Query 010988
Match_columns 496
No_of_seqs 120 out of 1234
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 18:28:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010988.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010988hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.4E-64 4.8E-69 512.3 38.7 431 8-484 12-454 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.5E-60 5.2E-65 492.2 38.1 453 1-485 1-480 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 2.4E-59 8.3E-64 481.7 38.1 441 7-484 4-469 (480)
4 2acv_A Triterpene UDP-glucosyl 100.0 6.5E-59 2.2E-63 476.7 38.7 438 7-484 7-463 (463)
5 2c1x_A UDP-glucose flavonoid 3 100.0 1E-58 3.5E-63 474.0 37.2 437 1-484 1-452 (456)
6 2iya_A OLEI, oleandomycin glyc 100.0 6E-44 2.1E-48 363.5 36.6 400 7-483 10-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 7.5E-43 2.6E-47 352.5 27.2 368 8-482 21-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 6.8E-41 2.3E-45 339.9 25.5 381 10-487 1-403 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 6.1E-40 2.1E-44 332.9 30.6 380 7-483 18-412 (415)
10 3ia7_A CALG4; glycosysltransfe 100.0 3.7E-39 1.3E-43 325.5 33.8 391 7-483 2-397 (402)
11 1rrv_A Glycosyltransferase GTF 100.0 9.7E-40 3.3E-44 331.6 26.1 383 10-486 1-403 (416)
12 2iyf_A OLED, oleandomycin glyc 100.0 2.7E-38 9.2E-43 322.4 32.4 396 1-491 1-406 (430)
13 3h4t_A Glycosyltransferase GTF 100.0 4.2E-39 1.4E-43 325.4 25.1 368 10-484 1-382 (404)
14 2p6p_A Glycosyl transferase; X 100.0 2.5E-37 8.4E-42 310.5 28.8 363 10-487 1-382 (384)
15 2yjn_A ERYCIII, glycosyltransf 100.0 1.8E-37 6.1E-42 317.2 27.1 382 7-484 18-435 (441)
16 4fzr_A SSFS6; structural genom 100.0 3.2E-35 1.1E-39 296.5 24.5 350 7-462 13-383 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 4.9E-34 1.7E-38 287.9 27.2 364 7-483 18-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.8E-33 6.2E-38 283.0 28.8 365 9-485 1-389 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 5.1E-31 1.8E-35 266.9 30.5 367 7-484 18-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 7.6E-30 2.6E-34 253.6 28.3 350 10-491 3-364 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 9.4E-27 3.2E-31 205.7 13.8 162 267-462 7-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 5.3E-21 1.8E-25 189.8 22.2 350 10-492 7-364 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 4.5E-14 1.5E-18 133.3 19.4 118 280-413 156-275 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 5.8E-15 2E-19 133.8 9.2 127 279-410 26-184 (224)
25 3okp_A GDP-mannose-dependent a 99.5 3.9E-11 1.3E-15 119.6 28.1 332 7-459 2-360 (394)
26 1v4v_A UDP-N-acetylglucosamine 99.4 8.1E-12 2.8E-16 124.1 22.4 348 7-484 3-366 (376)
27 3c48_A Predicted glycosyltrans 99.4 2.5E-10 8.6E-15 115.6 32.9 380 7-489 18-432 (438)
28 1vgv_A UDP-N-acetylglucosamine 99.4 1.4E-11 5E-16 122.5 20.2 364 10-491 1-381 (384)
29 2gek_A Phosphatidylinositol ma 99.4 8.4E-11 2.9E-15 117.7 22.6 347 7-486 18-387 (406)
30 3dzc_A UDP-N-acetylglucosamine 99.3 5.9E-10 2E-14 111.4 23.7 330 7-445 23-369 (396)
31 3ot5_A UDP-N-acetylglucosamine 99.3 5.6E-10 1.9E-14 111.7 23.2 351 7-484 25-393 (403)
32 3fro_A GLGA glycogen synthase; 99.3 5.1E-09 1.7E-13 105.7 30.1 147 283-459 252-412 (439)
33 2iw1_A Lipopolysaccharide core 99.2 1.5E-09 5.1E-14 107.2 24.6 165 282-481 196-370 (374)
34 2jjm_A Glycosyl transferase, g 99.2 1.7E-08 5.7E-13 100.6 28.1 333 9-458 15-365 (394)
35 2r60_A Glycosyl transferase, g 99.1 2E-08 6.8E-13 103.5 28.1 151 283-460 263-441 (499)
36 2iuy_A Avigt4, glycosyltransfe 99.1 5.1E-09 1.7E-13 102.3 21.9 125 284-442 164-307 (342)
37 4hwg_A UDP-N-acetylglucosamine 99.1 3.9E-09 1.4E-13 104.7 21.0 322 7-447 7-346 (385)
38 2x6q_A Trehalose-synthase TRET 99.1 3.7E-08 1.3E-12 98.9 27.0 93 342-458 292-394 (416)
39 3beo_A UDP-N-acetylglucosamine 99.1 1.3E-08 4.3E-13 100.7 22.1 324 8-448 7-347 (375)
40 1rzu_A Glycogen synthase 1; gl 98.8 1.7E-07 5.9E-12 96.0 20.1 169 283-492 292-485 (485)
41 2qzs_A Glycogen synthase; glyc 98.8 9.3E-07 3.2E-11 90.5 22.6 141 283-454 293-455 (485)
42 3oy2_A Glycosyltransferase B73 98.7 4.1E-06 1.4E-10 83.7 24.7 148 282-457 184-369 (413)
43 3s28_A Sucrose synthase 1; gly 98.6 6E-06 2.1E-10 88.9 25.3 150 282-458 572-749 (816)
44 2vsy_A XCC0866; transferase, g 98.6 4.7E-05 1.6E-09 79.4 29.6 97 343-458 434-537 (568)
45 2f9f_A First mannosyl transfer 98.5 2.3E-06 7.8E-11 74.9 13.3 142 283-454 24-174 (177)
46 2xci_A KDO-transferase, 3-deox 98.5 7.8E-05 2.7E-09 73.5 25.8 98 344-462 261-364 (374)
47 2hy7_A Glucuronosyltransferase 98.1 0.00028 9.6E-09 70.3 21.9 76 342-445 264-354 (406)
48 2x0d_A WSAF; GT4 family, trans 97.9 0.00011 3.8E-09 73.3 14.0 81 342-445 294-381 (413)
49 3qhp_A Type 1 capsular polysac 97.8 0.00017 5.7E-09 61.8 12.1 145 282-460 2-157 (166)
50 3vue_A GBSS-I, granule-bound s 97.6 0.032 1.1E-06 57.4 26.7 139 283-442 328-476 (536)
51 3q3e_A HMW1C-like glycosyltran 97.6 0.00068 2.3E-08 69.9 13.8 153 282-457 441-602 (631)
52 2bfw_A GLGA glycogen synthase; 97.5 0.0021 7.3E-08 56.6 14.8 93 344-459 96-197 (200)
53 4gyw_A UDP-N-acetylglucosamine 97.5 0.0017 5.8E-08 69.5 15.5 154 280-455 521-680 (723)
54 3tov_A Glycosyl transferase fa 97.5 0.0032 1.1E-07 61.1 16.2 107 6-146 5-115 (349)
55 1psw_A ADP-heptose LPS heptosy 97.0 0.018 6.2E-07 55.6 15.9 103 10-146 1-106 (348)
56 3rhz_A GTF3, nucleotide sugar 96.7 0.0069 2.4E-07 58.4 10.0 111 344-482 215-337 (339)
57 2gt1_A Lipopolysaccharide hept 95.4 0.2 6.9E-06 47.6 13.4 44 10-53 1-46 (326)
58 3auf_A Glycinamide ribonucleot 91.9 2.2 7.7E-05 38.1 12.4 108 7-148 20-130 (229)
59 2ywr_A Phosphoribosylglycinami 91.2 2.9 9.8E-05 37.0 12.3 108 9-150 1-111 (216)
60 3t5t_A Putative glycosyltransf 90.1 17 0.00058 36.5 24.2 109 344-484 353-472 (496)
61 3iqw_A Tail-anchored protein t 87.6 3.9 0.00013 38.9 11.0 42 8-49 14-56 (334)
62 3av3_A Phosphoribosylglycinami 87.2 7.6 0.00026 34.1 11.9 107 9-149 3-112 (212)
63 1uqt_A Alpha, alpha-trehalose- 86.0 4.2 0.00014 40.8 10.8 109 345-485 333-454 (482)
64 1ccw_A Protein (glutamate muta 84.9 2.2 7.7E-05 34.6 6.8 48 8-55 2-49 (137)
65 3fgn_A Dethiobiotin synthetase 84.2 17 0.00057 32.9 12.9 39 6-44 22-62 (251)
66 2wqk_A 5'-nucleotidase SURE; S 82.4 3.8 0.00013 37.1 7.8 39 9-50 1-40 (251)
67 3rfo_A Methionyl-tRNA formyltr 82.0 11 0.00036 35.5 11.0 37 6-47 1-37 (317)
68 3tqr_A Phosphoribosylglycinami 81.8 7.4 0.00025 34.3 9.2 112 5-150 1-114 (215)
69 3zqu_A Probable aromatic acid 81.1 2.3 7.7E-05 37.4 5.6 45 9-54 4-48 (209)
70 3q0i_A Methionyl-tRNA formyltr 81.0 21 0.0007 33.5 12.6 36 7-47 5-40 (318)
71 1jkx_A GART;, phosphoribosylgl 80.9 21 0.00073 31.2 12.0 106 10-149 1-109 (212)
72 3io3_A DEHA2D07832P; chaperone 80.3 6.5 0.00022 37.6 9.0 41 8-48 16-59 (348)
73 3lqk_A Dipicolinate synthase s 79.9 2.1 7.2E-05 37.4 5.0 45 5-50 3-48 (201)
74 2bw0_A 10-FTHFDH, 10-formyltet 79.9 14 0.00048 34.9 11.1 105 9-151 22-131 (329)
75 3igf_A ALL4481 protein; two-do 79.5 2.9 9.8E-05 40.5 6.3 37 9-45 1-38 (374)
76 3nb0_A Glycogen [starch] synth 78.7 3.6 0.00012 42.9 7.0 44 345-390 495-551 (725)
77 4dzz_A Plasmid partitioning pr 78.5 11 0.00037 32.3 9.4 40 10-49 1-42 (206)
78 1g5t_A COB(I)alamin adenosyltr 77.8 22 0.00074 30.7 10.7 39 8-46 27-65 (196)
79 3ug7_A Arsenical pump-driving 76.7 3.9 0.00013 39.1 6.3 47 8-55 24-71 (349)
80 4dim_A Phosphoribosylglycinami 76.1 6.7 0.00023 38.1 8.0 35 7-46 5-39 (403)
81 2yxb_A Coenzyme B12-dependent 76.1 5.1 0.00017 33.5 6.1 48 8-55 17-64 (161)
82 1mvl_A PPC decarboxylase athal 75.4 3.1 0.00011 36.5 4.7 45 7-53 17-61 (209)
83 4ds3_A Phosphoribosylglycinami 75.3 21 0.0007 31.2 10.0 108 7-148 5-115 (209)
84 1fmt_A Methionyl-tRNA FMet for 74.8 26 0.00087 32.8 11.2 41 109-151 72-113 (314)
85 3vot_A L-amino acid ligase, BL 74.5 3.3 0.00011 40.7 5.3 37 5-46 1-37 (425)
86 3mcu_A Dipicolinate synthase, 73.8 3.9 0.00013 35.8 4.9 43 6-49 2-45 (207)
87 1sbz_A Probable aromatic acid 73.3 4 0.00014 35.4 4.9 45 10-55 1-46 (197)
88 2ejb_A Probable aromatic acid 72.8 5.5 0.00019 34.3 5.6 44 10-54 2-45 (189)
89 1kjn_A MTH0777; hypotethical p 71.9 6.4 0.00022 32.0 5.3 46 8-53 5-52 (157)
90 1y80_A Predicted cobalamin bin 71.9 9.7 0.00033 33.2 7.2 50 8-57 87-136 (210)
91 3zq6_A Putative arsenical pump 71.8 3 0.0001 39.4 4.1 45 10-55 14-59 (324)
92 1pzg_A LDH, lactate dehydrogen 71.8 2.3 8E-05 40.4 3.3 41 1-46 1-42 (331)
93 1meo_A Phosophoribosylglycinam 71.4 49 0.0017 28.8 11.5 106 10-149 1-109 (209)
94 3qjg_A Epidermin biosynthesis 70.2 5.8 0.0002 33.7 5.1 45 10-55 6-50 (175)
95 2i2x_B MTAC, methyltransferase 69.0 11 0.00039 34.1 7.2 61 7-72 121-181 (258)
96 3kcq_A Phosphoribosylglycinami 67.4 32 0.0011 30.1 9.4 104 8-150 7-113 (215)
97 3da8_A Probable 5'-phosphoribo 66.2 30 0.001 30.3 9.0 107 7-148 10-118 (215)
98 2ixd_A LMBE-related protein; h 65.9 31 0.0011 30.8 9.3 36 9-44 3-38 (242)
99 3mc3_A DSRE/DSRF-like family p 65.6 12 0.00041 30.0 5.9 47 8-54 14-63 (134)
100 3dfz_A SIRC, precorrin-2 dehyd 65.2 7.2 0.00025 34.6 4.8 157 272-464 24-186 (223)
101 1id1_A Putative potassium chan 64.8 5.7 0.0002 32.5 4.0 34 8-46 2-35 (153)
102 3ezx_A MMCP 1, monomethylamine 64.7 14 0.00046 32.5 6.6 49 7-55 90-138 (215)
103 1qzu_A Hypothetical protein MD 64.5 6.1 0.00021 34.6 4.2 48 5-53 15-63 (206)
104 2a5l_A Trp repressor binding p 64.4 8.7 0.0003 32.9 5.3 41 6-46 2-43 (200)
105 1f0y_A HCDH, L-3-hydroxyacyl-C 63.5 4.9 0.00017 37.4 3.6 38 4-46 10-47 (302)
106 3zzm_A Bifunctional purine bio 63.2 16 0.00055 36.3 7.2 119 1-138 1-119 (523)
107 2bln_A Protein YFBG; transfera 62.4 53 0.0018 30.4 10.5 40 109-150 66-106 (305)
108 2iz6_A Molybdenum cofactor car 62.0 45 0.0015 28.1 9.0 101 269-390 35-140 (176)
109 2hy5_B Intracellular sulfur ox 61.5 11 0.00037 30.5 4.9 43 7-49 3-48 (136)
110 4b4o_A Epimerase family protei 61.4 7.3 0.00025 35.9 4.4 33 10-46 1-33 (298)
111 1uan_A Hypothetical protein TT 60.9 40 0.0014 29.7 9.0 36 9-44 1-36 (227)
112 3tqq_A Methionyl-tRNA formyltr 60.6 70 0.0024 29.8 11.0 34 9-47 2-35 (314)
113 4gi5_A Quinone reductase; prot 60.6 13 0.00045 34.2 5.9 42 4-45 17-61 (280)
114 3p9x_A Phosphoribosylglycinami 60.4 85 0.0029 27.3 12.7 106 9-148 2-110 (211)
115 3k96_A Glycerol-3-phosphate de 59.9 5.9 0.0002 38.0 3.5 37 5-46 25-61 (356)
116 1p3y_1 MRSD protein; flavoprot 59.4 5.9 0.0002 34.3 3.1 47 8-55 7-53 (194)
117 3eag_A UDP-N-acetylmuramate:L- 59.3 9.1 0.00031 36.1 4.8 35 7-45 2-36 (326)
118 3l7i_A Teichoic acid biosynthe 59.2 2.7 9.3E-05 44.7 1.1 116 347-482 603-718 (729)
119 2xj4_A MIPZ; replication, cell 58.9 11 0.00036 34.8 5.0 41 7-47 1-43 (286)
120 3ih5_A Electron transfer flavo 58.9 16 0.00055 32.1 6.0 109 9-146 3-120 (217)
121 3ghy_A Ketopantoate reductase 58.8 5.7 0.00019 37.6 3.2 34 8-46 2-35 (335)
122 3llv_A Exopolyphosphatase-rela 58.2 6.4 0.00022 31.6 3.0 34 8-46 5-38 (141)
123 2ae2_A Protein (tropinone redu 57.9 32 0.0011 30.7 8.1 42 1-46 1-42 (260)
124 2r8r_A Sensor protein; KDPD, P 57.5 14 0.00049 32.7 5.3 40 8-47 5-44 (228)
125 1e2b_A Enzyme IIB-cellobiose; 57.4 18 0.00062 27.6 5.3 40 7-46 1-40 (106)
126 2vo1_A CTP synthase 1; pyrimid 57.2 9.5 0.00033 34.5 4.1 44 7-50 20-66 (295)
127 2fb6_A Conserved hypothetical 55.5 16 0.00054 28.6 4.8 45 5-50 4-52 (117)
128 1g63_A Epidermin modifying enz 55.3 8.6 0.0003 32.8 3.4 43 10-53 3-45 (181)
129 2ew2_A 2-dehydropantoate 2-red 55.2 8 0.00027 35.9 3.6 34 8-46 2-35 (316)
130 3r6d_A NAD-dependent epimerase 54.5 14 0.00049 32.1 5.0 37 7-46 2-39 (221)
131 4dll_A 2-hydroxy-3-oxopropiona 54.2 14 0.00047 34.7 5.0 35 7-46 29-63 (320)
132 1jx7_A Hypothetical protein YC 53.7 20 0.0007 27.4 5.3 41 10-50 2-47 (117)
133 3gpi_A NAD-dependent epimerase 53.6 7.3 0.00025 35.6 3.0 35 7-46 1-35 (286)
134 3dfu_A Uncharacterized protein 52.7 9.9 0.00034 33.9 3.5 35 7-46 4-38 (232)
135 3kkl_A Probable chaperone prot 52.0 22 0.00074 31.9 5.7 39 8-46 2-51 (244)
136 3n7t_A Macrophage binding prot 51.8 29 0.00099 31.1 6.6 38 9-46 9-57 (247)
137 2qyt_A 2-dehydropantoate 2-red 51.7 5.1 0.00018 37.4 1.6 36 5-45 4-45 (317)
138 2dwc_A PH0318, 433AA long hypo 51.6 1E+02 0.0034 29.9 11.2 36 8-48 18-53 (433)
139 4huj_A Uncharacterized protein 51.6 7.7 0.00026 34.1 2.7 35 7-46 21-55 (220)
140 3ty2_A 5'-nucleotidase SURE; s 51.3 16 0.00054 33.1 4.6 42 7-50 9-50 (261)
141 1evy_A Glycerol-3-phosphate de 51.1 6.8 0.00023 37.5 2.4 35 7-46 13-47 (366)
142 1wcv_1 SOJ, segregation protei 51.1 13 0.00045 33.4 4.2 41 7-47 3-45 (257)
143 1bg6_A N-(1-D-carboxylethyl)-L 50.7 11 0.00037 35.9 3.7 35 7-46 2-36 (359)
144 3ksu_A 3-oxoacyl-acyl carrier 50.7 35 0.0012 30.7 7.0 32 11-45 12-43 (262)
145 2qs7_A Uncharacterized protein 49.7 21 0.00072 29.0 4.8 44 11-54 9-53 (144)
146 1lss_A TRK system potassium up 49.6 11 0.00037 29.9 3.1 33 9-46 4-36 (140)
147 2g1u_A Hypothetical protein TM 49.0 20 0.00068 29.2 4.7 35 7-46 17-51 (155)
148 2zki_A 199AA long hypothetical 48.9 18 0.00061 30.9 4.6 38 8-46 3-41 (199)
149 3dm5_A SRP54, signal recogniti 48.5 67 0.0023 31.6 9.0 42 11-52 102-143 (443)
150 2hy5_A Putative sulfurtransfer 48.5 26 0.00088 27.8 5.1 40 10-49 1-44 (130)
151 4eg0_A D-alanine--D-alanine li 48.3 21 0.00072 33.2 5.3 38 9-46 13-54 (317)
152 3c24_A Putative oxidoreductase 48.3 15 0.0005 33.7 4.1 32 9-45 11-43 (286)
153 3l49_A ABC sugar (ribose) tran 47.7 1.3E+02 0.0043 26.8 10.6 42 5-46 1-44 (291)
154 2xw6_A MGS, methylglyoxal synt 47.5 64 0.0022 25.8 7.2 97 8-146 2-110 (134)
155 2vrn_A Protease I, DR1199; cys 46.5 41 0.0014 28.4 6.5 45 1-46 1-45 (190)
156 2lpm_A Two-component response 46.3 17 0.00059 28.6 3.7 35 112-148 47-86 (123)
157 2q6t_A DNAB replication FORK h 45.7 1.8E+02 0.006 28.4 11.9 42 12-53 203-245 (444)
158 3hn2_A 2-dehydropantoate 2-red 45.5 29 0.001 32.2 5.8 33 10-47 3-35 (312)
159 3doj_A AT3G25530, dehydrogenas 45.3 18 0.0006 33.7 4.2 35 7-46 19-53 (310)
160 3qsg_A NAD-binding phosphogluc 45.3 11 0.00039 35.1 2.9 36 6-46 21-57 (312)
161 3i83_A 2-dehydropantoate 2-red 45.2 30 0.001 32.3 5.8 33 10-47 3-35 (320)
162 3i4f_A 3-oxoacyl-[acyl-carrier 45.0 38 0.0013 30.3 6.3 35 9-46 6-40 (264)
163 3bgw_A DNAB-like replicative h 44.9 59 0.002 32.0 8.2 43 11-53 199-241 (444)
164 3icc_A Putative 3-oxoacyl-(acy 44.2 1.6E+02 0.0055 25.6 11.7 35 9-46 6-40 (255)
165 3fwy_A Light-independent proto 44.0 25 0.00087 32.8 5.1 45 3-47 41-86 (314)
166 1qgu_B Protein (nitrogenase mo 43.9 1.6E+02 0.0056 29.5 11.3 34 109-147 425-465 (519)
167 3lk7_A UDP-N-acetylmuramoylala 43.9 26 0.00089 34.6 5.4 40 1-45 1-40 (451)
168 3bul_A Methionine synthase; tr 43.9 44 0.0015 34.1 7.1 50 8-57 97-146 (579)
169 3to5_A CHEY homolog; alpha(5)b 43.4 30 0.001 27.6 4.8 42 108-151 47-97 (134)
170 4e3z_A Putative oxidoreductase 43.1 58 0.002 29.2 7.4 37 7-46 23-59 (272)
171 2h78_A Hibadh, 3-hydroxyisobut 43.0 20 0.00068 33.1 4.2 34 8-46 2-35 (302)
172 3uf0_A Short-chain dehydrogena 42.9 67 0.0023 28.9 7.7 33 11-46 32-64 (273)
173 3kjh_A CO dehydrogenase/acetyl 42.9 18 0.00062 31.9 3.8 37 10-46 1-37 (254)
174 1rw7_A YDR533CP; alpha-beta sa 42.4 44 0.0015 29.7 6.2 38 9-46 3-51 (243)
175 3q9l_A Septum site-determining 42.3 27 0.00094 31.0 4.9 39 9-47 1-41 (260)
176 1xgk_A Nitrogen metabolite rep 41.9 22 0.00074 33.8 4.3 39 5-47 1-39 (352)
177 4e12_A Diketoreductase; oxidor 41.9 21 0.00072 32.7 4.1 35 7-46 2-36 (283)
178 2hq1_A Glucose/ribitol dehydro 41.7 69 0.0024 28.0 7.5 35 6-44 2-36 (247)
179 3f6r_A Flavodoxin; FMN binding 41.5 28 0.00097 27.9 4.5 39 9-47 1-40 (148)
180 1g3q_A MIND ATPase, cell divis 41.4 31 0.0011 30.2 5.1 38 10-47 2-41 (237)
181 3l6d_A Putative oxidoreductase 41.3 18 0.00061 33.6 3.5 34 7-45 7-40 (306)
182 2c5a_A GDP-mannose-3', 5'-epim 40.7 29 0.00099 33.1 5.1 38 5-46 25-62 (379)
183 2ca5_A MXIH; transport protein 40.7 70 0.0024 23.1 5.6 55 429-487 26-83 (85)
184 3lyl_A 3-oxoacyl-(acyl-carrier 40.4 77 0.0026 27.8 7.6 33 11-46 6-38 (247)
185 1z7e_A Protein aRNA; rossmann 40.2 74 0.0025 33.0 8.5 40 110-151 67-107 (660)
186 3hwr_A 2-dehydropantoate 2-red 40.1 18 0.00063 33.7 3.5 32 8-44 18-49 (318)
187 3ic5_A Putative saccharopine d 40.1 22 0.00075 26.9 3.4 34 8-46 4-38 (118)
188 1hdo_A Biliverdin IX beta redu 40.1 32 0.0011 29.0 4.9 33 10-46 4-36 (206)
189 3u7q_B Nitrogenase molybdenum- 39.8 3E+02 0.01 27.5 12.5 34 109-147 429-469 (523)
190 2lnd_A De novo designed protei 39.7 30 0.001 24.5 3.6 49 380-442 50-100 (112)
191 3k9g_A PF-32 protein; ssgcid, 39.7 29 0.00098 31.2 4.6 42 5-47 22-65 (267)
192 1gsa_A Glutathione synthetase; 39.4 27 0.00092 32.1 4.5 38 9-46 1-41 (316)
193 3pgx_A Carveol dehydrogenase; 39.1 91 0.0031 28.0 8.1 33 10-45 15-47 (280)
194 3g0o_A 3-hydroxyisobutyrate de 39.1 18 0.00062 33.5 3.2 35 7-46 5-39 (303)
195 3tov_A Glycosyl transferase fa 39.1 1.1E+02 0.0038 28.7 8.9 101 10-151 186-290 (349)
196 2r85_A PURP protein PF1517; AT 39.0 28 0.00095 32.4 4.6 33 9-47 2-34 (334)
197 1sby_A Alcohol dehydrogenase; 38.8 96 0.0033 27.3 8.1 39 5-47 1-40 (254)
198 2zts_A Putative uncharacterize 38.7 36 0.0012 29.9 5.1 44 12-55 33-77 (251)
199 2rdm_A Response regulator rece 38.4 58 0.002 24.8 5.8 36 5-44 1-36 (132)
200 3gl9_A Response regulator; bet 38.3 44 0.0015 25.4 5.0 39 112-152 40-87 (122)
201 3obb_A Probable 3-hydroxyisobu 38.1 27 0.00092 32.4 4.2 32 9-45 3-34 (300)
202 3rpe_A MDAB, modulator of drug 38.0 38 0.0013 29.7 4.9 39 7-45 23-68 (218)
203 2q62_A ARSH; alpha/beta, flavo 38.0 46 0.0016 29.8 5.6 42 5-46 30-74 (247)
204 3qxc_A Dethiobiotin synthetase 38.0 33 0.0011 30.6 4.6 38 7-44 18-57 (242)
205 3h2s_A Putative NADH-flavin re 37.9 31 0.0011 29.7 4.4 33 10-46 1-33 (224)
206 2vou_A 2,6-dihydroxypyridine h 37.8 26 0.00088 33.7 4.2 36 5-45 1-36 (397)
207 3of5_A Dethiobiotin synthetase 37.7 38 0.0013 29.8 5.0 35 10-44 4-40 (228)
208 3ew7_A LMO0794 protein; Q8Y8U8 37.6 32 0.0011 29.5 4.4 34 10-47 1-34 (221)
209 2yvq_A Carbamoyl-phosphate syn 37.3 1.4E+02 0.0047 23.9 8.0 100 8-146 23-130 (143)
210 3tjr_A Short chain dehydrogena 37.3 1.2E+02 0.0042 27.6 8.7 34 10-46 31-64 (301)
211 3slg_A PBGP3 protein; structur 37.2 25 0.00086 33.3 4.0 36 7-46 22-58 (372)
212 2d1p_A TUSD, hypothetical UPF0 37.0 52 0.0018 26.5 5.3 41 9-49 12-56 (140)
213 4em8_A Ribose 5-phosphate isom 37.0 58 0.002 26.5 5.4 40 5-46 3-42 (148)
214 3dhn_A NAD-dependent epimerase 36.9 27 0.00093 30.2 3.9 34 9-46 4-37 (227)
215 2l2q_A PTS system, cellobiose- 36.8 40 0.0014 25.7 4.3 38 9-46 4-41 (109)
216 3sz8_A 2-dehydro-3-deoxyphosph 36.8 2.5E+02 0.0084 25.6 11.0 20 302-321 126-145 (285)
217 4h3k_B RNA polymerase II subun 36.7 2E+02 0.007 24.7 9.7 40 5-47 21-60 (214)
218 3s2u_A UDP-N-acetylglucosamine 36.7 62 0.0021 30.7 6.7 38 282-321 4-41 (365)
219 4hb9_A Similarities with proba 36.6 23 0.00077 34.0 3.6 30 10-44 2-31 (412)
220 4da9_A Short-chain dehydrogena 36.4 1.5E+02 0.0051 26.7 9.0 34 9-45 28-61 (280)
221 3o1l_A Formyltetrahydrofolate 36.3 2.4E+02 0.0083 25.9 10.3 105 7-148 103-210 (302)
222 3gk3_A Acetoacetyl-COA reducta 36.2 82 0.0028 28.1 7.2 36 8-46 23-58 (269)
223 3fs2_A 2-dehydro-3-deoxyphosph 36.1 2E+02 0.007 26.3 9.6 20 302-321 147-166 (298)
224 2d1p_B TUSC, hypothetical UPF0 36.0 48 0.0016 25.7 4.8 39 11-49 3-44 (119)
225 2p90_A Hypothetical protein CG 35.7 2.1E+02 0.0071 26.6 9.9 153 281-460 102-268 (319)
226 2q5c_A NTRC family transcripti 35.5 1.5E+02 0.005 25.3 8.2 37 109-151 134-170 (196)
227 3ouz_A Biotin carboxylase; str 35.4 83 0.0028 30.7 7.6 34 8-46 5-38 (446)
228 3mjf_A Phosphoribosylamine--gl 35.4 32 0.0011 33.7 4.5 26 8-38 2-27 (431)
229 3d3j_A Enhancer of mRNA-decapp 35.0 36 0.0012 31.6 4.5 34 10-46 133-168 (306)
230 3sxp_A ADP-L-glycero-D-mannohe 34.9 40 0.0014 31.7 5.0 38 5-46 6-45 (362)
231 3osu_A 3-oxoacyl-[acyl-carrier 34.9 1.2E+02 0.0041 26.5 8.0 35 9-46 3-37 (246)
232 1tvm_A PTS system, galactitol- 34.8 67 0.0023 24.7 5.4 38 7-44 19-57 (113)
233 2i2c_A Probable inorganic poly 34.7 14 0.00048 33.8 1.6 29 361-389 35-69 (272)
234 1qkk_A DCTD, C4-dicarboxylate 34.7 71 0.0024 25.3 5.9 47 380-442 74-120 (155)
235 3fwz_A Inner membrane protein 34.6 22 0.00076 28.4 2.7 34 9-47 7-40 (140)
236 1ydh_A AT5G11950; structural g 34.6 35 0.0012 29.9 4.1 44 345-389 89-143 (216)
237 3op4_A 3-oxoacyl-[acyl-carrier 34.4 44 0.0015 29.6 4.9 42 1-46 1-42 (248)
238 1ehi_A LMDDL2, D-alanine:D-lac 34.4 32 0.0011 32.9 4.2 39 8-46 2-45 (377)
239 1gz6_A Estradiol 17 beta-dehyd 34.4 37 0.0013 31.6 4.5 40 1-44 1-40 (319)
240 3cky_A 2-hydroxymethyl glutara 34.3 40 0.0014 30.9 4.7 33 8-45 3-35 (301)
241 1yb4_A Tartronic semialdehyde 34.2 27 0.00093 31.9 3.6 32 8-44 2-33 (295)
242 3t6k_A Response regulator rece 34.0 68 0.0023 24.8 5.6 38 112-151 42-88 (136)
243 3oid_A Enoyl-[acyl-carrier-pro 34.0 1.2E+02 0.0041 26.9 7.9 34 10-46 4-37 (258)
244 4gbj_A 6-phosphogluconate dehy 34.0 33 0.0011 31.6 4.1 29 11-44 7-35 (297)
245 2an1_A Putative kinase; struct 34.0 37 0.0013 31.2 4.4 39 5-43 1-40 (292)
246 3bbn_B Ribosomal protein S2; s 33.9 1.6E+02 0.0056 25.9 8.3 30 119-148 156-187 (231)
247 3enk_A UDP-glucose 4-epimerase 33.9 40 0.0014 31.4 4.7 33 9-45 5-37 (341)
248 1mio_B Nitrogenase molybdenum 33.9 2.1E+02 0.0073 28.0 10.3 34 109-147 376-409 (458)
249 1hyq_A MIND, cell division inh 33.9 38 0.0013 30.2 4.4 38 10-47 2-41 (263)
250 2pju_A Propionate catabolism o 33.8 56 0.0019 28.8 5.3 29 362-391 64-92 (225)
251 2q5c_A NTRC family transcripti 33.8 41 0.0014 28.9 4.3 31 360-391 50-80 (196)
252 2ph1_A Nucleotide-binding prot 33.7 46 0.0016 29.8 5.0 42 8-49 16-59 (262)
253 1jzt_A Hypothetical 27.5 kDa p 33.6 35 0.0012 30.6 4.0 34 10-46 59-94 (246)
254 3awd_A GOX2181, putative polyo 33.6 1.3E+02 0.0043 26.4 8.0 33 11-46 14-46 (260)
255 3h7a_A Short chain dehydrogena 33.5 1.1E+02 0.0037 27.0 7.5 34 10-46 7-40 (252)
256 3l4b_C TRKA K+ channel protien 33.5 17 0.00057 31.7 1.8 32 10-46 1-32 (218)
257 3rg8_A Phosphoribosylaminoimid 33.3 2E+02 0.0069 23.6 9.5 137 283-465 4-150 (159)
258 2raf_A Putative dinucleotide-b 33.3 31 0.0011 29.8 3.6 34 8-46 18-51 (209)
259 1ks9_A KPA reductase;, 2-dehyd 33.3 32 0.0011 31.2 3.9 32 10-46 1-32 (291)
260 2hmt_A YUAA protein; RCK, KTN, 33.2 26 0.00089 27.6 2.9 34 8-46 5-38 (144)
261 2c5m_A CTP synthase; cytidine 33.1 25 0.00085 31.6 2.8 43 8-50 21-66 (294)
262 2vqe_B 30S ribosomal protein S 32.9 2.4E+02 0.008 25.3 9.3 32 118-149 156-189 (256)
263 1q57_A DNA primase/helicase; d 32.9 2.8E+02 0.0095 27.4 11.1 42 12-53 245-287 (503)
264 1sb8_A WBPP; epimerase, 4-epim 32.9 23 0.0008 33.3 2.9 36 7-46 25-60 (352)
265 3ruf_A WBGU; rossmann fold, UD 32.8 23 0.0008 33.2 2.9 36 7-46 23-58 (351)
266 3vps_A TUNA, NAD-dependent epi 32.7 30 0.001 31.8 3.6 35 8-46 6-40 (321)
267 3pdu_A 3-hydroxyisobutyrate de 32.6 29 0.00099 31.7 3.4 33 9-46 1-33 (287)
268 3d3k_A Enhancer of mRNA-decapp 32.6 41 0.0014 30.4 4.3 33 10-45 86-120 (259)
269 4gwg_A 6-phosphogluconate dehy 32.6 25 0.00085 35.1 3.1 35 7-46 2-36 (484)
270 3qha_A Putative oxidoreductase 32.6 26 0.00088 32.3 3.1 33 9-46 15-47 (296)
271 4dgk_A Phytoene dehydrogenase; 32.6 20 0.00068 35.7 2.5 32 9-45 1-32 (501)
272 1g8m_A Aicar transformylase-IM 32.3 77 0.0026 32.0 6.5 108 9-137 5-112 (593)
273 1p9o_A Phosphopantothenoylcyst 32.3 33 0.0011 32.0 3.7 38 10-47 37-89 (313)
274 3lrx_A Putative hydrogenase; a 32.3 32 0.0011 28.2 3.4 36 9-47 23-58 (158)
275 3e8x_A Putative NAD-dependent 32.2 38 0.0013 29.6 4.0 37 7-47 19-55 (236)
276 4f3r_A Phosphopantetheine aden 32.2 49 0.0017 27.4 4.5 37 6-46 1-41 (162)
277 1vdc_A NTR, NADPH dependent th 32.1 14 0.00049 34.3 1.2 34 7-45 6-39 (333)
278 3dqp_A Oxidoreductase YLBE; al 32.0 37 0.0013 29.2 3.9 34 10-47 1-34 (219)
279 3sju_A Keto reductase; short-c 31.9 1.3E+02 0.0043 27.1 7.7 35 9-46 23-57 (279)
280 1t2a_A GDP-mannose 4,6 dehydra 31.9 40 0.0014 31.9 4.5 38 6-46 20-57 (375)
281 2ark_A Flavodoxin; FMN, struct 31.9 50 0.0017 27.8 4.7 41 7-47 2-44 (188)
282 3l4e_A Uncharacterized peptida 31.8 72 0.0025 27.6 5.7 48 269-316 16-63 (206)
283 1pjq_A CYSG, siroheme synthase 31.8 1.7E+02 0.006 28.6 9.2 151 274-462 7-166 (457)
284 1u0t_A Inorganic polyphosphate 31.8 45 0.0015 30.9 4.6 38 9-46 4-42 (307)
285 2x4g_A Nucleoside-diphosphate- 31.8 45 0.0015 31.0 4.7 35 8-46 12-46 (342)
286 3m6m_D Sensory/regulatory prot 31.7 57 0.002 25.6 4.8 38 112-151 52-100 (143)
287 2c20_A UDP-glucose 4-epimerase 31.6 42 0.0014 31.0 4.4 34 9-46 1-34 (330)
288 2o8n_A APOA-I binding protein; 31.5 47 0.0016 30.1 4.5 34 10-46 80-115 (265)
289 3g79_A NDP-N-acetyl-D-galactos 31.4 47 0.0016 33.0 4.9 36 7-47 16-53 (478)
290 3ucx_A Short chain dehydrogena 31.2 1.8E+02 0.0062 25.7 8.7 34 10-46 11-44 (264)
291 1kjq_A GART 2, phosphoribosylg 31.1 43 0.0015 32.0 4.6 38 5-47 7-44 (391)
292 3edm_A Short chain dehydrogena 31.0 1.6E+02 0.0054 26.0 8.2 34 10-46 8-41 (259)
293 2a33_A Hypothetical protein; s 31.0 1.4E+02 0.0049 25.9 7.5 102 270-389 36-147 (215)
294 2o3j_A UDP-glucose 6-dehydroge 30.9 45 0.0015 33.2 4.7 40 1-45 1-42 (481)
295 3ea0_A ATPase, para family; al 30.8 41 0.0014 29.5 4.0 40 8-47 2-44 (245)
296 3i6i_A Putative leucoanthocyan 30.7 37 0.0013 31.8 3.9 37 7-47 8-44 (346)
297 2phj_A 5'-nucleotidase SURE; S 30.6 50 0.0017 29.6 4.5 40 9-50 1-40 (251)
298 4e21_A 6-phosphogluconate dehy 30.6 30 0.001 33.0 3.2 35 7-46 20-54 (358)
299 1xq1_A Putative tropinone redu 30.6 1.5E+02 0.005 26.2 7.9 33 11-46 15-47 (266)
300 1e4e_A Vancomycin/teicoplanin 30.5 28 0.00097 32.7 3.1 39 8-46 2-44 (343)
301 2an1_A Putative kinase; struct 30.5 23 0.00079 32.6 2.3 27 363-389 65-95 (292)
302 4h15_A Short chain alcohol deh 30.4 52 0.0018 29.6 4.7 33 11-46 12-44 (261)
303 3b6i_A Flavoprotein WRBA; flav 30.3 61 0.0021 27.3 5.0 38 9-46 1-40 (198)
304 3f6p_A Transcriptional regulat 30.3 73 0.0025 23.9 5.0 40 111-152 39-84 (120)
305 2vpq_A Acetyl-COA carboxylase; 30.3 1.7E+02 0.0059 28.4 8.9 32 10-46 2-33 (451)
306 3ak4_A NADH-dependent quinucli 30.1 55 0.0019 29.1 4.9 33 11-46 13-45 (263)
307 3mog_A Probable 3-hydroxybutyr 30.0 31 0.0011 34.5 3.3 37 5-46 1-37 (483)
308 2b69_A UDP-glucuronate decarbo 30.0 47 0.0016 30.9 4.6 36 7-46 25-60 (343)
309 3u9l_A 3-oxoacyl-[acyl-carrier 30.0 73 0.0025 29.6 5.8 32 11-45 6-37 (324)
310 3nrc_A Enoyl-[acyl-carrier-pro 30.0 1.1E+02 0.0037 27.5 6.9 41 10-52 26-67 (280)
311 1qyd_A Pinoresinol-lariciresin 30.0 43 0.0015 30.6 4.2 34 9-46 4-37 (313)
312 2wm1_A 2-amino-3-carboxymucona 29.9 40 0.0014 31.4 4.0 71 232-317 102-175 (336)
313 2c29_D Dihydroflavonol 4-reduc 29.9 37 0.0013 31.6 3.7 35 8-46 4-38 (337)
314 1qyc_A Phenylcoumaran benzylic 29.8 44 0.0015 30.5 4.2 34 9-46 4-37 (308)
315 2b4q_A Rhamnolipids biosynthes 29.8 68 0.0023 28.9 5.5 33 11-46 30-62 (276)
316 3qvo_A NMRA family protein; st 29.7 35 0.0012 29.9 3.4 34 10-46 23-57 (236)
317 2gk4_A Conserved hypothetical 29.7 38 0.0013 30.0 3.5 22 26-47 32-53 (232)
318 1z82_A Glycerol-3-phosphate de 29.6 37 0.0013 31.8 3.7 33 9-46 14-46 (335)
319 1ydg_A Trp repressor binding p 29.5 73 0.0025 27.2 5.4 39 8-46 5-44 (211)
320 1xjc_A MOBB protein homolog; s 29.4 94 0.0032 25.8 5.8 39 9-47 4-42 (169)
321 2dpo_A L-gulonate 3-dehydrogen 29.3 35 0.0012 31.9 3.4 35 7-46 4-38 (319)
322 3qiv_A Short-chain dehydrogena 29.3 1.5E+02 0.0052 25.9 7.7 33 11-46 10-42 (253)
323 2z1m_A GDP-D-mannose dehydrata 29.2 47 0.0016 30.8 4.4 34 9-46 3-36 (345)
324 2pzm_A Putative nucleotide sug 29.2 50 0.0017 30.6 4.6 36 7-46 18-53 (330)
325 3czc_A RMPB; alpha/beta sandwi 29.1 55 0.0019 25.0 4.0 39 8-46 17-57 (110)
326 1yb1_A 17-beta-hydroxysteroid 29.0 1.8E+02 0.0062 25.8 8.3 33 11-46 32-64 (272)
327 3tfo_A Putative 3-oxoacyl-(acy 29.0 1.1E+02 0.0036 27.4 6.6 34 10-46 4-37 (264)
328 4g65_A TRK system potassium up 28.9 16 0.00056 36.2 1.1 34 8-46 2-35 (461)
329 2i87_A D-alanine-D-alanine lig 28.9 26 0.00087 33.4 2.4 39 8-46 2-44 (364)
330 3ius_A Uncharacterized conserv 28.8 43 0.0015 30.1 4.0 34 9-47 5-38 (286)
331 2pn1_A Carbamoylphosphate synt 28.6 62 0.0021 29.9 5.1 34 7-46 2-37 (331)
332 1xrs_B D-lysine 5,6-aminomutas 28.5 59 0.002 29.4 4.6 49 8-56 119-176 (262)
333 2uyy_A N-PAC protein; long-cha 28.5 42 0.0014 31.1 3.8 35 7-46 28-62 (316)
334 3bfv_A CAPA1, CAPB2, membrane 28.5 69 0.0024 28.9 5.2 39 8-46 80-120 (271)
335 3lyu_A Putative hydrogenase; t 28.5 61 0.0021 26.0 4.3 36 9-47 18-53 (142)
336 3r1i_A Short-chain type dehydr 28.4 1.6E+02 0.0056 26.3 7.8 33 11-46 33-65 (276)
337 3euw_A MYO-inositol dehydrogen 28.4 2E+02 0.0069 26.6 8.8 111 282-413 6-124 (344)
338 1u0t_A Inorganic polyphosphate 28.4 21 0.0007 33.3 1.6 28 362-389 76-107 (307)
339 4e5s_A MCCFLIKE protein (BA_56 28.4 54 0.0018 30.8 4.5 73 294-389 62-136 (331)
340 3oh8_A Nucleoside-diphosphate 28.3 52 0.0018 33.0 4.7 34 9-46 147-180 (516)
341 1ydh_A AT5G11950; structural g 28.3 93 0.0032 27.1 5.7 40 7-46 7-50 (216)
342 3pid_A UDP-glucose 6-dehydroge 28.2 38 0.0013 33.2 3.5 34 7-46 34-67 (432)
343 3pxx_A Carveol dehydrogenase; 28.2 2.1E+02 0.0073 25.4 8.7 34 10-46 10-43 (287)
344 1cp2_A CP2, nitrogenase iron p 28.1 55 0.0019 29.2 4.5 35 11-45 3-37 (269)
345 1ja9_A 4HNR, 1,3,6,8-tetrahydr 28.1 1.5E+02 0.0052 26.1 7.6 32 11-45 22-53 (274)
346 2r6j_A Eugenol synthase 1; phe 28.1 50 0.0017 30.4 4.3 33 11-47 13-45 (318)
347 3h5i_A Response regulator/sens 28.1 86 0.003 24.2 5.3 37 5-45 1-37 (140)
348 1orr_A CDP-tyvelose-2-epimeras 28.0 52 0.0018 30.5 4.4 33 9-45 1-33 (347)
349 1yt5_A Inorganic polyphosphate 27.8 19 0.00063 32.6 1.1 28 362-389 42-72 (258)
350 4iiu_A 3-oxoacyl-[acyl-carrier 27.7 1.7E+02 0.0059 25.8 7.8 59 9-71 25-83 (267)
351 2a33_A Hypothetical protein; s 27.7 1E+02 0.0034 26.9 5.8 40 7-46 11-54 (215)
352 2q1w_A Putative nucleotide sug 27.7 55 0.0019 30.3 4.6 36 7-46 19-54 (333)
353 3f2v_A General stress protein 27.6 47 0.0016 28.4 3.7 36 9-44 1-37 (192)
354 3rkr_A Short chain oxidoreduct 27.6 1.5E+02 0.005 26.2 7.3 33 11-46 30-62 (262)
355 3pnx_A Putative sulfurtransfer 27.6 74 0.0025 26.3 4.7 44 11-54 6-50 (160)
356 3r3s_A Oxidoreductase; structu 27.5 1.2E+02 0.004 27.6 6.7 34 10-46 49-82 (294)
357 3s55_A Putative short-chain de 27.5 2.2E+02 0.0075 25.4 8.6 34 10-46 10-43 (281)
358 2wsb_A Galactitol dehydrogenas 27.5 85 0.0029 27.5 5.6 33 11-46 12-44 (254)
359 2iml_A Hypothetical protein; F 27.4 1.5E+02 0.005 25.5 6.8 43 447-492 157-199 (199)
360 2q3e_A UDP-glucose 6-dehydroge 27.2 49 0.0017 32.8 4.2 32 9-45 5-38 (467)
361 3sty_A Methylketone synthase 1 27.1 59 0.002 28.2 4.5 37 9-46 12-48 (267)
362 2wm8_A MDP-1, magnesium-depend 27.0 2.6E+02 0.0089 22.9 8.5 32 26-57 73-104 (187)
363 3k31_A Enoyl-(acyl-carrier-pro 26.9 88 0.003 28.5 5.7 35 10-46 30-65 (296)
364 3c3m_A Response regulator rece 26.8 1E+02 0.0035 23.7 5.4 37 112-150 41-86 (138)
365 2vns_A Metalloreductase steap3 26.7 41 0.0014 29.1 3.2 34 8-46 27-60 (215)
366 3p9y_A CG14216, LD40846P; phos 26.6 3E+02 0.01 23.4 10.6 41 4-47 3-44 (198)
367 4g6h_A Rotenone-insensitive NA 26.6 36 0.0012 34.1 3.1 36 8-48 41-76 (502)
368 1rkx_A CDP-glucose-4,6-dehydra 26.5 32 0.0011 32.3 2.6 36 7-46 7-42 (357)
369 2zbw_A Thioredoxin reductase; 26.2 37 0.0013 31.4 3.1 36 7-47 3-38 (335)
370 1vpd_A Tartronate semialdehyde 26.2 63 0.0021 29.4 4.6 32 10-46 6-37 (299)
371 3dtt_A NADP oxidoreductase; st 26.0 50 0.0017 29.3 3.7 35 7-46 17-51 (245)
372 1t1j_A Hypothetical protein; s 26.0 87 0.003 24.7 4.6 34 8-41 6-47 (125)
373 1rcu_A Conserved hypothetical 26.0 96 0.0033 26.5 5.3 38 7-44 21-65 (195)
374 3qvl_A Putative hydantoin race 25.9 3.2E+02 0.011 24.0 9.1 39 105-146 57-96 (245)
375 3sbx_A Putative uncharacterize 25.9 75 0.0025 27.1 4.5 39 8-46 12-53 (189)
376 2etv_A Iron(III) ABC transport 25.9 58 0.002 30.6 4.3 37 109-148 88-125 (346)
377 1pno_A NAD(P) transhydrogenase 25.9 69 0.0023 26.6 4.0 37 10-46 24-63 (180)
378 3nbm_A PTS system, lactose-spe 25.8 64 0.0022 24.6 3.7 38 7-44 4-41 (108)
379 2xvy_A Chelatase, putative; me 25.8 1.7E+02 0.006 26.1 7.5 40 280-319 9-50 (269)
380 3ego_A Probable 2-dehydropanto 25.8 42 0.0014 31.1 3.2 32 10-47 3-34 (307)
381 3s40_A Diacylglycerol kinase; 25.5 96 0.0033 28.5 5.7 28 363-390 65-98 (304)
382 1iow_A DD-ligase, DDLB, D-ALA\ 25.5 91 0.0031 28.3 5.6 38 9-46 2-43 (306)
383 1d4o_A NADP(H) transhydrogenas 25.4 70 0.0024 26.6 4.0 37 10-46 23-62 (184)
384 3tl4_X Glutaminyl-tRNA synthet 25.4 95 0.0033 26.4 5.1 72 392-484 100-179 (187)
385 4egb_A DTDP-glucose 4,6-dehydr 25.4 34 0.0012 32.0 2.5 34 6-43 21-54 (346)
386 1dbw_A Transcriptional regulat 25.4 1.1E+02 0.0038 22.9 5.4 39 112-152 41-86 (126)
387 4ezb_A Uncharacterized conserv 25.2 47 0.0016 30.9 3.5 33 9-46 24-57 (317)
388 1dhr_A Dihydropteridine reduct 25.2 71 0.0024 28.0 4.6 35 9-46 6-40 (241)
389 2q1s_A Putative nucleotide sug 25.1 51 0.0018 31.2 3.9 36 7-46 30-66 (377)
390 3end_A Light-independent proto 25.0 76 0.0026 29.1 4.9 38 9-46 40-78 (307)
391 1jay_A Coenzyme F420H2:NADP+ o 25.0 53 0.0018 28.1 3.6 33 10-46 1-33 (212)
392 1q1v_A DEK protein; winged-hel 25.0 1.1E+02 0.0038 21.2 4.5 56 427-485 11-68 (70)
393 1w6u_A 2,4-dienoyl-COA reducta 24.9 97 0.0033 28.1 5.6 20 27-46 40-59 (302)
394 1n7h_A GDP-D-mannose-4,6-dehyd 24.9 63 0.0022 30.6 4.5 36 8-46 26-61 (381)
395 3uve_A Carveol dehydrogenase ( 24.9 2.5E+02 0.0087 25.0 8.5 33 10-45 11-43 (286)
396 2bi7_A UDP-galactopyranose mut 24.7 50 0.0017 31.6 3.7 34 8-46 2-35 (384)
397 2z1n_A Dehydrogenase; reductas 24.7 87 0.003 27.8 5.1 33 11-46 8-40 (260)
398 1eiw_A Hypothetical protein MT 24.7 93 0.0032 23.9 4.5 65 357-442 36-109 (111)
399 3lou_A Formyltetrahydrofolate 24.7 4E+02 0.014 24.2 11.1 106 7-149 93-201 (292)
400 2aqj_A Tryptophan halogenase, 24.6 50 0.0017 33.2 3.8 36 5-45 1-39 (538)
401 3c1o_A Eugenol synthase; pheny 24.5 53 0.0018 30.2 3.8 35 9-47 4-38 (321)
402 2rcy_A Pyrroline carboxylate r 24.5 28 0.00096 31.1 1.7 34 7-45 2-39 (262)
403 1oc2_A DTDP-glucose 4,6-dehydr 24.5 57 0.002 30.3 4.0 34 9-46 4-39 (348)
404 1txg_A Glycerol-3-phosphate de 24.5 41 0.0014 31.3 3.0 31 10-45 1-31 (335)
405 2ehd_A Oxidoreductase, oxidore 24.5 65 0.0022 28.0 4.1 33 11-46 6-38 (234)
406 3m1a_A Putative dehydrogenase; 24.5 50 0.0017 29.8 3.5 34 10-46 5-38 (281)
407 3q2i_A Dehydrogenase; rossmann 24.5 1.9E+02 0.0065 26.9 7.8 128 282-444 15-151 (354)
408 3abi_A Putative uncharacterize 24.4 60 0.002 30.8 4.1 40 1-46 8-47 (365)
409 1y1p_A ARII, aldehyde reductas 24.4 80 0.0027 29.1 5.0 36 7-46 9-44 (342)
410 1ae1_A Tropinone reductase-I; 24.4 2.2E+02 0.0076 25.2 8.0 33 11-46 22-54 (273)
411 2vvp_A Ribose-5-phosphate isom 24.4 39 0.0013 28.0 2.4 34 8-45 2-37 (162)
412 1t5b_A Acyl carrier protein ph 24.4 78 0.0027 26.6 4.6 38 9-46 1-44 (201)
413 1t35_A Hypothetical protein YV 24.3 1.4E+02 0.0048 25.4 6.0 93 281-387 32-133 (191)
414 1qo0_D AMIR; binding protein, 24.3 2E+02 0.0068 23.7 7.2 48 380-443 78-125 (196)
415 3guy_A Short-chain dehydrogena 24.3 56 0.0019 28.4 3.7 34 10-46 1-34 (230)
416 2pk3_A GDP-6-deoxy-D-LYXO-4-he 24.3 68 0.0023 29.4 4.4 35 8-46 11-45 (321)
417 2ahr_A Putative pyrroline carb 24.3 46 0.0016 29.6 3.2 34 8-46 2-35 (259)
418 3oow_A Phosphoribosylaminoimid 24.2 3E+02 0.01 22.7 8.4 145 282-468 6-160 (166)
419 1fmc_A 7 alpha-hydroxysteroid 24.2 1.7E+02 0.006 25.3 7.1 36 7-46 9-44 (255)
420 3foj_A Uncharacterized protein 24.2 1.3E+02 0.0045 21.9 5.3 33 9-45 56-88 (100)
421 1ycd_A Hypothetical 27.3 kDa p 24.1 1E+02 0.0034 26.6 5.4 42 5-46 1-45 (243)
422 4f6c_A AUSA reductase domain p 24.1 67 0.0023 31.1 4.5 41 5-48 64-104 (427)
423 4eso_A Putative oxidoreductase 24.0 84 0.0029 27.8 4.9 34 10-46 8-41 (255)
424 1rpn_A GDP-mannose 4,6-dehydra 24.0 68 0.0023 29.5 4.4 35 8-46 13-47 (335)
425 2fwm_X 2,3-dihydro-2,3-dihydro 23.9 78 0.0027 27.9 4.6 33 11-46 8-40 (250)
426 2wm3_A NMRA-like family domain 23.9 59 0.002 29.5 3.9 34 10-47 6-40 (299)
427 2rh8_A Anthocyanidin reductase 23.9 72 0.0025 29.5 4.6 32 10-45 10-41 (338)
428 3g17_A Similar to 2-dehydropan 23.9 25 0.00084 32.4 1.2 32 10-46 3-34 (294)
429 2x3n_A Probable FAD-dependent 23.8 41 0.0014 32.2 2.9 35 7-46 4-38 (399)
430 3e18_A Oxidoreductase; dehydro 23.8 3.6E+02 0.012 25.1 9.6 110 282-413 7-124 (359)
431 3sc4_A Short chain dehydrogena 23.7 1.3E+02 0.0046 27.0 6.3 33 11-46 10-42 (285)
432 1xq6_A Unknown protein; struct 23.7 88 0.003 27.2 5.0 36 7-46 2-39 (253)
433 3nva_A CTP synthase; rossman f 23.6 71 0.0024 32.1 4.5 42 9-50 2-46 (535)
434 1yde_A Retinal dehydrogenase/r 23.6 96 0.0033 27.7 5.2 33 11-46 10-42 (270)
435 2afh_E Nitrogenase iron protei 23.6 82 0.0028 28.5 4.8 36 11-46 4-39 (289)
436 3trh_A Phosphoribosylaminoimid 23.5 3.2E+02 0.011 22.7 10.6 141 281-467 6-160 (169)
437 4iin_A 3-ketoacyl-acyl carrier 23.5 2E+02 0.0067 25.5 7.4 33 11-46 30-62 (271)
438 1oi4_A Hypothetical protein YH 23.4 1.6E+02 0.0056 24.7 6.5 39 8-47 22-60 (193)
439 2fsv_C NAD(P) transhydrogenase 23.4 79 0.0027 26.8 4.0 37 10-46 47-86 (203)
440 3v8b_A Putative dehydrogenase, 23.3 2.5E+02 0.0084 25.2 8.0 34 10-46 28-61 (283)
441 3psh_A Protein HI_1472; substr 23.3 75 0.0026 29.4 4.5 37 109-148 76-113 (326)
442 3a10_A Response regulator; pho 23.3 1.6E+02 0.0056 21.4 5.9 37 112-150 39-82 (116)
443 3ax6_A Phosphoribosylaminoimid 23.3 1.1E+02 0.0037 29.0 5.8 34 9-47 1-34 (380)
444 1sqs_A Conserved hypothetical 23.2 83 0.0028 27.7 4.6 38 9-46 1-42 (242)
445 1uls_A Putative 3-oxoacyl-acyl 23.1 98 0.0033 27.2 5.1 33 11-46 6-38 (245)
446 3ot1_A 4-methyl-5(B-hydroxyeth 23.1 1.3E+02 0.0046 25.6 5.9 36 10-46 10-45 (208)
447 4h1h_A LMO1638 protein; MCCF-l 23.1 78 0.0027 29.6 4.6 27 295-321 63-89 (327)
448 1u9c_A APC35852; structural ge 23.0 1.4E+02 0.0049 25.7 6.1 37 10-46 6-51 (224)
449 3pdi_B Nitrogenase MOFE cofact 22.9 64 0.0022 31.9 4.1 34 109-147 366-399 (458)
450 1djl_A Transhydrogenase DIII; 22.9 81 0.0028 26.9 4.0 37 10-46 46-85 (207)
451 2iz1_A 6-phosphogluconate dehy 22.8 49 0.0017 32.9 3.2 34 7-45 3-36 (474)
452 3p0r_A Azoreductase; structura 22.8 78 0.0027 27.3 4.2 37 9-45 4-47 (211)
453 4e5v_A Putative THUA-like prot 22.8 90 0.0031 28.5 4.8 39 7-46 2-43 (281)
454 2g0u_A Type III secretion syst 22.7 71 0.0024 23.5 3.2 59 428-490 31-92 (92)
455 2z04_A Phosphoribosylaminoimid 22.7 89 0.003 29.4 5.0 34 9-47 1-34 (365)
456 3pef_A 6-phosphogluconate dehy 22.7 61 0.0021 29.4 3.7 32 10-46 2-33 (287)
457 3uug_A Multiple sugar-binding 22.6 4.2E+02 0.014 23.8 11.3 37 109-148 51-91 (330)
458 1zgz_A Torcad operon transcrip 22.6 1.3E+02 0.0044 22.3 5.2 39 111-151 39-83 (122)
459 3t7c_A Carveol dehydrogenase; 22.6 3.2E+02 0.011 24.6 8.8 34 10-46 28-61 (299)
460 3mzv_A Decaprenyl diphosphate 22.6 1.6E+02 0.0054 27.7 6.6 64 428-492 273-338 (341)
461 2pju_A Propionate catabolism o 22.6 1.8E+02 0.0062 25.4 6.6 35 109-149 146-180 (225)
462 3e5n_A D-alanine-D-alanine lig 22.5 48 0.0016 31.9 3.1 43 4-46 17-63 (386)
463 4hn9_A Iron complex transport 22.5 58 0.002 30.4 3.6 37 109-148 108-144 (335)
464 4gkb_A 3-oxoacyl-[acyl-carrier 22.4 2.5E+02 0.0085 25.0 7.7 35 10-47 7-41 (258)
465 3gt7_A Sensor protein; structu 22.4 1.1E+02 0.0039 24.1 5.0 40 108-149 41-89 (154)
466 4id9_A Short-chain dehydrogena 22.4 52 0.0018 30.6 3.3 36 7-46 17-52 (347)
467 3nhm_A Response regulator; pro 22.3 1.5E+02 0.0052 22.3 5.7 37 112-150 41-86 (133)
468 1i36_A Conserved hypothetical 22.3 66 0.0023 28.6 3.8 29 10-43 1-29 (264)
469 3la6_A Tyrosine-protein kinase 22.2 82 0.0028 28.7 4.5 41 8-48 90-132 (286)
470 2m1z_A LMO0427 protein; homolo 22.1 86 0.0029 23.9 3.7 38 9-46 2-42 (106)
471 2hpv_A FMN-dependent NADH-azor 22.1 86 0.0029 26.7 4.4 38 9-46 1-45 (208)
472 1h5q_A NADP-dependent mannitol 22.0 66 0.0022 28.5 3.7 32 11-45 15-46 (265)
473 3elf_A Fructose-bisphosphate a 21.9 1.9E+02 0.0064 27.3 6.8 16 132-147 36-51 (349)
474 3n74_A 3-ketoacyl-(acyl-carrie 21.9 1E+02 0.0036 27.1 5.1 33 11-46 10-42 (261)
475 1i24_A Sulfolipid biosynthesis 21.9 73 0.0025 30.3 4.3 35 7-45 9-43 (404)
476 2cvz_A Dehydrogenase, 3-hydrox 21.8 64 0.0022 29.1 3.7 31 9-45 1-31 (289)
477 3eme_A Rhodanese-like domain p 21.7 1.3E+02 0.0044 22.1 4.8 33 9-45 56-88 (103)
478 3qks_A DNA double-strand break 21.7 1.7E+02 0.0058 24.8 6.2 50 431-492 151-200 (203)
479 3m9w_A D-xylose-binding peripl 21.7 4.3E+02 0.015 23.5 9.6 83 8-147 1-89 (313)
480 1geg_A Acetoin reductase; SDR 21.6 2.6E+02 0.0089 24.4 7.7 33 11-46 3-35 (256)
481 2rjo_A Twin-arginine transloca 21.6 4.2E+02 0.014 23.9 9.5 36 110-148 54-95 (332)
482 3hr8_A Protein RECA; alpha and 21.5 5.1E+02 0.017 24.3 10.3 38 12-49 64-101 (356)
483 3r6w_A FMN-dependent NADH-azor 21.5 71 0.0024 27.5 3.7 38 9-46 1-44 (212)
484 3u7i_A FMN-dependent NADH-azor 21.4 91 0.0031 27.2 4.4 40 7-46 2-50 (223)
485 2p0t_A UPF0307 protein pspto_4 21.4 98 0.0033 26.0 4.3 57 428-493 82-138 (176)
486 3grk_A Enoyl-(acyl-carrier-pro 21.4 76 0.0026 28.9 4.1 35 10-46 31-66 (293)
487 3lzw_A Ferredoxin--NADP reduct 21.4 29 0.001 32.0 1.2 35 8-47 6-40 (332)
488 2pd6_A Estradiol 17-beta-dehyd 21.4 1.2E+02 0.0041 26.7 5.4 33 11-46 8-40 (264)
489 3md9_A Hemin-binding periplasm 21.3 71 0.0024 28.2 3.8 37 109-148 51-89 (255)
490 1e6u_A GDP-fucose synthetase; 21.3 54 0.0018 30.1 3.1 32 9-44 3-34 (321)
491 1ihu_A Arsenical pump-driving 21.2 92 0.0032 31.8 5.1 47 8-55 6-53 (589)
492 1tmy_A CHEY protein, TMY; chem 21.2 1.3E+02 0.0044 22.2 4.9 34 119-152 46-86 (120)
493 2vzf_A NADH-dependent FMN redu 21.1 92 0.0031 26.4 4.3 37 9-45 2-42 (197)
494 2gas_A Isoflavone reductase; N 21.1 69 0.0023 29.1 3.7 35 9-47 2-36 (307)
495 3sr3_A Microcin immunity prote 21.0 87 0.003 29.4 4.4 73 294-389 63-137 (336)
496 2rhc_B Actinorhodin polyketide 21.0 2.8E+02 0.0097 24.6 7.9 33 11-46 23-55 (277)
497 3cio_A ETK, tyrosine-protein k 20.9 95 0.0032 28.5 4.6 40 8-47 102-143 (299)
498 1zem_A Xylitol dehydrogenase; 20.9 3E+02 0.01 24.1 8.0 33 11-46 8-40 (262)
499 1o97_C Electron transferring f 20.9 1E+02 0.0035 27.8 4.7 39 108-148 102-146 (264)
500 3c85_A Putative glutathione-re 20.8 54 0.0018 27.3 2.7 34 8-46 38-72 (183)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.4e-64 Score=512.28 Aligned_cols=431 Identities=26% Similarity=0.424 Sum_probs=343.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNG--AAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSE 85 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~ 85 (496)
+++||+++|+|++||++|++.||+.|+++| +.|||++++.+...+.+.. .....+++|+.+| ++++++..
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~---~~~~~~i~~~~ip-----dglp~~~~ 83 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRS---NEFLPNIKYYNVH-----DGLPKGYV 83 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSS---SCCCTTEEEEECC-----CCCCTTCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccc---ccCCCCceEEecC-----CCCCCCcc
Confidence 478999999999999999999999999999 9999999975544332210 0013469999987 56776654
Q ss_pred cccCCCchhhHHHHHHHH-HhhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEEecchHHHHHHHhhhccc
Q 010988 86 NFDMLHSTDLLFNFFKSL-TLLQLPLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISFHGFSCFCLLCLYNLHTS 164 (496)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 164 (496)
.... ....+..+.... ..+.+.+.+++++.+.++|+||+|.+++|+..+|+++|||++.|+++++..+..+++.+..
T Consensus 84 ~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 161 (454)
T 3hbf_A 84 SSGN--PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLI 161 (454)
T ss_dssp CCSC--TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred ccCC--hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHH
Confidence 4332 123344444443 3456666666655345899999999999999999999999999999999998887765432
Q ss_pred ccc-c--ccCCCCCccccCCCCCCcCCcccccc--CC-C--CChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHHhh
Q 010988 165 KVH-E--NVTSKSDYFVVPGLPDQIEMTKVQVP--LM-R--ENSKDFGELVLAADMKSYGIIINTFEELESEYVKEYKKT 236 (496)
Q Consensus 165 ~~~-~--~~~~~~~~~~~p~l~~~~~l~~~~~~--~~-~--~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~ 236 (496)
... . .........++|+++. +..++++ +. + ..+..++.+..+...+++++++||+++||+++++.++..
T Consensus 162 ~~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~ 238 (454)
T 3hbf_A 162 REKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK 238 (454)
T ss_dssp HHTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTT
T ss_pred HhhcCCCccccccccccCCCCCC---cChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhc
Confidence 111 0 0011222335889875 7778887 22 1 224556667777788899999999999999999988876
Q ss_pred cCCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEEE
Q 010988 237 KGGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWV 316 (496)
Q Consensus 237 ~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~ 316 (496)
+ +++++|||+........ ...+.++.+||+.++++++|||||||....+.+++.+++.+++.++++|||+
T Consensus 239 ~-~~v~~vGPl~~~~~~~~---------~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~ 308 (454)
T 3hbf_A 239 F-KLLLNVGPFNLTTPQRK---------VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWS 308 (454)
T ss_dssp S-SCEEECCCHHHHSCCSC---------CCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEE
T ss_pred C-CCEEEECCccccccccc---------ccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEE
Confidence 6 79999999976432110 1135789999999888999999999999988999999999999999999999
Q ss_pred EeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEeccCCccccchh
Q 010988 317 IRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLFGDQFCN 396 (496)
Q Consensus 317 ~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~n 396 (496)
++... ... +|+++.++. ++|+++.+|+||.++|+|+++++||||||+||++|++++|||||++|++.||+.|
T Consensus 309 ~~~~~-----~~~--lp~~~~~~~-~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~N 380 (454)
T 3hbf_A 309 FRGDP-----KEK--LPKGFLERT-KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLN 380 (454)
T ss_dssp CCSCH-----HHH--SCTTHHHHT-TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred eCCcc-----hhc--CCHhHHhhc-CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHH
Confidence 97753 222 677776554 5789999999999999999988899999999999999999999999999999999
Q ss_pred HHHHHHH-hhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCChHHHH
Q 010988 397 EKLIVQV-LNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSSSLMI 475 (496)
Q Consensus 397 a~r~~e~-~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~ 475 (496)
|++++ + +|+|+.++.. .+++++|.++|+++|+| ++++.||+||+++++++++++++||||++++
T Consensus 381 a~~v~-~~~g~Gv~l~~~-------------~~~~~~l~~av~~ll~~-~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l 445 (454)
T 3hbf_A 381 TILTE-SVLEIGVGVDNG-------------VLTKESIKKALELTMSS-EKGGIMRQKIVKLKESAFKAVEQNGTSAMDF 445 (454)
T ss_dssp HHHHH-TTSCSEEECGGG-------------SCCHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHTSTTSHHHHHH
T ss_pred HHHHH-HhhCeeEEecCC-------------CCCHHHHHHHHHHHHCC-ChHHHHHHHHHHHHHHHHHhhccCCCHHHHH
Confidence 99994 7 6999999875 69999999999999986 4567899999999999999999999999999
Q ss_pred HHHHHHHhc
Q 010988 476 KLLIQDIMH 484 (496)
Q Consensus 476 ~~~~~~~~~ 484 (496)
++||+++++
T Consensus 446 ~~~v~~i~~ 454 (454)
T 3hbf_A 446 TTLIQIVTS 454 (454)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhC
Confidence 999999863
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.5e-60 Score=492.15 Aligned_cols=453 Identities=30% Similarity=0.516 Sum_probs=321.7
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCC-CCeEEEEeeCCccccC
Q 010988 1 MASEGSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSG-LPLQLIEIQFPYQEAG 79 (496)
Q Consensus 1 m~~~~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~i~~~~~~~~ 79 (496)
|+..+ ++++||+++|+|+.||++|++.||++|++|||+|||++++.+...+.+........+ .+++++.+| ++
T Consensus 1 ~~~~~-~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~ 74 (482)
T 2pq6_A 1 MGNFA-NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-----DG 74 (482)
T ss_dssp --------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC-----CC
T ss_pred CCccc-CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-----CC
Confidence 66554 567899999999999999999999999999999999999876655543211000011 378998887 24
Q ss_pred CCCCCCcccCCCchhhHHHHHHHH-HhhhHHHHHHHHhc-----CCCCeEEEEcCCCcchHHHHHhcCCCeEEEecchHH
Q 010988 80 IPEGSENFDMLHSTDLLFNFFKSL-TLLQLPLENLLKEL-----APKPSCIVSDMCYPWTVDTAARFNIPRISFHGFSCF 153 (496)
Q Consensus 80 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~~-----~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~~~~~~ 153 (496)
++......... .....+.... ..+...++++++.. ..+||+||+|.++.|+..+|+.+|||++.++++++.
