Query 010990
Match_columns 496
No_of_seqs 134 out of 1145
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 18:30:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010990.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010990hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 1E-187 3E-192 1486.5 41.8 494 1-496 47-541 (555)
2 1o0s_A NAD-ME, NAD-dependent m 100.0 5E-187 2E-191 1488.4 39.8 494 1-496 83-578 (605)
3 1pj3_A NAD-dependent malic enz 100.0 8E-187 3E-191 1483.3 40.9 495 1-496 49-546 (564)
4 3nv9_A Malic enzyme; rossmann 100.0 1E-122 4E-127 970.4 31.5 382 35-488 57-450 (487)
5 2a9f_A Putative malic enzyme ( 100.0 3E-114 1E-118 897.9 16.4 361 26-467 23-390 (398)
6 1vl6_A Malate oxidoreductase; 100.0 1E-108 4E-113 854.5 21.7 354 26-464 27-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 2.2E-87 7.6E-92 706.6 26.2 384 27-492 22-420 (439)
8 3gvp_A Adenosylhomocysteinase 98.9 9.4E-09 3.2E-13 108.4 15.4 168 158-364 112-318 (435)
9 3h9u_A Adenosylhomocysteinase; 98.9 7.8E-09 2.7E-13 109.1 11.5 130 203-366 171-311 (436)
10 1x13_A NAD(P) transhydrogenase 98.4 9.1E-07 3.1E-11 92.0 10.2 218 71-354 26-295 (401)
11 3n58_A Adenosylhomocysteinase; 97.9 5.7E-05 2E-09 80.2 12.1 128 203-364 207-345 (464)
12 3ond_A Adenosylhomocysteinase; 97.9 3.7E-05 1.3E-09 82.3 10.5 131 203-367 225-366 (488)
13 1l7d_A Nicotinamide nucleotide 97.7 0.00055 1.9E-08 70.3 14.4 225 71-353 19-296 (384)
14 4dio_A NAD(P) transhydrogenase 97.2 0.00032 1.1E-08 73.5 5.6 232 72-360 45-322 (405)
15 3r3j_A Glutamate dehydrogenase 96.9 0.043 1.5E-06 58.3 19.0 190 158-366 145-368 (456)
16 4fcc_A Glutamate dehydrogenase 96.9 0.043 1.5E-06 58.2 19.0 182 158-354 141-354 (450)
17 3k92_A NAD-GDH, NAD-specific g 96.7 0.021 7.2E-07 60.2 14.7 178 158-354 126-329 (424)
18 3p2y_A Alanine dehydrogenase/p 96.7 0.0015 5E-08 68.0 5.8 104 234-354 182-305 (381)
19 3aoe_E Glutamate dehydrogenase 96.7 0.012 4E-07 62.0 12.1 186 158-366 123-332 (419)
20 3d4o_A Dipicolinate synthase s 96.6 0.011 3.9E-07 58.1 11.3 132 204-364 117-255 (293)
21 3l07_A Bifunctional protein fo 96.4 0.024 8.3E-07 56.8 11.9 84 215-336 140-224 (285)
22 1a4i_A Methylenetetrahydrofola 96.1 0.011 3.8E-07 59.7 8.1 96 214-353 143-239 (301)
23 2bma_A Glutamate dehydrogenase 96.1 0.095 3.3E-06 55.9 15.2 178 159-354 159-372 (470)
24 3p2o_A Bifunctional protein fo 96.1 0.04 1.4E-06 55.2 11.5 93 215-351 139-232 (285)
25 2yfq_A Padgh, NAD-GDH, NAD-spe 96.0 0.059 2E-06 56.7 13.1 179 158-354 116-326 (421)
26 3aog_A Glutamate dehydrogenase 95.9 0.12 4E-06 54.8 14.9 178 158-354 140-344 (440)
27 3jyo_A Quinate/shikimate dehyd 95.9 0.016 5.3E-07 57.6 7.7 88 220-327 111-205 (283)
28 3ngx_A Bifunctional protein fo 95.6 0.024 8.4E-07 56.6 8.0 82 214-335 130-212 (276)
29 4a5o_A Bifunctional protein fo 95.6 0.027 9.4E-07 56.5 8.2 96 215-354 140-237 (286)
30 3tri_A Pyrroline-5-carboxylate 95.6 0.081 2.8E-06 51.7 11.4 98 236-355 3-102 (280)
31 1v9l_A Glutamate dehydrogenase 95.5 0.08 2.7E-06 55.7 11.8 175 159-354 116-325 (421)
32 1b0a_A Protein (fold bifunctio 95.4 0.027 9.3E-07 56.5 7.4 96 214-353 137-233 (288)
33 4a26_A Putative C-1-tetrahydro 95.3 0.034 1.2E-06 56.1 7.7 96 212-351 141-239 (300)
34 1edz_A 5,10-methylenetetrahydr 95.2 0.039 1.3E-06 56.1 7.9 113 217-353 149-277 (320)
35 3don_A Shikimate dehydrogenase 95.1 0.023 8E-07 56.2 5.8 86 220-327 101-186 (277)
36 1c1d_A L-phenylalanine dehydro 95.0 0.094 3.2E-06 53.9 10.2 172 161-366 93-275 (355)
37 2tmg_A Protein (glutamate dehy 95.0 0.53 1.8E-05 49.4 15.9 178 159-354 115-319 (415)
38 1gpj_A Glutamyl-tRNA reductase 95.0 0.14 4.8E-06 52.8 11.3 102 233-354 164-269 (404)
39 1bgv_A Glutamate dehydrogenase 94.9 0.54 1.9E-05 49.8 15.9 178 160-354 137-350 (449)
40 3oj0_A Glutr, glutamyl-tRNA re 94.9 0.012 4.1E-07 51.3 2.7 70 236-326 21-90 (144)
41 1v8b_A Adenosylhomocysteinase; 94.8 0.12 4.1E-06 55.2 10.6 123 211-366 235-357 (479)
42 2c2x_A Methylenetetrahydrofola 94.7 0.15 5E-06 51.1 10.3 98 214-353 136-234 (281)
43 4e12_A Diketoreductase; oxidor 94.7 0.075 2.6E-06 51.7 8.1 97 237-356 5-124 (283)
44 2egg_A AROE, shikimate 5-dehyd 94.7 0.029 1E-06 55.6 5.2 87 221-327 125-215 (297)
45 2rir_A Dipicolinate synthase, 94.3 0.13 4.3E-06 50.6 8.7 110 227-364 148-257 (300)
46 3u62_A Shikimate dehydrogenase 94.0 0.068 2.3E-06 52.1 6.0 125 167-326 42-176 (253)
47 2v6b_A L-LDH, L-lactate dehydr 94.0 0.025 8.5E-07 56.2 2.9 124 238-378 2-140 (304)
48 3u95_A Glycoside hydrolase, fa 93.8 0.097 3.3E-06 55.6 7.3 107 238-354 2-162 (477)
49 2dpo_A L-gulonate 3-dehydrogen 93.8 0.21 7.1E-06 50.2 9.3 123 236-384 6-151 (319)
50 2ewd_A Lactate dehydrogenase,; 93.6 0.14 4.8E-06 50.8 7.5 97 237-354 5-124 (317)
51 3fbt_A Chorismate mutase and s 93.5 0.1 3.5E-06 51.8 6.5 49 221-280 107-155 (282)
52 1leh_A Leucine dehydrogenase; 93.5 0.14 4.7E-06 52.7 7.6 159 164-354 93-264 (364)
53 1pzg_A LDH, lactate dehydrogen 93.5 0.11 3.9E-06 52.2 6.8 105 237-355 10-136 (331)
54 2o4c_A Erythronate-4-phosphate 93.5 0.65 2.2E-05 48.1 12.6 196 203-445 80-292 (380)
55 3tnl_A Shikimate dehydrogenase 93.4 0.12 4.2E-06 52.1 6.9 50 220-280 138-187 (315)
56 3o8q_A Shikimate 5-dehydrogena 93.4 0.11 3.8E-06 51.4 6.4 97 167-280 50-159 (281)
57 3t4e_A Quinate/shikimate dehyd 93.3 0.12 4.2E-06 52.0 6.7 49 221-280 133-181 (312)
58 3mw9_A GDH 1, glutamate dehydr 93.3 0.6 2E-05 50.2 12.3 179 158-354 136-352 (501)
59 1mld_A Malate dehydrogenase; o 93.3 0.28 9.7E-06 48.9 9.3 101 238-354 2-120 (314)
60 3d64_A Adenosylhomocysteinase; 93.3 0.26 8.9E-06 52.8 9.5 99 228-354 269-367 (494)
61 2hk9_A Shikimate dehydrogenase 93.2 0.2 6.8E-06 48.7 7.8 84 221-327 114-197 (275)
62 3dtt_A NADP oxidoreductase; st 93.1 0.23 7.9E-06 47.2 8.0 109 230-354 13-127 (245)
63 3pwz_A Shikimate dehydrogenase 93.1 0.12 4E-06 51.0 6.1 99 167-280 44-153 (272)
64 1zud_1 Adenylyltransferase THI 92.9 0.1 3.6E-06 50.4 5.4 37 233-280 25-61 (251)
65 1hyh_A L-hicdh, L-2-hydroxyiso 92.8 0.13 4.6E-06 50.7 6.0 101 237-354 2-125 (309)
66 2ekl_A D-3-phosphoglycerate de 92.8 0.95 3.2E-05 45.1 12.3 122 203-353 90-234 (313)
67 3tum_A Shikimate dehydrogenase 92.8 0.18 6.1E-06 49.7 6.9 48 221-279 110-157 (269)
68 3ce6_A Adenosylhomocysteinase; 92.3 1 3.5E-05 48.2 12.4 107 228-365 266-373 (494)
69 1ldn_A L-lactate dehydrogenase 92.2 0.2 6.8E-06 50.0 6.4 105 237-354 7-126 (316)
70 1pjc_A Protein (L-alanine dehy 92.1 0.19 6.5E-06 50.9 6.3 96 234-353 165-269 (361)
71 2g1u_A Hypothetical protein TM 91.9 0.26 8.9E-06 43.2 6.2 37 232-280 15-51 (155)
72 2hjr_A Malate dehydrogenase; m 91.9 0.12 4.2E-06 51.9 4.5 128 237-381 15-160 (328)
73 2d5c_A AROE, shikimate 5-dehyd 91.9 0.25 8.7E-06 47.3 6.6 81 221-327 102-182 (263)
74 2i6t_A Ubiquitin-conjugating e 91.9 0.32 1.1E-05 48.5 7.5 120 237-377 15-150 (303)
75 1b8p_A Protein (malate dehydro 91.9 0.21 7E-06 50.1 6.1 111 237-354 6-136 (329)
76 3rui_A Ubiquitin-like modifier 91.8 0.14 4.8E-06 52.4 4.9 37 233-280 31-67 (340)
77 3hdj_A Probable ornithine cycl 91.8 0.61 2.1E-05 46.7 9.5 113 221-364 108-227 (313)
78 1t2d_A LDH-P, L-lactate dehydr 91.8 0.24 8.2E-06 49.7 6.5 100 237-355 5-130 (322)
79 3oet_A Erythronate-4-phosphate 91.8 0.92 3.1E-05 47.0 11.0 120 203-354 83-213 (381)
80 1a5z_A L-lactate dehydrogenase 91.7 0.32 1.1E-05 48.4 7.2 98 238-355 2-120 (319)
81 3h5n_A MCCB protein; ubiquitin 91.5 0.53 1.8E-05 47.9 8.8 38 232-280 114-151 (353)
82 2eez_A Alanine dehydrogenase; 91.5 0.22 7.5E-06 50.5 6.0 96 234-353 164-268 (369)
83 1gtm_A Glutamate dehydrogenase 91.4 1.2 4.3E-05 46.5 11.7 113 159-284 115-250 (419)
84 2gcg_A Glyoxylate reductase/hy 91.2 1.5 5.2E-05 43.8 11.7 140 184-352 80-247 (330)
85 2dbq_A Glyoxylate reductase; D 91.2 2.4 8.3E-05 42.5 13.1 121 203-352 89-241 (334)
86 3d1l_A Putative NADP oxidoredu 91.2 0.19 6.4E-06 47.9 4.7 99 232-354 6-105 (266)
87 1nyt_A Shikimate 5-dehydrogena 91.1 0.36 1.2E-05 46.7 6.8 49 220-280 103-151 (271)
88 1s6y_A 6-phospho-beta-glucosid 91.0 0.1 3.5E-06 55.1 3.0 127 237-377 8-175 (450)
89 2zqz_A L-LDH, L-lactate dehydr 91.0 0.19 6.6E-06 50.6 4.8 116 236-367 9-138 (326)
90 1o6z_A MDH, malate dehydrogena 91.0 0.15 5.3E-06 50.5 4.1 113 238-367 2-132 (303)
91 3fef_A Putative glucosidase LP 91.0 0.61 2.1E-05 49.3 8.9 106 234-354 3-149 (450)
92 3d0o_A L-LDH 1, L-lactate dehy 90.7 0.33 1.1E-05 48.5 6.2 117 235-367 5-136 (317)
93 1x7d_A Ornithine cyclodeaminas 90.6 0.38 1.3E-05 49.0 6.6 115 221-363 116-239 (350)
94 1ez4_A Lactate dehydrogenase; 90.6 0.23 8E-06 49.7 5.0 115 237-367 6-134 (318)
95 1guz_A Malate dehydrogenase; o 90.6 0.56 1.9E-05 46.5 7.7 100 238-354 2-121 (310)
96 1y6j_A L-lactate dehydrogenase 90.5 0.31 1.1E-05 48.8 5.8 121 237-378 8-149 (318)
97 1p77_A Shikimate 5-dehydrogena 90.5 0.29 1E-05 47.5 5.5 49 220-280 103-151 (272)
98 1u8x_X Maltose-6'-phosphate gl 90.3 0.16 5.3E-06 54.1 3.7 126 236-377 28-194 (472)
99 3kkj_A Amine oxidase, flavin-c 90.2 0.26 8.9E-06 42.9 4.4 31 238-280 4-34 (336)
100 4gsl_A Ubiquitin-like modifier 90.2 0.25 8.7E-06 54.3 5.2 37 233-280 323-359 (615)
101 1obb_A Maltase, alpha-glucosid 90.0 0.22 7.6E-06 53.1 4.5 124 236-377 3-174 (480)
102 4g2n_A D-isomer specific 2-hyd 90.0 2 6.8E-05 43.7 11.4 192 203-433 116-336 (345)
103 3h8v_A Ubiquitin-like modifier 89.9 0.34 1.2E-05 48.5 5.5 38 232-280 32-69 (292)
104 1lu9_A Methylene tetrahydromet 89.9 1.4 4.8E-05 42.7 9.8 81 186-280 64-152 (287)
105 2rcy_A Pyrroline carboxylate r 89.9 1.6 5.4E-05 41.1 10.0 92 236-355 4-95 (262)
106 1txg_A Glycerol-3-phosphate de 89.9 0.46 1.6E-05 46.3 6.4 100 238-354 2-107 (335)
107 2cuk_A Glycerate dehydrogenase 89.8 3.4 0.00012 41.1 12.8 118 203-354 87-232 (311)
108 1xdw_A NAD+-dependent (R)-2-hy 89.8 2.1 7.2E-05 43.0 11.3 138 184-353 73-236 (331)
109 1wwk_A Phosphoglycerate dehydr 89.7 1.8 6.1E-05 43.0 10.6 120 204-353 89-234 (307)
110 2i99_A MU-crystallin homolog; 89.6 0.92 3.1E-05 44.9 8.4 113 221-361 122-237 (312)
111 3vku_A L-LDH, L-lactate dehydr 89.6 0.33 1.1E-05 49.2 5.2 116 236-367 9-138 (326)
112 1smk_A Malate dehydrogenase, g 89.6 0.48 1.6E-05 47.5 6.3 104 237-354 9-128 (326)
113 2zyd_A 6-phosphogluconate dehy 89.5 0.72 2.5E-05 48.8 8.0 102 233-354 12-116 (480)
114 2hmt_A YUAA protein; RCK, KTN, 89.5 0.29 9.8E-06 41.1 4.0 35 234-280 4-38 (144)
115 1up7_A 6-phospho-beta-glucosid 89.3 0.35 1.2E-05 50.5 5.3 124 237-377 3-164 (417)
116 1lld_A L-lactate dehydrogenase 89.2 0.28 9.6E-06 48.0 4.3 102 236-354 7-127 (319)
117 3vh1_A Ubiquitin-like modifier 89.0 0.31 1.1E-05 53.4 4.9 38 232-280 323-360 (598)
118 1omo_A Alanine dehydrogenase; 89.0 1.1 3.9E-05 44.6 8.6 113 221-363 112-230 (322)
119 3jtm_A Formate dehydrogenase, 89.0 2.4 8.2E-05 43.2 11.1 195 202-433 107-330 (351)
120 3ba1_A HPPR, hydroxyphenylpyru 89.0 2.2 7.5E-05 43.1 10.7 120 203-354 109-254 (333)
121 3k5p_A D-3-phosphoglycerate de 89.0 22 0.00076 37.1 18.6 195 202-435 101-324 (416)
122 1ur5_A Malate dehydrogenase; o 88.7 0.56 1.9E-05 46.6 6.1 104 237-354 3-122 (309)
123 2vhw_A Alanine dehydrogenase; 88.5 0.39 1.3E-05 49.0 4.9 95 233-351 165-268 (377)
124 1oju_A MDH, malate dehydrogena 88.4 0.44 1.5E-05 47.4 5.1 114 238-367 2-131 (294)
125 4hy3_A Phosphoglycerate oxidor 88.4 1.5 5E-05 45.1 9.1 190 203-433 119-339 (365)
126 4huj_A Uncharacterized protein 88.2 0.47 1.6E-05 44.3 4.9 93 237-355 24-117 (220)
127 1jw9_B Molybdopterin biosynthe 88.2 0.35 1.2E-05 46.6 4.0 38 233-281 28-65 (249)
128 3i83_A 2-dehydropantoate 2-red 88.2 0.72 2.5E-05 45.4 6.4 98 237-355 3-109 (320)
129 1z82_A Glycerol-3-phosphate de 88.1 0.53 1.8E-05 46.6 5.4 95 236-356 14-116 (335)
130 4dgs_A Dehydrogenase; structur 88.0 2.6 9E-05 42.8 10.6 188 203-433 115-331 (340)
131 2j6i_A Formate dehydrogenase; 87.9 2 7E-05 43.8 9.8 146 183-354 87-260 (364)
132 2xxj_A L-LDH, L-lactate dehydr 87.9 0.25 8.7E-06 49.3 3.0 114 237-367 1-129 (310)
133 3ado_A Lambda-crystallin; L-gu 87.9 0.74 2.5E-05 46.5 6.4 33 236-280 6-38 (319)
134 1nvt_A Shikimate 5'-dehydrogen 87.8 0.53 1.8E-05 45.9 5.2 117 118-280 33-159 (287)
135 3gvi_A Malate dehydrogenase; N 87.7 0.72 2.5E-05 46.5 6.2 106 234-354 5-127 (324)
136 1qp8_A Formate dehydrogenase; 87.7 5.3 0.00018 39.6 12.4 117 203-352 71-211 (303)
137 3k96_A Glycerol-3-phosphate de 87.7 1.4 4.9E-05 44.6 8.4 102 236-355 29-137 (356)
138 2d4a_B Malate dehydrogenase; a 87.6 0.54 1.8E-05 46.8 5.1 96 238-354 1-119 (308)
139 1npy_A Hypothetical shikimate 87.6 0.75 2.6E-05 45.1 6.1 48 221-280 105-152 (271)
140 1sc6_A PGDH, D-3-phosphoglycer 87.5 6.3 0.00022 40.8 13.3 192 202-433 90-311 (404)
141 1j4a_A D-LDH, D-lactate dehydr 87.3 6.1 0.00021 39.6 12.7 123 202-354 91-238 (333)
142 4e21_A 6-phosphogluconate dehy 87.2 1.9 6.7E-05 43.8 9.1 96 234-354 20-118 (358)
143 3p7m_A Malate dehydrogenase; p 87.2 0.39 1.3E-05 48.4 3.9 106 235-354 4-125 (321)
144 2yq5_A D-isomer specific 2-hyd 87.0 6.7 0.00023 39.8 12.9 121 203-354 92-239 (343)
145 3gvx_A Glycerate dehydrogenase 87.0 3.4 0.00012 41.0 10.5 175 215-433 85-281 (290)
146 3nep_X Malate dehydrogenase; h 86.8 0.47 1.6E-05 47.7 4.2 113 238-366 2-130 (314)
147 2raf_A Putative dinucleotide-b 86.8 1.6 5.3E-05 40.5 7.5 80 232-355 15-94 (209)
148 4fgw_A Glycerol-3-phosphate de 86.8 0.67 2.3E-05 48.2 5.5 95 238-342 36-141 (391)
149 3tl2_A Malate dehydrogenase; c 86.5 0.51 1.7E-05 47.4 4.3 116 234-366 6-139 (315)
150 3gt0_A Pyrroline-5-carboxylate 86.5 1.3 4.4E-05 41.8 6.9 98 237-355 3-101 (247)
151 2p4q_A 6-phosphogluconate dehy 86.3 1.2 4E-05 47.5 7.2 98 237-354 11-112 (497)
152 2d0i_A Dehydrogenase; structur 86.2 4.1 0.00014 40.9 10.8 91 232-352 142-236 (333)
153 3evt_A Phosphoglycerate dehydr 86.0 2.1 7.2E-05 43.1 8.5 189 203-433 83-301 (324)
154 1ks9_A KPA reductase;, 2-dehyd 86.0 1.2 4E-05 42.2 6.4 95 238-354 2-100 (291)
155 1hye_A L-lactate/malate dehydr 86.0 1.1 3.7E-05 44.5 6.3 113 238-367 2-135 (313)
156 3k6j_A Protein F01G10.3, confi 86.0 1 3.4E-05 47.8 6.4 32 237-280 55-86 (460)
157 3abi_A Putative uncharacterize 85.8 0.42 1.4E-05 48.1 3.3 89 237-352 17-109 (365)
158 3pqe_A L-LDH, L-lactate dehydr 85.5 0.47 1.6E-05 47.9 3.5 116 236-367 5-135 (326)
159 1dxy_A D-2-hydroxyisocaproate 85.4 8.8 0.0003 38.5 12.8 121 203-354 90-236 (333)
160 4ina_A Saccharopine dehydrogen 85.1 0.93 3.2E-05 46.6 5.6 96 237-352 2-108 (405)
161 1y8q_A Ubiquitin-like 1 activa 85.0 0.69 2.4E-05 46.9 4.4 37 233-280 33-69 (346)
162 3hg7_A D-isomer specific 2-hyd 84.7 1.8 6.2E-05 43.6 7.4 188 204-435 89-304 (324)
163 1hyu_A AHPF, alkyl hydroperoxi 84.7 0.86 2.9E-05 48.1 5.2 99 167-280 135-244 (521)
164 1x0v_A GPD-C, GPDH-C, glycerol 84.6 1.8 6.2E-05 42.6 7.2 109 236-355 8-128 (354)
165 2w2k_A D-mandelate dehydrogena 84.5 5.7 0.0002 40.0 11.0 168 231-433 158-329 (348)
166 2pi1_A D-lactate dehydrogenase 84.5 5.8 0.0002 40.0 11.0 139 203-373 86-250 (334)
167 3pp8_A Glyoxylate/hydroxypyruv 84.4 1.4 4.8E-05 44.2 6.3 191 203-434 86-302 (315)
168 3b1f_A Putative prephenate deh 84.2 2.4 8.1E-05 40.6 7.7 97 236-354 6-104 (290)
169 2izz_A Pyrroline-5-carboxylate 83.9 1.7 5.8E-05 42.9 6.7 100 235-355 21-122 (322)
170 2ew2_A 2-dehydropantoate 2-red 83.9 0.65 2.2E-05 44.5 3.5 98 237-355 4-112 (316)
171 2nac_A NAD-dependent formate d 83.7 4.3 0.00015 42.0 9.8 193 202-433 134-357 (393)
172 3qsg_A NAD-binding phosphogluc 83.5 5.5 0.00019 39.1 10.1 34 236-280 24-57 (312)
173 1pgj_A 6PGDH, 6-PGDH, 6-phosph 83.5 1.3 4.5E-05 46.7 5.9 97 238-354 3-106 (478)
174 1hdo_A Biliverdin IX beta redu 83.4 3.4 0.00012 36.4 7.8 95 237-349 4-109 (206)
175 1gdh_A D-glycerate dehydrogena 83.4 5.1 0.00017 40.0 9.9 122 203-352 89-239 (320)
176 2x0j_A Malate dehydrogenase; o 83.4 1.4 4.7E-05 44.0 5.8 114 238-367 2-131 (294)
177 3c24_A Putative oxidoreductase 83.2 2 6.9E-05 41.3 6.7 91 237-354 12-104 (286)
178 2g76_A 3-PGDH, D-3-phosphoglyc 83.1 5.2 0.00018 40.4 9.9 122 203-354 111-258 (335)
179 2qrj_A Saccharopine dehydrogen 83.1 2.7 9.1E-05 43.8 7.9 71 236-338 214-289 (394)
180 1yj8_A Glycerol-3-phosphate de 83.0 1.3 4.4E-05 44.6 5.4 108 237-355 22-145 (375)
181 3fi9_A Malate dehydrogenase; s 82.7 1.8 6.2E-05 44.0 6.4 117 234-367 6-139 (343)
