Query 010983
Match_columns 496
No_of_seqs 253 out of 841
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 06:46:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010983.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010983hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2516 Protein involved in do 100.0 5E-117 1E-121 888.5 23.4 467 16-485 2-482 (517)
2 PF03901 Glyco_transf_22: Alg9 100.0 8.2E-67 1.8E-71 552.3 35.0 385 19-411 6-417 (418)
3 PLN02816 mannosyltransferase 100.0 6.5E-64 1.4E-68 541.3 40.5 376 20-411 46-450 (546)
4 KOG2515 Mannosyltransferase [C 100.0 1.9E-64 4.2E-69 515.4 27.6 382 18-410 20-423 (568)
5 KOG1771 GPI-alpha-mannosyltran 100.0 2.8E-51 6E-56 412.2 16.4 285 19-335 11-308 (464)
6 KOG4123 Putative alpha 1,2 man 100.0 2.7E-31 5.8E-36 270.3 16.8 312 8-330 3-344 (550)
7 PRK13279 arnT 4-amino-4-deoxy- 99.1 1.4E-07 3E-12 103.5 33.1 299 25-341 21-343 (552)
8 TIGR03663 conserved hypothetic 99.1 1.2E-07 2.7E-12 101.6 32.0 283 30-340 21-349 (439)
9 PF09852 DUF2079: Predicted me 98.6 7.7E-05 1.7E-09 80.4 32.4 102 103-205 64-167 (449)
10 COG1807 ArnT 4-amino-4-deoxy-L 98.2 0.0038 8.3E-08 68.6 33.5 128 28-168 26-153 (535)
11 PF13231 PMT_2: Dolichyl-phosp 97.7 0.0033 7.1E-08 56.7 17.2 119 87-210 14-138 (159)
12 PF04188 Mannosyl_trans2: Mann 97.2 0.023 5.1E-07 61.3 19.1 168 111-283 125-313 (443)
13 TIGR03766 conserved hypothetic 96.4 1.8 3.9E-05 47.3 26.1 114 86-202 129-252 (483)
14 PF09586 YfhO: Bacterial membr 96.2 3.7 8.1E-05 47.7 29.3 26 312-337 338-363 (843)
15 PF10131 PTPS_related: 6-pyruv 95.6 5.4 0.00012 45.1 27.9 26 312-337 257-282 (616)
16 PF09913 DUF2142: Predicted me 94.7 2.3 5E-05 44.7 18.5 79 84-168 107-185 (389)
17 COG5542 Predicted integral mem 94.4 4.5 9.7E-05 43.1 19.0 170 100-274 118-303 (420)
18 PF09594 DUF2029: Protein of u 93.9 4.9 0.00011 38.6 17.5 51 143-194 68-118 (241)
19 PF04922 DIE2_ALG10: DIE2/ALG1 93.7 1.6 3.5E-05 46.2 14.5 148 35-198 9-161 (379)
20 COG1287 Uncharacterized membra 93.6 3.3 7.2E-05 48.0 18.0 123 32-164 48-179 (773)
21 COG4745 Predicted membrane-bou 84.5 6.5 0.00014 42.4 9.8 124 23-168 29-153 (556)
22 KOG2292 Oligosaccharyltransfer 77.4 1.3E+02 0.0027 33.7 17.6 24 313-336 407-430 (751)
23 PF02366 PMT: Dolichyl-phospha 76.5 79 0.0017 30.8 20.3 71 98-168 82-153 (245)
24 PF14897 EpsG: EpsG family 76.4 88 0.0019 31.3 21.4 54 141-196 104-157 (330)
25 COG4485 Predicted membrane pro 66.3 2.5E+02 0.0055 32.4 22.7 128 38-172 45-181 (858)
26 KOG3893 Mannosyltransferase [C 63.8 56 0.0012 34.0 9.8 135 102-237 99-244 (405)
27 PLN02841 GPI mannosyltransfera 59.6 2.6E+02 0.0057 30.4 16.4 72 128-200 113-184 (440)
28 PF02516 STT3: Oligosaccharyl 59.6 2.5E+02 0.0055 30.1 17.8 124 32-167 29-165 (483)
29 PF11028 DUF2723: Protein of u 58.3 1.7E+02 0.0037 27.8 13.6 29 98-126 40-68 (178)
30 TIGR03459 crt_membr carotene b 58.2 2.9E+02 0.0062 30.4 20.1 108 89-200 157-265 (470)
31 COG3463 Predicted membrane pro 54.0 3.2E+02 0.007 29.7 20.7 74 104-177 93-168 (458)
32 KOG2647 Predicted Dolichyl-pho 52.6 2.1E+02 0.0045 31.0 12.1 77 110-188 137-214 (444)
33 PF05007 Mannosyl_trans: Manno 44.7 1.4E+02 0.0031 30.0 9.2 56 146-202 2-57 (259)
34 PF06728 PIG-U: GPI transamida 37.5 5.2E+02 0.011 27.3 19.5 74 128-202 122-195 (382)
35 PF11847 DUF3367: Domain of un 36.0 4.7E+02 0.01 30.1 12.3 83 82-167 60-144 (680)
36 PF10190 Tmemb_170: Putative t 27.0 3E+02 0.0065 24.0 7.1 23 300-323 27-49 (105)
37 PF11529 AvrL567-A: Melampsora 24.4 59 0.0013 28.1 2.2 13 464-476 113-126 (127)
38 PHA03164 hypothetical protein; 23.8 1.1E+02 0.0024 25.0 3.5 68 301-374 18-87 (88)
39 PHA02980 hypothetical protein; 20.3 7.2E+02 0.016 23.3 8.9 15 34-48 5-19 (160)
40 COG1928 PMT1 Dolichyl-phosphat 20.1 1.4E+03 0.03 26.5 13.4 70 98-168 109-180 (699)
No 1
>KOG2516 consensus Protein involved in dolichol pathway for N-glycosylation (mannosyltransferase family) [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.3e-117 Score=888.46 Aligned_cols=467 Identities=41% Similarity=0.668 Sum_probs=439.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCccccHHHHHHHhcc-CcccccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhCCCc
Q 010983 16 DIVLGLIATFYVLAMPYTKVEESFNVQAMHDILYHR-HHLDIYDHLEFPGVVPRTFIGALLVSVLASPIILVMSFLHLPK 94 (496)
Q Consensus 16 ~~ll~~~~~~~~~~~pyt~~DEsFn~~e~h~~L~~g-~g~~~we~~~fPg~~~RSfi~pll~a~~~~P~~~l~~~lg~~~ 94 (496)
|.+++.++.+|+..+||||||||||.||+||++++. .+...|||.||||+|||||+||+++|.+++|.+.+.+++..+|
T Consensus 2 ~~llv~v~~~hli~~PfTKVEESFnlQA~HDil~~~~~~~sqYDHleFPGVVpRTFigplviAvlSsP~~yi~s~~~~~k 81 (517)
T KOG2516|consen 2 DILLVTVIGYHLIKAPFTKVEESFNLQAIHDILTYRWDDLSQYDHLEFPGVVPRTFIGPLVIAVLSSPYVYIFSLLVIPK 81 (517)
T ss_pred cEEEEEeeeeeeeecCcchHhhhhhHHHHHHHHHhccchhhhcccccCCCcCccccccceeeeeccccHHHHHHHHhccH
Confidence 445566778999999999999999999999999886 8999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHHHhcCChhh
Q 010983 95 THGLIAVRLALGCITLSTLRF-FRAQVRYKFGSQVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGFWLKGDFYA 173 (496)
Q Consensus 95 ~~~~~~~Rl~lgl~s~~~~~~-~~~~i~~~~g~~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~~l~~~~~~ 173 (496)
+++|+++|.++|++++.+..+ +.+.++|++|..+|.|+.+++++|||.+||+||||||.|++++++.|+++|++|++..
T Consensus 82 ~~~qlvvR~~lGl~~~~s~~~~l~~~v~k~fg~~~~~~f~l~~~~qFHlmFYmtRpLpNifaLplv~~al~~~L~~~y~~ 161 (517)
T KOG2516|consen 82 FWVQLVVRGTLGLLNAISFLYKLQCSVSKIFGTEVGTWFILFTCTQFHLMFYMTRPLPNIFALPLVNHALALLLRGRYYG 161 (517)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHheeeeecCCCchHHHHHHHHHHHHHHHhccchh
Confidence 999999999999999998777 9999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhHhhhhhhhhhHHHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhhhhhhhccC
Q 010983 174 ALNCLIFSAVVFRCDMVLLLCPLGLVLLLTK-SISLWKALKCCIGMVLLSVGLTVLVDSIMWKKLVWPEFEVLWFNSVLN 252 (496)
Q Consensus 174 ~i~~l~~a~vv~Rp~~a~l~~pl~l~~l~~~-~~~~~~~l~~~i~~~l~~l~~~v~iDs~fyg~~~~p~~n~~~fNv~~~ 252 (496)
+|.+.+++++++|+|.+++.+++.+..++.| |+++.++++.|+.++++++++++.|||||||||+|||.+.++||+++|
T Consensus 162 ~I~~s~~a~ivfR~El~lllg~i~L~~~l~~RkVsl~~al~vgi~~~~~~la~si~VDSYFW~~~~wPEgev~~fNvV~n 241 (517)
T KOG2516|consen 162 AISLSAFAAIVFRSELALLLGCILLPLLLQRRKVSLDGALKVGIPAGLLCLAASILVDSYFWGRWCWPEGEVFLFNVVEN 241 (517)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeehHhHHHhccchhhhhheeeeeehhhhhccccCcCcceEEEEeecc
Confidence 9999999999999999999999988776654 588889999999999999999999999999999999999999999999
Q ss_pred ccccccccchHHHHHhhHhHHhhhhHHHHHHHHhhhcccchhHHHHHHHHHHhccCCcccchhhhhhhhHHHHHHHHHHH
Q 010983 253 RSSEWGTHSFHWYFTSALPRSLLAAYPLCFLGALLDRRVLPFVIPVFTFVLLYSKLPHKELRFIISSVPIFNLSAAVAAS 332 (496)
Q Consensus 253 ~ss~yGt~P~~~Yf~~~lP~~l~~~lpl~~~g~~~~~r~~~ll~~~l~~v~v~SllpHKE~RFI~p~~Pll~l~aA~~~~ 332 (496)
+||+|||+|++|||++++|+.++..+.+..+|...++|.+++.++++.++++||++||||+|||+|++|.+|++||.|++
T Consensus 242 kSs~wGtsPflwYFysaLpr~~~ttlLlvpig~~~~~~~~~~vl~sL~fi~lySflpHKElRFIIY~~P~~nl~aA~gca 321 (517)
T KOG2516|consen 242 KSSNWGTSPFLWYFYSALPRLFLTTLLLVPIGLVLIPRLRPLVLVSLFFIFLYSFLPHKELRFIIYAFPWFNLAAAIGCA 321 (517)
T ss_pred cccccCCCccHHHHHHHHHHHHHHHHHHHhhhhhcccCccceeHHHHHHHHHHHhCCcceeEEEEeehHHHHHHHHHHHH
Confidence 99999999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcchh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHhccCCCCCCceeEEeecCCCCCcccccc
Q 010983 333 RIFMNRKKA-FWKLLSIILIGFLLISLGCTAVTFMASYENYPSGYALKYLHQIGHLASNTEEQWVHIDPYSAMNGISRFC 411 (496)
Q Consensus 333 ~l~~~~~k~-~~~~~~~~~~~~~~~~~~~s~~~~~~s~~NYpgg~al~~lh~~~~~~~~~~~~~vhid~~a~~tGvsrF~ 411 (496)
++|++++|+ ..+.+.+.++.++++++.+|...+++|..|||||+|++++|+.+.+ .++|+|||||++||||||||+
T Consensus 322 ~l~~n~kks~~~~~l~l~v~~hli~n~~~s~~~LyVs~~nYPGg~ALtrl~~~~~~---~~nvtVhIdv~~aqTGVtrF~ 398 (517)
T KOG2516|consen 322 RLWNNSKKSKKIFELLLLVIFHLIINFFISSFFLYVSQYNYPGGLALTRLHRLEAN---HPNVTVHIDVAPAQTGVTRFL 398 (517)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHhcCC---CCceEEEecchhhhhchHHHh
Confidence 999999988 4456677788899999999999999999999999999999988764 578999999999999999999
Q ss_pred ccCCCceeccCCCCChhhhccCCCcEEEecCCC---------CCCeeEEEeecCccccccCCC-CCCceeeecCeEEEec
Q 010983 412 ENDFPWRYSKEESIPLKEYQNRNFTYLINEHLL---------VEGYKCLFSMDGFSRVRPQLR-FPPFLLIKEPKVYVHG 481 (496)
Q Consensus 412 ~~~~~w~y~K~e~~~~~~~~~~~f~~li~~~~~---------~~~~~~~~~~~~f~~i~~~~~-~~~~~~~~~~~~~~~~ 481 (496)
|.+..|+||||||.++.+..|-.|||+++|+++ .+.||.+.++++|.|+.++.. .+|.+|+.+|++.++|
T Consensus 399 qln~~w~YdKtE~~~~~~~~~~~~~~l~~~~~~~~te~~~~~~~~~~~l~~v~~f~~~~~~~s~~~p~~i~~~p~lill~ 478 (517)
T KOG2516|consen 399 QLNSAWTYDKTENPKPLQNSLFAFTFLLTEAETPSTELENKTFDVHESLNSVTKFTGLPIWLSNLFPFEIPAQPVLILLK 478 (517)
T ss_pred ccCcceeecCcCCCCcccccchhhheeeeecCCCcchhhhhhhhHHHHhhhhcccccCChhHhccCCcccccceeEEeec
Confidence 999999999999999999889999999998764 367999999999999999887 8889999999999999
Q ss_pred cCCC
Q 010983 482 NIKN 485 (496)
Q Consensus 482 ~~~~ 485 (496)
|+..
T Consensus 479 k~~~ 482 (517)
T KOG2516|consen 479 KKPR 482 (517)
T ss_pred cccc
Confidence 8653
No 2
>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2.4.1.- from EC [, ]. At least some members are localised in endoplasmic reticulum and involved in GPI anchor biosynthesis [, ]. In yeast the SMP3 (YOR149C) has been implemented in plasmid stability [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0006506 GPI anchor biosynthetic process, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=100.00 E-value=8.2e-67 Score=552.34 Aligned_cols=385 Identities=25% Similarity=0.359 Sum_probs=316.2
Q ss_pred HHHHHHHHHHhCCCC-CCCCccccHHHHHHHhccCcccccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhC-CCchH
Q 010983 19 LGLIATFYVLAMPYT-KVEESFNVQAMHDILYHRHHLDIYDHLEFPGVVPRTFIGALLVSVLASPIILVMSFLH-LPKTH 96 (496)
Q Consensus 19 l~~~~~~~~~~~pyt-~~DEsFn~~e~h~~L~~g~g~~~we~~~fPg~~~RSfi~pll~a~~~~P~~~l~~~lg-~~~~~ 96 (496)
+++.++..++..++. ||||+||++|++|.+++|+|.+||||++++ +.||+++|++++.++++ .+.++ .++..