T Consensus 75 lp~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~ 151 (482)
T 2pq6_A 75 LTPMEGDGDVS---QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSAC 151 (482)
T ss_dssp CC------------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHH
T ss_pred CCCcccccCcc---hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHH
Confidence 44310000000 1122233333 44556666776643 158999999999999999999999999999999987
Q ss_pred HHHHHhhhccc---ccccccC----C----CCCccccCCCCCCcCCcccccc--CCC----CChHHHHHHHHhhccccce
Q 010988 154 CLLCLYNLHTS---KVHENVT----S----KSDYFVVPGLPDQIEMTKVQVP--LMR----ENSKDFGELVLAADMKSYG 216 (496)
Q Consensus 154 ~~~~~~~~~~~---~~~~~~~----~----~~~~~~~p~l~~~~~l~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~ 216 (496)
.+..+.+.+.. ...+... . .....++|+++. +...+++ +.. ..+..++.+..+...+++.
T Consensus 152 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (482)
T 2pq6_A 152 SLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTT 228 (482)
T ss_dssp HHHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCC
T ss_pred HHHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCE
Confidence 76554332211 1111000 0 011113455543 3444444 111 1233344455666778899
Q ss_pred EEEcChhhhhHHHHHHHHhhcCCceEEeCcCcCC-CcCCchhhhhC--CCCcCChhhhccccCCCCCCeEEEEeeCCccC
Q 010988 217 IIINTFEELESEYVKEYKKTKGGKVWCLGPVSLC-NKQDIDKAERG--KKAAIDVSECLNWLDSWPPNSVVYVCLGSICN 293 (496)
Q Consensus 217 ~l~~s~~~le~~~~~~~~~~~~~~v~~VGpl~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~ 293 (496)
+++||+++||+++++.++..+ +++++|||+... +........+. ...+..+.++.+||+.++++++|||||||...
T Consensus 229 vl~nt~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~ 307 (482)
T 2pq6_A 229 ILLNTFNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTV 307 (482)
T ss_dssp EEESSCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSC
T ss_pred EEEcChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCccc
Confidence 999999999999999888877 799999999753 11100000000 11122345689999998888999999999988
Q ss_pred CChhhHHHHHHHHHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhh
Q 010988 294 LTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNS 373 (496)
Q Consensus 294 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs 373 (496)
.+.+++..++++++.++++|||+++... ...+... +|+++.++. ++|+++.+|+||.++|.|+++++||||||+||
T Consensus 308 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~-~~~~~~~--l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s 383 (482)
T 2pq6_A 308 MTPEQLLEFAWGLANCKKSFLWIIRPDL-VIGGSVI--FSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNS 383 (482)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECCGGG-STTTGGG--SCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHH
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEEcCCc-ccccccc--CcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCcch
Confidence 8888899999999999999999987542 1001111 566665554 67999999999999999999999999999999
Q ss_pred HHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHH
Q 010988 374 SLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKR 453 (496)
Q Consensus 374 ~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~ 453 (496)
++||+++|||||++|++.||+.||+++++++|+|+.++ . .+++++|.++|+++|+|++ ++.||+|
T Consensus 384 ~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~-------------~~~~~~l~~~i~~ll~~~~-~~~~r~~ 448 (482)
T 2pq6_A 384 TTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-T-------------NVKREELAKLINEVIAGDK-GKKMKQK 448 (482)
T ss_dssp HHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-S-------------SCCHHHHHHHHHHHHTSHH-HHHHHHH
T ss_pred HHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-C-------------CCCHHHHHHHHHHHHcCCc-HHHHHHH
Confidence 99999999999999999999999999943799999997 4 4999999999999998764 5789999
Q ss_pred HHHHHHHHHHHhhhCCChHHHHHHHHHHHhcC
Q 010988 454 AREFQMMAKRATEETGSSSLMIKLLIQDIMHQ 485 (496)
Q Consensus 454 a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~ 485 (496)
|+++++.+++|+++||||..++++|++++...
T Consensus 449 a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 449 AMELKKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHHHHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999998543
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=2.4e-59 Score=481.68 Aligned_cols=441 Identities=28% Similarity=0.464 Sum_probs=323.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcc--hhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQN-GAAITIVTTPAN--AARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEG 83 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~r-GH~Vt~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~ 83 (496)
.+++||+++|+|+.||++|++.||++|++| ||+|||++++.+ ...+..... ....+++|+.++... .++.
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~----~~~~ 76 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVD----LTDL 76 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCC----CTTS
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCC----CCCC
Confidence 356899999999999999999999999998 999999999873 444433210 013479999887431 1111
Q ss_pred CCcccCCCchhhHHHHHHHHHhhhHHHHHHHHhc--CCCC-eEEEEcCCCcchHHHHHhcCCCeEEEecchHHHHHHHhh
Q 010988 84 SENFDMLHSTDLLFNFFKSLTLLQLPLENLLKEL--APKP-SCIVSDMCYPWTVDTAARFNIPRISFHGFSCFCLLCLYN 160 (496)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~--~~~p-DlVI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~ 160 (496)
. .. ......+......+.+.+++++++. ..++ |+||+|.++.|+..+|+++|||++.++++++..+..+.+
T Consensus 77 -~---~~--~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 150 (480)
T 2vch_A 77 -S---SS--TRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLH 150 (480)
T ss_dssp -C---TT--CCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHH
T ss_pred -C---Cc--hhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHH
Confidence 0 01 1222333344455566677777652 2478 999999998999999999999999999999877666544
Q ss_pred hcccc--cccccCCCCCccccCCCCCCcCCcccccc--CCCC--ChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHH
Q 010988 161 LHTSK--VHENVTSKSDYFVVPGLPDQIEMTKVQVP--LMRE--NSKDFGELVLAADMKSYGIIINTFEELESEYVKEYK 234 (496)
Q Consensus 161 ~~~~~--~~~~~~~~~~~~~~p~l~~~~~l~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~ 234 (496)
.+... ....+........+|++++ +...+++ +... .....+.+..+...++.++++|++.+|++++...+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~ 227 (480)
T 2vch_A 151 LPKLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQ 227 (480)
T ss_dssp HHHHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHH
T ss_pred HHHHHhcCCCcccccCCcccCCCCCC---CChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHH
Confidence 33111 0000000011234566654 3333444 2111 122233334445567788999999999998877776
Q ss_pred hhc--CCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhCCCC
Q 010988 235 KTK--GGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKP 312 (496)
Q Consensus 235 ~~~--~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~ 312 (496)
... .+++++|||+........ .+..+.++.+||+.++++++|||||||....+.+++..+++|++.++++
T Consensus 228 ~~~~~~~~v~~vGpl~~~~~~~~--------~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~ 299 (480)
T 2vch_A 228 EPGLDKPPVYPVGPLVNIGKQEA--------KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQR 299 (480)
T ss_dssp SCCTTCCCEEECCCCCCCSCSCC-------------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCE
T ss_pred hcccCCCcEEEEecccccccccc--------CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCc
Confidence 421 268999999976432100 0114678999999988889999999999988889999999999999999
Q ss_pred eEEEEeCCCCCc-----------hhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhC
Q 010988 313 FIWVIRGGNNTS-----------KEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAG 381 (496)
Q Consensus 313 ~i~~~~~~~~~~-----------~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~G 381 (496)
|||+++... .. .+...+ +|+++.++....++++.+|+||.+||+|+++++||||||+||++||+++|
T Consensus 300 ~lw~~~~~~-~~~~~~~~~~~~~~~~~~~-lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~G 377 (480)
T 2vch_A 300 FLWVIRSPS-GIANSSYFDSHSQTDPLTF-LPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSG 377 (480)
T ss_dssp EEEEECCCC-SSTTTTTTCC--CSCGGGG-SCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHT
T ss_pred EEEEECCcc-ccccccccccccccchhhh-cCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcC
Confidence 999997642 10 112222 77788777767778887899999999999999999999999999999999
Q ss_pred CcEeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHH
Q 010988 382 VPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMA 461 (496)
Q Consensus 382 vP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~ 461 (496)
||||++|++.||+.||+++++++|+|+.++..+ ++.+++++|+++|+++|+++ +.+.||+||+++++++
T Consensus 378 vP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~----------~~~~~~~~l~~av~~vl~~~-~~~~~r~~a~~l~~~~ 446 (480)
T 2vch_A 378 IPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGD----------DGLVRREEVARVVKGLMEGE-EGKGVRNKMKELKEAA 446 (480)
T ss_dssp CCEEECCCSTTHHHHHHHHHHTTCCEECCCCCT----------TSCCCHHHHHHHHHHHHTST-HHHHHHHHHHHHHHHH
T ss_pred CCEEeccccccchHHHHHHHHHhCeEEEeeccc----------CCccCHHHHHHHHHHHhcCc-chHHHHHHHHHHHHHH
Confidence 999999999999999999635999999996531 12589999999999999843 4458999999999999
Q ss_pred HHHhhhCCChHHHHHHHHHHHhc
Q 010988 462 KRATEETGSSSLMIKLLIQDIMH 484 (496)
Q Consensus 462 ~~a~~~~g~~~~~~~~~~~~~~~ 484 (496)
++++++||++..++++||+++..
T Consensus 447 ~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 447 CRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999975
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=6.5e-59 Score=476.71 Aligned_cols=438 Identities=26% Similarity=0.431 Sum_probs=322.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcch-hhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTPANA-ARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEG 83 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~ 83 (496)
++++||+++|+|+.||++|++.||+.|++| ||+|||++++.+. ..+.+.+......+.+++|+.+|... +++
T Consensus 7 ~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~----~~~- 81 (463)
T 2acv_A 7 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVE----PPP- 81 (463)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCC----CCC-
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCC----CCc-
Confidence 356899999999999999999999999999 9999999998753 11222222212234579999987331 221
Q ss_pred CCcccCCCchhhHHHHHHHHHhhhHHHHHHHHhc-CCCCeEEEEcCCCcchHHHHHhcCCCeEEEecchHHHHHHHhhhc
Q 010988 84 SENFDMLHSTDLLFNFFKSLTLLQLPLENLLKEL-APKPSCIVSDMCYPWTVDTAARFNIPRISFHGFSCFCLLCLYNLH 162 (496)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~-~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 162 (496)
.+.. ...... +..........+++++++. ..+||+||+|.++.|+..+|+++|||++.++++++..+..+.+.+
T Consensus 82 ~~~~---~~~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 156 (463)
T 2acv_A 82 QELL---KSPEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLK 156 (463)
T ss_dssp GGGG---GSHHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGG
T ss_pred cccc---CCccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHH
Confidence 1100 111111 4444455666777777762 258999999999899999999999999999999988777665554
Q ss_pred ccccccccCCCCC---ccccCCC-CCCcCCcccccc--CCC-CChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHHh
Q 010988 163 TSKVHENVTSKSD---YFVVPGL-PDQIEMTKVQVP--LMR-ENSKDFGELVLAADMKSYGIIINTFEELESEYVKEYKK 235 (496)
Q Consensus 163 ~~~~~~~~~~~~~---~~~~p~l-~~~~~l~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~ 235 (496)
.......+..... ...+|++ ++ +...+++ +.. ......+.+..+...++.++++||+++||+++.+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~ 233 (463)
T 2acv_A 157 NRQIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYD 233 (463)
T ss_dssp GSCTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHH
T ss_pred hhcccCCCCCccccCceeECCCCCCC---CChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHh
Confidence 3221111111121 3456777 43 3444443 111 11223333334455677889999999999988877766
Q ss_pred hc--CCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCcc-CCChhhHHHHHHHHHhCCCC
Q 010988 236 TK--GGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSIC-NLTSSQMIELGLGLEASKKP 312 (496)
Q Consensus 236 ~~--~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~-~~~~~~~~~~~~a~~~~~~~ 312 (496)
.. ++++++|||+......... ...+..+.++.+||+.++++++|||||||.. ..+.+++..++++++..+++
T Consensus 234 ~~~p~~~v~~vGpl~~~~~~~~~-----~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~ 308 (463)
T 2acv_A 234 HDEKIPPIYAVGPLLDLKGQPNP-----KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVR 308 (463)
T ss_dssp HCTTSCCEEECCCCCCSSCCCBT-----TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCE
T ss_pred ccccCCcEEEeCCCccccccccc-----ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCc
Confidence 44 5799999999764320100 0001135788999999888899999999999 77888899999999999999
Q ss_pred eEEEEeCCCCCchhhhhhhhhHHHHHHhC-CCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEeccCCcc
Q 010988 313 FIWVIRGGNNTSKEIQEWLLEEKFEERVK-GRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLFG 391 (496)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~ 391 (496)
|||+++... . . +|+++.++.. ++|+++.+|+||.++|.|+++++||||||+||++|++++|||||++|++.
T Consensus 309 ~l~~~~~~~-~-----~--l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~ 380 (463)
T 2acv_A 309 FLWSNSAEK-K-----V--FPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYA 380 (463)
T ss_dssp EEEECCCCG-G-----G--SCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCST
T ss_pred EEEEECCCc-c-----c--CChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchh
Confidence 999998641 0 0 5555544321 45888889999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHhhceEEe-cccCCCCCCccccccc--ccCHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHHHHHhhh
Q 010988 392 DQFCNEKLIVQVLNIGVRI-GVEVPLDFGEEEEIGV--LVKKEDVVKAINMLMNE-GGERENRRKRAREFQMMAKRATEE 467 (496)
Q Consensus 392 DQ~~na~r~~e~~G~g~~l-~~~~~~~~~~~~~~~~--~~~~~~l~~~i~~lL~~-~~~~~~~~~~a~~l~~~~~~a~~~ 467 (496)
||+.||+++++++|+|+.+ ...+ +. .+++++|.++|+++|++ + .||+||+++++.+++++++
T Consensus 381 dQ~~Na~~lv~~~g~g~~l~~~~~----------~~~~~~~~~~l~~ai~~ll~~~~----~~r~~a~~l~~~~~~a~~~ 446 (463)
T 2acv_A 381 EQQLNAFRLVKEWGVGLGLRVDYR----------KGSDVVAAEEIEKGLKDLMDKDS----IVHKKVQEMKEMSRNAVVD 446 (463)
T ss_dssp THHHHHHHHHHTSCCEEESCSSCC----------TTCCCCCHHHHHHHHHHHTCTTC----THHHHHHHHHHHHHHHTST
T ss_pred hhHHHHHHHHHHcCeEEEEecccC----------CCCccccHHHHHHHHHHHHhccH----HHHHHHHHHHHHHHHHHhc
Confidence 9999999942699999999 3110 01 48999999999999973 4 8999999999999999999
Q ss_pred CCChHHHHHHHHHHHhc
Q 010988 468 TGSSSLMIKLLIQDIMH 484 (496)
Q Consensus 468 ~g~~~~~~~~~~~~~~~ 484 (496)
||||..++++||+++.+
T Consensus 447 gGss~~~l~~~v~~~~~ 463 (463)
T 2acv_A 447 GGSSLISVGKLIDDITG 463 (463)
T ss_dssp TSHHHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHhcC
Confidence 99999999999999853
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1e-58 Score=474.02 Aligned_cols=437 Identities=24% Similarity=0.416 Sum_probs=318.4
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCe--EEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCcccc
Q 010988 1 MASEGSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAA--ITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEA 78 (496)
Q Consensus 1 m~~~~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~--Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~ 78 (496)
|+.+ ++++||+++|+|+.||++|++.||+.|++|||+ ||+++++.+...+...... ....+++++.++ +
T Consensus 1 m~~~--~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~-----~ 71 (456)
T 2c1x_A 1 MSQT--TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDIS-----D 71 (456)
T ss_dssp --------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECC-----C
T ss_pred CCCC--CCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCC-----C
Confidence 5543 567899999999999999999999999999766 5778776443333221100 012468888876 3
Q ss_pred CCCCCCCcccCCCchhhHHHHHHHH-HhhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEEecchHHHHHH
Q 010988 79 GIPEGSENFDMLHSTDLLFNFFKSL-TLLQLPLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISFHGFSCFCLLC 157 (496)
Q Consensus 79 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~ 157 (496)
+++++..... ........+.... ..+.+.+.+++++.+.+||+||+|.++.|+..+|+.+|||++.++++++..+..
T Consensus 72 glp~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 149 (456)
T 2c1x_A 72 GVPEGYVFAG--RPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLST 149 (456)
T ss_dssp CCCTTCCCCC--CTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHH
T ss_pred CCCCcccccC--ChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHH
Confidence 4554432111 1123333333333 234444555543323589999999999999999999999999999998876655
Q ss_pred Hhhhccc----ccccccC-CCCCccccCCCCCCcCCcccccc--CC-C---CChHHHHHHHHhhccccceEEEcChhhhh
Q 010988 158 LYNLHTS----KVHENVT-SKSDYFVVPGLPDQIEMTKVQVP--LM-R---ENSKDFGELVLAADMKSYGIIINTFEELE 226 (496)
Q Consensus 158 ~~~~~~~----~~~~~~~-~~~~~~~~p~l~~~~~l~~~~~~--~~-~---~~~~~~~~~~~~~~~~~~~~l~~s~~~le 226 (496)
..+.... ....... ......++|+++. +...+++ +. . ..+...+.+......+++.+++|++++||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le 226 (456)
T 2c1x_A 150 HVYIDEIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELD 226 (456)
T ss_dssp HHTHHHHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGC
T ss_pred HhhhHHHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHh
Confidence 4332110 1000001 1122235677765 4445554 11 1 12334455555556778899999999999
Q ss_pred HHHHHHHHhhcCCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHH
Q 010988 227 SEYVKEYKKTKGGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGL 306 (496)
Q Consensus 227 ~~~~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~ 306 (496)
+++++.++..+ +++++|||+........ +..+.++.+|++..+++++|||||||....+.+++..+++++
T Consensus 227 ~~~~~~~~~~~-~~~~~vGpl~~~~~~~~---------~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l 296 (456)
T 2c1x_A 227 DSLTNDLKSKL-KTYLNIGPFNLITPPPV---------VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEAL 296 (456)
T ss_dssp HHHHHHHHHHS-SCEEECCCHHHHC------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcC-CCEEEecCcccCccccc---------ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHH
Confidence 99888887776 69999999875422110 012356889999888889999999999988888899999999
Q ss_pred HhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEec
Q 010988 307 EASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMIT 386 (496)
Q Consensus 307 ~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~ 386 (496)
+..+++|||+++... ... +|+++.++. ++|+++.+|+||.++|+|+++++||||||+||++||+++|||||+
T Consensus 297 ~~~~~~~lw~~~~~~-----~~~--l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~ 368 (456)
T 2c1x_A 297 EASRVPFIWSLRDKA-----RVH--LPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLIC 368 (456)
T ss_dssp HHHTCCEEEECCGGG-----GGG--SCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred HhcCCeEEEEECCcc-----hhh--CCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEe
Confidence 999999999997653 112 566655443 578999999999999999999999999999999999999999999
Q ss_pred cCCccccchhHHHHHHHh-hceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHh
Q 010988 387 WPLFGDQFCNEKLIVQVL-NIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRAT 465 (496)
Q Consensus 387 ~P~~~DQ~~na~r~~e~~-G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~ 465 (496)
+|++.||+.||++++ +. |+|+.+... .+++++|.++|+++|+|++ ++.||+||+++++.+++++
T Consensus 369 ~P~~~dQ~~Na~~l~-~~~g~g~~l~~~-------------~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~~~~~a~ 433 (456)
T 2c1x_A 369 RPFFGDQRLNGRMVE-DVLEIGVRIEGG-------------VFTKSGLMSCFDQILSQEK-GKKLRENLRALRETADRAV 433 (456)
T ss_dssp CCCSTTHHHHHHHHH-HTSCCEEECGGG-------------SCCHHHHHHHHHHHHHSHH-HHHHHHHHHHHHHHHHHHT
T ss_pred cCChhhHHHHHHHHH-HHhCeEEEecCC-------------CcCHHHHHHHHHHHHCCCc-HHHHHHHHHHHHHHHHHhh
Confidence 999999999999994 87 999999765 5999999999999998754 6789999999999999999
Q ss_pred hhCCChHHHHHHHHHHHhc
Q 010988 466 EETGSSSLMIKLLIQDIMH 484 (496)
Q Consensus 466 ~~~g~~~~~~~~~~~~~~~ 484 (496)
.+||||..++++||+++..
T Consensus 434 ~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 434 GPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp STTCHHHHHHHHHHHHHTS
T ss_pred hcCCcHHHHHHHHHHHHHh
Confidence 9999999999999999854
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=6e-44 Score=363.51 Aligned_cols=400 Identities=18% Similarity=0.196 Sum_probs=269.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCc
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSEN 86 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~ 86 (496)
|+||||+|+++++.||++|++.||++|+++||+|+|++++.+.+.+.+. +++++.++.. ++.+...
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~-----~~~~~~~ 75 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSI-----LPKESNP 75 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCC-----SCCTTCT
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCcc-----ccccccc
Confidence 6789999999999999999999999999999999999999877665543 6888777621 2222111
Q ss_pred ccC-CCc-hhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEEecchHHHHHHHhhhccc
Q 010988 87 FDM-LHS-TDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISFHGFSCFCLLCLYNLHTS 164 (496)
Q Consensus 87 ~~~-~~~-~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 164 (496)
... ... ...+..+......+.+.+.+++++ .+||+||+|.++.|+..+|+.+|||++.+++.+.........+...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 153 (424)
T 2iya_A 76 EESWPEDQESAMGLFLDEAVRVLPQLEDAYAD--DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAV 153 (424)
T ss_dssp TCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGG
T ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccc
Confidence 000 001 122233333344556677788877 7999999998888999999999999999987664111000000000
Q ss_pred ccccccCCCCCccccC-CCCCCcCCcc--ccccCCCCChHHHHHH------HHhhccccceEEEcChhhhhHHHHHHHHh
Q 010988 165 KVHENVTSKSDYFVVP-GLPDQIEMTK--VQVPLMRENSKDFGEL------VLAADMKSYGIIINTFEELESEYVKEYKK 235 (496)
Q Consensus 165 ~~~~~~~~~~~~~~~p-~l~~~~~l~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~s~~~le~~~~~~~~~ 235 (496)
....... ......| +......+.. .........+...+.+ ........+.+++++..+++++ ..
T Consensus 154 -~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~ 226 (424)
T 2iya_A 154 -QDPTADR-GEEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK-----GD 226 (424)
T ss_dssp -SCCCC----------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT-----GG
T ss_pred -ccccccc-ccccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC-----cc
Confidence 0000000 0000000 0000000000 0000000000011111 0011124567889998888742 24
Q ss_pred hcCCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEE
Q 010988 236 TKGGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIW 315 (496)
Q Consensus 236 ~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~ 315 (496)
.+++++++|||+... ..+..+|++..+++++|||++||......+.+..++++++..+++++|
T Consensus 227 ~~~~~~~~vGp~~~~-----------------~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~ 289 (424)
T 2iya_A 227 TVGDNYTFVGPTYGD-----------------RSHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVL 289 (424)
T ss_dssp GCCTTEEECCCCCCC-----------------CGGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEE
T ss_pred CCCCCEEEeCCCCCC-----------------cccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEE
Confidence 577899999997542 111336777656678999999999866677888999999988999999
Q ss_pred EEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEeccCCccccch
Q 010988 316 VIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLFGDQFC 395 (496)
Q Consensus 316 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~ 395 (496)
.++.+. ..+.... .++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.
T Consensus 290 ~~g~~~-~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~ 355 (424)
T 2iya_A 290 SVGRFV-DPADLGE-----------VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTM 355 (424)
T ss_dssp ECCTTS-CGGGGCS-----------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHH
T ss_pred EECCcC-ChHHhcc-----------CCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHH
Confidence 887654 2111111 2679999999999999999998 9999999999999999999999999999999
Q ss_pred hHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCChHHHH
Q 010988 396 NEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSSSLMI 475 (496)
Q Consensus 396 na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~ 475 (496)
||+++ ++.|+|+.++.. .+++++|.++|+++|+|+ .++++++++++.++ +.+| ...+
T Consensus 356 na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~---~~~~--~~~~ 412 (424)
T 2iya_A 356 NAERI-VELGLGRHIPRD-------------QVTAEKLREAVLAVASDP----GVAERLAAVRQEIR---EAGG--ARAA 412 (424)
T ss_dssp HHHHH-HHTTSEEECCGG-------------GCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH---TSCH--HHHH
T ss_pred HHHHH-HHCCCEEEcCcC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH---hcCc--HHHH
Confidence 99999 599999999776 589999999999999987 78999999988876 2233 3555
Q ss_pred HHHHHHHh
Q 010988 476 KLLIQDIM 483 (496)
Q Consensus 476 ~~~~~~~~ 483 (496)
.+.|.++.
T Consensus 413 ~~~i~~~~ 420 (424)
T 2iya_A 413 ADILEGIL 420 (424)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 56666554
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=7.5e-43 Score=352.51 Aligned_cols=368 Identities=16% Similarity=0.128 Sum_probs=235.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccc--cCCCCCCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQE--AGIPEGSE 85 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~--~~l~~~~~ 85 (496)
+.|||||+++|+.||++|+++||++|++|||+|||++++.+....+ .++.++.+...... ...+....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE----------AGLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT----------TTCEEEESSTTCCSHHHHSCCC--
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh----------cCCeeEecCCchhHhhhccccccc
Confidence 5689999999999999999999999999999999999987654322 25777666322111 00011111
Q ss_pred cccCC----Cc-hhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEEecchHHHHHHHhh
Q 010988 86 NFDML----HS-TDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISFHGFSCFCLLCLYN 160 (496)
Q Consensus 86 ~~~~~----~~-~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~ 160 (496)
..... .. ......+..........+.+++++ .+||+||+|.+++++..+|+.+|||++.+...+.........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~ 168 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS--WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGA 168 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHH
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhh
Confidence 00000 00 111222223333455667777888 799999999999999999999999999865443221111000
Q ss_pred hcccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhcccc-ceEEEcChhhhhHHHHHHHHhhcCC
Q 010988 161 LHTSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAADMKS-YGIIINTFEELESEYVKEYKKTKGG 239 (496)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~s~~~le~~~~~~~~~~~~~ 239 (496)
.... .......+..-..... ...+......+. .........+
T Consensus 169 ~~~~----------------------------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 211 (400)
T 4amg_A 169 LIRR----------------------------------AMSKDYERHGVTGEPTGSVRLTTTPPSVE---ALLPEDRRSP 211 (400)
T ss_dssp HHHH----------------------------------HTHHHHHHTTCCCCCSCEEEEECCCHHHH---HTSCGGGCCT
T ss_pred HHHH----------------------------------HHHHHHHHhCCCcccccchhhcccCchhh---ccCcccccCC
Confidence 0000 0000111100000001 111111111100 0000000112
Q ss_pred ceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCC--hhhHHHHHHHHHhCCCCeEEEE
Q 010988 240 KVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLT--SSQMIELGLGLEASKKPFIWVI 317 (496)
Q Consensus 240 ~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~--~~~~~~~~~a~~~~~~~~i~~~ 317 (496)
....+++.... ....+.+|++..+.+++||||+||..... .+.+..++++++..+.++||..
T Consensus 212 ~~~~~~~~~~~----------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~ 275 (400)
T 4amg_A 212 GAWPMRYVPYN----------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTL 275 (400)
T ss_dssp TCEECCCCCCC----------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEEC
T ss_pred cccCccccccc----------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEe
Confidence 22222222111 23455578888888999999999987633 4578889999999999999998
Q ss_pred eCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEeccCCccccchhH
Q 010988 318 RGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLFGDQFCNE 397 (496)
Q Consensus 318 ~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na 397 (496)
+... .. . .. ..++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|+..||+.||
T Consensus 276 ~~~~-~~-~-----~~------~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na 340 (400)
T 4amg_A 276 GGGD-LA-L-----LG------ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNR 340 (400)
T ss_dssp CTTC-CC-C-----CC------CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHH
T ss_pred cCcc-cc-c-----cc------cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHH
Confidence 7764 11 1 11 12689999999999999999888 999999999999999999999999999999999
Q ss_pred HHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCChHHHHHH
Q 010988 398 KLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSSSLMIKL 477 (496)
Q Consensus 398 ~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~ 477 (496)
+++ +++|+|+.++.. ..+++ +|+++|+|+ .||++|++++++++ ++.| ...+.+
T Consensus 341 ~~v-~~~G~g~~l~~~-------------~~~~~----al~~lL~d~----~~r~~a~~l~~~~~---~~~~--~~~~a~ 393 (400)
T 4amg_A 341 DVL-TGLGIGFDAEAG-------------SLGAE----QCRRLLDDA----GLREAALRVRQEMS---EMPP--PAETAA 393 (400)
T ss_dssp HHH-HHHTSEEECCTT-------------TCSHH----HHHHHHHCH----HHHHHHHHHHHHHH---TSCC--HHHHHH
T ss_pred HHH-HHCCCEEEcCCC-------------CchHH----HHHHHHcCH----HHHHHHHHHHHHHH---cCCC--HHHHHH
Confidence 999 599999999876 46654 667788988 89999999999987 3343 345556
Q ss_pred HHHHH
Q 010988 478 LIQDI 482 (496)
Q Consensus 478 ~~~~~ 482 (496)
.|+.+
T Consensus 394 ~le~l 398 (400)
T 4amg_A 394 XLVAL 398 (400)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66655
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=6.8e-41 Score=339.89 Aligned_cols=381 Identities=13% Similarity=0.113 Sum_probs=249.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCcccC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSENFDM 89 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~~~~ 89 (496)
|||+|+++++.||++|+++||++|+++||+|||++++...+.+.+ .+++++.++..... .+ ... ..
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~---------~g~~~~~i~~~~~~-~~-~~~---~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE---------VGVPHVPVGPSARA-PI-QRA---KP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCCEEECCC---------CC---SC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH---------cCCeeeeCCCCHHH-Hh-hcc---cc
Confidence 599999999999999999999999999999999999976554443 26888888743211 11 110 00
Q ss_pred CCchhhHHHHHHHHH-hhhHHHHHHHHhcCCCCeEEEEcC-CCcc--hHHHHHhcCCCeEEEecchHHHHHHHhhhcccc
Q 010988 90 LHSTDLLFNFFKSLT-LLQLPLENLLKELAPKPSCIVSDM-CYPW--TVDTAARFNIPRISFHGFSCFCLLCLYNLHTSK 165 (496)
Q Consensus 90 ~~~~~~~~~~~~~~~-~~~~~l~~ll~~~~~~pDlVI~D~-~~~~--a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 165 (496)
... ..+...+. .....++++++. ..+||+||+|. +..| +..+|+.+|||++.+++.+......
T Consensus 67 --~~~--~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~-------- 133 (415)
T 1iir_A 67 --LTA--EDVRRFTTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSP-------- 133 (415)
T ss_dssp --CCH--HHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS--------
T ss_pred --cch--HHHHHHHHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCc--------
Confidence 001 01111111 122334444431 26999999997 5668 8899999999999988776432100
Q ss_pred cccccCCCCCccccCCCCCCcCCcccccc--CCCCC----hHHHHHHHHhh------------ccccceEEEcChhhhhH
Q 010988 166 VHENVTSKSDYFVVPGLPDQIEMTKVQVP--LMREN----SKDFGELVLAA------------DMKSYGIIINTFEELES 227 (496)
Q Consensus 166 ~~~~~~~~~~~~~~p~l~~~~~l~~~~~~--~~~~~----~~~~~~~~~~~------------~~~~~~~l~~s~~~le~ 227 (496)
..+...... .++.+. ....+. +.+.. +......+... .... .+++++++++++
T Consensus 134 ---~~p~~~~~~---~~~~~~--~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~ 204 (415)
T 1iir_A 134 ---YYPPPPLGE---PSTQDT--IDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAP 204 (415)
T ss_dssp ---SSCCCC--------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSC
T ss_pred ---ccCCccCCc---cccchH--HHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcC
Confidence 000000000 010000 000000 00000 00011111111 1112 468888888763
Q ss_pred HHHHHHHhhcCCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHH
Q 010988 228 EYVKEYKKTKGGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLE 307 (496)
Q Consensus 228 ~~~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~ 307 (496)
. .+..+ ++++|||+...... ..+.++.+|++.. +++|||++||.. ...+....++++++
T Consensus 205 ~----~~~~~--~~~~vG~~~~~~~~------------~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~ 263 (415)
T 1iir_A 205 L----QPTDL--DAVQTGAWILPDER------------PLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIR 263 (415)
T ss_dssp C----CCCSS--CCEECCCCCCCCCC------------CCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHH
T ss_pred C----CcccC--CeEeeCCCccCccc------------CCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHH
Confidence 0 01112 79999998654221 1467788999764 369999999987 55777888999999
Q ss_pred hCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEecc
Q 010988 308 ASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITW 387 (496)
Q Consensus 308 ~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~ 387 (496)
..+.+++|+++... .. ... .++|+.+.+|+||.++|+.+++ ||||||+||++||+++|||+|++
T Consensus 264 ~~~~~~v~~~g~~~-~~--~~~-----------~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~ 327 (415)
T 1iir_A 264 AHGRRVILSRGWAD-LV--LPD-----------DGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILL 327 (415)
T ss_dssp HTTCCEEECTTCTT-CC--CSS-----------CGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEEC
T ss_pred HCCCeEEEEeCCCc-cc--ccC-----------CCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEEC
Confidence 99999999877654 11 011 1468999999999999977776 99999999999999999999999
Q ss_pred CCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhh
Q 010988 388 PLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEE 467 (496)
Q Consensus 388 P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~ 467 (496)
|...||+.||+++ ++.|+|+.++.. .++.++|.++|.++ +|+ .++++++++++.++ +
T Consensus 328 p~~~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~---~- 384 (415)
T 1iir_A 328 PQMADQPYYAGRV-AELGVGVAHDGP-------------IPTFDSLSAALATA-LTP----ETHARATAVAGTIR---T- 384 (415)
T ss_dssp CCSTTHHHHHHHH-HHHTSEEECSSS-------------SCCHHHHHHHHHHH-TSH----HHHHHHHHHHHHSC---S-
T ss_pred CCCCccHHHHHHH-HHCCCcccCCcC-------------CCCHHHHHHHHHHH-cCH----HHHHHHHHHHHHHh---h-
Confidence 9999999999999 699999999765 58999999999999 876 78888888888765 2
Q ss_pred CCChHHHHHHHHHHHhcCCC
Q 010988 468 TGSSSLMIKLLIQDIMHQPH 487 (496)
Q Consensus 468 ~g~~~~~~~~~~~~~~~~~~ 487 (496)
..+...+.+.|+++..++.
T Consensus 385 -~~~~~~~~~~i~~~~~~~~ 403 (415)
T 1iir_A 385 -DGAAVAARLLLDAVSREKP 403 (415)
T ss_dssp -CHHHHHHHHHHHHHHTC--
T ss_pred -cChHHHHHHHHHHHHhccc
Confidence 3345667777777765543
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=6.1e-40 Score=332.95 Aligned_cols=380 Identities=14% Similarity=0.149 Sum_probs=259.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCc
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSEN 86 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~ 86 (496)
.+||||+|+++++.||++|++.||++|+++||+|+|++++.+.+.+.+. ++.+..++... +.....
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~-----~~~~~~ 83 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSEI-----IDADAA 83 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCST-----TTCCHH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEeccccc-----cccccc
Confidence 5689999999999999999999999999999999999988776665542 68888876321 111000
Q ss_pred --ccCCCchhhHHH-HHHHHHhhhHHHHHHHHhcCCCCeEEEEc-CCCcchHHHHHhcCCCeEEEecchHHHHHHHhhhc
Q 010988 87 --FDMLHSTDLLFN-FFKSLTLLQLPLENLLKELAPKPSCIVSD-MCYPWTVDTAARFNIPRISFHGFSCFCLLCLYNLH 162 (496)
Q Consensus 87 --~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~~~~pDlVI~D-~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 162 (496)
.........+.. +..........+.+++++ .+||+||+| ...+++..+|+.+|||++.+.+...... .+...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~--~~~~~ 159 (415)
T 3rsc_A 84 EVFGSDDLGVRPHLMYLRENVSVLRATAEALDG--DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE--HYSFS 159 (415)
T ss_dssp HHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSS--SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS--SCCHH
T ss_pred hhhccccHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC--ccccc
Confidence 000011122222 333334455677788887 899999999 7777899999999999999764432100 00000
Q ss_pred ccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHh----------hccc-cceEEEcChhhhhHHHHH
Q 010988 163 TSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLA----------ADMK-SYGIIINTFEELESEYVK 231 (496)
Q Consensus 163 ~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~~l~~s~~~le~~~~~ 231 (496)
. .....+.+..+.. . . .....+.++.. .... .+..+.....+++
T Consensus 160 --------~-~~~~~~~~~~p~~--~--~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~----- 214 (415)
T 3rsc_A 160 --------Q-DMVTLAGTIDPLD--L--P-------VFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQ----- 214 (415)
T ss_dssp --------H-HHHHHHTCCCGGG--C--H-------HHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTS-----
T ss_pred --------c-ccccccccCChhh--H--H-------HHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccC-----
Confidence 0 0000000000000 0 0 00001111100 1111 1445555544444
Q ss_pred HHHhhcCCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhCCC
Q 010988 232 EYKKTKGGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKK 311 (496)
Q Consensus 232 ~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~ 311 (496)
.+...++.++.++||+... ..+..+|....+++++|||++||......+.+..++++++..++
T Consensus 215 ~~~~~~~~~~~~vGp~~~~-----------------~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~ 277 (415)
T 3rsc_A 215 IAGDTFDDRFVFVGPCFDD-----------------RRFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPW 277 (415)
T ss_dssp TTGGGCCTTEEECCCCCCC-----------------CGGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSC
T ss_pred CCcccCCCceEEeCCCCCC-----------------cccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCc
Confidence 3445567889999997543 12233466555567899999999987677788899999999889
Q ss_pred CeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEeccCCcc
Q 010988 312 PFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLFG 391 (496)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~ 391 (496)
+++|.++.+. ..+.... .++|+.+.+|+|+.++|+++++ +|||||.||+.||+++|+|+|++|...
T Consensus 278 ~~v~~~g~~~-~~~~l~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~ 343 (415)
T 3rsc_A 278 HVVMTLGGQV-DPAALGD-----------LPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSF 343 (415)
T ss_dssp EEEEECTTTS-CGGGGCC-----------CCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSG
T ss_pred EEEEEeCCCC-ChHHhcC-----------CCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcc
Confidence 9999887654 2111111 2679999999999999999888 999999999999999999999999999
Q ss_pred ccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCCh
Q 010988 392 DQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSS 471 (496)
Q Consensus 392 DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~ 471 (496)
||+.||.++ ++.|+|+.+..+ .+++++|.++|.++|+|+ .++++++++++.+.+ +++
T Consensus 344 ~q~~~a~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~----~~~- 400 (415)
T 3rsc_A 344 DVQPMARRV-DQLGLGAVLPGE-------------KADGDTLLAAVGAVAADP----ALLARVEAMRGHVRR----AGG- 400 (415)
T ss_dssp GGHHHHHHH-HHHTCEEECCGG-------------GCCHHHHHHHHHHHHTCH----HHHHHHHHHHHHHHH----SCH-
T ss_pred hHHHHHHHH-HHcCCEEEcccC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh----cCH-
Confidence 999999999 599999999876 589999999999999988 788888888888762 233
Q ss_pred HHHHHHHHHHHh
Q 010988 472 SLMIKLLIQDIM 483 (496)
Q Consensus 472 ~~~~~~~~~~~~ 483 (496)
...+.+.|.++.
T Consensus 401 ~~~~~~~i~~~~ 412 (415)
T 3rsc_A 401 AARAADAVEAYL 412 (415)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 345555555543
No 10
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=3.7e-39 Score=325.55 Aligned_cols=391 Identities=18% Similarity=0.186 Sum_probs=258.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCc
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSEN 86 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~ 86 (496)
|+|+||+|++.++.||++|++.||++|+++||+|++++++.+.+.+.. .++.++.++....... ....
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~---~~~~ 69 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA---------AGAEVVLYKSEFDTFH---VPEV 69 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH---------TTCEEEECCCGGGTSS---SSSS
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH---------cCCEEEeccccccccc---cccc
Confidence 567899999999999999999999999999999999998766555443 2688888763221110 0000
Q ss_pred ccCCCchhhHHH-HHHHHHhhhHHHHHHHHhcCCCCeEEEEc-CCCcchHHHHHhcCCCeEEEecchHHHHHHHhhhccc
Q 010988 87 FDMLHSTDLLFN-FFKSLTLLQLPLENLLKELAPKPSCIVSD-MCYPWTVDTAARFNIPRISFHGFSCFCLLCLYNLHTS 164 (496)
Q Consensus 87 ~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~~~~pDlVI~D-~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 164 (496)
.........+.. +..........+.+++++ .+||+||+| ...+++..+|+.+|||++.+.+....... +....
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~--~~~~~- 144 (402)
T 3ia7_A 70 VKQEDAETQLHLVYVRENVAILRAAEEALGD--NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH--YSLFK- 144 (402)
T ss_dssp SCCTTHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT--BCHHH-
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc--ccccc-
Confidence 000111122222 333333455677888888 899999999 77778999999999999987643321100 00000
Q ss_pred ccccccCCCCCccccCCCCCCcCCcccccc--CCCCChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHHhhcCCceE
Q 010988 165 KVHENVTSKSDYFVVPGLPDQIEMTKVQVP--LMRENSKDFGELVLAADMKSYGIIINTFEELESEYVKEYKKTKGGKVW 242 (496)
Q Consensus 165 ~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~v~ 242 (496)
. .........+.........+. ............+.. ...+..+.....+++ .+...++.++.
T Consensus 145 ----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~l~~~~~~~~-----~~~~~~~~~~~ 209 (402)
T 3ia7_A 145 ----E----LWKSNGQRHPADVEAVHSVLVDLLGKYGVDTPVKEYWD--EIEGLTIVFLPKSFQ-----PFAETFDERFA 209 (402)
T ss_dssp ----H----HHHHHTCCCGGGSHHHHHHHHHHHHTTTCCSCHHHHHT--CCCSCEEESSCGGGS-----TTGGGCCTTEE
T ss_pred ----c----ccccccccChhhHHHHHHHHHHHHHHcCCCCChhhhhc--CCCCeEEEEcChHhC-----CccccCCCCeE
Confidence 0 000000000000000000000 000000000001100 011445555544444 33455678899
Q ss_pred EeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEEEEeCCCC
Q 010988 243 CLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNN 322 (496)
Q Consensus 243 ~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~ 322 (496)
++||+... ..+...|+...+++++|||++||......+.+..++++++..+.+++|..+.+.
T Consensus 210 ~vGp~~~~-----------------~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 271 (402)
T 3ia7_A 210 FVGPTLTG-----------------RDGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFL- 271 (402)
T ss_dssp ECCCCCCC---------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTS-
T ss_pred EeCCCCCC-----------------cccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcC-
Confidence 99997543 122334665555678999999999877777888999999998899999888664
Q ss_pred CchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEeccCC-ccccchhHHHHH
Q 010988 323 TSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPL-FGDQFCNEKLIV 401 (496)
Q Consensus 323 ~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~-~~DQ~~na~r~~ 401 (496)
..+...+ .++|+.+.+|+|+.++|+++++ +|||||.||+.||+++|+|+|++|. ..||+.|+.++
T Consensus 272 ~~~~~~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~- 337 (402)
T 3ia7_A 272 DPAVLGP-----------LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERV- 337 (402)
T ss_dssp CGGGGCS-----------CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHH-
T ss_pred ChhhhCC-----------CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHH-
Confidence 2111111 2679999999999999999988 9999999999999999999999999 99999999999
Q ss_pred HHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHH
Q 010988 402 QVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSSSLMIKLLIQD 481 (496)
Q Consensus 402 e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~ 481 (496)
++.|+|+.+..+ .++++.|.++|.++|+|+ .++++++++++.+. +++ +...+.+.|.+
T Consensus 338 ~~~g~g~~~~~~-------------~~~~~~l~~~~~~ll~~~----~~~~~~~~~~~~~~----~~~-~~~~~~~~i~~ 395 (402)
T 3ia7_A 338 IELGLGSVLRPD-------------QLEPASIREAVERLAADS----AVRERVRRMQRDIL----SSG-GPARAADEVEA 395 (402)
T ss_dssp HHTTSEEECCGG-------------GCSHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH----TSC-HHHHHHHHHHH
T ss_pred HHcCCEEEccCC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHh----hCC-hHHHHHHHHHH
Confidence 599999999876 589999999999999988 78888888887765 223 34555555655
Q ss_pred Hh
Q 010988 482 IM 483 (496)
Q Consensus 482 ~~ 483 (496)
+.
T Consensus 396 ~~ 397 (402)
T 3ia7_A 396 YL 397 (402)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 11
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=9.7e-40 Score=331.57 Aligned_cols=383 Identities=12% Similarity=0.048 Sum_probs=249.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCcccC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSENFDM 89 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~~~~ 89 (496)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. +++++.++..... .... . ..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~-~~~~-~--~~- 66 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHM-MLQE-G--MP- 66 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGG-CCCT-T--SC-
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHH-HHhh-c--cc-
Confidence 5999999999999999999999999999999999998766555543 6888888643211 1111 0 00
Q ss_pred CCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcC-CCcc--hHHHHHhcCCCeEEEecchHHHHHHHhhhccccc
Q 010988 90 LHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDM-CYPW--TVDTAARFNIPRISFHGFSCFCLLCLYNLHTSKV 166 (496)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~-~~~~--a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 166 (496)
.........+ .......+.+.++....+||+||+|. +.++ +..+|+.+|||++.+++.+.....
T Consensus 67 ~~~~~~~~~~---~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~---------- 133 (416)
T 1rrv_A 67 PPPPEEEQRL---AAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS---------- 133 (416)
T ss_dssp CCCHHHHHHH---HHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC----------
T ss_pred cchhHHHHHH---HHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC----------
Confidence 0000111111 11111222222221126899999996 3556 888999999999998766532210
Q ss_pred ccccCCCCCcccc-CC-CCCCcCCcccccc-CCCCChHHHHHHHH------------hhccccceEEEcChhhhhHHHHH
Q 010988 167 HENVTSKSDYFVV-PG-LPDQIEMTKVQVP-LMRENSKDFGELVL------------AADMKSYGIIINTFEELESEYVK 231 (496)
Q Consensus 167 ~~~~~~~~~~~~~-p~-l~~~~~l~~~~~~-~~~~~~~~~~~~~~------------~~~~~~~~~l~~s~~~le~~~~~ 231 (496)
...+ +...... ++ +.+.+ ...... .....+.....++. +..... .+++++.++++++
T Consensus 134 -~~~p-~~~~~~~~~~r~~n~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~--- 205 (416)
T 1rrv_A 134 -PHLP-PAYDEPTTPGVTDIRV--LWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL--- 205 (416)
T ss_dssp -SSSC-CCBCSCCCTTCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC---
T ss_pred -cccC-CCCCCCCCchHHHHHH--HHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC---
Confidence 0000 0000000 11 00000 000000 00000000011111 111223 5788888887731
Q ss_pred HHHhhcCCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccC-CChhhHHHHHHHHHhCC
Q 010988 232 EYKKTKGGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICN-LTSSQMIELGLGLEASK 310 (496)
Q Consensus 232 ~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~-~~~~~~~~~~~a~~~~~ 310 (496)
... .++++|||+...... ..+.++.+|++.. +++|||++||... ...+.+..++++++..+
T Consensus 206 --~~~--~~~~~vG~~~~~~~~------------~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~ 267 (416)
T 1rrv_A 206 --QPD--VDAVQTGAWLLSDER------------PLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQG 267 (416)
T ss_dssp --CSS--CCCEECCCCCCCCCC------------CCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTT
T ss_pred --CCC--CCeeeECCCccCccC------------CCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCC
Confidence 111 279999998654221 1467788999764 4699999999864 34566788999999999
Q ss_pred CCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEeccCCc
Q 010988 311 KPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLF 390 (496)
Q Consensus 311 ~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~ 390 (496)
.++||+++... .. ... .++|+.+.+|+||.++|+.+++ ||||||+||++||+++|||+|++|..
T Consensus 268 ~~~v~~~g~~~-~~--~~~-----------~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~ 331 (416)
T 1rrv_A 268 RRVILSRGWTE-LV--LPD-----------DRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRN 331 (416)
T ss_dssp CCEEEECTTTT-CC--CSC-----------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred CeEEEEeCCcc-cc--ccC-----------CCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCC
Confidence 99999987654 10 001 2579999999999999977777 99999999999999999999999999
Q ss_pred cccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCC
Q 010988 391 GDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGS 470 (496)
Q Consensus 391 ~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~ 470 (496)
.||+.||+++ ++.|+|+.++.. ..++++|.++|+++ +|+ .++++++++++.++ + .++
T Consensus 332 ~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~---~-~~~ 388 (416)
T 1rrv_A 332 TDQPYFAGRV-AALGIGVAHDGP-------------TPTFESLSAALTTV-LAP----ETRARAEAVAGMVL---T-DGA 388 (416)
T ss_dssp BTHHHHHHHH-HHHTSEEECSSS-------------CCCHHHHHHHHHHH-TSH----HHHHHHHHHTTTCC---C-CHH
T ss_pred CCcHHHHHHH-HHCCCccCCCCC-------------CCCHHHHHHHHHHh-hCH----HHHHHHHHHHHHHh---h-cCc
Confidence 9999999999 699999999765 58999999999999 887 78888888887765 2 233
Q ss_pred hHHHHHHHH-HHHhcCC
Q 010988 471 SSLMIKLLI-QDIMHQP 486 (496)
Q Consensus 471 ~~~~~~~~~-~~~~~~~ 486 (496)
. .+.+.| +.+..+.
T Consensus 389 ~--~~~~~i~e~~~~~~ 403 (416)
T 1rrv_A 389 A--AAADLVLAAVGREK 403 (416)
T ss_dssp H--HHHHHHHHHHHC--
T ss_pred H--HHHHHHHHHHhccC
Confidence 3 455555 7765443
No 12
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.7e-38 Score=322.37 Aligned_cols=396 Identities=17% Similarity=0.182 Sum_probs=252.9
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCC
Q 010988 1 MASEGSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGI 80 (496)
Q Consensus 1 m~~~~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l 80 (496)
|+.. |+||||+|++.++.||++|++.||++|+++||+|++++++...+.+.+ .+++++.++.. .
T Consensus 1 M~~~--m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~---------~g~~~~~~~~~-----~ 64 (430)
T 2iyf_A 1 MTTQ--TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA---------TGPRPVLYHST-----L 64 (430)
T ss_dssp ---------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TSCEEEECCCC-----S
T ss_pred CCCc--cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEEcCCc-----C
Confidence 5555 567899999999999999999999999999999999999876544332 36888776522 1
Q ss_pred CCCCCccc--CCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEEecchHHHHHHH
Q 010988 81 PEGSENFD--MLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISFHGFSCFCLLCL 158 (496)
Q Consensus 81 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~ 158 (496)
+....... .......+..+..........+.+++++ .+||+||+|...+++..+|+.+|||++.+++.+..... .
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~-~ 141 (430)
T 2iyf_A 65 PGPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYAD--DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKG-Y 141 (430)
T ss_dssp CCTTSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTT--SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTT-H
T ss_pred ccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccc-c
Confidence 11111100 0000122222233334455677788887 79999999987778999999999999998755420000 0
Q ss_pred hhhcccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHH------HHhhccccceEEEcChhhhhHHHHHH
Q 010988 159 YNLHTSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGEL------VLAADMKSYGIIINTFEELESEYVKE 232 (496)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~s~~~le~~~~~~ 232 (496)
........... ....+++.. + .. .+..++.+ ........+.+++++...+++.
T Consensus 142 ~~~~~~~~~~~------~~~~~~~~~---~-~~-------~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~---- 200 (430)
T 2iyf_A 142 EEEVAEPMWRE------PRQTERGRA---Y-YA-------RFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH---- 200 (430)
T ss_dssp HHHTHHHHHHH------HHHSHHHHH---H-HH-------HHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT----
T ss_pred ccccccchhhh------hccchHHHH---H-HH-------HHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC----
Confidence 00000000000 000000000 0 00 00001110 0011123567888888777632
Q ss_pred HHhhcCCc-eEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhC-C
Q 010988 233 YKKTKGGK-VWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEAS-K 310 (496)
Q Consensus 233 ~~~~~~~~-v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~-~ 310 (496)
...++++ +++|||..... .+..+|....+++++||+++||......+.+..++++++.. +
T Consensus 201 -~~~~~~~~v~~vG~~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~ 262 (430)
T 2iyf_A 201 -ADRVDEDVYTFVGACQGDR-----------------AEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPG 262 (430)
T ss_dssp -GGGSCTTTEEECCCCC----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTT
T ss_pred -cccCCCccEEEeCCcCCCC-----------------CCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCC
Confidence 2346677 99999864321 11224655455678999999999855567788899999885 8
Q ss_pred CCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEeccCCc
Q 010988 311 KPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLF 390 (496)
Q Consensus 311 ~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~ 390 (496)
++++|.++.+. ..+. +. ..++||.+.+|+||.++|.++++ ||||||+||++||+++|+|+|++|..
T Consensus 263 ~~~~~~~G~~~-~~~~-----l~------~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~ 328 (430)
T 2iyf_A 263 WHLVLQIGRKV-TPAE-----LG------ELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQA 328 (430)
T ss_dssp EEEEEECC----CGGG-----GC------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred eEEEEEeCCCC-ChHH-----hc------cCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCc
Confidence 88988887654 2111 11 02579999999999999999988 99999999999999999999999999
Q ss_pred cccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCC
Q 010988 391 GDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGS 470 (496)
Q Consensus 391 ~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~ 470 (496)
.||+.|+.++ ++.|+|+.+... .++.++|.++|.++|+|+ .+++++++++..+.+ ++
T Consensus 329 ~~q~~~a~~~-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~---~~-- 385 (430)
T 2iyf_A 329 VDQFGNADML-QGLGVARKLATE-------------EATADLLRETALALVDDP----EVARRLRRIQAEMAQ---EG-- 385 (430)
T ss_dssp HHHHHHHHHH-HHTTSEEECCCC--------------CCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHH---HC--
T ss_pred cchHHHHHHH-HHcCCEEEcCCC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh---cC--
Confidence 9999999999 599999998765 589999999999999987 677777777776653 23
Q ss_pred hHHHHHHHHHHHhcCCCCCCc
Q 010988 471 SSLMIKLLIQDIMHQPHSDHQ 491 (496)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~ 491 (496)
+...+.+.|.++.......++
T Consensus 386 ~~~~~~~~i~~~~~~~~~~~~ 406 (430)
T 2iyf_A 386 GTRRAADLIEAELPARHERQE 406 (430)
T ss_dssp HHHHHHHHHHTTSCC------
T ss_pred cHHHHHHHHHHHhhccccccC
Confidence 345556666666555444443
No 13
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=4.2e-39 Score=325.39 Aligned_cols=368 Identities=13% Similarity=0.055 Sum_probs=248.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCcccC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSENFDM 89 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~~~~ 89 (496)
|||+|++.++.||++|++.||++|+++||+|+|++++...+.++.. ++.+..++...... .......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~~---~~~~~~~- 67 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRAG---AREPGEL- 67 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSGG---GSCTTCC-
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHHH---hccccCC-
Confidence 6999999999999999999999999999999999998766655543 68888886332211 0000000
Q ss_pred CCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCcch---HHHHHhcCCCeEEEecchHHHHHHHhhhccccc
Q 010988 90 LHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYPWT---VDTAARFNIPRISFHGFSCFCLLCLYNLHTSKV 166 (496)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~~a---~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 166 (496)
.......+..........+..++ .+||+||+|..+..+ ..+|+.+|||++.++.++.......+..
T Consensus 68 --~~~~~~~~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~----- 136 (404)
T 3h4t_A 68 --PPGAAEVVTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQA----- 136 (404)
T ss_dssp --CTTCGGGHHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHH-----
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHH-----
Confidence 00111122223333333444443 369999999665533 7899999999999876654210000000
Q ss_pred ccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhc-----------cccceEEEcChhhhhHHHHHHHHh
Q 010988 167 HENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAAD-----------MKSYGIIINTFEELESEYVKEYKK 235 (496)
Q Consensus 167 ~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~s~~~le~~~~~~~~~ 235 (496)
. ....... ....+.....+..... ......+.+..+.+.+ ..
T Consensus 137 ---------------~-----~~~~~~~-~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p------~~ 189 (404)
T 3h4t_A 137 ---------------E-----RDMYNQG-ADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSP------LR 189 (404)
T ss_dssp ---------------H-----HHHHHHH-HHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSC------CC
T ss_pred ---------------H-----HHHHHHH-HHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeC------CC
Confidence 0 0000000 0000000000000000 0011234455555542 22
Q ss_pred hcCCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEE
Q 010988 236 TKGGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIW 315 (496)
Q Consensus 236 ~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~ 315 (496)
+++++++++|++..+... .+++++.+|++. .+++|||++||... ..+.+..++++++..++++||
T Consensus 190 ~~~~~~~~~G~~~~~~~~------------~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~ 254 (404)
T 3h4t_A 190 PTDLGTVQTGAWILPDQR------------PLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVL 254 (404)
T ss_dssp TTCCSCCBCCCCCCCCCC------------CCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCeEEeCccccCCCC------------CCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEE
Confidence 355788999987554221 157788889875 35699999999987 677888999999999999999
Q ss_pred EEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEeccCCccccch
Q 010988 316 VIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLFGDQFC 395 (496)
Q Consensus 316 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~ 395 (496)
+.+... .. . +. .++|+.+.+|+||.++|+++++ ||||||.||+.||+++|||+|++|+..||+.
T Consensus 255 ~~g~~~-~~----~--~~-------~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~ 318 (404)
T 3h4t_A 255 SSGWAG-LG----R--ID-------EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPY 318 (404)
T ss_dssp ECTTTT-CC----C--SS-------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred EeCCcc-cc----c--cc-------CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHH
Confidence 887654 10 0 11 2679999999999999988887 9999999999999999999999999999999
Q ss_pred hHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCChHHHH
Q 010988 396 NEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSSSLMI 475 (496)
Q Consensus 396 na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~ 475 (496)
||+++ ++.|+|+.++.. .+++++|.++|.++|+ + .|+++++++++.+. + .+...+
T Consensus 319 na~~~-~~~G~g~~l~~~-------------~~~~~~l~~ai~~ll~-~----~~~~~~~~~~~~~~---~---~~~~~~ 373 (404)
T 3h4t_A 319 YAGRV-ADLGVGVAHDGP-------------TPTVESLSAALATALT-P----GIRARAAAVAGTIR---T---DGTTVA 373 (404)
T ss_dssp HHHHH-HHHTSEEECSSS-------------SCCHHHHHHHHHHHTS-H----HHHHHHHHHHTTCC---C---CHHHHH
T ss_pred HHHHH-HHCCCEeccCcC-------------CCCHHHHHHHHHHHhC-H----HHHHHHHHHHHHHh---h---hHHHHH
Confidence 99999 699999999876 5899999999999998 6 78888888888765 2 334555
Q ss_pred HHHHHHHhc
Q 010988 476 KLLIQDIMH 484 (496)
Q Consensus 476 ~~~~~~~~~ 484 (496)
.+.|.++..
T Consensus 374 ~~~i~~~~~ 382 (404)
T 3h4t_A 374 AKLLLEAIS 382 (404)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 555555543
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=2.5e-37 Score=310.50 Aligned_cols=363 Identities=12% Similarity=0.063 Sum_probs=248.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCcccc---CCCCCCCc
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEA---GIPEGSEN 86 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~---~l~~~~~~ 86 (496)
|||++++.++.||++|+++||++|+++||+|++++++...+.+.. .++.++.++...... ........
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG---------VGLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh---------CCCEEEEeCCcchHHHHhhhcccCcc
Confidence 599999999999999999999999999999999998865544333 268887775321000 00000000
Q ss_pred ccCCCchhhH----HH-HHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEEecchHHHHHHHhhh
Q 010988 87 FDMLHSTDLL----FN-FFKSLTLLQLPLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISFHGFSCFCLLCLYNL 161 (496)
Q Consensus 87 ~~~~~~~~~~----~~-~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 161 (496)
... ...... .. +..........+.+++++ .+||+||+|.+..++..+|+.+|||++.+...+...
T Consensus 72 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~------- 141 (384)
T 2p6p_A 72 AIP-SDPVAQARFTGRWFARMAASSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA------- 141 (384)
T ss_dssp CCC-CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC-------
T ss_pred ccC-cchHHHHHHHHHHHHhhHHHHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc-------
Confidence 000 100111 11 112223345567777777 699999999877788899999999999865321100
Q ss_pred cccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhc-----cccceEEEcChhhhhHHHHHHHHhh
Q 010988 162 HTSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAAD-----MKSYGIIINTFEELESEYVKEYKKT 236 (496)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~le~~~~~~~~~~ 236 (496)
..+.. .+.....++.... ..+..++.++...+++. ..
T Consensus 142 ------------------~~~~~--------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~------~~ 183 (384)
T 2p6p_A 142 ------------------DGIHP--------------GADAELRPELSELGLERLPAPDLFIDICPPSLRPA------NA 183 (384)
T ss_dssp ------------------TTTHH--------------HHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT------TS
T ss_pred ------------------chhhH--------------HHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC------CC
Confidence 00000 0001111111111 11456778887766521 11
Q ss_pred cC-CceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCC-----ChhhHHHHHHHHHhCC
Q 010988 237 KG-GKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNL-----TSSQMIELGLGLEASK 310 (496)
Q Consensus 237 ~~-~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~-----~~~~~~~~~~a~~~~~ 310 (496)
++ .++.+++ . . .+.++.+|++..+++++|||++||.... +.+.+..++++++..+
T Consensus 184 ~~~~~~~~~~-~--~----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~ 244 (384)
T 2p6p_A 184 APARMMRHVA-T--S----------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWD 244 (384)
T ss_dssp CCCEECCCCC-C--C----------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTT
T ss_pred CCCCceEecC-C--C----------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCC
Confidence 22 2233332 1 0 1234556877655667999999999764 4577889999999999
Q ss_pred CCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEeccCCc
Q 010988 311 KPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLF 390 (496)
Q Consensus 311 ~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~ 390 (496)
++++|+.++.. . +.+.. .++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|..
T Consensus 245 ~~~~~~~g~~~----------~-~~l~~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~ 308 (384)
T 2p6p_A 245 VELIVAAPDTV----------A-EALRA--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKG 308 (384)
T ss_dssp CEEEEECCHHH----------H-HHHHH--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCS
T ss_pred cEEEEEeCCCC----------H-HhhCC--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCc
Confidence 99999876432 1 11211 2679999 99999999988777 99999999999999999999999999
Q ss_pred cccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCC
Q 010988 391 GDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGS 470 (496)
Q Consensus 391 ~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~ 470 (496)
.||+.|+.++ ++.|+|+.++.. .+++++|.++|.++|+|+ .++++++++++.++ +..
T Consensus 309 ~dq~~~a~~~-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~---~~~-- 365 (384)
T 2p6p_A 309 SVLEAPARRV-ADYGAAIALLPG-------------EDSTEAIADSCQELQAKD----TYARRAQDLSREIS---GMP-- 365 (384)
T ss_dssp HHHHHHHHHH-HHHTSEEECCTT-------------CCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH---TSC--
T ss_pred ccchHHHHHH-HHCCCeEecCcC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH---hCC--
Confidence 9999999999 699999998765 589999999999999987 88999999998887 333
Q ss_pred hHHHHHHHHHHHhcCCC
Q 010988 471 SSLMIKLLIQDIMHQPH 487 (496)
Q Consensus 471 ~~~~~~~~~~~~~~~~~ 487 (496)
+...+.+.|..+.++-|
T Consensus 366 ~~~~~~~~i~~~~~~~~ 382 (384)
T 2p6p_A 366 LPATVVTALEQLAHHHH 382 (384)
T ss_dssp CHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHhhhcc
Confidence 35677777788877644
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.8e-37 Score=317.25 Aligned_cols=382 Identities=12% Similarity=0.072 Sum_probs=240.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCC---
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEG--- 83 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~--- 83 (496)
..||||+|++.++.||++|+++||++|+++||+|+|++++...+.+.. .+++++.++......++...
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~---------~G~~~~~i~~~~~~~~~~~~~~~ 88 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA---------AGLTAVPVGTDVDLVDFMTHAGH 88 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TTCCEEECSCCCCHHHHHHHTTH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh---------CCCceeecCCccchHHHhhhhhc
Confidence 467999999999999999999999999999999999999876544432 36888888633100000000
Q ss_pred --------CCcc---cCCCchhhHHH----HHHHHH-----h-hhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCC
Q 010988 84 --------SENF---DMLHSTDLLFN----FFKSLT-----L-LQLPLENLLKELAPKPSCIVSDMCYPWTVDTAARFNI 142 (496)
Q Consensus 84 --------~~~~---~~~~~~~~~~~----~~~~~~-----~-~~~~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgi 142 (496)
.... ........+.. +..... . ....+.+++++ .+||+||+|..++++..+|+.+||
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 89 DIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK--WRPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp HHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHHTC
T ss_pred ccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh--cCCCEEEecCcchhHHHHHHHcCC
Confidence 0000 00000111111 111111 1 44556666777 799999999877889999999999
Q ss_pred CeEEEecchHHHHHHHhhhcccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhcc---------c
Q 010988 143 PRISFHGFSCFCLLCLYNLHTSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAADM---------K 213 (496)
Q Consensus 143 P~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------~ 213 (496)
|++.+...+............ ...+.|... .. ..+...+.+...... .
T Consensus 167 P~v~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~----~~--------~~~~~~l~~~~~~~g~~~~~~~~~~ 223 (441)
T 2yjn_A 167 PHARLLWGPDITTRARQNFLG-----------LLPDQPEEH----RE--------DPLAEWLTWTLEKYGGPAFDEEVVV 223 (441)
T ss_dssp CEEEECSSCCHHHHHHHHHHH-----------HGGGSCTTT----CC--------CHHHHHHHHHHHHTTCCCCCGGGTS
T ss_pred CEEEEecCCCcchhhhhhhhh-----------hcccccccc----cc--------chHHHHHHHHHHHcCCCCCCccccC
Confidence 999986543221111000000 000111000 00 001112222221110 0
Q ss_pred cceEEEcChhhhhHHHHHHHHhhcCCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccC
Q 010988 214 SYGIIINTFEELESEYVKEYKKTKGGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICN 293 (496)
Q Consensus 214 ~~~~l~~s~~~le~~~~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~ 293 (496)
....+..+.+.+++ ...++ . ..+++.... .+.++.+|++..+++++|||++||...
T Consensus 224 ~~~~l~~~~~~~~~------~~~~~-~-~~~~~~~~~----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~ 279 (441)
T 2yjn_A 224 GQWTIDPAPAAIRL------DTGLK-T-VGMRYVDYN----------------GPSVVPEWLHDEPERRRVCLTLGISSR 279 (441)
T ss_dssp CSSEEECSCGGGSC------CCCCC-E-EECCCCCCC----------------SSCCCCGGGSSCCSSCEEEEEC-----
T ss_pred CCeEEEecCccccC------CCCCC-C-CceeeeCCC----------------CCcccchHhhcCCCCCEEEEECCCCcc
Confidence 12233333333221 01111 0 122222110 134566898876677899999999976
Q ss_pred C---ChhhHHHHHHHHHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCC
Q 010988 294 L---TSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCG 370 (496)
Q Consensus 294 ~---~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG 370 (496)
. ..+.+..++++++..++++||+.++.. ... +. ..++||.+.+|+||.++|+.+++ ||||||
T Consensus 280 ~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~--~~~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G 344 (441)
T 2yjn_A 280 ENSIGQVSIEELLGAVGDVDAEIIATFDAQQ--LEG-----VA------NIPDNVRTVGFVPMHALLPTCAA--TVHHGG 344 (441)
T ss_dssp -----CCSTTTTHHHHHTSSSEEEECCCTTT--TSS-----CS------SCCSSEEECCSCCHHHHGGGCSE--EEECCC
T ss_pred cccChHHHHHHHHHHHHcCCCEEEEEECCcc--hhh-----hc------cCCCCEEEecCCCHHHHHhhCCE--EEECCC
Confidence 3 345677888999989999999887543 111 11 02579999999999999988777 999999
Q ss_pred hhhHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHH
Q 010988 371 WNSSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENR 450 (496)
Q Consensus 371 ~gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~ 450 (496)
.||++||+++|||+|++|...||+.||.++ ++.|+|+.++.+ .+++++|.++|.++|+|+ .+
T Consensus 345 ~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~ 406 (441)
T 2yjn_A 345 PGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPVP-------------ELTPDQLRESVKRVLDDP----AH 406 (441)
T ss_dssp HHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCTT-------------TCCHHHHHHHHHHHHHCH----HH
T ss_pred HHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEcccc-------------cCCHHHHHHHHHHHhcCH----HH
Confidence 999999999999999999999999999999 599999999876 589999999999999987 88
Q ss_pred HHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHhc
Q 010988 451 RKRAREFQMMAKRATEETGSSSLMIKLLIQDIMH 484 (496)
Q Consensus 451 ~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 484 (496)
+++++++++.+. +..| ...+.+.|.++..