182 1y7t_A Malate dehydrogenase; N 82.7 0.82 2.8E-05 45.3 3.8 110 237-354 5-133 (327)
183 3lk7_A UDP-N-acetylmuramoylala 82.6 1.3 4.4E-05 46.1 5.3 112 233-378 6-120 (451)
184 4dll_A 2-hydroxy-3-oxopropiona 82.5 1 3.5E-05 44.5 4.4 35 234-280 29-63 (320)
185 3pef_A 6-phosphogluconate dehy 82.5 1.4 4.9E-05 42.4 5.3 90 237-352 2-96 (287)
186 3vrd_B FCCB subunit, flavocyto 82.4 1.5 5E-05 43.7 5.6 35 236-280 2-36 (401)
187 1jay_A Coenzyme F420H2:NADP+ o 82.4 0.54 1.8E-05 42.9 2.1 95 238-355 2-101 (212)
188 2iz1_A 6-phosphogluconate dehy 82.3 2.8 9.7E-05 43.9 7.9 99 236-354 5-106 (474)
189 2h78_A Hibadh, 3-hydroxyisobut 82.0 1.1 3.8E-05 43.4 4.3 32 237-280 4-35 (302)
190 2vns_A Metalloreductase steap3 81.9 1.2 3.9E-05 41.5 4.2 92 235-354 27-118 (215)
191 2uyy_A N-PAC protein; long-cha 81.6 1.7 5.9E-05 42.2 5.6 91 237-353 31-126 (316)
192 3l6d_A Putative oxidoreductase 81.6 1.7 5.7E-05 42.7 5.5 36 233-280 6-41 (306)
193 3ggo_A Prephenate dehydrogenas 81.5 4 0.00014 40.5 8.3 90 236-351 33-128 (314)
194 1bg6_A N-(1-D-carboxylethyl)-L 81.3 3.8 0.00013 40.1 8.0 93 237-352 5-110 (359)
195 1y8q_B Anthracycline-, ubiquit 81.3 1.5 5E-05 48.5 5.4 37 233-280 14-50 (640)
196 1id1_A Putative potassium chan 81.3 1.2 4E-05 38.8 3.8 34 235-280 2-35 (153)
197 4gwg_A 6-phosphogluconate dehy 80.9 3.1 0.00011 44.3 7.6 99 236-354 4-106 (484)
198 3c85_A Putative glutathione-re 80.9 2 6.8E-05 38.2 5.3 36 234-280 37-72 (183)
199 3gg9_A D-3-phosphoglycerate de 80.9 6.1 0.00021 40.2 9.5 188 203-433 97-325 (352)
200 3ip1_A Alcohol dehydrogenase, 80.5 6.6 0.00022 39.7 9.7 81 223-326 200-292 (404)
201 1mx3_A CTBP1, C-terminal bindi 80.4 24 0.00082 35.7 13.7 210 183-433 88-334 (347)
202 3phh_A Shikimate dehydrogenase 80.4 1.4 4.7E-05 43.5 4.4 98 221-351 107-209 (269)
203 3doj_A AT3G25530, dehydrogenas 80.4 1.4 4.8E-05 43.2 4.5 36 233-280 18-53 (310)
204 4e5n_A Thermostable phosphite 80.3 5.3 0.00018 40.1 8.8 195 203-433 89-317 (330)
205 4hb9_A Similarities with proba 80.3 1.5 5.1E-05 42.9 4.6 32 237-280 2-33 (412)
206 4aj2_A L-lactate dehydrogenase 80.0 0.91 3.1E-05 46.0 3.0 119 233-368 16-150 (331)
207 3pdu_A 3-hydroxyisobutyrate de 79.8 2 6.9E-05 41.3 5.3 32 237-280 2-33 (287)
208 2g5c_A Prephenate dehydrogenas 79.4 4.4 0.00015 38.5 7.6 97 237-354 2-99 (281)
209 1tt5_B Ubiquitin-activating en 79.4 1.2 4.2E-05 46.7 3.9 38 232-280 36-73 (434)
210 3ldh_A Lactate dehydrogenase; 79.2 0.9 3.1E-05 46.1 2.7 124 236-377 21-163 (330)
211 3cky_A 2-hydroxymethyl glutara 79.1 1.6 5.3E-05 42.0 4.3 32 237-280 5-36 (301)
212 3e8x_A Putative NAD-dependent 78.9 3.9 0.00013 37.5 6.8 97 232-351 17-131 (236)
213 3d1c_A Flavin-containing putat 78.7 1.9 6.5E-05 41.9 4.8 35 236-281 4-38 (369)
214 4b4u_A Bifunctional protein fo 78.4 5.1 0.00017 40.4 7.9 84 215-336 158-242 (303)
215 1yb4_A Tartronic semialdehyde 78.4 2.8 9.7E-05 40.0 5.8 30 237-278 4-33 (295)
216 2pgd_A 6-phosphogluconate dehy 78.1 4.2 0.00014 42.7 7.5 98 237-354 3-104 (482)
217 4egb_A DTDP-glucose 4,6-dehydr 77.6 5.6 0.00019 38.4 7.8 106 234-351 22-149 (346)
218 3gpi_A NAD-dependent epimerase 77.3 1.9 6.5E-05 40.7 4.2 95 236-351 3-109 (286)
219 4a9w_A Monooxygenase; baeyer-v 77.1 1.9 6.6E-05 41.1 4.2 34 236-281 3-36 (357)
220 4ezb_A Uncharacterized conserv 76.8 2.8 9.5E-05 41.5 5.4 33 237-280 25-57 (317)
221 3qha_A Putative oxidoreductase 76.6 3.3 0.00011 40.3 5.8 33 236-280 15-47 (296)
222 2f1k_A Prephenate dehydrogenas 76.4 5.2 0.00018 37.9 7.1 90 238-352 2-92 (279)
223 3fbs_A Oxidoreductase; structu 76.0 2.4 8.1E-05 39.5 4.5 32 237-280 3-34 (297)
224 3fwz_A Inner membrane protein 75.2 1.3 4.5E-05 38.1 2.3 32 237-280 8-39 (140)
225 3alj_A 2-methyl-3-hydroxypyrid 75.2 2.7 9.1E-05 41.6 4.8 38 233-282 8-45 (379)
226 3fg2_P Putative rubredoxin red 75.2 2.6 8.9E-05 42.4 4.8 37 237-283 2-38 (404)
227 1vpd_A Tartronate semialdehyde 75.1 2 6.8E-05 41.2 3.8 32 237-280 6-37 (299)
228 3oz2_A Digeranylgeranylglycero 75.1 2.5 8.4E-05 40.9 4.4 31 238-280 6-36 (397)
229 3f8d_A Thioredoxin reductase ( 74.9 2.6 9.1E-05 39.6 4.5 33 236-280 15-47 (323)
230 3lzw_A Ferredoxin--NADP reduct 74.9 2.8 9.4E-05 39.8 4.6 33 236-280 7-39 (332)
231 2zbw_A Thioredoxin reductase; 74.7 2.6 8.7E-05 40.4 4.4 34 236-281 5-38 (335)
232 2nvu_B Maltose binding protein 74.5 2.1 7.2E-05 47.7 4.2 36 234-280 409-444 (805)
233 1i36_A Conserved hypothetical 74.2 5.4 0.00018 37.5 6.5 30 238-279 2-31 (264)
234 2z2v_A Hypothetical protein PH 74.0 1.6 5.4E-05 44.4 2.9 119 236-383 16-137 (365)
235 2x5o_A UDP-N-acetylmuramoylala 73.3 8.5 0.00029 39.6 8.2 107 234-378 3-112 (439)
236 3itj_A Thioredoxin reductase 1 72.9 2.5 8.5E-05 40.2 3.8 33 236-280 22-54 (338)
237 2ph5_A Homospermidine synthase 72.8 8.6 0.00029 41.1 8.2 99 236-352 13-115 (480)
238 3r6d_A NAD-dependent epimerase 72.4 4.6 0.00016 36.5 5.3 94 237-349 6-106 (221)
239 2yjz_A Metalloreductase steap4 74.8 0.76 2.6E-05 42.8 0.0 92 234-354 17-108 (201)
240 3kb6_A D-lactate dehydrogenase 72.2 29 0.00099 34.8 11.6 120 204-353 87-232 (334)
241 3hyw_A Sulfide-quinone reducta 72.1 2.7 9.1E-05 42.9 4.0 34 237-280 3-36 (430)
242 2q7v_A Thioredoxin reductase; 72.0 3.1 0.0001 39.9 4.2 33 236-280 8-40 (325)
243 3lxd_A FAD-dependent pyridine 71.8 3.4 0.00012 41.6 4.7 38 235-282 8-45 (415)
244 5mdh_A Malate dehydrogenase; o 71.8 1.7 5.8E-05 43.9 2.5 121 237-367 4-142 (333)
245 3i6i_A Putative leucoanthocyan 71.8 3.5 0.00012 40.1 4.7 96 233-348 7-117 (346)
246 3dme_A Conserved exported prot 71.7 3.7 0.00013 39.4 4.8 33 236-280 4-36 (369)
247 2jae_A L-amino acid oxidase; o 71.5 3.3 0.00011 42.4 4.5 42 229-282 4-45 (489)
248 4id9_A Short-chain dehydrogena 71.1 11 0.00036 36.4 7.9 97 232-351 15-126 (347)
249 2pv7_A T-protein [includes: ch 71.0 11 0.00036 36.7 7.9 32 237-280 22-54 (298)
250 3cgv_A Geranylgeranyl reductas 71.0 3.3 0.00011 40.5 4.2 35 236-282 4-38 (397)
251 1tt5_A APPBP1, amyloid protein 71.0 2.1 7.1E-05 46.1 3.0 102 232-349 28-155 (531)
252 3hhp_A Malate dehydrogenase; M 71.0 5.4 0.00019 39.9 5.9 103 238-354 2-121 (312)
253 2vou_A 2,6-dihydroxypyridine h 71.0 4.2 0.00014 40.5 5.1 35 235-281 4-38 (397)
254 2ywl_A Thioredoxin reductase r 70.9 4.1 0.00014 35.7 4.5 32 237-280 2-33 (180)
255 1yvv_A Amine oxidase, flavin-c 70.9 3.7 0.00013 39.2 4.5 33 237-281 3-35 (336)
256 3ab1_A Ferredoxin--NADP reduct 70.8 4 0.00014 39.8 4.8 34 236-281 14-47 (360)
257 3rp8_A Flavoprotein monooxygen 70.7 3.7 0.00013 40.9 4.7 36 234-281 21-56 (407)
258 3ic5_A Putative saccharopine d 70.7 4.2 0.00014 32.6 4.2 83 236-340 5-91 (118)
259 3c96_A Flavin-containing monoo 70.7 3.9 0.00013 40.9 4.8 35 236-281 4-38 (410)
260 1lss_A TRK system potassium up 70.6 4.6 0.00016 33.4 4.5 33 236-280 4-36 (140)
261 3nix_A Flavoprotein/dehydrogen 70.6 5.2 0.00018 39.7 5.7 35 236-282 5-39 (421)
262 3llv_A Exopolyphosphatase-rela 70.6 4 0.00014 34.5 4.2 34 235-280 5-38 (141)
263 2q1w_A Putative nucleotide sug 70.6 12 0.0004 36.2 8.1 103 234-351 19-137 (333)
264 3h8l_A NADH oxidase; membrane 70.5 3.4 0.00011 41.4 4.3 36 237-281 2-37 (409)
265 1ryi_A Glycine oxidase; flavop 70.5 3.8 0.00013 40.0 4.6 35 236-282 17-51 (382)
266 2xdo_A TETX2 protein; tetracyc 70.5 3.5 0.00012 41.1 4.4 36 234-281 24-59 (398)
267 3grf_A Ornithine carbamoyltran 70.4 15 0.0005 37.3 8.9 136 168-322 91-240 (328)
268 2x3n_A Probable FAD-dependent 70.3 3.7 0.00013 40.7 4.5 35 236-282 6-40 (399)
269 3s2u_A UDP-N-acetylglucosamine 70.2 5.7 0.0002 39.5 5.9 40 309-352 85-124 (365)
270 2pzm_A Putative nucleotide sug 70.2 8.7 0.0003 37.1 7.0 103 232-351 16-136 (330)
271 3r9u_A Thioredoxin reductase; 70.1 4.1 0.00014 38.2 4.6 33 236-280 4-37 (315)
272 3cty_A Thioredoxin reductase; 70.0 3.9 0.00013 39.0 4.4 33 236-280 16-48 (319)
273 3axb_A Putative oxidoreductase 69.8 3.7 0.00013 41.4 4.5 37 232-279 19-55 (448)
274 1y56_B Sarcosine oxidase; dehy 69.8 3.9 0.00013 40.0 4.5 34 236-281 5-38 (382)
275 3klj_A NAD(FAD)-dependent dehy 69.6 4.4 0.00015 41.0 4.9 37 235-283 8-44 (385)
276 3pdi_B Nitrogenase MOFE cofact 69.5 2.7 9.3E-05 44.2 3.5 75 232-325 309-384 (458)
277 2gag_B Heterotetrameric sarcos 69.5 4.8 0.00016 39.5 5.1 35 236-281 21-56 (405)
278 2q0l_A TRXR, thioredoxin reduc 69.5 4.6 0.00016 38.2 4.8 33 237-280 2-34 (311)
279 3dhn_A NAD-dependent epimerase 69.4 5.9 0.0002 35.7 5.3 94 237-349 5-110 (227)
280 4ej6_A Putative zinc-binding d 69.1 13 0.00045 37.1 8.3 91 211-325 159-262 (370)
281 2gf3_A MSOX, monomeric sarcosi 68.6 4.6 0.00016 39.4 4.7 35 237-283 4-38 (389)
282 1k0i_A P-hydroxybenzoate hydro 68.4 4.9 0.00017 39.7 4.9 33 237-281 3-35 (394)
283 2vdc_G Glutamate synthase [NAD 68.4 4.9 0.00017 41.8 5.1 34 235-280 121-154 (456)
284 2z1m_A GDP-D-mannose dehydrata 68.3 9.6 0.00033 36.3 6.8 101 235-351 2-127 (345)
285 3ef6_A Toluene 1,2-dioxygenase 68.2 4.7 0.00016 40.7 4.8 37 237-283 3-39 (410)
286 2cvz_A Dehydrogenase, 3-hydrox 67.6 4.1 0.00014 38.6 4.0 30 238-280 3-32 (289)
287 2uzz_A N-methyl-L-tryptophan o 67.6 4.6 0.00016 39.3 4.5 35 237-283 3-37 (372)
288 2dq4_A L-threonine 3-dehydroge 67.6 5.9 0.0002 39.0 5.3 92 213-325 143-240 (343)
289 3slg_A PBGP3 protein; structur 67.4 20 0.00068 34.9 9.1 101 233-351 21-141 (372)
290 3dje_A Fructosyl amine: oxygen 67.3 4.7 0.00016 40.5 4.6 37 236-283 6-42 (438)
291 4eqs_A Coenzyme A disulfide re 67.2 4.6 0.00016 41.4 4.6 34 238-281 2-35 (437)
292 3k7m_X 6-hydroxy-L-nicotine ox 67.2 5.1 0.00018 39.9 4.8 32 238-281 3-34 (431)
293 2nu8_A Succinyl-COA ligase [AD 67.1 6.7 0.00023 38.5 5.5 86 236-347 7-93 (288)
294 1vdc_A NTR, NADPH dependent th 67.1 3.7 0.00013 39.2 3.6 33 235-279 7-39 (333)
295 1pqw_A Polyketide synthase; ro 66.9 13 0.00045 33.1 7.1 50 219-280 22-72 (198)
296 1trb_A Thioredoxin reductase; 66.7 3.6 0.00012 39.0 3.4 34 235-280 4-37 (320)
297 3m2p_A UDP-N-acetylglucosamine 66.7 15 0.0005 35.0 7.8 93 237-351 3-109 (311)
298 3uox_A Otemo; baeyer-villiger 66.5 5.2 0.00018 42.6 4.9 35 235-281 8-42 (545)
299 2oln_A NIKD protein; flavoprot 66.4 4.9 0.00017 39.7 4.4 36 236-283 4-39 (397)
300 3ehe_A UDP-glucose 4-epimerase 66.4 19 0.00064 34.2 8.4 94 238-351 3-114 (313)
301 2xve_A Flavin-containing monoo 66.3 4.9 0.00017 41.5 4.6 38 237-280 3-40 (464)
302 2gqw_A Ferredoxin reductase; f 66.3 6.2 0.00021 39.8 5.3 38 236-283 7-44 (408)
303 3cmm_A Ubiquitin-activating en 66.3 4.6 0.00016 46.8 4.8 38 232-280 23-60 (1015)
304 4gbj_A 6-phosphogluconate dehy 66.2 9.7 0.00033 37.3 6.5 90 237-353 6-99 (297)
305 1c0p_A D-amino acid oxidase; a 66.2 5.9 0.0002 38.7 4.9 34 236-281 6-39 (363)
306 2ahr_A Putative pyrroline carb 66.1 4 0.00014 38.3 3.6 90 237-354 4-93 (259)
307 1zk7_A HGII, reductase, mercur 65.8 5.4 0.00018 40.9 4.7 33 236-280 4-36 (467)
308 1ygy_A PGDH, D-3-phosphoglycer 65.6 17 0.00059 38.6 8.8 120 203-352 88-233 (529)
309 4ep1_A Otcase, ornithine carba 65.3 33 0.0011 35.0 10.3 131 174-326 121-257 (340)
310 3d6n_B Aspartate carbamoyltran 65.3 80 0.0027 31.4 13.0 127 174-326 85-215 (291)
311 3pid_A UDP-glucose 6-dehydroge 65.2 23 0.00077 37.1 9.4 40 228-280 28-67 (432)
312 2d8a_A PH0655, probable L-thre 65.1 5.8 0.0002 39.1 4.6 49 219-280 153-201 (348)
313 3i3l_A Alkylhalidase CMLS; fla 64.7 8.3 0.00028 41.6 6.1 37 234-282 21-57 (591)
314 3s5w_A L-ornithine 5-monooxyge 64.4 4.5 0.00015 41.0 3.8 39 236-282 30-69 (463)
315 3tpf_A Otcase, ornithine carba 64.3 45 0.0016 33.4 11.0 134 168-324 82-222 (307)
316 4ap3_A Steroid monooxygenase; 64.0 5.7 0.0002 42.3 4.7 35 235-281 20-54 (549)
317 2gv8_A Monooxygenase; FMO, FAD 63.9 5.4 0.00019 40.6 4.3 36 235-280 5-40 (447)
318 1dxl_A Dihydrolipoamide dehydr 63.8 6.7 0.00023 40.1 5.0 33 236-280 6-38 (470)
319 3h28_A Sulfide-quinone reducta 63.6 6.2 0.00021 39.9 4.7 35 237-281 3-37 (430)
320 4g6h_A Rotenone-insensitive NA 63.4 3.4 0.00012 43.5 2.8 32 237-280 43-74 (502)
321 1f0y_A HCDH, L-3-hydroxyacyl-C 63.3 6.7 0.00023 38.0 4.7 32 237-280 16-47 (302)
322 3iwa_A FAD-dependent pyridine 63.3 4.8 0.00016 41.3 3.8 38 236-283 3-40 (472)
323 2r9z_A Glutathione amide reduc 63.3 6.2 0.00021 40.7 4.6 33 236-280 4-36 (463)
324 3sx6_A Sulfide-quinone reducta 63.1 6 0.0002 40.2 4.5 36 237-281 5-40 (437)
325 3v76_A Flavoprotein; structura 63.1 5.9 0.0002 40.7 4.4 35 236-282 27-61 (417)
326 2cul_A Glucose-inhibited divis 63.0 6.5 0.00022 36.4 4.3 33 236-280 3-35 (232)
327 3ew7_A LMO0794 protein; Q8Y8U8 62.8 21 0.00072 31.6 7.6 91 238-351 2-103 (221)
328 3dfz_A SIRC, precorrin-2 dehyd 62.5 6.1 0.00021 37.8 4.1 36 233-280 28-63 (223)
329 3m6i_A L-arabinitol 4-dehydrog 62.5 10 0.00034 37.5 5.9 57 211-279 156-212 (363)
330 2hqm_A GR, grase, glutathione 62.5 6 0.00021 40.9 4.4 35 235-281 10-44 (479)
331 3csu_A Protein (aspartate carb 62.4 67 0.0023 32.2 11.9 132 173-325 93-230 (310)
332 1fl2_A Alkyl hydroperoxide red 62.4 6.2 0.00021 37.2 4.2 32 237-280 2-33 (310)
333 3urh_A Dihydrolipoyl dehydroge 62.3 6.4 0.00022 40.7 4.5 34 236-281 25-58 (491)
334 3kd9_A Coenzyme A disulfide re 62.2 9.2 0.00031 38.9 5.7 37 236-282 3-39 (449)
335 2eq6_A Pyruvate dehydrogenase 62.2 6.1 0.00021 40.7 4.3 35 235-281 5-39 (464)
336 3gg2_A Sugar dehydrogenase, UD 62.1 5.8 0.0002 41.5 4.2 32 237-280 3-34 (450)
337 4a7p_A UDP-glucose dehydrogena 62.1 36 0.0012 35.6 10.2 33 236-280 8-40 (446)
338 3nrn_A Uncharacterized protein 62.0 7.5 0.00026 38.8 4.9 33 238-282 2-34 (421)
339 3vtz_A Glucose 1-dehydrogenase 62.0 28 0.00094 33.0 8.7 79 231-327 9-92 (269)
340 3nrc_A Enoyl-[acyl-carrier-pro 62.0 11 0.00037 35.9 5.8 78 233-327 23-114 (280)
341 3ktd_A Prephenate dehydrogenas 62.0 14 0.00049 37.2 7.0 89 237-351 9-101 (341)
342 1n2s_A DTDP-4-, DTDP-glucose o 61.8 7.8 0.00027 36.4 4.7 86 238-351 2-104 (299)
343 2qa2_A CABE, polyketide oxygen 61.8 6.6 0.00023 41.1 4.6 34 235-280 11-44 (499)
344 3k30_A Histamine dehydrogenase 61.8 8 0.00027 42.2 5.4 34 236-281 391-424 (690)
345 4gcm_A TRXR, thioredoxin reduc 61.8 6.7 0.00023 37.3 4.3 31 238-280 8-38 (312)
346 2qae_A Lipoamide, dihydrolipoy 61.8 6.9 0.00023 40.1 4.6 33 236-280 2-34 (468)
347 2a87_A TRXR, TR, thioredoxin r 61.6 5.5 0.00019 38.4 3.7 34 235-280 13-46 (335)
348 3qj4_A Renalase; FAD/NAD(P)-bi 61.6 4.6 0.00016 39.2 3.2 35 237-280 2-36 (342)
349 3ihm_A Styrene monooxygenase A 61.5 5.8 0.0002 40.3 4.0 32 237-280 23-54 (430)
350 3enk_A UDP-glucose 4-epimerase 61.2 20 0.00069 34.2 7.6 97 236-351 5-129 (341)
351 2qcu_A Aerobic glycerol-3-phos 61.0 7 0.00024 40.7 4.6 34 236-281 3-36 (501)
352 3ka7_A Oxidoreductase; structu 61.0 7.9 0.00027 38.4 4.8 32 238-281 2-33 (425)
353 2aqj_A Tryptophan halogenase, 60.9 6.8 0.00023 41.0 4.5 37 236-281 5-41 (538)
354 2e4g_A Tryptophan halogenase; 60.9 7 0.00024 41.3 4.6 38 236-282 25-62 (550)
355 1pl8_A Human sorbitol dehydrog 60.9 12 0.00042 36.9 6.2 49 219-279 156-204 (356)
356 1w4x_A Phenylacetone monooxyge 60.9 8.3 0.00028 40.6 5.2 36 234-281 14-49 (542)
357 2a8x_A Dihydrolipoyl dehydroge 60.8 6.9 0.00024 40.0 4.5 33 236-280 3-35 (464)
358 1oi7_A Succinyl-COA synthetase 60.8 8.3 0.00028 38.0 4.8 149 236-423 7-163 (288)
359 1q1r_A Putidaredoxin reductase 60.7 8.4 0.00029 39.2 5.1 37 236-282 4-40 (431)
360 3ntd_A FAD-dependent pyridine 60.7 9.1 0.00031 40.0 5.4 37 237-283 2-38 (565)
361 2o7s_A DHQ-SDH PR, bifunctiona 60.4 10 0.00035 40.3 5.8 36 233-280 361-396 (523)
362 2bka_A CC3, TAT-interacting pr 60.2 21 0.00071 32.4 7.2 102 234-351 16-132 (242)
363 3c4a_A Probable tryptophan hyd 60.1 7.9 0.00027 38.3 4.6 34 238-281 2-35 (381)
364 2yqu_A 2-oxoglutarate dehydrog 60.1 7.5 0.00026 39.7 4.5 33 237-281 2-34 (455)
365 2weu_A Tryptophan 5-halogenase 60.1 5.5 0.00019 41.2 3.6 37 237-282 3-39 (511)
366 1m6i_A Programmed cell death p 60.0 8.7 0.0003 40.0 5.1 38 235-282 10-47 (493)
367 1mo9_A ORF3; nucleotide bindin 59.9 7 0.00024 41.0 4.4 35 235-281 42-76 (523)
368 2bry_A NEDD9 interacting prote 59.6 7.9 0.00027 40.5 4.7 37 235-283 91-127 (497)
369 1yqd_A Sinapyl alcohol dehydro 59.5 18 0.00061 36.0 7.1 49 219-279 171-219 (366)
370 4b8w_A GDP-L-fucose synthase; 59.5 12 0.00041 34.8 5.6 93 233-351 3-113 (319)
