS-----GHSVYNPSATG-KE--------------------- 65 (323)
T ss_dssp SCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT-----TSCCBCHHHHC-EE---------------------
T ss_pred CEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhcc-----CCCCCCcccCC-cc---------------------
Confidence 4999999999 8999999999999999999999875322 13799999888 53
Q ss_pred CCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC-----
Q 010981 161 SGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL----- 235 (496)
Q Consensus 161 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~----- 235 (496)
.+.|.|+++|++|+.++|.+++|+|+|++.. ..++.|||+...++.+. .....+||||||++..
T Consensus 66 --~~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~~~ 134 (323)
T 1bxo_A 66 --LSGYTWSISYGDGSSASGNVFTDSVTVGGVT--------AHGQAVQAAQQISAQFQ-QDTNNDGLLGLAFSSINTVQP 134 (323)
T ss_dssp --EEEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH-TCTTCSEEEECSCGGGCCCBS
T ss_pred --cCCCeEEEEeCCCCeEEEEEEEEEEEECCEE--------ECcEEEEEEEecCcccc-cCCCCceEEEeCccccccccc
Confidence 2458999999999988999999999998643 56799999998765432 1246799999999643
Q ss_pred ----chHHHHHhcCCCCceeEEeecCCCCccceEEeCCCC----CCCeEEeeCCCCCCceeEEEeEEEEccEEeecCccc
Q 010981 236 ----SVISQLASRGITPRVFSHCLKGQGNGGGILVLGEIL----EPSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSA 307 (496)
Q Consensus 236 ----s~~~~l~~~g~i~~~FS~~l~~~~~~~G~l~~Gg~d----~~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~~~~~ 307 (496)
+++++|+++ +.+++||+||.++ .+|.|+||++| ++++.|+|+.+.+.+|.|++++|+|++ ..
T Consensus 135 ~~~~~~~~~l~~~-i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~------ 204 (323)
T 1bxo_A 135 QSQTTFFDTVKSS-LAQPLFAVALKHQ--QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-QS------ 204 (323)
T ss_dssp SCCCCHHHHHGGG-BSSSEEEEECCSS--SCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-EE------
T ss_pred CCCCCHHHHHHHh-cCCcEEEEEEeCC--CCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC-cc------
Confidence 378999987 3359999999863 57999999999 478999999866789999999999998 21
Q ss_pred ccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEeCCCc
Q 010981 308 FAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEE 387 (496)
Q Consensus 308 ~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i~p~~ 387 (496)
..+..+||||||+++++|++++++|++++.++.. ....+.|.++|. ..+|+|+|+| ||.+++|++++
T Consensus 205 ---~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~-------~~~~g~~~~~C~--~~~P~i~f~f-gg~~~~l~~~~ 271 (323)
T 1bxo_A 205 ---GDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ-------DSNAGGYVFDCS--TNLPDFSVSI-SGYTATVPGSL 271 (323)
T ss_dssp ---EEEEEEEECTTCSSEEECHHHHHHHHTTSTTCEE-------ETTTTEEEECTT--CCCCCEEEEE-TTEEEEECHHH
T ss_pred ---CCCceEEEeCCCCceeCCHHHHHHHHHhCCCceE-------cCcCCEEEEECC--CCCceEEEEE-CCEEEEECHHH
Confidence 1235799999999999999999999998843321 123456889998 5789999999 89999999999
Q ss_pred eEEEeeeeCCceEEEEEEEecC-CCceeeCceEEeeEEEEEECCCCEEEEEeCC
Q 010981 388 YLIHLGFYDGAAMWCIGFEKSP-GGVSILGDLVLKDKIFVYDLARQRVGWANYD 440 (496)
Q Consensus 388 y~~~~~~~~~~~~~cl~i~~~~-~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~ 440 (496)
|+++.. ++...|.++|+..+ .+.||||++|||++|+|||++++|||||++.