T Consensus 407 ~~~~~~~~~~~~---~~~~--~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 407 RAGAARMRDDML---AEPS--PAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHHHHHHH---TSCC--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---cCCC--HHHHHHHHHHHHH
Confidence 888888888876 3233 4556666666654
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=3.2e-35 Score=296.53 Aligned_cols=350 Identities=15% Similarity=0.129 Sum_probs=218.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCC----C
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIP----E 82 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~----~ 82 (496)
..+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.++.++.......+. .
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 83 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDRE 83 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTT
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhcc
Confidence 5689999999999999999999999999999999999987665555442 67887776211100000 0
Q ss_pred CCCcccCCCchh----hHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEEecchHHHHHHH
Q 010988 83 GSENFDMLHSTD----LLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISFHGFSCFCLLCL 158 (496)
Q Consensus 83 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~ 158 (496)
+........... ....+......+...+.+++++ .+||+||+|...+++..+|+.+|||++.+...........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~ 161 (398)
T 4fzr_A 84 GNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER--WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK 161 (398)
T ss_dssp SCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH
T ss_pred CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh
Confidence 000000000001 1111222233455677888888 7999999998778899999999999998654321110000
Q ss_pred hhhcccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhh-----ccccceEEEcChhhhhHHHHHHH
Q 010988 159 YNLHTSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAA-----DMKSYGIIINTFEELESEYVKEY 233 (496)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~s~~~le~~~~~~~ 233 (496)
... ...+.+.... .......+......+...
T Consensus 162 ~~~---------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 197 (398)
T 4fzr_A 162 SAG---------------------------------------VGELAPELAELGLTDFPDPLLSIDVCPPSMEAQ----- 197 (398)
T ss_dssp HHH---------------------------------------HHHTHHHHHTTTCSSCCCCSEEEECSCGGGC-------
T ss_pred HHH---------------------------------------HHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCC-----
Confidence 000 0000000000 001122333333333211
Q ss_pred HhhcCCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCC--------ChhhHHHHHHH
Q 010988 234 KKTKGGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNL--------TSSQMIELGLG 305 (496)
Q Consensus 234 ~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~--------~~~~~~~~~~a 305 (496)
.......+.++++.. ...++.+|+...+++++|||++||.... ..+.+..++++
T Consensus 198 ~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~a 259 (398)
T 4fzr_A 198 PKPGTTKMRYVPYNG------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQE 259 (398)
T ss_dssp --CCCEECCCCCCCC------------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHH
T ss_pred CCCCCCCeeeeCCCC------------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHH
Confidence 000001112222110 1233445665555678999999999653 45568889999
Q ss_pred HHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEe
Q 010988 306 LEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMI 385 (496)
Q Consensus 306 ~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v 385 (496)
++..+++++|+.++.. .+. +. ..++||.+.+|+|+.++|+++++ ||||||.||+.||+++|+|+|
T Consensus 260 l~~~~~~~v~~~~~~~--~~~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v 324 (398)
T 4fzr_A 260 LPKLGFEVVVAVSDKL--AQT-----LQ------PLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQV 324 (398)
T ss_dssp GGGGTCEEEECCCC---------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEE
T ss_pred HHhCCCEEEEEeCCcc--hhh-----hc------cCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEE
Confidence 9999999999876653 111 11 13689999999999999999888 999999999999999999999
Q ss_pred ccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 010988 386 TWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAK 462 (496)
Q Consensus 386 ~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~ 462 (496)
++|...||+.|+.++ ++.|+|+.++.. .++++.|.++|.++|+|+ .+++++++.+..+.
T Consensus 325 ~~p~~~~q~~~a~~~-~~~g~g~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 325 SVPVIAEVWDSARLL-HAAGAGVEVPWE-------------QAGVESVLAACARIRDDS----SYVGNARRLAAEMA 383 (398)
T ss_dssp ECCCSGGGHHHHHHH-HHTTSEEECC--------------------CHHHHHHHHHHCT----HHHHHHHHHHHHHT
T ss_pred ecCCchhHHHHHHHH-HHcCCEEecCcc-------------cCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHH
Confidence 999999999999999 699999999876 589999999999999999 78888888777765
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=4.9e-34 Score=287.88 Aligned_cols=364 Identities=15% Similarity=0.143 Sum_probs=237.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCC----
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPE---- 82 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~---- 82 (496)
.++|||+|++.++.||++|++.||++|.++||+|+++++ .+.+.+.. .++.++.++..........
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA---------AGLEVVDVAPDYSAVKVFEQVAK 87 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT---------TTCEEEESSTTCCHHHHHHHHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh---------CCCeeEecCCccCHHHHhhhccc
Confidence 457899999999999999999999999999999999999 65554432 3788888762210000000
Q ss_pred CCCc-------ccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEEecchHHHH
Q 010988 83 GSEN-------FDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISFHGFSCFCL 155 (496)
Q Consensus 83 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~ 155 (496)
.... ............+..........+.+++++ .+||+||+|...+++..+|+.+|||++..........
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~ 165 (398)
T 3oti_A 88 DNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD--YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTR 165 (398)
T ss_dssp HCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCT
T ss_pred CCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCcc
Confidence 0000 000001122233334445567788888888 7999999998888899999999999998543211000
Q ss_pred HHHhhhcccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHHh
Q 010988 156 LCLYNLHTSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAADMKSYGIIINTFEELESEYVKEYKK 235 (496)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~ 235 (496)
...+.+.. .+.....+...........+......+.. ...
T Consensus 166 ---------------------~~~~~~~~--------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 205 (398)
T 3oti_A 166 ---------------------GMHRSIAS--------------FLTDLMDKHQVSLPEPVATIESFPPSLLL-----EAE 205 (398)
T ss_dssp ---------------------THHHHHHT--------------TCHHHHHHTTCCCCCCSEEECSSCGGGGT-----TSC
T ss_pred ---------------------chhhHHHH--------------HHHHHHHHcCCCCCCCCeEEEeCCHHHCC-----CCC
Confidence 00000000 00111111100001112222222222210 000
Q ss_pred hcCCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCC--ChhhHHHHHHHHHhCCCCe
Q 010988 236 TKGGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNL--TSSQMIELGLGLEASKKPF 313 (496)
Q Consensus 236 ~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~--~~~~~~~~~~a~~~~~~~~ 313 (496)
.....+.++ |. .......+|+...+++++|||++||.... ..+.+..++++++..++++
T Consensus 206 ~~~~~~~~~-~~------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~ 266 (398)
T 3oti_A 206 PEGWFMRWV-PY------------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADF 266 (398)
T ss_dssp CCSBCCCCC-CC------------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEE
T ss_pred CCCCCcccc-CC------------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEE
Confidence 000001111 00 01334556776666778999999999653 5677889999999999999
Q ss_pred EEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEeccCCcccc
Q 010988 314 IWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLFGDQ 393 (496)
Q Consensus 314 i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ 393 (496)
+|+.++.. .+. +. ..++||.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||
T Consensus 267 v~~~g~~~--~~~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq 331 (398)
T 3oti_A 267 VLALGDLD--ISP-----LG------TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQ 331 (398)
T ss_dssp EEECTTSC--CGG-----GC------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCC
T ss_pred EEEECCcC--hhh-----hc------cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchh
Confidence 99887654 111 11 12679999999999999999888 99999999999999999999999999999
Q ss_pred chhH--HHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCCh
Q 010988 394 FCNE--KLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSS 471 (496)
Q Consensus 394 ~~na--~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~ 471 (496)
+.|+ .++ ++.|+|+.++.. ..+++.|. ++|+|+ .++++++++++.+. +..|
T Consensus 332 ~~~a~~~~~-~~~g~g~~~~~~-------------~~~~~~l~----~ll~~~----~~~~~~~~~~~~~~---~~~~-- 384 (398)
T 3oti_A 332 FQHTAREAV-SRRGIGLVSTSD-------------KVDADLLR----RLIGDE----SLRTAAREVREEMV---ALPT-- 384 (398)
T ss_dssp SSCTTHHHH-HHHTSEEECCGG-------------GCCHHHHH----HHHHCH----HHHHHHHHHHHHHH---TSCC--
T ss_pred HHHHHHHHH-HHCCCEEeeCCC-------------CCCHHHHH----HHHcCH----HHHHHHHHHHHHHH---hCCC--
Confidence 9999 999 699999999876 57888777 788888 88888888888876 2233
Q ss_pred HHHHHHHHHHHh
Q 010988 472 SLMIKLLIQDIM 483 (496)
Q Consensus 472 ~~~~~~~~~~~~ 483 (496)
...+.+.|.++.
T Consensus 385 ~~~~~~~l~~l~ 396 (398)
T 3oti_A 385 PAETVRRIVERI 396 (398)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 455666666654
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.8e-33 Score=282.99 Aligned_cols=365 Identities=13% Similarity=0.119 Sum_probs=233.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEe-eCCcccc-C----CCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEI-QFPYQEA-G----IPE 82 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i-~~~~~~~-~----l~~ 82 (496)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+.. .++.++.+ +...... . .+.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG---------AGLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH---------BTCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh---------CCCceeeecCCccchhhhhhhcccc
Confidence 3799999999999999999999999999999999998754443333 26777776 3111000 0 000
Q ss_pred CCCcccCCCchhhHHHHHHHHHhh-------hHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEEecchHHHH
Q 010988 83 GSENFDMLHSTDLLFNFFKSLTLL-------QLPLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISFHGFSCFCL 155 (496)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~ 155 (496)
................+......+ ...+.++++. .+||+||+|...+++..+|+.+|||++.+........
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~ 149 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA--WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTA 149 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTT
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh--cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcccc
Confidence 000000011111222222222233 6677888888 7999999998777888899999999998643321000
Q ss_pred HHHhhhcccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhc-----cccceEEEcChhhhhHHHH
Q 010988 156 LCLYNLHTSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAAD-----MKSYGIIINTFEELESEYV 230 (496)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~le~~~~ 230 (496)
. ... . .....+.+..... ......+.....+++
T Consensus 150 ~--------------------~~~----~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 187 (391)
T 3tsa_A 150 G--------------------PFS----D--------------RAHELLDPVCRHHGLTGLPTPELILDPCPPSLQ---- 187 (391)
T ss_dssp T--------------------HHH----H--------------HHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGS----
T ss_pred c--------------------ccc----c--------------hHHHHHHHHHHHcCCCCCCCCceEEEecChhhc----
Confidence 0 000 0 0001111111111 011223333322222
Q ss_pred HHHHhhcCCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccC--CC-hhhHHHHHHHHH
Q 010988 231 KEYKKTKGGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICN--LT-SSQMIELGLGLE 307 (496)
Q Consensus 231 ~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~--~~-~~~~~~~~~a~~ 307 (496)
.........+.++ |.. .......|+...+++++||+++||... .. .+.+..++++ +
T Consensus 188 -~~~~~~~~~~~~~-p~~------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~ 246 (391)
T 3tsa_A 188 -ASDAPQGAPVQYV-PYN------------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-T 246 (391)
T ss_dssp -CTTSCCCEECCCC-CCC------------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-H
T ss_pred -CCCCCccCCeeee-cCC------------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-c
Confidence 0000001111222 110 123344677666677899999999853 23 6678888888 8
Q ss_pred hC-CCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEec
Q 010988 308 AS-KKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMIT 386 (496)
Q Consensus 308 ~~-~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~ 386 (496)
.. +++++|..++.. ... +. ..++|+.+.+|+|+.++|+.+++ ||||||.||++||+++|+|+|+
T Consensus 247 ~~p~~~~v~~~~~~~-----~~~--l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~ 311 (391)
T 3tsa_A 247 ELPGVEAVIAVPPEH-----RAL--LT------DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLV 311 (391)
T ss_dssp TSTTEEEEEECCGGG-----GGG--CT------TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEE
T ss_pred cCCCeEEEEEECCcc-----hhh--cc------cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEe
Confidence 77 888888876542 111 21 12679999999999999977777 9999999999999999999999
Q ss_pred cCCccccchhHHHHHHHhhceEEecc--cCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHH
Q 010988 387 WPLFGDQFCNEKLIVQVLNIGVRIGV--EVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRA 464 (496)
Q Consensus 387 ~P~~~DQ~~na~r~~e~~G~g~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a 464 (496)
+|...||+.|+.++ ++.|+|+.+.. + ..+++.|.++|.++|+|+ .+++++++++..+.
T Consensus 312 ~p~~~~q~~~a~~~-~~~g~g~~~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~-- 371 (391)
T 3tsa_A 312 LPQYFDQFDYARNL-AAAGAGICLPDEQA-------------QSDHEQFTDSIATVLGDT----GFAAAAIKLSDEIT-- 371 (391)
T ss_dssp CCCSTTHHHHHHHH-HHTTSEEECCSHHH-------------HTCHHHHHHHHHHHHTCT----HHHHHHHHHHHHHH--
T ss_pred cCCcccHHHHHHHH-HHcCCEEecCcccc-------------cCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH--
Confidence 99999999999999 69999999987 5 489999999999999999 77888887777765
Q ss_pred hhhCCChHHHHHHHHHHHhcC
Q 010988 465 TEETGSSSLMIKLLIQDIMHQ 485 (496)
Q Consensus 465 ~~~~g~~~~~~~~~~~~~~~~ 485 (496)
+..| ...+.+.|.++...
T Consensus 372 -~~~~--~~~~~~~i~~~~~~ 389 (391)
T 3tsa_A 372 -AMPH--PAALVRTLENTAAI 389 (391)
T ss_dssp -TSCC--HHHHHHHHHHC---
T ss_pred -cCCC--HHHHHHHHHHHHhc
Confidence 2233 35666666666543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=5.1e-31 Score=266.86 Aligned_cols=367 Identities=16% Similarity=0.175 Sum_probs=239.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCC------------
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFP------------ 74 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~------------ 74 (496)
..+|||+|++.++.||++|++.||++|+++||+|++++++...+.+.. .++.++.++..
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~ 88 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK---------LGFEPVATGMPVFDGFLAALRIR 88 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCEEEECCCCHHHHHHHHHHHH
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh---------cCCceeecCcccccchhhhhhhh
Confidence 457999999999999999999999999999999999999865443333 26888877620
Q ss_pred ccccCCCCCCCcccCCCchhhHHHHHHH-HHhhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEEecchHH
Q 010988 75 YQEAGIPEGSENFDMLHSTDLLFNFFKS-LTLLQLPLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISFHGFSCF 153 (496)
Q Consensus 75 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~~~~~~ 153 (496)
......+. ....... ......+... .......+.+++++ .+||+||+|...+++..+|+.+|||++........
T Consensus 89 ~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 163 (412)
T 3otg_A 89 FDTDSPEG-LTPEQLS--ELPQIVFGRVIPQRVFDELQPVIER--LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDT 163 (412)
T ss_dssp HSCSCCTT-CCHHHHT--TSHHHHHHTHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCC
T ss_pred hcccCCcc-CChhHhh--HHHHHHHhccchHHHHHHHHHHHHh--cCCCEEEECchhhHHHHHHHHcCCCEEEecccccC
Confidence 00000010 0000000 0111111111 22334677788888 79999999987778888999999999985433210
Q ss_pred HHHHHhhhcccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhh----------ccccceEEEcChh
Q 010988 154 CLLCLYNLHTSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAA----------DMKSYGIIINTFE 223 (496)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~s~~ 223 (496)
..... . .+...+.+.... ...++.++..+..
T Consensus 164 ~~~~~-------------------------~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~ 204 (412)
T 3otg_A 164 PDDLT-------------------------R--------------SIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPP 204 (412)
T ss_dssp CSHHH-------------------------H--------------HHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCG
T ss_pred chhhh-------------------------H--------------HHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCH
Confidence 00000 0 000001111000 1123334444433
Q ss_pred hhhHHHHHHHHhhcCCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccc-cCCCCCCeEEEEeeCCccCCChhhHHHH
Q 010988 224 ELESEYVKEYKKTKGGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNW-LDSWPPNSVVYVCLGSICNLTSSQMIEL 302 (496)
Q Consensus 224 ~le~~~~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~vI~vs~GS~~~~~~~~~~~~ 302 (496)
.++. +...+......+.+.... ......+| ....+++++||+++||......+.+..+
T Consensus 205 ~~~~-----~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~ 263 (412)
T 3otg_A 205 SLQE-----PEFRARPRRHELRPVPFA----------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAA 263 (412)
T ss_dssp GGSC-----HHHHTCTTEEECCCCCCC----------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHH
T ss_pred HhcC-----CcccCCCCcceeeccCCC----------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHH
Confidence 3331 111111111112111111 12233445 2323456799999999976667788899
Q ss_pred HHHHHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhhHHHHHHhCC
Q 010988 303 GLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGV 382 (496)
Q Consensus 303 ~~a~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~Gv 382 (496)
+++++..+.+++|+.+... ..+.... .++||.+.+|+|+.++|.++++ ||+|||.||++||+++|+
T Consensus 264 ~~~l~~~~~~~~~~~g~~~-~~~~l~~-----------~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~ 329 (412)
T 3otg_A 264 IDGLAGLDADVLVASGPSL-DVSGLGE-----------VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGV 329 (412)
T ss_dssp HHHHHTSSSEEEEECCSSC-CCTTCCC-----------CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEEECCCC-Chhhhcc-----------CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCC
Confidence 9999988999999887664 2221111 2579999999999999999888 999999999999999999
Q ss_pred cEeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 010988 383 PMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAK 462 (496)
Q Consensus 383 P~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~ 462 (496)
|+|++|...||..|+..+ ++.|+|..+... .+++++|.++|.++|+|+ .+++++.+.+..+.
T Consensus 330 P~v~~p~~~~q~~~~~~v-~~~g~g~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 391 (412)
T 3otg_A 330 PQLSFPWAGDSFANAQAV-AQAGAGDHLLPD-------------NISPDSVSGAAKRLLAEE----SYRAGARAVAAEIA 391 (412)
T ss_dssp CEEECCCSTTHHHHHHHH-HHHTSEEECCGG-------------GCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH
T ss_pred CEEecCCchhHHHHHHHH-HHcCCEEecCcc-------------cCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHh
Confidence 999999999999999999 699999999886 589999999999999988 66777666666654
Q ss_pred HHhhhCCChHHHHHHHHHHHhc
Q 010988 463 RATEETGSSSLMIKLLIQDIMH 484 (496)
Q Consensus 463 ~a~~~~g~~~~~~~~~~~~~~~ 484 (496)
++ .+ ...+.+.+.++..
T Consensus 392 ---~~-~~-~~~~~~~~~~l~~ 408 (412)
T 3otg_A 392 ---AM-PG-PDEVVRLLPGFAS 408 (412)
T ss_dssp ---HS-CC-HHHHHTTHHHHHC
T ss_pred ---cC-CC-HHHHHHHHHHHhc
Confidence 22 33 4555555555543
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=7.6e-30 Score=253.61 Aligned_cols=350 Identities=13% Similarity=0.111 Sum_probs=208.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCcccC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSENFDM 89 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~~~~ 89 (496)
.||+|...++.||++|.++||++|.++||+|+|+++....+. +.+. ..++.++.++.. ++... ...
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~--~~v~-----~~g~~~~~i~~~----~~~~~-~~~-- 68 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIEN--DLVP-----KAGLPLHLIQVS----GLRGK-GLK-- 68 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHH--HHTG-----GGTCCEEECC-----------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhh--chhh-----hcCCcEEEEECC----CcCCC-CHH--
Confidence 489999988899999999999999999999999998754321 1111 125777777622 11110 000
Q ss_pred CCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCc--chHHHHHhcCCCeEEEecchHHHHHHHhhhcccccc
Q 010988 90 LHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYP--WTVDTAARFNIPRISFHGFSCFCLLCLYNLHTSKVH 167 (496)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~--~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 167 (496)
..+......... .....+++++ .+||+||++..+. .+..+|+.+|||+++.
T Consensus 69 ----~~~~~~~~~~~~-~~~~~~~l~~--~~PDvVi~~g~~~s~p~~laA~~~~iP~vih-------------------- 121 (365)
T 3s2u_A 69 ----SLVKAPLELLKS-LFQALRVIRQ--LRPVCVLGLGGYVTGPGGLAARLNGVPLVIH-------------------- 121 (365)
T ss_dssp --------CHHHHHHH-HHHHHHHHHH--HCCSEEEECSSSTHHHHHHHHHHTTCCEEEE--------------------
T ss_pred ----HHHHHHHHHHHH-HHHHHHHHHh--cCCCEEEEcCCcchHHHHHHHHHcCCCEEEE--------------------
Confidence 111111111111 1234566777 6999999996555 4556889999999962
Q ss_pred cccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHHhhcCCceEEeCcC
Q 010988 168 ENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAADMKSYGIIINTFEELESEYVKEYKKTKGGKVWCLGPV 247 (496)
Q Consensus 168 ~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~v~~VGpl 247 (496)
....+|++.+ ++. ...+..++. ++++-. ....+..++|+.
T Consensus 122 -------e~n~~~G~~n---------------------r~l--~~~a~~v~~-~~~~~~---------~~~~k~~~~g~p 161 (365)
T 3s2u_A 122 -------EQNAVAGTAN---------------------RSL--APIARRVCE-AFPDTF---------PASDKRLTTGNP 161 (365)
T ss_dssp -------ECSSSCCHHH---------------------HHH--GGGCSEEEE-SSTTSS---------CC---CEECCCC
T ss_pred -------ecchhhhhHH---------------------Hhh--ccccceeee-cccccc---------cCcCcEEEECCC
Confidence 1112232211 111 111223332 222211 112567778854
Q ss_pred cCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhC----CCCeEEEEeCCCCC
Q 010988 248 SLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEAS----KKPFIWVIRGGNNT 323 (496)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~----~~~~i~~~~~~~~~ 323 (496)
....... ... ......+++++|+|..||... ......+.++++.+ +..++|+.+...
T Consensus 162 vr~~~~~-------------~~~--~~~~~~~~~~~ilv~gGs~g~--~~~~~~~~~al~~l~~~~~~~vi~~~G~~~-- 222 (365)
T 3s2u_A 162 VRGELFL-------------DAH--ARAPLTGRRVNLLVLGGSLGA--EPLNKLLPEALAQVPLEIRPAIRHQAGRQH-- 222 (365)
T ss_dssp CCGGGCC-------------CTT--SSCCCTTSCCEEEECCTTTTC--SHHHHHHHHHHHTSCTTTCCEEEEECCTTT--
T ss_pred Cchhhcc-------------chh--hhcccCCCCcEEEEECCcCCc--cccchhhHHHHHhcccccceEEEEecCccc--
Confidence 3321110 111 111122356699999999865 22334456676653 345666665543
Q ss_pred chhhhhhhhhHHHHHHhCCCcEEEeCcchhh-hhhccccccccccCCChhhHHHHHHhCCcEeccCCc----cccchhHH
Q 010988 324 SKEIQEWLLEEKFEERVKGRGILILGWAPQV-LILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLF----GDQFCNEK 398 (496)
Q Consensus 324 ~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~-~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~----~DQ~~na~ 398 (496)
.+. +.+... ..+.++.+.+|+++. +++..+++ +|||+|.+|+.|++++|+|+|.+|+. .+|..||+
T Consensus 223 ~~~-----~~~~~~--~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~ 293 (365)
T 3s2u_A 223 AEI-----TAERYR--TVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAE 293 (365)
T ss_dssp HHH-----HHHHHH--HTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHH
T ss_pred ccc-----ccceec--ccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHH
Confidence 111 111111 135688999999874 69988888 99999999999999999999999974 57999999
Q ss_pred HHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHH
Q 010988 399 LIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSSSLMIKLL 478 (496)
Q Consensus 399 r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~ 478 (496)
.+ ++.|+|+.++.+ .++++.|.++|.++|+|++..+.|++++++++. . .+...|.+.
T Consensus 294 ~l-~~~G~a~~l~~~-------------~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~--------~-~aa~~ia~~ 350 (365)
T 3s2u_A 294 FL-VRSGAGRLLPQK-------------STGAAELAAQLSEVLMHPETLRSMADQARSLAK--------P-EATRTVVDA 350 (365)
T ss_dssp HH-HTTTSEEECCTT-------------TCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCC--------T-THHHHHHHH
T ss_pred HH-HHCCCEEEeecC-------------CCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCC--------c-cHHHHHHHH
Confidence 99 599999999876 589999999999999999766666666665432 1 234555555
Q ss_pred HHHH-hcCCCCCCc
Q 010988 479 IQDI-MHQPHSDHQ 491 (496)
Q Consensus 479 ~~~~-~~~~~~~~~ 491 (496)
|.++ .+--|..|.
T Consensus 351 i~~larG~e~~~~~ 364 (365)
T 3s2u_A 351 CLEVARGLEHHHHH 364 (365)
T ss_dssp HHHHC---------
T ss_pred HHHHHccchhcccC
Confidence 5555 333443343
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=9.4e-27 Score=205.71 Aligned_cols=162 Identities=25% Similarity=0.428 Sum_probs=138.7
Q ss_pred ChhhhccccCCCCCCeEEEEeeCCccC-CChhhHHHHHHHHHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcE
Q 010988 267 DVSECLNWLDSWPPNSVVYVCLGSICN-LTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGI 345 (496)
Q Consensus 267 ~~~~~~~~l~~~~~~~vI~vs~GS~~~-~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv 345 (496)
++.++.+|++..+++++|||++||... .....+..++++++..+.+++|+.++.. .. . .++|+
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~----------~~-~-----~~~~v 70 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK----------PD-T-----LGLNT 70 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC----------CT-T-----CCTTE
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC----------cc-c-----CCCcE
Confidence 688999999876677899999999964 4667788899999988899999987653 11 0 15699
Q ss_pred EEeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccc
Q 010988 346 LILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIG 425 (496)
Q Consensus 346 ~v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~ 425 (496)
.+.+|+|+.+++.++.+++||||||.||++||+++|+|+|++|...||..||.++ ++.|+|+.++..
T Consensus 71 ~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~------------ 137 (170)
T 2o6l_A 71 RLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFN------------ 137 (170)
T ss_dssp EEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTT------------
T ss_pred EEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEeccc------------
Confidence 9999999999997777777999999999999999999999999999999999999 699999999876
Q ss_pred cccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 010988 426 VLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAK 462 (496)
Q Consensus 426 ~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~ 462 (496)
.++.++|.++|.++|+|+ .|+++++++++.++
T Consensus 138 -~~~~~~l~~~i~~ll~~~----~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 138 -TMSSTDLLNALKRVINDP----SYKENVMKLSRIQH 169 (170)
T ss_dssp -TCCHHHHHHHHHHHHHCH----HHHHHHHHHC----
T ss_pred -cCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHhh
Confidence 589999999999999987 79999999988875
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.87 E-value=5.3e-21 Score=189.81 Aligned_cols=350 Identities=12% Similarity=0.061 Sum_probs=207.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCcccC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSENFDM 89 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~~~~ 89 (496)
|||++++.+..||..++..|+++|.++||+|++++...... .+.. ...++.++.++... +...
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~--~~~~-----~~~g~~~~~~~~~~----~~~~------ 69 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRME--ADLV-----PKHGIEIDFIRISG----LRGK------ 69 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH--HHHG-----GGGTCEEEECCCCC----CTTC------
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcch--hhhc-----cccCCceEEecCCc----cCcC------
Confidence 89999998778999999999999999999999999865321 1111 11257777665321 1110
Q ss_pred CCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCC--cchHHHHHhcCCCeEEEecchHHHHHHHhhhcccccc
Q 010988 90 LHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCY--PWTVDTAARFNIPRISFHGFSCFCLLCLYNLHTSKVH 167 (496)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~--~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 167 (496)
.....+....... .....+.++++. .+||+|+++... ..+..+++.+|+|++......
T Consensus 70 -~~~~~~~~~~~~~-~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~---------------- 129 (364)
T 1f0k_A 70 -GIKALIAAPLRIF-NAWRQARAIMKA--YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG---------------- 129 (364)
T ss_dssp -CHHHHHTCHHHHH-HHHHHHHHHHHH--HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS----------------
T ss_pred -ccHHHHHHHHHHH-HHHHHHHHHHHh--cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC----------------
Confidence 0001111011111 123456667777 699999998643 245667888999998632110
Q ss_pred cccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHHhhcCCceEEeCcC
Q 010988 168 ENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAADMKSYGIIINTFEELESEYVKEYKKTKGGKVWCLGPV 247 (496)
Q Consensus 168 ~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~v~~VGpl 247 (496)
.++ ...+. ....++.++..+... + +++..||..
T Consensus 130 -----------~~~---------------------~~~~~--~~~~~d~v~~~~~~~------------~-~~~~~i~n~ 162 (364)
T 1f0k_A 130 -----------IAG---------------------LTNKW--LAKIATKVMQAFPGA------------F-PNAEVVGNP 162 (364)
T ss_dssp -----------SCC---------------------HHHHH--HTTTCSEEEESSTTS------------S-SSCEECCCC
T ss_pred -----------CCc---------------------HHHHH--HHHhCCEEEecChhh------------c-CCceEeCCc
Confidence 000 00111 112334444433111 2 256667643
Q ss_pred cCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhC--CCCeEEEEeCCCCCch
Q 010988 248 SLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEAS--KKPFIWVIRGGNNTSK 325 (496)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~~ 325 (496)
..... . . .+. ..+.+...+++++|++..|+... ......+++|++.. +.++++..+.+.
T Consensus 163 v~~~~-----~---~----~~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~---- 223 (364)
T 1f0k_A 163 VRTDV-----L---A----LPL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS---- 223 (364)
T ss_dssp CCHHH-----H---T----SCC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC----
T ss_pred cchhh-----c---c----cch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch----
Confidence 21100 0 0 000 01111122345678888888753 33344555666654 456666666654
Q ss_pred hhhhhhhhHHHHHHhCCCcEEEeCcch-hhhhhccccccccccCCChhhHHHHHHhCCcEeccCCc---cccchhHHHHH
Q 010988 326 EIQEWLLEEKFEERVKGRGILILGWAP-QVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLF---GDQFCNEKLIV 401 (496)
Q Consensus 326 ~~~~~~lp~~~~~~~~~~nv~v~~~~p-q~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~---~DQ~~na~r~~ 401 (496)
..+ +.+.. .....+||.+.+|++ ...++..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+
T Consensus 224 -~~~--l~~~~-~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~- 296 (364)
T 1f0k_A 224 -QQS--VEQAY-AEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL- 296 (364)
T ss_dssp -HHH--HHHHH-HHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH-
T ss_pred -HHH--HHHHH-hhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHH-
Confidence 111 22111 122235899999994 4678988888 99999989999999999999999987 7999999999
Q ss_pred HHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHH
Q 010988 402 QVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSSSLMIKLLIQD 481 (496)
Q Consensus 402 e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~ 481 (496)
.+.|.|..++.. ..+.++|.++|.++ |++.++.+.++++++ .+..+....++.+.+-
T Consensus 297 ~~~g~g~~~~~~-------------d~~~~~la~~i~~l--~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 353 (364)
T 1f0k_A 297 EKAGAAKIIEQP-------------QLSVDAVANTLAGW--SRETLLTMAERARAA--------SIPDATERVANEVSRV 353 (364)
T ss_dssp HHTTSEEECCGG-------------GCCHHHHHHHHHTC--CHHHHHHHHHHHHHT--------CCTTHHHHHHHHHHHH
T ss_pred HhCCcEEEeccc-------------cCCHHHHHHHHHhc--CHHHHHHHHHHHHHh--------hccCHHHHHHHHHHHH
Confidence 599999988775 47799999999988 664444444443332 2345556667777777
Q ss_pred HhcCCCCCCcc
Q 010988 482 IMHQPHSDHQH 492 (496)
Q Consensus 482 ~~~~~~~~~~~ 492 (496)
+.+..|..|.|
T Consensus 354 y~~~~~~~~~~ 364 (364)
T 1f0k_A 354 ARALEHHHHHH 364 (364)
T ss_dssp HTTC-------
T ss_pred HHHHHhhccCC
Confidence 77777766654
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.60 E-value=4.5e-14 Score=133.31 Aligned_cols=118 Identities=9% Similarity=0.095 Sum_probs=90.1
Q ss_pred CCeEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHh-CCCcEEEeCcchhh-hhh
Q 010988 280 PNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERV-KGRGILILGWAPQV-LIL 357 (496)
Q Consensus 280 ~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~-~~l 357 (496)
..+.|+|++|.... ......+++++.... ++.++.+.+. . .. +.+.... ...|+.+..|+++. +++
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~-~--~~------~~l~~~~~~~~~v~v~~~~~~m~~~m 223 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSN-P--NL------KKLQKFAKLHNNIRLFIDHENIAKLM 223 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTC-T--TH------HHHHHHHHTCSSEEEEESCSCHHHHH
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCc-h--HH------HHHHHHHhhCCCEEEEeCHHHHHHHH
Confidence 45689999997643 335567888877654 5666666654 2 11 2222211 24589999999875 589
Q ss_pred ccccccccccCCChhhHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEeccc
Q 010988 358 SHPSIGGFLTHCGWNSSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVE 413 (496)
Q Consensus 358 ~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~ 413 (496)
..+++ +||+|| +|+.|+++.|+|+|++|...+|..||+.+ ++.|+|+.+..-
T Consensus 224 ~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~~~ 275 (282)
T 3hbm_A 224 NESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYKYL 275 (282)
T ss_dssp HTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECGGG
T ss_pred HHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcchh
Confidence 88888 999999 89999999999999999999999999999 599999998764
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.56 E-value=5.8e-15 Score=133.77 Aligned_cols=127 Identities=12% Similarity=0.079 Sum_probs=88.2
Q ss_pred CCCeEEEEeeCCccCCChhhHHHH-----HHHHHhCC-CCeEEEEeCCCCC-c-hhh-hhh-------hhhHHH------
Q 010988 279 PPNSVVYVCLGSICNLTSSQMIEL-----GLGLEASK-KPFIWVIRGGNNT-S-KEI-QEW-------LLEEKF------ 336 (496)
Q Consensus 279 ~~~~vI~vs~GS~~~~~~~~~~~~-----~~a~~~~~-~~~i~~~~~~~~~-~-~~~-~~~-------~lp~~~------ 336 (496)
+++++|||+.||... -.+.+..+ ++++...+ .++++++|... . . ... ..+ ++|.+.
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~-~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 103 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNY-SSEFEHLVQERGGQRESQKIPIDQFGCGDT 103 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSS-CCCCCSHHHHHTCEECSCCCSSCTTCTTCS
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCc-hhhHHHHHHhhhcccccccccccccccccc
Confidence 456799999999842 23334433 47887777 79999988765 1 0 000 010 001000
Q ss_pred HH----HhCCCcEEEeCcchhh-hhhc-cccccccccCCChhhHHHHHHhCCcEeccCCc----cccchhHHHHHHHhhc
Q 010988 337 EE----RVKGRGILILGWAPQV-LILS-HPSIGGFLTHCGWNSSLEAISAGVPMITWPLF----GDQFCNEKLIVQVLNI 406 (496)
Q Consensus 337 ~~----~~~~~nv~v~~~~pq~-~~l~-~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~----~DQ~~na~r~~e~~G~ 406 (496)
.. ....-++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. -||..||+++ ++.|+
T Consensus 104 ~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l-~~~G~ 180 (224)
T 2jzc_A 104 ARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF-VELGY 180 (224)
T ss_dssp CEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH-HHHSC
T ss_pred ccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH-HHCCC
Confidence 00 0001256788998875 7898 8888 99999999999999999999999984 3699999999 59999
Q ss_pred eEEe
Q 010988 407 GVRI 410 (496)
Q Consensus 407 g~~l 410 (496)
|+.+
T Consensus 181 ~~~~ 184 (224)
T 2jzc_A 181 VWSC 184 (224)
T ss_dssp CCEE
T ss_pred EEEc
Confidence 8765
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.46 E-value=3.9e-11 Score=119.60 Aligned_cols=332 Identities=12% Similarity=0.035 Sum_probs=184.5
Q ss_pred CCCCEEEEEcC--C--CccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCC
Q 010988 7 SQQPHFVLFPF--L--AQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPE 82 (496)
Q Consensus 7 ~~~~~il~~~~--~--~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~ 82 (496)
|+||||++++. + ..|.-.-+..+++.| +||+|++++............ ...++.++.++...
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~------- 67 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRSV------- 67 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSSS-------
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEccccc-------
Confidence 56889999974 3 377788899999999 799999999876543212211 23467777765210
Q ss_pred CCCcccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCc--chHHHHHhcCCCeEEEecchHHHHHHHhh
Q 010988 83 GSENFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYP--WTVDTAARFNIPRISFHGFSCFCLLCLYN 160 (496)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~--~a~~~A~~lgiP~v~~~~~~~~~~~~~~~ 160 (496)
. ... . .....+.++++. .+||+|++..... ....+++.+++|.+++.........
T Consensus 68 ~------~~~---~--------~~~~~l~~~~~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~---- 124 (394)
T 3okp_A 68 M------LPT---P--------TTAHAMAEIIRE--REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW---- 124 (394)
T ss_dssp C------CSC---H--------HHHHHHHHHHHH--TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH----
T ss_pred c------ccc---h--------hhHHHHHHHHHh--cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh----
Confidence 0 000 0 223456677787 7999999864433 4556788899995543222111100
Q ss_pred hcccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHHhhc--C
Q 010988 161 LHTSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAADMKSYGIIINTFEELESEYVKEYKKTK--G 238 (496)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~--~ 238 (496)
. .. .............++.++..|-...+ .+.+.+ .
T Consensus 125 ------------------~---~~----------------~~~~~~~~~~~~~~d~ii~~s~~~~~-----~~~~~~~~~ 162 (394)
T 3okp_A 125 ------------------S---ML----------------PGSRQSLRKIGTEVDVLTYISQYTLR-----RFKSAFGSH 162 (394)
T ss_dssp ------------------T---TS----------------HHHHHHHHHHHHHCSEEEESCHHHHH-----HHHHHHCSS
T ss_pred ------------------h---hc----------------chhhHHHHHHHHhCCEEEEcCHHHHH-----HHHHhcCCC
Confidence 0 00 00111122234566777777744322 233322 2
Q ss_pred CceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHh-----CCCCe
Q 010988 239 GKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEA-----SKKPF 313 (496)
Q Consensus 239 ~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~-----~~~~~ 313 (496)
.++..|..-.....-... .......+.+.+.-. ++..+++..|+... ...+..+++|++. .+.++
T Consensus 163 ~~~~vi~ngv~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l 232 (394)
T 3okp_A 163 PTFEHLPSGVDVKRFTPA-------TPEDKSATRKKLGFT-DTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQL 232 (394)
T ss_dssp SEEEECCCCBCTTTSCCC-------CHHHHHHHHHHTTCC-TTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEE
T ss_pred CCeEEecCCcCHHHcCCC-------CchhhHHHHHhcCCC-cCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEE
Confidence 467777643221110000 000112233333222 23356677788643 2234444455443 25555
Q ss_pred EEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhh---hhcccccccccc-----------CCChhhHHHHHH
Q 010988 314 IWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVL---ILSHPSIGGFLT-----------HCGWNSSLEAIS 379 (496)
Q Consensus 314 i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~---~l~~~~~~~~I~-----------HGG~gs~~eal~ 379 (496)
++ +|.+. ..+...+ +. .-..++|.+.+|+|+.+ ++..+++ +|. -|.-+++.||++
T Consensus 233 ~i-~G~g~-~~~~l~~------~~-~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a 301 (394)
T 3okp_A 233 LI-VGSGR-YESTLRR------LA-TDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQA 301 (394)
T ss_dssp EE-ECCCT-THHHHHH------HT-GGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHH
T ss_pred EE-EcCch-HHHHHHH------HH-hcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHH
Confidence 44 44443 2212111 10 11247999999997554 6777777 665 555668999999
Q ss_pred hCCcEeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Q 010988 380 AGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQM 459 (496)
Q Consensus 380 ~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~ 459 (496)
+|+|+|+.+.. .....+ +. |.|..++. -+.+++.++|.++++|++..+.+.+++++...
T Consensus 302 ~G~PvI~~~~~----~~~e~i-~~-~~g~~~~~---------------~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 360 (394)
T 3okp_A 302 CGVPVIAGTSG----GAPETV-TP-ATGLVVEG---------------SDVDKLSELLIELLDDPIRRAAMGAAGRAHVE 360 (394)
T ss_dssp TTCCEEECSST----TGGGGC-CT-TTEEECCT---------------TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEeCCC----ChHHHH-hc-CCceEeCC---------------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 99999997653 233334 23 36776654 37899999999999987666666666665543
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.45 E-value=8.1e-12 Score=124.06 Aligned_cols=348 Identities=14% Similarity=0.050 Sum_probs=177.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcchhhHHHHHHhhhcCCCCeEE-EEeeCCccccCCCCCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQN-GAAITIVTTPANAARFKTVVARAMQSGLPLQL-IEIQFPYQEAGIPEGS 84 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~i~~~~~~~~l~~~~ 84 (496)
..||||++++.. .+.......|+++|.++ ||+|.++++............ ..++.+ ..++ +..
T Consensus 3 ~~mmkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-------~~~-- 67 (376)
T 1v4v_A 3 GGMKRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS-----LFGIQEDRNLD-------VMQ-- 67 (376)
T ss_dssp -CCEEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH-----TTTCCCSEECC-------CCS--
T ss_pred CCceEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHH-----HcCCCcccccc-------cCC--
Confidence 346899999843 33445567889999998 899888776543332222211 122322 1221 100
Q ss_pred CcccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcC--CC-cchHHHHHhcCCCeEEEecchHHHHHHHhhh
Q 010988 85 ENFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDM--CY-PWTVDTAARFNIPRISFHGFSCFCLLCLYNL 161 (496)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~--~~-~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 161 (496)
.. . .....+. .....+.+++++ .+||+|++-. .. +.+..+|+.+|||++.+.....
T Consensus 68 ~~----~--~~~~~~~----~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~--------- 126 (376)
T 1v4v_A 68 ER----Q--ALPDLAA----RILPQAARALKE--MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLR--------- 126 (376)
T ss_dssp SC----C--CHHHHHH----HHHHHHHHHHHH--TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCC---------
T ss_pred CC----c--cHHHHHH----HHHHHHHHHHHH--cCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCc---------
Confidence 00 0 1111111 123456677887 7999999832 12 2346688899999875321100
Q ss_pred cccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHHh-hcC-C
Q 010988 162 HTSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAADMKSYGIIINTFEELESEYVKEYKK-TKG-G 239 (496)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~-~~~-~ 239 (496)
. +. .... + ......++.. ..++.++..+-.. .+.+.. ..+ .
T Consensus 127 ------------~---~~--~~~~-------~------~~~~~~~~~~--~~~~~~~~~s~~~-----~~~l~~~g~~~~ 169 (376)
T 1v4v_A 127 ------------S---GN--LKEP-------F------PEEANRRLTD--VLTDLDFAPTPLA-----KANLLKEGKREE 169 (376)
T ss_dssp ------------C---SC--TTSS-------T------THHHHHHHHH--HHCSEEEESSHHH-----HHHHHTTTCCGG
T ss_pred ------------c---cc--ccCC-------C------chHHHHHHHH--HHhceeeCCCHHH-----HHHHHHcCCCcc
Confidence 0 00 0000 0 0111121111 1234555554222 112222 122 3
Q ss_pred ceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhC-----CCCeE
Q 010988 240 KVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEAS-----KKPFI 314 (496)
Q Consensus 240 ~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~-----~~~~i 314 (496)
++..||........... . ..++.+.+ +++++|+++.|...... .+..+++|++.. +.+++
T Consensus 170 ki~vi~n~~~d~~~~~~--~--------~~~~~~~~---~~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv 234 (376)
T 1v4v_A 170 GILVTGQTGVDAVLLAA--K--------LGRLPEGL---PEGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFV 234 (376)
T ss_dssp GEEECCCHHHHHHHHHH--H--------HCCCCTTC---CSSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEE
T ss_pred eEEEECCchHHHHhhhh--h--------hhHHHHhc---CCCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEE
Confidence 57778743211000000 0 01111122 23457778777553211 355566666542 44544
Q ss_pred EEEeCCCCCchhhhhhhhhHHHHHHh-CCCcEEEeCcch---hhhhhccccccccccCCChhhHHHHHHhCCcEeccCCc
Q 010988 315 WVIRGGNNTSKEIQEWLLEEKFEERV-KGRGILILGWAP---QVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLF 390 (496)
Q Consensus 315 ~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~p---q~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~ 390 (496)
+..+.+. . +-+.+.... ..++|.+.++++ ...++..+++ ||+.+| |.+.||+++|+|+|+.+..
T Consensus 235 ~~~g~~~----~-----~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~ 302 (376)
T 1v4v_A 235 YPVHLNP----V-----VREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNV 302 (376)
T ss_dssp EECCSCH----H-----HHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSS
T ss_pred EECCCCH----H-----HHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCC
Confidence 4433221 0 112222222 235899885554 4578888888 999883 4455999999999998866
Q ss_pred cccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCC
Q 010988 391 GDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGS 470 (496)
Q Consensus 391 ~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~ 470 (496)
.++.. ++ +.|.|+.++ .++++|.++|.++|+|++.++.+.++ . +....+ .
T Consensus 303 ~~~~~----~~-~~g~g~lv~----------------~d~~~la~~i~~ll~d~~~~~~~~~~-------~-~~~~~~-~ 352 (376)
T 1v4v_A 303 TERPE----GL-KAGILKLAG----------------TDPEGVYRVVKGLLENPEELSRMRKA-------K-NPYGDG-K 352 (376)
T ss_dssp CSCHH----HH-HHTSEEECC----------------SCHHHHHHHHHHHHTCHHHHHHHHHS-------C-CSSCCS-C
T ss_pred Ccchh----hh-cCCceEECC----------------CCHHHHHHHHHHHHhChHhhhhhccc-------C-CCCCCC-h
Confidence 66555 33 567786652 37889999999999986333333221 1 112233 3
Q ss_pred hHHHHHHHHHHHhc
Q 010988 471 SSLMIKLLIQDIMH 484 (496)
Q Consensus 471 ~~~~~~~~~~~~~~ 484 (496)
+...+.+++.++.+
T Consensus 353 ~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 353 AGLMVARGVAWRLG 366 (376)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhc
Confidence 45555666666654
No 27
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.44 E-value=2.5e-10 Score=115.57 Aligned_cols=380 Identities=14% Similarity=0.095 Sum_probs=195.6
Q ss_pred CCCCEEEEEcC---C--------CccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCc
Q 010988 7 SQQPHFVLFPF---L--------AQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPY 75 (496)
Q Consensus 7 ~~~~~il~~~~---~--------~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~ 75 (496)
.+||||++++. | ..|+-..+..|++.|.++||+|++++......... ......++.++.++...
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~-----~~~~~~~v~v~~~~~~~ 92 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE-----IVRVAENLRVINIAAGP 92 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCS-----EEEEETTEEEEEECCSC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcc-----cccccCCeEEEEecCCC
Confidence 57899999995 2 36888889999999999999999998764321100 00011357776665221
Q ss_pred cccCCCCCCCcccCCCchhhHHHHHHHHHhhhHHHHHH-HHhcCCCCeEEEEcCCCc--chHHHHHhcCCCeEEEecchH
Q 010988 76 QEAGIPEGSENFDMLHSTDLLFNFFKSLTLLQLPLENL-LKELAPKPSCIVSDMCYP--WTVDTAARFNIPRISFHGFSC 152 (496)
Q Consensus 76 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-l~~~~~~pDlVI~D~~~~--~a~~~A~~lgiP~v~~~~~~~ 152 (496)
.. .... ......+.. +...+.++ ++.. .+||+|++..... .+..+++.+++|++.......
T Consensus 93 ~~-----~~~~---~~~~~~~~~-------~~~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~ 156 (438)
T 3c48_A 93 YE-----GLSK---EELPTQLAA-------FTGGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLA 156 (438)
T ss_dssp SS-----SCCG---GGGGGGHHH-------HHHHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred cc-----ccch---hHHHHHHHH-------HHHHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCc
Confidence 10 0000 000011111 11222233 4441 2599999874322 334467778999987543322
Q ss_pred HHHHHHhhhcccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhccccceEEEcChhhhhHHHHHH
Q 010988 153 FCLLCLYNLHTSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAADMKSYGIIINTFEELESEYVKE 232 (496)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~ 232 (496)
... ...+... ... ......... ......++.++..+-...+ .
T Consensus 157 ~~~-----------------------~~~~~~~------~~~--~~~~~~~~~--~~~~~~~d~ii~~s~~~~~-----~ 198 (438)
T 3c48_A 157 AVK-----------------------NSYRDDS------DTP--ESEARRICE--QQLVDNADVLAVNTQEEMQ-----D 198 (438)
T ss_dssp HHH-----------------------SCC----------CCH--HHHHHHHHH--HHHHHHCSEEEESSHHHHH-----H
T ss_pred ccc-----------------------ccccccc------CCc--chHHHHHHH--HHHHhcCCEEEEcCHHHHH-----H
Confidence 110 0000000 000 000001111 1234556777777744332 2
Q ss_pred HHhhc---CCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhC
Q 010988 233 YKKTK---GGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEAS 309 (496)
Q Consensus 233 ~~~~~---~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~ 309 (496)
+.+.+ ..++..|..-.....-... .. .....+.+-+.-. ++..+++..|+... ...+..+++|+...
T Consensus 199 ~~~~~g~~~~k~~vi~ngvd~~~~~~~-----~~--~~~~~~r~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l 268 (438)
T 3c48_A 199 LMHHYDADPDRISVVSPGADVELYSPG-----ND--RATERSRRELGIP-LHTKVVAFVGRLQP--FKGPQVLIKAVAAL 268 (438)
T ss_dssp HHHHHCCCGGGEEECCCCCCTTTSCCC-----------CHHHHHHTTCC-SSSEEEEEESCBSG--GGCHHHHHHHHHHH
T ss_pred HHHHhCCChhheEEecCCccccccCCc-----cc--chhhhhHHhcCCC-CCCcEEEEEeeecc--cCCHHHHHHHHHHH
Confidence 32222 1456666643221110000 00 0001122222211 22356677788653 22234444444432
Q ss_pred -----CCCe-EEEEeC----CCCCchhhhhhhhhHHHHHHh-CCCcEEEeCcchhh---hhhccccccccccC----CCh
Q 010988 310 -----KKPF-IWVIRG----GNNTSKEIQEWLLEEKFEERV-KGRGILILGWAPQV---LILSHPSIGGFLTH----CGW 371 (496)
Q Consensus 310 -----~~~~-i~~~~~----~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~---~~l~~~~~~~~I~H----GG~ 371 (496)
+.++ ++.++. +. ..+. +. .+.... ..++|.+.+|+|+. .++..+++ +|.- |.-
T Consensus 269 ~~~~p~~~~~l~i~G~~~~~g~-~~~~-----l~-~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~ 339 (438)
T 3c48_A 269 FDRDPDRNLRVIICGGPSGPNA-TPDT-----YR-HMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFG 339 (438)
T ss_dssp HHHCTTCSEEEEEECCBC-------CH-----HH-HHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSC
T ss_pred HhhCCCcceEEEEEeCCCCCCc-HHHH-----HH-HHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCc
Confidence 2233 333443 22 1111 21 111222 25789999999764 57778887 6643 334
Q ss_pred hhHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHH
Q 010988 372 NSSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRR 451 (496)
Q Consensus 372 gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~ 451 (496)
+++.||+++|+|+|+.+. ......+ +.-+.|..++. -+.+++.++|.++++|++.++.+.
T Consensus 340 ~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~---------------~d~~~la~~i~~l~~~~~~~~~~~ 399 (438)
T 3c48_A 340 LVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVDG---------------HSPHAWADALATLLDDDETRIRMG 399 (438)
T ss_dssp HHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEESS---------------CCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred hHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECCC---------------CCHHHHHHHHHHHHcCHHHHHHHH
Confidence 589999999999999654 3455555 45567877754 378999999999999887777777
Q ss_pred HHHHHHHHHHHHHhhhCCChHHHHHHHHHHHhcCCCCC
Q 010988 452 KRAREFQMMAKRATEETGSSSLMIKLLIQDIMHQPHSD 489 (496)
Q Consensus 452 ~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~ 489 (496)
+++++....+.-. .....+.++++.++..+..+
T Consensus 400 ~~~~~~~~~~s~~-----~~~~~~~~~~~~~~~~~~~~ 432 (438)
T 3c48_A 400 EDAVEHARTFSWA-----ATAAQLSSLYNDAIANENVD 432 (438)
T ss_dssp HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHhCCHH-----HHHHHHHHHHHHHhhhcccC
Confidence 7877776653211 23456677777776665544
No 28
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.40 E-value=1.4e-11 Score=122.49 Aligned_cols=364 Identities=12% Similarity=0.063 Sum_probs=182.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeCCcchhhHHHHHHhhhcCCCCeEE-EEeeCCccccCCCCCCCcc
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGA-AITIVTTPANAARFKTVVARAMQSGLPLQL-IEIQFPYQEAGIPEGSENF 87 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH-~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~i~~~~~~~~l~~~~~~~ 87 (496)
|||++++ +..++...+..|+++|.++|+ +|.++.+.............. ++.+ ..++. ... .
T Consensus 1 mkIl~v~-~~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-------~~~--~- 64 (384)
T 1vgv_A 1 MKVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLF-----SIVPDYDLNI-------MQP--G- 64 (384)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHH-----TCCCSEECCC-------CST--T-
T ss_pred CeEEEEe-cccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHc-----CCCCCcceec-------CCC--C-
Confidence 6899886 446778888999999999995 887665543222112221111 2322 22221 100 0
Q ss_pred cCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCC---CcchHHHHHhcCCCeEEEecchHHHHHHHhhhccc
Q 010988 88 DMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMC---YPWTVDTAARFNIPRISFHGFSCFCLLCLYNLHTS 164 (496)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~---~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 164 (496)
. ...... ......+.+++++ .+||+|++-.. .+.+..+++.+|+|++.......
T Consensus 65 ---~--~~~~~~----~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~------------ 121 (384)
T 1vgv_A 65 ---Q--GLTEIT----CRILEGLKPILAE--FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR------------ 121 (384)
T ss_dssp ---S--CHHHHH----HHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC------------
T ss_pred ---c--cHHHHH----HHHHHHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc------------
Confidence 0 111111 1123456677777 69999998432 22445677889999886321100
Q ss_pred ccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHHh-hcC-CceE
Q 010988 165 KVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAADMKSYGIIINTFEELESEYVKEYKK-TKG-GKVW 242 (496)
Q Consensus 165 ~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~-~~~-~~v~ 242 (496)
. +. .... ++ ......+ ....++.++..+-...+ .+.. ..+ .++.
T Consensus 122 ---------~---~~--~~~~-------~~------~~~~~~~--~~~~~d~ii~~s~~~~~-----~l~~~g~~~~~i~ 167 (384)
T 1vgv_A 122 ---------T---GD--LYSP-------WP------EEANRTL--TGHLAMYHFSPTETSRQ-----NLLRENVADSRIF 167 (384)
T ss_dssp ---------C---SC--TTSS-------TT------HHHHHHH--HHTTCSEEEESSHHHHH-----HHHHTTCCGGGEE
T ss_pred ---------c---cc--ccCC-------Cc------hHhhHHH--HHhhccEEEcCcHHHHH-----HHHHcCCChhhEE
Confidence 0 00 0000 00 1111111 11235666666533221 2221 222 3577
Q ss_pred EeCcCcCCCcCCchhhhhCCCCcCChhhhccccC-CCCCCeEEEEeeCCccCCChhhHHHHHHHHHh-----CCCCeEEE
Q 010988 243 CLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLD-SWPPNSVVYVCLGSICNLTSSQMIELGLGLEA-----SKKPFIWV 316 (496)
Q Consensus 243 ~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~-----~~~~~i~~ 316 (496)
.+|........... ...........++.+.+. -.+++++|+++.|...... ..+..+++|+.. .+.++++.
T Consensus 168 vi~n~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~ 244 (384)
T 1vgv_A 168 ITGNTVIDALLWVR--DQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYP 244 (384)
T ss_dssp ECCCHHHHHHHHHH--HHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred EeCChHHHHHHhhh--hccccchhhhHHHHHhccccCCCCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEE
Confidence 77742111000000 000000000012233322 1124567888888765322 234555566544 24555553
Q ss_pred EeCCCCCchhhhhhhhhHHHHHHhC-CCcEEEeCcch---hhhhhccccccccccCCChhhHHHHHHhCCcEeccCCccc
Q 010988 317 IRGGNNTSKEIQEWLLEEKFEERVK-GRGILILGWAP---QVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLFGD 392 (496)
Q Consensus 317 ~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~p---q~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~D 392 (496)
.+.+. . +-+.+..... .++|.+.++++ ...++..+++ +|+.+|. .+.||+++|+|+|+.+...+
T Consensus 245 ~g~~~----~-----~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~ 312 (384)
T 1vgv_A 245 VHLNP----N-----VREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTE 312 (384)
T ss_dssp CCBCH----H-----HHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCS
T ss_pred cCCCH----H-----HHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCC
Confidence 33221 0 1112222222 36899866665 4567888888 9998853 48899999999999987443
Q ss_pred cchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCChH
Q 010988 393 QFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSSS 472 (496)
Q Consensus 393 Q~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~ 472 (496)
. ..++ +.|.|+.+ . .+.++|.++|.++++|++.++.|.++++ +. .++ -+.
T Consensus 313 ~----~e~v-~~g~g~lv--~--------------~d~~~la~~i~~ll~d~~~~~~~~~~~~-------~~-~~~-~~~ 362 (384)
T 1vgv_A 313 R----PEAV-TAGTVRLV--G--------------TDKQRIVEEVTRLLKDENEYQAMSRAHN-------PY-GDG-QAC 362 (384)
T ss_dssp C----HHHH-HHTSEEEE--C--------------SSHHHHHHHHHHHHHCHHHHHHHHSSCC-------TT-CCS-CHH
T ss_pred c----chhh-hCCceEEe--C--------------CCHHHHHHHHHHHHhChHHHhhhhhccC-------CC-cCC-CHH
Confidence 3 3343 56778766 2 2678999999999998743343433332 22 233 445
Q ss_pred HHHHHHHHHHhcCCCCCCc
Q 010988 473 LMIKLLIQDIMHQPHSDHQ 491 (496)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~ 491 (496)
..+.+.+.++.+..-+.|.
T Consensus 363 ~~i~~~~~~~~~~~~~~~~ 381 (384)
T 1vgv_A 363 SRILEALKNNRISLGSHHH 381 (384)
T ss_dssp HHHHHHHHHTCCCC-----
T ss_pred HHHHHHHHHHHHhhccccc
Confidence 6666666677666544443
No 29
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.35 E-value=8.4e-11 Score=117.70 Aligned_cols=347 Identities=11% Similarity=0.086 Sum_probs=180.5
Q ss_pred CCCCEEEEEcCC---C-ccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCC
Q 010988 7 SQQPHFVLFPFL---A-QGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPE 82 (496)
Q Consensus 7 ~~~~~il~~~~~---~-~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~ 82 (496)
.+||||++++.. . .|.-.-+..+++.|.++||+|++++........... .... + .++.++.. .
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~----~~~~-~-~~~~~~~~-------~ 84 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDY----VVSG-G-KAVPIPYN-------G 84 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTT----EEEC-C-CCC-------------
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcc----cccC-C-cEEecccc-------C
Confidence 368999999842 2 566678999999999999999999987432200000 0000 0 11111100 0
Q ss_pred CCCcccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCc--chHHHHHhcCCCeEEEecchHHHHHHHhh
Q 010988 83 GSENFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYP--WTVDTAARFNIPRISFHGFSCFCLLCLYN 160 (496)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~--~a~~~A~~lgiP~v~~~~~~~~~~~~~~~ 160 (496)
. ... ..........+.++++. .+||+|++..... .+..+++..++|++..........
T Consensus 85 ~------------~~~-~~~~~~~~~~l~~~l~~--~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~----- 144 (406)
T 2gek_A 85 S------------VAR-LRFGPATHRKVKKWIAE--GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKS----- 144 (406)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSH-----
T ss_pred C------------ccc-ccccHHHHHHHHHHHHh--cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhh-----
Confidence 0 000 00000123456677777 6999999875443 345567778999998432210000
Q ss_pred hcccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHHhhcC-C
Q 010988 161 LHTSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAADMKSYGIIINTFEELESEYVKEYKKTKG-G 239 (496)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~-~ 239 (496)
.. . ..+...+......++.++..+-... +.+.+.++ .
T Consensus 145 ----------------~~--------------~-------~~~~~~~~~~~~~~d~ii~~s~~~~-----~~~~~~~~~~ 182 (406)
T 2gek_A 145 ----------------LT--------------L-------SVFQGILRPYHEKIIGRIAVSDLAR-----RWQMEALGSD 182 (406)
T ss_dssp ----------------HH--------------H-------HHHHSTTHHHHTTCSEEEESSHHHH-----HHHHHHHSSC
T ss_pred ----------------hh--------------H-------HHHHHHHHHHHhhCCEEEECCHHHH-----HHHHHhcCCC
Confidence 00 0 0000001123456677777773332 22333333 3
Q ss_pred ceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCc-cCCChhhHHHHHHHHHhC-----CCCe
Q 010988 240 KVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSI-CNLTSSQMIELGLGLEAS-----KKPF 313 (496)
Q Consensus 240 ~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~-~~~~~~~~~~~~~a~~~~-----~~~~ 313 (496)
++ .|..-... . ... . ... ..-+. ++..+++..|+. .. ...+..+++|+..+ +.++
T Consensus 183 ~~-vi~~~v~~-~----~~~-~------~~~-~~~~~---~~~~~i~~~G~~~~~--~Kg~~~li~a~~~l~~~~~~~~l 243 (406)
T 2gek_A 183 AV-EIPNGVDV-A----SFA-D------APL-LDGYP---REGRTVLFLGRYDEP--RKGMAVLLAALPKLVARFPDVEI 243 (406)
T ss_dssp EE-ECCCCBCH-H----HHH-T------CCC-CTTCS---CSSCEEEEESCTTSG--GGCHHHHHHHHHHHHTTSTTCEE
T ss_pred cE-EecCCCCh-h----hcC-C------Cch-hhhcc---CCCeEEEEEeeeCcc--ccCHHHHHHHHHHHHHHCCCeEE
Confidence 44 55432111 0 000 0 000 00010 012466677776 33 22234444444432 4443
Q ss_pred EEEEeCCCCCchhhhhhhhhHHHHHHhC--CCcEEEeCcchhh---hhhcccccccccc----CCChh-hHHHHHHhCCc
Q 010988 314 IWVIRGGNNTSKEIQEWLLEEKFEERVK--GRGILILGWAPQV---LILSHPSIGGFLT----HCGWN-SSLEAISAGVP 383 (496)
Q Consensus 314 i~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv~v~~~~pq~---~~l~~~~~~~~I~----HGG~g-s~~eal~~GvP 383 (496)
..+|.+. . + .+..... .++|.+.+++|+. .++..+++ +|. +.|.+ ++.||+++|+|
T Consensus 244 -~i~G~~~-~-~---------~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~P 309 (406)
T 2gek_A 244 -LIVGRGD-E-D---------ELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTA 309 (406)
T ss_dssp -EEESCSC-H-H---------HHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCE
T ss_pred -EEEcCCc-H-H---------HHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCC
Confidence 3344444 1 1 2222111 5789999999874 68888888 653 44444 89999999999
Q ss_pred EeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHH
Q 010988 384 MITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKR 463 (496)
Q Consensus 384 ~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~ 463 (496)
+|+.+. ......+ +.-+.|...+. -+.+++.++|.++++|++..+.+.+++++....+.
T Consensus 310 vI~~~~----~~~~e~i-~~~~~g~~~~~---------------~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s- 368 (406)
T 2gek_A 310 VVASDL----DAFRRVL-ADGDAGRLVPV---------------DDADGMAAALIGILEDDQLRAGYVARASERVHRYD- 368 (406)
T ss_dssp EEECCC----HHHHHHH-TTTTSSEECCT---------------TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGB-
T ss_pred EEEecC----CcHHHHh-cCCCceEEeCC---------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCC-
Confidence 999765 4455556 45667877754 37889999999999987655556666555543211
Q ss_pred HhhhCCChHHHHHHHHHHHhcCC
Q 010988 464 ATEETGSSSLMIKLLIQDIMHQP 486 (496)
Q Consensus 464 a~~~~g~~~~~~~~~~~~~~~~~ 486 (496)
. ......+.++++++++.+
T Consensus 369 ~----~~~~~~~~~~~~~~~~~~ 387 (406)
T 2gek_A 369 W----SVVSAQIMRVYETVSGAG 387 (406)
T ss_dssp H----HHHHHHHHHHHHHHCCTT
T ss_pred H----HHHHHHHHHHHHHHHhhc
Confidence 0 112345556666665544
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.28 E-value=5.9e-10 Score=111.37 Aligned_cols=330 Identities=11% Similarity=0.075 Sum_probs=168.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcchhhHHHHHHhhhcCCCCeEE-EEeeCCccccCCCCCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQN-GAAITIVTTPANAARFKTVVARAMQSGLPLQL-IEIQFPYQEAGIPEGS 84 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~i~~~~~~~~l~~~~ 84 (496)
|.||||++++ ++.....=+..|.++|.++ |+++.++.+....+........ .+++. +.+. +....
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~-----~~i~~~~~l~-------~~~~~ 89 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLEL-----FSITPDFDLN-------IMEPG 89 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHH-----TTCCCSEECC-------CCCTT
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh-----cCCCCceeee-------cCCCC
Confidence 5678888887 6666677778899999987 8998766665432211111111 12210 0111 10000
Q ss_pred CcccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEc--CCC-cchHHHHHhcCCCeEEEecchHHHHHHHhhh
Q 010988 85 ENFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSD--MCY-PWTVDTAARFNIPRISFHGFSCFCLLCLYNL 161 (496)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D--~~~-~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 161 (496)
. .... ........+.+++++ .+||+|++- ..+ +++..+|+.+|||++.+....
T Consensus 90 ~--------~~~~----~~~~~~~~l~~~l~~--~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~---------- 145 (396)
T 3dzc_A 90 Q--------TLNG----VTSKILLGMQQVLSS--EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL---------- 145 (396)
T ss_dssp C--------CHHH----HHHHHHHHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC----------
T ss_pred C--------CHHH----HHHHHHHHHHHHHHh--cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc----------
Confidence 0 1111 123345567777777 799999863 223 345678899999987532100
Q ss_pred cccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHHh-hcC-C
Q 010988 162 HTSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAADMKSYGIIINTFEELESEYVKEYKK-TKG-G 239 (496)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~-~~~-~ 239 (496)
..+ .... .++ ....+.+.. ..++.++..+-.. .+.+.. ..+ .
T Consensus 146 --------------rs~--~~~~-------~~~------~~~~r~~~~--~~a~~~~~~se~~-----~~~l~~~G~~~~ 189 (396)
T 3dzc_A 146 --------------RTG--NIYS-------PWP------EEGNRKLTA--ALTQYHFAPTDTS-----RANLLQENYNAE 189 (396)
T ss_dssp --------------CCS--CTTS-------STT------HHHHHHHHH--HTCSEEEESSHHH-----HHHHHHTTCCGG
T ss_pred --------------ccc--cccc-------CCc------HHHHHHHHH--HhcCEEECCCHHH-----HHHHHHcCCCcC
Confidence 000 0000 000 112222111 2345566655222 222222 222 4
Q ss_pred ceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCC-CCCCeEEEEeeCCccCCChhhHHHHHHHHHh-----CCCCe
Q 010988 240 KVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDS-WPPNSVVYVCLGSICNLTSSQMIELGLGLEA-----SKKPF 313 (496)
Q Consensus 240 ~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~-----~~~~~ 313 (496)
++..+|............ ..........++.+.+.- .+++++|+++.+-...... .+..+++|++. .+.++
T Consensus 190 ki~vvGn~~~d~~~~~~~--~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~ 266 (396)
T 3dzc_A 190 NIFVTGNTVIDALLAVRE--KIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQI 266 (396)
T ss_dssp GEEECCCHHHHHHHHHHH--HHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEE
T ss_pred cEEEECCcHHHHHHHhhh--hcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceE
Confidence 688898422211000000 000000000223333321 1345677776532222222 25567777654 35566
Q ss_pred EEEEeCCCCCchhhhhhhhhHHHHHHh-CCCcEEEeCcch---hhhhhccccccccccCCChhhHHHHHHhCCcEeccCC
Q 010988 314 IWVIRGGNNTSKEIQEWLLEEKFEERV-KGRGILILGWAP---QVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPL 389 (496)
Q Consensus 314 i~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~p---q~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~ 389 (496)
|+..+.+. . +-+.+.... ..++|.+.++++ ...++..+++ +|+-.| |.+.||.++|+|+|+..-
T Consensus 267 v~~~g~~~----~-----~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~ 334 (396)
T 3dzc_A 267 LYPVHLNP----N-----VREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRE 334 (396)
T ss_dssp EEECCBCH----H-----HHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCS
T ss_pred EEEeCCCh----H-----HHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccC
Confidence 65543321 1 111222221 246899877774 4567888887 999987 555799999999999755
Q ss_pred ccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCCh
Q 010988 390 FGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGG 445 (496)
Q Consensus 390 ~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~ 445 (496)
..+++ .++ +.|.++.+ . .++++|.++|.++|+|+.