371 1zq6_A Otcase, ornithine carba 59.4 76 0.0026 32.5 11.8 136 168-325 116-274 (359)
372 1zmd_A Dihydrolipoyl dehydroge 59.4 7.6 0.00026 39.8 4.5 34 236-281 6-39 (474)
373 3ics_A Coenzyme A-disulfide re 59.3 11 0.00036 40.0 5.7 39 235-283 35-73 (588)
374 3e48_A Putative nucleoside-dip 59.3 13 0.00043 34.9 5.7 97 238-351 2-106 (289)
375 3cgb_A Pyridine nucleotide-dis 59.2 6.6 0.00023 40.6 4.0 64 210-283 7-73 (480)
376 3qvo_A NMRA family protein; st 59.1 12 0.00042 34.2 5.5 101 234-351 21-125 (236)
377 3ek2_A Enoyl-(acyl-carrier-pro 58.7 8.3 0.00028 35.8 4.3 37 232-280 10-49 (271)
378 3ihg_A RDME; flavoenzyme, anth 58.6 7.3 0.00025 40.6 4.3 34 236-281 5-38 (535)
379 3gwf_A Cyclohexanone monooxyge 58.6 6.4 0.00022 41.8 3.9 36 235-281 7-42 (540)
380 4a5l_A Thioredoxin reductase; 58.6 7.1 0.00024 36.8 3.8 31 238-280 6-36 (314)
381 3uko_A Alcohol dehydrogenase c 58.6 18 0.00061 36.0 7.0 35 234-279 192-226 (378)
382 1ges_A Glutathione reductase; 58.5 6.7 0.00023 40.1 3.9 33 236-280 4-36 (450)
383 2q1s_A Putative nucleotide sug 58.4 15 0.00052 36.1 6.3 103 233-351 29-151 (377)
384 1dlj_A UDP-glucose dehydrogena 58.4 8.2 0.00028 39.5 4.5 30 238-280 2-31 (402)
385 2qa1_A PGAE, polyketide oxygen 58.3 8.1 0.00028 40.4 4.5 36 233-280 8-43 (500)
386 2wpf_A Trypanothione reductase 58.3 10 0.00036 39.4 5.4 32 236-278 7-38 (495)
387 4a2c_A Galactitol-1-phosphate 58.2 23 0.00079 34.4 7.6 55 213-279 139-193 (346)
388 2c20_A UDP-glucose 4-epimerase 58.2 17 0.00059 34.6 6.5 98 238-351 3-118 (330)
389 1ebd_A E3BD, dihydrolipoamide 58.1 7.4 0.00025 39.7 4.1 32 237-280 4-35 (455)
390 4gde_A UDP-galactopyranose mut 58.0 9.6 0.00033 38.7 4.9 23 236-258 10-32 (513)
391 3l8k_A Dihydrolipoyl dehydroge 57.9 9.3 0.00032 39.2 4.8 34 236-281 4-37 (466)
392 3fys_A Protein DEGV; fatty aci 57.8 6.4 0.00022 39.5 3.5 153 62-270 16-178 (315)
393 3c4n_A Uncharacterized protein 57.8 9.6 0.00033 38.2 4.8 35 237-281 37-71 (405)
394 1v59_A Dihydrolipoamide dehydr 57.6 8.5 0.00029 39.4 4.5 34 236-281 5-38 (478)
395 2bc0_A NADH oxidase; flavoprot 57.5 8.6 0.00029 39.8 4.6 37 236-281 35-71 (490)
396 2p5y_A UDP-glucose 4-epimerase 57.5 17 0.00059 34.4 6.4 98 238-351 2-117 (311)
397 1onf_A GR, grase, glutathione 57.5 8 0.00027 40.2 4.3 33 237-281 3-35 (500)
398 3e1t_A Halogenase; flavoprotei 57.4 7 0.00024 40.7 3.8 35 235-281 6-40 (512)
399 2zb4_A Prostaglandin reductase 57.3 18 0.00061 35.6 6.6 56 214-280 137-195 (357)
400 2v3a_A Rubredoxin reductase; a 57.2 8.2 0.00028 38.3 4.2 35 236-280 4-38 (384)
401 1lvl_A Dihydrolipoamide dehydr 57.2 8.7 0.0003 39.4 4.5 33 236-280 5-37 (458)
402 1e6u_A GDP-fucose synthetase; 57.1 12 0.00042 35.5 5.2 87 236-351 3-107 (321)
403 3pi7_A NADH oxidoreductase; gr 57.1 37 0.0013 33.3 8.9 76 225-325 155-242 (349)
404 3o0h_A Glutathione reductase; 56.9 9.8 0.00033 39.3 4.8 33 236-280 26-58 (484)
405 4eez_A Alcohol dehydrogenase 1 56.5 25 0.00086 34.2 7.5 48 220-279 149-196 (348)
406 1rsg_A FMS1 protein; FAD bindi 56.3 8.8 0.0003 39.8 4.4 25 234-258 6-30 (516)
407 3nyc_A D-arginine dehydrogenas 55.9 7 0.00024 37.8 3.3 34 235-281 8-41 (381)
408 1pvv_A Otcase, ornithine carba 55.8 83 0.0028 31.5 11.3 130 174-324 97-231 (315)
409 3oc4_A Oxidoreductase, pyridin 55.8 11 0.00037 38.5 4.9 36 237-282 3-38 (452)
410 2wm3_A NMRA-like family domain 55.8 4.8 0.00017 38.1 2.1 99 236-352 5-115 (299)
411 2cdc_A Glucose dehydrogenase g 55.8 29 0.00098 34.4 7.9 33 236-280 181-213 (366)
412 2e1m_A L-glutamate oxidase; L- 55.7 11 0.00036 38.7 4.8 35 234-280 42-76 (376)
413 3trj_A Phosphoheptose isomeras 55.6 14 0.00047 34.1 5.1 22 316-339 114-135 (201)
414 2r0c_A REBC; flavin adenine di 55.6 9 0.00031 40.5 4.4 33 236-280 26-58 (549)
415 3g3e_A D-amino-acid oxidase; F 55.5 9.7 0.00033 36.9 4.3 36 238-280 2-38 (351)
416 4hv4_A UDP-N-acetylmuramate--L 55.5 31 0.0011 36.1 8.5 105 236-378 22-130 (494)
417 3lad_A Dihydrolipoamide dehydr 55.4 11 0.00037 38.6 4.8 33 236-280 3-35 (476)
418 1uzm_A 3-oxoacyl-[acyl-carrier 55.4 27 0.00091 32.4 7.2 78 231-327 10-92 (247)
419 4ekn_B Aspartate carbamoyltran 55.3 1.1E+02 0.0036 30.6 11.9 136 168-326 87-228 (306)
420 2x4g_A Nucleoside-diphosphate- 55.2 25 0.00087 33.5 7.2 97 237-351 14-126 (342)
421 2pyx_A Tryptophan halogenase; 55.2 8.2 0.00028 40.3 4.0 39 236-281 7-52 (526)
422 2gqf_A Hypothetical protein HI 55.2 8.5 0.00029 39.1 4.0 35 236-282 4-38 (401)
423 3lov_A Protoporphyrinogen oxid 55.0 15 0.0005 37.3 5.7 36 236-281 4-39 (475)
424 1ojt_A Surface protein; redox- 55.0 10 0.00035 39.0 4.6 34 236-281 6-39 (482)
425 4fk1_A Putative thioredoxin re 54.8 10 0.00035 36.1 4.3 34 235-280 5-38 (304)
426 2dkn_A 3-alpha-hydroxysteroid 54.7 14 0.00049 33.5 5.1 68 238-327 3-73 (255)
427 2i0z_A NAD(FAD)-utilizing dehy 54.5 10 0.00035 38.8 4.4 34 237-282 27-60 (447)
428 1s3e_A Amine oxidase [flavin-c 54.4 11 0.00037 39.0 4.7 34 236-281 4-37 (520)
429 2vvm_A Monoamine oxidase N; FA 54.4 11 0.00038 38.5 4.7 32 237-280 40-71 (495)
430 1o94_A Tmadh, trimethylamine d 54.2 11 0.00037 41.5 4.9 34 236-281 389-422 (729)
431 2rgh_A Alpha-glycerophosphate 54.1 11 0.00037 40.3 4.7 34 236-281 32-65 (571)
432 2zcu_A Uncharacterized oxidore 54.1 8.3 0.00028 35.9 3.4 98 238-351 1-104 (286)
433 3atr_A Conserved archaeal prot 53.9 6.1 0.00021 40.3 2.6 35 236-282 6-40 (453)
434 1rp0_A ARA6, thiazole biosynth 53.8 11 0.00037 36.0 4.3 37 235-282 38-74 (284)
435 7mdh_A Protein (malate dehydro 53.8 13 0.00043 38.5 5.0 105 236-354 32-161 (375)
436 1lqt_A FPRA; NADP+ derivative, 53.7 11 0.00039 38.9 4.7 38 236-280 3-42 (456)
437 2yg5_A Putrescine oxidase; oxi 53.6 12 0.0004 37.7 4.6 35 235-281 4-38 (453)
438 2fzw_A Alcohol dehydrogenase c 53.6 27 0.00091 34.6 7.2 35 234-279 189-223 (373)
439 2c5a_A GDP-mannose-3', 5'-epim 53.6 41 0.0014 33.1 8.6 98 236-351 29-145 (379)
440 1xhc_A NADH oxidase /nitrite r 53.5 8 0.00027 38.6 3.4 35 236-283 8-42 (367)
441 3dk9_A Grase, GR, glutathione 53.5 9.8 0.00033 39.1 4.1 34 235-280 19-52 (478)
442 1cjc_A Protein (adrenodoxin re 53.4 14 0.00048 38.3 5.3 35 236-280 6-40 (460)
443 1p0f_A NADP-dependent alcohol 53.4 27 0.00092 34.6 7.2 34 235-279 191-224 (373)
444 3i1j_A Oxidoreductase, short c 53.3 23 0.00079 32.4 6.3 37 232-280 10-47 (247)
445 1vl0_A DTDP-4-dehydrorhamnose 53.3 12 0.00041 35.0 4.4 88 233-351 9-113 (292)
446 3i6d_A Protoporphyrinogen oxid 53.2 9.5 0.00033 38.1 3.9 38 237-280 6-43 (470)
447 2bi7_A UDP-galactopyranose mut 53.2 10 0.00035 38.1 4.2 34 236-281 3-36 (384)
448 2b9w_A Putative aminooxidase; 53.1 12 0.00041 37.2 4.6 35 235-280 5-39 (424)
449 3fpz_A Thiazole biosynthetic e 53.1 12 0.00043 36.1 4.6 36 235-280 64-99 (326)
450 1kyq_A Met8P, siroheme biosynt 53.0 7.6 0.00026 38.3 3.1 36 233-280 10-45 (274)
451 2cdu_A NADPH oxidase; flavoenz 52.9 12 0.0004 38.2 4.5 34 238-281 2-35 (452)
452 1kol_A Formaldehyde dehydrogen 52.6 24 0.00083 35.3 6.8 49 219-279 170-218 (398)
453 1wly_A CAAR, 2-haloacrylate re 52.4 23 0.00077 34.5 6.4 50 219-280 129-179 (333)
454 3sds_A Ornithine carbamoyltran 52.4 1.1E+02 0.0037 31.3 11.6 129 168-322 112-264 (353)
455 3da1_A Glycerol-3-phosphate de 52.3 9.6 0.00033 40.6 4.0 33 236-280 18-50 (561)
456 4b63_A L-ornithine N5 monooxyg 52.3 8.2 0.00028 40.4 3.4 42 239-280 42-85 (501)
457 4dgk_A Phytoene dehydrogenase; 52.2 9.8 0.00033 38.8 3.9 22 237-258 2-23 (501)
458 3ec7_A Putative dehydrogenase; 52.2 7.6 0.00026 38.7 3.0 96 234-348 21-116 (357)
459 4e2x_A TCAB9; kijanose, tetron 52.1 14 0.00048 37.1 5.0 79 236-339 319-397 (416)
460 1gte_A Dihydropyrimidine dehyd 52.0 11 0.00036 43.4 4.5 34 236-280 187-220 (1025)
461 1f8f_A Benzyl alcohol dehydrog 51.9 28 0.00097 34.4 7.1 50 219-279 174-223 (371)
462 1nhp_A NADH peroxidase; oxidor 51.9 9.9 0.00034 38.6 3.8 35 238-282 2-36 (447)
463 1fec_A Trypanothione reductase 51.8 15 0.00052 38.0 5.3 32 236-278 3-34 (490)
464 1y0p_A Fumarate reductase flav 51.7 14 0.00048 39.0 5.1 40 232-283 122-161 (571)
465 1e3j_A NADP(H)-dependent ketos 51.6 18 0.00061 35.6 5.6 48 219-279 153-200 (352)
466 3dqp_A Oxidoreductase YLBE; al 51.6 28 0.00096 31.2 6.5 94 238-351 2-106 (219)
467 4h7p_A Malate dehydrogenase; s 51.6 20 0.00067 36.5 5.9 115 233-354 21-153 (345)
468 4fs3_A Enoyl-[acyl-carrier-pro 51.5 15 0.0005 34.8 4.7 36 233-280 3-41 (256)
469 1xq6_A Unknown protein; struct 51.5 16 0.00055 33.0 4.8 100 235-351 3-133 (253)
470 3k13_A 5-methyltetrahydrofolat 51.5 36 0.0012 34.0 7.7 79 168-279 94-179 (300)
471 2bcg_G Secretory pathway GDP d 51.4 12 0.00042 38.3 4.4 35 236-282 11-45 (453)
472 2iid_A L-amino-acid oxidase; f 51.3 16 0.00055 37.3 5.3 33 236-280 33-65 (498)
473 1xdi_A RV3303C-LPDA; reductase 51.2 11 0.00037 39.1 4.1 36 237-281 3-38 (499)
474 3sc6_A DTDP-4-dehydrorhamnose 51.1 9.5 0.00032 35.7 3.3 83 238-351 7-106 (287)
475 1hdc_A 3-alpha, 20 beta-hydrox 51.0 14 0.00049 34.5 4.5 36 233-280 2-38 (254)
476 1pn0_A Phenol 2-monooxygenase; 50.7 12 0.0004 40.9 4.4 39 236-281 8-46 (665)
477 3l4b_C TRKA K+ channel protien 50.4 12 0.0004 34.3 3.7 92 238-352 2-100 (218)
478 3ko8_A NAD-dependent epimerase 50.2 50 0.0017 31.0 8.3 94 238-351 2-113 (312)
479 1e3i_A Alcohol dehydrogenase, 50.2 28 0.00094 34.5 6.7 35 234-279 194-228 (376)
480 2ivd_A PPO, PPOX, protoporphyr 50.1 11 0.00038 38.1 3.8 33 236-280 16-48 (478)
481 3nks_A Protoporphyrinogen oxid 50.1 12 0.00042 37.7 4.1 34 237-280 3-36 (477)
482 4dna_A Probable glutathione re 50.0 13 0.00043 38.1 4.3 33 236-280 5-37 (463)
483 1pj5_A N,N-dimethylglycine oxi 49.9 13 0.00044 41.3 4.6 36 236-282 4-39 (830)
484 1tzb_A Glucose-6-phosphate iso 49.9 90 0.0031 30.2 10.3 63 236-339 37-100 (302)
485 2yy7_A L-threonine dehydrogena 49.8 14 0.00046 34.9 4.2 98 237-350 3-117 (312)
486 3cmm_A Ubiquitin-activating en 49.7 11 0.00039 43.6 4.2 42 233-280 422-463 (1015)
487 3fpc_A NADP-dependent alcohol 49.7 27 0.00091 34.3 6.5 50 219-280 151-200 (352)
488 2cf5_A Atccad5, CAD, cinnamyl 49.6 34 0.0012 33.7 7.3 47 221-279 166-212 (357)
489 2i76_A Hypothetical protein; N 49.6 2.4 8.2E-05 40.8 -1.2 20 238-257 4-23 (276)
490 3n74_A 3-ketoacyl-(acyl-carrie 49.2 10 0.00035 35.2 3.2 77 232-327 5-94 (261)
491 3pvc_A TRNA 5-methylaminomethy 49.1 11 0.00038 41.0 3.8 34 236-281 264-297 (689)
492 1ml4_A Aspartate transcarbamoy 49.0 1E+02 0.0035 30.8 10.6 131 173-326 95-231 (308)
493 1ps9_A 2,4-dienoyl-COA reducta 48.9 12 0.00043 40.4 4.2 34 236-281 373-406 (671)
494 2ydy_A Methionine adenosyltran 48.8 31 0.0011 32.5 6.6 91 237-351 3-110 (315)
495 2q2v_A Beta-D-hydroxybutyrate 48.8 13 0.00046 34.5 3.9 35 234-280 2-37 (255)
496 3ps9_A TRNA 5-methylaminomethy 48.8 13 0.00043 40.3 4.2 33 237-281 273-305 (676)
497 2jhf_A Alcohol dehydrogenase E 48.8 30 0.001 34.3 6.7 34 235-279 191-224 (374)
498 4b7c_A Probable oxidoreductase 48.3 32 0.0011 33.4 6.7 51 217-279 131-182 (336)
499 3tzq_B Short-chain type dehydr 48.2 14 0.00049 34.9 4.1 77 232-327 7-96 (271)
500 2dtx_A Glucose 1-dehydrogenase 47.9 70 0.0024 29.9 8.9 37 233-280 5-41 (264)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=9.6e-188 Score=1486.54 Aligned_cols=494 Identities=52% Similarity=0.942 Sum_probs=485.5
Q ss_pred CcccccCCCchhHHHHHHHHHhhhHHHHHHHhhcCcccccccccccchHHHHHHHhhhhcCCCcceecccccchHHHHhh
Q 010990 1 MNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLK 80 (496)
Q Consensus 1 ~~~~~~~~~~l~ky~~L~~L~~~N~~Lfy~~l~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~ 80 (496)
+.||++++++|+||+||++||+|||+||||++.+|++|+|||+||||||++|++||++||+|+|+|||++|+|+++++++
T Consensus 47 ~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~ 126 (555)
T 1gq2_A 47 LKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQ 126 (555)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHTHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHH
T ss_pred HHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhhhHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHh
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCceEEEEecCcccccCCCCCCccccchhhhHHHHhhhcCCCCCceeeEEeecCCCchhcccCcccccccccCCCh
Q 010990 81 NWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATG 160 (496)
Q Consensus 81 n~~~~~v~viVVTDG~rILGLGDlG~~gm~I~~GKl~Ly~~~gGi~P~~~lPi~LDvgTnn~~Ll~DplYlG~r~~R~~g 160 (496)
|||.++|++||||||||||||||+|++||+||+||++|||+||||||++|||||||+|||||+||+||+|+||||+|++|
T Consensus 127 n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g 206 (555)
T 1gq2_A 127 SWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRG 206 (555)
T ss_dssp TSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHHHHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCT
T ss_pred cCCCCCcEEEEEEccccccccCCCCCCccccchhHHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCccHHHHHHHHcCCCceeecCCCchhHHHHHHHHHHHHHhCCCcccceEE
Q 010990 161 QEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFL 240 (496)
Q Consensus 161 ~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~af~iL~~yr~~~~~FnDDiQGTa~V~LAgll~Alr~~g~~l~d~riv 240 (496)
++||+|+||||++|+++|||+++||||||+++|||+||+|||++||||||||||||+|+|||||||+|++|++|+|||||
T Consensus 207 ~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv 286 (555)
T 1gq2_A 207 QAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVL 286 (555)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHHHHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEE
T ss_pred HHHHHHHHHHHHHHHHhhCCCcEEeecccCCccHHHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEE
Q 010990 241 FLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTIL 320 (496)
Q Consensus 241 ~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvL 320 (496)
|+|||+||+|||+||+++|+++ |+|+|||++|||||||+|||+++|. +|+++|++||++.++.++|+|+|+++|||||
T Consensus 287 ~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vl 364 (555)
T 1gq2_A 287 FQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRIWMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVL 364 (555)
T ss_dssp EECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTEEEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEE
T ss_pred EECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcEEEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEE
Confidence 9999999999999999999984 9999999999999999999999995 5999999999987778899999999999999
Q ss_pred EEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCCccc-CCeeeCccCccccc
Q 010990 321 IGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAY 399 (496)
Q Consensus 321 IG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsPf~pv~~-~G~~~~p~Q~NN~~ 399 (496)
||+|+++|+||+|+|++|+++|+|||||||||||+++||+||||++||+|+|||||||||+||+| +||+++|||+||+|
T Consensus 365 IG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~l 444 (555)
T 1gq2_A 365 IGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSY 444 (555)
T ss_dssp EECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSGGGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGG
T ss_pred EEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCCCccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEecccccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred ccchhhHHHHHhCCcccCHHHHHHHHHHHHhccccccCCCCcccCCCCCccchHHHHHHHHHHHHHHcCCCCCCCCchhH
Q 010990 400 IFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNL 479 (496)
Q Consensus 400 iFPGiglG~l~~~a~~itd~m~~aAA~aLA~~v~~e~l~~g~l~P~~~~ireVS~~VA~aV~~~A~~~GlA~~~~~p~d~ 479 (496)
+|||||||++++||++|||+|+++||+|||++++++++..+.|||++++||+||.+||.||+++|+++|+|+..++|+|+
T Consensus 445 iFPGi~~Gal~~~A~~Itd~M~~aAA~alA~~v~~~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~ 524 (555)
T 1gq2_A 445 VFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVSEENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDL 524 (555)
T ss_dssp THHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCCHHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSH
T ss_pred eccchhhhhHhcCCeECCHHHHHHHHHHHHhccccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888999
Q ss_pred HHHHHhCCcccCCCCCC
Q 010990 480 VKCAESCMYTPVYRNYR 496 (496)
Q Consensus 480 ~~~i~~~mw~P~Y~~~~ 496 (496)
.+|++++||+|+|+++.