T Consensus 6 ll~~R~~~a~~~~~~f~pDE~fq~~E~ah~~~~g~g~~tWE~~~~~--~iRS~~~p~i~~~~~~~----~~~~~~~~~~~ 79 (418)
T PF03901_consen 6 LLAFRLLNALFPQTSFHPDEYFQSLEPAHRLVFGYGYLTWEWSPFP--GIRSWLFPLIFAIPYKL----LARLGLDSPWA 79 (418)
T ss_pred HHHHHHHHHHhccCCCCCCcccccHHhhhhhhcCccchhhhhccCC--CCCChHHHHHHHHHHHH----HHHHhhccchh
Confidence 344566666666665 999999999999999999999999998555 47999999999988773 33344 46667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHHHhc--------
Q 010983 97 GLIAVRLALGCITLSTLRFFRAQVRYKFGSQVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGFWLK-------- 168 (496)
Q Consensus 97 ~~~~~Rl~lgl~s~~~~~~~~~~i~~~~g~~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~~l~-------- 168 (496)
.++++|+++|++++.+|+++++.+++++|++++.++++++++|||++|+++||+|||+|+.++++|+++|++
T Consensus 80 ~~~~~Rl~~~~~s~~~d~~~~~~~~~~~~~~~a~~~l~l~~~s~~~~~~~~Rtlsns~e~~l~~~al~~~~~~~~~~~~~ 159 (418)
T PF03901_consen 80 VFYAPRLVLALLSALSDYYLYRLVKRLFGSSVALWALLLSLFSWFMFYYSSRTLSNSFETILVLLALYLWLRSLSRSNSS 159 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhhhhHHHhhhHHHHhhcccCccHHHHHHHHHHHHHHHHhhccCCCc
Confidence 789999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred ---CChhhhHHHhHhhhhhhhhhHHHHHHHHHHHHHHh--cc--ccH-HHHHHHHHHHHHHHHHHHHhhhhhhccccccc
Q 010983 169 ---GDFYAALNCLIFSAVVFRCDMVLLLCPLGLVLLLT--KS--ISL-WKALKCCIGMVLLSVGLTVLVDSIMWKKLVWP 240 (496)
Q Consensus 169 ---~~~~~~i~~l~~a~vv~Rp~~a~l~~pl~l~~l~~--~~--~~~-~~~l~~~i~~~l~~l~~~v~iDs~fyg~~~~p 240 (496)
++......+++.+++++|||.+++++|++++.+.+ ++ ..+ .+.+..++.++++++++++.+||+||||+++|
T Consensus 160 ~~~~~~~~~~~~l~~~~~~~Rpt~~~~~~pl~l~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~iDs~~yg~~~~~ 239 (418)
T PF03901_consen 160 SSSKRYLLAIGLLAGLAVFFRPTSALFWLPLGLYLLWRLIGRRWKSFLFLLILIGLLSALLVLAISILIDSYFYGKWVFP 239 (418)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 12233555677778899999999999999998843 21 112 24455677777888889999999999999999
Q ss_pred hhhhhhhhhccCccccccccchHHHHHhhHhHHhhhhHHHHHHHHhhhc------ccchhHHHHHHHHHHhccCCcccch
Q 010983 241 EFEVLWFNSVLNRSSEWGTHSFHWYFTSALPRSLLAAYPLCFLGALLDR------RVLPFVIPVFTFVLLYSKLPHKELR 314 (496)
Q Consensus 241 ~~n~~~fNv~~~~ss~yGt~P~~~Yf~~~lP~~l~~~lpl~~~g~~~~~------r~~~ll~~~l~~v~v~SllpHKE~R 314 (496)
|+|+++||+++|+|++||+||||||+++++|++++..+|+.+.+....+ +...+..+++.++++||++||||+|
T Consensus 240 ~~n~~~~Nv~~~~s~~yG~~p~~~Y~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~S~~~HKE~R 319 (418)
T PF03901_consen 240 PWNFFKFNVLEGNSSFYGTHPWHWYFTQGLPNLLGPFLPFLLFGLFILRSRKYKRRLSILLLPILFWLAVYSLLPHKEFR 319 (418)
T ss_pred hhhheeeeecCCchhhhhhcceEEEEeecchhHhHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhcccCCccce
Confidence 9999999999999999999999999999999999888888777765542 2356778999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCch-HHHHHHHHhccCC--CCC
Q 010983 315 FIISSVPIFNLSAAVAASRIFMNRKKAFWKLLSIILIGFLLISLGCTAVTFMASYENYPSG-YALKYLHQIGHLA--SNT 391 (496)
Q Consensus 315 FI~p~~Pll~l~aA~~~~~l~~~~~k~~~~~~~~~~~~~~~~~~~~s~~~~~~s~~NYpgg-~al~~lh~~~~~~--~~~ 391 (496)
||+|++|++++.||.+++++.++++|...+ .......++.++..+..+......|+|.+ ++++++|+....+ ..+
T Consensus 320 Fi~P~~Pl~~l~aa~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~h~~g~~~~~~~~~~l~~~~~~~~~~~~ 397 (418)
T PF03901_consen 320 FIYPLLPLLLLFAAIGLSRLRRNSWKRRRR--IVLLVLLIVFNLILSLYFGLIHQYGAPPALEVMNQLRNEPQQNRDSFN 397 (418)
T ss_pred ehHHHHHHHHHHHHHHHHHHhhhhhHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCccHHHHHHHHHhccccccccCC
Confidence 999999999999999999998544443222 11222234455566666667777788755 8999999876322 234
Q ss_pred CceeEEeecCCCCCcccccc
Q 010983 392 EEQWVHIDPYSAMNGISRFC 411 (496)
Q Consensus 392 ~~~~vhid~~a~~tGvsrF~ 411 (496)
++.+||++.++.+|+.+.|.
T Consensus 398 ~~~~v~~~~~ch~~P~~~~l 417 (418)
T PF03901_consen 398 SPSSVCFLMPCHSTPSYSFL 417 (418)
T ss_pred CCcEEEEeCCCCCCCCcccC
Confidence 67899999999999998874
No 3
>PLN02816 mannosyltransferase
Probab=100.00 E-value=6.5e-64 Score=541.26 Aligned_cols=376 Identities=17% Similarity=0.225 Sum_probs=295.7
Q ss_pred HHHHHH-HHHhCCCCCCCCccccHHHHHHHhccCcccccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhCCCch-HH
Q 010983 20 GLIATF-YVLAMPYTKVEESFNVQAMHDILYHRHHLDIYDHLEFPGVVPRTFIGALLVSVLASPIILVMSFLHLPKT-HG 97 (496)
Q Consensus 20 ~~~~~~-~~~~~pyt~~DEsFn~~e~h~~L~~g~g~~~we~~~fPg~~~RSfi~pll~a~~~~P~~~l~~~lg~~~~-~~ 97 (496)
++.+++ +++...|.+|||+||++|+.|.+.+|+|.+||||+ |+ +||+++|++++++++ +++.++.++. .+
T Consensus 46 ~~~R~~~al~~~t~f~pDE~fQslE~ah~~vfG~G~lTWEw~--~~--lRS~~~Pll~a~~~~----~~~~l~~~~~~~~ 117 (546)
T PLN02816 46 LAFRVVNALLIQTYFNPDEHWQSLEVAHRTIFGYGYMTWEWK--RG--IRSYLHPMLFAFLYK----LLQVTGLDTPYIM 117 (546)
T ss_pred HHHHHHHHHHccccCCCCchhhhHHHHHHHHhCCcccceecC--CC--ccchhHHHHHHHHHH----HHHHhcCCcHHHH
Confidence 334444 44478999999999999999999889999999999 64 899999999999888 5566676544 55
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHHHhcC--------
Q 010983 98 LIAVRLALGCITLSTLRFFRAQVRYKFGSQVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGFWLKG-------- 169 (496)
Q Consensus 98 ~~~~Rl~lgl~s~~~~~~~~~~i~~~~g~~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~~l~~-------- 169 (496)
++++|+++|++++++|+++++.+++.+|.++|.|++++++++|+++||++||+||++|+.++++|+++|+..
T Consensus 118 ~~~pRl~~al~sal~D~~l~kl~~~~~g~~~A~~~L~~sl~swf~~y~~sRTfSNslEt~Lt~lAL~~w~~~~~~~~~~~ 197 (546)
T PLN02816 118 IKAPRLMQSIFSAIGDLYLYKLSDALYGGNVATWSLFCQMANWFIFFCLNRTFSNCLETVLTIMGLYYWPCIRDSSIDYP 197 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHhhCccchhHHHHHHHHHHHHHhhcccccccccc
Confidence 789999999999999999999999999999999999999999999999999999999999999999998621
Q ss_pred -ChhhhHHHhHhhhhhhhhhHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhhhhhh
Q 010983 170 -DFYAALNCLIFSAVVFRCDMVLLLCPLGLVLLLTKSISLWKALKCCIGMVLLSVGLTVLVDSIMWKKLVWPEFEVLWFN 248 (496)
Q Consensus 170 -~~~~~i~~l~~a~vv~Rp~~a~l~~pl~l~~l~~~~~~~~~~l~~~i~~~l~~l~~~v~iDs~fyg~~~~p~~n~~~fN 248 (496)
+.+.++.+.+ .++++|||++++|+|+++..+++++.+.+.++..++..+++++++++.|||+|||+|++||+|+++||
T Consensus 198 ~~~~~~L~la~-la~~iRPt~ailwl~l~l~~l~~~~~~~~~l~~~~l~~g~~~l~~s~~IDs~fyg~~~~p~~nfl~FN 276 (546)
T PLN02816 198 VNRKWGLVIAA-LACAIRPTSAVIWLYVGMLELFLTPNKVKFIILEVIPIGSLVLGFTCLLDRLMYGSWVIVPLNFLKFN 276 (546)
T ss_pred chhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhHHHhhCCcccchhhheeEe
Confidence 1222444444 45666999999999999998876544455556667777888888999999999999999999999999
Q ss_pred hccCccccccccchHHHHHhhHhHHhhhhHHHHHHHHhhhcccchhHHHHHHHHHHhccCCcccchhhhhhhhHHHHHHH
Q 010983 249 SVLNRSSEWGTHSFHWYFTSALPRSLLAAYPLCFLGALLDRRVLPFVIPVFTFVLLYSKLPHKELRFIISSVPIFNLSAA 328 (496)
Q Consensus 249 v~~~~ss~yGt~P~~~Yf~~~lP~~l~~~lpl~~~g~~~~~r~~~ll~~~l~~v~v~SllpHKE~RFI~p~~Pll~l~aA 328 (496)
+++|+|++||||||||||+|++|++++..+|+.+.|....+ .+.+..++++++++||++||||+|||+|++|++++.||
T Consensus 277 v~~~~ss~YGt~PWh~Yf~~glP~~l~~~lpf~l~gl~~~~-~~~l~~~~l~~i~i~S~l~HKE~RFI~P~lPll~i~aa 355 (546)
T PLN02816 277 FLSSGGDYYGTHPWHWYFTQGFLVMLFTFTPFSIAGIIKSK-NQKLSALILWVLAIYSILGHKEFRFVLPVLPIALIFSG 355 (546)
T ss_pred eccCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHcCCcchHHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999989999999976443 44556777788999999999999999999999999999
Q ss_pred HHHHHHhhhcc-------------h---hHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCch-HHHHHHHHhccCCCC
Q 010983 329 VAASRIFMNRK-------------K---AFW-KLLSIILIGFLLISLGCTAVTFMASYENYPSG-YALKYLHQIGHLASN 390 (496)
Q Consensus 329 ~~~~~l~~~~~-------------k---~~~-~~~~~~~~~~~~~~~~~s~~~~~~s~~NYpgg-~al~~lh~~~~~~~~ 390 (496)
.+++++....+ | +.+ +.....+..++++|+... ++.+...-.|+ ++++.+++...++
T Consensus 356 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ni~~a---~y~s~~Hq~G~i~vm~~l~~~~~~~-- 430 (546)
T PLN02816 356 YAFAQMEVSGSSSSSSVTKKKQVPRQNHTKWSPKLRLSVYFLLATNIPMA---LYMSLFHQRGTEDAMNYLSDEAYKG-- 430 (546)
T ss_pred HHHHHHHhhhccccccccccccccccccchhhHHHHHHHHHHHHHHHHHH---HHHHHHhcccHHHHHHHHHhhhhcc--
Confidence 99998753210 0 001 111111122223333222 46667777788 9999999865321
Q ss_pred CCceeEEeecCCCCCcccccc
Q 010983 391 TEEQWVHIDPYSAMNGISRFC 411 (496)
Q Consensus 391 ~~~~~vhid~~a~~tGvsrF~ 411 (496)
+..+|+.=.++.+|+-....
T Consensus 431 -~~~sv~fLmpCHsTP~yShl 450 (546)
T PLN02816 431 -RVKSILFLMPCHSTPYYSTL 450 (546)
T ss_pred -CcceEEEEecccCCCCeeee
Confidence 22245555555555544443
No 4
>KOG2515 consensus Mannosyltransferase [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-64 Score=515.37 Aligned_cols=382 Identities=21% Similarity=0.281 Sum_probs=316.6
Q ss_pred HHHHHHHHHHHhCCCCCCCCccccHHHHHHHhccCcccccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhCCCchHH
Q 010983 18 VLGLIATFYVLAMPYTKVEESFNVQAMHDILYHRHHLDIYDHLEFPGVVPRTFIGALLVSVLASPIILVMSFLHLPKTHG 97 (496)
Q Consensus 18 ll~~~~~~~~~~~pyt~~DEsFn~~e~h~~L~~g~g~~~we~~~fPg~~~RSfi~pll~a~~~~P~~~l~~~lg~~~~~~ 97 (496)
+++..++.++.++-+.||||+||||||.|++.+|+|.|||||+ |.+++||+.+.++++.... ...+++|.+|..+
T Consensus 20 ~lls~Rl~sA~~~iI~DCDEvfNYWEPLHyllyG~GfQTWEYS--P~yaiRSy~Yillh~~pg~---~~a~~fg~~ki~v 94 (568)
T KOG2515|consen 20 LLLSLRLCSATFSIISDCDEVFNYWEPLHYLLYGEGFQTWEYS--PEYAIRSYAYILLHYVPGY---FVAKLFGLSKILV 94 (568)
T ss_pred HHHHHHHHHHHHHhhhcchhhhhcchhhhhHhhcccccceeeC--chhHHHHHHHHHHHHcchH---HHHHhcCCCceEe
Confidence 4444788999999999999999999999999999999999999 9999999999999988554 4777899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHHHhcCChhhhHHH
Q 010983 98 LIAVRLALGCITLSTLRFFRAQVRYKFGSQVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGFWLKGDFYAALNC 177 (496)
Q Consensus 98 ~~~~Rl~lgl~s~~~~~~~~~~i~~~~g~~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~~l~~~~~~~i~~ 177 (496)
++++|+++|++|+++|.+++++++|++|.++|+.++++++.+-+|+..||..||+||+|.++..|++.|+.+++.++++.