T Consensus 335 ~~~~~----e~v-~~G~~~lv--~--------------~d~~~l~~ai~~ll~d~~ 369 (396)
T 3dzc_A 335 TTERP----EAV-AAGTVKLV--G--------------TNQQQICDALSLLLTDPQ 369 (396)
T ss_dssp SCSCH----HHH-HHTSEEEC--T--------------TCHHHHHHHHHHHHHCHH
T ss_pred CCcch----HHH-HcCceEEc--C--------------CCHHHHHHHHHHHHcCHH
Confidence 55543 243 56877443 2 368999999999999873
No 31
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.27 E-value=5.6e-10 Score=111.68 Aligned_cols=351 Identities=12% Similarity=0.045 Sum_probs=177.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHhhhcCCCCeEE-EEeeCCccccCCCCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTPANAARFKTVVARAMQSGLPLQL-IEIQFPYQEAGIPEG 83 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~i~~~~~~~~l~~~ 83 (496)
|+||||++++ ++...+.=+..|.++|.++ |+++.++.+....+........ .+++. +.+ .+...
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~-----~~i~~~~~l-------~v~~~ 91 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEI-----FDIKPDIDL-------DIMKK 91 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHH-----TTCCCSEEC-------CCCC-
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHh-----cCCCCCccc-------ccCCC
Confidence 6678998888 5655566668899999988 6888777665321111111111 12210 111 11111
Q ss_pred CCcccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcC---CCcchHHHHHhcCCCeEEEecchHHHHHHHhh
Q 010988 84 SENFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDM---CYPWTVDTAARFNIPRISFHGFSCFCLLCLYN 160 (496)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~---~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~ 160 (496)
.. ... .........+.+++++ .+||+|++-. ..+++..+|+.+|||++.+....
T Consensus 92 ~~--------~~~----~~~~~~~~~l~~~l~~--~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl--------- 148 (403)
T 3ot5_A 92 GQ--------TLA----EITSRVMNGINEVIAA--ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL--------- 148 (403)
T ss_dssp CC--------CHH----HHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC---------
T ss_pred CC--------CHH----HHHHHHHHHHHHHHHH--cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc---------
Confidence 00 111 1122345567777777 7999998632 22345778999999987532100
Q ss_pred hcccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHHh-hc-C
Q 010988 161 LHTSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAADMKSYGIIINTFEELESEYVKEYKK-TK-G 238 (496)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~-~~-~ 238 (496)
..+ .... .++ ....+.+.. ..++.++..+-. ..+.+.. .. +
T Consensus 149 ---------------rs~--~~~~-------~~p------~~~~r~~~~--~~a~~~~~~se~-----~~~~l~~~Gi~~ 191 (403)
T 3ot5_A 149 ---------------RTW--NKYS-------PFP------EEMNRQLTG--VMADIHFSPTKQ-----AKENLLAEGKDP 191 (403)
T ss_dssp ---------------CCS--CTTS-------STT------HHHHHHHHH--HHCSEEEESSHH-----HHHHHHHTTCCG
T ss_pred ---------------ccc--cccc-------CCc------HHHHHHHHH--HhcCEEECCCHH-----HHHHHHHcCCCc
Confidence 000 0000 000 112222111 113445555522 2222222 22 2
Q ss_pred CceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHh-----CCCCe
Q 010988 239 GKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEA-----SKKPF 313 (496)
Q Consensus 239 ~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~-----~~~~~ 313 (496)
.++..+|......... . .... ...+..+.+ +++++++++.|....... .+..+++|+.. .+.++
T Consensus 192 ~~i~vvGn~~~D~~~~----~-~~~~--~~~~~~~~l---~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~ 260 (403)
T 3ot5_A 192 ATIFVTGNTAIDALKT----T-VQKD--YHHPILENL---GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTEL 260 (403)
T ss_dssp GGEEECCCHHHHHHHH----H-SCTT--CCCHHHHSC---TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEE
T ss_pred ccEEEeCCchHHHHHh----h-hhhh--cchHHHHhc---cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceE
Confidence 4688998432211000 0 0000 011222222 345678787664322111 24556666543 35566
Q ss_pred EEEEeCCCCCchhhhhhhhhHHHHHHh-CCCcEEEeCcch---hhhhhccccccccccCCChhhH-HHHHHhCCcEeccC
Q 010988 314 IWVIRGGNNTSKEIQEWLLEEKFEERV-KGRGILILGWAP---QVLILSHPSIGGFLTHCGWNSS-LEAISAGVPMITWP 388 (496)
Q Consensus 314 i~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~p---q~~~l~~~~~~~~I~HGG~gs~-~eal~~GvP~v~~P 388 (496)
|+..+.+. ... +.+.... ..++|.+.++++ ...++..+++ +|+-.| ++ .||.++|+|+|++|
T Consensus 261 v~~~~~~~----~~~-----~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SG--g~~~EA~a~g~PvV~~~ 327 (403)
T 3ot5_A 261 VYPMHLNP----AVR-----EKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSG--GVQEEAPGMGVPVLVLR 327 (403)
T ss_dssp EEECCSCH----HHH-----HHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCH--HHHHHGGGTTCCEEECC
T ss_pred EEecCCCH----HHH-----HHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc--cHHHHHHHhCCCEEEec
Confidence 65543321 111 1122211 246899999886 4467778887 998874 44 59999999999997
Q ss_pred CccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhC
Q 010988 389 LFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEET 468 (496)
Q Consensus 389 ~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~ 468 (496)
...+++. ++ +.|.|+.+ . .++++|.++|.++|+|+..++.|+ ..... ...|
T Consensus 328 ~~~~~~e----~v-~~g~~~lv--~--------------~d~~~l~~ai~~ll~~~~~~~~m~-------~~~~~-~g~~ 378 (403)
T 3ot5_A 328 DTTERPE----GI-EAGTLKLI--G--------------TNKENLIKEALDLLDNKESHDKMA-------QAANP-YGDG 378 (403)
T ss_dssp SSCSCHH----HH-HHTSEEEC--C--------------SCHHHHHHHHHHHHHCHHHHHHHH-------HSCCT-TCCS
T ss_pred CCCcchh----he-eCCcEEEc--C--------------CCHHHHHHHHHHHHcCHHHHHHHH-------hhcCc-ccCC
Confidence 6666554 33 56877655 2 378899999999999873333222 22221 2344
Q ss_pred CChHHHHHHHHHHHhc
Q 010988 469 GSSSLMIKLLIQDIMH 484 (496)
Q Consensus 469 g~~~~~~~~~~~~~~~ 484 (496)
++ ...+.+.|.++.+
T Consensus 379 ~a-a~rI~~~l~~~l~ 393 (403)
T 3ot5_A 379 FA-ANRILAAIKSHFE 393 (403)
T ss_dssp CH-HHHHHHHHHHHHT
T ss_pred cH-HHHHHHHHHHHhC
Confidence 44 4555555555554
No 32
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.26 E-value=5.1e-09 Score=105.66 Aligned_cols=147 Identities=16% Similarity=0.227 Sum_probs=90.2
Q ss_pred EEEEeeCCcc-C-CChhhHHHHHHHHHh----CCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhh-
Q 010988 283 VVYVCLGSIC-N-LTSSQMIELGLGLEA----SKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVL- 355 (496)
Q Consensus 283 vI~vs~GS~~-~-~~~~~~~~~~~a~~~----~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~- 355 (496)
.+++..|+.. . ...+.+...+..+.. .+.+++ .+|.+. . ...+. + ..+.... +.++.+.+|+|+.+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~-i~G~g~--~-~~~~~-l-~~~~~~~-~~~~~~~g~~~~~~~ 324 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFI-IIGKGD--P-ELEGW-A-RSLEEKH-GNVKVITEMLSREFV 324 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEE-EECCCC--H-HHHHH-H-HHHHHHC-TTEEEECSCCCHHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEE-EEcCCC--h-hHHHH-H-HHHHhhc-CCEEEEcCCCCHHHH
Confidence 6778888876 3 233333333333333 233433 334332 1 10010 1 1222222 36667788898754
Q ss_pred --hhcccccccccc----CCChhhHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccC
Q 010988 356 --ILSHPSIGGFLT----HCGWNSSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVK 429 (496)
Q Consensus 356 --~l~~~~~~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~ 429 (496)
++..+++ +|. -|--+++.||+++|+|+|+... ......+ .-|.|..++.. +
T Consensus 325 ~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~--~~~~g~~~~~~---------------d 381 (439)
T 3fro_A 325 RELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII--TNETGILVKAG---------------D 381 (439)
T ss_dssp HHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC--CTTTCEEECTT---------------C
T ss_pred HHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE--EcCceEEeCCC---------------C
Confidence 6777777 662 2334689999999999998643 3444444 34688877653 7
Q ss_pred HHHHHHHHHHHhc-CChhHHHHHHHHHHHHH
Q 010988 430 KEDVVKAINMLMN-EGGERENRRKRAREFQM 459 (496)
Q Consensus 430 ~~~l~~~i~~lL~-~~~~~~~~~~~a~~l~~ 459 (496)
.+++.++|.++++ |++..+.+.+++++..+
T Consensus 382 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 412 (439)
T 3fro_A 382 PGELANAILKALELSRSDLSKFRENCKKRAM 412 (439)
T ss_dssp HHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Confidence 8999999999999 88777777777776653
No 33
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.25 E-value=1.5e-09 Score=107.24 Aligned_cols=165 Identities=15% Similarity=0.139 Sum_probs=106.0
Q ss_pred eEEEEeeCCccCCChhhHHHHHHHHHhCCC----Ce-EEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchh-hh
Q 010988 282 SVVYVCLGSICNLTSSQMIELGLGLEASKK----PF-IWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQ-VL 355 (496)
Q Consensus 282 ~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~----~~-i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq-~~ 355 (496)
..+++..|+... ...+..+++|++.... ++ ++.+|.+. .+...+ -....-..++|.+.++..+ ..
T Consensus 196 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~--~~~~~~-----~~~~~~~~~~v~~~g~~~~~~~ 266 (374)
T 2iw1_A 196 QNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK--PRKFEA-----LAEKLGVRSNVHFFSGRNDVSE 266 (374)
T ss_dssp CEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC--CHHHHH-----HHHHHTCGGGEEEESCCSCHHH
T ss_pred CeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC--HHHHHH-----HHHHcCCCCcEEECCCcccHHH
Confidence 366677787643 3345667777776532 22 34444443 122222 1111112568999888653 55
Q ss_pred hhcccccccccc----CCChhhHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHH
Q 010988 356 ILSHPSIGGFLT----HCGWNSSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKE 431 (496)
Q Consensus 356 ~l~~~~~~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~ 431 (496)
++..+++ +|. -|.-+++.||+++|+|+|+.+. ..+...+ ++.+.|..++.. -+.+
T Consensus 267 ~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~~--------------~~~~ 325 (374)
T 2iw1_A 267 LMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIAEP--------------FSQE 325 (374)
T ss_dssp HHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEECSS--------------CCHH
T ss_pred HHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeCCC--------------CCHH
Confidence 8888888 664 4667789999999999999765 3556677 577889888632 4889
Q ss_pred HHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHH
Q 010988 432 DVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSSSLMIKLLIQD 481 (496)
Q Consensus 432 ~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~ 481 (496)
++.++|.++++|++.++.+.+++++..... .--+....+.++++.
T Consensus 326 ~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 326 QLNEVLRKALTQSPLRMAWAENARHYADTQ-----DLYSLPEKAADIITG 370 (374)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHS-----CCSCHHHHHHHHHHC
T ss_pred HHHHHHHHHHcChHHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHH
Confidence 999999999998866666777776665542 113344555555543
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.17 E-value=1.7e-08 Score=100.65 Aligned_cols=333 Identities=13% Similarity=0.078 Sum_probs=174.1
Q ss_pred CCEEEEEcCCC-ccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCcc
Q 010988 9 QPHFVLFPFLA-QGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSENF 87 (496)
Q Consensus 9 ~~~il~~~~~~-~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~~ 87 (496)
++++....+|. .|.-.-...|+++|+++||+|++++....... . ....++.+..++..... ..
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~-------~~~~~i~~~~~~~~~~~--------~~ 78 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRL-N-------KVYPNIYFHEVTVNQYS--------VF 78 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC------------CCCTTEEEECCCCC------------C
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc-c-------ccCCceEEEeccccccc--------cc
Confidence 36777787876 56667788999999999999999987532110 0 01235666554422110 00
Q ss_pred cCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCc--chHHHHH-hc--CCCeEEEecchHHHHHHHhhhc
Q 010988 88 DMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYP--WTVDTAA-RF--NIPRISFHGFSCFCLLCLYNLH 162 (496)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~--~a~~~A~-~l--giP~v~~~~~~~~~~~~~~~~~ 162 (496)
.. . .+. . .....+.++++. .+||+|++..... .+..++. .+ ++|++......... .
T Consensus 79 ~~-~---~~~--~----~~~~~l~~~l~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~------~- 139 (394)
T 2jjm_A 79 QY-P---PYD--L----ALASKMAEVAQR--ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT------V- 139 (394)
T ss_dssp CS-C---CHH--H----HHHHHHHHHHHH--HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH------T-
T ss_pred cc-c---ccc--H----HHHHHHHHHHHH--cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc------c-
Confidence 00 0 000 0 122345566666 6999999874433 2233443 34 59988744332111 0
Q ss_pred ccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHHhhc--CCc
Q 010988 163 TSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAADMKSYGIIINTFEELESEYVKEYKKTK--GGK 240 (496)
Q Consensus 163 ~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~--~~~ 240 (496)
.+... ....... .....++.++..+-... +.+.+.+ +.+
T Consensus 140 -----------------~~~~~--------------~~~~~~~---~~~~~ad~ii~~s~~~~-----~~~~~~~~~~~~ 180 (394)
T 2jjm_A 140 -----------------LGSDP--------------SLNNLIR---FGIEQSDVVTAVSHSLI-----NETHELVKPNKD 180 (394)
T ss_dssp -----------------TTTCT--------------TTHHHHH---HHHHHSSEEEESCHHHH-----HHHHHHTCCSSC
T ss_pred -----------------cCCCH--------------HHHHHHH---HHHhhCCEEEECCHHHH-----HHHHHhhCCccc
Confidence 00000 0011111 12345677777664332 2333333 246
Q ss_pred eEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHh----CCCCeEEE
Q 010988 241 VWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEA----SKKPFIWV 316 (496)
Q Consensus 241 v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~----~~~~~i~~ 316 (496)
+..|..-.....-. . .....+.+-+.-. ++..+++..|.... ...+..+++|++. .+.++ +.
T Consensus 181 ~~vi~ngv~~~~~~-~---------~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l-~i 246 (394)
T 2jjm_A 181 IQTVYNFIDERVYF-K---------RDMTQLKKEYGIS-ESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKL-LL 246 (394)
T ss_dssp EEECCCCCCTTTCC-C---------CCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEE-EE
T ss_pred EEEecCCccHHhcC-C---------cchHHHHHHcCCC-CCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEE-EE
Confidence 77776432211100 0 0011222222211 22345566777653 2234445555544 24443 44
Q ss_pred EeCCCCCchhhhhhhhhHHHHHHhC-CCcEEEeCcchh-hhhhccccccccc----cCCChhhHHHHHHhCCcEeccCCc
Q 010988 317 IRGGNNTSKEIQEWLLEEKFEERVK-GRGILILGWAPQ-VLILSHPSIGGFL----THCGWNSSLEAISAGVPMITWPLF 390 (496)
Q Consensus 317 ~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq-~~~l~~~~~~~~I----~HGG~gs~~eal~~GvP~v~~P~~ 390 (496)
+|.+. ..+...+ ...... .++|.+.++..+ ..++..+++ +| .-|.-+++.||+++|+|+|+.+..
T Consensus 247 ~G~g~-~~~~l~~------~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~ 317 (394)
T 2jjm_A 247 VGDGP-EFCTILQ------LVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG 317 (394)
T ss_dssp ECCCT-THHHHHH------HHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT
T ss_pred ECCch-HHHHHHH------HHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC
Confidence 45443 2111111 111111 467888887543 568888888 77 556667899999999999997753
Q ss_pred cccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHH
Q 010988 391 GDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQ 458 (496)
Q Consensus 391 ~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~ 458 (496)
.....+ +.-+.|...+. -+.+++.++|.++++|++..+.+.+++++..
T Consensus 318 ----~~~e~v-~~~~~g~~~~~---------------~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 365 (394)
T 2jjm_A 318 ----GIPEVI-QHGDTGYLCEV---------------GDTTGVADQAIQLLKDEELHRNMGERARESV 365 (394)
T ss_dssp ----TSTTTC-CBTTTEEEECT---------------TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ----ChHHHh-hcCCceEEeCC---------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 223334 34456777754 3789999999999998765666666666654
No 35
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.15 E-value=2e-08 Score=103.53 Aligned_cols=151 Identities=12% Similarity=0.117 Sum_probs=92.8
Q ss_pred EEEEeeCCccCCChhhHHHHHHHHHhCCC----C-eEEEEeCCCCCc----h-----h---hhhhhhhHHHHHHhCCCcE
Q 010988 283 VVYVCLGSICNLTSSQMIELGLGLEASKK----P-FIWVIRGGNNTS----K-----E---IQEWLLEEKFEERVKGRGI 345 (496)
Q Consensus 283 vI~vs~GS~~~~~~~~~~~~~~a~~~~~~----~-~i~~~~~~~~~~----~-----~---~~~~~lp~~~~~~~~~~nv 345 (496)
.+++..|.... ..-+..+++|+..+.. . .++.+|... .. . + ..+ +-+.....-..++|
T Consensus 263 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~--l~~~~~~~~l~~~V 337 (499)
T 2r60_A 263 PAIIASSRLDQ--KKNHYGLVEAYVQNKELQDKANLVLTLRGIE-NPFEDYSRAGQEEKEILGK--IIELIDNNDCRGKV 337 (499)
T ss_dssp CEEEECSCCCG--GGCHHHHHHHHHTCHHHHHHCEEEEEESSCS-BTTTBCTTSCHHHHHHHHH--HHHHHHHTTCBTTE
T ss_pred cEEEEeecCcc--ccCHHHHHHHHHHHHHhCCCceEEEEECCCC-CcccccccccccchHHHHH--HHHHHHhcCCCceE
Confidence 45667777643 3346677788776532 2 344555421 10 0 0 111 21111111125689
Q ss_pred EEeCcchhh---hhhccc----ccccccc---CCC-hhhHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEecccC
Q 010988 346 LILGWAPQV---LILSHP----SIGGFLT---HCG-WNSSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEV 414 (496)
Q Consensus 346 ~v~~~~pq~---~~l~~~----~~~~~I~---HGG-~gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~ 414 (496)
.+.+++|+. .++..+ ++ +|. +-| -.++.||+++|+|+|+... ......+ +.-+.|..++..
T Consensus 338 ~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~~~~- 409 (499)
T 2r60_A 338 SMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLVDPE- 409 (499)
T ss_dssp EEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEECTT-
T ss_pred EECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEeCCC-
Confidence 999999754 467777 76 663 223 3588999999999998753 3445555 454578777553
Q ss_pred CCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Q 010988 415 PLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMM 460 (496)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~ 460 (496)
+.+++.++|.++++|++.++.+.+++++....
T Consensus 410 --------------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 410 --------------DPEDIARGLLKAFESEETWSAYQEKGKQRVEE 441 (499)
T ss_dssp --------------CHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred --------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 78899999999999876666666666655443
No 36
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.14 E-value=5.1e-09 Score=102.29 Aligned_cols=125 Identities=11% Similarity=0.133 Sum_probs=80.8
Q ss_pred EEEeeCCccCCChhhHHHHHHHHHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhh---hhhccc
Q 010988 284 VYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQV---LILSHP 360 (496)
Q Consensus 284 I~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~---~~l~~~ 360 (496)
+++..|+... ...+..+++|++.++.+++++ |.+. ..+... .+..... ++|.+.+|+|+. .++..+
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i~-G~g~-~~~~l~------~~~~~~~-~~v~~~g~~~~~~l~~~~~~a 232 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVLA-GPAW-EPEYFD------EITRRYG-STVEPIGEVGGERRLDLLASA 232 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEEE-SCCC-CHHHHH------HHHHHHT-TTEEECCCCCHHHHHHHHHHC
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEEE-eCcc-cHHHHH------HHHHHhC-CCEEEeccCCHHHHHHHHHhC
Confidence 4455677642 344667778887777776554 4443 222222 2222233 899999999975 688888
Q ss_pred cccccc--cC-----------CC-hhhHHHHHHhCCcEeccCCccccchhHHHHHHH--hhceEEecccCCCCCCccccc
Q 010988 361 SIGGFL--TH-----------CG-WNSSLEAISAGVPMITWPLFGDQFCNEKLIVQV--LNIGVRIGVEVPLDFGEEEEI 424 (496)
Q Consensus 361 ~~~~~I--~H-----------GG-~gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~--~G~g~~l~~~~~~~~~~~~~~ 424 (496)
++ +| +. -| -+++.||+++|+|+|+.... .+...+ +. -+.|... .
T Consensus 233 dv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~-~~~~~~~g~~~--~----------- 292 (342)
T 2iuy_A 233 HA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIV-PSVGEVVGYGT--D----------- 292 (342)
T ss_dssp SE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHG-GGGEEECCSSS--C-----------
T ss_pred CE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHh-cccCCCceEEc--C-----------
Confidence 88 65 32 33 35789999999999998753 344445 34 3344332 3
Q ss_pred ccccCHHHHHHHHHHHhc
Q 010988 425 GVLVKKEDVVKAINMLMN 442 (496)
Q Consensus 425 ~~~~~~~~l~~~i~~lL~ 442 (496)
. +.+++.++|.++++
T Consensus 293 --~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 293 --F-APDEARRTLAGLPA 307 (342)
T ss_dssp --C-CHHHHHHHHHTSCC
T ss_pred --C-CHHHHHHHHHHHHH
Confidence 4 88999999999986
No 37
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.13 E-value=3.9e-09 Score=104.67 Aligned_cols=322 Identities=15% Similarity=0.098 Sum_probs=172.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchh-hHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAA-RFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSE 85 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~ 85 (496)
..|+|++++. +++-.+.=+..|.++|.++ +++.++.+....+ .+.+... .+ +. |+.+... +..+..
T Consensus 7 ~~~~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~----~~--~~---i~~~~~~--l~~~~~ 73 (385)
T 4hwg_A 7 HHMLKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF----DD--MG---IRKPDYF--LEVAAD 73 (385)
T ss_dssp -CCCEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH----C---CC---CCCCSEE--CCCCCC
T ss_pred hhhhheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH----hh--CC---CCCCcee--cCCCCC
Confidence 4678888776 7787888888888888877 9988887764322 2222110 11 21 2211111 111100
Q ss_pred cccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEE--cCCCcchHHHHHhcCCCeEEEecchHHHHHHHhhhcc
Q 010988 86 NFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVS--DMCYPWTVDTAARFNIPRISFHGFSCFCLLCLYNLHT 163 (496)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~--D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 163 (496)
.. ..........+.+++++ .+||+||+ |..+.+++.+|..+|||++.+....
T Consensus 74 --------~~----~~~~~~~~~~l~~~l~~--~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl------------ 127 (385)
T 4hwg_A 74 --------NT----AKSIGLVIEKVDEVLEK--EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN------------ 127 (385)
T ss_dssp --------CS----HHHHHHHHHHHHHHHHH--HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC------------
T ss_pred --------CH----HHHHHHHHHHHHHHHHh--cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC------------
Confidence 11 12223345567777777 79999986 3334455889999999977532100
Q ss_pred cccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHH-hhcC-Cce
Q 010988 164 SKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAADMKSYGIIINTFEELESEYVKEYK-KTKG-GKV 241 (496)
Q Consensus 164 ~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~-~~~~-~~v 241 (496)
.+... . +| ....+.+.. .-++.++..+-.. .+.+. ...+ .++
T Consensus 128 -------rs~~~--~---~p-----------------ee~nR~~~~--~~a~~~~~~te~~-----~~~l~~~G~~~~~I 171 (385)
T 4hwg_A 128 -------RCFDQ--R---VP-----------------EEINRKIID--HISDVNITLTEHA-----RRYLIAEGLPAELT 171 (385)
T ss_dssp -------CCSCT--T---ST-----------------HHHHHHHHH--HHCSEEEESSHHH-----HHHHHHTTCCGGGE
T ss_pred -------ccccc--c---Cc-----------------HHHHHHHHH--hhhceeecCCHHH-----HHHHHHcCCCcCcE
Confidence 00000 0 00 112222211 1234455555222 12222 2232 478
Q ss_pred EEeCcCcCCCcCCc-hhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCC-hhhHHHHHHHHHhC----CCCeEE
Q 010988 242 WCLGPVSLCNKQDI-DKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLT-SSQMIELGLGLEAS----KKPFIW 315 (496)
Q Consensus 242 ~~VGpl~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~-~~~~~~~~~a~~~~----~~~~i~ 315 (496)
+.+|-......... ... ...++.+.+.-. +++.|+++.|...... .+.+..+++|+..+ +.++|+
T Consensus 172 ~vtGnp~~D~~~~~~~~~--------~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~ 242 (385)
T 4hwg_A 172 FKSGSHMPEVLDRFMPKI--------LKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIF 242 (385)
T ss_dssp EECCCSHHHHHHHHHHHH--------HHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred EEECCchHHHHHHhhhhc--------chhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 89994322111000 000 012222333322 2458999988764332 34566777777653 566676
Q ss_pred EEeCCCCCchhhhhhhhhHHHHHH---h-CCCcEEEeCcch---hhhhhccccccccccCCChhhHHHHHHhCCcEeccC
Q 010988 316 VIRGGNNTSKEIQEWLLEEKFEER---V-KGRGILILGWAP---QVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWP 388 (496)
Q Consensus 316 ~~~~~~~~~~~~~~~~lp~~~~~~---~-~~~nv~v~~~~p---q~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P 388 (496)
..... .. +.+.+. . ..+||.+.+.++ ...++..+++ +|+-.|. .+.||.+.|+|+|.++
T Consensus 243 p~~p~------~~-----~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~ 308 (385)
T 4hwg_A 243 STHPR------TK-----KRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIR 308 (385)
T ss_dssp EECHH------HH-----HHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECS
T ss_pred ECChH------HH-----HHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcC
Confidence 54321 11 111111 1 135888866554 4568888888 9998775 4689999999999998
Q ss_pred CccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhH
Q 010988 389 LFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGER 447 (496)
Q Consensus 389 ~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~ 447 (496)
...+.+. .+ +.|.++.+ . .++++|.+++.++|+|+...
T Consensus 309 ~~ter~e----~v-~~G~~~lv--~--------------~d~~~i~~ai~~ll~d~~~~ 346 (385)
T 4hwg_A 309 EAHERPE----GM-DAGTLIMS--G--------------FKAERVLQAVKTITEEHDNN 346 (385)
T ss_dssp SSCSCTH----HH-HHTCCEEC--C--------------SSHHHHHHHHHHHHTTCBTT
T ss_pred CCccchh----hh-hcCceEEc--C--------------CCHHHHHHHHHHHHhChHHH
Confidence 7554222 23 56877554 2 47889999999999987543
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.10 E-value=3.7e-08 Score=98.89 Aligned_cols=93 Identities=14% Similarity=0.055 Sum_probs=65.7
Q ss_pred CCcEEEeCcch------hhhhhccccccccccCC----ChhhHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEec
Q 010988 342 GRGILILGWAP------QVLILSHPSIGGFLTHC----GWNSSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIG 411 (496)
Q Consensus 342 ~~nv~v~~~~p------q~~~l~~~~~~~~I~HG----G~gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~ 411 (496)
.++|.+.+|++ ...++..+++ +|.-. .-+++.||+++|+|+|+.+. ..+...+ +.-+.|...+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEEC
Confidence 57999988876 2346777777 66533 45588999999999999764 2344445 3545676552
Q ss_pred ccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHH
Q 010988 412 VEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQ 458 (496)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~ 458 (496)
+.+++.++|.++++|+..++.+.+++++..
T Consensus 365 -----------------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 394 (416)
T 2x6q_A 365 -----------------DANEAVEVVLYLLKHPEVSKEMGAKAKERV 394 (416)
T ss_dssp -----------------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred -----------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 567899999999998765556666665544
No 39
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.08 E-value=1.3e-08 Score=100.69 Aligned_cols=324 Identities=13% Similarity=0.073 Sum_probs=164.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC-C-CeEEEEeCCcchhhHHHHHHhhhcCCCCeEE-EEeeCCccccCCCCCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQN-G-AAITIVTTPANAARFKTVVARAMQSGLPLQL-IEIQFPYQEAGIPEGS 84 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~r-G-H~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~i~~~~~~~~l~~~~ 84 (496)
++|||++++ ++.++......++++|+++ | |+|+++++.............. ++.. +.++ ...
T Consensus 7 ~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-------~~~-- 71 (375)
T 3beo_A 7 ERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIF-----GITPDFDLN-------IMK-- 71 (375)
T ss_dssp SCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHH-----TCCCSEECC-------CCC--
T ss_pred cCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHc-----CCCCccccc-------cCC--
Confidence 458999998 4477888888999999987 5 8888777654432222211111 2221 1111 000
Q ss_pred CcccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCc---chHHHHHhcCCCeEEEecchHHHHHHHhhh
Q 010988 85 ENFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYP---WTVDTAARFNIPRISFHGFSCFCLLCLYNL 161 (496)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~---~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 161 (496)
.. ........ .....+.++++. .+||+|++....+ .+..+++..|+|++......
T Consensus 72 ~~------~~~~~~~~----~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~---------- 129 (375)
T 3beo_A 72 DR------QTLIDITT----RGLEGLDKVMKE--AKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL---------- 129 (375)
T ss_dssp TT------CCHHHHHH----HHHHHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC----------
T ss_pred Cc------ccHHHHHH----HHHHHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc----------
Confidence 00 01111111 123346667777 6999999853322 23456788999998632110
Q ss_pred cccccccccCCCCCccccCCCCCCcCCccccccCCCCChHHHHHHHHhhccccceEEEcChhhhhHHHHHHHHh-hcC-C
Q 010988 162 HTSKVHENVTSKSDYFVVPGLPDQIEMTKVQVPLMRENSKDFGELVLAADMKSYGIIINTFEELESEYVKEYKK-TKG-G 239 (496)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~-~~~-~ 239 (496)
. ....+ .. +. ....++.. ...++.++..+-...+ .+.. ..+ .
T Consensus 130 ---------~--~~~~~-----~~-------~~------~~~~~~~~--~~~~d~ii~~s~~~~~-----~~~~~g~~~~ 173 (375)
T 3beo_A 130 ---------R--TWDKY-----SP-------YP------EEMNRQLT--GVMADLHFSPTAKSAT-----NLQKENKDES 173 (375)
T ss_dssp ---------C--CSCTT-----SS-------TT------HHHHHHHH--HHHCSEEEESSHHHHH-----HHHHTTCCGG
T ss_pred ---------c--ccccc-----CC-------Ch------hHhhhhHH--hhhhheeeCCCHHHHH-----HHHHcCCCcc
Confidence 0 00000 00 00 11112111 1125566665533222 2222 222 3
Q ss_pred ceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhC-----CCCeE
Q 010988 240 KVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEAS-----KKPFI 314 (496)
Q Consensus 240 ~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~-----~~~~i 314 (496)
++..||........ . .... ....++.+-+ +++++|+++.|...... ..+..+++|++.. +.+++
T Consensus 174 ~i~vi~n~~~d~~~----~-~~~~--~~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i 242 (375)
T 3beo_A 174 RIFITGNTAIDALK----T-TVKE--TYSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVV 242 (375)
T ss_dssp GEEECCCHHHHHHH----H-HCCS--SCCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEE
T ss_pred cEEEECChhHhhhh----h-hhhh--hhhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEE
Confidence 67777732111000 0 0000 0011111112 24557777888754321 2355666766542 44443
Q ss_pred EEEeCCCCCchhhhhhhhhHHHHHHhC-CCcEEEeCcchh---hhhhccccccccccCCChhhHHHHHHhCCcEeccCCc
Q 010988 315 WVIRGGNNTSKEIQEWLLEEKFEERVK-GRGILILGWAPQ---VLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLF 390 (496)
Q Consensus 315 ~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq---~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~ 390 (496)
++.+. .. . +-+.+..... .++|.+.+++++ ..++..+++ +|+..| +.+.||+++|+|+|+....
T Consensus 243 --~~~g~-~~-~-----~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~ 310 (375)
T 3beo_A 243 --YPVHM-NP-V-----VRETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDT 310 (375)
T ss_dssp --EECCS-CH-H-----HHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSC
T ss_pred --EeCCC-CH-H-----HHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCC
Confidence 34332 11 1 1112222222 368998777664 467777887 998874 4588999999999998543
Q ss_pred cccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHH
Q 010988 391 GDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERE 448 (496)
Q Consensus 391 ~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~ 448 (496)
... ..++ ..|.|..++ .+.++|.++|.++++|++.++
T Consensus 311 ~~~----~e~v-~~g~g~~v~----------------~d~~~la~~i~~ll~~~~~~~ 347 (375)
T 3beo_A 311 TER----PEGI-EAGTLKLAG----------------TDEETIFSLADELLSDKEAHD 347 (375)
T ss_dssp CSC----HHHH-HTTSEEECC----------------SCHHHHHHHHHHHHHCHHHHH
T ss_pred CCC----ceee-cCCceEEcC----------------CCHHHHHHHHHHHHhChHhHh
Confidence 332 3343 557776652 267899999999999874333
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.83 E-value=1.7e-07 Score=96.03 Aligned_cols=169 Identities=11% Similarity=0.093 Sum_probs=91.1
Q ss_pred EEEEeeCCccCCChhhHHHHHHHHHh---CCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEE-EeCcchh--hhh
Q 010988 283 VVYVCLGSICNLTSSQMIELGLGLEA---SKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGIL-ILGWAPQ--VLI 356 (496)
Q Consensus 283 vI~vs~GS~~~~~~~~~~~~~~a~~~---~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~-v~~~~pq--~~~ 356 (496)
.+++..|.... ..-+..+++|+.. .+.+++++ |.+. . ...+. +- .+.... +++|. ..++... ..+
T Consensus 292 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~iv-G~g~-~--~~~~~-l~-~~~~~~-~~~v~~~~g~~~~~~~~~ 362 (485)
T 1rzu_A 292 PLFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVVL-GAGD-V--ALEGA-LL-AAASRH-HGRVGVAIGYNEPLSHLM 362 (485)
T ss_dssp CEEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEEE-ECBC-H--HHHHH-HH-HHHHHT-TTTEEEEESCCHHHHHHH
T ss_pred eEEEEEccCcc--ccCHHHHHHHHHHHHhcCceEEEE-eCCc-h--HHHHH-HH-HHHHhC-CCcEEEecCCCHHHHHHH
Confidence 46677888754 2223444444443 35665544 4432 1 01110 11 122222 46886 6788433 257
Q ss_pred hcccccccccc----CCChhhHHHHHHhCCcEeccCCccccchhHHHHHHHh---------hceEEecccCCCCCCcccc
Q 010988 357 LSHPSIGGFLT----HCGWNSSLEAISAGVPMITWPLFGDQFCNEKLIVQVL---------NIGVRIGVEVPLDFGEEEE 423 (496)
Q Consensus 357 l~~~~~~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~---------G~g~~l~~~~~~~~~~~~~ 423 (496)
+..+++ +|. =|--.++.||+++|+|+|+... ......+ +.- +.|..++.
T Consensus 363 ~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~----------- 424 (485)
T 1rzu_A 363 QAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFSP----------- 424 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEESS-----------
T ss_pred HhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeCC-----------
Confidence 888887 662 2344589999999999999765 2333444 232 57777754
Q ss_pred cccccCHHHHHHHHHHHh---cCChhHHHHHHHHHHHHHHHHHHhhhCCCh---HHHHHHHHHHHhcCCCCCCcc
Q 010988 424 IGVLVKKEDVVKAINMLM---NEGGERENRRKRAREFQMMAKRATEETGSS---SLMIKLLIQDIMHQPHSDHQH 492 (496)
Q Consensus 424 ~~~~~~~~~l~~~i~~lL---~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~---~~~~~~~~~~~~~~~~~~~~~ 492 (496)
-+.++|.++|.+++ +|++..+.+.+++++ +.=+- .....++.+.++..+++.|.|
T Consensus 425 ----~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~----------~~fs~~~~~~~~~~~y~~~~~~~~~~~~~ 485 (485)
T 1rzu_A 425 ----VTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK----------SDVSWEKSAGLYAALYSQLISKGHHHHHH 485 (485)
T ss_dssp ----CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT----------CCCBHHHHHHHHHHHHHHHTC--------
T ss_pred ----CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH----------HhCChHHHHHHHHHHHHHhhCCCCCcCCC
Confidence 47899999999999 666444444444431 22222 244555666777777665554
No 41
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.75 E-value=9.3e-07 Score=90.51 Aligned_cols=141 Identities=8% Similarity=0.001 Sum_probs=81.0
Q ss_pred EEEEeeCCccCCChhhHHHHHHHHHh---CCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEE-EeCcchh--hhh
Q 010988 283 VVYVCLGSICNLTSSQMIELGLGLEA---SKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGIL-ILGWAPQ--VLI 356 (496)
Q Consensus 283 vI~vs~GS~~~~~~~~~~~~~~a~~~---~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~-v~~~~pq--~~~ 356 (496)
.+++..|.... ..-+..+++|++. .+.+++++-.+.. ..... + ..+.... +++|. +.++... ..+
T Consensus 293 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~---~~~~~--l-~~~~~~~-~~~v~~~~g~~~~~~~~~ 363 (485)
T 2qzs_A 293 PLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGDP---VLQEG--F-LAAAAEY-PGQVGVQIGYHEAFSHRI 363 (485)
T ss_dssp CEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEECH---HHHHH--H-HHHHHHS-TTTEEEEESCCHHHHHHH
T ss_pred eEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCch---HHHHH--H-HHHHHhC-CCcEEEeCCCCHHHHHHH
Confidence 55566676643 2234445555544 3566555433321 00111 1 1122222 36785 7788433 357
Q ss_pred hcccccccccc----CCChhhHHHHHHhCCcEeccCCccccchhHHHHHHHh---------hceEEecccCCCCCCcccc
Q 010988 357 LSHPSIGGFLT----HCGWNSSLEAISAGVPMITWPLFGDQFCNEKLIVQVL---------NIGVRIGVEVPLDFGEEEE 423 (496)
Q Consensus 357 l~~~~~~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~---------G~g~~l~~~~~~~~~~~~~ 423 (496)
+..+++ +|. -|.-.++.||+++|+|+|+... ..+...+ +.- +.|..++.
T Consensus 364 ~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~----------- 425 (485)
T 2qzs_A 364 MGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFED----------- 425 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEECS-----------
T ss_pred HHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEECC-----------
Confidence 888887 662 2334578899999999999754 2334444 332 57777755
Q ss_pred cccccCHHHHHHHHHHHh---cCChhHHHHHHHH
Q 010988 424 IGVLVKKEDVVKAINMLM---NEGGERENRRKRA 454 (496)
Q Consensus 424 ~~~~~~~~~l~~~i~~lL---~~~~~~~~~~~~a 454 (496)
-+.++|.++|.+++ +|++..+.+.+++
T Consensus 426 ----~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 455 (485)
T 2qzs_A 426 ----SNAWSLLRAIRRAFVLWSRPSLWRFVQRQA 455 (485)
T ss_dssp ----SSHHHHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 37899999999999 6664444444444
No 42
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.69 E-value=4.1e-06 Score=83.68 Aligned_cols=148 Identities=11% Similarity=0.143 Sum_probs=84.1
Q ss_pred eEEEEeeCCccCCChhhHHHHHHHHHh-----CCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhC-CCc-------EEEe
Q 010988 282 SVVYVCLGSICNLTSSQMIELGLGLEA-----SKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVK-GRG-------ILIL 348 (496)
Q Consensus 282 ~vI~vs~GS~~~~~~~~~~~~~~a~~~-----~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~n-------v~v~ 348 (496)
..+++..|.... ...+..+++|+.. .+.+++++-.+.........+. +. .+....+ .++ +.+.
T Consensus 184 ~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~-~~-~~~~~~~l~~~v~~l~~vv~~~ 259 (413)
T 3oy2_A 184 DVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSI-AL-RELVASGVDNVFTHLNKIMINR 259 (413)
T ss_dssp SEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHH-HH-HHHHHHTCSCHHHHHTTEEEEC
T ss_pred ceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHH-HH-HHHHHcCcccccccccceeecc
Confidence 467777888643 2234445555543 4677666554442011000110 11 1112222 333 7788
Q ss_pred Ccchhh---hhhcccccccccc----CCChhhHHHHHHhCCcEeccCCccccchhHHHHHHHhhc---------------
Q 010988 349 GWAPQV---LILSHPSIGGFLT----HCGWNSSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNI--------------- 406 (496)
Q Consensus 349 ~~~pq~---~~l~~~~~~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~--------------- 406 (496)
+|+|+. .++..+++ +|. =|.-.++.||+++|+|+|+.... .....+ .-|.
T Consensus 260 g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v--~~~~~~~i~~~~~~~~~~~ 331 (413)
T 3oy2_A 260 TVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYF--SGDCVYKIKPSAWISVDDR 331 (413)
T ss_dssp SCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHS--CTTTSEEECCCEEEECTTT
T ss_pred CcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHH--ccCcccccccccccccccc
Confidence 999854 46777777 663 23345899999999999986542 233333 2222
Q ss_pred -eE--EecccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q 010988 407 -GV--RIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREF 457 (496)
Q Consensus 407 -g~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l 457 (496)
|. .+.. -+.+++.++| ++++|++..+.+.+++++.
T Consensus 332 ~G~~gl~~~---------------~d~~~la~~i-~l~~~~~~~~~~~~~a~~~ 369 (413)
T 3oy2_A 332 DGIGGIEGI---------------IDVDDLVEAF-TFFKDEKNRKEYGKRVQDF 369 (413)
T ss_dssp CSSCCEEEE---------------CCHHHHHHHH-HHTTSHHHHHHHHHHHHHH
T ss_pred cCcceeeCC---------------CCHHHHHHHH-HHhcCHHHHHHHHHHHHHH
Confidence 33 3332 3899999999 9999875555555555554
No 43
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.64 E-value=6e-06 Score=88.86 Aligned_cols=150 Identities=9% Similarity=0.056 Sum_probs=87.2
Q ss_pred eEEEEeeCCccCCChhhHHHHHHHHHhC-----CCCeEEEEeCCC--C-Cch---hhhhhhhhHHHHHHh-CCCcEEEeC
Q 010988 282 SVVYVCLGSICNLTSSQMIELGLGLEAS-----KKPFIWVIRGGN--N-TSK---EIQEWLLEEKFEERV-KGRGILILG 349 (496)
Q Consensus 282 ~vI~vs~GS~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~--~-~~~---~~~~~~lp~~~~~~~-~~~nv~v~~ 349 (496)
..+++..|.... ..-+..+++|+... +.+++++-++.. + ... .... +- .+.... ..++|.+.+
T Consensus 572 ~~vIl~vGRl~~--~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~--L~-~li~~lgL~~~V~flG 646 (816)
T 3s28_A 572 KPILFTMARLDR--VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKK--MY-DLIEEYKLNGQFRWIS 646 (816)
T ss_dssp SCEEEEECCCCT--TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHH--HH-HHHHHTTCBBBEEEEC
T ss_pred CeEEEEEccCcc--cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHH--HH-HHHHHcCCCCcEEEcc
Confidence 356677787653 33456666776654 345444433320 0 000 0111 11 111122 257888887
Q ss_pred ----cchhhhhhc----cccccccccC----CChhhHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEecccCCCC
Q 010988 350 ----WAPQVLILS----HPSIGGFLTH----CGWNSSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLD 417 (496)
Q Consensus 350 ----~~pq~~~l~----~~~~~~~I~H----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~ 417 (496)
++|+.++.. .+++ +|.= |--.++.||+++|+|+|+- |-......+ +.-+.|+.++..
T Consensus 647 ~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gllv~p~---- 715 (816)
T 3s28_A 647 SQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFHIDPY---- 715 (816)
T ss_dssp CCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEEECTT----
T ss_pred CccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEEeCCC----
Confidence 455555544 3445 6632 3345899999999999995 444555556 466678877654
Q ss_pred CCcccccccccCHHHHHHHHHHHh----cCChhHHHHHHHHHHHH
Q 010988 418 FGEEEEIGVLVKKEDVVKAINMLM----NEGGERENRRKRAREFQ 458 (496)
Q Consensus 418 ~~~~~~~~~~~~~~~l~~~i~~lL----~~~~~~~~~~~~a~~l~ 458 (496)
+.+++.++|.+++ +|++..+.+.+++++..
T Consensus 716 -----------D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 716 -----------HGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp -----------SHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred -----------CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 7888888887666 88866666666665544
No 44
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.58 E-value=4.7e-05 Score=79.42 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=67.2
Q ss_pred CcEEEeCcchhh---hhhccccccccc--c-CCChhhHHHHHHhCCcEeccCCccccchh-HHHHHHHhhceEEecccCC
Q 010988 343 RGILILGWAPQV---LILSHPSIGGFL--T-HCGWNSSLEAISAGVPMITWPLFGDQFCN-EKLIVQVLNIGVRIGVEVP 415 (496)
Q Consensus 343 ~nv~v~~~~pq~---~~l~~~~~~~~I--~-HGG~gs~~eal~~GvP~v~~P~~~DQ~~n-a~r~~e~~G~g~~l~~~~~ 415 (496)
++|.+.+++|+. .++..+++ || + .|+-+++.||+++|+|+|++|-..=.... +..+ +..|+...+ .
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v--~-- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMN--V-- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGB--C--
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhh--c--
Confidence 789999999854 46777777 65 2 36667899999999999998753222222 3445 455665433 2
Q ss_pred CCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHH
Q 010988 416 LDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQ 458 (496)
Q Consensus 416 ~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~ 458 (496)
-+.+++.++|.++++|++.++.+++++++..
T Consensus 507 ------------~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 537 (568)
T 2vsy_A 507 ------------ADDAAFVAKAVALASDPAALTALHARVDVLR 537 (568)
T ss_dssp ------------SSHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Confidence 2788999999999998865556666555543
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.45 E-value=2.3e-06 Score=74.86 Aligned_cols=142 Identities=11% Similarity=0.142 Sum_probs=92.3
Q ss_pred EEEEeeCCccCCChhhHHHHHHHHHhC-CCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchh---hhhhc
Q 010988 283 VVYVCLGSICNLTSSQMIELGLGLEAS-KKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQ---VLILS 358 (496)
Q Consensus 283 vI~vs~GS~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq---~~~l~ 358 (496)
.+++..|+... ...+..++++++.. +.+++++ +.+. ..+.+.+ +..+. ..-..+||.+.+|+|+ ..++.
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~-G~~~-~~~~l~~--~~~~~-~~~l~~~v~~~g~~~~~e~~~~~~ 96 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIV-GWFS-KGDHAER--YARKI-MKIAPDNVKFLGSVSEEELIDLYS 96 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEE-BCCC-TTSTHHH--HHHHH-HHHSCTTEEEEESCCHHHHHHHHH
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEE-ecCc-cHHHHHH--HHHhh-hcccCCcEEEeCCCCHHHHHHHHH
Confidence 44566777643 34466778888876 5665554 4443 2222322 11100 1123679999999997 56888
Q ss_pred ccccccccc---CCChh-hHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHH
Q 010988 359 HPSIGGFLT---HCGWN-SSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVV 434 (496)
Q Consensus 359 ~~~~~~~I~---HGG~g-s~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~ 434 (496)
.+++ +|. +.|.+ ++.||+++|+|+|+... ..+...+ +..+.|..+ . -+.+++.
T Consensus 97 ~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-~---------------~d~~~l~ 153 (177)
T 2f9f_A 97 RCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-N---------------ADVNEII 153 (177)
T ss_dssp HCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-C---------------SCHHHHH
T ss_pred hCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-C---------------CCHHHHH
Confidence 8888 665 34444 89999999999998754 4455555 456678777 3 4789999
Q ss_pred HHHHHHhcCChh-HHHHHHHH
Q 010988 435 KAINMLMNEGGE-RENRRKRA 454 (496)
Q Consensus 435 ~~i~~lL~~~~~-~~~~~~~a 454 (496)
++|.++++|+++ ++.+++++
T Consensus 154 ~~i~~l~~~~~~~~~~~~~~a 174 (177)
T 2f9f_A 154 DAMKKVSKNPDKFKKDCFRRA 174 (177)
T ss_dssp HHHHHHHHCTTTTHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHH
Confidence 999999988854 34444444
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.45 E-value=7.8e-05 Score=73.47 Aligned_cols=98 Identities=13% Similarity=0.190 Sum_probs=70.5
Q ss_pred cEEEeCcch-hhhhhcccccccccc---C--CChhhHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEecccCCCC
Q 010988 344 GILILGWAP-QVLILSHPSIGGFLT---H--CGWNSSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLD 417 (496)
Q Consensus 344 nv~v~~~~p-q~~~l~~~~~~~~I~---H--GG~gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~ 417 (496)
++++.++.. -..++..+++ ++. . +|..++.||+++|+|+|+-|...+.......+ ...|.++.. .
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~--~---- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEV--K---- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEEC--C----
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEe--C----
Confidence 566666544 3557777776 553 2 23478999999999999867666666666555 355665443 3
Q ss_pred CCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 010988 418 FGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAK 462 (496)
Q Consensus 418 ~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~ 462 (496)
+.++|.++|.++|+| +.++.|.+++++..+.-.
T Consensus 332 -----------d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 332 -----------NETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp -----------SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred -----------CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 668899999999998 778889988888776644
No 47
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.14 E-value=0.00028 Score=70.27 Aligned_cols=76 Identities=11% Similarity=0.050 Sum_probs=57.6
Q ss_pred CCcEEEeCcchhh---hhhcccccccccc---CCCh-hhHHHHH-------HhCCcEeccCCccccchhHHHHHHHhhce
Q 010988 342 GRGILILGWAPQV---LILSHPSIGGFLT---HCGW-NSSLEAI-------SAGVPMITWPLFGDQFCNEKLIVQVLNIG 407 (496)
Q Consensus 342 ~~nv~v~~~~pq~---~~l~~~~~~~~I~---HGG~-gs~~eal-------~~GvP~v~~P~~~DQ~~na~r~~e~~G~g 407 (496)
.+||.+.+++|+. .++..+++ +|. .-|. +++.||+ ++|+|+|+... + +.-..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcce
Confidence 5789999999865 46777887 553 3343 5688999 99999999765 5 354557
Q ss_pred EE-ecccCCCCCCcccccccccCHHHHHHHHHHHhcCCh
Q 010988 408 VR-IGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGG 445 (496)
Q Consensus 408 ~~-l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~ 445 (496)
.. ++. -+.++|.++|.++++|+.
T Consensus 331 ~l~v~~---------------~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGYTP---------------GNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEECT---------------TCHHHHHHHHHHHHHCCC
T ss_pred EEEeCC---------------CCHHHHHHHHHHHHhCcc
Confidence 66 554 378999999999999873
No 48
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=97.92 E-value=0.00011 Score=73.34 Aligned_cols=81 Identities=20% Similarity=0.124 Sum_probs=56.6
Q ss_pred CCcEEEeCcchhh---hhhcccccccccc--C-CCh-hhHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEecccC
Q 010988 342 GRGILILGWAPQV---LILSHPSIGGFLT--H-CGW-NSSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEV 414 (496)
Q Consensus 342 ~~nv~v~~~~pq~---~~l~~~~~~~~I~--H-GG~-gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~ 414 (496)
..+|...+++|+. .++..+++ ||. . =|. .++.||+++|+|+|+ -..+ ....+ +.-..|+.++.
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeCC--
Confidence 4588999999865 46777777 664 2 133 467999999999998 3222 12233 34346776655
Q ss_pred CCCCCcccccccccCHHHHHHHHHHHhcCCh
Q 010988 415 PLDFGEEEEIGVLVKKEDVVKAINMLMNEGG 445 (496)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~ 445 (496)
-+++.|.++|.++++|++
T Consensus 364 -------------~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 364 -------------LNPENIAETLVELCMSFN 381 (413)
T ss_dssp -------------CSHHHHHHHHHHHHHHTC
T ss_pred -------------CCHHHHHHHHHHHHcCHH
Confidence 478999999999999874
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.85 E-value=0.00017 Score=61.83 Aligned_cols=145 Identities=17% Similarity=0.214 Sum_probs=87.4
Q ss_pred eEEEEeeCCccCCChhhHHHHHHHHHhCC--CCe-EEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhh---h
Q 010988 282 SVVYVCLGSICNLTSSQMIELGLGLEASK--KPF-IWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQV---L 355 (496)
Q Consensus 282 ~vI~vs~GS~~~~~~~~~~~~~~a~~~~~--~~~-i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~---~ 355 (496)
+++++..|+... ...+..+++|+..+. .++ ++.+|.+. ..+...+ ..... ..++.+ +|+|+. .
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-~~~~~~~------~~~~~-~~~v~~-g~~~~~~~~~ 70 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP-DEKKIKL------LAQKL-GVKAEF-GFVNSNELLE 70 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST-THHHHHH------HHHHH-TCEEEC-CCCCHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc-cHHHHHH------HHHHc-CCeEEE-eecCHHHHHH
Confidence 467788888754 334667777777653 133 33344443 2222211 11122 238888 999864 4
Q ss_pred hhcccccccccc----CCChhhHHHHHHhCC-cEeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCH
Q 010988 356 ILSHPSIGGFLT----HCGWNSSLEAISAGV-PMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKK 430 (496)
Q Consensus 356 ~l~~~~~~~~I~----HGG~gs~~eal~~Gv-P~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~ 430 (496)
++..+++ +|. -|.-.++.||+++|+ |+|+..... .....+ +.-+. .+.. -+.
T Consensus 71 ~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~-~~~~~--~~~~---------------~~~ 127 (166)
T 3qhp_A 71 ILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFA-LDERS--LFEP---------------NNA 127 (166)
T ss_dssp HHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGC-SSGGG--EECT---------------TCH
T ss_pred HHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhc-cCCce--EEcC---------------CCH
Confidence 6777777 664 233458999999996 999933211 111222 22222 2322 478
Q ss_pred HHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Q 010988 431 EDVVKAINMLMNEGGERENRRKRAREFQMM 460 (496)
Q Consensus 431 ~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~ 460 (496)
+++.++|.++++|++.++.+.+++++..+.
T Consensus 128 ~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 157 (166)
T 3qhp_A 128 KDLSAKIDWWLENKLERERMQNEYAKSALN 157 (166)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 999999999999887777777777776543
No 50
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.59 E-value=0.032 Score=57.36 Aligned_cols=139 Identities=9% Similarity=0.020 Sum_probs=73.2
Q ss_pred EEEEeeCCccCCChhhHHHHHHHHHh---CCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhh---hh
Q 010988 283 VVYVCLGSICNLTSSQMIELGLGLEA---SKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQV---LI 356 (496)
Q Consensus 283 vI~vs~GS~~~~~~~~~~~~~~a~~~---~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~---~~ 356 (496)
++++..|.... ..-+..+++|+.. .+.++++...+.. ..... + ... ....+.++.+....+.. .+
T Consensus 328 p~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~~----~~~~~-~-~~~-~~~~~~~v~~~~~~~~~~~~~~ 398 (536)
T 3vue_A 328 PLIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGKK----KFEKL-L-KSM-EEKYPGKVRAVVKFNAPLAHLI 398 (536)
T ss_dssp CEEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBCH----HHHHH-H-HHH-HHHSTTTEEEECSCCHHHHHHH
T ss_pred cEEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccCc----hHHHH-H-HHH-HhhcCCceEEEEeccHHHHHHH
Confidence 45566677643 2335556666654 4556555433322 11110 1 111 12236788887777654 35
Q ss_pred hccccccccccC---CChh-hHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHH
Q 010988 357 LSHPSIGGFLTH---CGWN-SSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKED 432 (496)
Q Consensus 357 l~~~~~~~~I~H---GG~g-s~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
+..+++ ||.= =|.| +++||+++|+|+|+-... .....+ ++-.-|..........+-- ...+.+.
T Consensus 399 ~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V-~dg~~G~~~~~~~~~g~l~-----~~~d~~~ 466 (536)
T 3vue_A 399 MAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTV-IEGKTGFHMGRLSVDCKVV-----EPSDVKK 466 (536)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHC-CBTTTEEECCCCCSCTTCC-----CHHHHHH
T ss_pred HHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCC----Cchhee-eCCCCccccccCCCceeEE-----CCCCHHH
Confidence 666776 6642 2333 889999999999986543 333334 2333344332210000000 0246788
Q ss_pred HHHHHHHHhc
Q 010988 433 VVKAINMLMN 442 (496)
Q Consensus 433 l~~~i~~lL~ 442 (496)
|.++|+++|+
T Consensus 467 la~ai~ral~ 476 (536)
T 3vue_A 467 VAATLKRAIK 476 (536)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988875
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.59 E-value=0.00068 Score=69.85 Aligned_cols=153 Identities=14% Similarity=0.044 Sum_probs=96.1
Q ss_pred eEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEEEE--eCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhh--
Q 010988 282 SVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVI--RGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLIL-- 357 (496)
Q Consensus 282 ~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~~--~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l-- 357 (496)
.++|.+|+......++.+....+.+++.+..++|.. +... .. ... +-..+...-..+.+.+.+.+|..+.+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~--g~-~~~--~~~~~~~~GI~~Rv~F~g~~p~~e~la~ 515 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN--GI-THP--YVERFIKSYLGDSATAHPHSPYHQYLRI 515 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC--GG-GHH--HHHHHHHHHHGGGEEEECCCCHHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc--hh-hHH--HHHHHHHcCCCccEEEcCCCCHHHHHHH
Confidence 599999999888889998888888888776777643 3221 10 111 11111111113578888999876544
Q ss_pred -ccccccccc---cCCChhhHHHHHHhCCcEeccCCccccchh-HHHHHHHhhceEEecccCCCCCCcccccccccCHHH
Q 010988 358 -SHPSIGGFL---THCGWNSSLEAISAGVPMITWPLFGDQFCN-EKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKED 432 (496)
Q Consensus 358 -~~~~~~~~I---~HGG~gs~~eal~~GvP~v~~P~~~DQ~~n-a~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
..+++ ++ ..+|..|++||+++|||+|..+-..=--.. +..+ ...|+...+- ..+.++
T Consensus 516 y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LI---------------A~d~ee 577 (631)
T 3q3e_A 516 LHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLI---------------ANTVDE 577 (631)
T ss_dssp HHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGE---------------ESSHHH
T ss_pred HhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCccee---------------cCCHHH
Confidence 56665 54 337789999999999999998753211111 2233 2455543211 146788
Q ss_pred HHHHHHHHhcCChhHHHHHHHHHHH
Q 010988 433 VVKAINMLMNEGGERENRRKRAREF 457 (496)
Q Consensus 433 l~~~i~~lL~~~~~~~~~~~~a~~l 457 (496)
..+...++.+|++..+.+|+++++-
T Consensus 578 Yv~~Av~La~D~~~l~~LR~~Lr~~ 602 (631)
T 3q3e_A 578 YVERAVRLAENHQERLELRRYIIEN 602 (631)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 8888888999886655565555443
No 52
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.53 E-value=0.0021 Score=56.57 Aligned_cols=93 Identities=12% Similarity=0.081 Sum_probs=65.6
Q ss_pred cEEE-eCcchhh---hhhccccccccccC----CChhhHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEecccCC
Q 010988 344 GILI-LGWAPQV---LILSHPSIGGFLTH----CGWNSSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVP 415 (496)
Q Consensus 344 nv~v-~~~~pq~---~~l~~~~~~~~I~H----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~ 415 (496)
+|.+ .+++++. .++..+++ +|.- |.-.++.||+++|+|+|+.... .....+ .-+.|..++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEecC---
Confidence 8999 9999853 57778887 6632 2245789999999999987543 222222 2356766654
Q ss_pred CCCCcccccccccCHHHHHHHHHHHhc-CChhHHHHHHHHHHHHH
Q 010988 416 LDFGEEEEIGVLVKKEDVVKAINMLMN-EGGERENRRKRAREFQM 459 (496)
Q Consensus 416 ~~~~~~~~~~~~~~~~~l~~~i~~lL~-~~~~~~~~~~~a~~l~~ 459 (496)
-+.+++.++|.++++ |+...+.+.+++++...
T Consensus 165 ------------~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 165 ------------GDPGELANAILKALELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp ------------TCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 378999999999999 88666666666665543
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.47 E-value=0.0017 Score=69.50 Aligned_cols=154 Identities=14% Similarity=0.157 Sum_probs=101.9
Q ss_pred CCeEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHH-HhCCCcEEEeCcchhhhhhc
Q 010988 280 PNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEE-RVKGRGILILGWAPQVLILS 358 (496)
Q Consensus 280 ~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~nv~v~~~~pq~~~l~ 358 (496)
++.+||+||......+++.+..-++-+++.+.-++|.+.... .. ... +-..+.. .+.++.+++.+..|..+-|.
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~-~~--~~~--l~~~~~~~gi~~~r~~f~~~~~~~~~l~ 595 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA-VG--EPN--IQQYAQNMGLPQNRIIFSPVAPKEEHVR 595 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG-GG--HHH--HHHHHHHTTCCGGGEEEEECCCHHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH-HH--HHH--HHHHHHhcCCCcCeEEECCCCCHHHHHH
Confidence 456999999999999999999988888888888888887664 11 111 2222211 12356788888888665443
Q ss_pred -ccccccccc---CCChhhHHHHHHhCCcEeccCCcc-ccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHH
Q 010988 359 -HPSIGGFLT---HCGWNSSLEAISAGVPMITWPLFG-DQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDV 433 (496)
Q Consensus 359 -~~~~~~~I~---HGG~gs~~eal~~GvP~v~~P~~~-DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l 433 (496)
+..+++++. .+|..|++|||+.|||+|.++-.. =...-+..+ ..+|+...+ .-+.++-
T Consensus 596 ~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~i----------------a~~~~~Y 658 (723)
T 4gyw_A 596 RGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELI----------------AKNRQEY 658 (723)
T ss_dssp HGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGB----------------CSSHHHH
T ss_pred HhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCcccc----------------cCCHHHH
Confidence 333344764 889999999999999999999422 122235555 477776544 2456666
Q ss_pred HHHHHHHhcCChhHHHHHHHHH
Q 010988 434 VKAINMLMNEGGERENRRKRAR 455 (496)
Q Consensus 434 ~~~i~~lL~~~~~~~~~~~~a~ 455 (496)
.+.-.++-+|+.+...+|++.+
T Consensus 659 ~~~a~~la~d~~~l~~lr~~l~ 680 (723)
T 4gyw_A 659 EDIAVKLGTDLEYLKKVRGKVW 680 (723)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHH
Confidence 6666667777655444544443
No 54
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.46 E-value=0.0032 Score=61.15 Aligned_cols=107 Identities=13% Similarity=0.073 Sum_probs=73.1
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHhhhcCCCCeE-EEEeeCCccccCCCC
Q 010988 6 SSQQPHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTPANAARFKTVVARAMQSGLPLQ-LIEIQFPYQEAGIPE 82 (496)
Q Consensus 6 ~~~~~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~i~~~~~~~~l~~ 82 (496)
+.+++||+++-....|++.-...+.+.|+++ +.+|++++.+.+.+.++. .+.+. ++.++. .
T Consensus 5 ~l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~--------~p~vd~vi~~~~--------~ 68 (349)
T 3tov_A 5 ELDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY--------NPNIDELIVVDK--------K 68 (349)
T ss_dssp CCTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS--------CTTCSEEEEECC--------S
T ss_pred CCCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc--------CCCccEEEEeCc--------c
Confidence 4678899999999999999999999999988 999999999987766543 23343 444430 0
Q ss_pred CCCcccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCC-eEEEEcCCCcchHHHHHhcCCCeEE
Q 010988 83 GSENFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKP-SCIVSDMCYPWTVDTAARFNIPRIS 146 (496)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~p-DlVI~D~~~~~a~~~A~~lgiP~v~ 146 (496)
. ....+. .+. .+.+.++. .+| |++|.=....-...++...|+|..+
T Consensus 69 ~-----------~~~~~~----~~~-~l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 G-----------RHNSIS----GLN-EVAREINA--KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp S-----------HHHHHH----HHH-HHHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred c-----------ccccHH----HHH-HHHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0 001111 111 22333444 489 9999765555566788889999876
No 55
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.98 E-value=0.018 Score=55.55 Aligned_cols=103 Identities=13% Similarity=-0.005 Sum_probs=65.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHhhhcCCCCe-EEEEeeCCccccCCCCCCCc
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTPANAARFKTVVARAMQSGLPL-QLIEIQFPYQEAGIPEGSEN 86 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~i~~~~~~~~l~~~~~~ 86 (496)
|||+++.....|++.-...+.+.|+++ +.+|++++.+.+.+.++. .+.+ +++.++. ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~--------~p~i~~v~~~~~-------~~~--- 62 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR--------MPEVNEAIPMPL-------GHG--- 62 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT--------CTTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc--------CCccCEEEEecC-------Ccc---
Confidence 599999988899999999999999987 999999999866554322 1234 3333320 000
Q ss_pred ccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEE
Q 010988 87 FDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRIS 146 (496)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~ 146 (496)
. ..+. ....+.+.++. .+||+||.=....-...++...|+|...
T Consensus 63 ----~--~~~~--------~~~~l~~~l~~--~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 63 ----A--LEIG--------ERRKLGHSLRE--KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp --------CHH--------HHHHHHHHTTT--TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ----c--cchH--------HHHHHHHHHHh--cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0 0000 11233344555 6899999333334556778888999854
No 56
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.68 E-value=0.0069 Score=58.41 Aligned_cols=111 Identities=14% Similarity=0.182 Sum_probs=78.4
Q ss_pred cEEEeCcchhhhh---hccccccccccCCCh---------hhHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEec
Q 010988 344 GILILGWAPQVLI---LSHPSIGGFLTHCGW---------NSSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIG 411 (496)
Q Consensus 344 nv~v~~~~pq~~~---l~~~~~~~~I~HGG~---------gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~ 411 (496)
||...+|+|..++ |..++..++.+-+.. +-+.|++++|+|+|+.+ ...++..+ ++.|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 9999999998765 445566555533333 24789999999999754 56778888 6999998873
Q ss_pred ccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHH
Q 010988 412 VEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSSSLMIKLLIQDI 482 (496)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 482 (496)
+.+++.++|..+. +++.+.|++|+++.+..++ .|--+...+.+.+.++
T Consensus 290 -----------------~~~e~~~~i~~l~--~~~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 -----------------DVEEAIMKVKNVN--EDEYIELVKNVRSFNPILR----KGFFTRRLLTESVFQA 337 (339)
T ss_dssp -----------------SHHHHHHHHHHCC--HHHHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHHHH
T ss_pred -----------------CHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHh
Confidence 3467888888865 3457789999999888765 3444445555544443
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=95.41 E-value=0.2 Score=47.62 Aligned_cols=44 Identities=11% Similarity=0.021 Sum_probs=39.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHH
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTPANAARFK 53 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~ 53 (496)
|||+++-....|++.-...+.++|+++ +.+|++++.+.+.+.++
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~ 46 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPS 46 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHh
Confidence 599999999999999999999999988 99999999998766554
No 58
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=91.88 E-value=2.2 Score=38.06 Aligned_cols=108 Identities=9% Similarity=-0.011 Sum_probs=62.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGS 84 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~ 84 (496)
.+||||+|+.+++.+ -+.++.+.|.+. +++|..+.+..-...+...... .++.+..++ +..+
T Consensus 20 ~~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~-----~gIp~~~~~--------~~~~ 83 (229)
T 3auf_A 20 GHMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARR-----AGVDALHMD--------PAAY 83 (229)
T ss_dssp TTCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHH-----TTCEEEECC--------GGGS
T ss_pred CCCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHH-----cCCCEEEEC--------cccc
Confidence 457899999877642 367777888776 6888766654222222222221 367776543 1111
Q ss_pred CcccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCC-CcchHHHHHhcCCCeEEEe
Q 010988 85 ENFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMC-YPWTVDTAARFNIPRISFH 148 (496)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~-~~~a~~~A~~lgiP~v~~~ 148 (496)
.+ -+.+.+++.+.++. .+||+||+-.+ ..-...+...+...++.++
T Consensus 84 ~~----------------r~~~~~~~~~~l~~--~~~Dliv~agy~~IL~~~~l~~~~~~~iNiH 130 (229)
T 3auf_A 84 PS----------------RTAFDAALAERLQA--YGVDLVCLAGYMRLVRGPMLTAFPNRILNIH 130 (229)
T ss_dssp SS----------------HHHHHHHHHHHHHH--TTCSEEEESSCCSCCCHHHHHHSTTCEEEEE
T ss_pred cc----------------hhhccHHHHHHHHh--cCCCEEEEcChhHhCCHHHHhhccCCEEEEc
Confidence 00 01233456677777 79999998754 3344555566666666654
No 59
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=91.25 E-value=2.9 Score=37.02 Aligned_cols=108 Identities=11% Similarity=-0.029 Sum_probs=60.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCc
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGA--AITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSEN 86 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH--~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~ 86 (496)
|+||+|+.+++.+ -+..+.+.|.+.+| +|..+.+.............. ++.+..++ +..+.+
T Consensus 1 m~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~-----gIp~~~~~--------~~~~~~ 64 (216)
T 2ywr_A 1 MLKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH-----NVECKVIQ--------RKEFPS 64 (216)
T ss_dssp CEEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH-----TCCEEECC--------GGGSSS
T ss_pred CCEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc-----CCCEEEeC--------cccccc
Confidence 4699988766643 46777888888888 776665432222222222222 56665543 111100
Q ss_pred ccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCC-CcchHHHHHhcCCCeEEEecc
Q 010988 87 FDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMC-YPWTVDTAARFNIPRISFHGF 150 (496)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~-~~~a~~~A~~lgiP~v~~~~~ 150 (496)
-+...+++.+.++. .+||+||+-.+ ..-...+...+...++.++++
T Consensus 65 ----------------r~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 ----------------KKEFEERMALELKK--KGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp ----------------HHHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred ----------------hhhhhHHHHHHHHh--cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 11233456677777 79999998754 334455556565666665533
No 60
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=90.05 E-value=17 Score=36.46 Aligned_cols=109 Identities=15% Similarity=0.116 Sum_probs=69.9
Q ss_pred cEEEeCcchhh---hhhcccccccccc---CCChh-hHHHHHHhC---CcEeccCCccccchhHHHHHHHhh-ceEEecc
Q 010988 344 GILILGWAPQV---LILSHPSIGGFLT---HCGWN-SSLEAISAG---VPMITWPLFGDQFCNEKLIVQVLN-IGVRIGV 412 (496)
Q Consensus 344 nv~v~~~~pq~---~~l~~~~~~~~I~---HGG~g-s~~eal~~G---vP~v~~P~~~DQ~~na~r~~e~~G-~g~~l~~ 412 (496)
.|.....+|+. +++..+++ +|. .=|+| +..|++++| .|+|+--+.+ .+ +.+| -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~----~~l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AA----EVLGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----TH----HHHGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CH----HHhCCCEEEECC
Confidence 57766777764 45556666 553 46888 457999996 5555433222 22 2333 4777766
Q ss_pred cCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHhc
Q 010988 413 EVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSSSLMIKLLIQDIMH 484 (496)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 484 (496)
.+.+.+.++|.++|+++.+ +-+++.+++.+... .-+...-++.|+++|..