T Consensus 525 ~~~i~~~~~~P~Y~~~~ 541 (555)
T 1gq2_A 525 EAFIRSQVYSTDYNCFV 541 (555)
T ss_dssp HHHHHTTSCCCSCCCCS
T ss_pred HHHHHHhccCCCCCCcc
Confidence 99999999999999873
No 2
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=5.4e-187 Score=1488.37 Aligned_cols=494 Identities=48% Similarity=0.873 Sum_probs=485.6
Q ss_pred CcccccCCCchhHHHHHHHHHhhhHHHHHHHhhcCcccccccccccchHHHHHHHhhhhcCCCcceeccccc--chHHHH
Q 010990 1 MNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK--GKILEV 78 (496)
Q Consensus 1 ~~~~~~~~~~l~ky~~L~~L~~~N~~Lfy~~l~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~--g~i~~~ 78 (496)
+.||++++++|+||+||++||+|||+||||++.+|++|+|||+||||||++|++||+|||+|+|+|||++|+ |+++++
T Consensus 83 ~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyrll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~ 162 (605)
T 1o0s_A 83 ITKLREQPNDLARYIQLDGLQDRNEKLFYRVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQI 162 (605)
T ss_dssp HHHHHHSSSHHHHHHHHHHHHHHCHHHHHHHHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHH
T ss_pred HHHHHcCCCcHHHHHHHHHhhcccchhhhhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred hhcCCCCCceEEEEecCcccccCCCCCCccccchhhhHHHHhhhcCCCCCceeeEEeecCCCchhcccCcccccccccCC
Q 010990 79 LKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRA 158 (496)
Q Consensus 79 l~n~~~~~v~viVVTDG~rILGLGDlG~~gm~I~~GKl~Ly~~~gGi~P~~~lPi~LDvgTnn~~Ll~DplYlG~r~~R~ 158 (496)
++|||.++|++||||||||||||||+|++||+||+||++|||+||||||++|||||||+|||||+||+||+|+||||+|+
T Consensus 163 l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv 242 (605)
T 1o0s_A 163 LSNWHEEDVRAIVVTDGERILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRV 242 (605)
T ss_dssp HTTSSCSCCCEEEEECSSCBTTTBCCGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCC
T ss_pred HhcCCCCCceEEEEEccccceecCCCCCCcCcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCccHHHHHHHHcCCCceeecCCCchhHHHHHHHHHHHHHhCCCcccce
Q 010990 159 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHR 238 (496)
Q Consensus 159 ~g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~af~iL~~yr~~~~~FnDDiQGTa~V~LAgll~Alr~~g~~l~d~r 238 (496)
+|++||+|+||||++++++|||+++||||||+++|||+||+|||++||||||||||||+|+|||||||+|++|++|+|||
T Consensus 243 ~g~~Yd~fvdefv~av~~~fGp~~~I~~EDf~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~r 322 (605)
T 1o0s_A 243 RGKDYDTLLDNFMKACTKKYGQKTLIQFEDFANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEK 322 (605)
T ss_dssp CSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCC
T ss_pred ChHHHHHHHHHHHHHHHHHhCCCcEeeHhhcCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCc
Q 010990 239 FLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPT 318 (496)
Q Consensus 239 iv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkpt 318 (496)
|||+|||+||+|||+||+++|++ +|+|+|||++||||||++|||+++|. +|+++|++||++.++.++|+|+|+++|||
T Consensus 323 iv~~GAGaAgigia~ll~~~m~~-~Gl~~eeA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpd 400 (605)
T 1o0s_A 323 YLFFGAGAASTGIAEMIVHQMQN-EGISKEEACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPG 400 (605)
T ss_dssp EEEECCSHHHHHHHHHHHHHHHT-TTCCHHHHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCS
T ss_pred EEEECCCHHHHHHHHHHHHHHHH-cCCChhhhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCC
Confidence 99999999999999999999987 59999999999999999999999995 59999999999877788999999999999
Q ss_pred EEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCCcccCCeeeCccCcccc
Q 010990 319 ILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNA 398 (496)
Q Consensus 319 vLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsPf~pv~~~G~~~~p~Q~NN~ 398 (496)
||||+|+++|+||+|||++|+++|+|||||||||||+++||+||||++||+|+|||||||||+||+|+||+++|||+||+
T Consensus 401 VlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~ 480 (605)
T 1o0s_A 401 ALIGASTVRGAFNEEVIRAMAEINERPIIFALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNA 480 (605)
T ss_dssp EEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGG
T ss_pred EEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHhCCcccCHHHHHHHHHHHHhccccccCCCCcccCCCCCccchHHHHHHHHHHHHHHcCCCCCCCCchh
Q 010990 399 YIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQN 478 (496)
Q Consensus 399 ~iFPGiglG~l~~~a~~itd~m~~aAA~aLA~~v~~e~l~~g~l~P~~~~ireVS~~VA~aV~~~A~~~GlA~~~~~p~d 478 (496)
|+|||||||++++||++|||+|+++||+|||++++++++..+.|||++++||+||.+||.||+++|+++|+|+..+.|+|
T Consensus 481 liFPGi~lGal~~~A~~Itd~M~~aAA~aLA~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~~~~~~d 560 (605)
T 1o0s_A 481 YIFPGVALGTILFQIRHVDNDLFLLAAKKVASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPED 560 (605)
T ss_dssp GTHHHHHHHHHHHTBSCCCHHHHHHHHHHHHHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCSSSCCSC
T ss_pred eeccchhhhhhhcCCeEcCHHHHHHHHHHHHhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888999
Q ss_pred HHHHHHhCCcccCCCCCC
Q 010990 479 LVKCAESCMYTPVYRNYR 496 (496)
Q Consensus 479 ~~~~i~~~mw~P~Y~~~~ 496 (496)
+.+|++++||+|+|+++.
T Consensus 561 ~~~~i~~~~w~P~Y~~~~ 578 (605)
T 1o0s_A 561 LEKYVRAQVYNTEYEELI 578 (605)
T ss_dssp HHHHHHHHSCCCSCCCCS
T ss_pred HHHHHHHhccCCCCCccc
Confidence 999999999999999873
No 3
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=8.1e-187 Score=1483.31 Aligned_cols=495 Identities=50% Similarity=0.926 Sum_probs=485.5
Q ss_pred CcccccCCCchhHHHHHHHHHhhhHHHHHHHhhcCcccccccccccchHHHHHHHhhhhcCCCcceecccccchHHHHhh
Q 010990 1 MNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLK 80 (496)
Q Consensus 1 ~~~~~~~~~~l~ky~~L~~L~~~N~~Lfy~~l~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~ 80 (496)
+.||++++++|+||+||++||+|||+||||++.+|++|+|||+||||||++|++||+|||+|+|+|||++|+|+|+++|+
T Consensus 49 ~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~ 128 (564)
T 1pj3_A 49 HRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVD 128 (564)
T ss_dssp HHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHHCHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHT
T ss_pred HHHHhcCCCcHHHHHHHHHhhcccceeehhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCceEEEEecCcccccCCCCCCccccchhhhHHHHhhhcCCCCCceeeEEeecCCCchhcccCcccccccccCCCh
Q 010990 81 NWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATG 160 (496)
Q Consensus 81 n~~~~~v~viVVTDG~rILGLGDlG~~gm~I~~GKl~Ly~~~gGi~P~~~lPi~LDvgTnn~~Ll~DplYlG~r~~R~~g 160 (496)
|||.++|++||||||||||||||+|++||+||+||++|||+||||||++|||||||+||||++||+||+|+||||+|++|
T Consensus 129 n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvGKl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g 208 (564)
T 1pj3_A 129 NWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRT 208 (564)
T ss_dssp TCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCS
T ss_pred hCCCCCceEEEEEcccccccCCCCCCCcccceehHHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCccHHHHHHHHcCCCceeecCCCchhHHHHHHHHHHHHHhCCCcccceEE
Q 010990 161 QEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFL 240 (496)
Q Consensus 161 ~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~af~iL~~yr~~~~~FnDDiQGTa~V~LAgll~Alr~~g~~l~d~riv 240 (496)
++||+|+||||++|+++|||+++||||||+++|||+||+|||++||||||||||||+|+|||||||+|++|++|+|||||
T Consensus 209 ~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv 288 (564)
T 1pj3_A 209 QQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKIL 288 (564)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHHHHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEE
T ss_pred hhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccHHHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCC--CCHHHHhcccCCc
Q 010990 241 FLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVIKPT 318 (496)
Q Consensus 241 ~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~--~~L~e~v~~vkpt 318 (496)
|+|||+||+|||+||+++|++ +|+|+|||++|||||||+|||+++|.++|+++|++||++.++. ++|+|+|+++|||
T Consensus 289 ~~GAGaAgigia~ll~~~m~~-~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~ 367 (564)
T 1pj3_A 289 FLGAGEAALGIANLIVMSMVE-NGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPS 367 (564)
T ss_dssp EECCSHHHHHHHHHHHHHHHH-TTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCS
T ss_pred EeCCCHHHHHHHHHHHHHHHH-cCCChHHhhCcEEEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCC
Confidence 999999999999999999988 5999999999999999999999999435999999999987766 7999999999999
Q ss_pred EEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCCccc-CCeeeCccCccc
Q 010990 319 ILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANN 397 (496)
Q Consensus 319 vLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsPf~pv~~-~G~~~~p~Q~NN 397 (496)
||||+|+++|+||+|||++|+++|+|||||||||||+++||+||||++||+|+|||||||||+||+| +||+++|||+||
T Consensus 368 vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN 447 (564)
T 1pj3_A 368 TIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNN 447 (564)
T ss_dssp EEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCSSGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCG
T ss_pred EEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCCCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccce
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred ccccchhhHHHHHhCCcccCHHHHHHHHHHHHhccccccCCCCcccCCCCCccchHHHHHHHHHHHHHHcCCCCCCCCch
Q 010990 398 AYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQ 477 (496)
Q Consensus 398 ~~iFPGiglG~l~~~a~~itd~m~~aAA~aLA~~v~~e~l~~g~l~P~~~~ireVS~~VA~aV~~~A~~~GlA~~~~~p~ 477 (496)
+|+|||||||++++||++|||+|+++||+|||++++++++..+.|||+++++|+||.+||.||+++|+++|+|+..++|+
T Consensus 448 ~liFPGi~~Gal~~~A~~Itd~M~~aAA~aLA~~v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~~~~~~ 527 (564)
T 1pj3_A 448 VYIFPGVALAVILCNTRHISDSVFLEAAKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPE 527 (564)
T ss_dssp GGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHTTCCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCS
T ss_pred eeeccchhhhhHhcCCeECCHHHHHHHHHHHHhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888899
Q ss_pred hHHHHHHhCCcccCCCCCC
Q 010990 478 NLVKCAESCMYTPVYRNYR 496 (496)
Q Consensus 478 d~~~~i~~~mw~P~Y~~~~ 496 (496)
|+.+|++++||+|+|+++.
T Consensus 528 d~~~~i~~~~~~p~Y~~~~ 546 (564)
T 1pj3_A 528 DKAKYVKERTWRSEYDSLL 546 (564)
T ss_dssp SHHHHHHHTCCCCSCCCCC
T ss_pred HHHHHHHHHhhCCCCCCcc
Confidence 9999999999999999873
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=1.3e-122 Score=970.44 Aligned_cols=382 Identities=31% Similarity=0.408 Sum_probs=347.7
Q ss_pred CcccccccccccchHHHHHHHhhhhcCCCcceecccccchHHHHhhcCCCCCceEEEEecCcccccCCCCCC-ccccchh
Q 010990 35 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGC-QGMGIPV 113 (496)
Q Consensus 35 ~~~e~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~-~gm~I~~ 113 (496)
+.++ ||++||||||++|++|+ +|++++++++.+| ++|||||||||||||||+|+ +||||||
T Consensus 57 ~~~d-LslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpIme 118 (487)
T 3nv9_A 57 GFNW-FNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGVME 118 (487)
T ss_dssp SGGG-HHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHHHH
T ss_pred CHHH-CeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCchhh
Confidence 4445 99999999999999987 5677888666665 69999999999999999999 5899999
Q ss_pred hhHHHHhhhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCcc
Q 010990 114 GKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN 193 (496)
Q Consensus 114 GKl~Ly~~~gGi~P~~~lPi~LDvgTnn~~Ll~DplYlG~r~~R~~g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~ 193 (496)
||++|||+||||| |||||||+||+| +++|| |+|| |||+++.++||. ||||||++||
T Consensus 119 GKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------defv-e~v~~~~P~fG~---InlEDf~ap~ 174 (487)
T 3nv9_A 119 GKALLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAVI-EFVQRIQHTFGA---INLEDISQPN 174 (487)
T ss_dssp HHHHHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHHH-HHHHHHGGGCSE---EEECSCCTTH
T ss_pred hHHHHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HHHH-HHHHHhCCCCCe---ecHhhcCCch
Confidence 9999999999999 999999999754 34553 4444 677777788877 9999999999
Q ss_pred HHHHHHHHcC--CCceeecCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhc
Q 010990 194 AFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETR 271 (496)
Q Consensus 194 af~iL~~yr~--~~~~FnDDiQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~ 271 (496)
||+||+|||+ +||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+. .|+++
T Consensus 175 af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~---- 245 (487)
T 3nv9_A 175 CYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP---- 245 (487)
T ss_dssp HHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG----
T ss_pred HHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc----
Confidence 9999999998 899999999999999999999999999999999999999999999999999975 49986
Q ss_pred CcEEEEcCCCcccCCCcCCC-----chhchhhccccC--CCCCHHHHhcccCCcEEEEccCC-CCCCCHHHHHHHHccCC
Q 010990 272 KKICLVDSKGLIVSSRKDSL-----QHFKKPWAHEHE--PVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASFNE 343 (496)
Q Consensus 272 ~~i~~vD~~GLi~~~r~~~l-----~~~k~~~a~~~~--~~~~L~e~v~~vkptvLIG~S~~-~g~Ft~evv~~M~~~~~ 343 (496)
+|||||||+|||+++|. +| .++|.+||++.. ..++|+|+|++ +|||||+|++ +|+||+|+|++|+ +
T Consensus 246 ~~i~l~D~~Gli~~~R~-~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma---~ 319 (487)
T 3nv9_A 246 KKIVMFDSKGSLHNGRE-DIKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG---E 319 (487)
T ss_dssp GGEEEEETTEECCTTCH-HHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC---S
T ss_pred ccEEEEeccccccCCcc-hhhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc---C
Confidence 89999999999999995 36 346778888653 46899999998 7999999976 7999999999996 8
Q ss_pred CceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCCcccCCeeeCccCcccccccchhhHHHHHhCCcccCHHHHHH
Q 010990 344 KPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLA 423 (496)
Q Consensus 344 rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~itd~m~~a 423 (496)
||||||||||| |||+||||++ +|+||||||| +++|||+||+|+|||||||++++||++|||+|+++
T Consensus 320 ~PIIFaLSNPt--pEi~pe~A~~--~G~aIvATGr----------sd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~~A 385 (487)
T 3nv9_A 320 KPIVFCCANPV--PEIYPYEAKE--AGAYIVATGR----------GDFPNQVNNSVGFPGILKGALIVRARKITDNMAIA 385 (487)
T ss_dssp SCEEEECCSSS--CSSCHHHHHH--TTCSEEEESC----------TTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHHHH
T ss_pred CCEEEECCCCC--ccCCHHHHHH--hCCEEEEECC----------CCCcccCcceeEcchhhHHHHHcCCcccCHHHHHH
Confidence 99999999999 7999999997 5999999994 78899999999999999999999999999999999
Q ss_pred HHHHHHhccccccCCCCcccCCCCCccchHHHHHHHHHHHHHHcCCCCCC-CCchhHHHHHHhCCc
Q 010990 424 ASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRL-PRPQNLVKCAESCMY 488 (496)
Q Consensus 424 AA~aLA~~v~~e~l~~g~l~P~~~~ireVS~~VA~aV~~~A~~~GlA~~~-~~p~d~~~~i~~~mw 488 (496)
||++||++++++++.++.|||++++ ++||.+||.||+++|+++|+|+.. ++++++.++++++|-
T Consensus 386 AA~ALA~~v~~~~l~~~~i~P~~~d-~~Vs~~VA~AVa~aA~~~GvA~~~~~~~~~~~~~~~~~~~ 450 (487)
T 3nv9_A 386 ASRALAEFAEKRGINPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVARVTDLTWQQVYDIAEHDIK 450 (487)
T ss_dssp HHHHHHHHHHHTCCBTTBCSCCTTC-TTHHHHHHHHHHHHHHHHTCCSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCcccCCCCceeCCccc-cchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999 799999999999999999999976 678999999988753
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=2.8e-114 Score=897.85 Aligned_cols=361 Identities=29% Similarity=0.426 Sum_probs=333.0
Q ss_pred HHHHHHhhcCcccccccccccchHHHHHHHhhhhcCCCcceecccccchHHHHhhcCCCCCceEEEEecCcccccCCCCC
Q 010990 26 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 105 (496)
Q Consensus 26 ~Lfy~~l~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG 105 (496)
.+++++..++.|+ |||+||||||++|++|+ + |+++++ +|+.++++|+|||||||||||||+|
T Consensus 23 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~i~---~----------~p~~v~----~~t~~~~~V~VvTdG~~iLGLGD~G 84 (398)
T 2a9f_A 23 EVQPKVDIKTKHD-LSIAYTPGVASVSSAIA---K----------DKTLAY----DLTTKKNTVAVISDGTAVLGLGDIG 84 (398)
T ss_dssp EEEESSCCSSHHH-HHHHSTTTTHHHHHHHH---H----------CGGGHH----HHSGGGTEEEEEECSSSCTTSCCCC
T ss_pred EEEEecccCCHHH-CeEEECchHHHHHHHHH---h----------CHHHHH----HhcccCCEEEEEECCccccCCCCcc
Confidence 3456667777655 89999999999999987 3 445555 7889999999999999999999999
Q ss_pred Cc-cccchhhhHHHHhhhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhhCCC-ee
Q 010990 106 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 183 (496)
Q Consensus 106 ~~-gm~I~~GKl~Ly~~~gGi~P~~~lPi~LDvgTnn~~Ll~DplYlG~r~~R~~g~~y~~~vdefv~av~~~fGp~-~l 183 (496)
++ |||||+||+.|||+||||| |+|||||+|| +||||+++++.| |. +.
T Consensus 85 ~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~ 133 (398)
T 2a9f_A 85 PEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGG 133 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeE
Confidence 98 9999999999999999999 9999999996 699999999988 77 88
Q ss_pred eEeeeCCCccHHHHHHHHcC--CCceeecCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 010990 184 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 261 (496)
Q Consensus 184 i~~EDf~~~~af~iL~~yr~--~~~~FnDDiQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~ 261 (496)
||||||++||||++|+|||+ +||||||||||||+|+|||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 134 I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~--- 210 (398)
T 2a9f_A 134 INLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA--- 210 (398)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc---
Confidence 99999999999999999997 5999999999999999999999999999999999999999999999999999875
Q ss_pred hcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCC---CCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHH
Q 010990 262 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM 338 (496)
Q Consensus 262 ~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~---~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M 338 (496)
|. ++||++|++|||+++|.+.|+++|++||++... ..+|+|+|++ +|||||+|+ +|+||+|+|++|
T Consensus 211 --Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~M 279 (398)
T 2a9f_A 211 --GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKM 279 (398)
T ss_dssp --TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTS
T ss_pred --CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhh
Confidence 75 899999999999999933599999999987543 4689999998 899999999 899999999999
Q ss_pred HccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCCcccCCeeeCccCcccccccchhhHHHHHhCCcccCH
Q 010990 339 ASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHD 418 (496)
Q Consensus 339 ~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~itd 418 (496)
+ ++|||||||||| |||+||||++| |+|||||| |+++|||+||+|+|||||||++++||++|||
T Consensus 280 a---~~pIIfalsNPt--~E~~pe~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d 342 (398)
T 2a9f_A 280 A---ARPVIFAMANPI--PEIYPDEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTITV 342 (398)
T ss_dssp C---SSCEEEECCSSS--CSSCHHHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCCH
T ss_pred C---CCCEEEECCCCC--ccCCHHHHHHh--CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcCCcCCCH
Confidence 7 899999999999 89999999999 99999999 6899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCCCCcccCCCCCccchHHHHHHHHHHHHHHc
Q 010990 419 DMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYEL 467 (496)
Q Consensus 419 ~m~~aAA~aLA~~v~~e~l~~g~l~P~~~~ireVS~~VA~aV~~~A~~~ 467 (496)
+|+++||++||++++++++.+++|||++++ ++||.+||.||+++|+++
T Consensus 343 ~m~~aAa~alA~~~~~~~~~~~~i~P~~~~-~~v~~~VA~aVa~~A~~~ 390 (398)
T 2a9f_A 343 EMQIAAAKGIASLVPDDALSTTNIIPDAFK-EGVAEIVAKSVRSVVLKS 390 (398)
T ss_dssp HHHHHHHHHHHHTCSSCSSCCSCCSCSSTT-HHHHHHHTTTTCCCCC--
T ss_pred HHHHHHHHHHHhcCCcccCCCCccCCCCCc-chhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 999999999999999864
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=1.2e-108 Score=854.51 Aligned_cols=354 Identities=31% Similarity=0.445 Sum_probs=330.7
Q ss_pred HHHHHHhhcCcccccccccccchHHHHHHHhhhhcCCCcceecccccchHHHHhhcCCCCCceEEEEecCcccccCCCCC
Q 010990 26 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 105 (496)
Q Consensus 26 ~Lfy~~l~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG 105 (496)
..++++..++.|+ |||+||||||++|++|+ ++|. +++ +|+.++++++|||||||||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~----------~v~----~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPE----------KTY----VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGG----------GHH----HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHH----------HHH----hhcccCCeEEEEECCccccCCCccc
Confidence 4567778888877 89999999999999987 4554 444 7899999999999999999999999
Q ss_pred Cc-cccchhhhHHHHhhhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhhCCC-ee
Q 010990 106 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 183 (496)
Q Consensus 106 ~~-gm~I~~GKl~Ly~~~gGi~P~~~lPi~LDvgTnn~~Ll~DplYlG~r~~R~~g~~y~~~vdefv~av~~~fGp~-~l 183 (496)
++ |||||+||++||++||||| ++|||||+|| +||||+++++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 98 9999999999999999999 9999999996 699999999988 77 88
Q ss_pred eEeeeCCCccHHHHHHHHcC--CCceeecCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 010990 184 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 261 (496)
Q Consensus 184 i~~EDf~~~~af~iL~~yr~--~~~~FnDDiQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~ 261 (496)
||||||+++|||++|+|||+ +||||||||||||+|++||++||+|++|++++|+||||+|||+||+++|++|+..
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC---
Confidence 99999999999999999997 6999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCChhhhcCcEEEEcCCCcccCCCcCC-CchhchhhccccCC---CCCHHHHhcccCCcEEEEccCCCCCCCHHHHHH
Q 010990 262 QTKAPVEETRKKICLVDSKGLIVSSRKDS-LQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEA 337 (496)
Q Consensus 262 ~~G~~~eeA~~~i~~vD~~GLi~~~r~~~-l~~~k~~~a~~~~~---~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~ 337 (496)
|. ++||++|++|||+.+|.+. |+++|++||++... ..+|+|+|+. +|||||+|+ +|+||+|+|+.
T Consensus 215 --G~------~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~ 283 (388)
T 1vl6_A 215 --GV------KNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKK 283 (388)
T ss_dssp --TC------CEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTT
T ss_pred --CC------CeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHh
Confidence 63 8999999999999999543 99999999987543 4689999998 899999999 79999999999
Q ss_pred HHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCCcccCCeeeCccCcccccccchhhHHHHHhCCcccC
Q 010990 338 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVH 417 (496)
Q Consensus 338 M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~it 417 (496)
|+ ++||||+||||| |||+||||++| |+|||||| |+++|||+||+|+|||||+|++++||+ ||
T Consensus 284 Ma---~~pIIfalSNPt--~E~~p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i~ 345 (388)
T 1vl6_A 284 MS---RKPVIFALANPV--PEIDPELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-IT 345 (388)
T ss_dssp SC---SSCEEEECCSSS--CSSCHHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-CC
T ss_pred cC---CCCEEEEcCCCC--CCCCHHHHHHh--cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCCc-cC
Confidence 97 799999999999 89999999999 99999999 589999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHhccccccCCCCcccCCCCCccchHHHHHHHHHHHH
Q 010990 418 DDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKA 464 (496)
Q Consensus 418 d~m~~aAA~aLA~~v~~e~l~~g~l~P~~~~ireVS~~VA~aV~~~A 464 (496)
|+|+++||++||+++ ++.+++|||++++ ++||.+||.||+++|
T Consensus 346 ~~m~~aAa~alA~~~---~~~~~~i~P~~~~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 346 KNMLLSAVEAIARSC---EPEPERIIPEAFD-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp HHHHHHHHHHHHHTS---CCBTTBSSCCTTC-HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhhh---ccCCCcccCCCCc-chhhHHHHHHHHhhC
Confidence 999999999999999 7789999999999 999999999999865
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=2.2e-87 Score=706.62 Aligned_cols=384 Identities=30% Similarity=0.438 Sum_probs=346.3
Q ss_pred HHHHHhhcCcccccccccccchHHHHHHHhhhhcCCCcceecccccchHHHHhhcCCCCCceEEEEecCcccccCCCCCC
Q 010990 27 LFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGC 106 (496)
Q Consensus 27 Lfy~~l~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~ 106 (496)
.++++..++.++ |||+||||||++|++|+ +|++++++ ||.++++++|||||+|||||||+|.