T Consensus 95 Fy~vR~~Lg~fsai~E~~l~~ai~~kf~~~ia~~~i~f~~fssGmF~aStafLPSSF~M~~~~~al~a~l~~n~~~av~~ 174 (568)
T KOG2515|consen 95 FYFVRLCLGFFSAIMETYLYKAICRKFGLAIARIWIIFLLFSSGMFHASTAFLPSSFAMYLTVLALGAWLTENYTKAVAY 174 (568)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceeeechhcchHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhhhhhhhhHHHHHHHHHHHHHHhccccHHH-HHHHHHHHHHHHHHHHHhhhhhhccccccchhhhhhhhhccCc-cc
Q 010983 178 LIFSAVVFRCDMVLLLCPLGLVLLLTKSISLWK-ALKCCIGMVLLSVGLTVLVDSIMWKKLVWPEFEVLWFNSVLNR-SS 255 (496)
Q Consensus 178 l~~a~vv~Rp~~a~l~~pl~l~~l~~~~~~~~~-~l~~~i~~~l~~l~~~v~iDs~fyg~~~~p~~n~~~fNv~~~~-ss 255 (496)
.+++++++||+++++.+|+.+.++..++ +++. .+.+...++++.++..+.+||+||||++..+||+++|||+.+. ++
T Consensus 175 ~a~gailGWPFsa~l~lPi~~~lll~k~-r~k~~F~~~~l~~~~~~~v~~i~~Ds~yygkl~~a~lNIv~YNV~~~~gP~ 253 (568)
T KOG2515|consen 175 VAIGAILGWPFSALLGLPILLELLLLKH-RFKSTFITWFLCILILLLVPVIVTDSYYYGKLTFAPLNIVLYNVLTGHGPN 253 (568)
T ss_pred HHHHHHhccHHHHHHhhHHHHHHHHHhc-cHHHHHHHHHHHHHHHhccceEEEeehhhccceeeeeeeEEEeeccCCCCC
Confidence 9999999999999999998877765442 2554 4455556666666667999999999999999999999999875 79
Q ss_pred cccccchHHHHHhhHhHHhhhh------HHHHHHHHhhhc-c-----cchhHHHHHHHHHHhccCCcccchhhhhhhhHH
Q 010983 256 EWGTHSFHWYFTSALPRSLLAA------YPLCFLGALLDR-R-----VLPFVIPVFTFVLLYSKLPHKELRFIISSVPIF 323 (496)
Q Consensus 256 ~yGt~P~~~Yf~~~lP~~l~~~------lpl~~~g~~~~~-r-----~~~ll~~~l~~v~v~SllpHKE~RFI~p~~Pll 323 (496)
.||||||+||+.|++.++.... .|+.++-....+ + ...++.|.++|+++++.||||||||++|++|++
T Consensus 254 iyGtEP~~yYi~NlflNfNi~~~lA~~~~p~~li~~l~~w~~~dsl~~p~~isp~yiWl~iF~~QPHKEERFLyPIYPlI 333 (568)
T KOG2515|consen 254 IYGTEPWYYYIINLFLNFNIVFLLAMLLGPFLLIYFLRVWPKWDSLALPVVISPMYIWLAIFFIQPHKEERFLYPIYPLI 333 (568)
T ss_pred ccccCchHHHHHhhhccccHHHHHHHHhchHHHHHHHhhhhhhhccCCceehhHHHHHHHHHhcCccchhhhhccchHHH
Confidence 9999999999999987754322 232222222111 1 123556999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhh--cchh-H---H-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCch-HHHHHHHHhccCCCCCCcee
Q 010983 324 NLSAAVAASRIFMN--RKKA-F---W-KLLSIILIGFLLISLGCTAVTFMASYENYPSG-YALKYLHQIGHLASNTEEQW 395 (496)
Q Consensus 324 ~l~aA~~~~~l~~~--~~k~-~---~-~~~~~~~~~~~~~~~~~s~~~~~~s~~NYpgg-~al~~lh~~~~~~~~~~~~~ 395 (496)
++.||++++...+. |+++ . . .....+.++++++..+.|.+++++...||.++ |.+.+++++.++++..+ .
T Consensus 334 ~l~aaiald~~~~lf~~k~s~~~~~~~~~~~~i~l~v~~~~~~ls~SR~~Al~nnY~aPl~vY~~l~~~~t~~~~~~--~ 411 (568)
T KOG2515|consen 334 CLSAAIALDAVLRLFLRKLSSRESHYVTLSKFIALLVLLIIACLSMSRIVALVNNYHAPLEVYPELSSLNTDGTKAP--P 411 (568)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcCCCCCC--c
Confidence 99999999977653 2222 1 1 12223444455666778999999999999999 99999999987654333 5
Q ss_pred EEeecCCCCCccccc
Q 010983 396 VHIDPYSAMNGISRF 410 (496)
Q Consensus 396 vhid~~a~~tGvsrF 410 (496)
|.+|+.- .--||
T Consensus 412 ~nVCvGk---EWhRf 423 (568)
T KOG2515|consen 412 VNVCVGK---EWHRF 423 (568)
T ss_pred eeeeeCc---ccccC
Confidence 7777764 44454
No 5
>KOG1771 consensus GPI-alpha-mannosyltransferase III (GPI10/PIG-B) involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.8e-51 Score=412.15 Aligned_cols=285 Identities=24% Similarity=0.367 Sum_probs=241.2
Q ss_pred HHHHHHHHHHhCCCCCCCCccccHHHHHHHhccCcccccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhCCCchHHH
Q 010983 19 LGLIATFYVLAMPYTKVEESFNVQAMHDILYHRHHLDIYDHLEFPGVVPRTFIGALLVSVLASPIILVMSFLHLPKTHGL 98 (496)
Q Consensus 19 l~~~~~~~~~~~pyt~~DEsFn~~e~h~~L~~g~g~~~we~~~fPg~~~RSfi~pll~a~~~~P~~~l~~~lg~~~~~~~ 98 (496)
+.+-.+-+++...|..|||.||+.|++|...+|+|.-||||. . ++||+++|++++.++| +++++|+|+....
T Consensus 11 LafR~~na~lvqT~f~pDE~wQsLEvaH~~~F~YGylTWEW~--~--giRSyl~Plifa~lYk----ll~ll~lds~~~~ 82 (464)
T KOG1771|consen 11 LAFRVLNALLVQTFFQPDEFWQSLEVAHHFIFGYGYLTWEWT--S--GIRSYLHPLIFAALYK----LLQLLGLDSYYLL 82 (464)
T ss_pred HHHHHHHHHhhhhhcCchHHHHHHHHHHHhhhccceEEEehH--h--hHHHHHHHHHHHHHHH----HHHHhccCceeEE
Confidence 333345567778999999999999998888889999999999 4 4899999999999999 8899999987654
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHHHhc-CC------
Q 010983 99 -IAVRLALGCITLSTLRFFRAQVRYKFGSQVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGFWLK-GD------ 170 (496)
Q Consensus 99 -~~~Rl~lgl~s~~~~~~~~~~i~~~~g~~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~~l~-~~------ 170 (496)
.+||. | ++|.++++++++...|..+||+.|++|+.|+.+|+++|.. |+
T Consensus 83 i~aPr~--------------~----------~~w~lf~~l~s~fn~y~~trtl~nt~etvLT~ialyY~p~~g~~si~~~ 138 (464)
T KOG1771|consen 83 INAPRY--------------R----------AKWALFCSLVSWFNAYVGTRTLSNTLETVLTSIALYYFPWYGKYSISSS 138 (464)
T ss_pred EEcchh--------------h----------hHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHhhhheeccccccccccch
Confidence 48991 1 7899999999999999999999999999999999999975 21
Q ss_pred hhhhHHHhHhhhhhhhhhHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhhhhhhh
Q 010983 171 FYAALNCLIFSAVVFRCDMVLLLCPLGLVLLLTKSI-SLWKALKCCIGMVLLSVGLTVLVDSIMWKKLVWPEFEVLWFNS 249 (496)
Q Consensus 171 ~~~~i~~l~~a~vv~Rp~~a~l~~pl~l~~l~~~~~-~~~~~l~~~i~~~l~~l~~~v~iDs~fyg~~~~p~~n~~~fNv 249 (496)
........++.+|+.||+++++|.|..+..+...+. ....+....++.+.++++.++++|.++||++++|+.|+++||+
T Consensus 139 ~~~~~l~vaalac~iRPta~lIW~~~l~~~l~~s~~~vldlI~~s~v~~gflvlg~g~liDr~~yg~~~f~~~~FlkFNv 218 (464)
T KOG1771|consen 139 SSTKYLSVAALACFIRPTAALIWLPPLLLHLVASPQPVLDLILFSFVLIGFLVLGLGILIDRIFYGQWVFPPFNFLKFNV 218 (464)
T ss_pred hhHHHHHHHHHHHHhcccceeEehhHHHHHHhcCCccchhHHhhHHHHHHHHHHhHHHHHHHHHhcceeecchhhEEEee
Confidence 112223344456788999999999999888876544 2333445567777899999999999999999999999999999
Q ss_pred ccCccccccccchHHHHHhhHhHHhhhhHHHHHHHHhhhcc----cchhHHHHHHHHHHhccCCcccchhhhhhhhHHHH
Q 010983 250 VLNRSSEWGTHSFHWYFTSALPRSLLAAYPLCFLGALLDRR----VLPFVIPVFTFVLLYSKLPHKELRFIISSVPIFNL 325 (496)
Q Consensus 250 ~~~~ss~yGt~P~~~Yf~~~lP~~l~~~lpl~~~g~~~~~r----~~~ll~~~l~~v~v~SllpHKE~RFI~p~~Pll~l 325 (496)
.+|.|+.||+|||||||+|++|..++..+|+.+.|+....+ .++++..++..+++||++||||.||++|+.|++++
T Consensus 219 ~~~lssfYG~hPWHwYfsqglPvVLg~~~pffI~Gl~~~~~~rp~~l~ll~tIl~~L~VySlL~HKEfRFv~PilPl~li 298 (464)
T KOG1771|consen 219 TQGLSSFYGVHPWHWYFSQGLPVVLGTFLPFFIFGLLLPNKKRPSLLQLLATILLTLLVYSLLPHKEFRFVLPILPLLLI 298 (464)
T ss_pred ecCcccccCCCceeeeeccccHHHHhccchHHHHHhhccccCCcchhhhHHHHHHHHHHHHhcCccceeeeechHHHHHH
Confidence 99999999999999999999999999999999999876432 23556666677999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 010983 326 SAAVAASRIF 335 (496)
Q Consensus 326 ~aA~~~~~l~ 335 (496)
.|+.+++++-
T Consensus 299 ~ag~afs~l~ 308 (464)
T KOG1771|consen 299 FAGYAFSSLK 308 (464)
T ss_pred HHhHHHHhhh
Confidence 9999999773
No 6
>KOG4123 consensus Putative alpha 1,2 mannosyltransferase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.7e-31 Score=270.34 Aligned_cols=312 Identities=16% Similarity=0.175 Sum_probs=220.5
Q ss_pred HHHHHHHHHHHH--HHHHHHHHHhCCCCCCCCccccHHH-HHHHhccCcccccccCCCCCCCchhhHHHHHHHHHHHHHH
Q 010983 8 KFLKIYGYDIVL--GLIATFYVLAMPYTKVEESFNVQAM-HDILYHRHHLDIYDHLEFPGVVPRTFIGALLVSVLASPII 84 (496)
Q Consensus 8 ~~~~~~~~~~ll--~~~~~~~~~~~pyt~~DEsFn~~e~-h~~L~~g~g~~~we~~~fPg~~~RSfi~pll~a~~~~P~~ 84 (496)
++.+|+..-..+ +.+.+......+|.||||.||+-|+ +.-.++..+.-+||+. +....| .++|+.+.. .|..
T Consensus 3 ~~~~~r~~y~~ll~lrill~f~pg~sYiHPDEhfQs~Eima~d~fgvk~trpWEF~--~k~p~R-sv~Plll~~--~P~F 77 (550)
T KOG4123|consen 3 KNRKMRIIYTFLLILRILLMFCPGPSYIHPDEHFQSFEIMAMDFFGVKGTRPWEFK--SKFPAR-SVGPLLLML--GPIF 77 (550)
T ss_pred cchhHHHHHHHHHHHHHHHHhcCCCCccChhhhhhhHHHHHHHHhccceecceeec--CCCccc-eehhHHHHh--ccHH
Confidence 344444433333 3344677788899999999999555 5555667788899998 555689 556765544 3655
Q ss_pred HHHHhh---C-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH-HHHHhhhHHHHhcCCccchhHHHHHH
Q 010983 85 LVMSFL---H-LPKTHGLIAVRLALGCITLSTLRFFRAQVRYKFGSQVEAFFV-ILTAFQFHLLFYCTRPLPNILALGIV 159 (496)
Q Consensus 85 ~l~~~l---g-~~~~~~~~~~Rl~lgl~s~~~~~~~~~~i~~~~g~~~a~~~l-ll~~~s~~~~~~ssRtLpNsfa~~l~ 159 (496)
++++.. + .++......+|+...+++..-|..+++.+ +..| .++|.. ++..+||..+-+.|||++||+|+...