T Consensus 423 ---------------~D~~~lA~AI~~aL~m~~~--er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 ---------------FDLVEQAEAISAALAAGPR--QRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp ---------------TBHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHH
T ss_pred ---------------CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhh
Confidence 4889999999999987632 33444444444433 34667888888888854
No 61
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=87.57 E-value=3.9 Score=38.87 Aligned_cols=42 Identities=10% Similarity=0.114 Sum_probs=35.7
Q ss_pred CCCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 010988 8 QQPHFVLFPF-LAQGHMIPMIDIGRLLAQNGAAITIVTTPANA 49 (496)
Q Consensus 8 ~~~~il~~~~-~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (496)
++++|+|+.. ++-|-..-..++|..|+++|++|.++..+...
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 4577877776 67999999999999999999999999887544
No 62
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=87.20 E-value=7.6 Score=34.11 Aligned_cols=107 Identities=11% Similarity=0.053 Sum_probs=60.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCc
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSEN 86 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~ 86 (496)
|+||.++.+++.+ -+.++.++|.+. +|+|..+.+..-...+...... .++.+..++ +..+.
T Consensus 3 m~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~-----~gIp~~~~~--------~~~~~- 65 (212)
T 3av3_A 3 MKRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAAR-----ENVPAFVFS--------PKDYP- 65 (212)
T ss_dssp CEEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHH-----TTCCEEECC--------GGGSS-
T ss_pred CcEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHH-----cCCCEEEeC--------ccccc-
Confidence 5688888776643 366677888777 7899877654222222222222 256665543 11110
Q ss_pred ccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCeEEEec
Q 010988 87 FDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCY-PWTVDTAARFNIPRISFHG 149 (496)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~-~~a~~~A~~lgiP~v~~~~ 149 (496)
. -+...+++.+.++. .+||+||+-.+. .-...+...+...++.+++
T Consensus 66 -----~----------~~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 112 (212)
T 3av3_A 66 -----S----------KAAFESEILRELKG--RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHP 112 (212)
T ss_dssp -----S----------HHHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHHHTTTCEEEEES
T ss_pred -----c----------hhhhHHHHHHHHHh--cCCCEEEEchhhhhCCHHHHhhhcCCEEEEec
Confidence 0 01123456677777 799999977543 3445555666666666543
No 63
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=86.01 E-value=4.2 Score=40.85 Aligned_cols=109 Identities=15% Similarity=0.160 Sum_probs=66.3
Q ss_pred EE-EeCcchhhh---hhcccccccccc---CCChh-hHHHHHHhCC-----cEeccCCccccchhHHHHHHHhhceEEec
Q 010988 345 IL-ILGWAPQVL---ILSHPSIGGFLT---HCGWN-SSLEAISAGV-----PMITWPLFGDQFCNEKLIVQVLNIGVRIG 411 (496)
Q Consensus 345 v~-v~~~~pq~~---~l~~~~~~~~I~---HGG~g-s~~eal~~Gv-----P~v~~P~~~DQ~~na~r~~e~~G~g~~l~ 411 (496)
|. +.+++|+.+ ++..+++ ||. .=|.| ++.||+++|+ |+|+--+.+ .+. ...-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~----~l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AAN----ELTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGG----TCTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHH----HhCCeEEEC
Confidence 44 467888654 5666666 664 34665 7889999998 666544322 111 112366665
Q ss_pred ccCCCCCCcccccccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHhcC
Q 010988 412 VEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSSSLMIKLLIQDIMHQ 485 (496)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~ 485 (496)
. .+.+.+.++|.++|+++.. ..+++.++.++.. ++ -+....++++++.+.+.
T Consensus 403 p---------------~d~~~lA~ai~~lL~~~~~--~r~~~~~~~~~~v----~~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 P---------------YDRDEVAAALDRALTMSLA--ERISRHAEMLDVI----VK-NDINHWQECFISDLKQI 454 (482)
T ss_dssp T---------------TCHHHHHHHHHHHHTCCHH--HHHHHHHHHHHHH----HH-TCHHHHHHHHHHHHHHS
T ss_pred C---------------CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHH----Hh-CCHHHHHHHHHHHHHhc
Confidence 5 4789999999999986522 1222222222222 22 25677888888888766
No 64
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=84.94 E-value=2.2 Score=34.63 Aligned_cols=48 Identities=10% Similarity=0.080 Sum_probs=38.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHH
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTV 55 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~ 55 (496)
++.||++.+.++.+|-....-++..|..+|++|+.+......+.+.+.
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~ 49 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKA 49 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHH
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 456999999999999999999999999999999988664433334333
No 65
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=84.25 E-value=17 Score=32.86 Aligned_cols=39 Identities=8% Similarity=0.123 Sum_probs=31.6
Q ss_pred CCCCCEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 6 SSQQPHFVLFPFL--AQGHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 6 ~~~~~~il~~~~~--~~GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
+.++||.+|++.. .-|=..=...|++.|+++|++|.++=
T Consensus 22 ~~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 22 FQSHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp CCSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 4456777666653 48899999999999999999999984
No 66
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=82.41 E-value=3.8 Score=37.10 Aligned_cols=39 Identities=23% Similarity=0.433 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeCCcchh
Q 010988 9 QPHFVLFPFLAQGHMIP-MIDIGRLLAQNGAAITIVTTPANAA 50 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p-~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (496)
|+|||+.- -.|-..| +..|+++|.+.| +|+++++...+.
T Consensus 1 Mp~ILlTN--DDGi~apGi~~L~~~l~~~g-~V~VvAP~~~~S 40 (251)
T 2wqk_A 1 MPTFLLVN--DDGYFSPGINALREALKSLG-RVVVVAPDRNLS 40 (251)
T ss_dssp -CEEEEEC--SSCTTCHHHHHHHHHHTTTS-EEEEEEESSCCT
T ss_pred CCEEEEEc--CCCCCcHHHHHHHHHHHhCC-CEEEEeeCCCCc
Confidence 56777664 3444444 778899999988 599999876654
No 67
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=82.04 E-value=11 Score=35.50 Aligned_cols=37 Identities=19% Similarity=0.157 Sum_probs=28.4
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 6 SSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 6 ~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|.+||||+|+..+..+ ....++|.++||+|..+.+.+
T Consensus 1 ~~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 1 SNAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp CCTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred CCCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 4679999999887654 344577888899999887754
No 68
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=81.85 E-value=7.4 Score=34.27 Aligned_cols=112 Identities=13% Similarity=-0.003 Sum_probs=59.9
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCC
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQ-NGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEG 83 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~-rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~ 83 (496)
|+.+++||+++.++..+- +.+|.+...+ .+++|..+.+..-.....+... ..++.+..++ +..
T Consensus 1 ~~~~~~riavl~SG~Gsn---l~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~-----~~gIp~~~~~--------~~~ 64 (215)
T 3tqr_A 1 MNREPLPIVVLISGNGTN---LQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQ-----QADIPTHIIP--------HEE 64 (215)
T ss_dssp ---CCEEEEEEESSCCHH---HHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHH-----HTTCCEEECC--------GGG
T ss_pred CCCCCcEEEEEEeCCcHH---HHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHH-----HcCCCEEEeC--------ccc
Confidence 446688999888766544 3445555544 3688887766322111111111 1267776654 111
Q ss_pred CCcccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCeEEEecc
Q 010988 84 SENFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCY-PWTVDTAARFNIPRISFHGF 150 (496)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~-~~a~~~A~~lgiP~v~~~~~ 150 (496)
+. . -....+++.+.+++ .+||+||+-.+. .-...+.+.+...++.++++
T Consensus 65 ~~------~----------r~~~d~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 65 FP------S----------RTDFESTLQKTIDH--YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp SS------S----------HHHHHHHHHHHHHT--TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred cC------c----------hhHhHHHHHHHHHh--cCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 10 0 00123467777888 799999987543 34455566666666765533
No 69
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=81.05 E-value=2.3 Score=37.40 Aligned_cols=45 Identities=16% Similarity=0.080 Sum_probs=38.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHH
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKT 54 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~ 54 (496)
+.||++...++.|-+. ...|.+.|.++|++|.++.++....++..
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHH
Confidence 4689888888888777 88999999999999999999976666554
No 70
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=81.03 E-value=21 Score=33.52 Aligned_cols=36 Identities=19% Similarity=-0.011 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|++|||+|+..+..+ ....++|.++||+|..+.+.+
T Consensus 5 ~~~mrivf~Gt~~fa-----~~~L~~L~~~~~~v~~Vvt~p 40 (318)
T 3q0i_A 5 SQSLRIVFAGTPDFA-----ARHLAALLSSEHEIIAVYTQP 40 (318)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHTSSSEEEEEECCC
T ss_pred ccCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEcCC
Confidence 567899999876432 345677888999998887753
No 71
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=80.90 E-value=21 Score=31.17 Aligned_cols=106 Identities=8% Similarity=-0.028 Sum_probs=60.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCcc
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSENF 87 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~~ 87 (496)
+||+++.++..+ .+.+|.+.+.+. +|+|..+.+............. .++.+..++ +..+.+
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~-----~gIp~~~~~--------~~~~~~- 63 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQ-----AGIATHTLI--------ASAFDS- 63 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHH-----TTCEEEECC--------GGGCSS-
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHH-----cCCcEEEeC--------cccccc-
Confidence 478888766553 467777777766 6888777654322222222222 367776643 111100
Q ss_pred cCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCeEEEec
Q 010988 88 DMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCY-PWTVDTAARFNIPRISFHG 149 (496)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~-~~a~~~A~~lgiP~v~~~~ 149 (496)
-+...+++.+.++. .+||+||+-.+. .-...+-..+...++.+++
T Consensus 64 ---------------r~~~~~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 109 (212)
T 1jkx_A 64 ---------------REAYDRELIHEIDM--YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHP 109 (212)
T ss_dssp ---------------HHHHHHHHHHHHGG--GCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred ---------------hhhccHHHHHHHHh--cCCCEEEEeChhhhCCHHHHhhccCCEEEEcc
Confidence 01233456677777 799999987543 3445555666666676543
No 72
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=80.25 E-value=6.5 Score=37.56 Aligned_cols=41 Identities=12% Similarity=0.138 Sum_probs=35.1
Q ss_pred CCCEEEEEcC-CCccCHHHHHHHHHHHH--hCCCeEEEEeCCcc
Q 010988 8 QQPHFVLFPF-LAQGHMIPMIDIGRLLA--QNGAAITIVTTPAN 48 (496)
Q Consensus 8 ~~~~il~~~~-~~~GHi~p~l~LA~~L~--~rGH~Vt~~~~~~~ 48 (496)
+.++|+|+.. ++-|-..-...+|..|+ ++|++|.++.....
T Consensus 16 ~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 16 DSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp TTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 4568877776 67999999999999999 89999999988753
No 73
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=79.95 E-value=2.1 Score=37.35 Aligned_cols=45 Identities=13% Similarity=-0.062 Sum_probs=36.4
Q ss_pred CCCCCCEEEEEcCCCccCHH-HHHHHHHHHHhCCCeEEEEeCCcchh
Q 010988 5 GSSQQPHFVLFPFLAQGHMI-PMIDIGRLLAQNGAAITIVTTPANAA 50 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~-p~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (496)
|+.++.||++...++ +..+ =...+.+.|.++|++|.++.++....
T Consensus 3 m~l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~ 48 (201)
T 3lqk_A 3 MNFAGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQT 48 (201)
T ss_dssp CCCTTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCC
T ss_pred CCcCCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHH
Confidence 556778998888777 4455 78999999999999999999985443
No 74
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=79.85 E-value=14 Score=34.87 Aligned_cols=105 Identities=9% Similarity=-0.010 Sum_probs=56.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc----hhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPAN----AARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGS 84 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~ 84 (496)
+|||+|+. --+-...+.++|.++||+|..+.+.+. ...+...... .++.+...+ ..
T Consensus 22 ~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~-----~gIpv~~~~----------~~ 81 (329)
T 2bw0_A 22 SMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEK-----DGVPVFKYS----------RW 81 (329)
T ss_dssp CCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHH-----HTCCEEECS----------CC
T ss_pred CCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHH-----cCCCEEecC----------cc
Confidence 48999983 112233567899999999987765211 1122222111 156555432 00
Q ss_pred CcccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCc-chHHHHHhcCCCeEEEecch
Q 010988 85 ENFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYP-WTVDTAARFNIPRISFHGFS 151 (496)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~-~a~~~A~~lgiP~v~~~~~~ 151 (496)
... ....+++.+.++. .+||++|+-.+.. -...+-......++.++++.
T Consensus 82 ~~~----------------~~~~~~~~~~l~~--~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 82 RAK----------------GQALPDVVAKYQA--LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp EET----------------TEECHHHHHHHHT--TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred ccc----------------ccccHHHHHHHHh--cCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 000 0112345566677 7999999775433 44455555666677766554
No 75
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=79.47 E-value=2.9 Score=40.48 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=32.2
Q ss_pred CCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 9 QPHFVLFPF-LAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 9 ~~~il~~~~-~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
|++|+++.. ++-|-..-...+|..|+++|++|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 568888876 4599999999999999999999999987
No 76
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=78.73 E-value=3.6 Score=42.90 Aligned_cols=44 Identities=18% Similarity=0.146 Sum_probs=30.7
Q ss_pred EEEeCcchh---------hhhhcccccccccc---CCChh-hHHHHHHhCCcEeccCCc
Q 010988 345 ILILGWAPQ---------VLILSHPSIGGFLT---HCGWN-SSLEAISAGVPMITWPLF 390 (496)
Q Consensus 345 v~v~~~~pq---------~~~l~~~~~~~~I~---HGG~g-s~~eal~~GvP~v~~P~~ 390 (496)
|.+-.|++. .+++..+++ ||. +=|+| +.+||+++|+|+|+.-..
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred EEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 344566665 346777777 653 33444 889999999999986654
No 77
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=78.46 E-value=11 Score=32.32 Aligned_cols=40 Identities=23% Similarity=0.328 Sum_probs=31.7
Q ss_pred CEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 010988 10 PHFVLFPF--LAQGHMIPMIDIGRLLAQNGAAITIVTTPANA 49 (496)
Q Consensus 10 ~~il~~~~--~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (496)
||++.+.. ++-|=..-...||..|+++|++|.++-..+..
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~ 42 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQM 42 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCC
Confidence 35555553 57999999999999999999999999765433
No 78
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=77.77 E-value=22 Score=30.69 Aligned_cols=39 Identities=10% Similarity=0.162 Sum_probs=34.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++..|++++..+.|-..-.+.+|-..+.+|++|.|+..-
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~ 65 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFI 65 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEee
Confidence 356789999999999999999999999999999999543
No 79
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=76.74 E-value=3.9 Score=39.14 Aligned_cols=47 Identities=21% Similarity=0.347 Sum_probs=37.6
Q ss_pred CCCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHH
Q 010988 8 QQPHFVLFPF-LAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTV 55 (496)
Q Consensus 8 ~~~~il~~~~-~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~ 55 (496)
++.+|+|+.. ++-|-..-..++|..|+++|++|.++..+. .+.+...
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~-~~~l~~~ 71 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP-AHSLRDI 71 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT-TCHHHHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC-CCCHHHH
Confidence 4566766665 679999999999999999999999998876 3444444
No 80
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=76.07 E-value=6.7 Score=38.12 Aligned_cols=35 Identities=9% Similarity=0.068 Sum_probs=27.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++||+++..+.. .+.+++++.+.|++|+++..+
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 57789999877654 366899999999999999654
No 81
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=76.07 E-value=5.1 Score=33.49 Aligned_cols=48 Identities=10% Similarity=0.099 Sum_probs=39.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHH
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTV 55 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~ 55 (496)
++.||++.+.++..|-....-++..|...|++|+++......+.+.+.
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~a 64 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMA 64 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 578999999999999999999999999999999988764433334333
No 82
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=75.41 E-value=3.1 Score=36.53 Aligned_cols=45 Identities=9% Similarity=0.114 Sum_probs=36.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHH
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFK 53 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 53 (496)
+++.||++...++.+-+. ...+.+.|.++| +|.++.++....++.
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~ 61 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLD 61 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCC
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcC
Confidence 456789999988888776 899999999999 999999997666544
No 83
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=75.33 E-value=21 Score=31.21 Aligned_cols=108 Identities=13% Similarity=0.003 Sum_probs=57.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGS 84 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~ 84 (496)
|.++||+++.++..+- +.+|.+.+.+. .++|..+.+..-.....+... ..++.+..++. ..+
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~-----~~gIp~~~~~~--------~~~ 68 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAE-----AAGIATQVFKR--------KDF 68 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHH-----HTTCCEEECCG--------GGS
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHH-----HcCCCEEEeCc--------ccc
Confidence 5567898887666433 55666666554 378887765321111111111 12577666531 111
Q ss_pred CcccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCeEEEe
Q 010988 85 ENFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCY-PWTVDTAARFNIPRISFH 148 (496)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~-~~a~~~A~~lgiP~v~~~ 148 (496)
.+ -+...+++.+.+++ .+||+||+-.+. .-...+...+...++.++
T Consensus 69 ~~----------------r~~~d~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiH 115 (209)
T 4ds3_A 69 AS----------------KEAHEDAILAALDV--LKPDIICLAGYMRLLSGRFIAPYEGRILNIH 115 (209)
T ss_dssp SS----------------HHHHHHHHHHHHHH--HCCSEEEESSCCSCCCHHHHGGGTTCEEEEE
T ss_pred CC----------------HHHHHHHHHHHHHh--cCCCEEEEeccccCcCHHHHhhccCCeEEEC
Confidence 00 01123466677777 699999977543 344455555655566644
No 84
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=74.79 E-value=26 Score=32.80 Aligned_cols=41 Identities=15% Similarity=0.074 Sum_probs=26.6
Q ss_pred HHHHHHHhcCCCCeEEEEcCC-CcchHHHHHhcCCCeEEEecch
Q 010988 109 PLENLLKELAPKPSCIVSDMC-YPWTVDTAARFNIPRISFHGFS 151 (496)
Q Consensus 109 ~l~~ll~~~~~~pDlVI~D~~-~~~a~~~A~~lgiP~v~~~~~~ 151 (496)
++.+.++. .+||++|+=.+ ..-...+-......++.++++.
T Consensus 72 ~~~~~l~~--~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 113 (314)
T 1fmt_A 72 ENQQLVAE--LQADVMVVVAYGLILPKAVLEMPRLGCINVHGSL 113 (314)
T ss_dssp HHHHHHHH--TTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSS
T ss_pred HHHHHHHh--cCCCEEEEeeccccCCHHHHhhccCCEEEEcCCc
Confidence 45566777 69999987644 3344555566666677776554
No 85
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=74.46 E-value=3.3 Score=40.71 Aligned_cols=37 Identities=8% Similarity=-0.071 Sum_probs=26.0
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++..||++++.+... ..+.++.++.|++|+++...
T Consensus 1 M~~~~k~l~Il~~~~~~-----~~i~~aa~~lG~~vv~v~~~ 37 (425)
T 3vot_A 1 MTKRNKNLAIICQNKHL-----PFIFEEAERLGLKVTFFYNS 37 (425)
T ss_dssp -CCCCCEEEEECCCTTC-----CHHHHHHHHTTCEEEEEEET
T ss_pred CCCCCcEEEEECCChhH-----HHHHHHHHHCCCEEEEEECC
Confidence 55778889988754332 13567778889999988665
No 86
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=73.79 E-value=3.9 Score=35.78 Aligned_cols=43 Identities=12% Similarity=-0.078 Sum_probs=33.3
Q ss_pred CCCCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeCCcch
Q 010988 6 SSQQPHFVLFPFLAQGHMIP-MIDIGRLLAQNGAAITIVTTPANA 49 (496)
Q Consensus 6 ~~~~~~il~~~~~~~GHi~p-~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (496)
..++.||++...++ +..+- ...+.+.|.++|++|.++.++...
T Consensus 2 ~l~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 2 SLKGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp CCTTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 35667998888776 45554 889999999999999999998654
No 87
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=73.35 E-value=4 Score=35.43 Aligned_cols=45 Identities=9% Similarity=0.014 Sum_probs=37.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcchhhHHHH
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQN-GAAITIVTTPANAARFKTV 55 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~r-GH~Vt~~~~~~~~~~~~~~ 55 (496)
|||++...++.|-+. ...+.+.|.++ |++|.++.++....++...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 488888888877766 89999999999 9999999999877766543
No 88
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=72.77 E-value=5.5 Score=34.29 Aligned_cols=44 Identities=16% Similarity=0.138 Sum_probs=37.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHH
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKT 54 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~ 54 (496)
.||++...++.|-+ =...+.+.|.++|++|.++.++....++..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 58999888888855 578899999999999999999977766654
No 89
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=71.89 E-value=6.4 Score=32.03 Aligned_cols=46 Identities=13% Similarity=0.125 Sum_probs=33.9
Q ss_pred CCCEEEEEc-CCC-ccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHH
Q 010988 8 QQPHFVLFP-FLA-QGHMIPMIDIGRLLAQNGAAITIVTTPANAARFK 53 (496)
Q Consensus 8 ~~~~il~~~-~~~-~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 53 (496)
+.||++++- .|- ...+--.+=++..|.++||+|+++.++.....++
T Consensus 5 ~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLle 52 (157)
T 1kjn_A 5 STGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQ 52 (157)
T ss_dssp -CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred cceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhee
Confidence 346766554 354 6666678888999999999999999996555443
No 90
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=71.88 E-value=9.7 Score=33.23 Aligned_cols=50 Identities=16% Similarity=0.120 Sum_probs=41.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHH
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVA 57 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~ 57 (496)
+..+|++.+.++..|-....-++..|..+|++|.++....-.+.+.+...
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~ 136 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVK 136 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
Confidence 45689999999999999999999999999999999887655554544443
No 91
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=71.83 E-value=3 Score=39.41 Aligned_cols=45 Identities=16% Similarity=0.170 Sum_probs=35.6
Q ss_pred CEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHH
Q 010988 10 PHFVLFPF-LAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTV 55 (496)
Q Consensus 10 ~~il~~~~-~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~ 55 (496)
.+|+|+.. ++-|-..-..+||..|+++|++|.++-.+. ...+...
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~-~~~l~~~ 59 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP-AHSLSDS 59 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS-SCCHHHH
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC-CcCHHHH
Confidence 45655554 679999999999999999999999998876 4444443
No 92
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=71.78 E-value=2.3 Score=40.38 Aligned_cols=41 Identities=15% Similarity=0.142 Sum_probs=30.0
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeCC
Q 010988 1 MASEGSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGA-AITIVTTP 46 (496)
Q Consensus 1 m~~~~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH-~Vt~~~~~ 46 (496)
||+.|.+++|||.++-. |++--. +|..|+..|| +|+++-..
T Consensus 1 ~~~~~~~~~~kI~VIGa---G~vG~~--lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 1 MAPALVQRRKKVAMIGS---GMIGGT--MGYLCALRELADVVLYDVV 42 (331)
T ss_dssp --CCCCSCCCEEEEECC---SHHHHH--HHHHHHHHTCCEEEEECSS
T ss_pred CCcCcCCCCCEEEEECC---CHHHHH--HHHHHHhCCCCeEEEEECC
Confidence 88888888899998865 444433 8899999999 98877554
No 93
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=71.38 E-value=49 Score=28.77 Aligned_cols=106 Identities=11% Similarity=0.013 Sum_probs=56.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCcc
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSENF 87 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~~ 87 (496)
+||+++.++..+- +.+|.+.+.+. +|+|..+.+............. .++.+..++ +..+.+
T Consensus 1 ~riaVl~SG~Gs~---L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~-----~gIp~~~~~--------~~~~~~- 63 (209)
T 1meo_A 1 ARVAVLISGTGSN---LQALIDSTREPNSSAQIDIVISNKAAVAGLDKAER-----AGIPTRVIN--------HKLYKN- 63 (209)
T ss_dssp CEEEEEESSSCTT---HHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHH-----TTCCEEECC--------GGGSSS-
T ss_pred CeEEEEEECCchH---HHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHH-----cCCCEEEEC--------ccccCc-
Confidence 3788877766544 44455555554 7999877655433222222221 256665543 111100
Q ss_pred cCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCeEEEec
Q 010988 88 DMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCY-PWTVDTAARFNIPRISFHG 149 (496)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~-~~a~~~A~~lgiP~v~~~~ 149 (496)
-+.+.+.+.+.++. .+||+||+-.+. .-...+...+...++.+++
T Consensus 64 ---------------r~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 109 (209)
T 1meo_A 64 ---------------RVEFDSAIDLVLEE--FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHP 109 (209)
T ss_dssp ---------------HHHHHHHHHHHHHH--TTCCEEEEESCCSCCCHHHHHHTTTSEEEEES
T ss_pred ---------------hhhhhHHHHHHHHh--cCCCEEEEcchhhhCCHHHHhhhcCCEEEEcc
Confidence 01123456677777 799999876443 3444555666666666543
No 94
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=70.22 E-value=5.8 Score=33.66 Aligned_cols=45 Identities=2% Similarity=-0.048 Sum_probs=36.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHH
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTV 55 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~ 55 (496)
+||++...++.|=+. ...+.+.|.++|++|.++.++....++...
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~~~ 50 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFINGE 50 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSCHH
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhhHH
Confidence 588888877766665 889999999999999999999877766543
No 95
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=68.96 E-value=11 Score=34.06 Aligned_cols=61 Identities=15% Similarity=0.049 Sum_probs=44.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEee
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQ 72 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~ 72 (496)
.+..+|++.+.++..|-....-++..|..+|++|+++....-.+.+....... +...+.+.
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~-----~~d~V~lS 181 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKE-----KPIMLTGT 181 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHH-----CCSEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHc-----CCCEEEEE
Confidence 34679999999999999999999999999999999886543333333333322 35555553
No 96
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=67.36 E-value=32 Score=30.13 Aligned_cols=104 Identities=8% Similarity=0.056 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSE 85 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~ 85 (496)
+++||+++.++..+- +.+|.+++.+. +++|..+.+..-.....+... ..++.+..++ +..+.
T Consensus 7 ~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~-----~~gIp~~~~~--------~~~~~ 70 (215)
T 3kcq_A 7 KELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQ-----SYGIPTFVVK--------RKPLD 70 (215)
T ss_dssp CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHH-----HTTCCEEECC--------BTTBC
T ss_pred CCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHH-----HcCCCEEEeC--------cccCC
Confidence 456888887665433 55666666554 378887765321111111111 1257666553 11110
Q ss_pred cccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCeEEEecc
Q 010988 86 NFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCY-PWTVDTAARFNIPRISFHGF 150 (496)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~-~~a~~~A~~lgiP~v~~~~~ 150 (496)
.+++.+.+++ .+||+||+-.+. .-...+.+.+...++.++++
T Consensus 71 ---------------------~~~~~~~L~~--~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 71 ---------------------IEHISTVLRE--HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp ---------------------HHHHHHHHHH--TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---------------------hHHHHHHHHH--hCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 0466677777 799999977543 34455556666666665433
No 97
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=66.24 E-value=30 Score=30.30 Aligned_cols=107 Identities=11% Similarity=0.092 Sum_probs=56.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQ-NGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSE 85 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~-rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~ 85 (496)
..|+||+++.++..+- +.+|.++..+ .+++|..+.+..... ..+.... .++.+..++.. .+.
T Consensus 10 ~~~~ri~vl~SG~gsn---l~all~~~~~~~~~eI~~Vis~~~a~-~~~~A~~-----~gIp~~~~~~~--------~~~ 72 (215)
T 3da8_A 10 SAPARLVVLASGTGSL---LRSLLDAAVGDYPARVVAVGVDRECR-AAEIAAE-----ASVPVFTVRLA--------DHP 72 (215)
T ss_dssp CSSEEEEEEESSCCHH---HHHHHHHSSTTCSEEEEEEEESSCCH-HHHHHHH-----TTCCEEECCGG--------GSS
T ss_pred CCCcEEEEEEeCChHH---HHHHHHHHhccCCCeEEEEEeCCchH-HHHHHHH-----cCCCEEEeCcc--------ccc
Confidence 4577999988776443 3444445433 246887776554322 2222111 25666554310 000
Q ss_pred cccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCC-CcchHHHHHhcCCCeEEEe
Q 010988 86 NFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMC-YPWTVDTAARFNIPRISFH 148 (496)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~-~~~a~~~A~~lgiP~v~~~ 148 (496)
. -+...+++.+.++. .+||+||+-.+ ..-...+.+.+...++.++
T Consensus 73 ------~----------r~~~d~~~~~~l~~--~~~Dlivlagy~~iL~~~~l~~~~~~~iNiH 118 (215)
T 3da8_A 73 ------S----------RDAWDVAITAATAA--HEPDLVVSAGFMRILGPQFLSRFYGRTLNTH 118 (215)
T ss_dssp ------S----------HHHHHHHHHHHHHT--TCCSEEEEEECCSCCCHHHHHHHTTTEEEEE
T ss_pred ------c----------hhhhhHHHHHHHHh--hCCCEEEEcCchhhCCHHHHhhccCCeEEeC
Confidence 0 01124567777888 79999987643 3344445555555556544
No 98
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=65.90 E-value=31 Score=30.82 Aligned_cols=36 Identities=19% Similarity=0.153 Sum_probs=23.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
+++|+++.-.-.--..-+-.....++++|++|++++
T Consensus 3 ~~~vL~v~aHPDDe~l~~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 3 GLHILAFGAHADDVEIGMAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp CCSEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CccEEEEEeCCChHHHhHHHHHHHHHHCCCeEEEEE
Confidence 457766654333334455556667778999998885
No 99
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=65.56 E-value=12 Score=30.00 Aligned_cols=47 Identities=4% Similarity=-0.046 Sum_probs=34.3
Q ss_pred CCCEEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHH
Q 010988 8 QQPHFVLFPFLA---QGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKT 54 (496)
Q Consensus 8 ~~~~il~~~~~~---~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~ 54 (496)
.+.|++|+...+ .......+.+|...++.||+|+++........+.+
T Consensus 14 ~~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l~k 63 (134)
T 3mc3_A 14 QXXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLLDX 63 (134)
T ss_dssp CCCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGGBH
T ss_pred ccceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHHhh
Confidence 356776665533 56677888899999999999999988765554443
No 100
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=65.16 E-value=7.2 Score=34.56 Aligned_cols=157 Identities=11% Similarity=0.017 Sum_probs=78.1
Q ss_pred ccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcc
Q 010988 272 LNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWA 351 (496)
Q Consensus 272 ~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~ 351 (496)
.-|++-. .++++.|+.|... ...++.|.+.+.++.++..... .++.+ + ....++.+..-.
T Consensus 24 Pifl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~~---~~l~~--l-------~~~~~i~~i~~~ 83 (223)
T 3dfz_A 24 TVMLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTVS---AEINE--W-------EAKGQLRVKRKK 83 (223)
T ss_dssp EEEECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSCC---HHHHH--H-------HHTTSCEEECSC
T ss_pred ccEEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCCC---HHHHH--H-------HHcCCcEEEECC
Confidence 3455554 4568888887643 2344555566888776543221 12222 1 113344433222
Q ss_pred hhhhhhccccccccccCCChhhHHHHHHhCCcEeccCC-ccccchhH-----HHHHHHhhceEEecccCCCCCCcccccc
Q 010988 352 PQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPL-FGDQFCNE-----KLIVQVLNIGVRIGVEVPLDFGEEEEIG 425 (496)
Q Consensus 352 pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~-~~DQ~~na-----~r~~e~~G~g~~l~~~~~~~~~~~~~~~ 425 (496)
-....|..+++ +|.--|.-.+.+.++.-.- ..+|+ -.|.+..+ ..+ ++-++-+.+..+ +++
T Consensus 84 ~~~~dL~~adL--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv-~rg~l~iaIST~---------G~s 150 (223)
T 3dfz_A 84 VGEEDLLNVFF--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQF-SRGRLSLAISTD---------GAS 150 (223)
T ss_dssp CCGGGSSSCSE--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEE-EETTEEEEEECT---------TSC
T ss_pred CCHhHhCCCCE--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEE-EeCCEEEEEECC---------CCC
Confidence 23344555555 8888787666655554222 23332 23433322 222 232334444333 122
Q ss_pred cccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHH
Q 010988 426 VLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRA 464 (496)
Q Consensus 426 ~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a 464 (496)
-.-+..|++.|.++|. .....+-+.+.++++.+++.
T Consensus 151 -P~la~~iR~~ie~~lp--~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 151 -PLLTKRIKEDLSSNYD--ESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp -HHHHHHHHHHHHHHSC--THHHHHHHHHHHHHHHHHHC
T ss_pred -cHHHHHHHHHHHHHcc--HHHHHHHHHHHHHHHHHHHH
Confidence 2345568888888883 33446777778888777643
No 101
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=64.79 E-value=5.7 Score=32.54 Aligned_cols=34 Identities=21% Similarity=0.388 Sum_probs=26.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+..||+++.. |++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 4568888843 5554 68899999999999999875
No 102
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=64.68 E-value=14 Score=32.53 Aligned_cols=49 Identities=14% Similarity=0.022 Sum_probs=39.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHH
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTV 55 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~ 55 (496)
.++.||++.+.++..|-....-++..|..+|++|+.+....-.+.+.+.
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~ 138 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEE 138 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHH
Confidence 4568999999999999999999999999999999998775444444343
No 103
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=64.52 E-value=6.1 Score=34.56 Aligned_cols=48 Identities=13% Similarity=0.043 Sum_probs=35.4
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcchhhHH
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQ-NGAAITIVTTPANAARFK 53 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~-rGH~Vt~~~~~~~~~~~~ 53 (496)
|++++.||++...++.+=+. ...+.+.|.+ +|++|.++.++....++.
T Consensus 15 ~~l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~ 63 (206)
T 1qzu_A 15 LMERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYS 63 (206)
T ss_dssp -CCSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSC
T ss_pred cccCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhC
Confidence 34556788888878777554 5899999999 899999999997665543
No 104
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=64.36 E-value=8.7 Score=32.95 Aligned_cols=41 Identities=24% Similarity=0.377 Sum_probs=27.9
Q ss_pred CCCCCEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeCC
Q 010988 6 SSQQPHFVLFPFLAQGHMIPMI-DIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 6 ~~~~~~il~~~~~~~GHi~p~l-~LA~~L~~rGH~Vt~~~~~ 46 (496)
+|.||||+++-....|+..-+. .+++.|.+.|++|.++-..
T Consensus 2 ~M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 2 SMSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp ---CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CCCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 4667899887765578766554 4567777789999888655
No 105
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=63.46 E-value=4.9 Score=37.43 Aligned_cols=38 Identities=16% Similarity=0.175 Sum_probs=29.1
Q ss_pred CCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 4 EGSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 4 ~~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|+++++||.|+-.+..|+ .+|..|+++||+|+++...
T Consensus 10 ~~~~~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 10 AKKIIVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp --CCCCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred cccccCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 4556778999998776775 5888999999999987654
No 106
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=63.15 E-value=16 Score=36.30 Aligned_cols=119 Identities=14% Similarity=0.171 Sum_probs=60.5
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCC
Q 010988 1 MASEGSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGI 80 (496)
Q Consensus 1 m~~~~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l 80 (496)
|+-.+.+.++|-+|++. ++=.-++.+|+.|.+.|++|. .+......+++. ++.+..+. ...++
T Consensus 1 ~~~~~~~~~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~---~vTgf 63 (523)
T 3zzm_A 1 MSTDDGRRPIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT---------GIPVTPVE---QLTGF 63 (523)
T ss_dssp ---CCCCCCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT---------TCCCEEHH---HHHSC
T ss_pred CCcccccccccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc---------CCceeecc---ccCCC
Confidence 33333455566566655 345568899999999999886 555444445442 56665553 11345
Q ss_pred CCCCCcccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHH
Q 010988 81 PEGSENFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYPWTVDTAA 138 (496)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~ 138 (496)
|+....--..-.......++..- .....+.++-+.--...|+||++ +++.-..++.
T Consensus 64 PEil~GRVKTLHP~ihgGiLa~r-~~~~h~~~l~~~~i~~iDlVvvN-LYPF~~tv~~ 119 (523)
T 3zzm_A 64 PEVLDGRVKTLHPRVHAGLLADL-RKSEHAAALEQLGIEAFELVVVN-LYPFSQTVES 119 (523)
T ss_dssp CCCTTTTSSSCSHHHHHHHHCCT-TSHHHHHHHHHHTCCCCSEEEEE-CCCHHHHHHT
T ss_pred chhhCCccccCCchhhhhhccCC-CCHHHHHHHHHCCCCceeEEEEe-CCChHHHHhc
Confidence 55433221111123333222211 11222222222212688999999 6665555553
No 107
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=62.41 E-value=53 Score=30.44 Aligned_cols=40 Identities=13% Similarity=0.001 Sum_probs=26.0
Q ss_pred HHHHHHHhcCCCCeEEEEcCC-CcchHHHHHhcCCCeEEEecc
Q 010988 109 PLENLLKELAPKPSCIVSDMC-YPWTVDTAARFNIPRISFHGF 150 (496)
Q Consensus 109 ~l~~ll~~~~~~pDlVI~D~~-~~~a~~~A~~lgiP~v~~~~~ 150 (496)
++.+.++. .+||++|+-.+ ..-...+-......++.++++
T Consensus 66 ~~~~~l~~--~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 66 LWVERIAQ--LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp HHHHHHHH--TCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHh--cCCCEEEEeccccccCHHHHhcCcCCEEEecCC
Confidence 34556677 69999997644 334455555666667777665
No 108
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=61.98 E-value=45 Score=28.13 Aligned_cols=101 Identities=16% Similarity=0.068 Sum_probs=52.7
Q ss_pred hhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEe
Q 010988 269 SECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILIL 348 (496)
Q Consensus 269 ~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~ 348 (496)
.++-++|..++ ..+||.|.... ......++..+.+-++|=+++... . + ++.. .-...++.
T Consensus 35 ~~lg~~La~~g---~~lVsGGg~~G----im~aa~~gAl~~gG~tigVlP~~~-~-----~--~~~~-----~~~~~i~~ 94 (176)
T 2iz6_A 35 NELGKQIATHG---WILLTGGRSLG----VMHEAMKGAKEAGGTTIGVLPGPD-T-----S--EISD-----AVDIPIVT 94 (176)
T ss_dssp HHHHHHHHHTT---CEEEEECSSSS----HHHHHHHHHHHTTCCEEEEECC-------------CCT-----TCSEEEEC
T ss_pred HHHHHHHHHCC---CEEEECCCccC----HhHHHHHHHHHcCCEEEEEeCchh-h-----h--hhcc-----CCceeEEc
Confidence 44555665442 56666666222 333444444445556666554321 0 0 1110 01124455
Q ss_pred Ccchh-hhhhc-cccccccccCCChhhHHH---HHHhCCcEeccCCc
Q 010988 349 GWAPQ-VLILS-HPSIGGFLTHCGWNSSLE---AISAGVPMITWPLF 390 (496)
Q Consensus 349 ~~~pq-~~~l~-~~~~~~~I~HGG~gs~~e---al~~GvP~v~~P~~ 390 (496)
++.+. +.++. .+++ .++-=||.||+.| ++.+++|++++|.+
T Consensus 95 ~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 95 GLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp CCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred CCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 55554 33333 3333 4566789998664 57799999999983
No 109
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=61.47 E-value=11 Score=30.45 Aligned_cols=43 Identities=9% Similarity=0.108 Sum_probs=29.3
Q ss_pred CCCCEEEEEcCCC-ccCHHH--HHHHHHHHHhCCCeEEEEeCCcch
Q 010988 7 SQQPHFVLFPFLA-QGHMIP--MIDIGRLLAQNGAAITIVTTPANA 49 (496)
Q Consensus 7 ~~~~~il~~~~~~-~GHi~p--~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (496)
..|.|++|+-..+ +|+... .+.+|..+...||+|.++......
T Consensus 3 ~~Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV 48 (136)
T 2hy5_B 3 EVVKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGV 48 (136)
T ss_dssp --CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGG
T ss_pred cchhEEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHH
Confidence 4444676665543 776444 577799999999999999877544
No 110
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=61.42 E-value=7.3 Score=35.91 Aligned_cols=33 Identities=18% Similarity=0.289 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|||++.- +.|-+- ..|+++|.++||+|+.++-.
T Consensus 1 MkILVTG--atGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVGG--GTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 6877664 444444 45789999999999998754
No 111
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=60.94 E-value=40 Score=29.70 Aligned_cols=36 Identities=6% Similarity=-0.061 Sum_probs=22.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
|++|+++.-.-.--..-+-.....++++|++|++++
T Consensus 1 m~~vL~v~aHPDDe~l~~ggtia~~~~~G~~v~vv~ 36 (227)
T 1uan_A 1 MLDLLVVAPHPDDGELGCGGTLARAKAEGLSTGILD 36 (227)
T ss_dssp CEEEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CceEEEEEeCCCcHHHhHHHHHHHHHhCCCcEEEEE
Confidence 457766653333334445555566678999988774
No 112
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=60.57 E-value=70 Score=29.77 Aligned_cols=34 Identities=15% Similarity=-0.006 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
.|||+|+..+..+- ...++|.++||+|..+.+.+
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~p 35 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYTQP 35 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHHSSSEEEEEECCC
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEeCC
Confidence 36999998876553 44678888999998887754
No 113
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=60.55 E-value=13 Score=34.16 Aligned_cols=42 Identities=14% Similarity=-0.024 Sum_probs=25.5
Q ss_pred CCCCCCCEEEEEc-CCCccCHHHH--HHHHHHHHhCCCeEEEEeC
Q 010988 4 EGSSQQPHFVLFP-FLAQGHMIPM--IDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 4 ~~~~~~~~il~~~-~~~~GHi~p~--l~LA~~L~~rGH~Vt~~~~ 45 (496)
.+.|+.||||++- .|-...++-. -.+.+.|.++||+|++.--
T Consensus 17 ~~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 17 NLYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp -----CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred cchhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 3457889987765 3544444442 3467888899999998744
No 114
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=60.45 E-value=85 Score=27.27 Aligned_cols=106 Identities=11% Similarity=0.091 Sum_probs=57.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCc
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSEN 86 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~ 86 (496)
|+||+++.++. | ..+.+|.+...+. ..+|..+.+..-...+.+... ..++.+..++ +..+.+
T Consensus 2 m~riavl~Sg~-G--snl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~-----~~gIp~~~~~--------~~~~~~ 65 (211)
T 3p9x_A 2 MKRVAIFASGS-G--TNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVK-----VHEIPVCALD--------PKTYPS 65 (211)
T ss_dssp -CEEEEECCTT-C--HHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHH-----TTTCCEEECC--------GGGSSS
T ss_pred CCEEEEEEeCC-c--hHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHH-----HcCCCEEEeC--------hhhcCc
Confidence 67999888775 4 3466666665443 257877765422222222222 2356665543 111100
Q ss_pred ccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCeEEEe
Q 010988 87 FDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCY-PWTVDTAARFNIPRISFH 148 (496)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~-~~a~~~A~~lgiP~v~~~ 148 (496)
-+....++.+.+++ .+||+||+-.+. .-...+...+...++.++
T Consensus 66 ----------------r~~~d~~~~~~l~~--~~~Dliv~agy~~Il~~~~l~~~~~~~iNiH 110 (211)
T 3p9x_A 66 ----------------KEAYEIEVVQQLKE--KQIDFVVLAGYMRLVGPTLLGAYEGRIVNIH 110 (211)
T ss_dssp ----------------HHHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHHHHTTSEEEEE
T ss_pred ----------------hhhhHHHHHHHHHh--cCCCEEEEeCchhhcCHHHHhhccCCeEEEC
Confidence 11124466677777 799999977543 344445555555566544
No 115
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=59.93 E-value=5.9 Score=37.98 Aligned_cols=37 Identities=11% Similarity=0.140 Sum_probs=29.4
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|++++|||.|+-.+..| ..+|..|+++||+|++....
T Consensus 25 m~~~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp --CCCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred ccccCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 55667899999877776 46899999999999998765
No 116
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=59.39 E-value=5.9 Score=34.28 Aligned_cols=47 Identities=6% Similarity=-0.083 Sum_probs=37.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHH
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTV 55 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~ 55 (496)
++.||++...++.|=+. ...+.+.|.++|++|.++.++....++...
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~ 53 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIPAH 53 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSCHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHHHH
Confidence 45688888878777665 789999999999999999998766665543
No 117
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=59.34 E-value=9.1 Score=36.06 Aligned_cols=35 Identities=9% Similarity=0.082 Sum_probs=29.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
..++||.|+-.++.| +..+|+.|+++||+|+..=.
T Consensus 2 ~~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 2 NAMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp -CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 457899999998877 66799999999999998744
No 118
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=59.20 E-value=2.7 Score=44.72 Aligned_cols=116 Identities=9% Similarity=0.038 Sum_probs=75.1
Q ss_pred EeCcchhhhhhccccccccccCCChhhHHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEecccCCCCCCccccccc
Q 010988 347 ILGWAPQVLILSHPSIGGFLTHCGWNSSLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGV 426 (496)
Q Consensus 347 v~~~~pq~~~l~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~ 426 (496)
+.++.+-.++|..+++ +||=- ...+.|.+..++|+|....-.|++.+. ..|. ..+..+ +-+- ..
T Consensus 603 ~~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~-----~rg~--y~d~~~---~~pg---~~ 666 (729)
T 3l7i_A 603 VSNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG-----LRGF--YMNYME---DLPG---PI 666 (729)
T ss_dssp CTTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS-----CCSB--SSCTTS---SSSS---CE
T ss_pred CCCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc-----cCCc--ccChhH---hCCC---Ce
Confidence 4556677788888887 99863 456779999999999998887777541 1232 222210 0000 01
Q ss_pred ccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHH
Q 010988 427 LVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSSSLMIKLLIQDI 482 (496)
Q Consensus 427 ~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 482 (496)
..+.++|.++|.....+. +.++++.+++.+.+... +.|.++.+.++.++...
T Consensus 667 ~~~~~eL~~~i~~~~~~~---~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 667 YTEPYGLAKELKNLDKVQ---QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDI 718 (729)
T ss_dssp ESSHHHHHHHHTTHHHHH---HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHhhhhccc---hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcC
Confidence 467889999998876532 26777777888877654 55666666666555554
No 119
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=58.95 E-value=11 Score=34.76 Aligned_cols=41 Identities=10% Similarity=0.144 Sum_probs=32.1
Q ss_pred CCCCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 7 SQQPHFVLFPF--LAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 7 ~~~~~il~~~~--~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|+|+|++.+.. ++-|=..-...||..|+++|++|.++=...
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 34677776665 579999999999999999999999886554
No 120
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=58.93 E-value=16 Score=32.10 Aligned_cols=109 Identities=15% Similarity=0.139 Sum_probs=62.2
Q ss_pred CCEEEEEcCCCccCHHH----HHHHHHHHHhC-CCeEEEEeCCcc-hhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCC
Q 010988 9 QPHFVLFPFLAQGHMIP----MIDIGRLLAQN-GAAITIVTTPAN-AARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPE 82 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p----~l~LA~~L~~r-GH~Vt~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~ 82 (496)
|.+|+++.-...|.++| ++.-|++|++. |-+|+.++.... .+.++.. ..+ |. =+.+.+..+ .+ .
T Consensus 3 m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~-~~~---Ga-d~v~~v~~~----~~-~ 72 (217)
T 3ih5_A 3 ANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQI-LPY---GV-DKLHVFDAE----GL-Y 72 (217)
T ss_dssp CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHH-GGG---TC-SEEEEEECG----GG-S
T ss_pred cccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHH-Hhc---CC-CEEEEecCc----cc-c
Confidence 45788888776777666 57778888875 777877654332 2223222 111 21 122333200 00 0
Q ss_pred CCCcccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCc---chHHHHHhcCCCeEE
Q 010988 83 GSENFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYP---WTVDTAARFNIPRIS 146 (496)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~---~a~~~A~~lgiP~v~ 146 (496)
.+. .+.....+.++++. .+||+||+-.... -++.+|..+++|.++
T Consensus 73 ~~~-----------------~~~~a~~l~~~i~~--~~p~~Vl~g~t~~G~~laprlAa~L~~~~~s 120 (217)
T 3ih5_A 73 PYT-----------------SLPHTSILVNLFKE--EQPQICLMGATVIGRDLGPRVSSALTSGLTA 120 (217)
T ss_dssp SCC-----------------HHHHHHHHHHHHHH--HCCSEEEEECSHHHHHHHHHHHHHTTCCCBC
T ss_pred cCC-----------------HHHHHHHHHHHHHh--cCCCEEEEeCCcchhhHHHHHHHHhCCCccc
Confidence 000 01123345556666 5899999886444 456788999999987
No 121
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=58.79 E-value=5.7 Score=37.63 Aligned_cols=34 Identities=24% Similarity=0.231 Sum_probs=28.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++|||+|+-.+..| ..+|..|+++||+|+++...
T Consensus 2 ~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 2 SLTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 46899999877766 45789999999999999864
No 122
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=58.18 E-value=6.4 Score=31.63 Aligned_cols=34 Identities=12% Similarity=0.178 Sum_probs=25.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+|+||+++.. |.+ -..+|+.|.++||+|+++...
T Consensus 5 ~~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 4568888765 443 357899999999999988764
No 123
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=57.92 E-value=32 Score=30.74 Aligned_cols=42 Identities=19% Similarity=0.029 Sum_probs=26.6
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 1 MASEGSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 1 m~~~~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|...|+++..+ ++++..+ |-+- ..+|++|+++|++|+++.-.
T Consensus 1 m~~~~~l~~k~-vlVTGas-~giG--~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 1 MAGRWNLEGCT-ALVTGGS-RGIG--YGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp -CCTTCCTTCE-EEEESCS-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCccCCCCCE-EEEECCC-cHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 66665555444 4555333 3222 47899999999999987654
No 124
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=57.49 E-value=14 Score=32.66 Aligned_cols=40 Identities=10% Similarity=0.084 Sum_probs=35.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
-+++|++..-|+-|-..-++.+|..|+++|++|.++..+.
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3678888888999999999999999999999998887654
No 125
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=57.43 E-value=18 Score=27.64 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=30.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+|+||+++|..+.|--.-.-.+-+.+.++|.++.+-..+
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 4567999999987555566668888899999998776544
No 126
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=57.21 E-value=9.5 Score=34.53 Aligned_cols=44 Identities=18% Similarity=0.193 Sum_probs=36.6
Q ss_pred CCCCEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 010988 7 SQQPHFVLFPFL---AQGHMIPMIDIGRLLAQNGAAITIVTTPANAA 50 (496)
Q Consensus 7 ~~~~~il~~~~~---~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (496)
|+.||.+|++.+ +.|-=.-...|+..|..||++||+.=.++|.+
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccccee
Confidence 578899999976 37777889999999999999999997766654
No 127
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=55.49 E-value=16 Score=28.58 Aligned_cols=45 Identities=11% Similarity=0.016 Sum_probs=32.5
Q ss_pred CCCCCCEEEEEcCCC-ccCH-HHHHHHHHHHHhCC--CeEEEEeCCcchh
Q 010988 5 GSSQQPHFVLFPFLA-QGHM-IPMIDIGRLLAQNG--AAITIVTTPANAA 50 (496)
Q Consensus 5 ~~~~~~~il~~~~~~-~GHi-~p~l~LA~~L~~rG--H~Vt~~~~~~~~~ 50 (496)
||.+ +|++|+-+-. .-.. +..+..|....++| |+|.++...+...
T Consensus 4 ~~~~-~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 4 MSAN-DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVK 52 (117)
T ss_dssp SSTT-SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHH
T ss_pred cccC-CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeee
Confidence 4455 7887777654 3332 45788899999999 8999998885444
No 128
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=55.34 E-value=8.6 Score=32.79 Aligned_cols=43 Identities=9% Similarity=0.073 Sum_probs=34.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHH
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFK 53 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 53 (496)
.||++...++.|=+ =...+.+.|.++|++|.++.++....++.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 45 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFIN 45 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSC
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 37777777776655 57899999999999999999997665553
No 129
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=55.24 E-value=8 Score=35.89 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=25.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.||||+|+-.+..| ..+|..|+++||+|+++...
T Consensus 2 ~~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 2 NAMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEECC
Confidence 36799999766565 35789999999999988653
No 130
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=54.52 E-value=14 Score=32.06 Aligned_cols=37 Identities=14% Similarity=0.121 Sum_probs=25.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHH-hCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLA-QNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~-~rGH~Vt~~~~~ 46 (496)
..|||.++++. +.|-+- ..++++|+ ++||+|+.+.-.
T Consensus 2 ~~mmk~vlVtG-asg~iG--~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 2 NAMYXYITILG-AAGQIA--QXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CCSCSEEEEES-TTSHHH--HHHHHHHHHHCCCEEEEEESS
T ss_pred CceEEEEEEEe-CCcHHH--HHHHHHHHhcCCceEEEEecC
Confidence 34677555553 333332 57899999 899999988765
No 131
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=54.23 E-value=14 Score=34.68 Aligned_cols=35 Identities=14% Similarity=0.246 Sum_probs=28.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.++|||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 356899999877777 66889999999999987543
No 132
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=53.68 E-value=20 Score=27.44 Aligned_cols=41 Identities=7% Similarity=0.128 Sum_probs=29.9
Q ss_pred CEEEEEcCCC---ccCHHHHHHHHHHHHhC-CC-eEEEEeCCcchh
Q 010988 10 PHFVLFPFLA---QGHMIPMIDIGRLLAQN-GA-AITIVTTPANAA 50 (496)
Q Consensus 10 ~~il~~~~~~---~GHi~p~l~LA~~L~~r-GH-~Vt~~~~~~~~~ 50 (496)
+|++|+-..+ .......+.+|..+.+. || +|+++.......
T Consensus 2 ~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~ 47 (117)
T 1jx7_A 2 QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVT 47 (117)
T ss_dssp CEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGG
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHH
Confidence 4666555433 34566779999999999 99 999998875443
No 133
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=53.59 E-value=7.3 Score=35.61 Aligned_cols=35 Identities=14% Similarity=0.295 Sum_probs=25.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+||||++.. + |-+- ..|++.|.++||+|+.+.-.
T Consensus 1 M~~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAG--C-GDLG--LELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEEC--C-SHHH--HHHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEEC--C-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3467888774 4 6443 46789999999999998765
No 134
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=52.70 E-value=9.9 Score=33.87 Aligned_cols=35 Identities=14% Similarity=0.222 Sum_probs=28.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.++|||.|+-.+..|- .||+.|+++||+|+.+..+
T Consensus 4 ~~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 4578999999888774 5899999999999976553
No 135
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=51.96 E-value=22 Score=31.91 Aligned_cols=39 Identities=8% Similarity=0.146 Sum_probs=28.0
Q ss_pred CCCEEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQG-----------HMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~G-----------Hi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|+||+++.....+ ...=+......|.+.|++|+++++.
T Consensus 2 ~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 2 TPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp -CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36789888765322 1234677788899999999999875
No 136
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=51.83 E-value=29 Score=31.12 Aligned_cols=38 Identities=13% Similarity=0.088 Sum_probs=28.7
Q ss_pred CCEEEEEcCCCc----------cC-HHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQ----------GH-MIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~----------GH-i~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|.||+++..... |- ..=++.-...|.+.|++|+++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 678988876532 22 444777788999999999999975
No 137
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=51.74 E-value=5.1 Score=37.37 Aligned_cols=36 Identities=19% Similarity=0.282 Sum_probs=26.5
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhC-----C-CeEEEEeC
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQN-----G-AAITIVTT 45 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~r-----G-H~Vt~~~~ 45 (496)
|+..+|||.|+-.+..|. .+|..|+++ | |+|+++..
T Consensus 4 m~~~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 445668999997776663 568888888 9 99998865
No 138
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=51.65 E-value=1e+02 Score=29.91 Aligned_cols=36 Identities=17% Similarity=0.041 Sum_probs=26.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPAN 48 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~ 48 (496)
+++||+++..+ .-...+++++.+.||+|+.+.....
T Consensus 18 ~~~~ili~g~g-----~~g~~~~~a~~~~G~~v~~v~~~~~ 53 (433)
T 2dwc_A 18 SAQKILLLGSG-----ELGKEIAIEAQRLGVEVVAVDRYAN 53 (433)
T ss_dssp TCCEEEEESCS-----HHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEECCCC
Confidence 45789998543 2346778999999999998876543
No 139
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=51.62 E-value=7.7 Score=34.14 Aligned_cols=35 Identities=9% Similarity=0.105 Sum_probs=27.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+||||.|+-.+..| ..+|+.|++.||+|+++...
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECTT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 568999999755555 46889999999999985543
No 140
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=51.29 E-value=16 Score=33.08 Aligned_cols=42 Identities=12% Similarity=0.071 Sum_probs=29.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAA 50 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (496)
+++||||+.-==+. +---+..|+++|.+ +|+|+++++...+.
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCT
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCc
Confidence 46799887753332 33447888999977 89999999987665
No 141
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=51.12 E-value=6.8 Score=37.55 Aligned_cols=35 Identities=14% Similarity=0.101 Sum_probs=27.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+|+||.|+-.+..| ..+|..|+++||+|+++...
T Consensus 13 m~M~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 13 LYLNKAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp CCEEEEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred hccCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 445599999877666 46789999999999988654
No 142
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=51.07 E-value=13 Score=33.38 Aligned_cols=41 Identities=15% Similarity=0.193 Sum_probs=32.1
Q ss_pred CCCCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 7 SQQPHFVLFPF--LAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 7 ~~~~~il~~~~--~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
.+++|++.+.. ++-|-..=...||..|+++|++|.++=...
T Consensus 3 ~~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 3 RAKVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp --CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 55677766654 568899999999999999999999986554
No 143
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=50.68 E-value=11 Score=35.86 Aligned_cols=35 Identities=11% Similarity=0.174 Sum_probs=25.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|++|||+|+-.+..| ..+|..|+++||+|+++...
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 456899999766555 34788899999999988543
No 144
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=50.67 E-value=35 Score=30.66 Aligned_cols=32 Identities=3% Similarity=-0.003 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
|+++++.++.| + =.++|+.|+++|++|+++..
T Consensus 12 k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 12 KVIVIAGGIKN-L--GALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp CEEEEETCSSH-H--HHHHHHHHTTSSCEEEEEES
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCEEEEEec
Confidence 67777755533 3 26789999999999998764
No 145
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=49.69 E-value=21 Score=28.97 Aligned_cols=44 Identities=11% Similarity=0.110 Sum_probs=34.6
Q ss_pred EEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHH
Q 010988 11 HFVLFPF-LAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKT 54 (496)
Q Consensus 11 ~il~~~~-~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~ 54 (496)
|++|+.. +..-.+.+.+.+|...+..|++|+++.+......+.+
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc
Confidence 5555544 5588899999999999999999999999866655544
No 146
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=49.57 E-value=11 Score=29.86 Aligned_cols=33 Identities=12% Similarity=0.256 Sum_probs=24.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|||+++-. |.+-. .+++.|.++||+|+++...
T Consensus 4 ~m~i~IiG~---G~iG~--~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRVGY--TLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHHHH--HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC---CHHHH--HHHHHHHhCCCeEEEEECC
Confidence 579988843 55543 5789999999999988654
No 147
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=49.03 E-value=20 Score=29.24 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
...++|+++.. |.+- ..+++.|.++|++|+++...
T Consensus 17 ~~~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 17 QKSKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred cCCCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 34678988854 4443 45789999999999988764
No 148
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=48.95 E-value=18 Score=30.91 Aligned_cols=38 Identities=18% Similarity=0.404 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMID-IGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~-LA~~L~~rGH~Vt~~~~~ 46 (496)
+||||+++... .|+..-+.. +++.|.+.|++|.++-..
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 46899888777 887666544 466666779999887654
No 149
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=48.51 E-value=67 Score=31.56 Aligned_cols=42 Identities=10% Similarity=0.226 Sum_probs=34.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhH
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARF 52 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (496)
.|+++..++-|-..-...||..|+++|++|.++..+.+....
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~aa 143 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGA 143 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTHH
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchhH
Confidence 445555677999999999999999999999999987765543
No 150
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=48.45 E-value=26 Score=27.76 Aligned_cols=40 Identities=10% Similarity=-0.006 Sum_probs=28.6
Q ss_pred CEEEEEcC-CCcc--CHHHHHHHHHHHHhCCCeE-EEEeCCcch
Q 010988 10 PHFVLFPF-LAQG--HMIPMIDIGRLLAQNGAAI-TIVTTPANA 49 (496)
Q Consensus 10 ~~il~~~~-~~~G--Hi~p~l~LA~~L~~rGH~V-t~~~~~~~~ 49 (496)
||++|+.. +.+| .....+.+|..+.+.||+| .++......
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV 44 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGV 44 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHH
Confidence 36655544 3354 4566788999999999999 888777544
No 151
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=48.34 E-value=21 Score=33.20 Aligned_cols=38 Identities=5% Similarity=-0.145 Sum_probs=28.9
Q ss_pred CCEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQG-H---MIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~G-H---i~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++||+++..+-.+ | +.....++++|.++||+|+.+.+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5788888864322 2 456789999999999999998754
No 152
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=48.29 E-value=15 Score=33.74 Aligned_cols=32 Identities=9% Similarity=0.136 Sum_probs=24.8
Q ss_pred CCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 9 QPHFVLFPF-LAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 9 ~~~il~~~~-~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
||||.|+-. +..| ..+|+.|.++||+|+++..
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 479999876 5555 4678899999999996654
No 153
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=47.71 E-value=1.3e+02 Score=26.81 Aligned_cols=42 Identities=5% Similarity=-0.132 Sum_probs=25.0
Q ss_pred CCCCCCEEEEEcCCCccCHH--HHHHHHHHHHhCCCeEEEEeCC
Q 010988 5 GSSQQPHFVLFPFLAQGHMI--PMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~--p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
||++..+|.++.......+. -...+-+++.+.|+++.+....
T Consensus 1 ~s~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 44 (291)
T 3l49_A 1 MSLEGKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAG 44 (291)
T ss_dssp -CCTTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 45666778776643333232 2455667777788888776544
No 154
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=47.46 E-value=64 Score=25.79 Aligned_cols=97 Identities=8% Similarity=0.036 Sum_probs=62.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSE 85 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~ 85 (496)
+||+|.+.. ...+=.-++.+|+.|.+. ||++. ++......+++. .++.+..+. ..+.
T Consensus 2 ~~~~ialsv--~D~dK~~~v~~a~~~~~ll~Gf~l~--AT~gTa~~L~e~--------~Gl~v~~v~------k~~~--- 60 (134)
T 2xw6_A 2 HMRALALIA--HDAKKEEMVAFCQRHREVLARFPLV--ATGTTGRRIEEA--------TGLTVEKLL------SGPL--- 60 (134)
T ss_dssp CSCEEEEEE--CGGGHHHHHHHHHHTHHHHTTSCEE--ECHHHHHHHHHH--------HCCCCEECS------CGGG---
T ss_pred CccEEEEEE--ecccHHHHHHHHHHHHHHhCCCEEE--EccHHHHHHHHh--------hCceEEEEE------ecCC---
Confidence 477887775 344556789999999999 99654 666555555552 145443331 0110
Q ss_pred cccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCC--C--------cchHHHHHhcCCCeEE
Q 010988 86 NFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMC--Y--------PWTVDTAARFNIPRIS 146 (496)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~--~--------~~a~~~A~~lgiP~v~ 146 (496)
. -.+.+.+++++ .+.|+||.-.- . .....+|-..+||+++
T Consensus 61 --------e-----------G~p~I~d~I~~--geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 110 (134)
T 2xw6_A 61 --------G-----------GDQQMGARVAE--GRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLAT 110 (134)
T ss_dssp --------T-----------HHHHHHHHHHT--TCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEEC
T ss_pred --------C-----------CcchHHHHHHC--CCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEc
Confidence 0 13457778888 89999996432 1 1245688889999997
No 155
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=46.51 E-value=41 Score=28.36 Aligned_cols=45 Identities=7% Similarity=0.099 Sum_probs=31.4
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 1 MASEGSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 1 m~~~~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|....+++++||+|+.+++.. ..-+....+.|.+.|++|+++.+.
T Consensus 1 m~~~~~~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (190)
T 2vrn_A 1 MTKAKDLTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLE 45 (190)
T ss_dssp -----CCTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCCCCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecC
Confidence 444445778899999876544 445666778888899999999876
No 156
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=46.28 E-value=17 Score=28.59 Aligned_cols=35 Identities=14% Similarity=0.084 Sum_probs=24.0
Q ss_pred HHHHhcCCCCeEEEEcCCCc--chHHHHHh---cCCCeEEEe
Q 010988 112 NLLKELAPKPSCIVSDMCYP--WTVDTAAR---FNIPRISFH 148 (496)
Q Consensus 112 ~ll~~~~~~pDlVI~D~~~~--~a~~~A~~---lgiP~v~~~ 148 (496)
++++. .+||+||.|...+ -+..+++. .++|+++++
T Consensus 47 ~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 47 DIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 44556 6999999997666 44555543 588877654
No 157
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=45.73 E-value=1.8e+02 Score=28.36 Aligned_cols=42 Identities=19% Similarity=0.183 Sum_probs=33.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcchhhHH
Q 010988 12 FVLFPFLAQGHMIPMIDIGRLLAQN-GAAITIVTTPANAARFK 53 (496)
Q Consensus 12 il~~~~~~~GHi~p~l~LA~~L~~r-GH~Vt~~~~~~~~~~~~ 53 (496)
+++...|+.|-..=++.+|...+.+ |..|.++..+.....+.
T Consensus 203 ~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l~ 245 (444)
T 2q6t_A 203 NIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQLT 245 (444)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHH
Confidence 4666678899999999999999874 89999999876554443
No 158
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=45.53 E-value=29 Score=32.19 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=27.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|||+++-.++.|- .+|..|+++||+|+++....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc
Confidence 5899998888884 46889999999999998765
No 159
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=45.26 E-value=18 Score=33.73 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=27.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.+||||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 19 ~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 19 SHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred ccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 467899999765555 56899999999999987543
No 160
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=45.26 E-value=11 Score=35.12 Aligned_cols=36 Identities=19% Similarity=0.173 Sum_probs=26.1
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeCC
Q 010988 6 SSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGA-AITIVTTP 46 (496)
Q Consensus 6 ~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH-~Vt~~~~~ 46 (496)
.+++|||.|+-.+..| ..+|+.|++.|| +|+++...
T Consensus 21 ~~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 21 QSNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp ----CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECSS
T ss_pred cCCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcCC
Confidence 3567899999766666 478999999999 99977653
No 161
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=45.21 E-value=30 Score=32.25 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=27.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|||+++-.++.|- .+|..|++.||+|+++....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh
Confidence 6999998777773 57889999999999998765
No 162
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=44.97 E-value=38 Score=30.26 Aligned_cols=35 Identities=11% Similarity=0.059 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++|.++++..+ |-+- .++|++|+++|++|+++...
T Consensus 6 ~~k~vlVTGas-~gIG--~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAGT-KGLG--KQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTTT-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeCCC-chhH--HHHHHHHHHCCCEEEEEcCC
Confidence 46777777544 3232 58899999999999987554
No 163
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=44.92 E-value=59 Score=31.95 Aligned_cols=43 Identities=5% Similarity=0.055 Sum_probs=35.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHH
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFK 53 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 53 (496)
=+++...|+.|-..=.+.+|...+.+|..|.|++.+.....+.
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql~ 241 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKENI 241 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHHH
Confidence 3566667899999999999999999999999999886554443
No 164
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=44.17 E-value=1.6e+02 Score=25.64 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
..|+++++..+.| + =..+|++|+++|++|++....