T Consensus 22 ~~~~~~~~~~~~-l~~~YtP~v~~~c~~~~-------------~~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG~ 83 (439)
T 2dvm_A 22 VIPKVSLESREE-LTLAYTPGVAEPCKEIA-------------RDPGKVYE----YTSKGNLVAVVSDGSRILGLGNIGP 83 (439)
T ss_dssp EEESSCCCSHHH-HHHHSTTTTHHHHHHHH-------------HCGGGHHH----HSSGGGEEEEEECSTTBTTTBCCCH
T ss_pred EEEeeccCCHHH-CeeEECchhHHHHHHHH-------------HCHHHHHh----hcccCcEEEEEECCCeEecccceec
Confidence 344556666655 89999999999999998 36777774 8888999999999999999999999
Q ss_pred c-cccchhhhHHHHhhhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhhCCC-eee
Q 010990 107 Q-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VLI 184 (496)
Q Consensus 107 ~-gm~I~~GKl~Ly~~~gGi~P~~~lPi~LDvgTnn~~Ll~DplYlG~r~~R~~g~~y~~~vdefv~av~~~fGp~-~li 184 (496)
+ ++|+++||+.||++||||| ++|+++|+. + .|+|+++++..| |+ ..+
T Consensus 84 hS~sPvmh~ka~lf~~~gGid---~~yi~ldv~-d--------------------------~de~~~~v~~l~-~~f~Gi 132 (439)
T 2dvm_A 84 LAGLPVMEGKALLFKRFGGVD---AFPIMIKEQ-E--------------------------PNKFIDIVKAIA-PTFGGI 132 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHCCE---EEEEECSCC-S--------------------------HHHHHHHHHHTG-GGCSEE
T ss_pred cccCHHHHHHHHHHHHhCCCC---CeeeeeecC-C--------------------------HHHHHHHHHHhC-ccCcEE
Confidence 7 7999999999999999999 999999993 2 467777776655 44 459
Q ss_pred EeeeCCCccHHHHHHHHcC--CCceeecCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHh
Q 010990 185 QFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 262 (496)
Q Consensus 185 ~~EDf~~~~af~iL~~yr~--~~~~FnDDiQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~ 262 (496)
|||||+.||||++|++|++ ++||||||+||||.+.++|+++|++..|++++++|+||+|||+||.+|+.+|.+.
T Consensus 133 nvED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~---- 208 (439)
T 2dvm_A 133 NLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEA---- 208 (439)
T ss_dssp EECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHT----
T ss_pred EEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHc----
Confidence 9999999999999999987 7999999999999999999999999999999999999999999999999999863
Q ss_pred cCCChhhhcCcEEEEc----CCCcccCCCcCC---CchhchhhccccC---CCCCHHHHhcccCCcEEEEccCCC-CCCC
Q 010990 263 TKAPVEETRKKICLVD----SKGLIVSSRKDS---LQHFKKPWAHEHE---PVNNLLDAVKVIKPTILIGSSGVG-RTFT 331 (496)
Q Consensus 263 ~G~~~eeA~~~i~~vD----~~GLi~~~r~~~---l~~~k~~~a~~~~---~~~~L~e~v~~vkptvLIG~S~~~-g~Ft 331 (496)
|+++ ++||++| ++||+++. +. +.++|++|++... ...+|.|+++. +|+|||+|+.+ |.|+
T Consensus 209 -G~~~----~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~~ 279 (439)
T 2dvm_A 209 -GVKP----ENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVIK 279 (439)
T ss_dssp -TCCG----GGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSSC
T ss_pred -CCCc----CeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCCC
Confidence 8753 7899999 99999886 24 7788888887533 24689999987 99999999985 8999
Q ss_pred HHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCCcccCCeeeCccCcccccccchhhHHHHHh
Q 010990 332 KEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVIS 411 (496)
Q Consensus 332 ~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~ 411 (496)
+++++.|+ ++||||+||||+ +||++++|.+| |++++||| +++.|+|+||+|+|||||+|++++
T Consensus 280 ~e~v~~m~---~~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~~ 342 (439)
T 2dvm_A 280 PQWIEKMN---EDAIVFPLANPV--PEILPEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALDV 342 (439)
T ss_dssp HHHHTTSC---TTCEEEECCSSS--CSSCHHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHHT
T ss_pred hHHHHhcC---CCCEEEECCCCC--CcchHHHHHHc--CCeEEcCC----------CchhHHHHHHHhcccCchHHHHhc
Confidence 99999886 899999999999 89999999998 89999999 589999999999999999999999
Q ss_pred CCcccCHHHHHHHHHHHHhccccccCCCCcccCCCCCccchHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccC
Q 010990 412 GAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPV 491 (496)
Q Consensus 412 ~a~~itd~m~~aAA~aLA~~v~~e~l~~g~l~P~~~~ireVS~~VA~aV~~~A~~~GlA~~~~~p~d~~~~i~~~mw~P~ 491 (496)
||++|||+|+++||++||++++++ .+++|||++++ ++||.+||.||+++|+++|+|+..++|+|+.++++++||.+.
T Consensus 343 ~a~~i~~~m~~aaa~ala~~~~~~--~~~~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~~~~~~~~~~~~~~~~~~~~ 419 (439)
T 2dvm_A 343 RARTITDSMIIAAAKAIASIVEEP--SEENIIPSPLN-PIVYAREARAVAEEAMKEGVARTKVKGEWVEEHTIRLIEFYE 419 (439)
T ss_dssp TCSCCCHHHHHHHHHHHHHTSSSC--BTTBCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhhCccc--cCCccCCCccc-chhhHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHhhhhH
Confidence 999999999999999999999876 78999999999 999999999999999999999987889999999999999876
Q ss_pred C
Q 010990 492 Y 492 (496)
Q Consensus 492 Y 492 (496)
|
T Consensus 420 ~ 420 (439)
T 2dvm_A 420 N 420 (439)
T ss_dssp H
T ss_pred H
Confidence 4
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.94 E-value=9.4e-09 Score=108.42 Aligned_cols=168 Identities=11% Similarity=0.179 Sum_probs=125.7
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCccHHHHH---------------------HHHc-------CCCcee-
Q 010990 158 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELL---------------------AKYG-------TTHLVF- 208 (496)
Q Consensus 158 ~~g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~af~iL---------------------~~yr-------~~~~~F- 208 (496)
-+.+||+..++..+.. ..++|+.++ |-+..=...+- .||+ ..+|+|
T Consensus 112 ~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~ 186 (435)
T 3gvp_A 112 ESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMN 186 (435)
T ss_dssp CCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEE
T ss_pred CCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEE
Confidence 3667888878776642 346787666 55543333222 3443 269999
Q ss_pred ---------ecCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 209 ---------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 209 ---------nDDiQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
.|+++||+.++++|+..+ ++..|.+.+++|+|+|..|.++|+.+... |. +++++|+
T Consensus 187 vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra~-----Ga-------~Viv~D~ 251 (435)
T 3gvp_A 187 VNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKAM-----GS-------IVYVTEI 251 (435)
T ss_dssp CTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECS
T ss_pred ecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeC
Confidence 899999999999999765 78999999999999999999999998643 64 5888887
Q ss_pred CCcccCCCcCCCchhchhhccc-cCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCC
Q 010990 280 KGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSE 358 (496)
Q Consensus 280 ~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E 358 (496)
+.. +...|.. .-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++. .|
T Consensus 252 dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~E 312 (435)
T 3gvp_A 252 DPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--TE 312 (435)
T ss_dssp CHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--TT
T ss_pred Chh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--cc
Confidence 531 1111211 1113579999986 99999998888899999999996 788999999997 78
Q ss_pred CCHHHH
Q 010990 359 CTAEEA 364 (496)
Q Consensus 359 ~~peda 364 (496)
+..+..
T Consensus 313 Id~~~L 318 (435)
T 3gvp_A 313 IDVASL 318 (435)
T ss_dssp BTGGGG
T ss_pred CCHHHH
Confidence 887665
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.86 E-value=7.8e-09 Score=109.13 Aligned_cols=130 Identities=16% Similarity=0.175 Sum_probs=105.5
Q ss_pred CCCcee----------ecCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 010990 203 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 272 (496)
Q Consensus 203 ~~~~~F----------nDDiQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~ 272 (496)
..+|+| .|+++||+.+++++++. .++..|.+.+++|+|.|..|.++|+.+... |.
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 589999 89999999999999965 569999999999999999999999998653 64
Q ss_pred cEEEEcCCCcccCCCcCCCchhchhhccc-cCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecC
Q 010990 273 KICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 273 ~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLS 351 (496)
+++++|++. .+...|.. .....+|.|+++. +|+++.+++..+.++++.++.|. +..||+-+|
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 588888742 11111211 1123589999987 99999988888899999999996 789999999
Q ss_pred CCCCCCCCCHHHHhc
Q 010990 352 NPTSQSECTAEEAYT 366 (496)
Q Consensus 352 NPt~~~E~~peda~~ 366 (496)
++. .|+.++...+
T Consensus 299 Rg~--vEID~~~L~~ 311 (436)
T 3h9u_A 299 HFD--TEIQVAWLKA 311 (436)
T ss_dssp SSG--GGBCHHHHHH
T ss_pred CCC--CccCHHHHHh
Confidence 997 8999987754
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.38 E-value=9.1e-07 Score=92.03 Aligned_cols=218 Identities=18% Similarity=0.242 Sum_probs=130.3
Q ss_pred ccchHHHHhhcCCCCCceEEEEecCcccccCCCCCCc--cccchhhhHHHHhhhcCCCCCceeeEEeecCCCchhcccCc
Q 010990 71 EKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDE 148 (496)
Q Consensus 71 d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~~--gm~I~~GKl~Ly~~~gGi~P~~~lPi~LDvgTnn~~Ll~Dp 148 (496)
++..++++.+ .+.+|+|.|+++..+|++|.+.. |+.|+.+ ..+|. | +++|.+.+-.
T Consensus 26 tP~~v~~L~~----~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~p~------- 83 (401)
T 1x13_A 26 TPKTVEQLLK----LGFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNAPL------- 83 (401)
T ss_dssp CHHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSCCC-------
T ss_pred CHHHHHHHHH----CCCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCCCC-------
Confidence 4456666665 45789999999999999999886 8899888 66765 2 4777765321
Q ss_pred ccccccccCCChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCC-CccHHHHHHHHc-CCCceee-cCCC----------ch
Q 010990 149 FYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFA-NHNAFELLAKYG-TTHLVFN-DDIQ----------GT 215 (496)
Q Consensus 149 lYlG~r~~R~~g~~y~~~vdefv~av~~~fGp~~li~~EDf~-~~~af~iL~~yr-~~~~~Fn-DDiQ----------GT 215 (496)
.+.++.+++ ...+|.+=..+ ++. ++++.+ ..+.+|+ +.+. .+
T Consensus 84 -------------------~~~i~~l~~---~~~li~~~~~~~d~~---~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~ 138 (401)
T 1x13_A 84 -------------------DDEIALLNP---GTTLVSFIWPAQNPE---LMQKLAERNVTVMAMDSVPRISRAQSLDALS 138 (401)
T ss_dssp -------------------HHHHTTCCT---TCEEEECCCGGGCHH---HHHHHHHTTCEEEEGGGCCCSGGGGGGCHHH
T ss_pred -------------------HHHHHHhcC---CCcEEEEecCCCCHH---HHHHHHHCCCEEEEeehhhhhhhhcccchHH
Confidence 233333322 11223222222 222 333332 4677773 2222 45
Q ss_pred hHHHHHHHHHHHHHh----CC----------CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 216 ASVVLAGVVAALKLI----GG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 216 a~V~LAgll~Alr~~----g~----------~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
....+|| .+|++.. ++ .+...||+|+|+|.+|.++++.+... |. +++++|++.
T Consensus 139 ~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~v~D~~~ 205 (401)
T 1x13_A 139 SMANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSL-----GA-------IVRAFDTRP 205 (401)
T ss_dssp HHHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCG
T ss_pred HHHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCCH
Confidence 5555555 3344332 22 25688999999999999999887642 53 588999864
Q ss_pred cccCCCcCCCch------------hchhhccccCC------CCCHHHHhcccCCcEEEEccCC-----CCCCCHHHHHHH
Q 010990 282 LIVSSRKDSLQH------------FKKPWAHEHEP------VNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAM 338 (496)
Q Consensus 282 Li~~~r~~~l~~------------~k~~~a~~~~~------~~~L~e~v~~vkptvLIG~S~~-----~g~Ft~evv~~M 338 (496)
-..+.. ..+.. .+..|++...+ ..+|.+.++. .|++|++... +.+++++.++.|
T Consensus 206 ~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~m 282 (401)
T 1x13_A 206 EVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSM 282 (401)
T ss_dssp GGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTS
T ss_pred HHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcC
Confidence 321100 00100 00011111000 0147788876 9999999533 257899999999
Q ss_pred HccCCCceEEecCCCC
Q 010990 339 ASFNEKPLILALSNPT 354 (496)
Q Consensus 339 ~~~~~rPIIFaLSNPt 354 (496)
. +..+|+-+|+|.
T Consensus 283 k---~g~vIVdva~~~ 295 (401)
T 1x13_A 283 K---AGSVIVDLAAQN 295 (401)
T ss_dssp C---TTCEEEETTGGG
T ss_pred C---CCcEEEEEcCCC
Confidence 6 688999999873
No 11
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.91 E-value=5.7e-05 Score=80.23 Aligned_cols=128 Identities=16% Similarity=0.185 Sum_probs=97.8
Q ss_pred CCCcee----------ecCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 010990 203 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 272 (496)
Q Consensus 203 ~~~~~F----------nDDiQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~ 272 (496)
..+|+| .|...||+-.++.|+. |.++..|...+++|+|.|..|.++|+.+... |+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-----Ga------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-----GA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHHC-----CC-------
Confidence 479999 5778999999888885 5679999999999999999999999988642 64
Q ss_pred cEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecC
Q 010990 273 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 273 ~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLS 351 (496)
+++++|++.. +...|. ..-...+|.|+++. .|+++-+++..+.++++.++.|. +..||.-.+
T Consensus 272 ~Viv~d~dp~------------~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDPI------------CALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIG 334 (464)
T ss_dssp EEEEECSSHH------------HHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECS
T ss_pred EEEEEeCCcc------------hhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcC
Confidence 5888876321 111111 11112579999986 99999988878899999999996 788998888
Q ss_pred CCCCCCCCCHHHH
Q 010990 352 NPTSQSECTAEEA 364 (496)
Q Consensus 352 NPt~~~E~~peda 364 (496)
+.. .|+..+..
T Consensus 335 Rgd--vEID~~aL 345 (464)
T 3n58_A 335 HFD--NEIQVAAL 345 (464)
T ss_dssp SST--TTBTCGGG
T ss_pred CCC--cccCHHHH
Confidence 876 56665544
No 12
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.90 E-value=3.7e-05 Score=82.34 Aligned_cols=131 Identities=16% Similarity=0.196 Sum_probs=100.7
Q ss_pred CCCcee----------ecCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 010990 203 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 272 (496)
Q Consensus 203 ~~~~~F----------nDDiQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~ 272 (496)
..+|+| .|+++||+..++.++. |.++..|.+.+++|.|+|..|.++|+.+.. .|.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa-----~GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQ-----AGA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHH-----CCC-------
Confidence 479999 6889999999999886 788999999999999999999889888865 363
Q ss_pred cEEEEcCCCcccCCCcCCCchhchhhc-cccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecC
Q 010990 273 KICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 273 ~i~~vD~~GLi~~~r~~~l~~~k~~~a-~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLS 351 (496)
+++++|++.. +...+ ...-...++.++++. .|+++-.++..+.++.+.++.|. +..||+-.+
T Consensus 290 ~Viv~D~~~~------------~a~~Aa~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG 352 (488)
T 3ond_A 290 RVIVTEIDPI------------CALQATMEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIG 352 (488)
T ss_dssp EEEEECSCHH------------HHHHHHHTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESS
T ss_pred EEEEEcCCHH------------HHHHHHHhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcC
Confidence 6888887421 11111 111112467777765 99999988888899999999885 788999999
Q ss_pred CCCCCCCCCHHHHhcc
Q 010990 352 NPTSQSECTAEEAYTW 367 (496)
Q Consensus 352 NPt~~~E~~peda~~~ 367 (496)
++. .|+..++.-.|
T Consensus 353 ~~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 353 HFD--NEIDMLGLETH 366 (488)
T ss_dssp STT--TTBTHHHHHTS
T ss_pred CCC--cccchHHHHHh
Confidence 985 78888776555
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.66 E-value=0.00055 Score=70.28 Aligned_cols=225 Identities=15% Similarity=0.160 Sum_probs=123.2
Q ss_pred ccchHHHHhhcCCCCCceEEEEecCcccccCCCCCCc--cccchhhhHHHHhhhcCCCCCceeeEEeecCCC-----chh
Q 010990 71 EKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTN-----NEQ 143 (496)
Q Consensus 71 d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~~--gm~I~~GKl~Ly~~~gGi~P~~~lPi~LDvgTn-----n~~ 143 (496)
++..++++.+ .+.+|+|.++++...|+.|.... |..|+.++-.++ ++.| ++|.+.+- .++
T Consensus 19 ~P~~v~~L~~----~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~~ 85 (384)
T 1l7d_A 19 SPEVVKKLVG----LGFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGTD 85 (384)
T ss_dssp CHHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSCC
T ss_pred CHHHHHHHHh----CCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCHH
Confidence 3455666654 36899999999999999998765 788888776665 3444 67766542 111
Q ss_pred c---c-cCcccccccccCCChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCc-cHHHHHHHHcCCCceeecCCCchhHH
Q 010990 144 L---L-KDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANH-NAFELLAKYGTTHLVFNDDIQGTASV 218 (496)
Q Consensus 144 L---l-~DplYlG~r~~R~~g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~-~af~iL~~yr~~~~~FnDDiQGTa~V 218 (496)
. + ..-.+++.-|.-. +. +.++++.++ |- .++.+|-+... .+ ..+++|+ ...
T Consensus 86 ~i~~l~~~~~~i~~~~~~~-----~~---~~~~~~~~~-gi-~~~~~e~~~~~~~~--------~~l~~l~------~~a 141 (384)
T 1l7d_A 86 EVALIKEGAVLMCHLGALT-----NR---PVVEALTKR-KI-TAYAMELMPRISRA--------QSMDILS------SQS 141 (384)
T ss_dssp GGGGSCTTCEEEEECCGGG-----CH---HHHHHHHHT-TC-EEEEGGGCCCSGGG--------GGGCHHH------HHH
T ss_pred HHHhhccCCEEEEEecccC-----CH---HHHHHHHHC-CC-EEEEeccccccccc--------cccchhh------HHH
Confidence 1 1 1222333333211 11 122222221 11 22333222210 00 0111221 111
Q ss_pred HHH---HHHHHHHHhCC----------CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccC
Q 010990 219 VLA---GVVAALKLIGG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS 285 (496)
Q Consensus 219 ~LA---gll~Alr~~g~----------~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~ 285 (496)
.+| +++.+.+..++ .+...||+|+|+|.+|.+++..+... |. +++++|++.-
T Consensus 142 ~~ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~~~d~~~~--- 206 (384)
T 1l7d_A 142 NLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRL-----GA-------VVMATDVRAA--- 206 (384)
T ss_dssp HHHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCST---
T ss_pred HHHHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCCHH---
Confidence 222 55666666553 57889999999999999999887542 63 4899998632
Q ss_pred CCcCCCchhc-----------------hhhccccCC------CCCHHHHhcccCCcEEEEcc---C--CCCCCCHHHHHH
Q 010990 286 SRKDSLQHFK-----------------KPWAHEHEP------VNNLLDAVKVIKPTILIGSS---G--VGRTFTKEVIEA 337 (496)
Q Consensus 286 ~r~~~l~~~k-----------------~~~a~~~~~------~~~L~e~v~~vkptvLIG~S---~--~~g~Ft~evv~~ 337 (496)
|.+.+...- -.|++...+ ...+.+.++. .|++|.++ + .+.+++++.++.
T Consensus 207 -~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~ 283 (384)
T 1l7d_A 207 -TKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTK 283 (384)
T ss_dssp -THHHHHHTTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTT
T ss_pred -HHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhc
Confidence 100000000 011111000 0127777775 99999988 3 234689999999
Q ss_pred HHccCCCceEEecCCC
Q 010990 338 MASFNEKPLILALSNP 353 (496)
Q Consensus 338 M~~~~~rPIIFaLSNP 353 (496)
|. +..+|+-+|-+
T Consensus 284 mk---~g~vivdva~~ 296 (384)
T 1l7d_A 284 MK---PGSVIIDLAVE 296 (384)
T ss_dssp SC---TTCEEEETTGG
T ss_pred CC---CCCEEEEEecC
Confidence 95 67788888864
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.18 E-value=0.00032 Score=73.55 Aligned_cols=232 Identities=15% Similarity=0.165 Sum_probs=124.8
Q ss_pred cchHHHHhhcCCCCCceEEEEecCcccccCCCCCCccccchhhhHHHHhhhcC-CCCCcee---eEEeecCCCc----hh
Q 010990 72 KGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGG-IRPSACL---PITVDVGTNN----EQ 143 (496)
Q Consensus 72 ~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~~gm~I~~GKl~Ly~~~gG-i~P~~~l---Pi~LDvgTnn----~~ 143 (496)
++.+.++++ .+.+|.|=+..+.=-|+-| .-|...|. |+++.++ .|+|.|.--. +.
T Consensus 45 P~~v~~L~~----~G~~V~VE~gaG~~~~f~D-------------~~Y~~aGa~i~~~~~~~~adiIlkVk~p~~~e~~~ 107 (405)
T 4dio_A 45 VESVKKLKS----LGFDVVVEAGAGLGSRIPD-------------QEYEKAGARVGTAADAKTADVILKVRRPSAQEISG 107 (405)
T ss_dssp HHHHHHHHH----TTCEEEEETTTTGGGTCCH-------------HHHHHTTCEEECGGGGGGCSEEEEEECCCTTTGGG
T ss_pred HHHHHHHHh----CCCEEEEeCCCCccCCCCH-------------HHHHHcCCEEchHHhhccCCEEEEeCCCChhHHhh
Confidence 345555554 3567877666443334444 22433332 3322222 4777766322 33
Q ss_pred cccCcccccccccCCChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCcc---HHHHHHHHcCCCceeecCCCchhHHHH
Q 010990 144 LLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN---AFELLAKYGTTHLVFNDDIQGTASVVL 220 (496)
Q Consensus 144 Ll~DplYlG~r~~R~~g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~---af~iL~~yr~~~~~FnDDiQGTa~V~L 220 (496)
|..+-.++|+-|+--. . +.++++.++ .-.+|-+|-+...+ .+.+|.... .+-|-.