T Consensus 272 ~~~~~~--~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 272 INYGPS--GDGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp HEEEEC--SSSSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred eEEecc--CCCCeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 998742 23456777798865 5689999999999999999999999999863
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=7.1e-42 Score=324.95 Aligned_cols=215 Identities=26% Similarity=0.426 Sum_probs=183.1
Q ss_pred ceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCC---CCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCC
Q 010981 80 YWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCS---NCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTA 156 (496)
Q Consensus 80 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~---~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~ 156 (496)
+..|+++|+||||+|+|.|+|||||+++||+|..|. .|..+ +.|+|++|+|++..
T Consensus 12 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~-------~~y~~~~SsT~~~~--------------- 69 (239)
T 1b5f_A 12 DTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAH-------SMYESSDSSTYKEN--------------- 69 (239)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTS-------CCBCGGGCTTCEEE---------------
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCC-------CCCCCccCCCeeeC---------------
Confidence 449999999999999999999999999999999996 57765 78999999999753
Q ss_pred CCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCCc
Q 010981 157 TQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLS 236 (496)
Q Consensus 157 ~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~s 236 (496)
.|.|.+.|++|+ +.|.+++|+|+|++.. ..++.|||+....+.. +....++||||||++..+
T Consensus 70 --------~~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~-f~~~~~~GilGLg~~~~s 131 (239)
T 1b5f_A 70 --------GTFGAIIYGTGS-ITGFFSQDSVTIGDLV--------VKEQDFIEATDEADNV-FLHRLFDGILGLSFQTIS 131 (239)
T ss_dssp --------EEEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHH-HTTCSCCEEEECSCCSSS
T ss_pred --------CcEEEEEECCCc-EEEEEEEEEEEECCcE--------EccEEEEEEEeccCcc-ccccCcceEEecCccccc
Confidence 478999999998 7999999999998643 5679999998865421 123567999999999876
Q ss_pred --hHHHHHhcCCCC-ceeEEeecCC--CCccceEEeCCCCC----CCeEEeeCCCCCCceeEEEeEEEEccEEeecCccc
Q 010981 237 --VISQLASRGITP-RVFSHCLKGQ--GNGGGILVLGEILE----PSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSA 307 (496)
Q Consensus 237 --~~~~l~~~g~i~-~~FS~~l~~~--~~~~G~l~~Gg~d~----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~~~~~ 307 (496)
++.+|++||+|+ ++||+||.+. ....|+|+||++|+ +++.|+|+. .+.+|.|++++|.|+++.+.+.
T Consensus 132 ~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~--- 207 (239)
T 1b5f_A 132 VPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVT-YQYYWQFGIGDVLIGDKSTGFC--- 207 (239)
T ss_dssp CCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEE-EETTEEEEECCEEETTEECCTT---
T ss_pred cHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcc-cCCeEEEEeeEEEECCEEeccc---
Confidence 678899999996 8999999875 24589999999994 579999997 4679999999999999887542
Q ss_pred ccccCCCcEEEecccccccccHHHHHHHHHHHHH
Q 010981 308 FAASNNRETIVDSGTTLTYLVEEAFDPFVSAITA 341 (496)
Q Consensus 308 ~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~ 341 (496)
..+..+||||||+++++|++++++|.+++++
T Consensus 208 ---~~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 208 ---APGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp ---TTCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred ---CCCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 2346799999999999999999999998754
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=4.4e-38 Score=299.65 Aligned_cols=219 Identities=27% Similarity=0.414 Sum_probs=182.4
Q ss_pred cccEEEeeeeeccCCCCCCCCCcceeeecCCCCC------chHHHHHhcCCCC-ceeEEeecCCCCc--cceEEeCCCCC
Q 010981 202 TALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL------SVISQLASRGITP-RVFSHCLKGQGNG--GGILVLGEILE 272 (496)
Q Consensus 202 ~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~------s~~~~l~~~g~i~-~~FS~~l~~~~~~--~G~l~~Gg~d~ 272 (496)
+.++.|||++.+++.+. .....+||||||++.. +++++|++||+|+ ++||+||++.... +|+|+||++|+
T Consensus 5 v~~~~Fg~~~~~~~~~f-~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~ 83 (241)
T 1lya_B 5 VERQVFGEATKQPGITF-IAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDS 83 (241)
T ss_dssp EEEEEEEEEEECCSSTT-TSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCCG
T ss_pred ECCeEEEEEEEccCCcc-ccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcCH
Confidence 56799999999876432 2467899999999764 4789999999996 8999999986444 89999999994
Q ss_pred ----CCeEEeeCCCCCCceeEEEeEEEEccEEeecCcccccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcC
Q 010981 273 ----PSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVT 348 (496)
Q Consensus 273 ----~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~ 348 (496)
+++.|+|+. .+.+|.|++++|+|+++.+. ...+..+||||||+++++|++++++|.+++++...