T Consensus 78 ~llr~~ce~~~~g~yallvfprl~ytlisl~~d~~i~~i~-rl~g--a~rw~allllssSyvtltfqThTFSNSIEtl~f 154 (550)
T KOG4123|consen 78 LLLRCFCEINDCGAYALLVFPRLNYTLISLCIDFLIPKII-RLEG--AARWMALLLLSSSYVTLTFQTHTFSNSIETLAF 154 (550)
T ss_pred HHHHHHHHhccCCceeeeehhHHHHHHHHHHHhhhhhhhc-Chhh--HHHHHHHHHHhcCceeEEEeeeecccHHHHHHH
Confidence 555543 2 23355567899999999999999999854 4555 566654 46778899999999999999999988
Q ss_pred HHHHHHHhc----C-----ChhhhH--HHhHhhhhhhhhhHHHHHHHHHHHHHHh---cc-ccHHHH---HHHHHHHHHH
Q 010983 160 NLAYGFWLK----G-----DFYAAL--NCLIFSAVVFRCDMVLLLCPLGLVLLLT---KS-ISLWKA---LKCCIGMVLL 221 (496)
Q Consensus 160 ~~al~~~l~----~-----~~~~~i--~~l~~a~vv~Rp~~a~l~~pl~l~~l~~---~~-~~~~~~---l~~~i~~~l~ 221 (496)
.+-+-..-+ + +..++. ..+.++|++.|||...+.++.++.+..| ++ .+++.+ +..-..++..
T Consensus 155 ~wtL~lvs~~v~~~~~~~s~r~rswlLg~I~vaGvFnRpTFlaF~~~p~~~w~~Rg~~~~~~~~Kdf~l~ll~f~~~a~~ 234 (550)
T KOG4123|consen 155 FWTLLLVSDLVNEKLIKKSNRKRSWLLGIIFVAGVFNRPTFLAFIFAPCIIWFVRGFKKHVNNPKDFFLHLLIFSSVAFA 234 (550)
T ss_pred HHHHHHHHHHhcccccCcchHHHHHHhhhheeeeecccchHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHhhhHHH
Confidence 776654432 1 111222 2345678999999766666555555544 22 134432 2233445667
Q ss_pred HHHHHHhhhhhhcc--c-cccchhhhhhhhhccCccccccccchHHHHHhhHhHHhhhhHHHHHHHHhhhccc-chhHHH
Q 010983 222 SVGLTVLVDSIMWK--K-LVWPEFEVLWFNSVLNRSSEWGTHSFHWYFTSALPRSLLAAYPLCFLGALLDRRV-LPFVIP 297 (496)
Q Consensus 222 ~l~~~v~iDs~fyg--~-~~~p~~n~~~fNv~~~~ss~yGt~P~~~Yf~~~lP~~l~~~lpl~~~g~~~~~r~-~~ll~~ 297 (496)
++++.+..||.||| + ++++|||+++||....+-+.+|+||.+.++..++|.+.+ |++.......... +.....
T Consensus 235 t~~lfil~Ds~yy~~~~nfViTpwNnLkyNln~qnla~HGlHprytHl~vNmplLfg---p~l~a~~q~~~~~rkl~t~a 311 (550)
T KOG4123|consen 235 TSCLFILEDSKYYGNGKNFVITPWNNLKYNLNIQNLAQHGLHPRYTHLFVNMPLLFG---PLLFAAIQKGWDLRKLATWA 311 (550)
T ss_pred HhhHhheechhhhcCCCcEEEeehhhhhhcCCHHHHHhcCcchhHHHHHhcchHHhh---HHHHHHHHHHhhhhhhhhHH
Confidence 78889999999999 5 899999999999998999999999999999999999877 3333222211111 223345
Q ss_pred HHHHHHHhccCCcccchhhhhhhhHHHHHHHHH
Q 010983 298 VFTFVLLYSKLPHKELRFIISSVPIFNLSAAVA 330 (496)
Q Consensus 298 ~l~~v~v~SllpHKE~RFI~p~~Pll~l~aA~~ 330 (496)
.+.-++++|+.+|||.||++|+.|++.+..+-.
T Consensus 312 if~plffLSlf~HQEpRFLlPl~~pliln~~p~ 344 (550)
T KOG4123|consen 312 IFLPLFFLSLFPHQEPRFLLPLAPPLILNLGPT 344 (550)
T ss_pred HHHHHHHHHhccccCcchhhcchhHHHhhcCCc
Confidence 567789999999999999999999988887763
No 7
>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional
Probab=99.13 E-value=1.4e-07 Score=103.54 Aligned_cols=299 Identities=11% Similarity=-0.031 Sum_probs=147.5
Q ss_pred HHHHhCCCCCCCCccccHHHHHHHhccCcccccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 010983 25 FYVLAMPYTKVEESFNVQAMHDILYHRHHLDIYDHLEFPGVVPRTFIGALLVSVLASPIILVMSFLHLPKTHGLIAVRLA 104 (496)
Q Consensus 25 ~~~~~~pyt~~DEsFn~~e~h~~L~~g~g~~~we~~~fPg~~~RSfi~pll~a~~~~P~~~l~~~lg~~~~~~~~~~Rl~ 104 (496)
..+...+..++||....+...+++-+|+-+.+.- -| .++---+|+.++...- ..+.+|.+. ..+|+.
T Consensus 21 l~L~~r~lw~~DE~ryA~iareMl~sGdWlvP~~----~g-~~y~eKPPL~yWl~Al----s~~LFG~~~----~a~RLp 87 (552)
T PRK13279 21 LPLNTRLLWQPDETRYAEISREMLASGDWIVPHF----LG-LRYFEKPIAGYWINSI----GQWLFGDNN----FGVRFG 87 (552)
T ss_pred HHhcCCCCCCCchHHHHHHHHHHHHhCCcCcccc----CC-CcCCCCCcHHHHHHHH----HHHHcCCCc----HHHHHH
Confidence 3344567789999988888888886664332211 11 0111122333332211 234567543 568998
Q ss_pred HHHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHH---HHHHhcCC--hhh--hHH
Q 010983 105 LGCITLSTLRFFRAQVRYKFG-SQVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLA---YGFWLKGD--FYA--ALN 176 (496)
Q Consensus 105 lgl~s~~~~~~~~~~i~~~~g-~~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~a---l~~~l~~~--~~~--~i~ 176 (496)
.++.+.++....+...++.++ ++.|.+..++.++++.....+.-...+.+-+.+++.+ ++...+.+ .++ ...
T Consensus 88 saL~~~lt~llvy~larrl~~~r~~AllAaLIlls~~~v~~~g~~a~~D~~l~~fi~lal~~f~~~~~~~~~~~~~~~~l 167 (552)
T PRK13279 88 SVFSTLLSALLVYWLALRLWRDRRTALLAALIYLSLFLVYGIGTYAVLDPMITLWLTAAMCSFWLALQAQTRRGKIGGYL 167 (552)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcccccchHHHHH
Confidence 888888888888887777775 4567777777777766554433233343333333333 33333321 112 111
Q ss_pred HhH---hhhhhhhhhHHHHH--HHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhhhhhhccccccch-hhhh--hhh
Q 010983 177 CLI---FSAVVFRCDMVLLL--CPLGLVLLLTKSISLWKALKCCIGMVLLSVGLTVLVDSIMWKKLVWPE-FEVL--WFN 248 (496)
Q Consensus 177 ~l~---~a~vv~Rp~~a~l~--~pl~l~~l~~~~~~~~~~l~~~i~~~l~~l~~~v~iDs~fyg~~~~p~-~n~~--~fN 248 (496)
.++ ..++...-..+++. +.++.+.+.+|| +++....+..+.+++++++. =.+.+-..--|+ ++.+ .-|
T Consensus 168 llGla~Glg~LTKG~ial~lP~l~il~~ll~~rr--~~~ll~~~~l~llvalli~l--PW~lai~~~~pdf~~~ff~~e~ 243 (552)
T PRK13279 168 LLGLACGMGFMTKGFLALAVPVISVLPWVIWQKR--WKELLIYGPLAVLSAVLVSL--PWALAIAQREPDFWHYFFWVEH 243 (552)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhhh--HHHHHHHHHHHHHHHHHHHH--HHHHHHHHhCchHHHHHHHHHH
Confidence 111 11234444333322 122234444444 44433322222222221111 111110000121 1111 122
Q ss_pred hcc-CccccccccchHHHHHhhHhHHhhhh---HHHHHHHHhhhccc--ch--hHHHHHHHHHHhccCCcccchhhhhhh
Q 010983 249 SVL-NRSSEWGTHSFHWYFTSALPRSLLAA---YPLCFLGALLDRRV--LP--FVIPVFTFVLLYSKLPHKELRFIISSV 320 (496)
Q Consensus 249 v~~-~~ss~yGt~P~~~Yf~~~lP~~l~~~---lpl~~~g~~~~~r~--~~--ll~~~l~~v~v~SllpHKE~RFI~p~~ 320 (496)
+-. ..++.-..+|++||+.+.+-. ..+. +|..+...+.+||. .. ++.-.+..++++|+.+.|..++++|++
T Consensus 244 i~Rf~~~~~~h~~p~~yYl~~ll~~-~lPW~~llp~al~~~w~~r~~~~~~~fll~W~~~~llfFSis~~Kl~~YiLP~~ 322 (552)
T PRK13279 244 IQRFAEDDAQHKAPFWYYLPVLIAG-SLPWLGLLPGALKQGWRERKKHPGTFYLLLWVVMPLLFFSIAKGKLPTYILPCF 322 (552)
T ss_pred HHHHhcccccCCCCceehHHHHHHH-HHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHheeeeeCCCcchhHHHHH
Confidence 211 011222357999987754321 1222 23333333333321 11 222334577899999999999999999
Q ss_pred hHHHHHHHHHHHHHhhhcchh
Q 010983 321 PIFNLSAAVAASRIFMNRKKA 341 (496)
Q Consensus 321 Pll~l~aA~~~~~l~~~~~k~ 341 (496)
|.+.+.+|..+.++.++.+.+
T Consensus 323 pplAlL~A~~l~~~~~~~~~~ 343 (552)
T PRK13279 323 APLAILMAHYAVDCAKNGNPR 343 (552)
T ss_pred HHHHHHHHHHHHHHhhhcchH
Confidence 999999999999887653333
No 8
>TIGR03663 conserved hypothetical protein TIGR03663. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.
Probab=99.13 E-value=1.2e-07 Score=101.56 Aligned_cols=283 Identities=20% Similarity=0.261 Sum_probs=154.8
Q ss_pred CCCCCCCCccccHHHHHHHhccCcccccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHH
Q 010983 30 MPYTKVEESFNVQAMHDILYHRHHLDIYDHLEFPGVVPRTFIGALLVSVLASPIILVMSFLHLPKTHGLIAVRLALGCIT 109 (496)
Q Consensus 30 ~pyt~~DEsFn~~e~h~~L~~g~g~~~we~~~fPg~~~RSfi~pll~a~~~~P~~~l~~~lg~~~~~~~~~~Rl~lgl~s 109 (496)
.+..+.||...-+..-+++-.| +|.|. | + +=+|++...... ..+.+|.+. ...|+..++++
T Consensus 21 ~~~~~~DEa~ya~~a~~ml~~g----~~~~~--p----~-~h~Pll~wl~A~----~~~lFG~se----~a~RL~~aL~g 81 (439)
T TIGR03663 21 LRVFHHDEAIHASFILKLLETG----VYSYD--P----A-YHGPFLYHITAA----VFHLFGISD----ATARLLPAVFG 81 (439)
T ss_pred CCCCCCCchhHHHHHHHHHhcC----CCCcC--C----C-CCCCHHHHHHHH----HHHHhCCCH----HHHHHHHHHHH
Confidence 4557999999877666666433 23332 2 2 224655544333 345677653 47899888888
Q ss_pred HHHHHHHHHHHHHHhCchHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHHHhc---CChhh-hHH---HhHhhh
Q 010983 110 LSTLRFFRAQVRYKFGSQVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGFWLK---GDFYA-ALN---CLIFSA 182 (496)
Q Consensus 110 ~~~~~~~~~~i~~~~g~~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~~l~---~~~~~-~i~---~l~~a~ 182 (496)
+. ....+...++.+|++.+....++.+++..+.+++--..+++..+.+++.+++.+++ ++.++ .+. .+++ +
T Consensus 82 ~~-v~l~~~~~r~~~~~~~al~AAllla~sp~~~~~sr~~~~D~~l~~f~~lal~~l~r~~~~~~~~~~~lag~~~gL-a 159 (439)
T TIGR03663 82 VL-LPLTAWLYRKRLGDNEVLWAAVLLAFSPVMVYYSRFMRNDIFVAFFTLLAVGAAFRYLDTGKRRYLFLAASALAL-A 159 (439)
T ss_pred HH-HHHHHHHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH-H
Confidence 44 34455556678898888888888888888877776667778888888887776654 22222 221 2222 3
Q ss_pred hhhhhhHHHHHH----HHHHHHHHh-----------ccc-cHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhhhh
Q 010983 183 VVFRCDMVLLLC----PLGLVLLLT-----------KSI-SLWKALKCCIGMVLLSVGLTVLVDSIMWKKLVWPEFEVLW 246 (496)
Q Consensus 183 vv~Rp~~a~l~~----pl~l~~l~~-----------~~~-~~~~~l~~~i~~~l~~l~~~v~iDs~fyg~~~~p~~n~~~ 246 (496)
+......++..+ .+.++...+ |+. ++.+.....+.++.+.+++... +|-+-..-|+ ++
T Consensus 160 ~ltKg~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~w~~~~~~~~~~~~~i~~~---~y~~~~~~p~-~~-- 233 (439)
T TIGR03663 160 FTSKENAYLIILIFGGLLAIYLDWKKERAGARETLTRKRSLFWRWLRDLIGSVAVFAAIIMF---FYTSLFRHPE-RL-- 233 (439)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhHHHHHHHHHHHHHHHHHHH---HHHHHhcChH-HH--
Confidence 444555443222 233333332 111 1111111112222222222222 2212122222 11
Q ss_pred hhhcc------------CccccccccchHHHHHhhHhHHhhhhH---HHHHHHHhhhc-----ccchhHHH---HHHHHH
Q 010983 247 FNSVL------------NRSSEWGTHSFHWYFTSALPRSLLAAY---PLCFLGALLDR-----RVLPFVIP---VFTFVL 303 (496)
Q Consensus 247 fNv~~------------~~ss~yGt~P~~~Yf~~~lP~~l~~~l---pl~~~g~~~~~-----r~~~ll~~---~l~~v~ 303 (496)
+++.+ .+..+.+..||+||+...+ ....+.+ |..+.+.+.+| +.+....+ .+..++
T Consensus 234 ~~i~~~~~~~~~~~w~~~~~~~~~~~P~~yy~~~ll-~~~~P~~~~~~~~l~~~~~~r~~~~~~~~~~~f~~~W~~~~~v 312 (439)
T TIGR03663 234 FSIVEAGTIKAVEHWASMHRIARIYGPFYYYLPILL-LYELPALIFAAAGVLGFLANRYATDKRRSFFLFACYWTLASLL 312 (439)
T ss_pred HHHHHhhhhhHHHHHhhccccCCCCCChHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence 12221 1222334569999966543 2111111 22233334333 11222222 345678
Q ss_pred HhccCCcccchhhhhhhhHHHHHHHHHHHHHhhhcch
Q 010983 304 LYSKLPHKELRFIISSVPIFNLSAAVAASRIFMNRKK 340 (496)
Q Consensus 304 v~SllpHKE~RFI~p~~Pll~l~aA~~~~~l~~~~~k 340 (496)
+||..+.|=...++|++|.+.+.||.+++++.++.++
T Consensus 313 ~ys~~~~K~Pwy~l~~~~PlAll~g~~l~~~~~~~~~ 349 (439)
T TIGR03663 313 FYSYIQEKVPWLVVHILVPLAILAAVGLSAVVLTGKK 349 (439)
T ss_pred HHhhcccCCcchhHHHHHhHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999875554
No 9
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=98.65 E-value=7.7e-05 Score=80.41 Aligned_cols=102 Identities=12% Similarity=0.078 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHhhhHHHHh-cCCccchhHHHHHHHHHHHHHhcCChhhhHHHhHh
Q 010983 103 LALGCITLSTLRFFRAQVRYKF-GSQVEAFFVILTAFQFHLLFY-CTRPLPNILALGIVNLAYGFWLKGDFYAALNCLIF 180 (496)
Q Consensus 103 l~lgl~s~~~~~~~~~~i~~~~-g~~~a~~~lll~~~s~~~~~~-ssRtLpNsfa~~l~~~al~~~l~~~~~~~i~~l~~ 180 (496)
++|+++-+.+-.-+++..+++. +...+....+..+.++..... .--..|+++++++..+++..+.++|++.++.+.+.