T Consensus 108 l~~g~~l~~~lh~~~~----~----~l~~~l~~~--~it~ia~E~i~r~~ra~~l~~ls~~s--------~iAGy~---- 165 (405)
T 4dio_A 108 YRSGAVVIAIMDPYGN----E----EAISAMAGA--GLTTFAMELMPRITRAQSMDVLSSQA--------NLAGYQ---- 165 (405)
T ss_dssp SCTTCEEEEECCCTTC----H----HHHHHHHHT--TCEEEEGGGSCCSGGGGGGCHHHHHH--------HHHHHH----
T ss_pred cCCCcEEEEEeccccC----H----HHHHHHHHC--CCeEEEeeccccccccCccceecchh--------HHHHHH----
Confidence 5666777777777531 1 233333332 33456667665322 222333211 111222
Q ss_pred HHHHHHHHHhCC----------CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcC-
Q 010990 221 AGVVAALKLIGG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD- 289 (496)
Q Consensus 221 Agll~Alr~~g~----------~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~- 289 (496)
|.+++| ...++ .+...||+|+|+|.+|..+|+.+... |. +++++|++.-..+...+
T Consensus 166 Av~~aa-~~l~~~~~~l~t~~g~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~~ 232 (405)
T 4dio_A 166 AVIDAA-YEYDRALPMMMTAAGTVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVASL 232 (405)
T ss_dssp HHHHHH-HHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHHT
T ss_pred HHHHHH-HHhHhhhchhhccCCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHHc
Confidence 222333 33332 36789999999999999999988653 63 68999997532111000
Q ss_pred CCc------------hhchhhccccCC------CCCHHHHhcccCCcEEEEccC-----CCCCCCHHHHHHHHccCCCce
Q 010990 290 SLQ------------HFKKPWAHEHEP------VNNLLDAVKVIKPTILIGSSG-----VGRTFTKEVIEAMASFNEKPL 346 (496)
Q Consensus 290 ~l~------------~~k~~~a~~~~~------~~~L~e~v~~vkptvLIG~S~-----~~g~Ft~evv~~M~~~~~rPI 346 (496)
... +-+..|+++..+ ..+|.|+++. .|++|++.. .+.+||+++++.|. +..+
T Consensus 233 G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsV 307 (405)
T 4dio_A 233 GAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSV 307 (405)
T ss_dssp TCEECCCCC-----------------CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCE
T ss_pred CCceeecccccccccccccchhhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCE
Confidence 000 001124432111 1478999987 999999843 34579999999996 7899
Q ss_pred EEecCC-CCCCCCCC
Q 010990 347 ILALSN-PTSQSECT 360 (496)
Q Consensus 347 IFaLSN-Pt~~~E~~ 360 (496)
|+-+|- |-...|.+
T Consensus 308 IVDvA~d~GG~~e~t 322 (405)
T 4dio_A 308 VVDLAVERGGNIEGA 322 (405)
T ss_dssp EEETTGGGTCSBTTC
T ss_pred EEEEeCCCCCCcccc
Confidence 999985 33345554
No 15
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=96.92 E-value=0.043 Score=58.30 Aligned_cols=190 Identities=16% Similarity=0.171 Sum_probs=128.8
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCccH--HHHHHHHc---CCCc-ee----------ecCCCchhHHHHH
Q 010990 158 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYG---TTHL-VF----------NDDIQGTASVVLA 221 (496)
Q Consensus 158 ~~g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~a--f~iL~~yr---~~~~-~F----------nDDiQGTa~V~LA 221 (496)
.+..|...|-..|+..+.+-.||..=|-=+|++..-. --+.++|+ ...+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 3566777777889999988889998888999986432 12455654 2221 11 1122346666677
Q ss_pred HHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchh----
Q 010990 222 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP---- 297 (496)
Q Consensus 222 gll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~---- 297 (496)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|++.. .++..+..
T Consensus 225 ~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~ 291 (456)
T 3r3j_A 225 FAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMD 291 (456)
T ss_dssp HHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHH
Confidence 7788888889999999999999999999999998764 64 3345899999998753 45433221
Q ss_pred -----------hccccCCCC--CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CCCCCCCCHHH
Q 010990 298 -----------WAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEE 363 (496)
Q Consensus 298 -----------~a~~~~~~~--~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN-Pt~~~E~~ped 363 (496)
|+...+... +-.+ +=.++.||||=+.. ++.+|++-++.+-+ ++-+||.--+| |++ +| +++
T Consensus 292 ~k~~~~~~v~~~~~~~~~a~~v~~~~-i~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~T-~e--A~~ 365 (456)
T 3r3j_A 292 IKNNQRLRLKEYLKYSKTAKYFENQK-PWNIPCDIAFPCAT-QNEINENDADLFIQ-NKCKMIVEGANMPTH-IK--ALH 365 (456)
T ss_dssp HHHTSCCCGGGGGGTCSSCEEECSCC-GGGSCCSEEEECSC-TTCBCHHHHHHHHH-HTCCEEECCSSSCBC-TT--HHH
T ss_pred HHHhcCcchhhhhhcCCCceEeCCcc-ccccCccEEEeCCC-ccchhhHHHHHHHh-cCCeEEEecCCCCCC-HH--HHH
Confidence 111001000 0112 23468999998887 57999999999843 25789999999 763 55 556
Q ss_pred Hhc
Q 010990 364 AYT 366 (496)
Q Consensus 364 a~~ 366 (496)
.++
T Consensus 366 iL~ 368 (456)
T 3r3j_A 366 KLK 368 (456)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 16
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.92 E-value=0.043 Score=58.21 Aligned_cols=182 Identities=16% Similarity=0.125 Sum_probs=126.1
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCccH-----HHHHHHHcCC-Ccee----------ecCCCchhHHHHH
Q 010990 158 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA-----FELLAKYGTT-HLVF----------NDDIQGTASVVLA 221 (496)
Q Consensus 158 ~~g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~a-----f~iL~~yr~~-~~~F----------nDDiQGTa~V~LA 221 (496)
.+..|-..|...|++.+.+..||+.=|--.|++..-. +...++++.. -.|| .+.-.-||-=+.-
T Consensus 141 ~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~~ 220 (450)
T 4fcc_A 141 KSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVY 220 (450)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHHH
Confidence 4667778889999999999999999999999975432 2223333332 2233 2333447777778
Q ss_pred HHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc
Q 010990 222 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE 301 (496)
Q Consensus 222 gll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~ 301 (496)
++-.+++..+.+|+..||+|-|.|..|...|+.|.+. |. +=+-+-|++|-|++.. .++..+.....+
T Consensus 221 ~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~e 287 (450)
T 4fcc_A 221 FTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARLIE 287 (450)
T ss_dssp HHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHHHH
Confidence 8889999999999999999999999999999999763 64 4567789999998753 455433222111
Q ss_pred --cCCCCCHHH-------------HhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010990 302 --HEPVNNLLD-------------AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 354 (496)
Q Consensus 302 --~~~~~~L~e-------------~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN-Pt 354 (496)
....+.+.+ .+-.+++|||+=+..+ +.+|++-++.+.+ +...+|.-=+| |+
T Consensus 288 ~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~L~a-~g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 288 IKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ-NELDVDAAHQLIA-NGVKAVAEGANMPT 354 (450)
T ss_dssp HHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT-TCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HhcccCCccccccccCCcEEecCcccccCCccEEeecccc-ccccHHHHHHHHh-cCceEEecCCCCCC
Confidence 001111211 1234689999988875 6999999999853 23457877778 65
No 17
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.73 E-value=0.021 Score=60.17 Aligned_cols=178 Identities=19% Similarity=0.179 Sum_probs=126.0
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCcc-HHH-HHHHHcC---C--Ccee----------ecCCCchhHHHH
Q 010990 158 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN-AFE-LLAKYGT---T--HLVF----------NDDIQGTASVVL 220 (496)
Q Consensus 158 ~~g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~-af~-iL~~yr~---~--~~~F----------nDDiQGTa~V~L 220 (496)
.+..|-..|...|++++.+.-||+.-|-=+|++..- -.. +.+.|+. . -.++ .+--.-||-=+.
T Consensus 126 ~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~ 205 (424)
T 3k92_A 126 MSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVT 205 (424)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHH
Confidence 355666778899999999988998888888987632 222 4567742 1 1122 233455888888
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhc-hhhc
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWA 299 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k-~~~a 299 (496)
.++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+.+.|++|-|++.. .++... +.+.
T Consensus 206 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~--GlD~~~l~~~~ 272 (424)
T 3k92_A 206 ICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD--GLDIPYLLDKR 272 (424)
T ss_dssp HHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT--CCCHHHHHHHC
T ss_pred HHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHH
Confidence 88899999999999999999999999999999999764 64 4467999999999754 454322 1222
Q ss_pred cccC-------CCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010990 300 HEHE-------PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 354 (496)
Q Consensus 300 ~~~~-------~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN-Pt 354 (496)
+... ..-+-.+. -.++.||||=+..+ +..|++-++.+ +-.+|.--+| |+
T Consensus 273 ~~~g~i~~~~a~~~~~~~i-~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 273 DSFGMVTNLFTDVITNEEL-LEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp CSSSCCGGGCSCCBCHHHH-HHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHhCCCCCCCcEEecCccc-eeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 1111 01122333 35689999988775 68999888776 6788988888 65
No 18
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.71 E-value=0.0015 Score=68.00 Aligned_cols=104 Identities=22% Similarity=0.197 Sum_probs=67.3
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcC------CCc---hhchhhcccc--
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD------SLQ---HFKKPWAHEH-- 302 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~------~l~---~~k~~~a~~~-- 302 (496)
+...|++|+|+|.+|..+|+.+... |. +++++|++.-..+.-.+ .++ .-...|++..
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~ 249 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSE 249 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhH
Confidence 5789999999999999999988654 63 58999987421100000 000 0001122110
Q ss_pred ----CCCCCHHHHhcccCCcEEEEccCC-----CCCCCHHHHHHHHccCCCceEEecCCCC
Q 010990 303 ----EPVNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 303 ----~~~~~L~e~v~~vkptvLIG~S~~-----~g~Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
....+|.++++. .|++|++... +.++|+++++.|. +..+|+-+|=+.
T Consensus 250 ~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d~ 305 (381)
T 3p2y_A 250 AERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGET 305 (381)
T ss_dssp HHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred HHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCCC
Confidence 012468889987 9999997432 3579999999996 788999998654
No 19
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.65 E-value=0.012 Score=61.97 Aligned_cols=186 Identities=15% Similarity=0.135 Sum_probs=127.2
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCccH--HHHHHHHcC---C--Ccee----------ecCCCchhHHHH
Q 010990 158 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---T--HLVF----------NDDIQGTASVVL 220 (496)
Q Consensus 158 ~~g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~a--f~iL~~yr~---~--~~~F----------nDDiQGTa~V~L 220 (496)
.+..|-..|...|++++.+.-||..-|-=+|++..-. --+.++|+. . -.++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 3556677788999999999989999999999987532 234566631 1 1222 233344666666
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEcCCCcccCCCcCCCchhch-hh
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFKK-PW 298 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~-~vD~~GLi~~~r~~~l~~~k~-~~ 298 (496)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +++ +.|++|-|++.. .++..+. .+
T Consensus 203 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~-----~Ga-------kVVavsD~~G~i~dp~--Gld~~~l~~~ 268 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAER-----LGM-------RVVAVATSMGGMYAPE--GLDVAEVLSA 268 (419)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEEETTEEEECTT--CCCHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEEcCCCeEECCC--CCCHHHHHHH
Confidence 7788888999999999999999999999999998865 363 455 999999999764 3443221 22
Q ss_pred ccccCCCC----CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CCCCCCCCHHHHhc
Q 010990 299 AHEHEPVN----NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAYT 366 (496)
Q Consensus 299 a~~~~~~~----~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN-Pt~~~E~~peda~~ 366 (496)
.+...... +-.+ +-.++.|||+=++. ++.+|++-.+.+ +-.||.--+| |++ +| +++.++
T Consensus 269 ~~~~g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~t-~~--A~~~L~ 332 (419)
T 3aoe_E 269 YEATGSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGLN-PE--AEAYLL 332 (419)
T ss_dssp HHHHSSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCBC-HH--HHHHHH
T ss_pred HHhhCCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcCC-HH--HHHHHH
Confidence 21111000 0012 34478999998876 669999888877 5679999999 663 44 445544
No 20
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.64 E-value=0.011 Score=58.05 Aligned_cols=132 Identities=15% Similarity=0.171 Sum_probs=85.5
Q ss_pred CCceeecC------CCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEE
Q 010990 204 THLVFNDD------IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLV 277 (496)
Q Consensus 204 ~~~~FnDD------iQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~v 277 (496)
.+.++|-. .-.+-+|+=.++..++...+..+.+.+++|+|+|..|..+|+.+... |. +++.+
T Consensus 117 gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~ 184 (293)
T 3d4o_A 117 NRTLVKLMERDDIAIYNSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAAL-----GA-------KVKVG 184 (293)
T ss_dssp TCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEE
T ss_pred CCeEEEecCCceeeeeccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhC-----CC-------EEEEE
Confidence 56666633 22344555556666667778899999999999999999999988642 53 58888
Q ss_pred cCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecC-CCCCC
Q 010990 278 DSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS-NPTSQ 356 (496)
Q Consensus 278 D~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLS-NPt~~ 356 (496)
|+.. .+ ....+ .+--......+|.+.++. .|++|-.. +.+.++++.++.|. +..+++=+| +|.
T Consensus 185 dr~~----~~---~~~~~-~~g~~~~~~~~l~~~l~~--aDvVi~~~-p~~~i~~~~l~~mk---~~~~lin~ar~~~-- 248 (293)
T 3d4o_A 185 ARES----DL---LARIA-EMGMEPFHISKAAQELRD--VDVCINTI-PALVVTANVLAEMP---SHTFVIDLASKPG-- 248 (293)
T ss_dssp ESSH----HH---HHHHH-HTTSEEEEGGGHHHHTTT--CSEEEECC-SSCCBCHHHHHHSC---TTCEEEECSSTTC--
T ss_pred ECCH----HH---HHHHH-HCCCeecChhhHHHHhcC--CCEEEECC-ChHHhCHHHHHhcC---CCCEEEEecCCCC--
Confidence 8752 10 10000 110000011467788875 99999765 45799999999885 567888888 453
Q ss_pred CCCCHHHH
Q 010990 357 SECTAEEA 364 (496)
Q Consensus 357 ~E~~peda 364 (496)
++..+.+
T Consensus 249 -~~~~~~a 255 (293)
T 3d4o_A 249 -GTDFRYA 255 (293)
T ss_dssp -SBCHHHH
T ss_pred -CCCHHHH
Confidence 4445444
No 21
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.38 E-value=0.024 Score=56.81 Aligned_cols=84 Identities=19% Similarity=0.257 Sum_probs=69.1
Q ss_pred hhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch
Q 010990 215 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 293 (496)
Q Consensus 215 Ta~V~LAgll~Alr~~g~~l~d~riv~~GAG~-Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~ 293 (496)
-.-+|-.|++..++-.+.+|+..++|++|+|. .|..+|.+|... |. .+++++|+
T Consensus 140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~------------- 194 (285)
T 3l07_A 140 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF------------- 194 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34478889999999999999999999999987 799999998652 53 47777653
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHH
Q 010990 294 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIE 336 (496)
Q Consensus 294 ~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~ 336 (496)
..+|.+.++. +|++|...+.++.+++|+++
T Consensus 195 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 224 (285)
T 3l07_A 195 -----------TTDLKSHTTK--ADILIVAVGKPNFITADMVK 224 (285)
T ss_dssp -----------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC
T ss_pred -----------chhHHHhccc--CCEEEECCCCCCCCCHHHcC
Confidence 1358888987 99999999999889988874
No 22
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.15 E-value=0.011 Score=59.67 Aligned_cols=96 Identities=17% Similarity=0.231 Sum_probs=77.7
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCc
Q 010990 214 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 292 (496)
Q Consensus 214 GTa~V~LAgll~Alr~~g~~l~d~riv~~GAG-~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~ 292 (496)
+-.-+|-.|++-.++-.+.+++..++||+|+| ..|.-+|.+|... | .++++++|+
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 44567888999999999999999999999999 4799999888652 4 358888753
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCC
Q 010990 293 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 353 (496)
Q Consensus 293 ~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNP 353 (496)
..+|.+.++. +|++|+..+.++.+++++|+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 1458888987 99999999999999999875 45566666654
No 23
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=96.08 E-value=0.095 Score=55.89 Aligned_cols=178 Identities=15% Similarity=0.166 Sum_probs=120.9
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCccH--HHHHHHHcC---C-Ccee----------ecCCCchhHHHHHH
Q 010990 159 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---T-HLVF----------NDDIQGTASVVLAG 222 (496)
Q Consensus 159 ~g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~a--f~iL~~yr~---~-~~~F----------nDDiQGTa~V~LAg 222 (496)
+..|...|-..|++.+.+..||..=|-=+|++..-. --+.++|+. . -.|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 455666777789999998889998888899987422 123556542 1 1111 11223466666667
Q ss_pred HHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEcCCCcccCCCcCCCchhc------
Q 010990 223 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFK------ 295 (496)
Q Consensus 223 ll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~-~vD~~GLi~~~r~~~l~~~k------ 295 (496)
+-.+++..|.+|+..||+|.|.|..|...|+.|.+. |. +++ +.|++|-|++.. .++...
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~--Gid~edl~~l~~ 304 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN--GFTHENLEFLID 304 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS--CCCHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC--CCCHHHHHHHHH
Confidence 788888889999999999999999999999998653 64 455 899999888753 453321
Q ss_pred ---------hhhcccc---CCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010990 296 ---------KPWAHEH---EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 354 (496)
Q Consensus 296 ---------~~~a~~~---~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN-Pt 354 (496)
..|+... ....+ .+.. .+++||||=+.. ++..|++-+..+-+ |+-.+|.--+| |+
T Consensus 305 ~k~~~~g~v~~~~~~~~~a~~v~~-~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 305 LKEEKKGRIKEYLNHSSTAKYFPN-EKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp HHTTTTCCGGGGGGTCSSCEECSS-CCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhcCCcHHHHHhhcCCcEEecC-cCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 1222100 00110 1223 468999998886 66999999999854 46779999999 65
No 24
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.05 E-value=0.04 Score=55.24 Aligned_cols=93 Identities=16% Similarity=0.259 Sum_probs=74.4
Q ss_pred hhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch
Q 010990 215 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 293 (496)
Q Consensus 215 Ta~V~LAgll~Alr~~g~~l~d~riv~~GAG~-Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~ 293 (496)
-.-+|-.|++..++-.+.+|+..++|++|+|. .|..+|.+|... |. .+++++|+
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 45578889999999999999999999999876 799999998752 53 48888753
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecC
Q 010990 294 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 294 ~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLS 351 (496)
..+|.+.++. +|++|...+.++.++.++++ +.-+|+=++
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVg 232 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDVG 232 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEECC
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEec
Confidence 1358888887 99999999999999998874 344555553
No 25
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.01 E-value=0.059 Score=56.66 Aligned_cols=179 Identities=14% Similarity=0.170 Sum_probs=110.2
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCccH--HHHHHHHc---CCC---cee----------ecCCCchhHHH
Q 010990 158 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYG---TTH---LVF----------NDDIQGTASVV 219 (496)
Q Consensus 158 ~~g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~a--f~iL~~yr---~~~---~~F----------nDDiQGTa~V~ 219 (496)
.+..|-..|...|++++.+.-||..-|-=+|++..-. --+.++|+ ... .++ .+.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 3455667788999999999999999999999997522 23466664 211 222 22223466666
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC-----CcccCCCcCCCchh
Q 010990 220 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK-----GLIVSSRKDSLQHF 294 (496)
Q Consensus 220 LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~-----GLi~~~r~~~l~~~ 294 (496)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +=+-+.|++ |-|++.. .++..
T Consensus 196 ~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~-----~Ga------kvVavsD~~~~~~~G~i~d~~--Gld~~ 262 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIER-----QGG------KVCAIAEWDRNEGNYALYNEN--GIDFK 262 (421)
T ss_dssp HHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHH-----TTC------CEEECCBCCSSSCSBCCBCSS--CCCHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC------EEEEEEecCCCccceEEECCC--CCCHH
Confidence 66778888889999999999999999999999998875 364 334489999 9999764 34432
Q ss_pred ch-hhccccCCCCCH-------HHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010990 295 KK-PWAHEHEPVNNL-------LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 354 (496)
Q Consensus 295 k~-~~a~~~~~~~~L-------~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN-Pt 354 (496)
.. .+.+.......+ .+.+-.+++||||=++. ++..|++-...+ ...+|.-=+| |+
T Consensus 263 ~l~~~~~~~g~i~~~~~a~~i~~~~~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 263 ELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHHCC---------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred HHHHHHHhcCCcccCCCceEeCccchhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 21 111111100000 01123356777776654 456776666655 4556666666 54
No 26
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.91 E-value=0.12 Score=54.77 Aligned_cols=178 Identities=17% Similarity=0.168 Sum_probs=120.8
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCcc--HHHHHHHHcC---C--Ccee----------ecCCCchhHHHH
Q 010990 158 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYGT---T--HLVF----------NDDIQGTASVVL 220 (496)
Q Consensus 158 ~~g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~--af~iL~~yr~---~--~~~F----------nDDiQGTa~V~L 220 (496)
.+..|-..|...|++++.+.-||..-|-=+|++..- ---+.++|+. . -.++ .+.-.-||-=+.
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~ 219 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVF 219 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHH
Confidence 345666778899999999999998888889998741 1224566631 1 1222 233344666666
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhch-hhc
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA 299 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~-~~a 299 (496)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++|-|++.. .++..+. .+.
T Consensus 220 ~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----Ga------kvVavsD~~G~i~dp~--Gld~~~l~~~~ 286 (440)
T 3aog_A 220 ITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----GA------RVVAVQDHTGTVYNEA--GIDPYDLLRHV 286 (440)
T ss_dssp HHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----CC------EEEEEEcCCcEEECCC--CCCHHHHHHHH
Confidence 67788888899999999999999999999999988763 53 2344999999998764 3433221 111
Q ss_pred cccCCC--------CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010990 300 HEHEPV--------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 354 (496)
Q Consensus 300 ~~~~~~--------~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN-Pt 354 (496)
...... -+-.+ +-.+++||||=++. ++..|.+-.+.+ +..+|.--+| |+
T Consensus 287 ~~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~ 344 (440)
T 3aog_A 287 QEFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPT 344 (440)
T ss_dssp HHTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HhcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCcccc
Confidence 111100 12234 34578999998766 568888877776 5678888888 65
No 27
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.89 E-value=0.016 Score=57.55 Aligned_cols=88 Identities=15% Similarity=0.199 Sum_probs=59.7
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc
Q 010990 220 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 299 (496)
Q Consensus 220 LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a 299 (496)
-.|++.+++-.+.++++.+++|+|||.+|.+++..|.. .|. ++|+++|+. ..+ .....+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 35788889888889999999999999887777777654 365 679988874 111 112222222
Q ss_pred cc-------cCCCCCHHHHhcccCCcEEEEccCCC
Q 010990 300 HE-------HEPVNNLLDAVKVIKPTILIGSSGVG 327 (496)
Q Consensus 300 ~~-------~~~~~~L~e~v~~vkptvLIG~S~~~ 327 (496)
.. .....+|.++++. +|++|-++..+
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1112478888886 99999877654
No 28
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.65 E-value=0.024 Score=56.55 Aligned_cols=82 Identities=11% Similarity=0.213 Sum_probs=67.6
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCc
Q 010990 214 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 292 (496)
Q Consensus 214 GTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~-Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~ 292 (496)
+-.-+|-.|++..++-.+ |+..++|++|+|. .|..+|.+|... |. .+++++|+
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~------------ 183 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK------------ 183 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 444578889999999998 9999999999985 899999998752 53 58888753
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHH
Q 010990 293 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVI 335 (496)
Q Consensus 293 ~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv 335 (496)
..+|.+.++. +|++|...+.++.++++++
T Consensus 184 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~v 212 (276)
T 3ngx_A 184 ------------TKDIGSMTRS--SKIVVVAVGRPGFLNREMV 212 (276)
T ss_dssp ------------CSCHHHHHHH--SSEEEECSSCTTCBCGGGC
T ss_pred ------------cccHHHhhcc--CCEEEECCCCCccccHhhc
Confidence 1458889988 9999999998888888876
No 29
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.62 E-value=0.027 Score=56.45 Aligned_cols=96 Identities=18% Similarity=0.264 Sum_probs=74.5
Q ss_pred hhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch
Q 010990 215 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 293 (496)
Q Consensus 215 Ta~V~LAgll~Alr~~g~~l~d~riv~~GAG~-Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~ 293 (496)
-.-+|-.|++..|+-.+.+|+..++|++|+|. .|..+|.+|... |. .+++++|+
T Consensus 140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~------------- 194 (286)
T 4a5o_A 140 LRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF------------- 194 (286)
T ss_dssp SCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34478889999999999999999999999875 899999998652 53 57777652
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecC-CCC
Q 010990 294 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS-NPT 354 (496)
Q Consensus 294 ~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLS-NPt 354 (496)
..+|.+.++. +|++|+..+.++.++.|+++ +.-+|+=++ ||.