T Consensus 84 ~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~-------~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~---- 151 (241)
T 1lya_B 84 KYYKGSLSYLNVT-RKAYWQVHLDQVEVASGLTL-------CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL---- 151 (241)
T ss_dssp GGEEEEEEEEECS-SBTTBEEEEEEEEETTSCEE-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE----
T ss_pred HHcCCceEEEECc-cccEEEEEEeEEEECCeeEe-------ccCCCEEEEECCCccccCCHHHHHHHHHHhCCeec----
Confidence 689999998 56899999999999987642 12456799999999999999999999999865421
Q ss_pred CCCCCCCceEEeeCCccccCCeEEEEecCCcEEEeCCCceEEEeeeeCCceEEEEEEEecC-----CCceeeCceEEeeE
Q 010981 349 PTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEEYLIHLGFYDGAAMWCIGFEKSP-----GGVSILGDLVLKDK 423 (496)
Q Consensus 349 ~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i~p~~y~~~~~~~~~~~~~cl~i~~~~-----~~~~iLG~~fl~~~ 423 (496)
..+.|.++|+....+|+|+|+| +|.+++|+|++|+++... .+...|.++|+..+ ...||||++|||++
T Consensus 152 -----~~g~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y~~~~~~-~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~ 224 (241)
T 1lya_B 152 -----IQGEYMIPCEKVSTLPAITLKL-GGKGYKLSPEDYTLKVSQ-AGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRY 224 (241)
T ss_dssp -----ETTEEEEEGGGGGGSCCEEEEE-TTEEEEECTTTSEEEETT-TTSSEEEESEEECCCCTTTCCCEEECHHHHTTE
T ss_pred -----cCCcEEEECCCCccCCeEEEEE-CCEEEEECHHHhEEEccC-CCCCeeEEEEEecccCCCCCCeEEechHHhcce
Confidence 1345899999878899999999 899999999999998542 22456777898753 46899999999999
Q ss_pred EEEEECCCCEEEEEeCC
Q 010981 424 IFVYDLARQRVGWANYD 440 (496)
Q Consensus 424 y~VfD~~~~~IGfa~~~ 440 (496)
|+|||++++|||||+++
T Consensus 225 y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 225 YTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp EEEEETTTTEEEEEEEC
T ss_pred EEEEECCCCEEEEEEcC
Confidence 99999999999999874
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.86 E-value=5.3e-22 Score=159.58 Aligned_cols=81 Identities=33% Similarity=0.572 Sum_probs=73.6
Q ss_pred ceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCC----CCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCC
Q 010981 80 YWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCS----NCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTT 155 (496)
Q Consensus 80 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~----~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~ 155 (496)
+..|+++|.||||||+|.|+|||||+++||+|..|. .|..+ +.|||++|+|++..