T Consensus 64 i~Qal~la~~~~pl~~lar~~~~~~~~a~~~~~~ylL~p~~~~~~~~dFH~~~~avPll~~~~~~~~~~r~~~~~~~~ll 143 (449)
T PF09852_consen 64 IVQALLLALGAIPLYRLARRRLLSRRLALLIALAYLLSPGLQGANLFDFHPVAFAVPLLLWALYALERRRWRLFILWALL 143 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhHHHHhhhhCCCcHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 4456666666666676666665 566777777777777666543 34678999999999999997778887776665444
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhcc
Q 010983 181 SAVVFRCDMVLLLCPLGLVLLLTKS 205 (496)
Q Consensus 181 a~vv~Rp~~a~l~~pl~l~~l~~~~ 205 (496)
.+..+-+.++.++.++++.++++|
T Consensus 144 -~llvKEd~~l~v~~~gl~~~~~~r 167 (449)
T PF09852_consen 144 -LLLVKEDLGLTVAGIGLYLLLRRR 167 (449)
T ss_pred -HHHHHhhHHHHHHHHHHHHHHhCc
Confidence 355699999999999999988764
No 10
>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]
Probab=98.24 E-value=0.0038 Score=68.63 Aligned_cols=128 Identities=11% Similarity=0.000 Sum_probs=88.9
Q ss_pred HhCCCCCCCCccccHHHHHHHhccCcccccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHH
Q 010983 28 LAMPYTKVEESFNVQAMHDILYHRHHLDIYDHLEFPGVVPRTFIGALLVSVLASPIILVMSFLHLPKTHGLIAVRLALGC 107 (496)
Q Consensus 28 ~~~pyt~~DEsFn~~e~h~~L~~g~g~~~we~~~fPg~~~RSfi~pll~a~~~~P~~~l~~~lg~~~~~~~~~~Rl~lgl 107 (496)
..-+..|.||....+...++.-.|+....+... .++.--+|+.++..+- ...++|.+ -...|+...+
T Consensus 26 ~~~~~~~~de~~~~~~~~~m~~s~~w~~~~~~g-----~~~~~kPPl~~Wl~a~----~~~lfG~~----~~~~rl~~~l 92 (535)
T COG1807 26 GSRPLWDPDEARYAEIAREMLESGDWFTPQLLG-----LPYFEKPPLVYWLQAL----SYLLFGVN----EWSARLPSAL 92 (535)
T ss_pred ccCCCCCCCchhHHHHHHHHHHcCCCcceeeCC-----ccccCCCcHHHHHHHH----HHHHcCcc----hHHHHHHHHH
Confidence 334666799999999998888655544433221 1344445555554432 23356632 3567888777
Q ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHHHhc
Q 010983 108 ITLSTLRFFRAQVRYKFGSQVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGFWLK 168 (496)
Q Consensus 108 ~s~~~~~~~~~~i~~~~g~~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~~l~ 168 (496)
.++++...+|...++.+|+..|....++.++.+.....+.+-.+++.-+.++++++....+
T Consensus 93 ~~~~~~~l~y~l~k~l~~~~~a~~aali~~~~p~~~~~~~~~~~D~~l~~f~~la~~~~~~ 153 (535)
T COG1807 93 AGALTALLVYWLAKRLFGRLAALLAALILLLTPLFFLIGRLALLDAALAFFLTLALALLYL 153 (535)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHH
Confidence 7777777777777777887788888889999999999999999998888888877766553
No 11
>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase
Probab=97.70 E-value=0.0033 Score=56.75 Aligned_cols=119 Identities=24% Similarity=0.267 Sum_probs=86.3
Q ss_pred HHhhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHHH
Q 010983 87 MSFLHLPKTHGLIAVRLALGCITLSTLRFFRAQVRYKFGSQVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGFW 166 (496)
Q Consensus 87 ~~~lg~~~~~~~~~~Rl~lgl~s~~~~~~~~~~i~~~~g~~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~~ 166 (496)
.+.+|.+ ....|+...+++.++...+++..++.+|++.+....++.+..+....++....+++..+.+..++++..
T Consensus 14 ~~l~G~~----~~~~~~~~~l~~~~~~~~~y~i~r~~~~~~~a~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (159)
T PF13231_consen 14 FKLFGDS----VWALRLFNILFSLLTLLLIYLIARRLFGRRAALIAALLLALSPMFIFYSASARPDMLLLFFFLLALYAF 89 (159)
T ss_pred HHHhCcC----HHHHHHHHHHHHHHHHHHHHHHHHHHCCchHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3455642 356788899999999999999888888888888888888888888888888888999999999888877
Q ss_pred hc---C-ChhhhHH--HhHhhhhhhhhhHHHHHHHHHHHHHHhccccHHH
Q 010983 167 LK---G-DFYAALN--CLIFSAVVFRCDMVLLLCPLGLVLLLTKSISLWK 210 (496)
Q Consensus 167 l~---~-~~~~~i~--~l~~a~vv~Rp~~a~l~~pl~l~~l~~~~~~~~~ 210 (496)
.+ + +.+..+. .+...+...|++..++..++.++.+.+++ ++++
T Consensus 90 ~~~~~~~~~~~~~~~~l~~~l~~~~k~~~~~~~~~~~~~l~~~~~-~~~~ 138 (159)
T PF13231_consen 90 YRYIKSKKWRWWILAGLLLGLAFLTKYTFLLLIPALLLYLLLSRR-RLKR 138 (159)
T ss_pred HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH-HHHh
Confidence 64 2 2222221 22333467799988887777776666544 4544
No 12
>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=97.22 E-value=0.023 Score=61.31 Aligned_cols=168 Identities=19% Similarity=0.187 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHhC-chHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHHHhcCChhhhHHHhHhhhhhhhhhH
Q 010983 111 STLRFFRAQVRYKFG-SQVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGFWLKGDFYAALNCLIFSAVVFRCDM 189 (496)
Q Consensus 111 ~~~~~~~~~i~~~~g-~~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~~l~~~~~~~i~~l~~a~vv~Rp~~ 189 (496)
++...+++..++.++ ++.+....++.+.++...| .+...+|++-+.++..|++...++++-.+..+.++++. .|+.-
T Consensus 125 la~~~L~~l~~~~~~~~~~a~~a~ll~~~~PasiF-~sa~YsEslf~~lsf~gl~~~~~~~~~~a~~~~~la~~-~RsnG 202 (443)
T PF04188_consen 125 LAAVALYRLTRRVFKSRKLALLAALLFIFSPASIF-LSAPYSESLFALLSFAGLYLLERGRWWLAGLLFALATL-TRSNG 202 (443)
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHccHHHH-hhcCccHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH-HHhhH
Confidence 445556666555553 4566666666666666544 47899999999999999998888886666666666655 69887
Q ss_pred HHHHHHHHHHHHHh-------ccc--cHHHHHHHHHHHHHHHHHHHHhhhhhhccccccch-------hh----hhhhhh
Q 010983 190 VLLLCPLGLVLLLT-------KSI--SLWKALKCCIGMVLLSVGLTVLVDSIMWKKLVWPE-------FE----VLWFNS 249 (496)
Q Consensus 190 a~l~~pl~l~~l~~-------~~~--~~~~~l~~~i~~~l~~l~~~v~iDs~fyg~~~~p~-------~n----~~~fNv 249 (496)
.+..+++....+.. ++. +..+.+...+..+++..+..+....+-|.+.+-+. |- -..|+-
T Consensus 203 ll~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~~i~~pf~~~q~~~y~~fC~~~~~~~~~~WC~~~~P~~Ys~ 282 (443)
T PF04188_consen 203 LLLAGFFAYELLGIYYLDLRQLRRQRRLVRALISAILSGLLIFLPFVLFQYYAYYRFCPPRSFGDEPPWCNNTIPSIYSF 282 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCchhhhccCccchHH
Confidence 76666665543321 111 11122223344455556667777777776654443 11 124555
Q ss_pred ccCccccccccchHHHHHhhHhHHhhhhHHHHHH
Q 010983 250 VLNRSSEWGTHSFHWYFTSALPRSLLAAYPLCFL 283 (496)
Q Consensus 250 ~~~~ss~yGt~P~~~Yf~~~lP~~l~~~lpl~~~ 283 (496)
+| +..|++--+-||=.+.+|++++ ++|.+.+
T Consensus 283 vQ--~~YWnvGfl~Yw~~~niPnFll-a~P~~~l 313 (443)
T PF04188_consen 283 VQ--SHYWNVGFLRYWTLKNIPNFLL-ALPMLLL 313 (443)
T ss_pred HH--HHHHccchHHhccccccchHHH-HHHHHHH
Confidence 54 6789999888887788999854 5565443
No 13
>TIGR03766 conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.
Probab=96.43 E-value=1.8 Score=47.30 Aligned_cols=114 Identities=13% Similarity=0.128 Sum_probs=78.9
Q ss_pred HHHhhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHH
Q 010983 86 VMSFLHLPKTHGLIAVRLALGCITLSTLRFFRAQVRYKFGSQVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGF 165 (496)
Q Consensus 86 l~~~lg~~~~~~~~~~Rl~lgl~s~~~~~~~~~~i~~~~g~~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~ 165 (496)
+.+.+|.+. ..+.+++..+++..+....++..++.+|++.|++..++++..+....|..=+.+++..+.++.+++..
T Consensus 129 l~kifg~~~---~~~~~llNil~~~~si~liy~i~k~lf~~~~a~~a~~l~~l~~~~~~y~~~~Ysd~~~l~~~~l~l~~ 205 (483)
T TIGR03766 129 LYKLFGETS---WLFFDVVNIVLVDLSALILYKAVKKVFNKKKAFVALYLFVLLLALSPYILIPYTDTWVLPFVSLFLFL 205 (483)
T ss_pred HHHHhCccH---HHHHHHHHHHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 445677543 33457777777888888888888889999999998888888877777777788888888888777653
Q ss_pred Hh---cCCh-h-h---hHH--HhHhhhhhhhhhHHHHHHHHHHHHHH
Q 010983 166 WL---KGDF-Y-A---ALN--CLIFSAVVFRCDMVLLLCPLGLVLLL 202 (496)
Q Consensus 166 ~l---~~~~-~-~---~i~--~l~~a~vv~Rp~~a~l~~pl~l~~l~ 202 (496)
.. +.+. + + ++. .+...+..+||...++...+.++.++
T Consensus 206 ~~~~~~~~~~~~~~~~~Il~gillal~~~iKp~~iI~liA~~i~~~l 252 (483)
T TIGR03766 206 YTVISKKTDLRKKIALSILLGVLLAIAYFIKPSAIIFVIAIFIVLFL 252 (483)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 32 2221 1 1 121 12233567899988887777777655
No 14
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=96.16 E-value=3.7 Score=47.72 Aligned_cols=26 Identities=15% Similarity=0.083 Sum_probs=22.3
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHhhh
Q 010983 312 ELRFIISSVPIFNLSAAVAASRIFMN 337 (496)
Q Consensus 312 E~RFI~p~~Pll~l~aA~~~~~l~~~ 337 (496)
-.||.+...+++.++++.++.++.+.
T Consensus 338 ~~R~~fi~~f~~~~~~~~~l~~~~~~ 363 (843)
T PF09586_consen 338 PYRWSFIFIFLISLLAARGLEELKKI 363 (843)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 48999999999999999999977554
No 15
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=95.59 E-value=5.4 Score=45.09 Aligned_cols=26 Identities=23% Similarity=0.280 Sum_probs=21.5
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHhhh
Q 010983 312 ELRFIISSVPIFNLSAAVAASRIFMN 337 (496)
Q Consensus 312 E~RFI~p~~Pll~l~aA~~~~~l~~~ 337 (496)
=+||+..+.|++.+.+|..+.+..++
T Consensus 257 p~RFl~i~~~~~~ll~a~~~~~~~~k 282 (616)
T PF10131_consen 257 PWRFLSIASVFLALLGALLLWRILKK 282 (616)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 39999999999999999888776644
No 16
>PF09913 DUF2142: Predicted membrane protein (DUF2142); InterPro: IPR018674 This family of conserved hypothetical proteins has no known function.