T Consensus 195 -----------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~ 237 (286)
T 4a5o_A 195 -----------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK------EGAIVIDVGINRQ 237 (286)
T ss_dssp -----------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCSCSS
T ss_pred -----------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC------CCeEEEEeccccc
Confidence 1358888887 99999999999889998874 344555543 443
No 30
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.58 E-value=0.081 Score=51.72 Aligned_cols=98 Identities=16% Similarity=0.256 Sum_probs=65.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 315 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 315 (496)
..||.|+|+|..|.++|..|... |.. ..+++++|++ . +.+...++.| ......++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~---~~~~~l~~~~--gi~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----L---DKLDFFKEKC--GVHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----S---HHHHHHHHTT--CCEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----H---HHHHHHHHHc--CCEEeCChHHHHhc-
Confidence 46899999999999999988763 653 2478988874 1 1122222221 01112578899986
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcc--CCCceEEecCCCCC
Q 010990 316 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNPTS 355 (496)
Q Consensus 316 kptvLIG~S~~~g~Ft~evv~~M~~~--~~rPIIFaLSNPt~ 355 (496)
+|++| ++..+ -..+++++.+..+ .++.+|...++..+
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~ 102 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT 102 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC
Confidence 88877 44444 4568888888764 45668888888774
No 31
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=95.55 E-value=0.08 Score=55.69 Aligned_cols=175 Identities=19% Similarity=0.171 Sum_probs=116.2
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCccHHH---HHHHHcC---C--CceeecC----------CCchhHHHH
Q 010990 159 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYGT---T--HLVFNDD----------IQGTASVVL 220 (496)
Q Consensus 159 ~g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~af~---iL~~yr~---~--~~~FnDD----------iQGTa~V~L 220 (496)
+.+|-..|...|++++.+.-||..-|-=+|++.. ... +.+.|+. . ..++.-+ -.-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 4556677889999999999999999999999973 222 2455531 1 1222222 123555555
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEcCCCcccCCCcCCCchhc-hhh
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFK-KPW 298 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~-~vD~~GLi~~~r~~~l~~~k-~~~ 298 (496)
-++-.+++..|.+|+..||+|.|.|..|...|++|.+ .|. +++ +.|++|-|++.. .++... +.+
T Consensus 195 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~Ga-------kVVavsD~~G~i~dp~--GlD~~~l~~~ 260 (421)
T 1v9l_A 195 VATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MGA-------KVIAVSDINGVAYRKE--GLNVELIQKN 260 (421)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSSCEEECTT--CCCTHHHHHT
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEECCCcEEECCC--CCCHHHHHHH
Confidence 5677788889999999999999999999999988864 354 455 999999998754 232211 111
Q ss_pred ccc--c------------CCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010990 299 AHE--H------------EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 354 (496)
Q Consensus 299 a~~--~------------~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN-Pt 354 (496)
... . ....+-.| +-.++.|+|+=+.. ++.+|++-.+.+ +-.||.--+| |+
T Consensus 261 k~~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~ 325 (421)
T 1v9l_A 261 KGLTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPT 325 (421)
T ss_dssp TTSCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCB
T ss_pred HHhhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcC
Confidence 111 0 11101123 33468999997775 668888777766 5678888888 65
No 32
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.42 E-value=0.027 Score=56.54 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=76.2
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCc
Q 010990 214 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 292 (496)
Q Consensus 214 GTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~-Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~ 292 (496)
+-.-+|-.|++-.++-.+.+++..++|++|+|. .|.-+|.+|... | .++++++|+
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC------------
Confidence 455678889999999999999999999999995 699999888642 4 368888643
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCC
Q 010990 293 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 353 (496)
Q Consensus 293 ~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNP 353 (496)
..+|.+.++. +|++|+..+.++.+++++|+ +.-+|+=++-|
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGIN 233 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCE
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCC
Confidence 0458888987 99999999999999988874 34466555544
No 33
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.31 E-value=0.034 Score=56.14 Aligned_cols=96 Identities=24% Similarity=0.313 Sum_probs=74.9
Q ss_pred CCchhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCC
Q 010990 212 IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 290 (496)
Q Consensus 212 iQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~-Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~ 290 (496)
..|-.-+|-.|++..|+-.+.+|+..++|++|+|. .|..+|.+|... |. .+++++++ .
T Consensus 141 ~~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~--------T- 199 (300)
T 4a26_A 141 EPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG--------T- 199 (300)
T ss_dssp CCSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT--------S-
T ss_pred cCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC--------C-
Confidence 34445688889999999999999999999999876 899999998752 53 58888762 1
Q ss_pred CchhchhhccccCCCCCHH--HHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecC
Q 010990 291 LQHFKKPWAHEHEPVNNLL--DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 291 l~~~k~~~a~~~~~~~~L~--e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLS 351 (496)
.+|. +.++. +|++|...+.++.++.++++ +.-+|+=++
T Consensus 200 ---------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 200 ---------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp ---------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred ---------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 1344 88887 99999999999899998873 344665553
No 34
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.20 E-value=0.039 Score=56.06 Aligned_cols=113 Identities=19% Similarity=0.259 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHH---------hCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCC
Q 010990 217 SVVLAGVVAALKL---------IGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS 286 (496)
Q Consensus 217 ~V~LAgll~Alr~---------~g~~l~d~riv~~GAG~-Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~ 286 (496)
-+|-.|.+-.++- .|.++...++||+|+|. .|.-+|.+|... | .+++++|++..-...
T Consensus 149 PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~~ 216 (320)
T 1edz_A 149 PCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKFT 216 (320)
T ss_dssp CHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEEE
T ss_pred CCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHHh
Confidence 3444555666666 68899999999999996 598888888642 4 359999998665555
Q ss_pred CcCCCchhchhhccccCC---C--CCHHHHhcccCCcEEEEccCCCCC-CCHHHHHHHHccCCCceEEecCCC
Q 010990 287 RKDSLQHFKKPWAHEHEP---V--NNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFNEKPLILALSNP 353 (496)
Q Consensus 287 r~~~l~~~k~~~a~~~~~---~--~~L~e~v~~vkptvLIG~S~~~g~-Ft~evv~~M~~~~~rPIIFaLSNP 353 (496)
|...+... ++.... . .+|.+.++. +|++|+..+.++. +++++|+ +.-+|+-++-|
T Consensus 217 ra~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~ 277 (320)
T 1edz_A 217 RGESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACT 277 (320)
T ss_dssp SCCCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSS
T ss_pred HHHHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCC
Confidence 54333311 111100 1 469999998 9999999998886 8888873 23455555555
No 35
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.10 E-value=0.023 Score=56.25 Aligned_cols=86 Identities=22% Similarity=0.246 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc
Q 010990 220 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 299 (496)
Q Consensus 220 LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a 299 (496)
-.|++.+++-.+.++++.+++|+|||.+|-+++..|.. .|. +++++++++ ..+.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 34667788888889999999999999888888877764 365 578988885 222222211 111
Q ss_pred cccCCCCCHHHHhcccCCcEEEEccCCC
Q 010990 300 HEHEPVNNLLDAVKVIKPTILIGSSGVG 327 (496)
Q Consensus 300 ~~~~~~~~L~e~v~~vkptvLIG~S~~~ 327 (496)
. ....++.++++. +|++|-++..+
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~G 186 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPAG 186 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC--
T ss_pred c--ccHhhHHHHhcC--CCEEEECccCC
Confidence 0 012345666665 99999766543
No 36
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.03 E-value=0.094 Score=53.91 Aligned_cols=172 Identities=17% Similarity=0.187 Sum_probs=109.9
Q ss_pred hhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCccH--HHHHHHHcC---CCcee---ecCCCchhHHHHHHHHHHHHHhCC
Q 010990 161 QEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---THLVF---NDDIQGTASVVLAGVVAALKLIGG 232 (496)
Q Consensus 161 ~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~a--f~iL~~yr~---~~~~F---nDDiQGTa~V~LAgll~Alr~~g~ 232 (496)
.+-++++..|.+++.+..|+ -|-=+|++..-. --+.++|+. +-..+ .|--.-||-=+.-++-.+++..|.
T Consensus 93 ~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~ 170 (355)
T 1c1d_A 93 STWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRGL 170 (355)
T ss_dssp HHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcCC
Confidence 45567788888888887765 466799976322 224566652 11111 111123555556677788888898
Q ss_pred -CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccC-CCCCHHH
Q 010990 233 -TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE-PVNNLLD 310 (496)
Q Consensus 233 -~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~-~~~~L~e 310 (496)
+|+..+++|.|.|..|..+|+.+.. .|. ++++.|++ .. +..+++... ..-++.+
T Consensus 171 ~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~--------~~~~a~~~ga~~v~~~e 226 (355)
T 1c1d_A 171 GSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TE--------RVAHAVALGHTAVALED 226 (355)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HH--------HHHHHHHTTCEECCGGG
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----cc--------HHHHHHhcCCEEeChHH
Confidence 8999999999999999999998754 364 57788874 11 122332211 1113445
Q ss_pred HhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CCCCCCCCHHHHhc
Q 010990 311 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAYT 366 (496)
Q Consensus 311 ~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN-Pt~~~E~~peda~~ 366 (496)
.++ ++.|+|+=++ ..+.+|++-++.| +..+|.=-+| |+..+|+ .++++
T Consensus 227 ll~-~~~DIliP~A-~~~~I~~~~~~~l----k~~iVie~AN~p~t~~eA--~~~L~ 275 (355)
T 1c1d_A 227 VLS-TPCDVFAPCA-MGGVITTEVARTL----DCSVVAGAANNVIADEAA--SDILH 275 (355)
T ss_dssp GGG-CCCSEEEECS-CSCCBCHHHHHHC----CCSEECCSCTTCBCSHHH--HHHHH
T ss_pred hhc-CccceecHhH-HHhhcCHHHHhhC----CCCEEEECCCCCCCCHHH--HHHHH
Confidence 443 5789999654 4679999999998 3578888888 6543343 34443
No 37
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=94.97 E-value=0.53 Score=49.38 Aligned_cols=178 Identities=18% Similarity=0.178 Sum_probs=117.5
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCcc--HHHHHHHHc---CC--Cceee----------cCCCchhHHHHH
Q 010990 159 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYG---TT--HLVFN----------DDIQGTASVVLA 221 (496)
Q Consensus 159 ~g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~--af~iL~~yr---~~--~~~Fn----------DDiQGTa~V~LA 221 (496)
+.+|-..|...|++++.+.-||..-|-=+|++..- ---+.+.|+ .. ..++- +.-.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 44566778889999999988998888889998752 112345552 11 12222 122335555566
Q ss_pred HHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhc-hhhcc
Q 010990 222 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWAH 300 (496)
Q Consensus 222 gll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k-~~~a~ 300 (496)
++-.+++..|.+++..||+|.|.|..|...|++|.+- .|. +=+-+.|++|-+++.. .++... +.+..
T Consensus 195 ~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e~----~Ga------kvVavsD~~G~i~dp~--Gld~~~l~~~~~ 262 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQE----LGS------KVVAVSDSRGGIYNPE--GFDVEELIRYKK 262 (415)
T ss_dssp HHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHT----TCC------EEEEEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHHh----cCC------EEEEEEeCCCeEECCC--CCCHHHHHHHHH
Confidence 7778888899999999999999999999999988650 254 3344899999998764 344321 12221
Q ss_pred ccCCC--------CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010990 301 EHEPV--------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 354 (496)
Q Consensus 301 ~~~~~--------~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN-Pt 354 (496)
..... -+-.| +-.+++|+||=+.. ++..|++-.+.+ .-.+|.--+| |+
T Consensus 263 ~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 263 EHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp HSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred hhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCccc
Confidence 11110 02233 44578999997776 567888777766 5668888887 65
No 38
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.96 E-value=0.14 Score=52.79 Aligned_cols=102 Identities=16% Similarity=0.312 Sum_probs=62.9
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHh
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 312 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v 312 (496)
++.+.+++|+|+|..|..++..+... |. ++|+++|+. ..| .....+.+--+.-...++.+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57889999999999999998888653 65 579988874 111 1111111210111124677777
Q ss_pred cccCCcEEEEccCCCC-CCCHHHHHH--HH-ccCCCceEEecCCCC
Q 010990 313 KVIKPTILIGSSGVGR-TFTKEVIEA--MA-SFNEKPLILALSNPT 354 (496)
Q Consensus 313 ~~vkptvLIG~S~~~g-~Ft~evv~~--M~-~~~~rPIIFaLSNPt 354 (496)
+. .|++|-+.+.+. .++++.++. |. +...+-+++-++.|.
T Consensus 226 ~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 AR--SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp HT--CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred cC--CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 64 999998766543 467788887 43 222344556666653
No 39
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.94 E-value=0.54 Score=49.83 Aligned_cols=178 Identities=17% Similarity=0.192 Sum_probs=118.0
Q ss_pred hhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCccHH--HHHHHHcC---C--Cceeec----------CCCchhHHHHHH
Q 010990 160 GQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYGT---T--HLVFND----------DIQGTASVVLAG 222 (496)
Q Consensus 160 g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~af--~iL~~yr~---~--~~~FnD----------DiQGTa~V~LAg 222 (496)
..|-..|-..|++.+.+..||..-|-=+|++..-.. -+.++|+. . .-++-. .-.-||-=+.-+
T Consensus 137 ~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~ 216 (449)
T 1bgv_A 137 DREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYY 216 (449)
T ss_dssp HHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHH
Confidence 456667777899999888999999999999876221 12344431 1 122211 123365555667
Q ss_pred HHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCC-chh-------
Q 010990 223 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL-QHF------- 294 (496)
Q Consensus 223 ll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l-~~~------- 294 (496)
+-.+++..|.+|+..||+|.|.|..|...|++|.+. |. +=+-+.|++|-|++.. .+ ++.
T Consensus 217 ~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~~ 283 (449)
T 1bgv_A 217 VEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYMLE 283 (449)
T ss_dssp HHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHHH
T ss_pred HHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHHH
Confidence 778888889999999999999999999999888664 54 3344799999988753 35 221
Q ss_pred -c-------hhhccc--cCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010990 295 -K-------KPWAHE--HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 354 (496)
Q Consensus 295 -k-------~~~a~~--~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN-Pt 354 (496)
| ..|+.. .+... -.+.. .++.|+|+=+.. ++..|++-.+.+.+ |...+|.-=+| |+
T Consensus 284 ~k~~~~g~v~~y~~~~~a~~i~-~~e~~-~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 284 MRASGRNKVQDYADKFGVQFFP-GEKPW-GQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHCCCCTHHHHHHHTCEEEE-TCCGG-GSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHhccCCChhhcccccCCEEeC-chhhh-cCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 1 111110 00000 01122 468999997775 66999999999853 34579988888 65
No 40
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.90 E-value=0.012 Score=51.29 Aligned_cols=70 Identities=16% Similarity=0.325 Sum_probs=42.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 315 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 315 (496)
..||+|+|+|..|..++..|.. .|. + ++++|++ ..+ .....+.+.-+.....++.++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~~a~~~~~~~~~~~~~~~~~~~- 80 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRAFAEKYEYEYVLINDIDSLIKN- 80 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHHHHHHHTCEEEECSCHHHHHHT-
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHHHHHHhCCceEeecCHHHHhcC-
Confidence 7799999999999888776643 243 4 8888874 111 111111221111124578888876
Q ss_pred CCcEEEEccCC
Q 010990 316 KPTILIGSSGV 326 (496)
Q Consensus 316 kptvLIG~S~~ 326 (496)
+|++|=+.+.
T Consensus 81 -~Divi~at~~ 90 (144)
T 3oj0_A 81 -NDVIITATSS 90 (144)
T ss_dssp -CSEEEECSCC
T ss_pred -CCEEEEeCCC
Confidence 8888866553
No 41
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.80 E-value=0.12 Score=55.16 Aligned_cols=123 Identities=15% Similarity=0.199 Sum_probs=87.0
Q ss_pred CCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCC
Q 010990 211 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 290 (496)
Q Consensus 211 DiQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~ 290 (496)
.+.|+......|+ .+.++..+...+++|+|.|..|.++|+.+... |. +++.+|++.. +.
T Consensus 235 ~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~~-- 293 (479)
T 1v8b_A 235 NVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----CA-- 293 (479)
T ss_dssp HHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----HH--
T ss_pred chHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----hH--
Confidence 3444444555552 25678899999999999999999999998653 64 6888887521 00
Q ss_pred CchhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhc
Q 010990 291 LQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 366 (496)
Q Consensus 291 l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~ 366 (496)
+ ......-...+|.|+++. .|++|.+....+.++++.++.|. +.-||.=.|.-. .|+.-++..+
T Consensus 294 ~-----~a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 294 I-----QAVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp H-----HHHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred H-----HHHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 0 011111112479999986 99999997777899999999985 567888888765 6777776655
No 42
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.72 E-value=0.15 Score=51.09 Aligned_cols=98 Identities=14% Similarity=0.292 Sum_probs=75.3
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCc
Q 010990 214 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 292 (496)
Q Consensus 214 GTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~-Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~ 292 (496)
+-.-+|-.|++-.++-.+.+++..++|++|+|. .|.-+|.+|.. .|. ...+++++|+
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 445577888999999999999999999999996 58888887753 210 1458887542
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCC
Q 010990 293 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 353 (496)
Q Consensus 293 ~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNP 353 (496)
..+|.+.++. +|++|+..+.++.+++|+++ +.-+|+=++-|
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 234 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVS 234 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCC
Confidence 0468888987 99999999999999999874 34577766655
No 43
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.68 E-value=0.075 Score=51.72 Aligned_cols=97 Identities=20% Similarity=0.267 Sum_probs=57.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchh-------hccc--------
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------WAHE-------- 301 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~-------~a~~-------- 301 (496)
.||.|+|+|..|.+||..+..+ |. +++++|++- . .+...+.. +.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~~~~~~~~g~~~~~~~ 65 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDINT----D---ALDAAKKRFEGLAAVYEKEVAGAADGA 65 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSH----H---HHHHHHHHHHHHHHHHHHHSTTCTTTH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCH----H---HHHHHHHHHHHHHHHHHHhcccCCHHH
Confidence 5899999999999999998753 64 688888751 1 11111111 1000
Q ss_pred -------cCCCCCHHHHhcccCCcEEEEccCCCC-CCCHHHHHHHHccCCCceEEecCCCCCC
Q 010990 302 -------HEPVNNLLDAVKVIKPTILIGSSGVGR-TFTKEVIEAMASFNEKPLILALSNPTSQ 356 (496)
Q Consensus 302 -------~~~~~~L~e~v~~vkptvLIG~S~~~g-~Ft~evv~~M~~~~~rPIIFaLSNPt~~ 356 (496)
.....++.|+++. +|++|=+ .... ...+++++.+.+..+.-.|+ .||-++.
T Consensus 66 ~~~~~~~i~~~~~~~~~~~~--aDlVi~a-v~~~~~~~~~v~~~l~~~~~~~~il-~s~tS~~ 124 (283)
T 4e12_A 66 AQKALGGIRYSDDLAQAVKD--ADLVIEA-VPESLDLKRDIYTKLGELAPAKTIF-ATNSSTL 124 (283)
T ss_dssp HHHHHHHCEEESCHHHHTTT--CSEEEEC-CCSCHHHHHHHHHHHHHHSCTTCEE-EECCSSS
T ss_pred HHHHHcCeEEeCCHHHHhcc--CCEEEEe-ccCcHHHHHHHHHHHHhhCCCCcEE-EECCCCC
Confidence 0123678888876 8988843 3221 14566777776655444444 3454433
No 44
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.68 E-value=0.029 Score=55.63 Aligned_cols=87 Identities=23% Similarity=0.257 Sum_probs=56.4
Q ss_pred HHHHHHHHHhC-CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc
Q 010990 221 AGVVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 299 (496)
Q Consensus 221 Agll~Alr~~g-~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a 299 (496)
.|++.+++..+ .+++..+++|+|||.+|.++|..|.. .|. ++++++|+. ..+ .....+.+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 67888888777 78899999999999988888877754 365 579988874 111 111111111
Q ss_pred c---ccCCCCCHHHHhcccCCcEEEEccCCC
Q 010990 300 H---EHEPVNNLLDAVKVIKPTILIGSSGVG 327 (496)
Q Consensus 300 ~---~~~~~~~L~e~v~~vkptvLIG~S~~~ 327 (496)
. ......++.++++. +|++|-+...+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 1 00001245666665 99999877754
No 45
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.29 E-value=0.13 Score=50.61 Aligned_cols=110 Identities=21% Similarity=0.216 Sum_probs=71.8
Q ss_pred HHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCC
Q 010990 227 LKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN 306 (496)
Q Consensus 227 lr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~ 306 (496)
++..+..+.+.+++|+|+|..|..+|+.+... |. +++.+|+.- .+ ....+ .+--......
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~d~~~----~~---~~~~~-~~g~~~~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAAL-----GA-------NVKVGARSS----AH---LARIT-EMGLVPFHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH---HHHHH-HTTCEEEEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHHC-----CC-------EEEEEECCH----HH---HHHHH-HCCCeEEchh
Confidence 34567889999999999999999999988642 53 688888751 11 11110 0100000114
Q ss_pred CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHH
Q 010990 307 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEA 364 (496)
Q Consensus 307 ~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda 364 (496)
+|.|.++. .|++|-... .+.++++.++.|. +..+|+=+|.-. .++..+.+
T Consensus 208 ~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk---~g~~lin~a~g~--~~~~~~~a 257 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIP-SMILNQTVLSSMT---PKTLILDLASRP--GGTDFKYA 257 (300)
T ss_dssp GHHHHSTT--CSEEEECCS-SCCBCHHHHTTSC---TTCEEEECSSTT--CSBCHHHH
T ss_pred hHHHHhhC--CCEEEECCC-hhhhCHHHHHhCC---CCCEEEEEeCCC--CCcCHHHH
Confidence 68888875 999997655 4789999888774 567888888632 23444444
No 46
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=93.98 E-value=0.068 Score=52.06 Aligned_cols=125 Identities=20% Similarity=0.292 Sum_probs=72.9
Q ss_pred HHHHHHHHHHhhCC--------CeeeEeeeCCCccHHHH--HHHHcCCCceeecCCCchhHHHHHHHHHHHHHhCCCccc
Q 010990 167 LDEFMSAVKQNYGE--------KVLIQFEDFANHNAFEL--LAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAE 236 (496)
Q Consensus 167 vdefv~av~~~fGp--------~~li~~EDf~~~~af~i--L~~yr~~~~~FnDDiQGTa~V~LAgll~Alr~~g~~l~d 236 (496)
+++|++.++..|.+ ..++.+=|- ++.|..+ .+....+ .=+|.|- .|++.+|+-. .+++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~--------~G~~~~l~~~--~~~~ 109 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDW--------VGVVKSLEGV--EVKE 109 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHH--------HHHHHHTTTC--CCCS
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchH--------HHHHHHHHhc--CCCC
Confidence 46777777754432 234445555 6666443 0000111 3445553 2667777644 5678
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 316 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 316 (496)
|++|+|||.+|-+++..|.. .|. ++|+++|+. ..|.+.+. ..+.. ....++.++++.
T Consensus 110 -~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la---~~~~~--~~~~~~~~~~~~-- 166 (253)
T 3u62_A 110 -PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALD---FPVKI--FSLDQLDEVVKK-- 166 (253)
T ss_dssp -SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCC---SSCEE--EEGGGHHHHHHT--
T ss_pred -eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHH---HHccc--CCHHHHHhhhcC--
Confidence 99999999999999888765 365 679999884 22211121 11110 112457777876
Q ss_pred CcEEEEccCC
Q 010990 317 PTILIGSSGV 326 (496)
Q Consensus 317 ptvLIG~S~~ 326 (496)
+|++|-+...