T Consensus 12 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~-------~~y~p~~SsT~~~~-------------- 70 (97)
T 1lya_A 12 DAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIH-------HKYNSDKSSTYVKN-------------- 70 (97)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTS-------CCBCGGGCTTCEEE--------------
T ss_pred CCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCC-------CCCCchhCCCceeC--------------
Confidence 349999999999999999999999999999999997 58765 79999999999754
Q ss_pred CCCCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEee
Q 010981 156 ATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDA 191 (496)
Q Consensus 156 ~~~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~ 191 (496)
.|.|.+.|++|+ +.|.+++|+|+|++
T Consensus 71 ---------~~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 71 ---------GTSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ---------EEEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred ---------CCcEEEEECCcE-EEEEEEEEEEEECC
Confidence 479999999999 89999999999974
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.72 E-value=5.7e-18 Score=133.70 Aligned_cols=81 Identities=30% Similarity=0.495 Sum_probs=69.9
Q ss_pred EEeeCCccccCCeEEEEecCCcEEEeCCCceEEEeeeeCCceEEEEEEEecC----CCceeeCceEEeeEEEEEECCCCE
Q 010981 358 YLVSNSVSEIFPQVSLNFEGGASMVLKPEEYLIHLGFYDGAAMWCIGFEKSP----GGVSILGDLVLKDKIFVYDLARQR 433 (496)
Q Consensus 358 y~~~c~~~~~~P~i~f~f~gg~~~~i~p~~y~~~~~~~~~~~~~cl~i~~~~----~~~~iLG~~fl~~~y~VfD~~~~~ 433 (496)
|.++|+....+|+|+|+| +|.+++|+|++|+++... .+...|.++|+..+ ...||||+.|||++|+|||++++|
T Consensus 3 y~v~C~~~~~~P~i~f~~-gg~~~~l~~~~yi~~~~~-~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~r 80 (87)
T 1b5f_B 3 LQVDCNTLSSMPNVSFTI-GGKKFGLTPEQYILKVGK-GEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLL 80 (87)
T ss_dssp CEECGGGGGGCCCEEEEE-TTEEEEECHHHHEEEESC-TTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTE
T ss_pred EEEECCCCCcCCcEEEEE-CCEEEEECHHHhEEEccC-CCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCE
Confidence 889999888899999999 899999999999998542 22356777898753 457999999999999999999999
Q ss_pred EEEEeCC
Q 010981 434 VGWANYD 440 (496)
Q Consensus 434 IGfa~~~ 440 (496)
||||+++
T Consensus 81 iGfA~~~ 87 (87)
T 1b5f_B 81 VGFAEAA 87 (87)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 9999864
No 38
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=89.02 E-value=0.36 Score=40.91 Aligned_cols=30 Identities=17% Similarity=0.066 Sum_probs=26.4
Q ss_pred CCceeeCceEEeeEEEEEECCCCEEEEEeC
Q 010981 410 GGVSILGDLVLKDKIFVYDLARQRVGWANY 439 (496)
Q Consensus 410 ~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~ 439 (496)
....|||..||+.+-.+.|++++++-|.+.
T Consensus 106 ~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 106 PMDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp SSSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred CcCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 345899999999999999999999998653
No 39
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=85.71 E-value=1 Score=35.04 Aligned_cols=27 Identities=22% Similarity=0.336 Sum_probs=24.1
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCeeEEeCC
Q 010981 84 FTKVKLGSPPKEFNVQIDTGSDILWVTCS 112 (496)
Q Consensus 84 ~~~i~vGtP~q~~~v~~DTGSs~~wv~~~ 112 (496)
++.|.||. |.+.+++|||.+++-+...
T Consensus 10 ~vtvkI~G--q~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIGG--QLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSEEESCC
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEecc
Confidence 46799998 9999999999999999754
No 40
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=83.27 E-value=1.1 Score=35.25 Aligned_cols=26 Identities=35% Similarity=0.402 Sum_probs=23.6
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCeeEEeC
Q 010981 84 FTKVKLGSPPKEFNVQIDTGSDILWVTC 111 (496)
Q Consensus 84 ~~~i~vGtP~q~~~v~~DTGSs~~wv~~ 111 (496)
++.|.||. |.+.+++|||.+++-+..