T Consensus 6 ~~k~vlITGas~g-I--G~~~a~~l~~~G~~v~~~~~~ 40 (255)
T 3icc_A 6 KGKVALVTGASRG-I--GRAIAKRLANDGALVAIHYGN 40 (255)
T ss_dssp TTCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCh-H--HHHHHHHHHHCCCeEEEEeCC
Confidence 3477788766543 2 257899999999999886544
No 165
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=43.97 E-value=25 Score=32.79 Aligned_cols=45 Identities=4% Similarity=-0.042 Sum_probs=33.5
Q ss_pred CCCCCCCCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 3 SEGSSQQPHFVLFPF-LAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 3 ~~~~~~~~~il~~~~-~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
+.+.-+..||+.+.. ++-|=..-...||..|+++|++|-++=-++
T Consensus 41 ~~~~i~~aKVIAIaGKGGVGKTTtavNLA~aLA~~GkkVllID~Dp 86 (314)
T 3fwy_A 41 EADKITGAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 86 (314)
T ss_dssp ------CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred cccCCCCceEEEEECCCccCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 333345778877765 679999999999999999999999885553
No 166
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=43.95 E-value=1.6e+02 Score=29.46 Aligned_cols=34 Identities=12% Similarity=0.235 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcchHHHHHhc-------CCCeEEE
Q 010988 109 PLENLLKELAPKPSCIVSDMCYPWTVDTAARF-------NIPRISF 147 (496)
Q Consensus 109 ~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~l-------giP~v~~ 147 (496)
+++++++. .+||++|.+.. ...+|+.+ |||++.+
T Consensus 425 ~l~~~i~~--~~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 425 HFRSLMFT--RQPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHH--HCCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHhh--cCCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 45566666 58999999853 46678888 9999873
No 167
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=43.93 E-value=26 Score=34.61 Aligned_cols=40 Identities=23% Similarity=0.316 Sum_probs=28.5
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 1 MASEGSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 1 m~~~~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
|...|..+..||+|+-.+..| .++|+.|+++||+|+..=.
T Consensus 1 m~~~~~~~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 1 MKTITTFENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp ---CCTTTTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CcchhhcCCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 544455667899999876544 2459999999999998754
No 168
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=43.87 E-value=44 Score=34.08 Aligned_cols=50 Identities=16% Similarity=0.088 Sum_probs=41.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHH
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVA 57 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~ 57 (496)
+..||++.+.++..|-....-++..|..+|++|+.+....-.+.+.....
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~aa~ 146 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAK 146 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
Confidence 46799999999999999999999999999999999877655444444443
No 169
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=43.38 E-value=30 Score=27.60 Aligned_cols=42 Identities=19% Similarity=0.274 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCeEEEEcCCCc--chHHHHHhc-------CCCeEEEecch
Q 010988 108 LPLENLLKELAPKPSCIVSDMCYP--WTVDTAARF-------NIPRISFHGFS 151 (496)
Q Consensus 108 ~~l~~ll~~~~~~pDlVI~D~~~~--~a~~~A~~l-------giP~v~~~~~~ 151 (496)
.+..++++. .+||+||.|...+ -+..+++.. ++|.+.++...
T Consensus 47 ~~al~~~~~--~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 47 LTALPMLKK--GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHHHHH--HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHHHHHHh--CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
No 170
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=43.13 E-value=58 Score=29.20 Aligned_cols=37 Identities=16% Similarity=0.091 Sum_probs=25.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|.+.|+++++..+ |-+- .++|++|+++|++|++....
T Consensus 23 m~~~k~vlITGas-~gIG--~a~a~~l~~~G~~V~~~~~~ 59 (272)
T 4e3z_A 23 MSDTPVVLVTGGS-RGIG--AAVCRLAARQGWRVGVNYAA 59 (272)
T ss_dssp -CCSCEEEETTTT-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCEEEEECCC-chHH--HHHHHHHHHCCCEEEEEcCC
Confidence 4456788888554 3232 58899999999999877443
No 171
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=42.98 E-value=20 Score=33.08 Aligned_cols=34 Identities=9% Similarity=0.145 Sum_probs=26.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+|+||.|+-.+..|. .+|+.|+++||+|+++...
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 478999998777764 6789999999999988443
No 172
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=42.93 E-value=67 Score=28.94 Aligned_cols=33 Identities=15% Similarity=0.077 Sum_probs=23.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++.++.| + =.++|+.|+++|++|+++...
T Consensus 32 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 32 RTAVVTGAGSG-I--GRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEcCH
Confidence 56666654422 2 257899999999999988743
No 173
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=42.91 E-value=18 Score=31.94 Aligned_cols=37 Identities=11% Similarity=0.020 Sum_probs=32.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|||.|..-++-|=..=...||..|+++|++|.++=..
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5888866678999999999999999999999988544
No 174
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=42.42 E-value=44 Score=29.72 Aligned_cols=38 Identities=8% Similarity=0.092 Sum_probs=28.1
Q ss_pred CCEEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQG-----------HMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~G-----------Hi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+||+|+.....+ ...=+....+.|.+.|++|+++++.
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~ 51 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSET 51 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 5689888764221 3355777788899999999999876
No 175
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=42.31 E-value=27 Score=31.02 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=31.3
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 9 QPHFVLFPF--LAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 9 ~~~il~~~~--~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|+|++.+.. ++-|-..-...||..|+++|++|.++=...
T Consensus 1 M~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 1 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp -CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 357766654 568999999999999999999999986554
No 176
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=41.95 E-value=22 Score=33.78 Aligned_cols=39 Identities=15% Similarity=0.125 Sum_probs=25.6
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|+|++++|++.. +.|.+- ..|+++|.++||+|+.++-..
T Consensus 1 M~~~~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~~ 39 (352)
T 1xgk_A 1 MAQQKKTIAVVG--ATGRQG--ASLIRVAAAVGHHVRAQVHSL 39 (352)
T ss_dssp --CCCCCEEEES--TTSHHH--HHHHHHHHHTTCCEEEEESCS
T ss_pred CCCCCCEEEEEC--CCCHHH--HHHHHHHHhCCCEEEEEECCC
Confidence 345566777664 344443 457889999999999887543
No 177
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=41.93 E-value=21 Score=32.65 Aligned_cols=35 Identities=17% Similarity=0.079 Sum_probs=26.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|++.||.|+-.+..| ..+|..|+++||+|+++...
T Consensus 2 m~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 2 TGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 446799999665555 46899999999999987543
No 178
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=41.70 E-value=69 Score=27.99 Aligned_cols=35 Identities=14% Similarity=0.063 Sum_probs=22.8
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 6 SSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 6 ~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
+++.++ ++++. +.|-+- ..++++|+++|++|+++.
T Consensus 2 ~l~~~~-vlItG-asggiG--~~~a~~l~~~G~~V~~~~ 36 (247)
T 2hq1_A 2 QLKGKT-AIVTG-SSRGLG--KAIAWKLGNMGANIVLNG 36 (247)
T ss_dssp TTTTCE-EEESS-CSSHHH--HHHHHHHHHTTCEEEEEE
T ss_pred CCCCcE-EEEEC-CCchHH--HHHHHHHHHCCCEEEEEc
Confidence 344444 44553 333332 578999999999999884
No 179
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=41.51 E-value=28 Score=27.93 Aligned_cols=39 Identities=13% Similarity=0.265 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeCCc
Q 010988 9 QPHFVLFPFLAQGHMIPMI-DIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l-~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|+||+++-.-..|+..-+. .|++.|.++|++|.++-...
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 4577766655678876544 46777888899999886553
No 180
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=41.43 E-value=31 Score=30.19 Aligned_cols=38 Identities=11% Similarity=0.100 Sum_probs=30.7
Q ss_pred CEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 10 PHFVLFPF--LAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 10 ~~il~~~~--~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
+|++.+.. ++-|-..-...||..|+++|++|.++=...
T Consensus 2 ~~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred ceEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 46655544 568999999999999999999999986654
No 181
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=41.28 E-value=18 Score=33.61 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=26.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
..++||.|+-.+..| ..+|+.|+++||+|+++..
T Consensus 7 ~~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CCSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred cCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 457899999766555 3689999999999997743
No 182
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=40.71 E-value=29 Score=33.12 Aligned_cols=38 Identities=16% Similarity=0.131 Sum_probs=26.2
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+.+||+|++.-. .|-+- ..|+++|.++||+|+.+.-.
T Consensus 25 ~~~~~~~vlVtGa--tG~iG--~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 25 WPSENLKISITGA--GGFIA--SHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp CTTSCCEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred ccccCCeEEEECC--ccHHH--HHHHHHHHHCCCeEEEEECC
Confidence 4455677776643 33332 46789999999999988754
No 183
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=40.71 E-value=70 Score=23.08 Aligned_cols=55 Identities=15% Similarity=0.273 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHhcCChhH---HHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHhcCCC
Q 010988 429 KKEDVVKAINMLMNEGGER---ENRRKRAREFQMMAKRATEETGSSSLMIKLLIQDIMHQPH 487 (496)
Q Consensus 429 ~~~~l~~~i~~lL~~~~~~---~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~ 487 (496)
--++|..++.++-.||+.- .+|.....++.-. +.+ ..++.+++.++.+.|+++.|
T Consensus 26 ~~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl~eysl~-rNa---qSttiKa~KDi~~sI~~~~~ 83 (85)
T 2ca5_A 26 LQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLY-RNA---QSNTVKVIKDVDAAILEHHH 83 (85)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH-HHH---HHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH-HHH---HHHHHHHHHHHHHHHHHhcc
Confidence 3456788888777666543 3444444444433 333 35778999999999999866
No 184
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=40.36 E-value=77 Score=27.75 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=22.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++..+ |-+- ..+|++|+++|++|+++...
T Consensus 6 k~vlITGas-~gIG--~~~a~~l~~~G~~v~~~~r~ 38 (247)
T 3lyl_A 6 KVALVTGAS-RGIG--FEVAHALASKGATVVGTATS 38 (247)
T ss_dssp CEEEESSCS-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCC-ChHH--HHHHHHHHHCCCEEEEEeCC
Confidence 455566443 2222 57899999999999887654
No 185
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=40.23 E-value=74 Score=32.99 Aligned_cols=40 Identities=13% Similarity=0.002 Sum_probs=26.5
Q ss_pred HHHHHHhcCCCCeEEEEcCC-CcchHHHHHhcCCCeEEEecch
Q 010988 110 LENLLKELAPKPSCIVSDMC-YPWTVDTAARFNIPRISFHGFS 151 (496)
Q Consensus 110 l~~ll~~~~~~pDlVI~D~~-~~~a~~~A~~lgiP~v~~~~~~ 151 (496)
+.+.++. .+||+||+-.+ ..-...+.......++.++++.
T Consensus 67 ~~~~l~~--~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~sl 107 (660)
T 1z7e_A 67 WVERIAQ--LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL 107 (660)
T ss_dssp HHHHHHH--HCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSS
T ss_pred HHHHHHh--cCCCEEEEcCcccccCHHHHhcCCCCeEEecCCc
Confidence 4455666 59999987644 3345556666667778887764
No 186
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=40.14 E-value=18 Score=33.73 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=25.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
.++||+|+-.++.| ..+|..|++.||+|+++.
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~ 49 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIA 49 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEE
Confidence 46899999877777 467889999999999993
No 187
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=40.10 E-value=22 Score=26.92 Aligned_cols=34 Identities=15% Similarity=0.154 Sum_probs=24.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNG-AAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rG-H~Vt~~~~~ 46 (496)
.+++|+++.. |-+- ..+++.|.++| |+|+++...
T Consensus 4 ~~~~v~I~G~---G~iG--~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGA---GKIG--QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp TCEEEEEECC---SHHH--HHHHHHHHHCSSEEEEEEESC
T ss_pred CcCeEEEECC---CHHH--HHHHHHHHhCCCceEEEEeCC
Confidence 3567777744 4333 46789999999 999887654
No 188
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=40.08 E-value=32 Score=29.01 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=23.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+|++.- +.|-+- ..|+++|.++||+|+.+.-.
T Consensus 4 ~~ilVtG--atG~iG--~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFG--ATGQTG--LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEES--TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEc--CCcHHH--HHHHHHHHHCCCeEEEEEeC
Confidence 5776663 334332 57889999999999988765
No 189
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=39.76 E-value=3e+02 Score=27.52 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=24.9
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcchHHHHHhc-------CCCeEEE
Q 010988 109 PLENLLKELAPKPSCIVSDMCYPWTVDTAARF-------NIPRISF 147 (496)
Q Consensus 109 ~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~l-------giP~v~~ 147 (496)
+++++++. .+||+||.... ...+|+.+ |||++.+
T Consensus 429 ~l~~~i~~--~~pDLlig~s~---~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 429 HLRSLVFT--DKPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HHHHHHHH--TCCSEEEECTT---HHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHh--cCCCEEEECcc---HHHHHHHhhcccccCCCceEEe
Confidence 45667777 79999999853 33466666 9999974
No 190
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=39.74 E-value=30 Score=24.49 Aligned_cols=49 Identities=10% Similarity=0.108 Sum_probs=31.2
Q ss_pred hCCcEeccCCccccchh-HHHH-HHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhc
Q 010988 380 AGVPMITWPLFGDQFCN-EKLI-VQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMN 442 (496)
Q Consensus 380 ~GvP~v~~P~~~DQ~~n-a~r~-~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~ 442 (496)
+|+|+++.-..+-|.+. --.- ++.-|+...+-++ .++++|.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydvlks--------------tdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKS--------------TDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEEC--------------CCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhhhcc--------------CCHHHHHHHHHHHHH
Confidence 68898888777777652 2222 0233555444444 788888888887763
No 191
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=39.67 E-value=29 Score=31.19 Aligned_cols=42 Identities=12% Similarity=0.238 Sum_probs=31.6
Q ss_pred CCCCCCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 5 GSSQQPHFVLFPF--LAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 5 ~~~~~~~il~~~~--~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|..+++|++.+.. ++-|=..-...||..|+ +|++|.++=...
T Consensus 22 ~~~~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~ 65 (267)
T 3k9g_A 22 MDNKKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDT 65 (267)
T ss_dssp ----CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECT
T ss_pred CCCCCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 4456778877765 56899999999999999 999999985543
No 192
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=39.41 E-value=27 Score=32.07 Aligned_cols=38 Identities=3% Similarity=-0.171 Sum_probs=28.1
Q ss_pred CCEEEEEcCCCccC---HHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGH---MIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GH---i~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
||||+++..+.... ......++++|.++||+|.++.+.
T Consensus 1 mm~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 1 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CCEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred CceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 36999999764211 234567999999999999988654
No 193
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=39.14 E-value=91 Score=28.00 Aligned_cols=33 Identities=18% Similarity=0.032 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
-|+++++..+. -+- .++|+.|+++|++|+++..
T Consensus 15 gk~~lVTGas~-gIG--~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 15 GRVAFITGAAR-GQG--RSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp TCEEEEESTTS-HHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCc-HHH--HHHHHHHHHCCCEEEEEec
Confidence 46777775543 222 5789999999999998754
No 194
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=39.08 E-value=18 Score=33.47 Aligned_cols=35 Identities=11% Similarity=0.051 Sum_probs=26.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.++|||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 5 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 456899999766555 46889999999999988543
No 195
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=39.06 E-value=1.1e+02 Score=28.70 Aligned_cols=101 Identities=12% Similarity=0.112 Sum_probs=58.7
Q ss_pred CEEEEEcCCCcc--C--HHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCC
Q 010988 10 PHFVLFPFLAQG--H--MIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSE 85 (496)
Q Consensus 10 ~~il~~~~~~~G--H--i~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~ 85 (496)
.-|++.|..+.. . ..-+..+++.|.++|++|.++..+...+..++..... +. ..+. +. +.
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~---~~--~~~~---------l~-g~- 249 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQM---ET--KPIV---------AT-GK- 249 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTC---SS--CCEE---------CT-TC-
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhc---cc--ccEE---------ee-CC-
Confidence 346666654422 2 2348899999998999999877766555444432211 00 0000 00 00
Q ss_pred cccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEEecch
Q 010988 86 NFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISFHGFS 151 (496)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~~~~ 151 (496)
.-..++..+++ +-|++|+- ..+..-+|..+|+|.+.++..+
T Consensus 250 -------------------~sl~e~~ali~----~a~~~i~~--DsG~~HlAaa~g~P~v~lfg~t 290 (349)
T 3tov_A 250 -------------------FQLGPLAAAMN----RCNLLITN--DSGPMHVGISQGVPIVALYGPS 290 (349)
T ss_dssp -------------------CCHHHHHHHHH----TCSEEEEE--SSHHHHHHHTTTCCEEEECSSC
T ss_pred -------------------CCHHHHHHHHH----hCCEEEEC--CCCHHHHHHhcCCCEEEEECCC
Confidence 01224555665 47898874 2345667889999999976554
No 196
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=38.99 E-value=28 Score=32.39 Aligned_cols=33 Identities=6% Similarity=0.054 Sum_probs=27.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
+|||+++..+ ....+++++.++||+|.++....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 3699998866 46789999999999999887664
No 197
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=38.82 E-value=96 Score=27.28 Aligned_cols=39 Identities=15% Similarity=0.207 Sum_probs=24.6
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCe-EEEEeCCc
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAA-ITIVTTPA 47 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~-Vt~~~~~~ 47 (496)
|+++..++++. ++.|-+ =..+|++|+++|++ |+++....
T Consensus 1 m~l~~k~vlVt--Gas~gI--G~~~a~~l~~~G~~~v~~~~r~~ 40 (254)
T 1sby_A 1 MDLTNKNVIFV--AALGGI--GLDTSRELVKRNLKNFVILDRVE 40 (254)
T ss_dssp CCCTTCEEEEE--TTTSHH--HHHHHHHHHHTCCSEEEEEESSC
T ss_pred CCCCCcEEEEE--CCCChH--HHHHHHHHHHCCCcEEEEEecCc
Confidence 34555555555 333433 25789999999997 77766543
No 198
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=38.72 E-value=36 Score=29.87 Aligned_cols=44 Identities=14% Similarity=-0.012 Sum_probs=32.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHH-HhCCCeEEEEeCCcchhhHHHH
Q 010988 12 FVLFPFLAQGHMIPMIDIGRLL-AQNGAAITIVTTPANAARFKTV 55 (496)
Q Consensus 12 il~~~~~~~GHi~p~l~LA~~L-~~rGH~Vt~~~~~~~~~~~~~~ 55 (496)
+++...|+.|-..=.+++|... .+.|..|.+++.+.....+...
T Consensus 33 ~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~~~ 77 (251)
T 2zts_A 33 VLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLRRE 77 (251)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHHHH
Confidence 5666668899999999988664 5558899999887665554443
No 199
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=38.45 E-value=58 Score=24.78 Aligned_cols=36 Identities=22% Similarity=0.264 Sum_probs=26.2
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
|+|+++||+++- .+-.-...+.+.|.+.|++|+.+.
T Consensus 1 m~m~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~ 36 (132)
T 2rdm_A 1 MSLEAVTILLAD----DEAILLLDFESTLTDAGFLVTAVS 36 (132)
T ss_dssp -CCSSCEEEEEC----SSHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCCceEEEEc----CcHHHHHHHHHHHHHcCCEEEEEC
Confidence 568889999885 444556677888888899988543
No 200
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=38.33 E-value=44 Score=25.36 Aligned_cols=39 Identities=23% Similarity=0.269 Sum_probs=25.3
Q ss_pred HHHHhcCCCCeEEEEcCCCc--chHHHHHhc-------CCCeEEEecchH
Q 010988 112 NLLKELAPKPSCIVSDMCYP--WTVDTAARF-------NIPRISFHGFSC 152 (496)
Q Consensus 112 ~ll~~~~~~pDlVI~D~~~~--~a~~~A~~l-------giP~v~~~~~~~ 152 (496)
+.++. .+||+||.|...+ .+..+++.+ ++|.+.++....
T Consensus 40 ~~l~~--~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~ 87 (122)
T 3gl9_A 40 EKLSE--FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGG 87 (122)
T ss_dssp HHHTT--BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCS
T ss_pred HHHHh--cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCc
Confidence 34455 6899999997655 344555432 588888765543
No 201
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=38.12 E-value=27 Score=32.39 Aligned_cols=32 Identities=9% Similarity=0.160 Sum_probs=27.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
|.||.|+-.+..|. ++|+.|.++||+|++.--
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 56899999988884 689999999999998743
No 202
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=38.01 E-value=38 Score=29.69 Aligned_cols=39 Identities=13% Similarity=0.212 Sum_probs=23.9
Q ss_pred CCCCEEEEEcC-CCc----cCHHH-HH-HHHHHHHhCCCeEEEEeC
Q 010988 7 SQQPHFVLFPF-LAQ----GHMIP-MI-DIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 7 ~~~~~il~~~~-~~~----GHi~p-~l-~LA~~L~~rGH~Vt~~~~ 45 (496)
.+||||+++.. |-. +-++- ++ .+++.|.+.||+|++.-.
T Consensus 23 ~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 23 NAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp -CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred ccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 56889877764 432 23443 22 356666778999997654
No 203
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=37.99 E-value=46 Score=29.78 Aligned_cols=42 Identities=17% Similarity=0.175 Sum_probs=27.8
Q ss_pred CCCCCCEEEEEcCCC--ccCHHHHHH-HHHHHHhCCCeEEEEeCC
Q 010988 5 GSSQQPHFVLFPFLA--QGHMIPMID-IGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 5 ~~~~~~~il~~~~~~--~GHi~p~l~-LA~~L~~rGH~Vt~~~~~ 46 (496)
+.+.||||+++.... .|...-+.. +++.|.+.|++|.++-..
T Consensus 30 ~~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL~ 74 (247)
T 2q62_A 30 FSTHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPS 74 (247)
T ss_dssp CCCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred ccCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 345688998877543 355555544 566677789999877543
No 204
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=37.96 E-value=33 Score=30.60 Aligned_cols=38 Identities=11% Similarity=0.107 Sum_probs=31.4
Q ss_pred CCCCEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 7 SQQPHFVLFPFL--AQGHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 7 ~~~~~il~~~~~--~~GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
++|+|.+|++.. .-|=..=...|++.|+++|.+|.++=
T Consensus 18 ~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 18 YFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp -CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 457787777754 48899999999999999999999983
No 205
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=37.91 E-value=31 Score=29.73 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=23.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|||++.- +.|.+- ..|+++|.++||+|+.+.-.
T Consensus 1 MkilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLG--ATGRAG--SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEEec
Confidence 4766554 334443 57899999999999998765
No 206
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=37.77 E-value=26 Score=33.73 Aligned_cols=36 Identities=11% Similarity=0.163 Sum_probs=27.6
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
|+++..+|+|+-.+-.| +.+|..|+++|++|+++--
T Consensus 1 M~~~~~~V~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISG-----LTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp -CCCCSEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 44667899988765444 6778899999999999954
No 207
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=37.72 E-value=38 Score=29.83 Aligned_cols=35 Identities=3% Similarity=-0.121 Sum_probs=28.0
Q ss_pred CEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 10 PHFVLFPF--LAQGHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 10 ~~il~~~~--~~~GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
||.+|++. +.-|-..=...|++.|+++|++|.++=
T Consensus 4 mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 4 MKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp CEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 45444444 358999999999999999999999973
No 208
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=37.62 E-value=32 Score=29.52 Aligned_cols=34 Identities=18% Similarity=0.120 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|||++.- +.|.+- ..|+++|.++||+|+.+.-..
T Consensus 1 MkvlVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIG--ATGRAG--SRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEc--CCchhH--HHHHHHHHhCCCEEEEEEcCc
Confidence 4766654 334443 478999999999999887653
No 209
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=37.30 E-value=1.4e+02 Score=23.93 Aligned_cols=100 Identities=12% Similarity=0.139 Sum_probs=59.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCcc
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSENF 87 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~~ 87 (496)
+... +|++... .+=.-++.+|+.|.+.||++. ++......+++. ++.+..+.. ..++...
T Consensus 23 P~~g-vliSv~d-~dK~~l~~~a~~l~~lGf~i~--AT~GTa~~L~~~---------Gi~v~~v~k------~~egg~~- 82 (143)
T 2yvq_A 23 PQKG-ILIGIQQ-SFRPRFLGVAEQLHNEGFKLF--ATEATSDWLNAN---------NVPATPVAW------PSQEGQN- 82 (143)
T ss_dssp CCSE-EEEECCG-GGHHHHHHHHHHHHTTTCEEE--EEHHHHHHHHHT---------TCCCEEECC------GGGC----
T ss_pred CCCC-EEEEecc-cchHHHHHHHHHHHHCCCEEE--ECchHHHHHHHc---------CCeEEEEEe------ccCCCcc-
Confidence 3344 5555433 456678999999999999854 334444455442 466555531 1111000
Q ss_pred cCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCC--------cchHHHHHhcCCCeEE
Q 010988 88 DMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCY--------PWTVDTAARFNIPRIS 146 (496)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~--------~~a~~~A~~lgiP~v~ 146 (496)
...+.+.+++++ .+.|+||..... +.....|-.++||+++
T Consensus 83 -----------------~~~~~i~d~i~~--g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 83 -----------------PSLSSIRKLIRD--GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp -------------------CBCHHHHHHT--TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred -----------------cccccHHHHHHC--CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 000346677777 899999986433 1334567789999996
No 210
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=37.28 E-value=1.2e+02 Score=27.57 Aligned_cols=34 Identities=12% Similarity=0.066 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|+++++..+ |-+- ..+|++|+++|++|+++.-.
T Consensus 31 gk~vlVTGas-~gIG--~~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 31 GRAAVVTGGA-SGIG--LATATEFARRGARLVLSDVD 64 (301)
T ss_dssp TCEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCC-CHHH--HHHHHHHHHCCCEEEEEECC
Confidence 3567777544 3332 57899999999999887654
No 211
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=37.20 E-value=25 Score=33.32 Aligned_cols=36 Identities=3% Similarity=0.092 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQN-GAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~r-GH~Vt~~~~~ 46 (496)
|+||||++.- +.|-+- ..|+++|.++ ||+|+.+.-.
T Consensus 22 m~~~~vlVtG--atG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 22 MKAKKVLILG--VNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp -CCCEEEEES--CSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred cCCCEEEEEC--CCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 5667877664 334443 4688899998 9999998754
No 212
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=37.04 E-value=52 Score=26.48 Aligned_cols=41 Identities=12% Similarity=0.193 Sum_probs=29.1
Q ss_pred CCEEEEEcC-CCccCHHH--HHHHHHHHHhCCCeE-EEEeCCcch
Q 010988 9 QPHFVLFPF-LAQGHMIP--MIDIGRLLAQNGAAI-TIVTTPANA 49 (496)
Q Consensus 9 ~~~il~~~~-~~~GHi~p--~l~LA~~L~~rGH~V-t~~~~~~~~ 49 (496)
.||++|+.. +-+|+-.. .+.+|+.+.+.||+| .++-..+..
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV 56 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGV 56 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHH
Confidence 467766655 44765554 567799999999999 887766433
No 213
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=37.04 E-value=58 Score=26.53 Aligned_cols=40 Identities=15% Similarity=0.004 Sum_probs=26.6
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.||.+|||.+-+=.+. +.==-.|.+.|.++||+|+=+.+.
T Consensus 3 ~~m~~mkI~igsDhaG--~~lK~~i~~~L~~~G~eV~D~G~~ 42 (148)
T 4em8_A 3 GSMVVKRVFLSSDHAG--VELRLFLSAYLRDLGCEVFDCGCD 42 (148)
T ss_dssp CCCSCSEEEEEECGGG--HHHHHHHHHHHHHTTCEEEECCCC
T ss_pred CcceeeEEEEEECchh--HHHHHHHHHHHHHCCCEEEEeCCC
Confidence 3677899888763221 222335778899999999866554
No 214
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=36.87 E-value=27 Score=30.25 Aligned_cols=34 Identities=21% Similarity=0.160 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
||||++.. +.|.+- ..|+++|.++||+|+.+.-.
T Consensus 4 m~~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLIG--ASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEET--CCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEEc--CCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 56777664 344443 47889999999999988765
No 215
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=36.78 E-value=40 Score=25.74 Aligned_cols=38 Identities=11% Similarity=0.028 Sum_probs=29.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|||+++|..+.|+-.-...+-+.+.++|.++.+-+.+
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~~ 41 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIA 41 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 47899999998888866677788888889887654433
No 216
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=36.78 E-value=2.5e+02 Score=25.62 Aligned_cols=20 Identities=15% Similarity=-0.034 Sum_probs=14.7
Q ss_pred HHHHHHhCCCCeEEEEeCCC
Q 010988 302 LGLGLEASKKPFIWVIRGGN 321 (496)
Q Consensus 302 ~~~a~~~~~~~~i~~~~~~~ 321 (496)
+++++.+.+..++++.+...
T Consensus 126 LLr~va~~gkPVilK~G~~~ 145 (285)
T 3sz8_A 126 LVVAIAKAGKPVNVKKPQFM 145 (285)
T ss_dssp HHHHHHHTSSCEEEECCTTS
T ss_pred HHHHHHccCCcEEEeCCCCC
Confidence 56666678888888887753
No 217
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=36.73 E-value=2e+02 Score=24.67 Aligned_cols=40 Identities=10% Similarity=0.132 Sum_probs=29.8
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|+.+.+|+.++| .+-.|....--..|.++|++|.=+.+..
T Consensus 21 mp~~~Lr~avVC---aSN~NRSMEAH~~L~k~Gf~V~SfGTGs 60 (214)
T 4h3k_B 21 MPSSPLRVAVVS---SSNQNRSMEAHNILSKRGFSVRSFGTGT 60 (214)
T ss_dssp -----CEEEEEE---SSSSSHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCCCCCeEEEEC---CCCcchhHHHHHHHHHCCCceEeecCCC
Confidence 344568888887 4678888888899999999999888874
No 218
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=36.71 E-value=62 Score=30.66 Aligned_cols=38 Identities=11% Similarity=0.125 Sum_probs=24.6
Q ss_pred eEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEEEEeCCC
Q 010988 282 SVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGN 321 (496)
Q Consensus 282 ~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~ 321 (496)
.+|+.+.||-+...+ ..+++++|.+.+.+++|+.+...
T Consensus 4 ~i~i~~GGTgGHi~p--alala~~L~~~g~~V~~vg~~~g 41 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFP--ALACAREFQARGYAVHWLGTPRG 41 (365)
T ss_dssp EEEEECCSSHHHHHH--HHHHHHHHHHTTCEEEEEECSSS
T ss_pred cEEEEcCCCHHHHHH--HHHHHHHHHhCCCEEEEEECCch
Confidence 366666666443111 23577888888999999875543
No 219
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=36.63 E-value=23 Score=33.95 Aligned_cols=30 Identities=20% Similarity=0.183 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
|||+|+-.+--| +.+|-.|+++|++|+++-
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 699988765455 778889999999999984
No 220
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=36.42 E-value=1.5e+02 Score=26.65 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
+.|+++++.++. -+- .++|+.|+++|++|+++..
T Consensus 28 ~~k~~lVTGas~-GIG--~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 28 ARPVAIVTGGRR-GIG--LGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCCEEEEETTTS-HHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEecCCC-HHH--HHHHHHHHHCCCeEEEEeC
Confidence 346777775543 222 5789999999999998864
No 221
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=36.26 E-value=2.4e+02 Score=25.90 Aligned_cols=105 Identities=11% Similarity=0.146 Sum_probs=58.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGS 84 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~ 84 (496)
.+++||+++.++. || .+.+|..+-.+. +.+|..+.+.... +..... ..++.+..+|.. .
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~--~~~~A~-----~~gIp~~~~~~~--------~- 163 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQD--LRSMVE-----WHDIPYYHVPVD--------P- 163 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSST--THHHHH-----TTTCCEEECCCC--------S-
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHH--HHHHHH-----HcCCCEEEcCCC--------c-
Confidence 3578999888766 54 466666655443 5788877653211 122211 236777776411 0
Q ss_pred CcccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCeEEEe
Q 010988 85 ENFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCY-PWTVDTAARFNIPRISFH 148 (496)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~-~~a~~~A~~lgiP~v~~~ 148 (496)
.+ . .....++.+++++ .+||+||.-.+. .-...+.+.+.-.++.++
T Consensus 164 ~~-------r---------~~~~~~~~~~l~~--~~~DliVlagym~IL~~~~l~~~~~~~INiH 210 (302)
T 3o1l_A 164 KD-------K---------EPAFAEVSRLVGH--HQADVVVLARYMQILPPQLCREYAHQVINIH 210 (302)
T ss_dssp SC-------C---------HHHHHHHHHHHHH--TTCSEEEESSCCSCCCTTHHHHTTTCEEEEE
T ss_pred CC-------H---------HHHHHHHHHHHHH--hCCCEEEHhHhhhhcCHHHHhhhhCCeEEeC
Confidence 00 0 0123456677777 799999976443 334445555555566544
No 222
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=36.17 E-value=82 Score=28.14 Aligned_cols=36 Identities=19% Similarity=0.210 Sum_probs=25.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
-+.|+++++..+ |-+- ..+|++|+++|++|.++...
T Consensus 23 ~~~k~vlITGas-~gIG--~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 23 QAKRVAFVTGGM-GGLG--AAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp -CCCEEEETTTT-SHHH--HHHHHHHHTTTCEEEEEECS
T ss_pred hcCCEEEEECCC-chHH--HHHHHHHHHCCCEEEEEcCC
Confidence 345778887554 3222 57899999999999988644
No 223
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=36.13 E-value=2e+02 Score=26.34 Aligned_cols=20 Identities=5% Similarity=-0.278 Sum_probs=13.6
Q ss_pred HHHHHHhCCCCeEEEEeCCC
Q 010988 302 LGLGLEASKKPFIWVIRGGN 321 (496)
Q Consensus 302 ~~~a~~~~~~~~i~~~~~~~ 321 (496)
+++++.+.+..++++.+...
T Consensus 147 LLr~va~~gkPVilK~Gms~ 166 (298)
T 3fs2_A 147 LLIAAARTGRVVNVKKGQFL 166 (298)
T ss_dssp HHHHHHHTTSEEEEECCTTC
T ss_pred HHHHHHccCCcEEEeCCCCC
Confidence 45556677888888877643
No 224
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=35.98 E-value=48 Score=25.71 Aligned_cols=39 Identities=5% Similarity=-0.043 Sum_probs=28.2
Q ss_pred EEEEEcCC-CccCH--HHHHHHHHHHHhCCCeEEEEeCCcch
Q 010988 11 HFVLFPFL-AQGHM--IPMIDIGRLLAQNGAAITIVTTPANA 49 (496)
Q Consensus 11 ~il~~~~~-~~GHi--~p~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (496)
|++|+-.. -+|+- .-.+.+|..+...||+|.++-..+..
T Consensus 3 k~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV 44 (119)
T 2d1p_B 3 RIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGV 44 (119)
T ss_dssp CEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHH
Confidence 56555543 36765 55678899999999999999877543
No 225
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=35.72 E-value=2.1e+02 Score=26.59 Aligned_cols=153 Identities=8% Similarity=-0.031 Sum_probs=74.2
Q ss_pred CeEEEEeeCCccCCC-hhhHHHHHHHHHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhcc
Q 010988 281 NSVVYVCLGSICNLT-SSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSH 359 (496)
Q Consensus 281 ~~vI~vs~GS~~~~~-~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~ 359 (496)
+++++++ |...... .++...+++-+++.+++-|..+++-. .. .|. . .+..|..... ...+...
T Consensus 102 ~~~lll~-gpeP~~~w~~f~~~vl~~a~~~gV~~vv~Lggl~-~~-------~ph-t----rp~~V~~~at--~~~l~~~ 165 (319)
T 2p90_A 102 KPFLMLS-GPEPDLRWGDFSNAVVDLVEKFGVENTICLYAAP-MT-------VPH-T----RPTVVTAHGN--STDRLKD 165 (319)
T ss_dssp CEEEEEE-EECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEE-ES-------CCT-T----SCCCEEEEES--SGGGCSS
T ss_pred CeEEEEE-CCCChHHHHHHHHHHHHHHHHcCCCEEEEEeCcc-CC-------CCC-C----CCCCeEEEeC--CHHHHhh
Confidence 4466665 5555533 45566788888889999888776643 10 111 0 1223443222 2222221
Q ss_pred ccc--cccccCCChhhHH--HHHHhCCcEecc----CCcc---ccchhHHHHHHHhh--ceEEecccCCCCCCccccccc
Q 010988 360 PSI--GGFLTHCGWNSSL--EAISAGVPMITW----PLFG---DQFCNEKLIVQVLN--IGVRIGVEVPLDFGEEEEIGV 426 (496)
Q Consensus 360 ~~~--~~~I~HGG~gs~~--eal~~GvP~v~~----P~~~---DQ~~na~r~~e~~G--~g~~l~~~~~~~~~~~~~~~~ 426 (496)
-.. +-..--||..++. ++...|.|.+++ |.+. +-+.=|..+.+.+. +|+.++..+ -
T Consensus 166 ~~~~~~~~~ipggi~glL~~~~~~~Gi~a~~l~~~vphYl~~~pdP~AA~~lL~~l~~l~gl~id~~~-----------L 234 (319)
T 2p90_A 166 QVSLDTRMTVPGSASLMLEKLLKDKGKNVSGYTVHVPHYVSASPYPAATLKLLQSIADSADLNLPLLA-----------L 234 (319)
T ss_dssp CCCCCCCEEECCCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCCHH-----------H
T ss_pred hhccccCcEEeccHHHHHHHHHHHCCCCEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCCCHHH-----------H
Confidence 111 0011135677665 556889997665 4332 22222222212221 244444331 1
Q ss_pred ccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Q 010988 427 LVKKEDVVKAINMLMNEGGERENRRKRAREFQMM 460 (496)
Q Consensus 427 ~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~ 460 (496)
.-.++++.+.|.++.++..+-..|-+...+-.+.
T Consensus 235 ~e~A~~~e~~i~~l~~~~~e~~~~V~~LE~~~D~ 268 (319)
T 2p90_A 235 ERDAEKVHRQLMEQTEESSEIQRVVGALEQQYDS 268 (319)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhh
Confidence 3456777788888886554333343344443444
No 226
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=35.46 E-value=1.5e+02 Score=25.30 Aligned_cols=37 Identities=11% Similarity=0.063 Sum_probs=27.2
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEEecch
Q 010988 109 PLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISFHGFS 151 (496)
Q Consensus 109 ~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~~~~ 151 (496)
.+.++.+ .++|+||.|.. ...+|+++|+|.+.+.+..
T Consensus 134 ~i~~l~~---~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 134 LISKVKT---ENIKIVVSGKT---VTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp HHHHHHH---TTCCEEEECHH---HHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHH---CCCeEEECCHH---HHHHHHHcCCcEEEEecCH
Confidence 4444444 49999999843 4678999999999876643
No 227
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=35.45 E-value=83 Score=30.70 Aligned_cols=34 Identities=12% Similarity=0.149 Sum_probs=24.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.+.||+++. .|. -.+.+++++++.|++|+.+...
T Consensus 5 ~~~kiLI~g---~g~--~a~~i~~aa~~~G~~~v~v~~~ 38 (446)
T 3ouz_A 5 EIKSILIAN---RGE--IALRALRTIKEMGKKAICVYSE 38 (446)
T ss_dssp CCCEEEECC---CHH--HHHHHHHHHHHTTCEEEEEEEG
T ss_pred ccceEEEEC---CCH--HHHHHHHHHHHcCCEEEEEEcC
Confidence 345677743 222 4578999999999999988654
No 228
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=35.41 E-value=32 Score=33.68 Aligned_cols=26 Identities=12% Similarity=0.028 Sum_probs=20.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGA 38 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH 38 (496)
+|||||++..++. -.+||+.|++.+.
T Consensus 2 ~~mkvlviG~ggr-----e~ala~~l~~s~~ 27 (431)
T 3mjf_A 2 NAMNILIIGNGGR-----EHALGWKAAQSPL 27 (431)
T ss_dssp -CEEEEEEECSHH-----HHHHHHHHTTCTT
T ss_pred CCcEEEEECCCHH-----HHHHHHHHHhCCC
Confidence 4789999987754 4478999998865
No 229
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=34.98 E-value=36 Score=31.63 Aligned_cols=34 Identities=21% Similarity=0.234 Sum_probs=27.7
Q ss_pred CEEEEEcCCC--ccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLA--QGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~--~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.+|+++|.++ .|+= +.+|+.|+++|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEec
Confidence 4899999876 4443 78999999999999998653
No 230
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=34.93 E-value=40 Score=31.74 Aligned_cols=38 Identities=5% Similarity=0.059 Sum_probs=26.5
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHh--CCCeEEEEeCC
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQ--NGAAITIVTTP 46 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~--rGH~Vt~~~~~ 46 (496)
|++++++|++.-. .|-+- ..|+++|.+ +||+|+.+.-.
T Consensus 6 ~~~~~~~vlVTGa--tG~IG--~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 6 DELENQTILITGG--AGFVG--SNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CCCTTCEEEEETT--TSHHH--HHHHHHHHHHCTTSEEEEEECC
T ss_pred hhcCCCEEEEECC--CCHHH--HHHHHHHHhhCCCCeEEEEECC
Confidence 4466778777643 33332 367899999 99999998754
No 231
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=34.85 E-value=1.2e+02 Score=26.52 Aligned_cols=35 Identities=14% Similarity=0.051 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+.|.++++..+ |-+- .++|++|+++|++|+++...
T Consensus 3 ~~k~~lVTGas-~gIG--~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 3 MTKSALVTGAS-RGIG--RSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp CSCEEEETTCS-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCC-ChHH--HHHHHHHHHCCCEEEEEeCC
Confidence 34677777554 3222 57899999999999887653
No 232
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=34.80 E-value=67 Score=24.66 Aligned_cols=38 Identities=8% Similarity=0.042 Sum_probs=30.7
Q ss_pred CCCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEe
Q 010988 7 SQQPHFVLFPFLAQGHMIP-MIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p-~l~LA~~L~~rGH~Vt~~~ 44 (496)
.+++||+++|..+.|.-.- ...|-+.+.+.|.++.+-.
T Consensus 19 ~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 19 GSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp CSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 4578899999999999875 6777788888999875544
No 233
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=34.68 E-value=14 Score=33.77 Aligned_cols=29 Identities=14% Similarity=0.038 Sum_probs=24.5
Q ss_pred cccccccCCChhhHHHHHHh------CCcEeccCC
Q 010988 361 SIGGFLTHCGWNSSLEAISA------GVPMITWPL 389 (496)
Q Consensus 361 ~~~~~I~HGG~gs~~eal~~------GvP~v~~P~ 389 (496)
.++++|.=||=||+.+++.. ++|++.+|.
T Consensus 35 ~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 35 EPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp SCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 34559999999999999875 889999986
No 234
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=34.67 E-value=71 Score=25.29 Aligned_cols=47 Identities=15% Similarity=0.017 Sum_probs=33.0
Q ss_pred hCCcEeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhc
Q 010988 380 AGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMN 442 (496)
Q Consensus 380 ~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~ 442 (496)
..+|+|++--..+ ......+ -..|+--.+.+. ++.++|.++|+.++.
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~-~~~g~~~~l~kP--------------~~~~~L~~~i~~~~~ 120 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQA-IQDGAYDFIAKP--------------FAADRLVQSARRAEE 120 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHH-HHTTCCEEEESS--------------CCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHH-HhcCCCeEEeCC--------------CCHHHHHHHHHHHHH
Confidence 4788888755444 3344555 267776666554 899999999999986
No 235
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=34.64 E-value=22 Score=28.40 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
+.||+++.++..| ..+|+.|.++||+|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 4588888765454 478999999999999998763
No 236
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=34.62 E-value=35 Score=29.91 Aligned_cols=44 Identities=5% Similarity=-0.036 Sum_probs=29.3
Q ss_pred EEEeCcchh-hhhh-ccccccccccCCChhhHHHHH---------HhCCcEeccCC
Q 010988 345 ILILGWAPQ-VLIL-SHPSIGGFLTHCGWNSSLEAI---------SAGVPMITWPL 389 (496)
Q Consensus 345 v~v~~~~pq-~~~l-~~~~~~~~I~HGG~gs~~eal---------~~GvP~v~~P~ 389 (496)
+.+.+..+. ..++ ..+++ .++--||.||+-|.. .+++|++++-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 555565553 3333 34443 577889999988776 47999998864
No 237
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=34.41 E-value=44 Score=29.60 Aligned_cols=42 Identities=21% Similarity=0.148 Sum_probs=26.5
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 1 MASEGSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 1 m~~~~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|...|+.+ .|+++++..+ |-+ =.++|+.|+++|++|++....
T Consensus 1 M~~~~~l~-gk~~lVTGas-~gI--G~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 1 MSQFMNLE-GKVALVTGAS-RGI--GKAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp -CCTTCCT-TCEEEESSCS-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CccccCCC-CCEEEEeCCC-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 44433333 3666777544 222 257899999999999887654
No 238
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=34.38 E-value=32 Score=32.93 Aligned_cols=39 Identities=10% Similarity=0.012 Sum_probs=28.9
Q ss_pred CCCEEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQG-H---MIPMIDIGRLL-AQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~G-H---i~p~l~LA~~L-~~rGH~Vt~~~~~ 46 (496)
++|||+++..+-.+ | +....+++++| .++||+|+.+...
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 46799988765444 3 33568889999 9999999988643
No 239
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=34.35 E-value=37 Score=31.65 Aligned_cols=40 Identities=23% Similarity=0.158 Sum_probs=25.3
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 1 MASEGSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 1 m~~~~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
|+..|+++. |+++++..+ |-+- ..+|+.|+++|++|++..
T Consensus 1 M~~~~~l~g-k~~lVTGas-~GIG--~~~a~~La~~Ga~Vv~~~ 40 (319)
T 1gz6_A 1 MASPLRFDG-RVVLVTGAG-GGLG--RAYALAFAERGALVVVND 40 (319)
T ss_dssp --CCCCCTT-CEEEETTTT-SHHH--HHHHHHHHHTTCEEEEEC
T ss_pred CCCCCCCCC-CEEEEeCCC-cHHH--HHHHHHHHHCCCEEEEEc
Confidence 666655443 566666443 3222 468999999999999863
No 240
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=34.34 E-value=40 Score=30.88 Aligned_cols=33 Identities=12% Similarity=0.139 Sum_probs=24.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
++|||.|+-.+..|. .+|+.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 457999997766664 468889999999987643
No 241
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=34.17 E-value=27 Score=31.88 Aligned_cols=32 Identities=16% Similarity=0.202 Sum_probs=24.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
+||||.|+-.+..|. .+|+.|.+.||+|+++.
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp --CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 467999997666664 46888999999998665
No 242
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=34.04 E-value=68 Score=24.81 Aligned_cols=38 Identities=13% Similarity=0.245 Sum_probs=24.5
Q ss_pred HHHHhcCCCCeEEEEcCCCc--chHHHHHh-------cCCCeEEEecch
Q 010988 112 NLLKELAPKPSCIVSDMCYP--WTVDTAAR-------FNIPRISFHGFS 151 (496)
Q Consensus 112 ~ll~~~~~~pDlVI~D~~~~--~a~~~A~~-------lgiP~v~~~~~~ 151 (496)
+.++. .+||+||.|...+ .+..+++. -.+|.+.++...
T Consensus 42 ~~~~~--~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 42 QQIYK--NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 34445 6899999997655 34444433 267888876654
No 243
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=34.01 E-value=1.2e+02 Score=26.88 Aligned_cols=34 Identities=21% Similarity=0.042 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|+++++.++ |-+- .++|+.|+++|++|++....
T Consensus 4 ~k~vlVTGas-~gIG--~aia~~l~~~G~~vv~~~~r 37 (258)
T 3oid_A 4 NKCALVTGSS-RGVG--KAAAIRLAENGYNIVINYAR 37 (258)
T ss_dssp CCEEEESSCS-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEecCC-chHH--HHHHHHHHHCCCEEEEEcCC
Confidence 3677777544 3232 57899999999999986443
No 244
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=33.99 E-value=33 Score=31.63 Aligned_cols=29 Identities=14% Similarity=0.295 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
||.|+-.+..|. ++|+.|.++||+|+++-
T Consensus 7 kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred cEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 899998887774 68999999999999763
No 245
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=33.96 E-value=37 Score=31.17 Aligned_cols=39 Identities=8% Similarity=0.024 Sum_probs=23.9
Q ss_pred CCCCCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEE
Q 010988 5 GSSQQPHFVLFPFLAQGHMIP-MIDIGRLLAQNGAAITIV 43 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p-~l~LA~~L~~rGH~Vt~~ 43 (496)
|+.+|.|++++..|..++... ...+.+.|.++|++|.+.
T Consensus 1 m~~~mkki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~ 40 (292)
T 2an1_A 1 MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVE 40 (292)
T ss_dssp ---CCCEEEEECC-------CHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcCcEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEe
Confidence 334567899999887555443 667889999999998865
No 246
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=33.92 E-value=1.6e+02 Score=25.86 Aligned_cols=30 Identities=17% Similarity=0.249 Sum_probs=22.1
Q ss_pred CCCeEEE-EcCCCc-chHHHHHhcCCCeEEEe
Q 010988 119 PKPSCIV-SDMCYP-WTVDTAARFNIPRISFH 148 (496)
Q Consensus 119 ~~pDlVI-~D~~~~-~a~~~A~~lgiP~v~~~ 148 (496)
..||+|| .|+..- -+..=|..+|||.|.+.
T Consensus 156 ~~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaiv 187 (231)
T 3bbn_B 156 GLPDIVIIVDQQEEYTALRECITLGIPTICLI 187 (231)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHTTTCCEEECC
T ss_pred cCCCEEEEeCCccccHHHHHHHHhCCCEEEEe
Confidence 3699986 565443 56677888999999954
No 247
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=33.90 E-value=40 Score=31.35 Aligned_cols=33 Identities=12% Similarity=0.127 Sum_probs=22.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
+|+|++.- +.|-+- ..|++.|.++||+|+.+.-
T Consensus 5 ~~~vlVTG--atG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTG--GAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CcEEEEec--CCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 34665543 333333 4789999999999998864
No 248
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=33.88 E-value=2.1e+02 Score=27.96 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=27.4
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEE
Q 010988 109 PLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISF 147 (496)
Q Consensus 109 ~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~ 147 (496)
+++++++. .+||++|.+.. ...+|+++|||++.+
T Consensus 376 ~l~~~i~~--~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKN--EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHH--SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHh--cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 46677777 79999998853 567899999999974
No 249
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=33.85 E-value=38 Score=30.23 Aligned_cols=38 Identities=24% Similarity=0.227 Sum_probs=30.2
Q ss_pred CEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 10 PHFVLFP--FLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 10 ~~il~~~--~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
+|++.+. -++-|-..=...||..|+++|++|.++=...
T Consensus 2 ~~~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 2 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4554443 3568999999999999999999999986554
No 250
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=33.76 E-value=56 Score=28.76 Aligned_cols=29 Identities=17% Similarity=0.174 Sum_probs=24.0
Q ss_pred ccccccCCChhhHHHHHHhCCcEeccCCcc
Q 010988 362 IGGFLTHCGWNSSLEAISAGVPMITWPLFG 391 (496)
Q Consensus 362 ~~~~I~HGG~gs~~eal~~GvP~v~~P~~~ 391 (496)
++++|+.||........ ..+|+|-++..+
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 44599999999998875 589999999863
No 251
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=33.76 E-value=41 Score=28.90 Aligned_cols=31 Identities=6% Similarity=0.184 Sum_probs=25.3
Q ss_pred ccccccccCCChhhHHHHHHhCCcEeccCCcc
Q 010988 360 PSIGGFLTHCGWNSSLEAISAGVPMITWPLFG 391 (496)
Q Consensus 360 ~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~ 391 (496)
..++++|+.||........ ..+|+|-++..+
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 4455599999999998875 689999999864
No 252
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=33.68 E-value=46 Score=29.79 Aligned_cols=42 Identities=10% Similarity=-0.016 Sum_probs=32.5
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 010988 8 QQPHFVLFPF--LAQGHMIPMIDIGRLLAQNGAAITIVTTPANA 49 (496)
Q Consensus 8 ~~~~il~~~~--~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (496)
+|+|++.+.. ++-|=..-...||..|+++|++|.++=.....
T Consensus 16 ~~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 16 KIKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp TCSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred cCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 3556655544 56899999999999999999999988655443
No 253
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=33.60 E-value=35 Score=30.61 Aligned_cols=34 Identities=15% Similarity=0.076 Sum_probs=27.4
Q ss_pred CEEEEEcCCC--ccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLA--QGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~--~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.+|++++.++ .|+= +.+|+.|+++|++|+++...
T Consensus 59 ~~v~VlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDG---LVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEcC
Confidence 4899999876 4443 78999999999999998653
No 254
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=33.55 E-value=1.3e+02 Score=26.42 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=22.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|.++++..+ |-+- ..++++|+++|++|+++...
T Consensus 14 k~vlItGas-ggiG--~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTGGA-QNIG--LACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-chHH--HHHHHHHHHCCCEEEEEeCC
Confidence 445555333 3232 57899999999999988754
No 255
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=33.55 E-value=1.1e+02 Score=27.01 Aligned_cols=34 Identities=12% Similarity=0.003 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|+++++..+. -+ =.++|+.|+++|++|+++.-.
T Consensus 7 ~k~vlVTGas~-GI--G~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 7 NATVAVIGAGD-YI--GAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp SCEEEEECCSS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEeCC
Confidence 35666665442 22 258899999999999988653
No 256
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=33.52 E-value=17 Score=31.75 Aligned_cols=32 Identities=6% Similarity=0.083 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|||+++-. |.+ -..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECC
Confidence 47777764 333 347899999999999998765
No 257
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=33.31 E-value=2e+02 Score=23.60 Aligned_cols=137 Identities=10% Similarity=0.052 Sum_probs=70.0
Q ss_pred EEEEeeCCccCCChhhHHHHHHHHHhCCCCeEEEEe-CCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhcccc
Q 010988 283 VVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIR-GGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPS 361 (496)
Q Consensus 283 vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~~~-~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~ 361 (496)
.|-|-+||.+. -...+.....++.++..+-..+. -+. .|+.+.+.. .... .+-.
T Consensus 4 ~V~Iimgs~SD--~~v~~~a~~~l~~~gi~~ev~V~saHR----------~p~~~~~~~-----------~~a~--~~~~ 58 (159)
T 3rg8_A 4 LVIILMGSSSD--MGHAEKIASELKTFGIEYAIRIGSAHK----------TAEHVVSML-----------KEYE--ALDR 58 (159)
T ss_dssp EEEEEESSGGG--HHHHHHHHHHHHHTTCEEEEEECCTTT----------CHHHHHHHH-----------HHHH--TSCS
T ss_pred eEEEEECcHHH--HHHHHHHHHHHHHcCCCEEEEEEcccC----------CHHHHHHHH-----------HHhh--hcCC
Confidence 56666777653 44566777788888877644433 333 343322211 0000 0001
Q ss_pred ccccccCCCh----hhHHHHHHhCCcEeccCCcc---ccchhHHHHHHHh--hceEEecccCCCCCCcccccccccCHHH
Q 010988 362 IGGFLTHCGW----NSSLEAISAGVPMITWPLFG---DQFCNEKLIVQVL--NIGVRIGVEVPLDFGEEEEIGVLVKKED 432 (496)
Q Consensus 362 ~~~~I~HGG~----gs~~eal~~GvP~v~~P~~~---DQ~~na~r~~e~~--G~g~~l~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
++++|.=.|. .++.-++ .-+|+|.+|... +..+ -.-++ +. |+.+.--.. .+++.-
T Consensus 59 ~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~v-qmp~GvpVatv~~-------------~~nAa~ 122 (159)
T 3rg8_A 59 PKLYITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSL-RMPSGISPALVLE-------------PKNAAL 122 (159)
T ss_dssp CEEEEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHH-CCCTTCCCEECCS-------------HHHHHH
T ss_pred CcEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHH-hCCCCCceEEecC-------------chHHHH
Confidence 2225554443 3444443 567999999743 2222 22222 22 444332222 467776
Q ss_pred HHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHh
Q 010988 433 VVKAINMLMNEGGERENRRKRAREFQMMAKRAT 465 (496)
Q Consensus 433 l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~ 465 (496)
+...|..+ .|+ .++++.+..+..+.+.+
T Consensus 123 lA~~Il~~-~d~----~l~~kl~~~r~~~~~~v 150 (159)
T 3rg8_A 123 LAARIFSL-YDK----EIADSVKSYMESNAQKI 150 (159)
T ss_dssp HHHHHHTT-TCH----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC-CCH----HHHHHHHHHHHHHHHHH
Confidence 66666543 455 77777777777766544
No 258
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=33.27 E-value=31 Score=29.83 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=25.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.++||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 46789988765555 56789999999999987543
No 259
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=33.26 E-value=32 Score=31.20 Aligned_cols=32 Identities=13% Similarity=-0.046 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|||.|+-.+..| ..+|..|+++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 488888765555 36899999999999998654
No 260
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=33.20 E-value=26 Score=27.63 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=24.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++.||+++.. |.+- ..+++.|.+.|++|+++...
T Consensus 5 ~~~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 5 KNKQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp -CCSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred cCCcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4557887764 4333 45789999999999987654
No 261
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=33.06 E-value=25 Score=31.64 Aligned_cols=43 Identities=19% Similarity=0.219 Sum_probs=35.0
Q ss_pred CCCEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 010988 8 QQPHFVLFPFL---AQGHMIPMIDIGRLLAQNGAAITIVTTPANAA 50 (496)
Q Consensus 8 ~~~~il~~~~~---~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (496)
.+||.+|++.+ +.|-=.-...|+..|..||++||..=.++|.+
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYlN 66 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBCC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCcee
Confidence 46799999976 36777888999999999999999986665543
No 262
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=32.94 E-value=2.4e+02 Score=25.28 Aligned_cols=32 Identities=25% Similarity=0.300 Sum_probs=23.8
Q ss_pred CCCCeEEE-EcCCCc-chHHHHHhcCCCeEEEec
Q 010988 118 APKPSCIV-SDMCYP-WTVDTAARFNIPRISFHG 149 (496)
Q Consensus 118 ~~~pDlVI-~D~~~~-~a~~~A~~lgiP~v~~~~ 149 (496)
...||+|| .|+..- -+..=|..+|||.|.+.-
T Consensus 156 ~~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivD 189 (256)
T 2vqe_B 156 KRLPDAIFVVDPTKEAIAVREARKLFIPVIALAD 189 (256)
T ss_dssp SSCCSEEEESCTTTTHHHHHHHHHTTCCCEECCC
T ss_pred ccCCCEEEEeCCccchHHHHHHHHcCCCEEEEec
Confidence 35899986 565444 677788899999999643
No 263
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=32.87 E-value=2.8e+02 Score=27.39 Aligned_cols=42 Identities=2% Similarity=-0.109 Sum_probs=34.1
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcchhhHH
Q 010988 12 FVLFPFLAQGHMIPMIDIGRLLAQN-GAAITIVTTPANAARFK 53 (496)
Q Consensus 12 il~~~~~~~GHi~p~l~LA~~L~~r-GH~Vt~~~~~~~~~~~~ 53 (496)
+++...|+.|=..=.+.+|..++.+ |..|.+++.+.....+.
T Consensus 245 ~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l~ 287 (503)
T 1q57_A 245 IMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEETA 287 (503)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHHH
T ss_pred EEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHHH
Confidence 4555668899999999999999987 99999999886654443
No 264
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=32.87 E-value=23 Score=33.26 Aligned_cols=36 Identities=8% Similarity=0.054 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+++++|++... .|-+- ..|+++|.++||+|+.+.-.
T Consensus 25 ~~~~~vlVtGa--tG~iG--~~l~~~L~~~g~~V~~~~r~ 60 (352)
T 1sb8_A 25 AQPKVWLITGV--AGFIG--SNLLETLLKLDQKVVGLDNF 60 (352)
T ss_dssp HSCCEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred ccCCeEEEECC--CcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 35677776643 33332 46889999999999988754
No 265
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=32.83 E-value=23 Score=33.17 Aligned_cols=36 Identities=6% Similarity=0.005 Sum_probs=26.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+++++|++.. +.|-+- ..|++.|.++||+|+.+.-.
T Consensus 23 ~~~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 23 FSPKTWLITG--VAGFIG--SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp HSCCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCCCeEEEEC--CCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4567777664 344443 46889999999999998764
No 266
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=32.70 E-value=30 Score=31.77 Aligned_cols=35 Identities=14% Similarity=0.271 Sum_probs=24.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++++|++.- +.|.+- ..|+++|.++||+|+.+.-.
T Consensus 6 ~~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 6 LKHRILITG--GAGFIG--GHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp -CCEEEEET--TTSHHH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCCeEEEEC--CCChHH--HHHHHHHHHCCCEEEEEecC
Confidence 356776664 334333 36889999999999988654
No 267
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=32.60 E-value=29 Score=31.70 Aligned_cols=33 Identities=12% Similarity=0.179 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+||.|+-.+..|. .+|+.|+++||+|+++...
T Consensus 1 M~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 1 MTTYGFLGLGIMGG-----PMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHHHHTCCEEEECSS
T ss_pred CCeEEEEccCHHHH-----HHHHHHHHCCCeEEEEcCC
Confidence 46899997776663 5788999999999987543
No 268
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=32.60 E-value=41 Score=30.39 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=27.1
Q ss_pred CEEEEEcCCC--ccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 10 PHFVLFPFLA--QGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 10 ~~il~~~~~~--~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
.+|++++.++ .|+= +.+|+.|+++|++|+++..
T Consensus 86 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~ 120 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLP 120 (259)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEe
Confidence 4899999876 4443 7899999999999999865
No 269
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=32.60 E-value=25 Score=35.14 Aligned_cols=35 Identities=11% Similarity=0.190 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++||+|.|+-.+..| ..+|..|+++||+|++....
T Consensus 2 ~~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr~ 36 (484)
T 4gwg_A 2 NAQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNRT 36 (484)
T ss_dssp -CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 567899999876665 46799999999999987543
No 270
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=32.59 E-value=26 Score=32.31 Aligned_cols=33 Identities=9% Similarity=0.084 Sum_probs=26.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++||.|+-.+..|. .+|+.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 46899998777664 6899999999999988543
No 271
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=32.59 E-value=20 Score=35.72 Aligned_cols=32 Identities=9% Similarity=0.104 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
|.||+|+-.+--| +.-|..|+++||+|+++--
T Consensus 1 Mk~VvVIGaG~~G-----L~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 1 MKPTTVIGAGFGG-----LALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CCCEEEECCHHHH-----HHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEECCcHHH-----HHHHHHHHHCCCcEEEEcc
Confidence 5578888655444 6668889999999999854
No 272
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=32.35 E-value=77 Score=32.00 Aligned_cols=108 Identities=13% Similarity=0.138 Sum_probs=58.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCCccc
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSENFD 88 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~~~~ 88 (496)
..++++...- =.-++.+|+.|.+.|+++. .+......+++. |+.+..+. ...++|+....--
T Consensus 5 ~G~aLISV~D----K~~iv~lAk~L~~lGf~I~--ATgGTAk~L~e~---------GI~v~~V~---k~TgfPE~l~GRV 66 (593)
T 1g8m_A 5 QQLALLSVSE----KAGLVEFARSLNALGLGLI--ASGGTATALRDA---------GLPVRDVS---DLTGFPEMLGGRV 66 (593)
T ss_dssp CCEEEEEESC----CTTHHHHHHHHHHTTCEEE--ECHHHHHHHHHT---------TCCCEEHH---HHHSCCCBGGGTB
T ss_pred CCEEEEEEeC----cHhHHHHHHHHHHCCCEEE--EchHHHHHHHHC---------CCeEEEee---cccCCchhhcCCc
Confidence 4566666543 3447899999999999875 555555555553 56666653 1134555432221
Q ss_pred CCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHH
Q 010988 89 MLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYPWTVDTA 137 (496)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~~a~~~A 137 (496)
..-.......++. ......+.++-+.--...|+||+. +++.-..++
T Consensus 67 KTLHP~ihgGiLa--r~~~~h~~~l~~~~I~~iDlVvvN-LYPF~~tva 112 (593)
T 1g8m_A 67 KTLHPAVHAGILA--RNIPEDNADMNKQDFSLVRVVVCN-LYPFVKTVS 112 (593)
T ss_dssp SSCSHHHHHHHHC--CSSHHHHHHHHHTTCCCEEEEEEE-CCCHHHHHT
T ss_pred cccCchhhhhhcc--CCCHHHHHHHHHcCCCceeEEEEe-ccCHHHhhc
Confidence 1112233333333 222333333333222578999998 565444443
No 273
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=32.29 E-value=33 Score=31.98 Aligned_cols=38 Identities=3% Similarity=-0.083 Sum_probs=28.1
Q ss_pred CE-EEEEcCCCccCH--------------HHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 10 PH-FVLFPFLAQGHM--------------IPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 10 ~~-il~~~~~~~GHi--------------~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
.| |++...|+.=.+ ..=.+||+++.++|++||++..+.
T Consensus 37 k~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 37 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp CCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 35 666666665444 145678999999999999998764
No 274
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=32.28 E-value=32 Score=28.24 Aligned_cols=36 Identities=11% Similarity=0.214 Sum_probs=28.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
.-+++++..+. | +.|++++++.|.++|.+|+++ ...
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r 58 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVT 58 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EEC
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 34777777444 3 999999999999999999998 543
No 275
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=32.25 E-value=38 Score=29.61 Aligned_cols=37 Identities=14% Similarity=0.080 Sum_probs=25.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
++.|+|++.- +.|.+- ..|+++|.++||+|+.+.-..
T Consensus 19 l~~~~ilVtG--atG~iG--~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVVG--ANGKVA--RYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp --CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCeEEEEC--CCChHH--HHHHHHHHhCCCeEEEEECCh
Confidence 4567776664 333333 468899999999999987653
No 276
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=32.23 E-value=49 Score=27.40 Aligned_cols=37 Identities=22% Similarity=0.281 Sum_probs=22.6
Q ss_pred CCCCCEEEEEcCC----CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 6 SSQQPHFVLFPFL----AQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 6 ~~~~~~il~~~~~----~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|++|||+++++.- ..||+ .++++.++.+.+|.++...
T Consensus 1 ~~~mm~i~i~~GsFDPiH~GHl----~li~~A~~~~d~viv~v~~ 41 (162)
T 4f3r_A 1 SNAMKPIAIYPGTFDPLTNGHV----DIIERALPLFNKIIVACAP 41 (162)
T ss_dssp ----CCEEEEEECCTTCCHHHH----HHHHHHGGGCSEEEEEECC
T ss_pred CCCceEEEEEEEEcCCCCHHHH----HHHHHHHHHCCcEEEEEec
Confidence 3567899888853 36664 5666666667788776654
No 277
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=32.13 E-value=14 Score=34.35 Aligned_cols=34 Identities=3% Similarity=-0.059 Sum_probs=25.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
|++.+|+++-.+..| +..|..|+++|++|+++-.
T Consensus 6 ~~~~~vvIIG~G~aG-----l~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 6 THNTRLCIVGSGPAA-----HTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEEECCSHHH-----HHHHHHHHHTTCCCEEECC
T ss_pred CCCCCEEEECcCHHH-----HHHHHHHHHCCCeEEEEec
Confidence 445678887765444 6678889999999999875
No 278
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=32.02 E-value=37 Score=29.23 Aligned_cols=34 Identities=9% Similarity=0.047 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|||++.- +.|-+- ..++++|.++||+|+.+.-..
T Consensus 1 M~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIVG--STGRVG--KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CEEEEES--TTSHHH--HHHHHHHTTSSCEEEEEESSG
T ss_pred CeEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECCc
Confidence 4776664 333333 578999999999999987653
No 279
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=31.93 E-value=1.3e+02 Score=27.09 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+.|+++++.++.| + =.++|++|+++|++|+++.-.
T Consensus 23 ~~k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 23 RPQTAFVTGVSSG-I--GLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp --CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 3467778765432 2 257899999999999877654
No 280
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=31.90 E-value=40 Score=31.90 Aligned_cols=38 Identities=11% Similarity=0.113 Sum_probs=22.4
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 6 SSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 6 ~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+.+|++.++++ ++.|-+- ..|+++|.++||+|+.+.-.
T Consensus 20 ~~~M~~~vlVt-GatG~iG--~~l~~~L~~~g~~V~~~~r~ 57 (375)
T 1t2a_A 20 QGHMRNVALIT-GITGQDG--SYLAEFLLEKGYEVHGIVRR 57 (375)
T ss_dssp ----CCEEEEE-TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred HhhcCcEEEEE-CCCchHH--HHHHHHHHHCCCEEEEEECC
Confidence 34553434444 3334333 46789999999999988754
No 281
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=31.89 E-value=50 Score=27.78 Aligned_cols=41 Identities=7% Similarity=0.113 Sum_probs=29.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHH-HHHHHHh-CCCeEEEEeCCc
Q 010988 7 SQQPHFVLFPFLAQGHMIPMID-IGRLLAQ-NGAAITIVTTPA 47 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~-LA~~L~~-rGH~Vt~~~~~~ 47 (496)
..||||+++-....|+..-+.. +++.|.+ .|++|.++....
T Consensus 2 ~~M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~ 44 (188)
T 2ark_A 2 NAMGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDE 44 (188)
T ss_dssp CCCEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTT
T ss_pred CCCCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhh
Confidence 3477888877656787766544 5677777 899998886543
No 282
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=31.83 E-value=72 Score=27.55 Aligned_cols=48 Identities=8% Similarity=-0.062 Sum_probs=33.1
Q ss_pred hhhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEEE
Q 010988 269 SECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWV 316 (496)
Q Consensus 269 ~~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~ 316 (496)
+-+.+|+.....+.++||..+|......+.+....+||++++..+.+.