Probab=94.75 E-value=2.3 Score=44.72 Aligned_cols=79 Identities=15% Similarity=0.028 Sum_probs=59.2
Q ss_pred HHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHH
Q 010983 84 ILVMSFLHLPKTHGLIAVRLALGCITLSTLRFFRAQVRYKFGSQVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAY 163 (496)
Q Consensus 84 ~~l~~~lg~~~~~~~~~~Rl~lgl~s~~~~~~~~~~i~~~~g~~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al 163 (496)
.++.+.++.+.....++.|++-.++.++..+...|... .+++.+++.+..+-..+.++-.-+++++..++.+.+
T Consensus 107 i~ig~ll~l~~~~~~~l~Rl~nll~~~~l~~~Ai~~~p------~~k~l~~~i~l~Pm~~~~~aS~s~D~~~~~~~~l~~ 180 (389)
T PF09913_consen 107 IWIGRLLGLSVLVMYYLGRLFNLLLYALLVYLAIKLAP------RGKWLLALIALLPMTLFQAASVSYDGLIIALAFLFI 180 (389)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc------hhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 34677888888888899999999888877666555432 223445566677777888888888899988888888
Q ss_pred HHHhc
Q 010983 164 GFWLK 168 (496)
Q Consensus 164 ~~~l~ 168 (496)
+++++
T Consensus 181 a~~l~ 185 (389)
T PF09913_consen 181 ALLLR 185 (389)
T ss_pred HHHHH
Confidence 87776
No 17
>COG5542 Predicted integral membrane protein [Function unknown]
Probab=94.38 E-value=4.5 Score=43.07 Aligned_cols=170 Identities=16% Similarity=0.168 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCc-hHHHHHHHHHHhhhHHHHhcCCcc--chhHHHHHHHHHHHHHhcCChhhhHH
Q 010983 100 AVRLALGCITLSTLRFFRAQVRYKFGS-QVEAFFVILTAFQFHLLFYCTRPL--PNILALGIVNLAYGFWLKGDFYAALN 176 (496)
Q Consensus 100 ~~Rl~lgl~s~~~~~~~~~~i~~~~g~-~~a~~~lll~~~s~~~~~~ssRtL--pNsfa~~l~~~al~~~l~~~~~~~i~ 176 (496)
...+..-...+.+-+.+|+..++++|. +.+++...+-.++...+|. +.-- .+|+=+.+...+++....++.-.+.+
T Consensus 118 ~~~l~s~~~~~~~ay~lY~~tk~~y~~~~~a~fa~i~~~~~P~~i~~-s~iw~~teSlf~ll~~l~iyf~~~k~~~~a~~ 196 (420)
T COG5542 118 AIKLFSNIADFVAAYFLYKITKLRYGLGSMARFATILVILSPSVIYN-SAIWGQTESLFTLLSILAIYFFSIKKQIPALF 196 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccchhhhheEEEEEeccHHHhh-hhHHhccchHHHHHHHHHHHHHHccchhHHHH
Confidence 344445555567788889989999996 7778776655555444333 3333 78888888889998777777777777
Q ss_pred HhHhhhhhhhhhHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH-----------HHhhhhhhccccccchhhhh
Q 010983 177 CLIFSAVVFRCDMVLLLCPLGLVLLLTKSISLWKALKCCIGMVLLSVGL-----------TVLVDSIMWKKLVWPEFEVL 245 (496)
Q Consensus 177 ~l~~a~vv~Rp~~a~l~~pl~l~~l~~~~~~~~~~l~~~i~~~l~~l~~-----------~v~iDs~fyg~~~~p~~n~~ 245 (496)
+.++|+ .+|++..+ +.|+.+..+++.+. ++........+++....+ ....|-++=+...++|.+..
T Consensus 197 ~faLa~-l~Rsngi~-~~p~fl~~~ik~~~-ik~i~~~l~~~~l~~~~ll~~~~~~~~~~~~~~~~y~~~~~~f~~~~~~ 273 (420)
T COG5542 197 FFALAT-LFRSNGIF-LSPLFLIPLIKNRK-IKIIWYLLPSGSLTYLSLLMPAWILGRNAFEIFLGYWRQSNGFKEQGKN 273 (420)
T ss_pred HHHHHH-HhccchhH-HHHHHHHHHHhhhh-HHHhhhhhhhHHHHHHHHHHHHHHhCccchhhhhhhhcccccchHHHhc
Confidence 777764 56998665 55666666654332 332222111122221111 12223333344688888888
Q ss_pred hhhhccCc-ccccccc-chHHHHHhhHhHHh
Q 010983 246 WFNSVLNR-SSEWGTH-SFHWYFTSALPRSL 274 (496)
Q Consensus 246 ~fNv~~~~-ss~yGt~-P~~~Yf~~~lP~~l 274 (496)
..|+-+.. ++.|++. |.+| ..+..|+++
T Consensus 274 ~~~iy~~I~~~~w~vg~~~~~-~~~~~~~~l 303 (420)
T COG5542 274 APNIYSWIPNNYWNVGLPKYW-ISNNIPNFL 303 (420)
T ss_pred chHHHHhhccceeeeeeeEEe-eccCCccHH
Confidence 99987765 4677776 4443 344556653
No 18
>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes. It is likely to be conserved between Mycobacterium species []. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=93.89 E-value=4.9 Score=38.62 Aligned_cols=51 Identities=22% Similarity=0.051 Sum_probs=34.7
Q ss_pred HHhcCCccchhHHHHHHHHHHHHHhcCChhhhHHHhHhhhhhhhhhHHHHHH
Q 010983 143 LFYCTRPLPNILALGIVNLAYGFWLKGDFYAALNCLIFSAVVFRCDMVLLLC 194 (496)
Q Consensus 143 ~~~ssRtLpNsfa~~l~~~al~~~l~~~~~~~i~~l~~a~vv~Rp~~a~l~~ 194 (496)
.......-.|.+.+.+...++..+.++|...+..++++++. .+++.+++..
T Consensus 68 ~~~~~~gq~~~l~~~l~~~a~~~~~r~r~~~agv~lgla~~-~K~~p~~~l~ 118 (241)
T PF09594_consen 68 LSALGLGQFDLLVAALLLLALLALRRGRPWLAGVLLGLAAA-IKLYPALLLP 118 (241)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH-HHHHHHHHHH
Confidence 44445556677888888888887777777667777776544 4777665544
No 19
>PF04922 DIE2_ALG10: DIE2/ALG10 family; InterPro: IPR007006 Members of this entry are glycosyltransferases, belonging to the ALG10 family. The majority of the members are annotated as alpha-1,2 glucosyltransferas. The ALG10 protein from Saccharomyces cerevisiae (Baker's yeast) encodes the alpha-1,2 glucosyltransferase of the endoplasmic reticulum. This protein has been characterised in Rat as potassium channel regulator 1 [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane
Probab=93.72 E-value=1.6 Score=46.23 Aligned_cols=148 Identities=20% Similarity=0.175 Sum_probs=83.5
Q ss_pred CCCcccc-HHHHHHHhccCcccccccCCCCCCCchhhHHHHHHHHH-HHHHHHHHHhhCCCchHHHHHHHHHHHHHHH-H
Q 010983 35 VEESFNV-QAMHDILYHRHHLDIYDHLEFPGVVPRTFIGALLVSVL-ASPIILVMSFLHLPKTHGLIAVRLALGCITL-S 111 (496)
Q Consensus 35 ~DEsFn~-~e~h~~L~~g~g~~~we~~~fPg~~~RSfi~pll~a~~-~~P~~~l~~~lg~~~~~~~~~~Rl~lgl~s~-~ 111 (496)
-||.|.. |+.+ |...+..+||-. +-|.=|.++++.. .+|... ..+.+.. ...|..-.+.+. .
T Consensus 9 mDEiFHipQaq~---YC~g~f~~WDpK------ITTpPGLYlls~~~l~~~~~---~~~~~~~---~~LR~~N~l~~~~~ 73 (379)
T PF04922_consen 9 MDEIFHIPQAQA---YCRGRFTEWDPK------ITTPPGLYLLSVAALFPGSW---FFGCSSL---SVLRSTNLLFALVV 73 (379)
T ss_pred ccchhhhHHHHH---HHhchhhhhCCc------cCCCchHHHHHHHHHhhHHH---hhcccch---HHHHHHHHHHHHHH
Confidence 4899988 6644 333456688865 5555555555544 233222 2233322 227887776665 3
Q ss_pred HHHHHHHHHHHHh--CchHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHHHhcCChhhhHHHhHhhhhhhhhhH
Q 010983 112 TLRFFRAQVRYKF--GSQVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGFWLKGDFYAALNCLIFSAVVFRCDM 189 (496)
Q Consensus 112 ~~~~~~~~i~~~~--g~~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~~l~~~~~~~i~~l~~a~vv~Rp~~ 189 (496)
.-+.+++.++.+- .+..+....+..++.+-.+|++-=...+..++.+++.++...+++++..+ .++++.++++|=|+
T Consensus 74 ~~~l~~~~~~~~~~~~~~~~~~~a~~ialfPllfFFsfLYYTDv~St~~VL~~yl~~~~~~~~~s-al~g~~sv~fRQTN 152 (379)
T PF04922_consen 74 LPWLIYRILRFLNPRRSRKAILSALNIALFPLLFFFSFLYYTDVWSTTFVLLMYLASLKRRHWLS-ALFGLLSVLFRQTN 152 (379)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhHHHHhhHHHHhcHHHHHHHHHHHHHHHcCCchHH-HHHHHHHHHHhcch
Confidence 4444444443221 11222223334445556666666667788888888888766666665543 34566778899998
Q ss_pred HHHHHHHHH
Q 010983 190 VLLLCPLGL 198 (496)
Q Consensus 190 a~l~~pl~l 198 (496)
++-.+..+.
T Consensus 153 IvWv~f~~~ 161 (379)
T PF04922_consen 153 IVWVAFFAG 161 (379)
T ss_pred HHHHHHHHH
Confidence 775544443
No 20
>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]
Probab=93.59 E-value=3.3 Score=48.01 Aligned_cols=123 Identities=16% Similarity=0.205 Sum_probs=68.6
Q ss_pred CCCCCCccccHHHHHHHhccC---cccccccCCC-CCCCchhhHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHH
Q 010983 32 YTKVEESFNVQAMHDILYHRH---HLDIYDHLEF-PGVVPRTFIGALLVSVLASPIILVMSFLHLPKTHGLIAVRLALGC 107 (496)
Q Consensus 32 yt~~DEsFn~~e~h~~L~~g~---g~~~we~~~f-Pg~~~RSfi~pll~a~~~~P~~~l~~~lg~~~~~~~~~~Rl~lgl 107 (496)
+...|..||+-....++-+|. ....||. | ||.... -+|++.....-+..++....+ .....+.-.+=++
T Consensus 48 ~~e~Dpyy~~r~~~~~l~~g~~~~~~~~~~~--YP~G~~i~--~~pl~~~l~~~~~~~~~~~~~---~~~~~~~~~~Pai 120 (773)
T COG1287 48 FGEFDPYYHYRLIENLLKNGPPRDFFDPYDN--YPPGSPID--FPPLFLYLTAALGLILGSIFP---VSLETAALLFPAI 120 (773)
T ss_pred cCCCCcHHHHHHHHHHHHhCCCccCCChhhc--CCCCCCCC--CCchHHHHHHHHHHHHHccCc---hHHHHHHHHhhHH
Confidence 467899999988888885552 3344554 5 443233 466655555444343333333 2222222222233
Q ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHHHHhhhHHHHhcCCccch-----hHHHHHHHHHHH
Q 010983 108 ITLSTLRFFRAQVRYKFGSQVEAFFVILTAFQFHLLFYCTRPLPN-----ILALGIVNLAYG 164 (496)
Q Consensus 108 ~s~~~~~~~~~~i~~~~g~~~a~~~lll~~~s~~~~~~ssRtLpN-----sfa~~l~~~al~ 164 (496)
+.+++....|...++..|...|.+..++.+.... +.+||.++ ++++.+.++++.
T Consensus 121 lG~L~vI~vYl~~r~i~~~~~g~~aa~ll~~~p~---~~~rt~~G~~d~~~~~~~~~~~~l~ 179 (773)
T COG1287 121 LGVLTVIPVYLLGRRILGDKTGLLAALLLALAPG---YLSRTVAGFYDTDMFELLLPLFALF 179 (773)
T ss_pred HhhHHHHHHHHHHHHHhcchhhHHHHHHHHHhhH---HHHHhhcCccCCCchHHHHHHHHHH
Confidence 3444444555556677888888888887777666 34555554 455555544444
No 21
>COG4745 Predicted membrane-bound mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=84.48 E-value=6.5 Score=42.41 Aligned_cols=124 Identities=22% Similarity=0.321 Sum_probs=68.3
Q ss_pred HHHHHHhCCCCCCCCccccHHHHHHHhccCcccccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHH
Q 010983 23 ATFYVLAMPYTKVEESFNVQAMHDILYHRHHLDIYDHLEFPGVVPRTFIGALLVSVLASPIILVMSFLHLPKTHGLIAVR 102 (496)
Q Consensus 23 ~~~~~~~~pyt~~DEsFn~~e~h~~L~~g~g~~~we~~~fPg~~~RSfi~pll~a~~~~P~~~l~~~lg~~~~~~~~~~R 102 (496)
++..+-..|+++ ||+=.--=+.+++.+ -+|+|+ |- +=||++.-.-+. +.+++|.+....-+.|-
T Consensus 29 RL~~Lg~r~~h~-DEs~~~~w~Lk~l~~----Gaw~Yr--Pi-----~HGPfL~hvn~a----vF~~lGasDataRlvvA 92 (556)
T COG4745 29 RLYNLGLRPFHF-DESRHATWILKYLEQ----GAWSYR--PI-----YHGPFLYHVNYA----VFGLLGASDATARLVVA 92 (556)
T ss_pred HHHhcCCCcccc-chhhHHHHHHHHHhc----Ccceec--cc-----ccCchhhhhhhh----hhhhcccchhhhhhhHH
Confidence 344444456554 766422213334422 367777 52 336666655444 55678876654333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHhhhHHHHhcCCccch-hHHHHHHHHHHHHHhc
Q 010983 103 LALGCITLSTLRFFRAQVRYKFGSQVEAFFVILTAFQFHLLFYCTRPLPN-ILALGIVNLAYGFWLK 168 (496)
Q Consensus 103 l~lgl~s~~~~~~~~~~i~~~~g~~~a~~~lll~~~s~~~~~~ssRtLpN-sfa~~l~~~al~~~l~ 168 (496)
+ .|.+-.+.-+.+ +++.|.....+...+.+++..+.|| ||+.=| .+-..+++.+.+...|
T Consensus 93 v-~G~llpL~awL~----R~rL~d~evlal~~LLA~sPvlVYY-SRFmR~Dl~la~ftl~aVg~~vR 153 (556)
T COG4745 93 V-TGVLLPLTAWLY----RTRLGDKEVLALATLLAFSPVLVYY-SRFMRNDLLLAAFTLLAVGFAVR 153 (556)
T ss_pred H-hhhHHHHHHHHH----HHhccchHHHHHHHHHhcChhhhhH-HHHHhhhHHHHHHHHHHHHHHHH
Confidence 2 233333344443 3466766556666678888887776 677777 5556666677776654
No 22
>KOG2292 consensus Oligosaccharyltransferase, STT3 subunit [Posttranslational modification, protein turnover, chaperones]
Probab=77.44 E-value=1.3e+02 Score=33.66 Aligned_cols=24 Identities=17% Similarity=0.462 Sum_probs=21.4
Q ss_pred chhhhhhhhHHHHHHHHHHHHHhh
Q 010983 313 LRFIISSVPIFNLSAAVAASRIFM 336 (496)
Q Consensus 313 ~RFI~p~~Pll~l~aA~~~~~l~~ 336 (496)
-|-++-+-|..|+.+|++++.+..