T Consensus 10 ~v~v~I~G--q~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 10 TTIVLIND--TPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEEH
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEcc
Confidence 57899998 999999999999999973
No 41
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=81.53 E-value=1.9 Score=33.49 Aligned_cols=27 Identities=22% Similarity=0.240 Sum_probs=24.0
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCeeEEeCC
Q 010981 84 FTKVKLGSPPKEFNVQIDTGSDILWVTCS 112 (496)
Q Consensus 84 ~~~i~vGtP~q~~~v~~DTGSs~~wv~~~ 112 (496)
++.+.||. |.+..++|||.+++-+...
T Consensus 10 ~vti~I~G--q~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIEG--QPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEESSC
T ss_pred eEEEEECC--EEEEEEEecCCCceEEcCc
Confidence 56799999 9999999999999999654
No 42
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=79.97 E-value=1.5 Score=34.85 Aligned_cols=31 Identities=26% Similarity=0.428 Sum_probs=25.1
Q ss_pred EEEEEeC---CCCcEEEEEEEcCCCeeEEeCCCC
Q 010981 84 FTKVKLG---SPPKEFNVQIDTGSDILWVTCSSC 114 (496)
Q Consensus 84 ~~~i~vG---tP~q~~~v~~DTGSs~~wv~~~~C 114 (496)
.+.|.|| +|+|.+..++|||-+++-+...++
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 3456666 789999999999999999986543
No 43
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=76.42 E-value=2.1 Score=35.92 Aligned_cols=28 Identities=11% Similarity=0.360 Sum_probs=25.4
Q ss_pred eEEEEEEeCCCCcEEEEEEEcCCCeeEEeC
Q 010981 82 LYFTKVKLGSPPKEFNVQIDTGSDILWVTC 111 (496)
Q Consensus 82 ~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~ 111 (496)
.+++++.|+. +++.+++|||++.+-+..
T Consensus 26 ~~~v~v~InG--~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 26 MLYINIEINN--YPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEEEH
T ss_pred eEEEEEEECC--EEEEEEEECCCCccccCH
Confidence 7899999988 899999999999988864
No 44
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=72.91 E-value=3.2 Score=33.30 Aligned_cols=26 Identities=19% Similarity=0.286 Sum_probs=22.7
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCeeEEeCC
Q 010981 84 FTKVKLGSPPKEFNVQIDTGSDILWVTCS 112 (496)
Q Consensus 84 ~~~i~vGtP~q~~~v~~DTGSs~~wv~~~ 112 (496)
++ |.||. |.+..++|||.+++-+...
T Consensus 16 ~v-ikI~G--q~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 16 IL-IFVNG--YPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EE-EEETT--EEEEEEECTTCSSCEEEGG
T ss_pred EE-EEECC--EEEEEEecCCCCcEEEccc
Confidence 34 99998 9999999999999999753
No 45
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=69.75 E-value=3.6 Score=34.58 Aligned_cols=29 Identities=10% Similarity=0.385 Sum_probs=26.4
Q ss_pred eEEEEEEeCCCCcEEEEEEEcCCCeeEEeCC
Q 010981 82 LYFTKVKLGSPPKEFNVQIDTGSDILWVTCS 112 (496)
Q Consensus 82 ~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~ 112 (496)
.|++++.|.. +++++++|||++.+.+...
T Consensus 24 ~l~v~~~Ing--~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 24 MLYINCKVNG--HPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEEEHH
T ss_pred EEEEEEEECC--EEEEEEEeCCCCcEeeCHH
Confidence 8899999988 9999999999999998654
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=68.09 E-value=5.2 Score=31.89 Aligned_cols=28 Identities=25% Similarity=0.314 Sum_probs=24.6
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCeeEEeCCC
Q 010981 84 FTKVKLGSPPKEFNVQIDTGSDILWVTCSS 113 (496)
Q Consensus 84 ~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~ 113 (496)
.+.+.||. |.+..++|||-+++-+...+
T Consensus 11 ~vti~I~G--q~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLDD--KMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEECC--EEEEEEEccCCCceEEeccc
Confidence 46799998 99999999999999997654
No 47
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=56.71 E-value=9.9 Score=31.58 Aligned_cols=27 Identities=22% Similarity=0.164 Sum_probs=24.8
Q ss_pred CceeeCceEEeeEEEEEECCCCEEEEE
Q 010981 411 GVSILGDLVLKDKIFVYDLARQRVGWA 437 (496)
Q Consensus 411 ~~~iLG~~fl~~~y~VfD~~~~~IGfa 437 (496)
...|||..||+++-.+.|+.+++|-|.