T Consensus 16 ~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 16 PLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 344556543334569999988765444556788899999999876553
No 283
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=31.82 E-value=1.7e+02 Score=28.63 Aligned_cols=151 Identities=10% Similarity=-0.012 Sum_probs=71.1
Q ss_pred ccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEE--eCcc
Q 010988 274 WLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILI--LGWA 351 (496)
Q Consensus 274 ~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v--~~~~ 351 (496)
|++-. .+.++.|..|.... ..++.|.+.+.++.+.-.... +.+.......++.+ ..|-
T Consensus 7 ~~~l~-~~~vlVvGgG~va~-------~k~~~L~~~ga~V~vi~~~~~------------~~~~~l~~~~~i~~~~~~~~ 66 (457)
T 1pjq_A 7 FCQLR-DRDCLIVGGGDVAE-------RKARLLLEAGARLTVNALTFI------------PQFTVWANEGMLTLVEGPFD 66 (457)
T ss_dssp EECCB-TCEEEEECCSHHHH-------HHHHHHHHTTBEEEEEESSCC------------HHHHHHHTTTSCEEEESSCC
T ss_pred EEECC-CCEEEEECCCHHHH-------HHHHHHHhCcCEEEEEcCCCC------------HHHHHHHhcCCEEEEECCCC
Confidence 44433 45688888877532 233444556777766543321 12222112234432 2332
Q ss_pred hhhhhhccccccccccCCChhh-----HHHHHHhCCcE--eccCCccccchhHHHHHHHhhceEEecccCCCCCCccccc
Q 010988 352 PQVLILSHPSIGGFLTHCGWNS-----SLEAISAGVPM--ITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEI 424 (496)
Q Consensus 352 pq~~~l~~~~~~~~I~HGG~gs-----~~eal~~GvP~--v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~ 424 (496)
+ ..|..+++ +|.--|.-. ..+|-..|+|+ +--|-..+...-+..-...+-+|+. .+ ++
T Consensus 67 ~--~~l~~~~l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa~~~~~~l~iaIs--T~---------Gk 131 (457)
T 1pjq_A 67 E--TLLDSCWL--AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPSIIDRSPLMVAVS--SG---------GT 131 (457)
T ss_dssp G--GGGTTCSE--EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCEEEEETTEEEEEE--CT---------TS
T ss_pred c--cccCCccE--EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeeeEEEeCCeEEEEE--CC---------CC
Confidence 2 33444454 777777654 44566778887 4334334433211000002233444 32 01
Q ss_pred ccccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH
Q 010988 425 GVLVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAK 462 (496)
Q Consensus 425 ~~~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~ 462 (496)
+ ..-+..|++.|.+.|.+ ....+-+.+.++++.++
T Consensus 132 s-p~la~~ir~~ie~~l~~--~~~~~~~~~~~~R~~~~ 166 (457)
T 1pjq_A 132 S-PVLARLLREKLESLLPQ--HLGQVARYAGQLRARVK 166 (457)
T ss_dssp C-HHHHHHHHHHHHHHSCT--THHHHHHHHHHHHHHHH
T ss_pred C-hHHHHHHHHHHHHhcch--hHHHHHHHHHHHHHHHH
Confidence 1 22356788888888753 22244444445544444
No 284
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=31.78 E-value=45 Score=30.94 Aligned_cols=38 Identities=11% Similarity=0.228 Sum_probs=28.7
Q ss_pred CCEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIP-MIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p-~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|.||+++..+..++... ...+.+.|.++|++|.+....
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~ 42 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAE 42 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC--
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecch
Confidence 56899999988776544 678899999999998876544
No 285
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=31.76 E-value=45 Score=30.95 Aligned_cols=35 Identities=14% Similarity=0.354 Sum_probs=24.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++|||++.- +.|.+- ..|++.|.++||+|+.+.-.
T Consensus 12 ~~M~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVLG--ATGLLG--HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEES--TTSHHH--HHHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEEC--CCcHHH--HHHHHHHHHCCCEEEEEecC
Confidence 356877664 334333 46789999999999988754
No 286
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=31.74 E-value=57 Score=25.58 Aligned_cols=38 Identities=13% Similarity=0.259 Sum_probs=24.2
Q ss_pred HHHHhcCCCCeEEEEcCCCc--chHHHHHhc---------CCCeEEEecch
Q 010988 112 NLLKELAPKPSCIVSDMCYP--WTVDTAARF---------NIPRISFHGFS 151 (496)
Q Consensus 112 ~ll~~~~~~pDlVI~D~~~~--~a~~~A~~l---------giP~v~~~~~~ 151 (496)
+.++. .+||+||.|...+ .+..+++.+ .+|.+.++...
T Consensus 52 ~~~~~--~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 52 DAMAE--EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp HHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred HHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 34455 6899999997655 344554433 37888776543
No 287
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=31.58 E-value=42 Score=31.01 Aligned_cols=34 Identities=12% Similarity=0.133 Sum_probs=23.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
||+|++.-. .|-+- ..|+++|.++||+|+.+...
T Consensus 1 M~~ilVtGa--tG~iG--~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 1 MNSILICGG--AGYIG--SHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp -CEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEECC--CcHHH--HHHHHHHHhCCCEEEEEeCC
Confidence 457766543 33332 57889999999999988643
No 288
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=31.51 E-value=47 Score=30.12 Aligned_cols=34 Identities=21% Similarity=0.100 Sum_probs=27.6
Q ss_pred CEEEEEcCCC--ccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLA--QGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~--~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.+|++++.++ .|+= +.+|+.|+++|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDG---LVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEeC
Confidence 4899999876 4443 78999999999999998654
No 289
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=31.36 E-value=47 Score=33.02 Aligned_cols=36 Identities=11% Similarity=0.012 Sum_probs=29.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CC-eEEEEeCCc
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQN-GA-AITIVTTPA 47 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~r-GH-~Vt~~~~~~ 47 (496)
+++|||.++-.+..| +.+|..|+++ || +|+++-...
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 467899999877777 5789999999 99 999886543
No 290
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=31.24 E-value=1.8e+02 Score=25.66 Aligned_cols=34 Identities=15% Similarity=0.254 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
-|+++++..+.| +- .++|++|+++|++|+++.-.
T Consensus 11 ~k~vlVTGas~g-IG--~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 11 DKVVVISGVGPA-LG--TTLARRCAEQGADLVLAART 44 (264)
T ss_dssp TCEEEEESCCTT-HH--HHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEECCCcH-HH--HHHHHHHHHCcCEEEEEeCC
Confidence 367777755432 22 57899999999999887653
No 291
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=31.13 E-value=43 Score=32.01 Aligned_cols=38 Identities=11% Similarity=-0.030 Sum_probs=28.3
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|+.+++||+++..+ . -...+++++.+.|++|..+....
T Consensus 7 m~~~~~~ili~g~g---~--~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 7 LRPAATRVMLLGSG---E--LGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp TSTTCCEEEEESCS---H--HHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCCCCEEEEECCC---H--HHHHHHHHHHHcCCEEEEEECCC
Confidence 44567899998543 2 34678999999999998887653
No 292
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=31.04 E-value=1.6e+02 Score=26.03 Aligned_cols=34 Identities=12% Similarity=0.083 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|+++++..+.| +- .++|++|+++|++|+++...
T Consensus 8 ~k~vlVTGas~G-IG--~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 8 NRTIVVAGAGRD-IG--RACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp TCEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEECS
T ss_pred CCEEEEECCCch-HH--HHHHHHHHHCCCEEEEEcCC
Confidence 356677754432 32 57899999999999987543
No 293
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=30.98 E-value=1.4e+02 Score=25.85 Aligned_cols=102 Identities=15% Similarity=0.014 Sum_probs=51.9
Q ss_pred hhccccCCCCCCeEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeC
Q 010988 270 ECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILG 349 (496)
Q Consensus 270 ~~~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~ 349 (496)
++-++|..++ ..+||.|.... ......++....+-++|=++.... .. .+ ++. . ......+..
T Consensus 36 ~lg~~LA~~G---~~vVsGGg~~G----iM~aa~~gAl~~GG~tiGVlP~~~-~~---~e--~~~----~-~~~~~~~~~ 97 (215)
T 2a33_A 36 DLGNELVSRN---IDLVYGGGSIG----LMGLVSQAVHDGGRHVIGIIPKTL-MP---RE--LTG----E-TVGEVRAVA 97 (215)
T ss_dssp HHHHHHHHTT---CEEEECCCSSH----HHHHHHHHHHHTTCCEEEEEESSC-C------------------CCEEEEES
T ss_pred HHHHHHHHCC---CEEEECCChhh----HhHHHHHHHHHcCCcEEEEcchHh-cc---hh--hcc----C-CCCceeecC
Confidence 3444554432 55566655322 333444444445556666655443 10 01 110 0 012345556
Q ss_pred cchh-hhhhccccccccccCCChhhHHHHHH---------hCCcEeccCC
Q 010988 350 WAPQ-VLILSHPSIGGFLTHCGWNSSLEAIS---------AGVPMITWPL 389 (496)
Q Consensus 350 ~~pq-~~~l~~~~~~~~I~HGG~gs~~eal~---------~GvP~v~~P~ 389 (496)
..+. +.++..-+-..++--||.||+-|... +++|++++-.
T Consensus 98 ~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 98 DMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp SHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred CHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 6664 33443333335777899999988762 4899998865
No 294
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=30.89 E-value=45 Score=33.20 Aligned_cols=40 Identities=15% Similarity=0.116 Sum_probs=27.7
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeC
Q 010988 1 MASEGSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTT 45 (496)
Q Consensus 1 m~~~~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~ 45 (496)
|.+..++++|||.|+-.+..|. .+|..|+++ ||+|+++-.
T Consensus 1 m~~~~~~~~mkI~VIG~G~vG~-----~~A~~La~~g~g~~V~~~D~ 42 (481)
T 2o3j_A 1 MTDQVFGKVSKVVCVGAGYVGG-----PTCAMIAHKCPHITVTVVDM 42 (481)
T ss_dssp --CCSSCCCCEEEEECCSTTHH-----HHHHHHHHHCTTSEEEEECS
T ss_pred CCCCCCCCCCEEEEECCCHHHH-----HHHHHHHhcCCCCEEEEEEC
Confidence 4443345678999997766663 567888888 799998753
No 295
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=30.77 E-value=41 Score=29.52 Aligned_cols=40 Identities=13% Similarity=0.034 Sum_probs=31.4
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHhC-CCeEEEEeCCc
Q 010988 8 QQPHFVLFPF--LAQGHMIPMIDIGRLLAQN-GAAITIVTTPA 47 (496)
Q Consensus 8 ~~~~il~~~~--~~~GHi~p~l~LA~~L~~r-GH~Vt~~~~~~ 47 (496)
+++|++.+.. ++-|-..-...||..|+++ |++|.++=...
T Consensus 2 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~ 44 (245)
T 3ea0_A 2 NAKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISL 44 (245)
T ss_dssp -CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCT
T ss_pred CCCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 3556655543 6799999999999999999 99999986553
No 296
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=30.67 E-value=37 Score=31.82 Aligned_cols=37 Identities=11% Similarity=0.081 Sum_probs=24.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|++++|++... .|.+- ..|+++|.++||+|+.++-..
T Consensus 8 M~~~~IlVtGa--tG~iG--~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGA--TGFIG--QFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECT--TSHHH--HHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECC--CcHHH--HHHHHHHHHCCCCEEEEECCC
Confidence 44567776653 34333 467899999999999998754
No 297
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=30.63 E-value=50 Score=29.59 Aligned_cols=40 Identities=18% Similarity=0.192 Sum_probs=28.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAA 50 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (496)
|||||+.-==+. +---+..|+++|.+.| +|+++++...+.
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~S 40 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLS 40 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCT
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCcc
Confidence 478877653222 3344888999999988 999999986655
No 298
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=30.60 E-value=30 Score=33.03 Aligned_cols=35 Identities=17% Similarity=0.162 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|++|||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 456899999765555 46789999999999987543
No 299
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=30.55 E-value=1.5e+02 Score=26.16 Aligned_cols=33 Identities=21% Similarity=0.006 Sum_probs=22.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|.++++..+ |-+- ..++++|+++|++|+++...
T Consensus 15 k~vlITGas-ggiG--~~la~~l~~~G~~V~~~~r~ 47 (266)
T 1xq1_A 15 KTVLVTGGT-KGIG--HAIVEEFAGFGAVIHTCARN 47 (266)
T ss_dssp CEEEETTTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 455666433 3232 57899999999999988654
No 300
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=30.54 E-value=28 Score=32.74 Aligned_cols=39 Identities=8% Similarity=0.028 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQG-H---MIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~G-H---i~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+++||+++..+..+ | +.....++++|.+.||+|+.+...
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 46799888744222 2 225667899999999999988643
No 301
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=30.46 E-value=23 Score=32.58 Aligned_cols=27 Identities=15% Similarity=-0.002 Sum_probs=22.9
Q ss_pred cccccCCChhhHHHHHHh----CCcEeccCC
Q 010988 363 GGFLTHCGWNSSLEAISA----GVPMITWPL 389 (496)
Q Consensus 363 ~~~I~HGG~gs~~eal~~----GvP~v~~P~ 389 (496)
+++|.-||=||+.+++.. ++|++.++.
T Consensus 65 D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 65 DLAVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp SEEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred CEEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 449999999999999843 789999984
No 302
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=30.35 E-value=52 Score=29.63 Aligned_cols=33 Identities=15% Similarity=0.097 Sum_probs=25.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++..+.| + =.++|+.|+++|++|.+..-.
T Consensus 12 K~alVTGas~G-I--G~aia~~la~~Ga~V~~~~r~ 44 (261)
T 4h15_A 12 KRALITAGTKG-A--GAATVSLFLELGAQVLTTARA 44 (261)
T ss_dssp CEEEESCCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeccCcH-H--HHHHHHHHHHcCCEEEEEECC
Confidence 78888876643 2 267899999999999887643
No 303
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=30.29 E-value=61 Score=27.29 Aligned_cols=38 Identities=16% Similarity=0.377 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCccCHHHHHH-HHHHHHh-CCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMID-IGRLLAQ-NGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~-LA~~L~~-rGH~Vt~~~~~ 46 (496)
||||+++-....|+..-+.. +++.|.+ .|++|.++-..
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~ 40 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVP 40 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECC
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEcc
Confidence 46887777656787766544 5666766 79999887654
No 304
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=30.27 E-value=73 Score=23.89 Aligned_cols=40 Identities=20% Similarity=0.429 Sum_probs=25.2
Q ss_pred HHHHHhcCCCCeEEEEcCCCc--chHHHHH----hcCCCeEEEecchH
Q 010988 111 ENLLKELAPKPSCIVSDMCYP--WTVDTAA----RFNIPRISFHGFSC 152 (496)
Q Consensus 111 ~~ll~~~~~~pDlVI~D~~~~--~a~~~A~----~lgiP~v~~~~~~~ 152 (496)
.+.++. .+||+||.|...+ .+..+++ ..++|.+.++....
T Consensus 39 l~~~~~--~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~ 84 (120)
T 3f6p_A 39 VEMVEE--LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDS 84 (120)
T ss_dssp HHHHHT--TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSC
T ss_pred HHHHhh--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCC
Confidence 344455 6899999997655 3333433 24788887765443
No 305
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=30.26 E-value=1.7e+02 Score=28.37 Aligned_cols=32 Identities=13% Similarity=0.123 Sum_probs=23.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.||+++. .| .....+++++.+.|++|+++.+.
T Consensus 2 k~ilI~g---~g--~~~~~i~~a~~~~G~~vv~v~~~ 33 (451)
T 2vpq_A 2 KKVLIAN---RG--EIAVRIIRACRDLGIQTVAIYSE 33 (451)
T ss_dssp CEEEECC---CH--HHHHHHHHHHHHTTCEEEEEEEG
T ss_pred ceEEEeC---CC--HHHHHHHHHHHHcCCEEEEEecc
Confidence 4677664 22 24567899999999999988754
No 306
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=30.10 E-value=55 Score=29.14 Aligned_cols=33 Identities=18% Similarity=0.140 Sum_probs=22.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|.++++.. .|-+- ..+++.|+++|++|+++.-.
T Consensus 13 k~vlVTGa-s~gIG--~~ia~~l~~~G~~V~~~~r~ 45 (263)
T 3ak4_A 13 RKAIVTGG-SKGIG--AAIARALDKAGATVAIADLD 45 (263)
T ss_dssp CEEEEETT-TSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCC-CChHH--HHHHHHHHHCCCEEEEEeCC
Confidence 44555533 33332 46899999999999987654
No 307
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=30.05 E-value=31 Score=34.47 Aligned_cols=37 Identities=14% Similarity=0.121 Sum_probs=26.4
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+|+.+||.|+-.+..| ..||..|+++||+|++.-..
T Consensus 1 Msm~~~kVgVIGaG~MG-----~~IA~~la~aG~~V~l~D~~ 37 (483)
T 3mog_A 1 MSLNVQTVAVIGSGTMG-----AGIAEVAASHGHQVLLYDIS 37 (483)
T ss_dssp ---CCCCEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCCCCEEEEECcCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 44667799998655455 46888999999999987543
No 308
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=30.03 E-value=47 Score=30.92 Aligned_cols=36 Identities=14% Similarity=0.235 Sum_probs=24.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+++++|++.. +.|-+- ..|+++|.++||+|+.+.-.
T Consensus 25 ~~~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 25 KDRKRILITG--GAGFVG--SHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp --CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEEc--CccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4567776664 334333 46789999999999988753
No 309
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=30.02 E-value=73 Score=29.65 Aligned_cols=32 Identities=13% Similarity=0.025 Sum_probs=22.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
|+++++..+ |-+- ..+|++|+++|++|+...-
T Consensus 6 k~vlVTGas-~GIG--~aia~~L~~~G~~V~~~~r 37 (324)
T 3u9l_A 6 KIILITGAS-SGFG--RLTAEALAGAGHRVYASMR 37 (324)
T ss_dssp CEEEESSCS-SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHH--HHHHHHHHHCCCEEEEecC
Confidence 566676544 3232 4789999999999987653
No 310
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=30.00 E-value=1.1e+02 Score=27.52 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=27.5
Q ss_pred CEEEEEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCcchhhH
Q 010988 10 PHFVLFPFLAQ-GHMIPMIDIGRLLAQNGAAITIVTTPANAARF 52 (496)
Q Consensus 10 ~~il~~~~~~~-GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (496)
.|+++++..+. +-+- .++|+.|+++|++|+++......+.+
T Consensus 26 ~k~vlVTGasg~~GIG--~~ia~~l~~~G~~V~~~~r~~~~~~~ 67 (280)
T 3nrc_A 26 GKKILITGLLSNKSIA--YGIAKAMHREGAELAFTYVGQFKDRV 67 (280)
T ss_dssp TCEEEECCCCSTTCHH--HHHHHHHHHTTCEEEEEECTTCHHHH
T ss_pred CCEEEEECCCCCCCHH--HHHHHHHHHcCCEEEEeeCchHHHHH
Confidence 46777776431 1222 57899999999999988766533333
No 311
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=29.98 E-value=43 Score=30.60 Aligned_cols=34 Identities=12% Similarity=0.139 Sum_probs=24.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|++|+++. +.|.+- ..|+++|.++||+|+.++-.
T Consensus 4 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVG--GTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEES--TTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEEc--CCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 56776664 334442 46789999999999988765
No 312
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=29.93 E-value=40 Score=31.44 Aligned_cols=71 Identities=13% Similarity=0.074 Sum_probs=38.4
Q ss_pred HHHhhcCCceEEeCcCcCCCcCCchhhhhCCCCcCChhhhccccCCCCCCeEEEEeeCCcc---CCChhhHHHHHHHHHh
Q 010988 232 EYKKTKGGKVWCLGPVSLCNKQDIDKAERGKKAAIDVSECLNWLDSWPPNSVVYVCLGSIC---NLTSSQMIELGLGLEA 308 (496)
Q Consensus 232 ~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vI~vs~GS~~---~~~~~~~~~~~~a~~~ 308 (496)
......|.++..+|-+.+..... .-.++..+++..+-+++- +|+.. ......+..+.+.+++
T Consensus 102 ~~~~~~p~r~~~~~~l~~~~~~~------------a~~el~~~~~~~g~~Gv~---l~~~~~~~~l~d~~~~~~~~~~~e 166 (336)
T 2wm1_A 102 STVVSYPRRFVGLGTLPMQAPEL------------AVKEMERCVKELGFPGVQ---IGTHVNEWDLNAQELFPVYAAAER 166 (336)
T ss_dssp HHHHHSTTTEEEEECCCTTSHHH------------HHHHHHHHHHTSCCSEEE---EESEETTEETTCGGGHHHHHHHHH
T ss_pred HHHHhccCceeEEEeCCCcCHHH------------HHHHHHHHHHccCCeEEE---ECCcCCCCCCCCccHHHHHHHHHH
Confidence 34445556677776554331100 135566666443334443 33332 2344568888888888
Q ss_pred CCCCeEEEE
Q 010988 309 SKKPFIWVI 317 (496)
Q Consensus 309 ~~~~~i~~~ 317 (496)
.+..+++=.
T Consensus 167 ~~lpv~iH~ 175 (336)
T 2wm1_A 167 LKCSLFVHP 175 (336)
T ss_dssp HTCEEEEEC
T ss_pred cCCEEEECC
Confidence 887766543
No 313
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=29.85 E-value=37 Score=31.59 Aligned_cols=35 Identities=14% Similarity=0.047 Sum_probs=21.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++++|+ ++ ++.|-+- ..|+++|.++||+|+.+.-.
T Consensus 4 ~~~~vl-VT-GatGfIG--~~l~~~L~~~G~~V~~~~r~ 38 (337)
T 2c29_D 4 QSETVC-VT-GASGFIG--SWLVMRLLERGYTVRATVRD 38 (337)
T ss_dssp --CEEE-ET-TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEE-EE-CCchHHH--HHHHHHHHHCCCEEEEEECC
Confidence 344554 44 3444443 46789999999999876543
No 314
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=29.79 E-value=44 Score=30.46 Aligned_cols=34 Identities=9% Similarity=0.136 Sum_probs=23.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|++|+++.. .|.+- ..|+++|.++||+|+.++-.
T Consensus 4 ~~~ilVtGa--tG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLIGA--TGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEEST--TSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEEEcC--CcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 457766643 33332 36789999999999987654
No 315
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=29.76 E-value=68 Score=28.92 Aligned_cols=33 Identities=18% Similarity=0.082 Sum_probs=22.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++..+ |-+ =..+|+.|+++|++|+++.-.
T Consensus 30 k~vlVTGas-~gI--G~aia~~L~~~G~~V~~~~r~ 62 (276)
T 2b4q_A 30 RIALVTGGS-RGI--GQMIAQGLLEAGARVFICARD 62 (276)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEeCCC-ChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 455565433 323 246899999999999887543
No 316
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=29.73 E-value=35 Score=29.91 Aligned_cols=34 Identities=21% Similarity=0.126 Sum_probs=22.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNG-AAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rG-H~Vt~~~~~ 46 (496)
||.++++ ++.|-+- ..|+++|+++| |+|+.+.-.
T Consensus 23 mk~vlVt-GatG~iG--~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 23 MKNVLIL-GAGGQIA--RHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp CEEEEEE-TTTSHHH--HHHHHHHTTCTTEEEEEEESS
T ss_pred ccEEEEE-eCCcHHH--HHHHHHHHhCCCceEEEEEcC
Confidence 4544554 3333333 57899999999 999988754
No 317
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=29.70 E-value=38 Score=30.01 Aligned_cols=22 Identities=23% Similarity=0.184 Sum_probs=19.1
Q ss_pred HHHHHHHHHhCCCeEEEEeCCc
Q 010988 26 MIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 26 ~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
=.+||++|+++|++|+++..+.
T Consensus 32 G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 32 GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHCCCEEEEEeCCc
Confidence 3578999999999999998874
No 318
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=29.59 E-value=37 Score=31.78 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=27.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|||.|+-.+..| ..+|..|++.||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 4799999877666 57899999999999988654
No 319
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=29.55 E-value=73 Score=27.23 Aligned_cols=39 Identities=10% Similarity=0.169 Sum_probs=27.8
Q ss_pred CCCEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMID-IGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~-LA~~L~~rGH~Vt~~~~~ 46 (496)
+||||+++-.-..|+..-+.. +++.|.+.|++|.++-..
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 578988777655787666544 466777789999887654
No 320
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=29.38 E-value=94 Score=25.85 Aligned_cols=39 Identities=10% Similarity=0.066 Sum_probs=31.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|..+.|+...+.|-..=+..|++.|.++|++|..+....
T Consensus 4 ~~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 4 MNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 444556665678999989999999999999999888653
No 321
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=29.33 E-value=35 Score=31.93 Aligned_cols=35 Identities=11% Similarity=0.100 Sum_probs=26.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+++.||.|+-.+..| ..+|..|+++||+|+++-..
T Consensus 4 ~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 467799999776666 47889999999999988554
No 322
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=29.29 E-value=1.5e+02 Score=25.86 Aligned_cols=33 Identities=18% Similarity=0.200 Sum_probs=23.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++..+ |-+ =..+|++|+++|++|+++...
T Consensus 10 k~vlITGas-~gi--G~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 10 KVGIVTGSG-GGI--GQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEcCC
Confidence 556666443 322 257899999999999887654
No 323
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=29.19 E-value=47 Score=30.80 Aligned_cols=34 Identities=12% Similarity=0.103 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.++|++.. +.|.+- ..|+++|.++||+|+.+.-.
T Consensus 3 ~~~vlVtG--atG~iG--~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 3 GKRALITG--IRGQDG--AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEEC--CCChHH--HHHHHHHHHCCCEEEEEECC
Confidence 45666653 334333 46789999999999988654
No 324
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=29.18 E-value=50 Score=30.58 Aligned_cols=36 Identities=8% Similarity=0.122 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.+.|+|++.- +.|.+- ..|+++|.++||+|+.+.-.
T Consensus 18 ~~~~~vlVTG--asG~iG--~~l~~~L~~~g~~V~~~~r~ 53 (330)
T 2pzm_A 18 GSHMRILITG--GAGCLG--SNLIEHWLPQGHEILVIDNF 53 (330)
T ss_dssp TTCCEEEEET--TTSHHH--HHHHHHHGGGTCEEEEEECC
T ss_pred CCCCEEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 4567776664 334333 56899999999999988753
No 325
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=29.11 E-value=55 Score=24.98 Aligned_cols=39 Identities=13% Similarity=0.062 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCCccCHHHHH-HHHHHHHhCCCe-EEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMI-DIGRLLAQNGAA-ITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l-~LA~~L~~rGH~-Vt~~~~~ 46 (496)
+|+||+++|..+.|.-.-+. .|-+.+.++|.+ +.+-..+
T Consensus 17 ~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~~ 57 (110)
T 3czc_A 17 SMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCS 57 (110)
T ss_dssp -CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEee
Confidence 46789999999999888877 777888889988 6654444
No 326
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=29.05 E-value=1.8e+02 Score=25.81 Aligned_cols=33 Identities=9% Similarity=-0.067 Sum_probs=22.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|.++++..+ |-+ =..+++.|+++|++|+++.-.
T Consensus 32 k~vlITGas-ggI--G~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 32 EIVLITGAG-HGI--GRLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-chH--HHHHHHHHHHCCCEEEEEEcC
Confidence 445555333 222 257899999999999987754
No 327
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=28.98 E-value=1.1e+02 Score=27.44 Aligned_cols=34 Identities=24% Similarity=0.226 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|+++++..+ |-+- .++|+.|+++|++|+++.-.
T Consensus 4 ~k~~lVTGas-~GIG--~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 4 DKVILITGAS-GGIG--EGIARELGVAGAKILLGARR 37 (264)
T ss_dssp TCEEEESSTT-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCc-cHHH--HHHHHHHHHCCCEEEEEECC
Confidence 4677777554 2222 57899999999999987644
No 328
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=28.95 E-value=16 Score=36.23 Aligned_cols=34 Identities=18% Similarity=0.204 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+.|||+++..+-.|. .||+.|.+.||+|+++-..
T Consensus 2 ~~M~iiI~G~G~vG~-----~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVGG-----TLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEECCCHHHH-----HHHHHHHHCCCCEEEEECC
Confidence 457999988776663 5899999999999988654
No 329
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=28.87 E-value=26 Score=33.42 Aligned_cols=39 Identities=5% Similarity=0.102 Sum_probs=27.4
Q ss_pred CCCEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQG-H---MIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~G-H---i~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+++||+++..+..+ | +.....++++|.++||+|+.+...
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 46799888854322 2 234477899999999999988644
No 330
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=28.78 E-value=43 Score=30.13 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
||||++.- + |.+-. .|+++|.++||+|+.++-..
T Consensus 5 ~~~ilVtG--a-G~iG~--~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFG--H-GYTAR--VLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEET--C-CHHHH--HHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEEC--C-cHHHH--HHHHHHHHCCCEEEEEEcCh
Confidence 45777664 5 66553 67899999999999987654
No 331
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=28.60 E-value=62 Score=29.94 Aligned_cols=34 Identities=9% Similarity=0.220 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-C-CeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQN-G-AAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~r-G-H~Vt~~~~~ 46 (496)
|++|||+++..+.. .++++.|++. | ++|..+...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 56689999865554 4789999886 7 888877554
No 332
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=28.54 E-value=59 Score=29.37 Aligned_cols=49 Identities=10% Similarity=-0.008 Sum_probs=39.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHH--------HHhC-CCeEEEEeCCcchhhHHHHH
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRL--------LAQN-GAAITIVTTPANAARFKTVV 56 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~--------L~~r-GH~Vt~~~~~~~~~~~~~~~ 56 (496)
++.||++.+.++..|-....-++.. |... |++|+.+....-.+.+.+..
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~aa 176 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKA 176 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHHH
Confidence 3578999999999999999999988 9999 99999988764444444443
No 333
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=28.51 E-value=42 Score=31.07 Aligned_cols=35 Identities=14% Similarity=0.152 Sum_probs=26.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+.+|||.|+-.+..|. .+|+.|.+.||+|+++...
T Consensus 28 ~~~~~I~iIG~G~mG~-----~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 28 PTDKKIGFLGLGLMGS-----GIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp CCSSCEEEECCSHHHH-----HHHHHHHHTTCCEEEECSS
T ss_pred CCCCeEEEEcccHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 3458999997665653 5788899999999877543
No 334
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=28.50 E-value=69 Score=28.95 Aligned_cols=39 Identities=15% Similarity=0.119 Sum_probs=32.0
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPF--LAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~--~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+++|+++++. ++-|-..-...||..|+++|.+|.++-.+
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4567766654 57899999999999999999999998655
No 335
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=28.46 E-value=61 Score=25.97 Aligned_cols=36 Identities=8% Similarity=0.140 Sum_probs=28.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
.-+++++..+. =+.|++++++.|.++|.+|+++ ...
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 34788877444 4899999999999999999998 543
No 336
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=28.44 E-value=1.6e+02 Score=26.32 Aligned_cols=33 Identities=12% Similarity=0.105 Sum_probs=23.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++.++ |-+- .++|+.|+++|++|+++.-.
T Consensus 33 k~~lVTGas-~GIG--~aia~~la~~G~~V~~~~r~ 65 (276)
T 3r1i_A 33 KRALITGAS-TGIG--KKVALAYAEAGAQVAVAARH 65 (276)
T ss_dssp CEEEEESTT-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 566666443 2222 57899999999999988654
No 337
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=28.41 E-value=2e+02 Score=26.62 Aligned_cols=111 Identities=14% Similarity=0.125 Sum_probs=61.9
Q ss_pred eEEEEeeCCccCCChhhHHHHHHHHHhC-CCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccc
Q 010988 282 SVVYVCLGSICNLTSSQMIELGLGLEAS-KKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHP 360 (496)
Q Consensus 282 ~vI~vs~GS~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~ 360 (496)
.+.+|..|.+.. .++.++.+. +.+++.+..... +.. +.+... -++. -+-...+++..+
T Consensus 6 rvgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~---~~~------~~~a~~---~g~~--~~~~~~~~l~~~ 64 (344)
T 3euw_A 6 RIALFGAGRIGH-------VHAANIAANPDLELVVIADPFI---EGA------QRLAEA---NGAE--AVASPDEVFARD 64 (344)
T ss_dssp EEEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSSH---HHH------HHHHHT---TTCE--EESSHHHHTTCS
T ss_pred EEEEECCcHHHH-------HHHHHHHhCCCcEEEEEECCCH---HHH------HHHHHH---cCCc--eeCCHHHHhcCC
Confidence 377888887653 345555554 555555544432 111 112111 1222 245567788866
Q ss_pred cccccccCCChh----hHHHHHHhCCcEec-cCCcc--ccchhHHHHHHHhhceEEeccc
Q 010988 361 SIGGFLTHCGWN----SSLEAISAGVPMIT-WPLFG--DQFCNEKLIVQVLNIGVRIGVE 413 (496)
Q Consensus 361 ~~~~~I~HGG~g----s~~eal~~GvP~v~-~P~~~--DQ~~na~r~~e~~G~g~~l~~~ 413 (496)
+++++|---... -+.+|+.+|+++++ -|+.. ++..-...++++.|+-+.+...
T Consensus 65 ~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~ 124 (344)
T 3euw_A 65 DIDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFN 124 (344)
T ss_dssp CCCEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCG
T ss_pred CCCEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecch
Confidence 666677555544 36788999999876 36543 3433333333677877777654
No 338
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=28.38 E-value=21 Score=33.30 Aligned_cols=28 Identities=21% Similarity=0.172 Sum_probs=23.4
Q ss_pred ccccccCCChhhHHHHHHh----CCcEeccCC
Q 010988 362 IGGFLTHCGWNSSLEAISA----GVPMITWPL 389 (496)
Q Consensus 362 ~~~~I~HGG~gs~~eal~~----GvP~v~~P~ 389 (496)
++++|.-||-||+.+++.. ++|++.++.
T Consensus 76 ~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 76 CELVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp CCCEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3449999999999999754 899999875
No 339
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=28.37 E-value=54 Score=30.83 Aligned_cols=73 Identities=22% Similarity=0.215 Sum_probs=46.4
Q ss_pred CChhhHHHHHHHHHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhh
Q 010988 294 LTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNS 373 (496)
Q Consensus 294 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs 373 (496)
.+.+....+.+|+...+.+.||.+.++. .. . .+.++++...+-.+|.. ||-..-...
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-g~---~-----------------rlL~~lD~~~i~~~PK~--~~GySDiTa 118 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGY-NS---N-----------------GLLKYLDYDLIRENPKF--FCGYSDITA 118 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS-CG---G-----------------GGGGGCCHHHHHTSCCE--EEECGGGHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc-cH---H-----------------HHHhhcChhHHHhCCeE--EEEecchHH
Confidence 3455677799999999999999988886 21 1 22344554445445554 666666666
Q ss_pred HHHHHH--hCCcEeccCC
Q 010988 374 SLEAIS--AGVPMITWPL 389 (496)
Q Consensus 374 ~~eal~--~GvP~v~~P~ 389 (496)
++-+++ .|++.+-=|.
T Consensus 119 L~~al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 119 LNNAIYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHHHHHCBCEEECCC
T ss_pred HHHHHHHhhCCcEEEccc
Confidence 666665 3665554443
No 340
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=28.29 E-value=52 Score=33.00 Aligned_cols=34 Identities=9% Similarity=0.054 Sum_probs=25.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+|||++.-. .|-+- ..|++.|.++||+|+.+.-.
T Consensus 147 ~m~VLVTGa--tG~IG--~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGS--RGLVG--RALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEEST--TSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECC--CCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 788877653 33333 46899999999999988765
No 341
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=28.27 E-value=93 Score=27.13 Aligned_cols=40 Identities=15% Similarity=0.125 Sum_probs=28.9
Q ss_pred CCCCEEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQG----HMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~G----Hi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.+|.+|.+++....+ +..-...|++.|+++|+.|+.-..+
T Consensus 7 ~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~ 50 (216)
T 1ydh_A 7 SRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGS 50 (216)
T ss_dssp CSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 455679888755433 3456788999999999998766554
No 342
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=28.22 E-value=38 Score=33.21 Aligned_cols=34 Identities=18% Similarity=0.134 Sum_probs=24.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.++|||.++-.+..| +.+|..|++ ||+|+.+-..
T Consensus 34 ~~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 34 SEFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECSC
T ss_pred cCCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEecC
Confidence 357899998766555 356777887 9999987543
No 343
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=28.17 E-value=2.1e+02 Score=25.41 Aligned_cols=34 Identities=26% Similarity=0.165 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|+++++..+.| + =..+|+.|+++|++|+++...
T Consensus 10 gk~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 10 DKVVLVTGGARG-Q--GRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCCh-H--HHHHHHHHHHCCCeEEEEccc
Confidence 467777755432 2 257899999999999988643
No 344
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=28.14 E-value=55 Score=29.19 Aligned_cols=35 Identities=14% Similarity=0.160 Sum_probs=29.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
.|.|..-++-|-..-...||..|+++|++|.++=.
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~ 37 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGC 37 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcC
Confidence 45555557799999999999999999999998843
No 345
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=28.11 E-value=1.5e+02 Score=26.09 Aligned_cols=32 Identities=16% Similarity=0.058 Sum_probs=22.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
|.++++.. .|-+- ..+++.|+++|++|+++..
T Consensus 22 k~vlItGa-sggiG--~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 22 KVALTTGA-GRGIG--RGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp CEEEETTT-TSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CchHH--HHHHHHHHHCCCEEEEEcC
Confidence 34555533 34332 5788999999999998765
No 346
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=28.07 E-value=50 Score=30.36 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=22.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
+|+++. +.|.+- ..|+++|.++||+|+.++-..
T Consensus 13 ~ilVtG--atG~iG--~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIFG--GTGYIG--NHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEET--TTSTTH--HHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEEC--CCchHH--HHHHHHHHHCCCcEEEEECCC
Confidence 555553 334443 467899999999999887654
No 347
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=28.06 E-value=86 Score=24.24 Aligned_cols=37 Identities=16% Similarity=0.231 Sum_probs=23.9
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
|+++++||+++- .+-.-...+.+.|.+.|++|..+..
T Consensus 1 M~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 37 (140)
T 3h5i_A 1 MSLKDKKILIVE----DSKFQAKTIANILNKYGYTVEIALT 37 (140)
T ss_dssp -----CEEEEEC----SCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCCCcEEEEEe----CCHHHHHHHHHHHHHcCCEEEEecC
Confidence 557788998886 4555667788888888999885443
No 348
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=28.00 E-value=52 Score=30.54 Aligned_cols=33 Identities=6% Similarity=0.214 Sum_probs=22.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
||+|++.- +.|-+- ..|+++|.++||+|+.+..
T Consensus 1 M~~vlVTG--atG~iG--~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 1 MAKLLITG--GCGFLG--SNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp -CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CcEEEEeC--CCchhH--HHHHHHHHhCCCEEEEEeC
Confidence 35666554 333332 4678999999999998864
No 349
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=27.79 E-value=19 Score=32.63 Aligned_cols=28 Identities=21% Similarity=0.297 Sum_probs=23.7
Q ss_pred ccccccCCChhhHHHHHHh---CCcEeccCC
Q 010988 362 IGGFLTHCGWNSSLEAISA---GVPMITWPL 389 (496)
Q Consensus 362 ~~~~I~HGG~gs~~eal~~---GvP~v~~P~ 389 (496)
++++|+=||=||+.+++.. ++|+++++.
T Consensus 42 ~D~vv~~GGDGTll~~a~~~~~~~PilGIn~ 72 (258)
T 1yt5_A 42 ADLIVVVGGDGTVLKAAKKAADGTPMVGFKA 72 (258)
T ss_dssp CSEEEEEECHHHHHHHHTTBCTTCEEEEEES
T ss_pred CCEEEEEeCcHHHHHHHHHhCCCCCEEEEEC
Confidence 4559999999999999877 788888874
No 350
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=27.71 E-value=1.7e+02 Score=25.82 Aligned_cols=59 Identities=19% Similarity=0.126 Sum_probs=33.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEe
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEI 71 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i 71 (496)
+.|.++++.++ |-+- ..+|++|+++|++|++....... ..+.........+..+.++..
T Consensus 25 ~~k~vlVTGas-~gIG--~~la~~l~~~G~~v~i~~~r~~~-~~~~~~~~l~~~~~~~~~~~~ 83 (267)
T 4iiu_A 25 MSRSVLVTGAS-KGIG--RAIARQLAADGFNIGVHYHRDAA-GAQETLNAIVANGGNGRLLSF 83 (267)
T ss_dssp CCCEEEETTTT-SHHH--HHHHHHHHHTTCEEEEEESSCHH-HHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCEEEEECCC-ChHH--HHHHHHHHHCCCEEEEEeCCchH-HHHHHHHHHHhcCCceEEEEe
Confidence 44677777554 3232 58899999999999877654322 222322222223445555443
No 351
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=27.71 E-value=1e+02 Score=26.91 Aligned_cols=40 Identities=18% Similarity=0.182 Sum_probs=28.5
Q ss_pred CCCCEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGH----MIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GH----i~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.+|.+|.+++....+- ..-...|++.|+++|+.|+.-..+
T Consensus 11 ~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~ 54 (215)
T 2a33_A 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGS 54 (215)
T ss_dssp CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCCh
Confidence 3455798886655432 345778899999999999876654
No 352
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=27.67 E-value=55 Score=30.33 Aligned_cols=36 Identities=17% Similarity=0.211 Sum_probs=23.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.+||+|++.-. .|-+- ..|+++|.++||+|+.+.-.
T Consensus 19 ~~~~~vlVTGa--tG~iG--~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 19 SHMKKVFITGI--CGQIG--SHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp --CCEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCCCEEEEeCC--ccHHH--HHHHHHHHHCCCEEEEEECC
Confidence 35677766643 33332 46789999999999988654
No 353
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=27.64 E-value=47 Score=28.39 Aligned_cols=36 Identities=8% Similarity=0.012 Sum_probs=22.0
Q ss_pred CCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 9 QPHFVLFPF-LAQGHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 9 ~~~il~~~~-~~~GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
||||+++.. |-.+.-.-...+++.+.+.|++|++.-
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~d 37 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHE 37 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEE
Confidence 568876664 443322345556777777788888764
No 354
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=27.61 E-value=1.5e+02 Score=26.24 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=23.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++.++ |-+- ..+|++|+++|++|.++.-.
T Consensus 30 k~vlITGas-~gIG--~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 30 QVAVVTGAS-RGIG--AAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp CEEEESSTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-ChHH--HHHHHHHHHCCCEEEEEECC
Confidence 667777544 3232 57799999999999887654
No 355
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=27.58 E-value=74 Score=26.29 Aligned_cols=44 Identities=9% Similarity=-0.014 Sum_probs=34.6
Q ss_pred EEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHH
Q 010988 11 HFVLFP-FLAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKT 54 (496)
Q Consensus 11 ~il~~~-~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~ 54 (496)
|+.|+. .+..--.++.+-||..-+.-|++|+++.+......+++
T Consensus 6 kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 6 KMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBC
T ss_pred cEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhcc
Confidence 554444 46688899999999999999999999998766665544
No 356
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=27.50 E-value=1.2e+02 Score=27.60 Aligned_cols=34 Identities=18% Similarity=0.057 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|+++++.++. -+ =.++|++|+++|++|++....
T Consensus 49 ~k~vlVTGas~-GI--G~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 49 DRKALVTGGDS-GI--GRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp TCEEEEETTTS-HH--HHHHHHHHHHTTCEEEEECCG
T ss_pred CCEEEEeCCCc-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 36777775542 22 257899999999999887654
No 357
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=27.50 E-value=2.2e+02 Score=25.35 Aligned_cols=34 Identities=29% Similarity=0.185 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|+++++..+.| + =.++|+.|+++|++|+++...
T Consensus 10 ~k~~lVTGas~g-I--G~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 10 GKTALITGGARG-M--GRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEeCC
Confidence 367777755532 2 257899999999999988653
No 358
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=27.49 E-value=85 Score=27.53 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=22.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|.++++.. .|-+ =..++++|+++|++|+++.-.
T Consensus 12 k~vlITGa-sggi--G~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 12 ACAAVTGA-GSGI--GLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp CEEEEETT-TSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 45555533 3333 257899999999999988654
No 359
>2iml_A Hypothetical protein; FMN binding, PSI-2, structural genomics, protein structure initiative; HET: FMN; 1.65A {Archaeoglobus fulgidus} SCOP: b.45.1.4
Probab=27.37 E-value=1.5e+02 Score=25.46 Aligned_cols=43 Identities=14% Similarity=0.258 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHhcCCCCCCcc
Q 010988 447 RENRRKRAREFQMMAKRATEETGSSSLMIKLLIQDIMHQPHSDHQH 492 (496)
Q Consensus 447 ~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 492 (496)
++.+.+..+.+....++. ||.....+-+.|.+.+..-|..|.|
T Consensus 157 ~~~~~~~i~~~~~~v~K~---gg~~e~ea~~~l~~~~~~~~~~~~~ 199 (199)
T 2iml_A 157 RKELLERIHYYREIVQKC---GSEREKRAFEIIMEKIGEGHHHHHH 199 (199)
T ss_dssp HHHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHTTCC------
T ss_pred HHHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHhccccccCC
Confidence 446888999999999865 9999998888888888888877765
No 360
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=27.17 E-value=49 Score=32.76 Aligned_cols=32 Identities=13% Similarity=0.014 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTT 45 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~ 45 (496)
||||.|+-.+..| ..+|..|+++ ||+|+++-.
T Consensus 5 ~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~ 38 (467)
T 2q3e_A 5 IKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDV 38 (467)
T ss_dssp CCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred ccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 6899999766666 4678888888 899998754
No 361
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=27.08 E-value=59 Score=28.19 Aligned_cols=37 Identities=24% Similarity=0.235 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+.-|+++. +..|+..-...+++.|.++|++|..+-.+
T Consensus 12 ~~~vvllH-G~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 48 (267)
T 3sty_A 12 KKHFVLVH-AAFHGAWCWYKIVALMRSSGHNVTALDLG 48 (267)
T ss_dssp CCEEEEEC-CTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CCeEEEEC-CCCCCcchHHHHHHHHHhcCCeEEEeccc
Confidence 34455555 44556666678999999999998876544
No 362
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=27.03 E-value=2.6e+02 Score=22.89 Aligned_cols=32 Identities=6% Similarity=0.086 Sum_probs=23.1
Q ss_pred HHHHHHHHHhCCCeEEEEeCCcchhhHHHHHH
Q 010988 26 MIDIGRLLAQNGAAITIVTTPANAARFKTVVA 57 (496)
Q Consensus 26 ~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~ 57 (496)
...+.+.|.++|+.|.+++.......+.....
T Consensus 73 ~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~ 104 (187)
T 2wm8_A 73 VPEVLKRLQSLGVPGAAASRTSEIEGANQLLE 104 (187)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSCHHHHHHHHH
T ss_pred HHHHHHHHHHCCceEEEEeCCCChHHHHHHHH
Confidence 67788899999999999998753333444433
No 363
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=26.90 E-value=88 Score=28.51 Aligned_cols=35 Identities=11% Similarity=0.125 Sum_probs=24.1
Q ss_pred CEEEEEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQ-GHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~-GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|+++++..+. +-+ =..+|++|+++|++|+++...
T Consensus 30 ~k~vlVTGasg~~GI--G~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 30 GKKGVIIGVANDKSL--AWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp TCEEEEECCCSTTSH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeCCCCCCH--HHHHHHHHHHCCCEEEEEeCC
Confidence 35666665442 123 257899999999999987655
No 364
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=26.83 E-value=1e+02 Score=23.74 Aligned_cols=37 Identities=19% Similarity=0.289 Sum_probs=23.1
Q ss_pred HHHHhcCCCCeEEEEcCCCc--chHHHHHhc-------CCCeEEEecc
Q 010988 112 NLLKELAPKPSCIVSDMCYP--WTVDTAARF-------NIPRISFHGF 150 (496)
Q Consensus 112 ~ll~~~~~~pDlVI~D~~~~--~a~~~A~~l-------giP~v~~~~~ 150 (496)
+.++. .+||+||.|...+ .+..+++.+ .+|.+.++..
T Consensus 41 ~~l~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 41 EALNA--TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHHhc--cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 34445 5899999997554 344444332 5788876544
No 365
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=26.67 E-value=41 Score=29.15 Aligned_cols=34 Identities=9% Similarity=0.103 Sum_probs=23.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++|||+|+..+..| ..+++.|.+.||+|+++...
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 45789888644344 35788899999999887543
No 366
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=26.63 E-value=3e+02 Score=23.39 Aligned_cols=41 Identities=12% Similarity=0.121 Sum_probs=32.7
Q ss_pred CCC-CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 4 EGS-SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 4 ~~~-~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
.|+ ..++|+.++|. +-.|....--..|.++|++|.=+.+..
T Consensus 3 ~m~~~~~l~~avVCa---SN~NRSMEaH~~L~k~G~~V~SfGTGs 44 (198)
T 3p9y_A 3 HMTDPSKLAVAVVDS---SNMNRSMEAHNFLAKKGFNVRSYGTGE 44 (198)
T ss_dssp SCCCTTCCEEEEEES---SSSSHHHHHHHHHHHTTCEEEEEECSS
T ss_pred cCCCCCCceEEEEcC---CCCcccHHHHHHHHhCCCceeecCCCc
Confidence 455 67889998884 566777788888999999999888774
No 367
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=26.58 E-value=36 Score=34.15 Aligned_cols=36 Identities=8% Similarity=0.175 Sum_probs=28.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPAN 48 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~ 48 (496)
++.||+|+-.+.-| +.+|+.|.++|++||++...++
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCCC
Confidence 46799998865444 4678999999999999977543
No 368
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=26.47 E-value=32 Score=32.32 Aligned_cols=36 Identities=14% Similarity=-0.033 Sum_probs=25.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+++|+|++.. +.|.+- ..|+++|.++||+|+.+.-.
T Consensus 7 ~~~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 7 WQGKRVFVTG--HTGFKG--GWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp HTTCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred hCCCEEEEEC--CCchHH--HHHHHHHHhCCCeEEEEeCC
Confidence 4456776654 444443 45789999999999988754
No 369
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=26.23 E-value=37 Score=31.39 Aligned_cols=36 Identities=11% Similarity=0.181 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
+++.+|+++-.+..| +..|..|+++|++|+++-...
T Consensus 3 ~~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 38 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTG-----LFAGFYVGMRGLSFRFVDPLP 38 (335)
T ss_dssp CCEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEeCCC
Confidence 445678887655443 457778888999999997653
No 370
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=26.17 E-value=63 Score=29.43 Aligned_cols=32 Identities=9% Similarity=0.154 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|||.|+-.+..|. .+|+.|.+.||+|+++...
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 6999998766664 4688899999999776443
No 371
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=26.04 E-value=50 Score=29.29 Aligned_cols=35 Identities=23% Similarity=0.153 Sum_probs=26.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
...+||.|+-.+..| ..+|+.|+++||+|++....
T Consensus 17 ~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred cCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 356899999655554 45789999999999987654
No 372
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=26.00 E-value=87 Score=24.66 Aligned_cols=34 Identities=3% Similarity=0.035 Sum_probs=23.0
Q ss_pred CCCEEEEEcCCCccCHH--------HHHHHHHHHHhCCCeEE
Q 010988 8 QQPHFVLFPFLAQGHMI--------PMIDIGRLLAQNGAAIT 41 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~--------p~l~LA~~L~~rGH~Vt 41 (496)
-+||.++++.|-.|... .+-..|..|.++||-+.
T Consensus 6 ~~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 6 GHMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp -CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 35677888888766632 34456777889999655
No 373
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=25.99 E-value=96 Score=26.55 Aligned_cols=38 Identities=16% Similarity=0.191 Sum_probs=27.8
Q ss_pred CCCCEEEEEcCCC---c----cCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 7 SQQPHFVLFPFLA---Q----GHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 7 ~~~~~il~~~~~~---~----GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
++|.+|.+++.-. . -...-...|++.|+++|+.|+.-.
T Consensus 21 ~~m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVsGg 65 (195)
T 1rcu_A 21 GHMKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFNGG 65 (195)
T ss_dssp --CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 4566898888532 2 456778999999999999988743
No 374
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=25.93 E-value=3.2e+02 Score=24.02 Aligned_cols=39 Identities=8% Similarity=-0.226 Sum_probs=22.7
Q ss_pred hhhHHHHHHHHhcCCCCeEEEEcCCCcchHH-HHHhcCCCeEE
Q 010988 105 LLQLPLENLLKELAPKPSCIVSDMCYPWTVD-TAARFNIPRIS 146 (496)
Q Consensus 105 ~~~~~l~~ll~~~~~~pDlVI~D~~~~~a~~-~A~~lgiP~v~ 146 (496)
.+.+.+.++.+. ++|+||.-=++..+.. +.+.+++|++-
T Consensus 57 ~l~~~~~~l~~~---g~d~iviaCnt~~~l~~lr~~~~iPvig 96 (245)
T 3qvl_A 57 GVLEQIRAGREQ---GVDGHVIASFGDPGLLAARELAQGPVIG 96 (245)
T ss_dssp HHHHHHHHHHHH---TCSEEEEC-CCCTTHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHC---CCCEEEEeCCChhHHHHHHHHcCCCEEC
Confidence 344444444444 8999986633433334 44558999885
No 375
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=25.92 E-value=75 Score=27.10 Aligned_cols=39 Identities=10% Similarity=-0.009 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLA---QGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~---~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.+++|.+++... .-+..-...|++.|+++|+.|..-..+
T Consensus 12 ~~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 12 GRWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp -CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CCeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 458999888654 222345788889999999988776544
No 376
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=25.91 E-value=58 Score=30.64 Aligned_cols=37 Identities=19% Similarity=0.286 Sum_probs=24.8
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCc-chHHHHHhcCCCeEEEe
Q 010988 109 PLENLLKELAPKPSCIVSDMCYP-WTVDTAARFNIPRISFH 148 (496)
Q Consensus 109 ~l~~ll~~~~~~pDlVI~D~~~~-~a~~~A~~lgiP~v~~~ 148 (496)
.++++++- +||+||...... ......+.+|||++.+.
T Consensus 88 n~E~Ilal---~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 88 DLESLITL---QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp CHHHHHHH---CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CHHHHhcC---CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 45667665 899999875422 12234567899999853
No 377
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=25.88 E-value=69 Score=26.58 Aligned_cols=37 Identities=11% Similarity=0.327 Sum_probs=28.9
Q ss_pred CEEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLA---QGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~---~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
-+|+|+|.-+ .---.+...|++.|.++|.+|.|..+|
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 4778877422 123457899999999999999999998
No 378
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=25.84 E-value=64 Score=24.64 Aligned_cols=38 Identities=5% Similarity=-0.109 Sum_probs=24.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
.++|||+++|..+.|--.-...+-++..++|.+|.+..
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 46889999998875444444444455556688777754
No 379
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=25.79 E-value=1.7e+02 Score=26.06 Aligned_cols=40 Identities=15% Similarity=0.362 Sum_probs=30.7
Q ss_pred CCeEEEEeeCCccCCChhhHHHHHHHHHh--CCCCeEEEEeC
Q 010988 280 PNSVVYVCLGSICNLTSSQMIELGLGLEA--SKKPFIWVIRG 319 (496)
Q Consensus 280 ~~~vI~vs~GS~~~~~~~~~~~~~~a~~~--~~~~~i~~~~~ 319 (496)
.+.+|+|++||......+.+..+.+.+++ .+..+-|....
T Consensus 9 ~~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 9 KTGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp CEEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred CceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 35699999999877666678888888876 46788888654
No 380
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=25.77 E-value=42 Score=31.06 Aligned_cols=32 Identities=16% Similarity=-0.031 Sum_probs=26.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|||+|+-.++.|- .+|..|+ +||+|+++....
T Consensus 3 mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCH
Confidence 6999998777774 5688888 999999998764
No 381
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=25.51 E-value=96 Score=28.51 Aligned_cols=28 Identities=11% Similarity=0.005 Sum_probs=23.4
Q ss_pred cccccCCChhhHHHHHH------hCCcEeccCCc
Q 010988 363 GGFLTHCGWNSSLEAIS------AGVPMITWPLF 390 (496)
Q Consensus 363 ~~~I~HGG~gs~~eal~------~GvP~v~~P~~ 390 (496)
+++|.-||-||+.|++. .++|+.++|..
T Consensus 65 d~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 65 DLIIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp SEEEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred CEEEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 34999999999999864 56899999974
No 382
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=25.47 E-value=91 Score=28.25 Aligned_cols=38 Identities=8% Similarity=-0.065 Sum_probs=27.5
Q ss_pred CCEEEEEcCCC-ccCHH---HHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLA-QGHMI---PMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~-~GHi~---p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++||+++..+. .-|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 36898887543 22322 4468999999999999988765
No 383
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=25.43 E-value=70 Score=26.61 Aligned_cols=37 Identities=16% Similarity=0.382 Sum_probs=29.0
Q ss_pred CEEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLA---QGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~---~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
-+|+|+|.-+ .---.+...|++.|.++|.+|.|..+|
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 4788887422 223458899999999999999999998
No 384
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=25.40 E-value=95 Score=26.37 Aligned_cols=72 Identities=11% Similarity=0.135 Sum_probs=42.3
Q ss_pred ccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcCChh---HHHHHHHHHHHHHHHHH-----
Q 010988 392 DQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNEGGE---RENRRKRAREFQMMAKR----- 463 (496)
Q Consensus 392 DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~~~~---~~~~~~~a~~l~~~~~~----- 463 (496)
+..+.+..- +..|+|+. +|+++|.++|.++++.... .++|+ +.-.+-...++
T Consensus 100 ~~id~~~Fe-~~cGVGV~------------------VT~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~Lk 159 (187)
T 3tl4_X 100 EASTKMGMN-ENSGVGIE------------------ITEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELK 159 (187)
T ss_dssp GGCCHHHHH-HTTTTTCC------------------CCHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGT
T ss_pred CCCCHHHHH-HHCCCCeE------------------eCHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCC
Confidence 344445555 68888854 5788999999999963221 22344 44444444432
Q ss_pred HhhhCCChHHHHHHHHHHHhc
Q 010988 464 ATEETGSSSLMIKLLIQDIMH 484 (496)
Q Consensus 464 a~~~~g~~~~~~~~~~~~~~~ 484 (496)
+ +.+-.....++.-+-++++
T Consensus 160 W-Ad~~~vK~~vD~~~l~lLG 179 (187)
T 3tl4_X 160 W-ADPRSFKPIIDQEVLKLLG 179 (187)
T ss_dssp T-SCTTSHHHHHHHHHHHHHC
T ss_pred C-CCHHHHHHHHHHHHHHHcC
Confidence 2 3456666666666666554
No 385
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=25.36 E-value=34 Score=31.97 Aligned_cols=34 Identities=12% Similarity=0.142 Sum_probs=19.8
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 010988 6 SSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIV 43 (496)
Q Consensus 6 ~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~ 43 (496)
++++|||++.. +.|.+- ..|+++|.++|+++.++
T Consensus 21 ~~~~~~vlVtG--atG~iG--~~l~~~L~~~g~~~~v~ 54 (346)
T 4egb_A 21 QSNAMNILVTG--GAGFIG--SNFVHYMLQSYETYKII 54 (346)
T ss_dssp ---CEEEEEET--TTSHHH--HHHHHHHHHHCTTEEEE
T ss_pred ccCCCeEEEEC--CccHHH--HHHHHHHHhhCCCcEEE
Confidence 35667776654 344443 37889999999444443
No 386
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=25.36 E-value=1.1e+02 Score=22.91 Aligned_cols=39 Identities=23% Similarity=0.393 Sum_probs=24.5
Q ss_pred HHHHhcCCCCeEEEEcCCCc--chHHHHHh-----cCCCeEEEecchH
Q 010988 112 NLLKELAPKPSCIVSDMCYP--WTVDTAAR-----FNIPRISFHGFSC 152 (496)
Q Consensus 112 ~ll~~~~~~pDlVI~D~~~~--~a~~~A~~-----lgiP~v~~~~~~~ 152 (496)
+.++. .+||+||.|...+ .+..+++. .++|.+.++....
T Consensus 41 ~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (126)
T 1dbw_A 41 AFAPD--VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGD 86 (126)
T ss_dssp HHGGG--CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTC
T ss_pred HHHhc--CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 34455 6899999996554 34444433 3678888765543
No 387
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=25.24 E-value=47 Score=30.89 Aligned_cols=33 Identities=12% Similarity=0.075 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNG-AAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rG-H~Vt~~~~~ 46 (496)
+|||.|+-.+..| ..+|+.|+++| |+|+++...
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 4689999876666 67899999999 999977543
No 388
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=25.19 E-value=71 Score=27.96 Aligned_cols=35 Identities=9% Similarity=-0.098 Sum_probs=24.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+.|.++++..+ |-+- ..+++.|+++|++|+++.-.
T Consensus 6 ~~k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 6 EARRVLVYGGR-GALG--SRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCCEEEEETTT-SHHH--HHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEECCC-cHHH--HHHHHHHHhCCCEEEEEeCC
Confidence 34566666443 3232 57899999999999987654
No 389
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=25.15 E-value=51 Score=31.24 Aligned_cols=36 Identities=11% Similarity=0.145 Sum_probs=25.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNG-AAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rG-H~Vt~~~~~ 46 (496)
+++|+|++.-. .|-+- ..|+++|.++| |+|+.+.-.
T Consensus 30 ~~~~~ilVtGa--tG~iG--~~l~~~L~~~g~~~V~~~~r~ 66 (377)
T 2q1s_A 30 LANTNVMVVGG--AGFVG--SNLVKRLLELGVNQVHVVDNL 66 (377)
T ss_dssp GTTCEEEEETT--TSHHH--HHHHHHHHHTTCSEEEEECCC
T ss_pred hCCCEEEEECC--ccHHH--HHHHHHHHHcCCceEEEEECC
Confidence 35677776643 34332 56889999999 999988654
No 390
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=25.02 E-value=76 Score=29.05 Aligned_cols=38 Identities=5% Similarity=0.059 Sum_probs=30.3
Q ss_pred CCEE-EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHF-VLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~i-l~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++|+ .|..-++-|=..-...||..|+++|++|.++=..
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4454 5554467999999999999999999999998544
No 391
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=24.98 E-value=53 Score=28.13 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=23.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|||+++- +.|.+- ..+++.|.++||+|+++...
T Consensus 1 m~i~iiG--a~G~~G--~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLG--GTGNLG--KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4788774 233333 46789999999999987654
No 392
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=24.96 E-value=1.1e+02 Score=21.24 Aligned_cols=56 Identities=11% Similarity=0.148 Sum_probs=30.7
Q ss_pred ccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHh-h-hCCChHHHHHHHHHHHhcC
Q 010988 427 LVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRAT-E-ETGSSSLMIKLLIQDIMHQ 485 (496)
Q Consensus 427 ~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~-~-~~g~~~~~~~~~~~~~~~~ 485 (496)
..+.++|.++|+.+|.+.+- .. --.++++..+.+.. . .=.+-...|.+.|..++.-
T Consensus 11 ~Psd~ei~~~I~~IL~~aDL-~t--vT~K~VR~~Le~~~pg~dLs~kK~~I~~~I~~~L~~ 68 (70)
T 1q1v_A 11 PPTDEELKETIKKLLASANL-EE--VTMKQICKKVYENYPTYDLTERKDFIKTTVKELISL 68 (70)
T ss_dssp CCCHHHHHHHHHHHHTTSCG-GG--CCHHHHHHHHHHHCSSSCCSHHHHHHHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHHHHhCCH-HH--HhHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHhc
Confidence 58999999999999975421 11 11233444443332 1 1123345666666665543
No 393
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=24.90 E-value=97 Score=28.07 Aligned_cols=20 Identities=25% Similarity=0.301 Sum_probs=17.0
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 010988 27 IDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 27 l~LA~~L~~rGH~Vt~~~~~ 46 (496)
..+++.|+++|++|+++.-.
T Consensus 40 ~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 40 KGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999988654
No 394
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=24.90 E-value=63 Score=30.55 Aligned_cols=36 Identities=11% Similarity=0.071 Sum_probs=22.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+|+|.++++ ++.|-+- ..|++.|.++||+|+.+.-.
T Consensus 26 ~M~k~vlVt-GatG~IG--~~l~~~L~~~g~~V~~~~r~ 61 (381)
T 1n7h_A 26 EPRKIALIT-GITGQDG--SYLTEFLLGKGYEVHGLIRR 61 (381)
T ss_dssp --CCEEEEE-TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred hhCCeEEEE-cCCchHH--HHHHHHHHHCCCEEEEEecC
Confidence 343444444 3334443 56789999999999988754
No 395
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=24.90 E-value=2.5e+02 Score=24.97 Aligned_cols=33 Identities=27% Similarity=0.177 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
.|+++++..+.| + =.++|+.|+++|++|+++..
T Consensus 11 ~k~~lVTGas~g-I--G~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 11 GKVAFVTGAARG-Q--GRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp TCEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEec
Confidence 467777755532 2 25789999999999998754
No 396
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=24.74 E-value=50 Score=31.62 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=26.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+.++|+++-.+.. =+..|..|+++||+|+++-..
T Consensus 2 ~~~~v~iiG~G~~-----Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 2 KSKKILIVGAGFS-----GAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp CCCEEEEECCSHH-----HHHHHHHHHTTTCEEEEEESS
T ss_pred CcCCEEEECcCHH-----HHHHHHHHHHCCCcEEEEEec
Confidence 3578988875533 356788999999999999754
No 397
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=24.71 E-value=87 Score=27.75 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=22.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++..+ |-+- ..+++.|+++|++|+++.-.
T Consensus 8 k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 8 KLAVVTAGS-SGLG--FASALELARNGARLLLFSRN 40 (260)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-chHH--HHHHHHHHHCCCEEEEEeCC
Confidence 555565433 3222 57899999999999987654
No 398
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=24.69 E-value=93 Score=23.88 Aligned_cols=65 Identities=12% Similarity=0.057 Sum_probs=44.7
Q ss_pred hccccccccccCCChhh---------HHHHHHhCCcEeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccc
Q 010988 357 LSHPSIGGFLTHCGWNS---------SLEAISAGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVL 427 (496)
Q Consensus 357 l~~~~~~~~I~HGG~gs---------~~eal~~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~ 427 (496)
+..+++ +|--.|..| +..|...|+|+|++=.++.+. .-..+ ++.+..+. .
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l-~~~a~~iV-----------------~ 94 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPEL-EAVSSEVV-----------------G 94 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTH-HHHCSEEE-----------------C
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHH-HhhCceec-----------------c
Confidence 345666 888888776 667888999999888777652 22225 34333322 4
Q ss_pred cCHHHHHHHHHHHhc
Q 010988 428 VKKEDVVKAINMLMN 442 (496)
Q Consensus 428 ~~~~~l~~~i~~lL~ 442 (496)
.+.+.|.++|+..++
T Consensus 95 Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 95 WNPHCIRDALEDALD 109 (111)
T ss_dssp SCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhccC
Confidence 889999999998764
No 399
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=24.66 E-value=4e+02 Score=24.25 Aligned_cols=106 Identities=10% Similarity=0.140 Sum_probs=58.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGS 84 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~ 84 (496)
.+++||+++.++. || .+.+|..+-.+. ..+|..+.+.... +..... ..++.++.+|.. .
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~--~~~~A~-----~~gIp~~~~~~~---------~ 153 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPD--FAPLAA-----QHGLPFRHFPIT---------A 153 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSST--THHHHH-----HTTCCEEECCCC---------S
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHH--HHHHHH-----HcCCCEEEeCCC---------c
Confidence 4578998888665 54 456666655443 4687777653211 112111 136887776511 0
Q ss_pred CcccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCeEEEec
Q 010988 85 ENFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCY-PWTVDTAARFNIPRISFHG 149 (496)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~-~~a~~~A~~lgiP~v~~~~ 149 (496)
. . . ......+.++++. .+||+||.-.+. .-...+.+.+.-.++.+++
T Consensus 154 ~------~-r---------~~~~~~~~~~l~~--~~~Dlivla~y~~il~~~~l~~~~~~~iNiHp 201 (292)
T 3lou_A 154 D------T-K---------AQQEAQWLDVFET--SGAELVILARYMQVLSPEASARLANRAINIHH 201 (292)
T ss_dssp S------C-H---------HHHHHHHHHHHHH--HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred C------C-H---------HHHHHHHHHHHHH--hCCCEEEecCchhhCCHHHHhhhcCCeEEeCC
Confidence 0 0 0 0123456667777 699999876443 3455566666666666543
No 400
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=24.60 E-value=50 Score=33.25 Aligned_cols=36 Identities=17% Similarity=0.141 Sum_probs=27.6
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHh---CCCeEEEEeC
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQ---NGAAITIVTT 45 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~---rGH~Vt~~~~ 45 (496)
|++++.+|+|+-.+..| +.+|-.|++ +|++|+++-.
T Consensus 1 M~~~~~dVvIVGgG~aG-----l~aA~~La~~~~~G~~V~liE~ 39 (538)
T 2aqj_A 1 MNKPIKNIVIVGGGTAG-----WMAASYLVRALQQQANITLIES 39 (538)
T ss_dssp -CCBCCEEEEECCSHHH-----HHHHHHHHHHCCSSCEEEEEEC
T ss_pred CCCCCCeEEEECCCHHH-----HHHHHHHHhhcCCCCEEEEECC
Confidence 33567789998876565 667788888 9999999964
No 401
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=24.53 E-value=53 Score=30.17 Aligned_cols=35 Identities=11% Similarity=0.089 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|++|+++. +.|.+- ..|+++|.++||+|+.++-..
T Consensus 4 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYG--GTGYIG--KFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEET--TTSTTH--HHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEEc--CCchhH--HHHHHHHHhCCCcEEEEECCc
Confidence 55666654 344443 367899999999999987654
No 402
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=24.51 E-value=28 Score=31.14 Aligned_cols=34 Identities=6% Similarity=0.053 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC----CeEEEEeC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNG----AAITIVTT 45 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rG----H~Vt~~~~ 45 (496)
|++|||.|+-.+..|. .+|+.|.++| |+|+++..
T Consensus 2 m~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGS-----ALAHGIANANIIKKENLFYYGP 39 (262)
T ss_dssp CSSSCEEEECCSHHHH-----HHHHHHHHHTSSCGGGEEEECS
T ss_pred CCCCEEEEECcCHHHH-----HHHHHHHHCCCCCCCeEEEEeC
Confidence 4568999997766554 4678888889 89987644
No 403
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=24.50 E-value=57 Score=30.29 Aligned_cols=34 Identities=9% Similarity=0.153 Sum_probs=23.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~ 46 (496)
|++|++.. +.|.+- ..|+++|.++ ||+|+.+.-.