T Consensus 407 VRLmLtLtP~vCils~ia~S~~~~ 430 (751)
T KOG2292|consen 407 VRLMLTLTPVVCILSGIAFSQLLD 430 (751)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHH
Confidence 588999999999999999998854
No 23
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane
Probab=76.46 E-value=79 Score=30.83 Aligned_cols=71 Identities=21% Similarity=0.194 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHHHhc
Q 010983 98 LIAVRLALGCITLSTLRFFRAQVRYKFG-SQVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGFWLK 168 (496)
Q Consensus 98 ~~~~Rl~lgl~s~~~~~~~~~~i~~~~g-~~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~~l~ 168 (496)
....|...+++.+++....+...++..+ +..|.+..++.+++......+...+.++..+..++++++.+.+
T Consensus 82 ~~~~R~~~~l~~~~~~~l~y~~~~~~~~s~~~al~aa~l~~~~~~~~~~sr~~~~D~~l~~f~~la~~~~~~ 153 (245)
T PF02366_consen 82 YWAARLPSALFGALTVPLVYLILRRLFGSRRAALLAALLLALDPSLIVQSRYALLDSILLFFILLAIYCLLR 153 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 4688999999999988888887777766 4567777778888887777777778888888888887776654
No 24
>PF14897 EpsG: EpsG family
Probab=76.37 E-value=88 Score=31.33 Aligned_cols=54 Identities=17% Similarity=0.375 Sum_probs=35.4
Q ss_pred HHHHhcCCccchhHHHHHHHHHHHHHhcCChhhhHHHhHhhhhhhhhhHHHHHHHH
Q 010983 141 HLLFYCTRPLPNILALGIVNLAYGFWLKGDFYAALNCLIFSAVVFRCDMVLLLCPL 196 (496)
Q Consensus 141 ~~~~~ssRtLpNsfa~~l~~~al~~~l~~~~~~~i~~l~~a~vv~Rp~~a~l~~pl 196 (496)
..+....-.+=+++|+.+..+|+.+..++|+.+.+.+..+|..+ = .++++.+|+
T Consensus 104 ~~~~~~~~~iRq~~A~~~~~~a~~~~~~~k~~~~~~~~lla~~f-H-~Saii~l~~ 157 (330)
T PF14897_consen 104 FFFFYSFNQIRQSLAISFFLLALSYLYKKKWIKFILLVLLAILF-H-YSAIIFLPL 157 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHH-H-HHHHHHHHH
Confidence 33444555666899999999998888888877776665554332 3 344555555
No 25
>COG4485 Predicted membrane protein [Function unknown]
Probab=66.29 E-value=2.5e+02 Score=32.40 Aligned_cols=128 Identities=8% Similarity=0.122 Sum_probs=58.7
Q ss_pred ccccHHHHHHH---hccCcccccccCCCCCCCchhhHHHHHHHH-HHHHHHHHHHhhCC-CchHHHHHHHHHHHHHH-HH
Q 010983 38 SFNVQAMHDIL---YHRHHLDIYDHLEFPGVVPRTFIGALLVSV-LASPIILVMSFLHL-PKTHGLIAVRLALGCIT-LS 111 (496)
Q Consensus 38 sFn~~e~h~~L---~~g~g~~~we~~~fPg~~~RSfi~pll~a~-~~~P~~~l~~~lg~-~~~~~~~~~Rl~lgl~s-~~ 111 (496)
.=|+-..|..+ +||.+--=|++. .|-+.-.+.+.--+.+ ...|..++..+.+. |..........-+..++ .+
T Consensus 45 fhQyviF~~~lrnilhgs~~ffYtft--sGLG~n~ya~l~YY~gSfL~pl~fff~~~~mpdaiyl~T~ikFgligl~a~~ 122 (858)
T COG4485 45 FHQYVIFQMLLRNILHGSSSFFYTFT--SGLGGNFYALLSYYLGSFLMPLVFFFDLTSMPDAIYLPTLIKFGLIGLSAFI 122 (858)
T ss_pred HHHHHHHHHHHHHHhccCCceeEEee--ccCCchHHHHHHHHHhhHHHHHHHHHHHhcCcceeehhHHHHHHHHHHHHHH
Confidence 33555555544 345554557766 6776666665543322 22233333444443 22222223333333332 33
Q ss_pred HHHHHHHHHHHHhCchHHHHHHH--HHHhhhHHHHhcCCccch-hHHHHHHHHHHHHHhcCChh
Q 010983 112 TLRFFRAQVRYKFGSQVEAFFVI--LTAFQFHLLFYCTRPLPN-ILALGIVNLAYGFWLKGDFY 172 (496)
Q Consensus 112 ~~~~~~~~i~~~~g~~~a~~~ll--l~~~s~~~~~~ssRtLpN-sfa~~l~~~al~~~l~~~~~ 172 (496)
+....+.........+.+..+.+ ...+|-..- |=-+ ..-+++..+++-...++|..
T Consensus 123 sf~~~~~~~~~ll~~~~st~~almsf~~Sqlei~-----~WlDvfilLPLiIlGl~rli~ErK~ 181 (858)
T COG4485 123 SFVVLFQKFSILLKLRISTFYALMSFGVSQLEIY-----TWLDVFILLPLIILGLERLITERKI 181 (858)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhheEEee-----hHHHHHHHHHHHHHHHHHHHhhccc
Confidence 44444444443333343333332 233332221 2234 34467888888888776643
No 26
>KOG3893 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=63.80 E-value=56 Score=34.02 Aligned_cols=135 Identities=13% Similarity=0.034 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHhCchHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHHHhcCChhhhHHHhHh
Q 010983 102 RLALGCITLSTLRFFRAQVR-YKFGSQVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGFWLKGDFYAALNCLIF 180 (496)
Q Consensus 102 Rl~lgl~s~~~~~~~~~~i~-~~~g~~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~~l~~~~~~~i~~l~~ 180 (496)
+.+-+.+-.+.-+..+|.+. |..+++.+.....+.+.++...-.|+|---+|+..+++++-++...+++...+...-++
T Consensus 99 K~Lf~~~Dll~a~L~~kLl~~~~i~~~~a~~~~~fWLlNPl~aiIStRGNaesi~~~lvi~~lyllqK~~v~~A~l~~Gl 178 (405)
T KOG3893|consen 99 KLLFAIFDLLIATLIYKLLHMRSISRKQALIYASFWLLNPLTAIISTRGNAESIVAFLVILTLYLLQKSEVFLAGLAHGL 178 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhhhhcCchheeeecCCchHHHHHHHHHHHHHHHHHhHHHHHHHHhhh
Confidence 33334444445555677766 66777777777777777888888899999999999999999987766665444444453
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhcccc-----HHHHHHH-----HHHHHHHHHHHHHhhhhhhcccc
Q 010983 181 SAVVFRCDMVLLLCPLGLVLLLTKSIS-----LWKALKC-----CIGMVLLSVGLTVLVDSIMWKKL 237 (496)
Q Consensus 181 a~vv~Rp~~a~l~~pl~l~~l~~~~~~-----~~~~l~~-----~i~~~l~~l~~~v~iDs~fyg~~ 237 (496)
++-+|---.+...|+.+...-+++.+ +..++.. .+.+++...+.+...=.+-||..
T Consensus 179 -aIh~KIYPliY~l~i~l~ls~~~~~s~~~~~l~sLL~~~k~l~~~~~tLtsf~~~~~~fY~iYG~e 244 (405)
T KOG3893|consen 179 -AIHLKIYPLIYSLAIYLSLSTRKTQSTPLDKLCSLLSINKQLCLILGTLTSFAACTWTFYYIYGWE 244 (405)
T ss_pred -eeeeEechHHhhhhhheEEecCCCCCcHHHHHHHHhccccchhhhHHHHHHHHHHHHHHHHHHhHH
Confidence 34456555666666666554433222 2223221 23445555555544445555543
No 27
>PLN02841 GPI mannosyltransferase
Probab=59.63 E-value=2.6e+02 Score=30.40 Aligned_cols=72 Identities=19% Similarity=0.152 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHHHhcCChhhhHHHhHhhhhhhhhhHHHHHHHHHHHH
Q 010983 128 VEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGFWLKGDFYAALNCLIFSAVVFRCDMVLLLCPLGLVL 200 (496)
Q Consensus 128 ~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~~l~~~~~~~i~~l~~a~vv~Rp~~a~l~~pl~l~~ 200 (496)
.+.+...+-+.++...--++|--++++...+++.+++...+|+...+.+++|++ +-++.-.+++..|+.++.
T Consensus 113 ~~~~~a~~wL~NPlti~istrGSse~i~~~lvl~~L~~l~~g~~~~Aa~~lgla-vhfkiYPiIy~~Pi~l~l 184 (440)
T PLN02841 113 VCTWSVMVWLFNPFTFTIGTRGNCEPIVCAVILWILICLMNGRLLQAAFWYGLV-VHFRIYPIIYALPIILVL 184 (440)
T ss_pred ccHHHHHHHHhCcHHHHHhcccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHhhhhHHHHHHHHHHHh
Confidence 344445566778888888999999999999999999999999987777777775 556888888888988776
No 28
>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells. A lipid-linked core-oligosaccharide is assembled at the membrane of the endoplasmic reticulum and transferred to selected asparagine residues of nascent polypeptide chains by the oligosaccharyl transferase (OTase) complex []. This family consists of the oligsacharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosccharyl transferase (OTase) complex of proteins and is required for its activity [].; GO: 0004576 oligosaccharyl transferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 3AAG_B 2ZAI_D 2ZAG_A 3RCE_A.
Probab=59.56 E-value=2.5e+02 Score=30.13 Aligned_cols=124 Identities=16% Similarity=0.195 Sum_probs=55.4
Q ss_pred CCCCCCccccHHHHHHHhcc-C-cccccccCC-CCCCCchhhHHHHHHHHHHHHHHHHHHhhCCCch----H-HHHHHHH
Q 010983 32 YTKVEESFNVQAMHDILYHR-H-HLDIYDHLE-FPGVVPRTFIGALLVSVLASPIILVMSFLHLPKT----H-GLIAVRL 103 (496)
Q Consensus 32 yt~~DEsFn~~e~h~~L~~g-~-g~~~we~~~-fPg~~~RSfi~pll~a~~~~P~~~l~~~lg~~~~----~-~~~~~Rl 103 (496)
+...|+.||+.....++-|| + +...+|+.. ||.-.+-. -+|++...... +...++.... . ..+.|=
T Consensus 29 ~~~~Dpyy~~r~~~~~~~~G~~~~~~~fd~~~~yP~G~~i~-~~pl~~~l~~~----~~~~~~~~~~~~l~~v~~~~pp- 102 (483)
T PF02516_consen 29 LNEFDPYYHYRLIEYIVNNGIFPFYNWFDPFTWYPWGRPID-WPPLFPYLTAA----FYAILGGFGPVSLYEVAFWLPP- 102 (483)
T ss_dssp HSS-GGGEETTEE--S-HHHHHHHHHHHHHHS---TTS----TT-HHHHHHHH----HHHS-SS-HH----HHHHHHHH-
T ss_pred eeCCCHHHHHHHHHHHHHcCCCcccCcCCccccCCCCCccC-cccHHHHHHHH----HHHHHHHhcchhHHHHHHHHHH-
Confidence 47899999996565555554 2 334455553 56321212 23433222111 2223332111 1 122332
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHhhhHHHHhcCCccc-----hhHHHHHHHHHHHHHh
Q 010983 104 ALGCITLSTLRFFRAQVRYKFGSQVEAFFVILTAFQFHLLFYCTRPLP-----NILALGIVNLAYGFWL 167 (496)
Q Consensus 104 ~lgl~s~~~~~~~~~~i~~~~g~~~a~~~lll~~~s~~~~~~ssRtLp-----Nsfa~~l~~~al~~~l 167 (496)
++|.++++..+++ .++..|+..|....++.+.++.. ..||.. +.+|..+.+++++.++
T Consensus 103 vl~~L~vi~~y~~---~~~~~~~~~Gl~aA~l~a~~p~~---l~RT~~G~~D~~~~~~~f~~l~~~~~~ 165 (483)
T PF02516_consen 103 VLGALTVIPVYLL---GRRLGGRKAGLLAAFLLAISPGY---LSRTMAGFYDHHMLELFFPLLIIYFFL 165 (483)
T ss_dssp HHGGGGHHHHHHH---HHHTT-HHHHHHHHHHHTTSHHH---HHTSSTT--SGGGGTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---HHHhCCCchHHHHHHHHHHhHHH---HHHhcCCCcccchHHHHHHHHHHHHHH
Confidence 2333333333333 34445667777888888887773 445543 3666666666665554
No 29
>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria. The function is not known.
Probab=58.33 E-value=1.7e+02 Score=27.77 Aligned_cols=29 Identities=14% Similarity=0.012 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Q 010983 98 LIAVRLALGCITLSTLRFFRAQVRYKFGS 126 (496)
Q Consensus 98 ~~~~Rl~lgl~s~~~~~~~~~~i~~~~g~ 126 (496)
-+.+-++-+++++++...++..+.+..++
T Consensus 40 a~~vNl~Sal~sA~tv~~l~~~~~~l~~~ 68 (178)
T PF11028_consen 40 AWRVNLLSALSSALTVLFLFWSITRLLRK 68 (178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44556677888888888888777665444
No 30
>TIGR03459 crt_membr carotene biosynthesis associated membrane protein. This model represents a family of hydrophobic and presumed membrane proteins. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).
Probab=58.19 E-value=2.9e+02 Score=30.38 Aligned_cols=108 Identities=13% Similarity=0.077 Sum_probs=64.6
Q ss_pred hhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHhhhHHHHh-cCCccchhHHHHHHHHHHHHHh
Q 010983 89 FLHLPKTHGLIAVRLALGCITLSTLRFFRAQVRYKFGSQVEAFFVILTAFQFHLLFY-CTRPLPNILALGIVNLAYGFWL 167 (496)
Q Consensus 89 ~lg~~~~~~~~~~Rl~lgl~s~~~~~~~~~~i~~~~g~~~a~~~lll~~~s~~~~~~-ssRtLpNsfa~~l~~~al~~~l 167 (496)
..|-+.....+.-|++...--+...+...|..+ +.|.+- ...+.+...++-...- .---.-+.+-+.+...+++..+
T Consensus 157 l~g~~i~~~v~~~Rl~~l~g~~l~~w~~~rLar-~~g~~~-~~AlWL~~~NPLviihlvgg~HnealM~gl~l~gl~~~~ 234 (470)
T TIGR03459 157 VTGDNVTAGTLAFKLLSLPGLAVMVWAVPKLAT-HLGGNP-TVALWLGVLNPLVVIHLIGGMHNEMLMVGLVSAGILLAL 234 (470)
T ss_pred HhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCH-HHHHHHHHcCchhhhhhhcchhHHHHHHHHHHHHHHHHH
Confidence 345455555678899877777777787777654 445332 2223344455444333 3334445777888888998888
Q ss_pred cCChhhhHHHhHhhhhhhhhhHHHHHHHHHHHH
Q 010983 168 KGDFYAALNCLIFSAVVFRCDMVLLLCPLGLVL 200 (496)
Q Consensus 168 ~~~~~~~i~~l~~a~vv~Rp~~a~l~~pl~l~~ 200 (496)
++++..+..++++++-+ -++.++.+ |+..+.