T Consensus 108 ~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 108 IDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp CSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 357999999999999999999999995
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=56.02 E-value=14 Score=30.34 Aligned_cols=29 Identities=21% Similarity=0.221 Sum_probs=24.8
Q ss_pred eEEEEEEeCCCCcEEEEEEEcCCCeeEEeCC
Q 010981 82 LYFTKVKLGSPPKEFNVQIDTGSDILWVTCS 112 (496)
Q Consensus 82 ~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~ 112 (496)
.=++.++|+. |.+..++|||.+++-+...
T Consensus 22 RP~v~i~I~G--~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVGG--QPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEECC--EEEEEEEeCCCCeEEEccc
Confidence 3367899999 9999999999999999754
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=52.48 E-value=15 Score=29.78 Aligned_cols=23 Identities=22% Similarity=0.289 Sum_probs=19.7
Q ss_pred eCCCCcEEEEEEEcCCCeeEEeCCC
Q 010981 89 LGSPPKEFNVQIDTGSDILWVTCSS 113 (496)
Q Consensus 89 vGtP~q~~~v~~DTGSs~~wv~~~~ 113 (496)
||. |.+..++|||-+++-+...+
T Consensus 27 i~g--q~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QRS--VYITALLDSGADITIISEED 49 (124)
T ss_dssp CSE--EEEEEEECTTCSSCEEETTT
T ss_pred CCC--EEEEEEecCCCCcEEEeccc
Confidence 565 88999999999999998654
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=45.85 E-value=17 Score=32.06 Aligned_cols=27 Identities=19% Similarity=0.299 Sum_probs=23.9
Q ss_pred EEEEEEeCCCCcEEEEEEEcCCCeeEEeC
Q 010981 83 YFTKVKLGSPPKEFNVQIDTGSDILWVTC 111 (496)
Q Consensus 83 Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~ 111 (496)
-.+.|.||. |.+..++|||.+++-+..
T Consensus 9 P~vtv~I~G--q~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIGG--QLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEECS
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEec
Confidence 367899999 999999999999999964
No 51
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=30.32 E-value=58 Score=28.67 Aligned_cols=27 Identities=19% Similarity=0.311 Sum_probs=23.9
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCeeEEeCC
Q 010981 84 FTKVKLGSPPKEFNVQIDTGSDILWVTCS 112 (496)
Q Consensus 84 ~~~i~vGtP~q~~~v~~DTGSs~~wv~~~ 112 (496)
.+.+.||. |.+..++|||.+++-+...
T Consensus 114 ~~~iki~G--q~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 114 LVTIRIGG--QLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred cEEEEECC--EEEeeeecccCCceeeecc
Confidence 67899999 9999999999999999643
No 52
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=24.95 E-value=48 Score=20.56 Aligned_cols=19 Identities=11% Similarity=-0.053 Sum_probs=13.0
Q ss_pred CCchhhhhcccchhhHHHH
Q 010981 465 SSSSIEMLFKVLPLSILAL 483 (496)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~ 483 (496)
+..+.+++++++..+++.+
T Consensus 6 ~~ls~GaIAGiVvG~v~gv 24 (38)
T 2k1k_A 6 RGLTGGEIVAVIFGLLLGA 24 (38)
T ss_dssp TTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCceeeeehHHHHHH
Confidence 4456777888888877543
Done!