T Consensus 4 m~~vlVTG--atG~iG--~~l~~~L~~~~~g~~V~~~~r~ 39 (348)
T 1oc2_A 4 FKNIIVTG--GAGFIG--SNFVHYVYNNHPDVHVTVLDKL 39 (348)
T ss_dssp CSEEEEET--TTSHHH--HHHHHHHHHHCTTCEEEEEECC
T ss_pred CcEEEEeC--CccHHH--HHHHHHHHHhCCCCEEEEEeCC
Confidence 56766654 334332 4578889888 8999988653
No 404
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=24.49 E-value=41 Score=31.29 Aligned_cols=31 Identities=23% Similarity=0.180 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
|||.|+-.+..| ..+|..|+++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 488888766555 4568899999999998876
No 405
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=24.48 E-value=65 Score=27.96 Aligned_cols=33 Identities=18% Similarity=0.138 Sum_probs=23.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|.++++.+ .|-+- ..+++.|+++||+|+++...
T Consensus 6 k~vlVtGa-sggiG--~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 6 GAVLITGA-SRGIG--EATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp CEEEESST-TSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CcHHH--HHHHHHHHHCCCEEEEEECC
Confidence 55566643 34332 57899999999999987654
No 406
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=24.47 E-value=50 Score=29.79 Aligned_cols=34 Identities=9% Similarity=-0.025 Sum_probs=23.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+|+++++.++ |-+- ..+|++|+++|++|+.+...
T Consensus 5 ~k~vlVTGas-~gIG--~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 5 AKVWLVTGAS-SGFG--RAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CCEEEETTTT-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEECCC-ChHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3666666443 3332 37899999999999887654
No 407
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=24.47 E-value=1.9e+02 Score=26.95 Aligned_cols=128 Identities=16% Similarity=0.089 Sum_probs=0.0
Q ss_pred eEEEEeeCCccCCChhhHHHHHHHHHhC--CCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhcc
Q 010988 282 SVVYVCLGSICNLTSSQMIELGLGLEAS--KKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSH 359 (496)
Q Consensus 282 ~vI~vs~GS~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~ 359 (496)
.+.+|..|.+.. ..+.++.+. +.+++.+..... +........-++ ..+-...+++..
T Consensus 15 rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~~------------~~~~~~~~~~~~--~~~~~~~~ll~~ 73 (354)
T 3q2i_A 15 RFALVGCGRIAN-------NHFGALEKHADRAELIDVCDIDP------------AALKAAVERTGA--RGHASLTDMLAQ 73 (354)
T ss_dssp EEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSSH------------HHHHHHHHHHCC--EEESCHHHHHHH
T ss_pred eEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCCH------------HHHHHHHHHcCC--ceeCCHHHHhcC
Q ss_pred ccccccccCCChhh----HHHHHHhCCcEec---cCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHH
Q 010988 360 PSIGGFLTHCGWNS----SLEAISAGVPMIT---WPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKED 432 (496)
Q Consensus 360 ~~~~~~I~HGG~gs----~~eal~~GvP~v~---~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
+++++++----... +.+++.+|+++++ +-...++-.-...++++.|+-+.+... ..-..
T Consensus 74 ~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~--------------~r~~p 139 (354)
T 3q2i_A 74 TDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQ--------------NRRNA 139 (354)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCG--------------GGGSH
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEc--------------ccCCH
Q ss_pred HHHHHHHHhcCC
Q 010988 433 VVKAINMLMNEG 444 (496)
Q Consensus 433 l~~~i~~lL~~~ 444 (496)
..+.+++++.+.
T Consensus 140 ~~~~~k~~i~~g 151 (354)
T 3q2i_A 140 TLQLLKRAMQEK 151 (354)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhcC
No 408
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=24.44 E-value=60 Score=30.83 Aligned_cols=40 Identities=13% Similarity=0.071 Sum_probs=22.6
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 1 MASEGSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 1 m~~~~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|++-|..++|||+++- + |.+-. .+|+.|++ .|+|+++...
T Consensus 8 ~~~~~~g~~mkilvlG--a-G~vG~--~~~~~L~~-~~~v~~~~~~ 47 (365)
T 3abi_A 8 HHHHIEGRHMKVLILG--A-GNIGR--AIAWDLKD-EFDVYIGDVN 47 (365)
T ss_dssp --------CCEEEEEC--C-SHHHH--HHHHHHTT-TSEEEEEESC
T ss_pred ccccccCCccEEEEEC--C-CHHHH--HHHHHHhc-CCCeEEEEcC
Confidence 3445556789999984 4 66643 46778854 6999977543
No 409
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=24.43 E-value=80 Score=29.07 Aligned_cols=36 Identities=11% Similarity=0.150 Sum_probs=24.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++.++|++.- +.|.+- ..|++.|.++||+|+.+.-.
T Consensus 9 ~~~~~vlVTG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTG--ANGFVA--SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEEC--CccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3456766653 334443 46789999999999988754
No 410
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=24.42 E-value=2.2e+02 Score=25.21 Aligned_cols=33 Identities=18% Similarity=-0.009 Sum_probs=22.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++..+ |-+ =.++|+.|+++|++|+++.-.
T Consensus 22 k~vlVTGas-~gI--G~aia~~l~~~G~~V~~~~r~ 54 (273)
T 1ae1_A 22 TTALVTGGS-KGI--GYAIVEELAGLGARVYTCSRN 54 (273)
T ss_dssp CEEEEESCS-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCc-chH--HHHHHHHHHHCCCEEEEEeCC
Confidence 556666443 322 247899999999999987654
No 411
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=24.39 E-value=39 Score=28.02 Aligned_cols=34 Identities=18% Similarity=-0.050 Sum_probs=21.0
Q ss_pred CCCEEEEEcCCCccCH-HH-HHHHHHHHHhCCCeEEEEeC
Q 010988 8 QQPHFVLFPFLAQGHM-IP-MIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi-~p-~l~LA~~L~~rGH~Vt~~~~ 45 (496)
+||||.+-+= |- .. =-.|.+.|.++||+|+=+.+
T Consensus 2 ~~MkIaigsD----haG~~lK~~i~~~L~~~G~eV~D~G~ 37 (162)
T 2vvp_A 2 SGMRVYLGAD----HAGYELKQRIIEHLKQTGHEPIDCGA 37 (162)
T ss_dssp -CCEEEEEEC----HHHHHHHHHHHHHHHHTTCEEEECSC
T ss_pred CCCEEEEEeC----chhHHHHHHHHHHHHHCCCEEEEeCC
Confidence 4578877652 22 22 23467788889999885543
No 412
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=24.37 E-value=78 Score=26.63 Aligned_cols=38 Identities=8% Similarity=0.017 Sum_probs=24.5
Q ss_pred CCEEEEEcCCCc---cCHHHHHH-HHHHHHhCC--CeEEEEeCC
Q 010988 9 QPHFVLFPFLAQ---GHMIPMID-IGRLLAQNG--AAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~---GHi~p~l~-LA~~L~~rG--H~Vt~~~~~ 46 (496)
||||+++..... |+..-+.. +++.|.++| ++|.++-..
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~ 44 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLA 44 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETT
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 468877665433 66666554 566777766 888877654
No 413
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=24.33 E-value=1.4e+02 Score=25.36 Aligned_cols=93 Identities=15% Similarity=0.069 Sum_probs=0.0
Q ss_pred CeEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccc
Q 010988 281 NSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHP 360 (496)
Q Consensus 281 ~~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~ 360 (496)
++..+||.|.... ...+..++....+-++|=++.... ...+....-....+.+..+---+.++..-
T Consensus 32 ~g~~lV~GGg~~G----iM~aa~~gA~~~gG~~iGv~p~~l----------~~~e~~~~~~~~~~~~~~~~~Rk~~~~~~ 97 (191)
T 1t35_A 32 QGIGLVYGGSRVG----LMGTIADAIMENGGTAIGVMPSGL----------FSGEVVHQNLTELIEVNGMHERKAKMSEL 97 (191)
T ss_dssp TTCEEEECCCCSH----HHHHHHHHHHTTTCCEEEEEETTC----------CHHHHTTCCCSEEEEESHHHHHHHHHHHH
T ss_pred CCCEEEECCCccc----HHHHHHHHHHHcCCeEEEEeCchh----------cccccccCCCCccccCCCHHHHHHHHHHH
Q ss_pred cccccccCCChhhHHHHHH---------hCCcEecc
Q 010988 361 SIGGFLTHCGWNSSLEAIS---------AGVPMITW 387 (496)
Q Consensus 361 ~~~~~I~HGG~gs~~eal~---------~GvP~v~~ 387 (496)
+-..++--||.||+-|... +++|++.+
T Consensus 98 sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll 133 (191)
T 1t35_A 98 ADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLY 133 (191)
T ss_dssp CSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEE
T ss_pred CCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEe
No 414
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=24.33 E-value=2e+02 Score=23.71 Aligned_cols=48 Identities=8% Similarity=-0.011 Sum_probs=32.6
Q ss_pred hCCcEeccCCccccchhHHHHHHHhhceEEecccCCCCCCcccccccccCHHHHHHHHHHHhcC
Q 010988 380 AGVPMITWPLFGDQFCNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINMLMNE 443 (496)
Q Consensus 380 ~GvP~v~~P~~~DQ~~na~r~~e~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~lL~~ 443 (496)
..+|+|++--..|. .....+ -+.|+--.+.+- ++.++|..+|..++..
T Consensus 78 ~~~~ii~lt~~~~~-~~~~~a-~~~ga~~~l~KP--------------~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 78 PRTTLVALVEYESP-AVLSQI-IELECHGVITQP--------------LDAHRVLPVLVSARRI 125 (196)
T ss_dssp TTCEEEEEECCCSH-HHHHHH-HHHTCSEEEESS--------------CCGGGHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCh-HHHHHH-HHcCCCeeEecC--------------cCHHHHHHHHHHHHHH
Confidence 45788777655443 355555 367776666554 7888999999888753
No 415
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=24.33 E-value=56 Score=28.39 Aligned_cols=34 Identities=9% Similarity=0.175 Sum_probs=23.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
||+++++.++ |-+- .++|+.|+++|++|+++.-.
T Consensus 1 Mk~vlVTGas-~gIG--~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGAS-SGLG--AELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTT-SHHH--HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCC-chHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4666666544 3232 57899999999999888654
No 416
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=24.27 E-value=68 Score=29.36 Aligned_cols=35 Identities=6% Similarity=-0.019 Sum_probs=22.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++++|++. ++.|-+- ..|+++|.++||+|+.+.-.
T Consensus 11 ~~~~vlVT--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 11 GSMRALIT--GVAGFVG--KYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp --CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CcceEEEE--CCCChHH--HHHHHHHHHCCCEEEEEecC
Confidence 45565554 3344443 46889999999999988654
No 417
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=24.26 E-value=46 Score=29.63 Aligned_cols=34 Identities=12% Similarity=-0.002 Sum_probs=24.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+||||.|+-.+..| ..+++.|.+.||+|+++...
T Consensus 2 ~~m~i~iiG~G~mG-----~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 2 NAMKIGIIGVGKMA-----SAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHTTSSCEEEEECSS
T ss_pred CccEEEEECCCHHH-----HHHHHHHHhCCCeEEEECCC
Confidence 46799998765555 35788899999999876543
No 418
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=24.21 E-value=3e+02 Score=22.70 Aligned_cols=145 Identities=18% Similarity=0.101 Sum_probs=73.6
Q ss_pred eEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEEEEeC-CCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccc
Q 010988 282 SVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRG-GNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHP 360 (496)
Q Consensus 282 ~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~~~~-~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~ 360 (496)
|.|-|-+||.+. -...+.+...++.++..+-..+.+ +. .|+.+.+. +... ...
T Consensus 6 p~V~IimgS~SD--~~v~~~a~~~l~~~gi~~ev~V~SaHR----------tp~~l~~~-----------~~~~---~~~ 59 (166)
T 3oow_A 6 VQVGVIMGSKSD--WSTMKECCDILDNLGIGYECEVVSAHR----------TPDKMFDY-----------AETA---KER 59 (166)
T ss_dssp EEEEEEESSGGG--HHHHHHHHHHHHHTTCEEEEEECCTTT----------CHHHHHHH-----------HHHT---TTT
T ss_pred CeEEEEECcHHh--HHHHHHHHHHHHHcCCCEEEEEEcCcC----------CHHHHHHH-----------HHHH---HhC
Confidence 456677777653 455667777888888766443333 33 34332221 1110 011
Q ss_pred cccccccCCChh----hHHHHHHhCCcEeccCCccccc---hhHHHHHH-HhhceEEe-cccCCCCCCcccccccccCHH
Q 010988 361 SIGGFLTHCGWN----SSLEAISAGVPMITWPLFGDQF---CNEKLIVQ-VLNIGVRI-GVEVPLDFGEEEEIGVLVKKE 431 (496)
Q Consensus 361 ~~~~~I~HGG~g----s~~eal~~GvP~v~~P~~~DQ~---~na~r~~e-~~G~g~~l-~~~~~~~~~~~~~~~~~~~~~ 431 (496)
.++++|.=.|.- ++.-++ .-+|+|.+|...-.. +--.-+++ -.|+++.. ..+ +.+.+++.
T Consensus 60 g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~----------~ag~~nAa 128 (166)
T 3oow_A 60 GLKVIIAGAGGAAHLPGMVAAK-TTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIG----------MAGAKNAA 128 (166)
T ss_dssp TCCEEEEEECSSCCHHHHHHHT-CSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCST----------HHHHHHHH
T ss_pred CCcEEEEECCcchhhHHHHHhc-cCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecC----------CccchHHH
Confidence 122366544433 333332 457999999854311 11111110 12333322 111 00135666
Q ss_pred HHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhC
Q 010988 432 DVVKAINMLMNEGGERENRRKRAREFQMMAKRATEET 468 (496)
Q Consensus 432 ~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~ 468 (496)
-+...|..+ .|+ .++++.+.+++.+++.+.+.
T Consensus 129 ~lAa~Il~~-~d~----~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 129 LFAASILQH-TDI----NIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp HHHHHHHGG-GCH----HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHcC-CCH----HHHHHHHHHHHHHHHHHHhc
Confidence 666666543 556 88999999998888776553
No 419
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=24.21 E-value=1.7e+02 Score=25.35 Aligned_cols=36 Identities=14% Similarity=0.118 Sum_probs=23.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
++.++ ++++. +.|-+- ..++++|+++|++|+++.-.
T Consensus 9 ~~~~~-vlVtG-asggiG--~~la~~l~~~G~~V~~~~r~ 44 (255)
T 1fmc_A 9 LDGKC-AIITG-AGAGIG--KEIAITFATAGASVVVSDIN 44 (255)
T ss_dssp CTTCE-EEETT-TTSHHH--HHHHHHHHTTTCEEEEEESC
T ss_pred CCCCE-EEEEC-CccHHH--HHHHHHHHHCCCEEEEEcCC
Confidence 33444 45553 334333 47899999999999987654
No 420
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=24.18 E-value=1.3e+02 Score=21.94 Aligned_cols=33 Identities=15% Similarity=0.110 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
.-+|+++|..+ ......+..|.+.||+|..+..
T Consensus 56 ~~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 56 NETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp TSEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 35788888443 4567788999999998876644
No 421
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=24.09 E-value=1e+02 Score=26.57 Aligned_cols=42 Identities=17% Similarity=0.258 Sum_probs=27.2
Q ss_pred CCCCCCEEEEEcCCCccCHH---HHHHHHHHHHhCCCeEEEEeCC
Q 010988 5 GSSQQPHFVLFPFLAQGHMI---PMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~---p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+.+..+|+++...+.+.-. .+..+++.|.++|++|.++-.+
T Consensus 1 ~~~~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p 45 (243)
T 1ycd_A 1 MTVQIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAP 45 (243)
T ss_dssp --CCCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCS
T ss_pred CCCcCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCC
Confidence 44556677777654433221 2447899999999999888666
No 422
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=24.05 E-value=67 Score=31.07 Aligned_cols=41 Identities=17% Similarity=-0.002 Sum_probs=26.0
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 010988 5 GSSQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPAN 48 (496)
Q Consensus 5 ~~~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~ 48 (496)
|+...++.++++ ++.|-+- ..|+++|.++|++|+.+.-...
T Consensus 64 ~~~~~~~~vlVT-GatG~iG--~~l~~~L~~~g~~V~~~~R~~~ 104 (427)
T 4f6c_A 64 LSHRPLGNTLLT-GATGFLG--AYLIEALQGYSHRIYCFIRADN 104 (427)
T ss_dssp SCCCCCEEEEEE-CTTSHHH--HHHHHHHTTTEEEEEEEEECSS
T ss_pred CCCCCCCEEEEe-cCCcHHH--HHHHHHHHcCCCEEEEEECCCC
Confidence 333344445555 3344443 4788899999999998876544
No 423
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=24.04 E-value=84 Score=27.85 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
-|+++++..+.| +- .++|++|+++|++|+++.-.
T Consensus 8 gk~~lVTGas~g-IG--~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 8 GKKAIVIGGTHG-MG--LATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp TCEEEEETCSSH-HH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 367777755432 22 57899999999999987654
No 424
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=24.00 E-value=68 Score=29.55 Aligned_cols=35 Identities=11% Similarity=0.099 Sum_probs=23.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+++||++.- +.|-+- ..|+++|.++||+|+.+.-.
T Consensus 13 ~~~~vlVTG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 13 MTRSALVTG--ITGQDG--AYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp --CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred cCCeEEEEC--CCChHH--HHHHHHHHHCCCeEEEEeCC
Confidence 456776664 334333 46889999999999988754
No 425
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=23.93 E-value=78 Score=27.90 Aligned_cols=33 Identities=12% Similarity=-0.007 Sum_probs=22.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++..+ |-+- ..++++|+++|++|+++.-.
T Consensus 8 k~vlVTGas-~giG--~~ia~~l~~~G~~V~~~~r~ 40 (250)
T 2fwm_X 8 KNVWVTGAG-KGIG--YATALAFVEAGAKVTGFDQA 40 (250)
T ss_dssp CEEEEESTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-cHHH--HHHHHHHHHCCCEEEEEeCc
Confidence 445555333 3332 46899999999999987654
No 426
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=23.88 E-value=59 Score=29.52 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=23.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCCc
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNG-AAITIVTTPA 47 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rG-H~Vt~~~~~~ 47 (496)
++|++. ++.|.+- ..++++|.++| |+|+.++-..
T Consensus 6 ~~ilVt--GatG~iG--~~l~~~L~~~g~~~V~~~~R~~ 40 (299)
T 2wm3_A 6 KLVVVF--GGTGAQG--GSVARTLLEDGTFKVRVVTRNP 40 (299)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHHCSSEEEEEESCT
T ss_pred CEEEEE--CCCchHH--HHHHHHHHhcCCceEEEEEcCC
Confidence 455544 3445443 45788999988 9999987654
No 427
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=23.88 E-value=72 Score=29.48 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=21.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
++|++.- +.|-+- ..|+++|.++||+|+.+.-
T Consensus 10 ~~vlVTG--atGfIG--~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 10 KTACVVG--GTGFVA--SLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CEEEEEC--TTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC--CchHHH--HHHHHHHHHCCCEEEEEEc
Confidence 4554443 344333 3678999999999997654
No 428
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=23.86 E-value=25 Score=32.39 Aligned_cols=32 Identities=19% Similarity=0.072 Sum_probs=26.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|||+|+-.++.|- .+|..|+++||+|+++...
T Consensus 3 mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 6899998777774 5788899999999998765
No 429
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=23.84 E-value=41 Score=32.16 Aligned_cols=35 Identities=14% Similarity=0.223 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
+++.+|+|+-.+-.| +.+|..|+++|++|+++--.
T Consensus 4 ~~~~dVvIVGaG~aG-----l~~A~~L~~~G~~V~viE~~ 38 (399)
T 2x3n_A 4 DNHIDVLINGCGIGG-----AMLAYLLGRQGHRVVVVEQA 38 (399)
T ss_dssp -CEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHhCCCcEEEEeCC
Confidence 445688888766555 67888999999999998643
No 430
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=23.81 E-value=3.6e+02 Score=25.10 Aligned_cols=110 Identities=15% Similarity=0.105 Sum_probs=62.1
Q ss_pred eEEEEeeCCccCCChhhHHHHHHHHHhC-CCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccc
Q 010988 282 SVVYVCLGSICNLTSSQMIELGLGLEAS-KKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHP 360 (496)
Q Consensus 282 ~vI~vs~GS~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~ 360 (496)
.+.+|++|.+.. ..+.++... +.+++.+..... +... .....++ .-|-...++|..+
T Consensus 7 ~vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~------------~~~~-~a~~~g~--~~~~~~~~ll~~~ 64 (359)
T 3e18_A 7 QLVIVGYGGMGS-------YHVTLASAADNLEVHGVFDILA------------EKRE-AAAQKGL--KIYESYEAVLADE 64 (359)
T ss_dssp EEEEECCSHHHH-------HHHHHHHTSTTEEEEEEECSSH------------HHHH-HHHTTTC--CBCSCHHHHHHCT
T ss_pred cEEEECcCHHHH-------HHHHHHHhCCCcEEEEEEcCCH------------HHHH-HHHhcCC--ceeCCHHHHhcCC
Confidence 378888887653 234455554 555544443332 1111 0112233 2355677888877
Q ss_pred cccccccCCChh----hHHHHHHhCCcEec-cCCc--cccchhHHHHHHHhhceEEeccc
Q 010988 361 SIGGFLTHCGWN----SSLEAISAGVPMIT-WPLF--GDQFCNEKLIVQVLNIGVRIGVE 413 (496)
Q Consensus 361 ~~~~~I~HGG~g----s~~eal~~GvP~v~-~P~~--~DQ~~na~r~~e~~G~g~~l~~~ 413 (496)
++++++--.... -+.+|+.+|+++++ =|+. .++..-...++++.|+-+.+...
T Consensus 65 ~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~ 124 (359)
T 3e18_A 65 KVDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQN 124 (359)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECG
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEee
Confidence 777777655544 36688999999987 3543 34444433333677776666543
No 431
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=23.75 E-value=1.3e+02 Score=27.03 Aligned_cols=33 Identities=18% Similarity=0.349 Sum_probs=23.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++..+.| +- .++|++|+++|++|.++.-.
T Consensus 10 k~vlVTGas~G-IG--~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 10 KTMFISGGSRG-IG--LAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp CEEEEESCSSH-HH--HHHHHHHHTTTCEEEEEESC
T ss_pred CEEEEECCCCH-HH--HHHHHHHHHCCCEEEEEECC
Confidence 56666654432 22 57899999999999988654
No 432
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=23.73 E-value=88 Score=27.16 Aligned_cols=36 Identities=11% Similarity=0.051 Sum_probs=24.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQN--GAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~r--GH~Vt~~~~~ 46 (496)
+++++|++.. +.|-+- ..|+++|.++ ||+|+.+.-.
T Consensus 2 ~~~~~ilVtG--asG~iG--~~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 2 ANLPTVLVTG--ASGRTG--QIVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp CSCCEEEEES--TTSHHH--HHHHHHHHHTTTTCEEEEEESC
T ss_pred CCCCEEEEEc--CCcHHH--HHHHHHHHhcCCCcEEEEEEcC
Confidence 4566776654 333332 4688999999 8999988764
No 433
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=23.63 E-value=71 Score=32.06 Aligned_cols=42 Identities=19% Similarity=0.224 Sum_probs=34.6
Q ss_pred CCEEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 010988 9 QPHFVLFPFLA---QGHMIPMIDIGRLLAQNGAAITIVTTPANAA 50 (496)
Q Consensus 9 ~~~il~~~~~~---~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (496)
++|.+|++.+. .|-=.-...|+..|..||++||+.=.++|.+
T Consensus 2 ~~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpyln 46 (535)
T 3nva_A 2 PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYIN 46 (535)
T ss_dssp CCEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSS
T ss_pred CceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCccee
Confidence 46999999763 6677788999999999999999997666554
No 434
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=23.62 E-value=96 Score=27.75 Aligned_cols=33 Identities=18% Similarity=0.161 Sum_probs=22.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++..+ |-+ =..+++.|+++|++|+++.-.
T Consensus 10 k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r~ 42 (270)
T 1yde_A 10 KVVVVTGGG-RGI--GAGIVRAFVNSGARVVICDKD 42 (270)
T ss_dssp CEEEEETCS-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 555666443 322 257899999999999987654
No 435
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=23.62 E-value=82 Score=28.48 Aligned_cols=36 Identities=17% Similarity=0.184 Sum_probs=29.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|.|..-++-|-..-...||..|+++|++|.++=..
T Consensus 4 vIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 455554577999999999999999999999988433
No 436
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=23.47 E-value=3.2e+02 Score=22.66 Aligned_cols=141 Identities=17% Similarity=0.150 Sum_probs=72.9
Q ss_pred CeEEEEeeCCccCCChhhHHHHHHHHHhCCCCeEEEEeC-CCCCchhhhhhhhhHHHHHHh---CCCcEEEeCcchhhhh
Q 010988 281 NSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRG-GNNTSKEIQEWLLEEKFEERV---KGRGILILGWAPQVLI 356 (496)
Q Consensus 281 ~~vI~vs~GS~~~~~~~~~~~~~~a~~~~~~~~i~~~~~-~~~~~~~~~~~~lp~~~~~~~---~~~nv~v~~~~pq~~~ 356 (496)
++.|-|-+||.+. -...+.+...++.++..+-..+.+ +. .|+.+.+.. ...++
T Consensus 6 ~~~V~IimgS~SD--~~v~~~a~~~l~~~gi~~ev~V~SaHR----------~p~~~~~~~~~a~~~g~----------- 62 (169)
T 3trh_A 6 KIFVAILMGSDSD--LSTMETAFTELKSLGIPFEAHILSAHR----------TPKETVEFVENADNRGC----------- 62 (169)
T ss_dssp CCEEEEEESCGGG--HHHHHHHHHHHHHTTCCEEEEECCTTT----------SHHHHHHHHHHHHHTTE-----------
T ss_pred CCcEEEEECcHHh--HHHHHHHHHHHHHcCCCEEEEEEcccC----------CHHHHHHHHHHHHhCCC-----------
Confidence 3467777777653 455667778888888876544333 33 343322211 01112
Q ss_pred hccccccccccCCChh----hHHHHHHhCCcEeccCCccccc-hhH--HHHHHH--hhceEE-ecccCCCCCCccccccc
Q 010988 357 LSHPSIGGFLTHCGWN----SSLEAISAGVPMITWPLFGDQF-CNE--KLIVQV--LNIGVR-IGVEVPLDFGEEEEIGV 426 (496)
Q Consensus 357 l~~~~~~~~I~HGG~g----s~~eal~~GvP~v~~P~~~DQ~-~na--~r~~e~--~G~g~~-l~~~~~~~~~~~~~~~~ 426 (496)
+++|.=.|.- ++.-+ ..-+|+|.+|...-.. ... .-++ + .|+.+. +..+ +..
T Consensus 63 ------~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~v-qmp~GvPVatV~I~----------~a~ 124 (169)
T 3trh_A 63 ------AVFIAAAGLAAHLAGTIAA-HTLKPVIGVPMAGGSLGGLDALLSTV-QMPGGVPVACTAIG----------KAG 124 (169)
T ss_dssp ------EEEEEEECSSCCHHHHHHH-TCSSCEEEEECCCSTTTTHHHHHHHH-CCCTTSCCEECCST----------HHH
T ss_pred ------cEEEEECChhhhhHHHHHh-cCCCCEEEeecCCCCCCCHHHHHHhh-cCCCCCceEEEecC----------Ccc
Confidence 2255544433 33333 2357999999863211 222 2222 2 344211 1111 001
Q ss_pred ccCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhh
Q 010988 427 LVKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEE 467 (496)
Q Consensus 427 ~~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~ 467 (496)
.+++.-+...|..+ .|+ .++++.+..++.+++.+.+
T Consensus 125 ~~nAa~lAa~Il~~-~d~----~l~~kl~~~r~~~~~~v~~ 160 (169)
T 3trh_A 125 AKNAAILAAQIIAL-QDK----SIAQKLVQQRTAKRETLKK 160 (169)
T ss_dssp HHHHHHHHHHHHHT-TCH----HHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHcC-CCH----HHHHHHHHHHHHHHHHHHH
Confidence 45666666666544 555 7888888888887766533
No 437
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=23.45 E-value=2e+02 Score=25.54 Aligned_cols=33 Identities=21% Similarity=0.161 Sum_probs=23.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|.++++.++. -+- ..+|++|+++|++|+++...
T Consensus 30 k~vlITGas~-gIG--~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 30 KNVLITGASK-GIG--AEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp CEEEETTCSS-HHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCc-HHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5666665443 222 58899999999999988763
No 438
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=23.43 E-value=1.6e+02 Score=24.65 Aligned_cols=39 Identities=5% Similarity=-0.015 Sum_probs=29.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
+++||+|+..++.. ..-+....+.|.+.|++|+++....
T Consensus 22 ~~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 22 LSKKIAVLITDEFE-DSEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp CCCEEEEECCTTBC-THHHHHHHHHHHHTTCEEEEEESST
T ss_pred cCCEEEEEECCCCC-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 46789999887654 3445667788888999999998763
No 439
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=23.35 E-value=79 Score=26.85 Aligned_cols=37 Identities=11% Similarity=0.327 Sum_probs=28.6
Q ss_pred CEEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLA---QGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~---~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
-+|+|+|.-+ .---.+...|++.|.++|.+|.|..+|
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 4777777421 123457899999999999999999998
No 440
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=23.30 E-value=2.5e+02 Score=25.19 Aligned_cols=34 Identities=15% Similarity=0.157 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|+++++.++.| + =.++|++|+++|++|.++.-.
T Consensus 28 ~k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 28 SPVALITGAGSG-I--GRATALALAADGVTVGALGRT 61 (283)
T ss_dssp CCEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 366777755432 2 257899999999999987654
No 441
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=23.30 E-value=75 Score=29.40 Aligned_cols=37 Identities=24% Similarity=0.403 Sum_probs=24.7
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCc-chHHHHHhcCCCeEEEe
Q 010988 109 PLENLLKELAPKPSCIVSDMCYP-WTVDTAARFNIPRISFH 148 (496)
Q Consensus 109 ~l~~ll~~~~~~pDlVI~D~~~~-~a~~~A~~lgiP~v~~~ 148 (496)
.++++++- +||+||...... ....-.+..|||++.+.
T Consensus 76 n~E~i~~l---~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~ 113 (326)
T 3psh_A 76 NIESLLAL---KPDVVFVTNYAPSEMIKQISDVNIPVVAIS 113 (326)
T ss_dssp CHHHHHHT---CCSEEEEETTCCHHHHHHHHTTTCCEEEEC
T ss_pred CHHHHHcc---CCCEEEEeCCCChHHHHHHHHcCCCEEEEe
Confidence 45566654 999999875432 23334466899999854
No 442
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=23.26 E-value=1.6e+02 Score=21.39 Aligned_cols=37 Identities=11% Similarity=0.147 Sum_probs=22.8
Q ss_pred HHHHhcCCCCeEEEEcCCCc--chHHHHHh-----cCCCeEEEecc
Q 010988 112 NLLKELAPKPSCIVSDMCYP--WTVDTAAR-----FNIPRISFHGF 150 (496)
Q Consensus 112 ~ll~~~~~~pDlVI~D~~~~--~a~~~A~~-----lgiP~v~~~~~ 150 (496)
+.++. .+||+||.|...+ .+..+++. -++|.+.++..
T Consensus 39 ~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 39 KKFFS--GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHH--SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHhc--CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 34455 5899999996554 34444333 25788776544
No 443
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=23.26 E-value=1.1e+02 Score=29.00 Aligned_cols=34 Identities=3% Similarity=-0.187 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|.||+++..+ ..-..++++|.+.||+|.++.+..
T Consensus 1 M~~Ililg~g-----~~g~~~~~a~~~~G~~v~~~~~~~ 34 (380)
T 3ax6_A 1 MKKIGIIGGG-----QLGKMMTLEAKKMGFYVIVLDPTP 34 (380)
T ss_dssp CCEEEEECCS-----HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3588888753 235678888999999999887753
No 444
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=23.21 E-value=83 Score=27.69 Aligned_cols=38 Identities=5% Similarity=0.184 Sum_probs=25.3
Q ss_pred CCEEEEEcCCC--ccCHHHHHH-HHHHHHhC-CCeEEEEeCC
Q 010988 9 QPHFVLFPFLA--QGHMIPMID-IGRLLAQN-GAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~--~GHi~p~l~-LA~~L~~r-GH~Vt~~~~~ 46 (496)
||||+++.... .|+..-+.. +++.|.++ |++|.++-..
T Consensus 1 MmkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~dl~ 42 (242)
T 1sqs_A 1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPF 42 (242)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEECTT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 46887776543 366666554 46677777 9999887543
No 445
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=23.09 E-value=98 Score=27.16 Aligned_cols=33 Identities=21% Similarity=0.121 Sum_probs=22.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++..+ |-+ =..+++.|+++|++|+++.-.
T Consensus 6 k~vlVTGas-~gi--G~~ia~~l~~~G~~V~~~~r~ 38 (245)
T 1uls_A 6 KAVLITGAA-HGI--GRATLELFAKEGARLVACDIE 38 (245)
T ss_dssp CEEEEESTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 445555333 323 246889999999999987654
No 446
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=23.08 E-value=1.3e+02 Score=25.61 Aligned_cols=36 Identities=11% Similarity=0.086 Sum_probs=28.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.||+|+..++.- ..-+....+.|.+.|++|+++...
T Consensus 10 ~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (208)
T 3ot1_A 10 KRILVPVAHGSE-EMETVIIVDTLVRAGFQVTMAAVG 45 (208)
T ss_dssp CEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcC
Confidence 578888877643 455666778888999999999885
No 447
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=23.07 E-value=78 Score=29.61 Aligned_cols=27 Identities=19% Similarity=0.247 Sum_probs=22.4
Q ss_pred ChhhHHHHHHHHHhCCCCeEEEEeCCC
Q 010988 295 TSSQMIELGLGLEASKKPFIWVIRGGN 321 (496)
Q Consensus 295 ~~~~~~~~~~a~~~~~~~~i~~~~~~~ 321 (496)
+.+....+.+|+...+.+.||...++.
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 89 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGF 89 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCch
Confidence 455577799999999999999988876
No 448
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=23.02 E-value=1.4e+02 Score=25.66 Aligned_cols=37 Identities=3% Similarity=-0.014 Sum_probs=27.1
Q ss_pred CEEEEEcCC---------CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFL---------AQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~---------~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.||+|+... ..-...-+....+.|.+.|++|+++++.
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~ 51 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQ 51 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCC
Confidence 488888762 2233455677788888999999999875
No 449
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=22.94 E-value=64 Score=31.87 Aligned_cols=34 Identities=15% Similarity=0.342 Sum_probs=26.8
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEE
Q 010988 109 PLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISF 147 (496)
Q Consensus 109 ~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~ 147 (496)
.++++++. .+||++|.... ...+|+++|||++.+
T Consensus 366 ~le~~i~~--~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARA--GQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHH--HTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHh--cCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 35667777 69999999843 567899999999974
No 450
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=22.86 E-value=81 Score=26.86 Aligned_cols=37 Identities=16% Similarity=0.378 Sum_probs=28.7
Q ss_pred CEEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLA---QGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~---~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
-+|+|+|.-+ .=--.+...|++.|.++|.+|.|..+|
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 4777777421 223467889999999999999999998
No 451
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=22.82 E-value=49 Score=32.88 Aligned_cols=34 Identities=15% Similarity=0.248 Sum_probs=26.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
|+++||.|+-.+..| ..+|..|+++||+|+++..
T Consensus 3 m~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcC
Confidence 345789999766666 4578899999999987754
No 452
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=22.82 E-value=78 Score=27.30 Aligned_cols=37 Identities=0% Similarity=-0.043 Sum_probs=21.0
Q ss_pred CCEEEEEcCCCc----cCHHHH-HHHHHHHHhC--CCeEEEEeC
Q 010988 9 QPHFVLFPFLAQ----GHMIPM-IDIGRLLAQN--GAAITIVTT 45 (496)
Q Consensus 9 ~~~il~~~~~~~----GHi~p~-l~LA~~L~~r--GH~Vt~~~~ 45 (496)
||||+++...-. |...-+ -.+++.|.++ ||+|+++-.
T Consensus 4 M~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL 47 (211)
T 3p0r_A 4 MTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDL 47 (211)
T ss_dssp CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEG
T ss_pred cCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 789987775433 222222 2345555555 888887643
No 453
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=22.76 E-value=90 Score=28.47 Aligned_cols=39 Identities=15% Similarity=0.305 Sum_probs=29.8
Q ss_pred CCCCEEEEEcCCCccCHHHH--HHHHHHHHhCC-CeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPM--IDIGRLLAQNG-AAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~--l~LA~~L~~rG-H~Vt~~~~~ 46 (496)
.++.|||++. +..+|-.+. ..|++.|.+.| ++|++...+
T Consensus 2 ~~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 4678999995 445886443 57788888888 999999775
No 454
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=22.74 E-value=71 Score=23.55 Aligned_cols=59 Identities=17% Similarity=0.202 Sum_probs=34.7
Q ss_pred cCHHHHHHHHHHHhcCChh---HHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHhcCCCCCC
Q 010988 428 VKKEDVVKAINMLMNEGGE---RENRRKRAREFQMMAKRATEETGSSSLMIKLLIQDIMHQPHSDH 490 (496)
Q Consensus 428 ~~~~~l~~~i~~lL~~~~~---~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~ 490 (496)
--.++|..++.++-.+++. -.+|.....++.- ++.+ ..+..+.+.++.+.|+++.|..|
T Consensus 31 ~~~~~l~~Al~~L~~~psNPa~LAe~Qa~lseynl-~RNa---QSntiKa~KD~~qaI~~~~~~~~ 92 (92)
T 2g0u_A 31 DLNKQLQDAQANLTKNPSDPTALANYQMIMSEYNL-YRNA---QSSAVKSMKDIDSSILEHHHHHH 92 (92)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH-HHHH---HHHHHHTHHHHTTSCCCCCCSCC
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHhcccCC
Confidence 3456677777776444432 2233333333332 2222 35677888999999999877554
No 455
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=22.72 E-value=89 Score=29.41 Aligned_cols=34 Identities=3% Similarity=-0.325 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|.||+++..+ .-...+++++.+.||+|+++.+..
T Consensus 1 M~~Ililg~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 34 (365)
T 2z04_A 1 MLTVGILGGG-----QLGWMTILEGRKLGFKFHVLEDKE 34 (365)
T ss_dssp -CEEEEECCS-----HHHHHHHHHHGGGTCEEEEECSSS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4588888643 346788999999999999887653
No 456
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=22.69 E-value=61 Score=29.43 Aligned_cols=32 Identities=19% Similarity=0.311 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 588888765555 46789999999999977543
No 457
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=22.62 E-value=4.2e+02 Score=23.76 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=24.0
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCc----chHHHHHhcCCCeEEEe
Q 010988 109 PLENLLKELAPKPSCIVSDMCYP----WTVDTAARFNIPRISFH 148 (496)
Q Consensus 109 ~l~~ll~~~~~~pDlVI~D~~~~----~a~~~A~~lgiP~v~~~ 148 (496)
.++.++.. ++|.||...... .....+...|||+|.+.
T Consensus 51 ~i~~~~~~---~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~ 91 (330)
T 3uug_A 51 QIENMVTK---GVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYD 91 (330)
T ss_dssp HHHHHHHH---TCSEEEECCSSGGGGHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHc---CCCEEEEEcCCchhHHHHHHHHHHCCCCEEEEC
Confidence 34455555 799999876543 12445667899999854
No 458
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=22.61 E-value=1.3e+02 Score=22.28 Aligned_cols=39 Identities=15% Similarity=0.168 Sum_probs=24.1
Q ss_pred HHHHHhcCCCCeEEEEcCCCc--chHHHHHh----cCCCeEEEecch
Q 010988 111 ENLLKELAPKPSCIVSDMCYP--WTVDTAAR----FNIPRISFHGFS 151 (496)
Q Consensus 111 ~~ll~~~~~~pDlVI~D~~~~--~a~~~A~~----lgiP~v~~~~~~ 151 (496)
.+.++. .+||+||.|...+ .+..+++. -.+|.+.++...
T Consensus 39 ~~~~~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 39 REIMQN--QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp HHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred HHHHhc--CCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 344555 5899999996554 34444443 357777765544
No 459
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=22.60 E-value=3.2e+02 Score=24.57 Aligned_cols=34 Identities=21% Similarity=0.146 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|+++++.++.| + =.++|+.|+++|++|+++...
T Consensus 28 gk~~lVTGas~G-I--G~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 28 GKVAFITGAARG-Q--GRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp TCEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEecc
Confidence 367777755432 2 257899999999999987543
No 460
>3mzv_A Decaprenyl diphosphate synthase; transferase, structural genomics, PSI-2, protein structure initiative; 1.90A {Rhodobacter capsulatus}
Probab=22.60 E-value=1.6e+02 Score=27.70 Aligned_cols=64 Identities=22% Similarity=0.257 Sum_probs=39.2
Q ss_pred cCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCC--ChHHHHHHHHHHHhcCCCCCCcc
Q 010988 428 VKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETG--SSSLMIKLLIQDIMHQPHSDHQH 492 (496)
Q Consensus 428 ~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g--~~~~~~~~~~~~~~~~~~~~~~~ 492 (496)
.+.+++.+. .+++.+.+--+..++.++++.+++.++++.=+ .....+.+|+..+.+-.|..|.|
T Consensus 273 ~~~~~~~~i-~~~l~~~ga~~~a~~~a~~~~~~A~~~L~~lp~~~~~~~L~~la~~~~~r~~~~~~~ 338 (341)
T 3mzv_A 273 QQDGDLEHA-MALMTKHGTLEATRLAAIGWTDTARKALAKLPDHPLRQMLDDLADYVVERVREGHHH 338 (341)
T ss_dssp CCTTHHHHH-HHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTGGGC-----
T ss_pred CCHHHHHHH-HHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhcccccccc
Confidence 455556444 44554444455677888888888888877654 34567888888887776666655
No 461
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=22.59 E-value=1.8e+02 Score=25.41 Aligned_cols=35 Identities=14% Similarity=0.116 Sum_probs=26.1
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEEec
Q 010988 109 PLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISFHG 149 (496)
Q Consensus 109 ~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~~ 149 (496)
.+.++.+ .++|+||.|.. ...+|+++|+|.+.+.+
T Consensus 146 ~i~~l~~---~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 146 QINELKA---NGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHH---TTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHH---CCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 3444444 48999999843 46789999999998763
No 462
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=22.54 E-value=48 Score=31.86 Aligned_cols=43 Identities=9% Similarity=-0.052 Sum_probs=29.0
Q ss_pred CCCCCCCEEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeCC
Q 010988 4 EGSSQQPHFVLFPFLAQGHM----IPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 4 ~~~~~~~~il~~~~~~~GHi----~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|.-|+++||+++..+..+-- ..-..++++|.+.||+|+.+...
T Consensus 17 ~~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 17 QGHMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp ----CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred hhhcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 33467889988886643332 34457889998899999988754
No 463
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=22.49 E-value=58 Score=30.39 Aligned_cols=37 Identities=19% Similarity=0.218 Sum_probs=24.7
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCeEEEe
Q 010988 109 PLENLLKELAPKPSCIVSDMCYPWTVDTAARFNIPRISFH 148 (496)
Q Consensus 109 ~l~~ll~~~~~~pDlVI~D~~~~~a~~~A~~lgiP~v~~~ 148 (496)
.++++++- +||+||..........-.+..|||++.+.
T Consensus 108 n~E~i~al---~PDLIi~~~~~~~~~~~L~~~gipvv~~~ 144 (335)
T 4hn9_A 108 NTEACVAA---TPDVVFLPMKLKKTADTLESLGIKAVVVN 144 (335)
T ss_dssp CHHHHHHT---CCSEEEEEGGGHHHHHHHHHTTCCEEEEC
T ss_pred CHHHHHhc---CCCEEEEeCcchhHHHHHHHcCCCEEEEc
Confidence 45666664 99999987532223334466899999864
No 464
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=22.39 E-value=2.5e+02 Score=25.00 Aligned_cols=35 Identities=23% Similarity=0.113 Sum_probs=26.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
-|+++++..+.| +- .++|+.|++.|.+|.++....
T Consensus 7 gKvalVTGas~G-IG--~aia~~la~~Ga~Vv~~~r~~ 41 (258)
T 4gkb_A 7 DKVVIVTGGASG-IG--GAISMRLAEERAIPVVFARHA 41 (258)
T ss_dssp TCEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEeCCCCH-HH--HHHHHHHHHcCCEEEEEECCc
Confidence 478888876644 22 678999999999999887543
No 465
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=22.38 E-value=1.1e+02 Score=24.07 Aligned_cols=40 Identities=23% Similarity=0.245 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCeEEEEcCCCc--chHHHHHhc-------CCCeEEEec
Q 010988 108 LPLENLLKELAPKPSCIVSDMCYP--WTVDTAARF-------NIPRISFHG 149 (496)
Q Consensus 108 ~~l~~ll~~~~~~pDlVI~D~~~~--~a~~~A~~l-------giP~v~~~~ 149 (496)
.+..+.++. .+||+||.|...+ .+..+++.+ ++|.+.++.
T Consensus 41 ~~al~~l~~--~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~ 89 (154)
T 3gt7_A 41 REAVRFLSL--TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTI 89 (154)
T ss_dssp HHHHHHHTT--CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEEC
T ss_pred HHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEEC
No 466
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=22.37 E-value=52 Score=30.62 Aligned_cols=36 Identities=8% Similarity=0.048 Sum_probs=22.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.++++|++.- +.|.+- ..|+++|.++||+|+.+.-.
T Consensus 17 ~~~~~vlVtG--atG~iG--~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 17 RGSHMILVTG--SAGRVG--RAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ----CEEEET--TTSHHH--HHHHHHHHHTTCCEEEEESS
T ss_pred cCCCEEEEEC--CCChHH--HHHHHHHHhCCCEEEEEeCC
Confidence 3456666654 344443 36789999999999988654
No 467
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=22.33 E-value=1.5e+02 Score=22.26 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=22.6
Q ss_pred HHHHhcCCCCeEEEEcCCCc--chHHHHH---h----cCCCeEEEecc
Q 010988 112 NLLKELAPKPSCIVSDMCYP--WTVDTAA---R----FNIPRISFHGF 150 (496)
Q Consensus 112 ~ll~~~~~~pDlVI~D~~~~--~a~~~A~---~----lgiP~v~~~~~ 150 (496)
+.++. .+||+||.|.... .+..+++ . -++|.+.++..
T Consensus 41 ~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 41 QQALA--HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp HHHHH--SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred HHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 44455 5899999996544 3333332 2 26788876543
No 468
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=22.26 E-value=66 Score=28.64 Aligned_cols=29 Identities=10% Similarity=0.143 Sum_probs=22.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 010988 10 PHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIV 43 (496)
Q Consensus 10 ~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~ 43 (496)
|||.|+-.+..|. .+|+.|++.||+|++.
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTS 29 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEEC
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEe
Confidence 4888886655553 5789999999999985
No 469
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=22.22 E-value=82 Score=28.74 Aligned_cols=41 Identities=7% Similarity=0.184 Sum_probs=32.4
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 010988 8 QQPHFVLFPF--LAQGHMIPMIDIGRLLAQNGAAITIVTTPAN 48 (496)
Q Consensus 8 ~~~~il~~~~--~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~ 48 (496)
++.|+++++. ++-|-..-...||..|++.|.+|.++-.+..
T Consensus 90 ~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 90 AQNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TTCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 4456665554 5689999999999999999999999865543
No 470
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=22.14 E-value=86 Score=23.88 Aligned_cols=38 Identities=11% Similarity=0.059 Sum_probs=26.9
Q ss_pred CCEEEEE--cCCCccCHHHHH-HHHHHHHhCCCeEEEEeCC
Q 010988 9 QPHFVLF--PFLAQGHMIPMI-DIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~--~~~~~GHi~p~l-~LA~~L~~rGH~Vt~~~~~ 46 (496)
+|||+.+ |..+.-|.+... .|-++-.++||+|.+=+..
T Consensus 2 ~mkivaVtaCptGiAhTymAAeaLekaA~~~G~~ikVEtqg 42 (106)
T 2m1z_A 2 KRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQG 42 (106)
T ss_dssp CCEEEEEEECSSCHHHHHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred CccEEEEEECCCcHHHHHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3688777 555688988844 4555555679999988754
No 471
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=22.13 E-value=86 Score=26.68 Aligned_cols=38 Identities=5% Similarity=0.088 Sum_probs=23.2
Q ss_pred CCEEEEEcC-CC---ccCHHHHHH-HHHHHHhCC--CeEEEEeCC
Q 010988 9 QPHFVLFPF-LA---QGHMIPMID-IGRLLAQNG--AAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~-~~---~GHi~p~l~-LA~~L~~rG--H~Vt~~~~~ 46 (496)
||||+++.. +- .|+..-+.. +++.|.++| ++|+++-..
T Consensus 1 M~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL~ 45 (208)
T 2hpv_A 1 MSKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDVY 45 (208)
T ss_dssp -CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEETT
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeCC
Confidence 468866664 43 265555443 566777777 888877543
No 472
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=22.03 E-value=66 Score=28.47 Aligned_cols=32 Identities=13% Similarity=0.233 Sum_probs=22.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
|.++++. +.|-+- ..++++|+++|++|+++.-
T Consensus 15 k~vlITG-asggiG--~~~a~~l~~~G~~V~~~~r 46 (265)
T 1h5q_A 15 KTIIVTG-GNRGIG--LAFTRAVAAAGANVAVIYR 46 (265)
T ss_dssp EEEEEET-TTSHHH--HHHHHHHHHTTEEEEEEES
T ss_pred CEEEEEC-CCchHH--HHHHHHHHHCCCeEEEEeC
Confidence 4455553 333333 5789999999999998875
No 473
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=21.94 E-value=1.9e+02 Score=27.27 Aligned_cols=16 Identities=13% Similarity=-0.132 Sum_probs=9.7
Q ss_pred chHHHHHhcCCCeEEE
Q 010988 132 WTVDTAARFNIPRISF 147 (496)
Q Consensus 132 ~a~~~A~~lgiP~v~~ 147 (496)
+...+|+..+-|.++-
T Consensus 36 Avl~AAee~~sPvIlq 51 (349)
T 3elf_A 36 AAIKGFADAGSDGIIQ 51 (349)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCCEEEE
Confidence 4455666667776653
No 474
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=21.92 E-value=1e+02 Score=27.14 Aligned_cols=33 Identities=18% Similarity=0.219 Sum_probs=22.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++..+ |-+- .++|++|+++|++|+++.-.
T Consensus 10 k~vlITGas-~gIG--~~~a~~l~~~G~~V~~~~r~ 42 (261)
T 3n74_A 10 KVALITGAG-SGFG--EGMAKRFAKGGAKVVIVDRD 42 (261)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-chHH--HHHHHHHHHCCCEEEEEcCC
Confidence 455555443 2222 58899999999999988654
No 475
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=21.91 E-value=73 Score=30.33 Aligned_cols=35 Identities=11% Similarity=0.082 Sum_probs=23.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 7 SQQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 7 ~~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
.++++|++.-. .|-+- ..|+++|.++||+|+.+..
T Consensus 9 ~~~~~vlVTG~--tGfIG--~~l~~~L~~~G~~V~~~~r 43 (404)
T 1i24_A 9 HHGSRVMVIGG--DGYCG--WATALHLSKKNYEVCIVDN 43 (404)
T ss_dssp ---CEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred cCCCeEEEeCC--CcHHH--HHHHHHHHhCCCeEEEEEe
Confidence 35778877643 34443 4578999999999998864
No 476
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=21.83 E-value=64 Score=29.13 Aligned_cols=31 Identities=13% Similarity=0.081 Sum_probs=23.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
||||.|+-.+..|. .+|+.|.+ ||+|+++..
T Consensus 1 M~~i~iiG~G~~G~-----~~a~~l~~-g~~V~~~~~ 31 (289)
T 2cvz_A 1 MEKVAFIGLGAMGY-----PMAGHLAR-RFPTLVWNR 31 (289)
T ss_dssp -CCEEEECCSTTHH-----HHHHHHHT-TSCEEEECS
T ss_pred CCeEEEEcccHHHH-----HHHHHHhC-CCeEEEEeC
Confidence 46899997777764 46888989 999987754
No 477
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=21.74 E-value=1.3e+02 Score=22.10 Aligned_cols=33 Identities=12% Similarity=0.083 Sum_probs=23.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTT 45 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~ 45 (496)
..+|+++|..+ ......+..|.+.||+|.++..
T Consensus 56 ~~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 56 NEIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp TSEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CCeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 35788888543 3466778899999998876543
No 478
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A*
Probab=21.72 E-value=1.7e+02 Score=24.83 Aligned_cols=50 Identities=16% Similarity=0.178 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHhcCCCCCCcc
Q 010988 431 EDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSSSLMIKLLIQDIMHQPHSDHQH 492 (496)
Q Consensus 431 ~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 492 (496)
++..+.+.+++.-. .|.+...++++..++. ..-.+-++++...+|+.|.|
T Consensus 151 ~er~~~l~~i~g~~----~~~~~~~~l~~~~~~~--------~~~~~~l~~~~~~~~~~~~~ 200 (203)
T 3qks_A 151 EAREKVVREVLNLD----KFETAYKKLSELKKTI--------NNRIKEYRDILARTEGGHHH 200 (203)
T ss_dssp HHHHHHHHHHTCCC----TTHHHHHHHHHHHHHH--------HHHHHHHHHHHHTTCSSCC-
T ss_pred HHHHHHHHHHHCCH----HHHHHHHHHHHHHHHH--------HHHHHHHHHHHhhccCCccc
Confidence 67888888888766 4444444555554433 12223344555555555544
No 479
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=21.66 E-value=4.3e+02 Score=23.52 Aligned_cols=83 Identities=10% Similarity=-0.035 Sum_probs=0.0
Q ss_pred CCCEEEEEcCCCccCHHH--HHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCC
Q 010988 8 QQPHFVLFPFLAQGHMIP--MIDIGRLLAQNGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGIPEGSE 85 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p--~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~l~~~~~ 85 (496)
++.+|.++.......+.. ...+.+++.++|+++.+....
T Consensus 1 k~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~--------------------------------------- 41 (313)
T 3m9w_A 1 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSAN--------------------------------------- 41 (313)
T ss_dssp --CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEECT---------------------------------------
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCC---------------------------------------
Q ss_pred cccCCCchhhHHHHHHHHHhhhHHHHHHHHhcCCCCeEEEEcCCCcch----HHHHHhcCCCeEEE
Q 010988 86 NFDMLHSTDLLFNFFKSLTLLQLPLENLLKELAPKPSCIVSDMCYPWT----VDTAARFNIPRISF 147 (496)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlVI~D~~~~~a----~~~A~~lgiP~v~~ 147 (496)
.........++.++.. ++|.||........ ...+...|||+|.+
T Consensus 42 ---------------~~~~~~~~~i~~l~~~---~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~ 89 (313)
T 3m9w_A 42 ---------------GNEETQMSQIENMINR---GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 89 (313)
T ss_dssp ---------------TCHHHHHHHHHHHHHT---TCSEEEEECSSTTSCHHHHHHHHTTTCEEEEE
T ss_pred ---------------CCHHHHHHHHHHHHHc---CCCEEEEeCCChhhhHHHHHHHHHCCCeEEEE
No 480
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=21.61 E-value=2.6e+02 Score=24.39 Aligned_cols=33 Identities=18% Similarity=0.122 Sum_probs=23.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++..+ |-+- ..+++.|+++|++|+++.-.
T Consensus 3 k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 35 (256)
T 1geg_A 3 KVALVTGAG-QGIG--KAIALRLVKDGFAVAIADYN 35 (256)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-ChHH--HHHHHHHHHCCCEEEEEeCC
Confidence 566666443 3232 57899999999999987654
No 481
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=21.56 E-value=4.2e+02 Score=23.92 Aligned_cols=36 Identities=11% Similarity=0.086 Sum_probs=21.9
Q ss_pred HHHHHHhcCCC--CeEEEEcCCCcch----HHHHHhcCCCeEEEe
Q 010988 110 LENLLKELAPK--PSCIVSDMCYPWT----VDTAARFNIPRISFH 148 (496)
Q Consensus 110 l~~ll~~~~~~--pDlVI~D~~~~~a----~~~A~~lgiP~v~~~ 148 (496)
++.++.. + +|.||.-...... ...+...|||+|.+.
T Consensus 54 i~~l~~~---~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 95 (332)
T 2rjo_A 54 IRALLQK---TGGNLVLNVDPNDSADARVIVEACSKAGAYVTTIW 95 (332)
T ss_dssp HHHHHHH---TTTCEEEEECCSSHHHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHC---CCCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEEC
Confidence 4444544 6 9999886544321 223445799999854
No 482
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=21.52 E-value=5.1e+02 Score=24.30 Aligned_cols=38 Identities=8% Similarity=0.060 Sum_probs=30.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 010988 12 FVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPANA 49 (496)
Q Consensus 12 il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (496)
++++..++.|=..=++.++..+...|..|.|+..+...
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s~ 101 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHAL 101 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 34455567999999999999999999999999877543
No 483
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=21.51 E-value=71 Score=27.45 Aligned_cols=38 Identities=5% Similarity=-0.048 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCcc---CHHHHH-HHHHHHHhC--CCeEEEEeCC
Q 010988 9 QPHFVLFPFLAQG---HMIPMI-DIGRLLAQN--GAAITIVTTP 46 (496)
Q Consensus 9 ~~~il~~~~~~~G---Hi~p~l-~LA~~L~~r--GH~Vt~~~~~ 46 (496)
||||+++...-.+ +..-+. .+++.|.++ ||+|+++-..
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~ 44 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVG 44 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEESS
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 5788777654333 343333 456666666 8999887554
No 484
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=21.43 E-value=91 Score=27.22 Aligned_cols=40 Identities=5% Similarity=-0.014 Sum_probs=22.3
Q ss_pred CCCCEEEEEcCCCc-----cCHHHHH-HHHHHHHhC--CC-eEEEEeCC
Q 010988 7 SQQPHFVLFPFLAQ-----GHMIPMI-DIGRLLAQN--GA-AITIVTTP 46 (496)
Q Consensus 7 ~~~~~il~~~~~~~-----GHi~p~l-~LA~~L~~r--GH-~Vt~~~~~ 46 (496)
..||||+++...-. |...-+. .+++.|.++ || +|+++-..
T Consensus 2 ~~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~idL~ 50 (223)
T 3u7i_A 2 NAMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQINLY 50 (223)
T ss_dssp -CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEETT
T ss_pred CccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEECc
Confidence 46889987765332 3333332 344555554 58 88877543
No 485
>2p0t_A UPF0307 protein pspto_4464; APC85033, conserved putative protein, pseudomonas syringae P STR. DC3000, structural genomics, PSI-2; 2.19A {Pseudomonas syringae PV} SCOP: a.290.1.1
Probab=21.42 E-value=98 Score=26.00 Aligned_cols=57 Identities=11% Similarity=0.175 Sum_probs=38.1
Q ss_pred cCHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHhcCCCCCCccc
Q 010988 428 VKKEDVVKAINMLMNEGGERENRRKRAREFQMMAKRATEETGSSSLMIKLLIQDIMHQPHSDHQHI 493 (496)
Q Consensus 428 ~~~~~l~~~i~~lL~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 493 (496)
.+.+.|..++..+-+........-..+.+|++.+. + +| ..++.+|++ .||+.|-||+
T Consensus 82 ~D~e~I~~al~~~~~~~~~~~~~~h~lE~wRdrLi---~-~g--d~al~e~~~---~~P~~DrQ~L 138 (176)
T 2p0t_A 82 QDQEAILVLLDQLDASTRQYNERFHNLERWRDRLI---A-GD--DADLEKFVI---EYPDADRQQL 138 (176)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H-SC--HHHHHHHHH---HSTTSCHHHH
T ss_pred CCHHHHHHHHHHhhcccHHHHHHHHHHHHHHHHHH---h-CC--HHHHHHHHH---HCchhhHHHH
Confidence 57888999998776532222234456788888876 2 33 367777765 6788887775
No 486
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=21.37 E-value=76 Score=28.92 Aligned_cols=35 Identities=14% Similarity=0.103 Sum_probs=24.4
Q ss_pred CEEEEEcCCCcc-CHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 10 PHFVLFPFLAQG-HMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 10 ~~il~~~~~~~G-Hi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
.|+++++..+.| -+- .++|+.|+++|++|+++...
T Consensus 31 gk~~lVTGasg~~GIG--~aia~~la~~G~~V~~~~r~ 66 (293)
T 3grk_A 31 GKRGLILGVANNRSIA--WGIAKAAREAGAELAFTYQG 66 (293)
T ss_dssp TCEEEEECCCSSSSHH--HHHHHHHHHTTCEEEEEECS
T ss_pred CCEEEEEcCCCCCcHH--HHHHHHHHHCCCEEEEEcCC
Confidence 467777765421 132 47899999999999887654
No 487
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=21.36 E-value=29 Score=31.97 Aligned_cols=35 Identities=9% Similarity=-0.008 Sum_probs=26.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
++.+|+++-.+..| +..|..|+++|++|+++-...
T Consensus 6 ~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 6 KVYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred ccceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcCC
Confidence 34578888765455 577888999999999997654
No 488
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=21.35 E-value=1.2e+02 Score=26.66 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=22.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|.++++..+ |-+- ..+++.|+++|++|+++.-.
T Consensus 8 k~vlITGas-ggiG--~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 8 ALALVTGAG-SGIG--RAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCC-ChHH--HHHHHHHHHCCCEEEEEeCC
Confidence 455555333 3232 57899999999999988654
No 489
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=21.33 E-value=71 Score=28.24 Aligned_cols=37 Identities=14% Similarity=0.180 Sum_probs=25.2
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCc--chHHHHHhcCCCeEEEe
Q 010988 109 PLENLLKELAPKPSCIVSDMCYP--WTVDTAARFNIPRISFH 148 (496)
Q Consensus 109 ~l~~ll~~~~~~pDlVI~D~~~~--~a~~~A~~lgiP~v~~~ 148 (496)
.++++++- +||+||...... ....-.+..|+|++.+.
T Consensus 51 n~E~i~~l---~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 51 NAEGILAM---KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CHHHHHTT---CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHcc---CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 45666654 999999886543 23344566899999863
No 490
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=21.31 E-value=54 Score=30.06 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=22.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVT 44 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~ 44 (496)
+|||++.- +.|.+- ..|++.|.++||+|+.+.
T Consensus 3 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~v~~~~ 34 (321)
T 1e6u_A 3 KQRVFIAG--HRGMVG--SAIRRQLEQRGDVELVLR 34 (321)
T ss_dssp CEEEEEET--TTSHHH--HHHHHHHTTCTTEEEECC
T ss_pred CCEEEEEC--CCcHHH--HHHHHHHHhCCCeEEEEe
Confidence 45776653 444443 457899999999998764
No 491
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=21.25 E-value=92 Score=31.76 Aligned_cols=47 Identities=21% Similarity=0.268 Sum_probs=37.5
Q ss_pred CCCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHH
Q 010988 8 QQPHFVLFPF-LAQGHMIPMIDIGRLLAQNGAAITIVTTPANAARFKTV 55 (496)
Q Consensus 8 ~~~~il~~~~-~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~ 55 (496)
++.+++|++. ++-|-..-...+|..|+++|++|.++..+. .+.+...
T Consensus 6 ~~~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~-~~~l~~~ 53 (589)
T 1ihu_A 6 NIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP-ASNVGQV 53 (589)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT-TCCHHHH
T ss_pred CCCEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCC-CcCHHHH
Confidence 4567777766 569999999999999999999999998876 3444443
No 492
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=21.19 E-value=1.3e+02 Score=22.17 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=21.9
Q ss_pred CCCeEEEEcCCCc--chHHHHHh-----cCCCeEEEecchH
Q 010988 119 PKPSCIVSDMCYP--WTVDTAAR-----FNIPRISFHGFSC 152 (496)
Q Consensus 119 ~~pDlVI~D~~~~--~a~~~A~~-----lgiP~v~~~~~~~ 152 (496)
.+||+||.|...+ .+..+++. -++|.+.++....
T Consensus 46 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (120)
T 1tmy_A 46 LKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQ 86 (120)
T ss_dssp HCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCC
Confidence 4799999997654 34444433 3678887765543
No 493
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=21.07 E-value=92 Score=26.35 Aligned_cols=37 Identities=8% Similarity=-0.035 Sum_probs=25.0
Q ss_pred CCEEEEEcCCC--ccCHHHHHH-HHHH-HHhCCCeEEEEeC
Q 010988 9 QPHFVLFPFLA--QGHMIPMID-IGRL-LAQNGAAITIVTT 45 (496)
Q Consensus 9 ~~~il~~~~~~--~GHi~p~l~-LA~~-L~~rGH~Vt~~~~ 45 (496)
||||+++.... .|+..-+.. +++. |.++|++|.++-.
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~dl 42 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIHV 42 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEEG
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 56887776433 466666555 4566 7778999987754
No 494
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=21.06 E-value=69 Score=29.09 Aligned_cols=35 Identities=9% Similarity=0.103 Sum_probs=24.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 9 QPHFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 9 ~~~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
|++|++.. +.|.+- ..|+++|.++||+|+.++-..
T Consensus 2 ~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILG--PTGAIG--RHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEES--TTSTTH--HHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEEC--CCchHH--HHHHHHHHhCCCcEEEEECCC
Confidence 45666654 334443 357899999999999887653
No 495
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=21.01 E-value=87 Score=29.43 Aligned_cols=73 Identities=19% Similarity=0.217 Sum_probs=46.1
Q ss_pred CChhhHHHHHHHHHhCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhCCCcEEEeCcchhhhhhccccccccccCCChhh
Q 010988 294 LTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCGWNS 373 (496)
Q Consensus 294 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~~l~~~~~~~~I~HGG~gs 373 (496)
.+.+....+.+|+...+.+.||.+.++. .. . .+.++++...+-.+|.. ||-+.-.-.
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-g~---~-----------------rlL~~lD~~~i~~~PK~--~~GySDiTa 119 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGM-NS---N-----------------SLLPYIDYDAFQNNPKI--MIGYSDATA 119 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS-CG---G-----------------GGGGGSCHHHHHHSCCE--EEECGGGHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc-cH---H-----------------HHhhhcChhHHhhCCeE--EEEechHHH
Confidence 3455677799999999999999988886 21 1 22344444444445544 666666666
Q ss_pred HHHHHH--hCCcEeccCC
Q 010988 374 SLEAIS--AGVPMITWPL 389 (496)
Q Consensus 374 ~~eal~--~GvP~v~~P~ 389 (496)
++-+++ .|++.+-=|.
T Consensus 120 L~~al~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 120 LLLGIYAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHHHHHHCCCEEECCC
T ss_pred HHHHHHHhcCceEEECCh
Confidence 666665 3665555554
No 496
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=20.96 E-value=2.8e+02 Score=24.57 Aligned_cols=33 Identities=15% Similarity=0.234 Sum_probs=23.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++..+ |-+- ..+|+.|+++|++|+++.-.
T Consensus 23 k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 55 (277)
T 2rhc_B 23 EVALVTGAT-SGIG--LEIARRLGKEGLRVFVCARG 55 (277)
T ss_dssp CEEEEETCS-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 566666443 3232 47899999999999987654
No 497
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=20.92 E-value=95 Score=28.49 Aligned_cols=40 Identities=8% Similarity=0.178 Sum_probs=32.0
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 010988 8 QQPHFVLFPF--LAQGHMIPMIDIGRLLAQNGAAITIVTTPA 47 (496)
Q Consensus 8 ~~~~il~~~~--~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (496)
+.+|+++++. ++-|-..-...||..|+++|.+|.++-.+.
T Consensus 102 ~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 102 TENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp CSCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3456665554 578999999999999999999999986553
No 498
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=20.91 E-value=3e+02 Score=24.12 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=22.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 010988 11 HFVLFPFLAQGHMIPMIDIGRLLAQNGAAITIVTTP 46 (496)
Q Consensus 11 ~il~~~~~~~GHi~p~l~LA~~L~~rGH~Vt~~~~~ 46 (496)
|+++++..+ |-+- ..+|+.|+++|++|+++.-.
T Consensus 8 k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 40 (262)
T 1zem_A 8 KVCLVTGAG-GNIG--LATALRLAEEGTAIALLDMN 40 (262)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-cHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 555666443 3222 47899999999999987654
No 499
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=20.88 E-value=1e+02 Score=27.83 Aligned_cols=39 Identities=15% Similarity=0.247 Sum_probs=29.2
Q ss_pred HHHHHHHHhcCCCCeEEEEcCCCc------chHHHHHhcCCCeEEEe
Q 010988 108 LPLENLLKELAPKPSCIVSDMCYP------WTVDTAARFNIPRISFH 148 (496)
Q Consensus 108 ~~l~~ll~~~~~~pDlVI~D~~~~------~a~~~A~~lgiP~v~~~ 148 (496)
..+.++++. .+||+||+..... -++.+|..+|+|.++..
T Consensus 102 ~~La~~i~~--~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v 146 (264)
T 1o97_C 102 RILTEVIKK--EAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVV 146 (264)
T ss_dssp HHHHHHHHH--HCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHh--cCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccce
Confidence 344455665 4799999875442 67889999999999854
No 500
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.85 E-value=54 Score=27.30 Aligned_cols=34 Identities=9% Similarity=0.027 Sum_probs=25.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 010988 8 QQPHFVLFPFLAQGHMIPMIDIGRLLAQN-GAAITIVTTP 46 (496)
Q Consensus 8 ~~~~il~~~~~~~GHi~p~l~LA~~L~~r-GH~Vt~~~~~ 46 (496)
..+||+++-.+..| ..+|+.|.++ ||+|+++...
T Consensus 38 ~~~~v~IiG~G~~G-----~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 38 GHAQVLILGMGRIG-----TGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TTCSEEEECCSHHH-----HHHHHHHHHHHCSCEEEEESC
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhccCCeEEEEECC
Confidence 35688888544344 4678899999 9999988765
Done!