T Consensus 235 r~~~~~g~vli~~a~~V-K~~a~l~L-pf~~~~ 265 (470)
T TIGR03459 235 KRRPVAGIALIAVAVAL-KATAGIAL-PFVVWI 265 (470)
T ss_pred hcccHHHHHHHHHHHHH-hHHHHHHH-HHHHHH
Confidence 88876566666665433 66665544 444433
No 31
>COG3463 Predicted membrane protein [Function unknown]
Probab=53.98 E-value=3.2e+02 Score=29.68 Aligned_cols=74 Identities=12% Similarity=-0.023 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHhhhHHH-HhcCCccchhHHHHHHHHHHHHHhcCChhhhHHH
Q 010983 104 ALGCITLSTLRFFRAQVRYKFG-SQVEAFFVILTAFQFHLL-FYCTRPLPNILALGIVNLAYGFWLKGDFYAALNC 177 (496)
Q Consensus 104 ~lgl~s~~~~~~~~~~i~~~~g-~~~a~~~lll~~~s~~~~-~~ssRtLpNsfa~~l~~~al~~~l~~~~~~~i~~ 177 (496)
.|+++-+++-+-.+...++..+ .+.|....++-+++.-.. --.--+.|-+++-+++.+|.+++.+++++.....
T Consensus 93 ~Q~i~ials~~p~y~lA~eil~~E~~al~isilYll~p~i~gi~~FDFH~m~~avp~~~~a~~f~~r~k~~l~li~ 168 (458)
T COG3463 93 IQAIAIALSSLPIYLLAKEILNGEKEALAISILYLLNPYIEGINLFDFHPMAFAVPLFLLAYYFLKRKKWKLFLIF 168 (458)
T ss_pred HHHHHHHHhHHHHHHHHHHHhcccHHHHHHHHHHHhchhccCchhhhcchHHHHHHHHHHHHHHHHhcchhHHHHH
Confidence 4455555555555655556554 344443333333222110 0012346777888899999999999998865443
No 32
>KOG2647 consensus Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase [General function prediction only]
Probab=52.63 E-value=2.1e+02 Score=30.98 Aligned_cols=77 Identities=14% Similarity=0.152 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHhCc-hHHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHHHhcCChhhhHHHhHhhhhhhhhh
Q 010983 110 LSTLRFFRAQVRYKFGS-QVEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGFWLKGDFYAALNCLIFSAVVFRCD 188 (496)
Q Consensus 110 ~~~~~~~~~~i~~~~g~-~~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~~l~~~~~~~i~~l~~a~vv~Rp~ 188 (496)
.++-..+++..+..++. +.+....++-+++.-..|++ .-.++|+-+.++..|++...+|+.-.+..+.++++.+ |+-
T Consensus 137 ~la~~~Lyql~~~~~~~~k~s~~a~liFcfnPAsIF~t-s~YSEsLfa~~s~~Gi~~~~~~~~~~~~~~~~l~~~~-rSn 214 (444)
T KOG2647|consen 137 MLAAVALYQLTRIILHDPKISFYAALLFCFNPASIFLT-AGYSESLFALFSFLGILFLEKGRQFTGTLLFSLATLV-RSN 214 (444)
T ss_pred HHHHHHHHHHHHHHhcChhHHhhhhheeEecchHhhhh-HHhhHHHHHHHHHHHHHHHhcCCccceehHHHHHHHH-Hhh
Confidence 34556666666666665 66677777777777666654 4578888888999999888887643333333443332 554
No 33
>PF05007 Mannosyl_trans: Mannosyltransferase (PIG-M); InterPro: IPR007704 PIG-M has a DXD motif. The DXD motif is found in many glycosyltransferases that utilise nucleotide sugars. It is thought that the motif is involved in the binding of a manganese ion that is required for association of the enzymes with nucleotide sugar substrates [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=44.69 E-value=1.4e+02 Score=30.05 Aligned_cols=56 Identities=29% Similarity=0.267 Sum_probs=46.8
Q ss_pred cCCccchhHHHHHHHHHHHHHhcCChhhhHHHhHhhhhhhhhhHHHHHHHHHHHHHH
Q 010983 146 CTRPLPNILALGIVNLAYGFWLKGDFYAALNCLIFSAVVFRCDMVLLLCPLGLVLLL 202 (496)
Q Consensus 146 ssRtLpNsfa~~l~~~al~~~l~~~~~~~i~~l~~a~vv~Rp~~a~l~~pl~l~~l~ 202 (496)
|||=-++++-..+++..++...++|...+..++|++ +=+|---++...|+.++..-
T Consensus 2 STRGnaEsl~~~lVl~~l~~l~~~~~~~Aa~~lGla-VHfKIYPiIY~~~~~l~l~~ 57 (259)
T PF05007_consen 2 STRGNAESLLCFLVLLTLYFLLKGRWFLAAILLGLA-VHFKIYPIIYALPILLYLSN 57 (259)
T ss_pred CCCcchHHHHHHHHHHHHHHHHcCChhHHHHHhhHH-HHhhhccHHHHHHHHHHHhc
Confidence 789999999999999999999999987777777864 66788888888898887643
No 34
>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI [].; GO: 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=37.48 E-value=5.2e+02 Score=27.34 Aligned_cols=74 Identities=19% Similarity=0.238 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhhhHHHHhcCCccchhHHHHHHHHHHHHHhcCChhhhHHHhHhhhhhhhhhHHHHHHHHHHHHHH
Q 010983 128 VEAFFVILTAFQFHLLFYCTRPLPNILALGIVNLAYGFWLKGDFYAALNCLIFSAVVFRCDMVLLLCPLGLVLLL 202 (496)
Q Consensus 128 ~a~~~lll~~~s~~~~~~ssRtLpNsfa~~l~~~al~~~l~~~~~~~i~~l~~a~vv~Rp~~a~l~~pl~l~~l~ 202 (496)
.+.....+-+.++.....+..--..+++..+++.+++...+|+.-.+..++++++- .++-.+.+..|+.+...-
T Consensus 122 ~~~lv~~~YLfNP~tIlscva~ST~~f~nl~i~~sl~~a~~g~~~~s~i~lAlaty-lSlYpi~Ll~Plll~l~~ 195 (382)
T PF06728_consen 122 SPWLVAAFYLFNPLTILSCVALSTTVFTNLFILLSLYFAVKGNVFLSAISLALATY-LSLYPILLLPPLLLLLYS 195 (382)
T ss_pred chHHHHHHHHHCHHHHHHHHhcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHh
Confidence 34445556777888877777777889999999999998888887667777777665 578888888888765543
No 35
>PF11847 DUF3367: Domain of unknown function (DUF3367); InterPro: IPR021798 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is typically between 667 to 694 amino acids in length.
Probab=36.03 E-value=4.7e+02 Score=30.14 Aligned_cols=83 Identities=16% Similarity=0.097 Sum_probs=54.1
Q ss_pred HHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHH-HHHHHHhhhHHHHhcCCccchhHHHHHH
Q 010983 82 PIILVMSFLHLPKTHGLIAVRLALGCITLSTLRFFRAQVRYK-FGSQVEAF-FVILTAFQFHLLFYCTRPLPNILALGIV 159 (496)
Q Consensus 82 P~~~l~~~lg~~~~~~~~~~Rl~lgl~s~~~~~~~~~~i~~~-~g~~~a~~-~lll~~~s~~~~~~ssRtLpNsfa~~l~ 159 (496)
|+..+.+.+|++. .++=|+..+++-+.+.+.+.+..++. .|...++. ..+.-+.|..+.-...++.+++.-+.+.
T Consensus 60 ~Ff~l~~~lglP~---Wi~QRLWwallL~vaf~G~~rLa~~L~igs~~~r~~Aa~~YaLsPr~Lttlg~iSse~lP~al~ 136 (680)
T PF11847_consen 60 PFFALGDLLGLPD---WITQRLWWALLLTVAFWGALRLARALGIGSPASRVLAAVAYALSPRVLTTLGAISSETLPMALA 136 (680)
T ss_pred HHHHHhhhccCCH---HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHh
Confidence 5556778888754 45569999988888888888877655 46555544 3445666776666666666666655544
Q ss_pred HHHHHHHh
Q 010983 160 NLAYGFWL 167 (496)
Q Consensus 160 ~~al~~~l 167 (496)
=+.+--++
T Consensus 137 PWvLlPlv 144 (680)
T PF11847_consen 137 PWVLLPLV 144 (680)
T ss_pred hHHHHHHH
Confidence 44443333
No 36
>PF10190 Tmemb_170: Putative transmembrane protein 170; InterPro: IPR019334 This entry represents a group of putative transmembrane proteins conserved from nematodes to humans. The protein is only approximately 130 amino acids in length. The function is unknown.
Probab=27.01 E-value=3e+02 Score=23.95 Aligned_cols=23 Identities=26% Similarity=0.397 Sum_probs=16.1
Q ss_pred HHHHHhccCCcccchhhhhhhhHH
Q 010983 300 TFVLLYSKLPHKELRFIISSVPIF 323 (496)
Q Consensus 300 ~~v~v~SllpHKE~RFI~p~~Pll 323 (496)
..++...+..||=-|| +|+..++
T Consensus 27 ~liA~~~lRkhk~~~f-~pi~~l~ 49 (105)
T PF10190_consen 27 GLIAFFTLRKHKFGRF-IPIVILL 49 (105)
T ss_pred HHHHHHHHhhccchhh-hHHHHHH
Confidence 3567777889999998 5554433
No 37
>PF11529 AvrL567-A: Melampsora lini avirulence protein AvrL567-A; InterPro: IPR021608 AvrL567-A is a protein from the fungal pathogen flax which induces plant disease resistance in flax plants []. The protein has a novel fold []. ; PDB: 2QVT_A 2OPC_A.
Probab=24.36 E-value=59 Score=28.12 Aligned_cols=13 Identities=31% Similarity=0.470 Sum_probs=7.6
Q ss_pred CCCCC-ceeeecCe
Q 010983 464 LRFPP-FLLIKEPK 476 (496)
Q Consensus 464 ~~~~~-~~~~~~~~ 476 (496)
+++|| |+||.-||
T Consensus 113 pNfP~yIKIkLvpk 126 (127)
T PF11529_consen 113 PNFPDYIKIKLVPK 126 (127)
T ss_dssp TTS--EEEEEEEE-
T ss_pred CCCCcceEEEeccC
Confidence 45777 88888775
No 38
>PHA03164 hypothetical protein; Provisional
Probab=23.78 E-value=1.1e+02 Score=25.03 Aligned_cols=68 Identities=22% Similarity=0.201 Sum_probs=36.4
Q ss_pred HHHHhccCCcccc--hhhhhhhhHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 010983 301 FVLLYSKLPHKEL--RFIISSVPIFNLSAAVAASRIFMNRKKAFWKLLSIILIGFLLISLGCTAVTFMASYENYPS 374 (496)
Q Consensus 301 ~v~v~SllpHKE~--RFI~p~~Pll~l~aA~~~~~l~~~~~k~~~~~~~~~~~~~~~~~~~~s~~~~~~s~~NYpg 374 (496)
-+.-.+..||+|- .|+--+-|.= .......+|++|+|...-+ ++-++.++-..+-++.+++...||-|
T Consensus 18 dvm~gqVspH~~NdtsfveclpPpq---isrtawnlwnnrRktftFl---vLtgLaIamILfiifvlyvFnVnr~~ 87 (88)
T PHA03164 18 DVMDGQVSPHQENDTSFVECLPPPQ---ISRTAWNLWNNRRKTFTFL---VLTGLAIAMILFIIFVLYVFNVNRGG 87 (88)
T ss_pred HHHccccccccccCcccceecCCcc---cCchhHHHHHhhhheeehH---HHHHHHHHHHHHHHHHHHheeeccCC
Confidence 4456788899987 5553333321 2345567888887762211 11122222223344456777778765
No 39
>PHA02980 hypothetical protein; Provisional
Probab=20.33 E-value=7.2e+02 Score=23.29 Aligned_cols=15 Identities=27% Similarity=0.521 Sum_probs=11.6
Q ss_pred CCCCccccHHHHHHH
Q 010983 34 KVEESFNVQAMHDIL 48 (496)
Q Consensus 34 ~~DEsFn~~e~h~~L 48 (496)
-||.|++.-.+...|
T Consensus 5 ~~~~~~~~~~~~~~~ 19 (160)
T PHA02980 5 RCDISYNVICILSML 19 (160)
T ss_pred hhhhhhhHHHHHHHH
Confidence 489999988776666
No 40
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=20.06 E-value=1.4e+03 Score=26.53 Aligned_cols=70 Identities=16% Similarity=0.073 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCch-HHHHHHHHHHhhhHHHHhcCCc-cchhHHHHHHHHHHHHHhc
Q 010983 98 LIAVRLALGCITLSTLRFFRAQVRYKFGSQ-VEAFFVILTAFQFHLLFYCTRP-LPNILALGIVNLAYGFWLK 168 (496)
Q Consensus 98 ~~~~Rl~lgl~s~~~~~~~~~~i~~~~g~~-~a~~~lll~~~s~~~~~~ssRt-LpNsfa~~l~~~al~~~l~ 168 (496)
....|.+.|++++++.-.++..++ +.|.+ ...+.+.+....-..+...+|+ |-+++.+.++..+.+++.+
T Consensus 109 y~~mR~f~A~lgsl~vpl~y~t~r-~~~~s~l~~~l~~llv~~dn~~~t~sR~ILLDs~LlfF~~~~~y~~~r 180 (699)
T COG1928 109 YVGMRFFNALLGSLTVPLVYLIAR-RIGYSRLVAALAGLLVAFDNSFVTESRFILLDSFLLFFIVAAAYCFLR 180 (699)
T ss_pred hHHHHHHHHHHHhHHHHHHHHHHH-HhcchHHHHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999888886554 44433 2222222333333445556776 5568888888888887764
Done!