T Consensus 167 aDiVInatp~ 176 (253)
T 3u62_A 167 AKSLFNTTSV 176 (253)
T ss_dssp CSEEEECSST
T ss_pred CCEEEECCCC
Confidence 9999966543
No 47
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.96 E-value=0.025 Score=56.21 Aligned_cols=124 Identities=18% Similarity=0.310 Sum_probs=69.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCC-CCCHHHHhcccC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVKVIK 316 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~-~~~L~e~v~~vk 316 (496)
||.|+|||..|.++|..|.. .|. ...++++|.+---.++....+.+.. ++.....- ..+ .+++++
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~~i~~~~-~~a~~~-- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHGTRVWHGG-HSELAD-- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSCCEEEEEC-GGGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCCeEEEECC-HHHhCC--
Confidence 89999999999999987754 354 1479999986210000000011100 11111000 023 356776
Q ss_pred CcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCC
Q 010990 317 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGS 378 (496)
Q Consensus 317 ptvLIG~S~~~g~--------------Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGs 378 (496)
+|++|=+.+.+.. .-+++.+.|.++++.-+|+-.|||. ......+.+.+.-.-++++|.
T Consensus 68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~---~~~~~~~~~~~~~~rviG~gt 140 (304)
T 2v6b_A 68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPV---DLLTDLATQLAPGQPVIGSGT 140 (304)
T ss_dssp CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSH---HHHHHHHHHHSCSSCEEECTT
T ss_pred CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCch---HHHHHHHHHhCChhcEEeCCc
Confidence 8988855543321 1178888998888888888899996 333444444443344555553
No 48
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=93.84 E-value=0.097 Score=55.63 Aligned_cols=107 Identities=20% Similarity=0.339 Sum_probs=62.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-cCC-----CCCHHHH
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEP-----VNNLLDA 311 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~-----~~~L~e~ 311 (496)
||+|+||||.|. +..|+..+....-++.. -..|+|+|.+ ..|.+.....-+..++. ..+ ..++.||
T Consensus 2 KI~iIGaGs~~~--t~~l~~~~~~~~~l~~~--~~ei~L~Di~----~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eA 73 (477)
T 3u95_A 2 KISIVGAGSVRF--ALQLVEDIAQTDELSRE--DTHIYLMDVH----ERRLNASYILARKYVEELNSPVKVVKTESLDEA 73 (477)
T ss_dssp EEEEETTTSHHH--HHHHHHHHHTCTTTCST--TCEEEEECSC----HHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHH
T ss_pred EEEEECCCchhh--HHHHHHHHHhhHhcCCC--CCEEEEECCC----HHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence 899999999763 33333333322222211 1469999985 23211000011111111 111 2689999
Q ss_pred hcccCCcEEEEccCC-------------------------------------C---CCCC--------HHHHHHHHccCC
Q 010990 312 VKVIKPTILIGSSGV-------------------------------------G---RTFT--------KEVIEAMASFNE 343 (496)
Q Consensus 312 v~~vkptvLIG~S~~-------------------------------------~---g~Ft--------~evv~~M~~~~~ 343 (496)
+++ +|+.|=..+. + ++|- .++++.|.+.|+
T Consensus 74 l~g--AD~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~P 151 (477)
T 3u95_A 74 IEG--ADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMAP 151 (477)
T ss_dssp HTT--CSEEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHCT
T ss_pred hCC--CCEEEECcccccccccccccccceeeeccCcccceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhCC
Confidence 998 9998843311 1 1221 589999999999
Q ss_pred CceEEecCCCC
Q 010990 344 KPLILALSNPT 354 (496)
Q Consensus 344 rPIIFaLSNPt 354 (496)
.-+++=.|||.
T Consensus 152 ~A~~in~tNP~ 162 (477)
T 3u95_A 152 KAYLMQTANPV 162 (477)
T ss_dssp TCEEEECSSCH
T ss_pred CeEEEEecChH
Confidence 99999999996
No 49
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.77 E-value=0.21 Score=50.19 Aligned_cols=123 Identities=15% Similarity=0.180 Sum_probs=69.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchh-------hccc-------
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------WAHE------- 301 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~-------~a~~------- 301 (496)
-.||.|+|+|..|.+||..++.+ |. +++++|++- . .+...+.. ++..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~l~~l~~~G~~~g~~ 66 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEP----R---QITGALENIRKEMKSLQQSGSLKGSL 66 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCH----H---HHHHHHHHHHHHHHHHHHTTCCCSSS
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHHHHHHHHHHHHHcCcccccc
Confidence 36899999999999999998763 65 588888751 1 11111100 0000
Q ss_pred --------cCCCCCHHHHhcccCCcEEEEccCCCC-CCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcE
Q 010990 302 --------HEPVNNLLDAVKVIKPTILIGSSGVGR-TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRA 372 (496)
Q Consensus 302 --------~~~~~~L~e~v~~vkptvLIG~S~~~g-~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~a 372 (496)
-....++.|++++ +|++| .+.+.+ .+.+++++.+.++.+.-.|++ ||=++ .++.+..+......
T Consensus 67 ~~~~~~~~i~~~~~~~eav~~--aDlVi-eavpe~~~~k~~v~~~l~~~~~~~~Ii~-s~tS~---i~~~~la~~~~~~~ 139 (319)
T 2dpo_A 67 SAEEQLSLISSCTNLAEAVEG--VVHIQ-ECVPENLDLKRKIFAQLDSIVDDRVVLS-SSSSC---LLPSKLFTGLAHVK 139 (319)
T ss_dssp CHHHHHHTEEEECCHHHHTTT--EEEEE-ECCCSCHHHHHHHHHHHHTTCCSSSEEE-ECCSS---CCHHHHHTTCTTGG
T ss_pred chHHHhhceEEeCCHHHHHhc--CCEEE-EeccCCHHHHHHHHHHHHhhCCCCeEEE-EeCCC---hHHHHHHHhcCCCC
Confidence 0113689999987 88887 333332 245677788877665444554 44332 44555544433211
Q ss_pred EEecCCCCCCcc
Q 010990 373 IFASGSPFDPFE 384 (496)
Q Consensus 373 i~AsGsPf~pv~ 384 (496)
=|.-+-||.|+.
T Consensus 140 r~ig~Hp~~P~~ 151 (319)
T 2dpo_A 140 QCIVAHPVNPPY 151 (319)
T ss_dssp GEEEEEECSSTT
T ss_pred CeEEeecCCchh
Confidence 123344776664
No 50
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.55 E-value=0.14 Score=50.78 Aligned_cols=97 Identities=13% Similarity=0.268 Sum_probs=63.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhch------hhccccCC---CCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK------PWAHEHEP---VNN 307 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~------~~a~~~~~---~~~ 307 (496)
.||.|+|||+.|.++|..++.. |+ .+++++|.+- ++ +..... .+...... ..+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~~i~~t~d 66 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GI---PQGKALDITHSMVMFGSTSKVIGTDD 66 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SH---HHHHHHHHHHHHHHHTCCCCEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hH---HHHHHHHHHhhhhhcCCCcEEEECCC
Confidence 5899999999999999998764 64 2599999852 11 111100 11100111 145
Q ss_pred HHHHhcccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCC
Q 010990 308 LLDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 308 L~e~v~~vkptvLIG~S~~~g~--------------Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
+ +++++ +|++|=+-+.+.. +-+++++.+.++++.-||+-.|||.
T Consensus 67 ~-~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~ 124 (317)
T 2ewd_A 67 Y-ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPL 124 (317)
T ss_dssp G-GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred H-HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 6 77776 8988865543321 2467888888888999999999996
No 51
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.53 E-value=0.1 Score=51.81 Aligned_cols=49 Identities=20% Similarity=0.264 Sum_probs=41.7
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.|++.+|+-.+.++++.+++|+|||.+|-+++..|.+ .|. ++|+++++.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt 155 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN 155 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 6889999988999999999999999998888887765 365 689998874
No 52
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=93.52 E-value=0.14 Score=52.72 Aligned_cols=159 Identities=14% Similarity=0.117 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHhhCCCeeeEeeeCCCccHHHHHHHHcCCCcee-ecC------C---CchhHHHHHHHHHHHHH-hCC
Q 010990 164 AELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVF-NDD------I---QGTASVVLAGVVAALKL-IGG 232 (496)
Q Consensus 164 ~~~vdefv~av~~~fGp~~li~~EDf~~~~af~iL~~yr~~~~~F-nDD------i---QGTa~V~LAgll~Alr~-~g~ 232 (496)
.+++..|.+++.+..|+ -|-=+|++..-. .+...-+++.++ --- + .-||.=+.-++..+++. .|.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~~--~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTVD--DMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCHH--HHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCHH--HHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 34567788888887775 455688875432 333333333111 111 1 23444444455566665 476
Q ss_pred -CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHH
Q 010990 233 -TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 311 (496)
Q Consensus 233 -~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~ 311 (496)
+|++.+|+|.|+|..|..+|+.|.+. |. ++++.|++ . +.+..+...|- ...-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~----~---~~l~~~a~~~g---a~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN----K---AAVSAAVAEEG---ADAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC----H---HHHHHHHHHHC---CEECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC----H---HHHHHHHHHcC---CEEEChHHH
Confidence 79999999999999999999998653 64 47788853 1 11222222221 011123333
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010990 312 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 354 (496)
Q Consensus 312 v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN-Pt 354 (496)
.. .+.|++|=++ ..+.++++.++.| ...+|.--+| |+
T Consensus 227 l~-~~~DIvip~a-~~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 227 YG-VTCDIFAPCA-LGAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp TT-CCCSEEEECS-CSCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred hc-cCCcEeeccc-hHHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 32 5789999654 4668999888887 4567776777 54
No 53
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.49 E-value=0.11 Score=52.20 Aligned_cols=105 Identities=17% Similarity=0.279 Sum_probs=66.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCC---CCCHHHHhc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 313 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~---~~~L~e~v~ 313 (496)
.||.|+|||+.|.++|.+|... |+ -+++++|.+-=..+.-...+.+. ..+...... ..++.++++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~~ea~~ 77 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVKGMPEGKALDLSHV-TSVVDTNVSVRAEYSYEAALT 77 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSSSHHHHHHHHHHHH-HHHTTCCCCEEEECSHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECChhHHHHHHHHHHhh-hhccCCCCEEEEeCCHHHHhC
Confidence 5899999999999999998763 54 13999998621000000001111 111111111 267888898
Q ss_pred ccCCcEEEEccCCC---CC----------------CCHHHHHHHHccCCCceEEecCCCCC
Q 010990 314 VIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTS 355 (496)
Q Consensus 314 ~vkptvLIG~S~~~---g~----------------Ft~evv~~M~~~~~rPIIFaLSNPt~ 355 (496)
+ +|++|=+.+.+ |. .-+++.+.|.++++.-+|+=-|||..
T Consensus 78 ~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~ 136 (331)
T 1pzg_A 78 G--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLD 136 (331)
T ss_dssp T--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred C--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchH
Confidence 7 99988665333 22 13688889999998888888899973
No 54
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=93.47 E-value=0.65 Score=48.07 Aligned_cols=196 Identities=12% Similarity=0.078 Sum_probs=116.2
Q ss_pred CCCceeecCCC---chhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 203 TTHLVFNDDIQ---GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 203 ~~~~~FnDDiQ---GTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
..+.+.|.--- .+|=-+++.+|+..|-.|..|.+.+|.|+|.|..|-.+|+.+... |+ +++.+|+
T Consensus 80 ~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~ 147 (380)
T 2o4c_A 80 AGIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGL-----GW-------KVLVCDP 147 (380)
T ss_dssp HTCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CCCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHC-----CC-------EEEEEcC
Confidence 35666665432 234458999999999999999999999999999999999988643 65 5888876
Q ss_pred CCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc---C-----CCCCCCHHHHHHHHccCCCceEEecC
Q 010990 280 KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS---G-----VGRTFTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 280 ~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S---~-----~~g~Ft~evv~~M~~~~~rPIIFaLS 351 (496)
..- . . . ......+|.|+++. .|+++=.- . ..+.|+++.++.|. +..++.=.|
T Consensus 148 ~~~------~----~--~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~s 207 (380)
T 2o4c_A 148 PRQ------A----R--E---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNAS 207 (380)
T ss_dssp HHH------H----H--S---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECS
T ss_pred Chh------h----h--c---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECC
Confidence 310 0 0 0 01123579999986 89887542 1 24578999999885 567888777
Q ss_pred CCCCCCCCCHHHHhcccCCcEEEec-----CCCCCCcccCCeeeCccCcccccccchhhHHHHHhCCcccCHHHHHHHHH
Q 010990 352 NPTSQSECTAEEAYTWSKGRAIFAS-----GSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASE 426 (496)
Q Consensus 352 NPt~~~E~~peda~~~t~G~ai~As-----GsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~itd~m~~aAA~ 426 (496)
+-..--|-.-.+|+ .+|+..-|. .=|.+ +.. .. + +|+++-|=++-....+ ...|...+++
T Consensus 208 RG~vvd~~aL~~aL--~~g~i~~A~LDV~~~EP~~----~~~-l~--~-~nvi~TPHiag~t~e~-----~~~~~~~~~~ 272 (380)
T 2o4c_A 208 RGAVVDNQALRRLL--EGGADLEVALDVWEGEPQA----DPE-LA--A-RCLIATPHIAGYSLEG-----KLRGTAQIYQ 272 (380)
T ss_dssp CGGGBCHHHHHHHH--HTTCCEEEEESCCTTTTSC----CHH-HH--T-TCSEECSSCTTCCHHH-----HHHHHHHHHH
T ss_pred CCcccCHHHHHHHH--HhCCCceEEeeeeccCCCC----chh-hc--c-CCEEEccccCcCCHHH-----HHHHHHHHHH
Confidence 63211221122333 345533331 11211 111 11 1 4788888776322222 2345555666
Q ss_pred HHHhcccccc-CCCCcccCC
Q 010990 427 ALAKQVTEEN-FEKGLIYPP 445 (496)
Q Consensus 427 aLA~~v~~e~-l~~g~l~P~ 445 (496)
.+......+. ..-..++|.
T Consensus 273 nl~~~l~g~~~~~~~~~~p~ 292 (380)
T 2o4c_A 273 AYCAWRGIAERVSLQDVLPE 292 (380)
T ss_dssp HHHHHHTCCCCCCGGGTCCC
T ss_pred HHHHHHcCCCccchhhcCCC
Confidence 6666654332 222345554
No 55
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=93.41 E-value=0.12 Score=52.08 Aligned_cols=50 Identities=32% Similarity=0.403 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 220 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 220 LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
-.|++.+|+-.+.++++.+++|+|||.+|-++|..|.. .|. ++|+++++.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 45778888888899999999999999887777777754 365 689999885
No 56
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=93.37 E-value=0.11 Score=51.36 Aligned_cols=97 Identities=20% Similarity=0.193 Sum_probs=60.4
Q ss_pred HHHHHHHHHH-hhCCCeeeEeeeCCCccHHHHHHHHcC--------CCceeecC--CCc--hhHHHHHHHHHHHHHhCCC
Q 010990 167 LDEFMSAVKQ-NYGEKVLIQFEDFANHNAFELLAKYGT--------THLVFNDD--IQG--TASVVLAGVVAALKLIGGT 233 (496)
Q Consensus 167 vdefv~av~~-~fGp~~li~~EDf~~~~af~iL~~yr~--------~~~~FnDD--iQG--Ta~V~LAgll~Alr~~g~~ 233 (496)
+.++++.++. .|.+ ++.--=-...+++++|+... +..++++| ..| |- -.|++.+|+-.+.+
T Consensus 50 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~~~~g~l~G~NTD---~~G~~~~L~~~~~~ 123 (281)
T 3o8q_A 50 FTEAAKHFFAQGGRG---CNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTD---GEGLVQDLLAQQVL 123 (281)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTSHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEEEECCH---HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCCE---EEECCccHHHHHHHHhhcCHHHHhhCeeeEEEEcCCCcEEEEecH---HHHHHHHHHHhCCC
Confidence 4677777663 4544 43322222334444443321 23344444 233 33 35778888888889
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+++.+++|+|||.+|-+++..|.+ .|. ++++++++.
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred ccCCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 999999999999888887777754 365 579988874
No 57
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=93.34 E-value=0.12 Score=52.03 Aligned_cols=49 Identities=33% Similarity=0.443 Sum_probs=40.1
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.|++.+|+-.+.++++.+++|+|||.+|-+++..|.+ .|. ++|+++++.
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt 181 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK 181 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC
Confidence 5677888888889999999999999888888777764 365 689998874
No 58
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=93.33 E-value=0.6 Score=50.17 Aligned_cols=179 Identities=18% Similarity=0.241 Sum_probs=116.7
Q ss_pred CChhhhHHHHHHHHHHHHH--hhCCCeeeEeeeCCCccH--HHHHHHHcC---CC------ceeecC---------CCch
Q 010990 158 ATGQEYAELLDEFMSAVKQ--NYGEKVLIQFEDFANHNA--FELLAKYGT---TH------LVFNDD---------IQGT 215 (496)
Q Consensus 158 ~~g~~y~~~vdefv~av~~--~fGp~~li~~EDf~~~~a--f~iL~~yr~---~~------~~FnDD---------iQGT 215 (496)
.+..|-..|.-.||+.+.+ -.||..-|-=+|++..-. --+.+.|+. .. ++-..- -.-|
T Consensus 136 ~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eAT 215 (501)
T 3mw9_A 136 YTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISAT 215 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCch
Confidence 3567778888999999986 778888888899987532 235777752 11 111111 1224
Q ss_pred hHHHHHHHHH------HHHHhCC--CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCC
Q 010990 216 ASVVLAGVVA------ALKLIGG--TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 287 (496)
Q Consensus 216 a~V~LAgll~------Alr~~g~--~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r 287 (496)
|-=+.-++-+ +++..|. .|++.||+|.|.|..|...|+.|.+. |. +=+-+.|++|-|+...
T Consensus 216 g~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~iyd~~ 284 (501)
T 3mw9_A 216 GRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSIWNPD 284 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceEECCC
Confidence 4333333333 3446675 48999999999999999999998753 64 4466899999999753
Q ss_pred cCCCchhch-hhccccCCC------CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010990 288 KDSLQHFKK-PWAHEHEPV------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 354 (496)
Q Consensus 288 ~~~l~~~k~-~~a~~~~~~------~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN-Pt 354 (496)
+++..+. .+....... ..+.+.+-.++.||||=+..+ +..|++-+..+ +-.||.--+| |+
T Consensus 285 --Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 285 --GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp --CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred --CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 4543221 121111100 001112445689999988885 79999988876 5789999999 54
No 59
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=93.26 E-value=0.28 Score=48.92 Aligned_cols=101 Identities=24% Similarity=0.322 Sum_probs=65.0
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCC---CCCHHHHhc
Q 010990 238 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 313 (496)
Q Consensus 238 riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~---~~~L~e~v~ 313 (496)
||+|+|| |..|..++.+|+. .|+ ...++++|.+- .++...+|.+...+ . +-.. ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~--~~~~a~dL~~~~~~-~-~l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAH--TPGVAADLSHIETR-A-TVKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSS--HHHHHHHHTTSSSS-C-EEEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCc--cHHHHHHHhccCcC-c-eEEEecCCCCHHHHhC
Confidence 8999998 9999998877653 354 25799999874 11100011111100 0 0001 135888998
Q ss_pred ccCCcEEEEccCCCC--------------CCCHHHHHHHHccCCCceEEecCCCC
Q 010990 314 VIKPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 314 ~vkptvLIG~S~~~g--------------~Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
+ +|+.|=+.+.+. ...+++++.|.+++...+|+=.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 8 899885544432 23567888888889998988899996
No 60
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=93.26 E-value=0.26 Score=52.82 Aligned_cols=99 Identities=15% Similarity=0.171 Sum_probs=73.2
Q ss_pred HHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCC
Q 010990 228 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN 307 (496)
Q Consensus 228 r~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~ 307 (496)
+.+|..+...+++|+|.|..|.++|+.+... |. +++.+|++.. ... ......-...+
T Consensus 269 ~~~g~~L~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~V~v~d~~~~----------~~~-~a~~~G~~~~~ 325 (494)
T 3d64_A 269 RATDVMIAGKIAVVAGYGDVGKGCAQSLRGL-----GA-------TVWVTEIDPI----------CAL-QAAMEGYRVVT 325 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSCHH----------HHH-HHHTTTCEECC
T ss_pred hccccccCCCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCChH----------hHH-HHHHcCCEeCC
Confidence 5688899999999999999999999988532 53 5888887521 000 00001111247
Q ss_pred HHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCC
Q 010990 308 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 308 L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
|.|+++. .|+++......+.++++.++.|. +.-||.=.|...
T Consensus 326 l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 326 MEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp HHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred HHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 9999986 99999997767899999999995 567888888855
No 61
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.19 E-value=0.2 Score=48.73 Aligned_cols=84 Identities=23% Similarity=0.358 Sum_probs=56.5
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 300 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~ 300 (496)
.|++.+++-.+..++..|++|+|+|.+|-++|..|... |. +++++|++- .+ .......+.
T Consensus 114 ~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~~----~~---~~~l~~~~g- 173 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRTK----EK---AIKLAQKFP- 173 (275)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSH----HH---HHHHTTTSC-
T ss_pred HHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECCH----HH---HHHHHHHcC-
Confidence 48888888888889999999999999999999888653 52 688888741 11 111111110
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCCC
Q 010990 301 EHEPVNNLLDAVKVIKPTILIGSSGVG 327 (496)
Q Consensus 301 ~~~~~~~L~e~v~~vkptvLIG~S~~~ 327 (496)
.....++.++++. +|++|-+...+
T Consensus 174 -~~~~~~~~~~~~~--aDiVi~atp~~ 197 (275)
T 2hk9_A 174 -LEVVNSPEEVIDK--VQVIVNTTSVG 197 (275)
T ss_dssp -EEECSCGGGTGGG--CSEEEECSSTT
T ss_pred -CeeehhHHhhhcC--CCEEEEeCCCC
Confidence 0112367777775 99999765543
No 62
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.13 E-value=0.23 Score=47.23 Aligned_cols=109 Identities=15% Similarity=0.207 Sum_probs=62.4
Q ss_pred hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc--cCCCcCCCc-hhchhhcccc--CC
Q 010990 230 IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI--VSSRKDSLQ-HFKKPWAHEH--EP 304 (496)
Q Consensus 230 ~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi--~~~r~~~l~-~~k~~~a~~~--~~ 304 (496)
...++...||.|+|+|..|.++|..|... |. +++++|++-=- .+.....+. ....+++... ..
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----GH-------EVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 34568889999999999999999998763 53 68888875211 000000000 0012233221 11
Q ss_pred CCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHH-HccCCCceEEecCCCC
Q 010990 305 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM-ASFNEKPLILALSNPT 354 (496)
Q Consensus 305 ~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M-~~~~~rPIIFaLSNPt 354 (496)
..++.|+++. +|++| ++-.+. ...++++.+ ...-+..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 2578899987 89887 444332 345666666 4333677999999974
No 63
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=93.10 E-value=0.12 Score=50.96 Aligned_cols=99 Identities=19% Similarity=0.247 Sum_probs=60.9
Q ss_pred HHHHHHHHHH-hhCCCeeeEeeeCCCccHHHHHHHHcC--------CCceeecC-CCchhHHHHHHHHHH-HHHhCCCcc
Q 010990 167 LDEFMSAVKQ-NYGEKVLIQFEDFANHNAFELLAKYGT--------THLVFNDD-IQGTASVVLAGVVAA-LKLIGGTLA 235 (496)
Q Consensus 167 vdefv~av~~-~fGp~~li~~EDf~~~~af~iL~~yr~--------~~~~FnDD-iQGTa~V~LAgll~A-lr~~g~~l~ 235 (496)
+.++++.++. .|++ ++.--=-...+++++|+... +..++.|+ ..|.-.= -.|++.+ |+-.+.+++
T Consensus 44 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l~ 119 (272)
T 3pwz_A 44 FEAQVLQFRSEGGKG---MNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAENFD-GIGLLRDIEENLGEPLR 119 (272)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTCHHHHHHHCSEECHHHHHHTCCSEEEEETTEEEEECCH-HHHHHHHHHTTSCCCCT
T ss_pred HHHHHHHHhhCCCCE---EEECchhHHHHHHHHhhCCHHHHHhCccceEEccCCeEEEecCC-HHHHHHHHHHHcCCCcc
Confidence 4677777763 4544 44332223345555543321 11233333 3442222 3578888 887788899
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.+++|+|||.+|-+++..|.+ .|. ++|+++++.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 9999999999888877777754 365 579988874
No 64
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.95 E-value=0.1 Score=50.40 Aligned_cols=37 Identities=27% Similarity=0.384 Sum_probs=32.7
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+|++.||+|+|+|..|..+|..|+.+ |+ ++|.++|.+
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 47788999999999999999999764 77 789999987
No 65
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.79 E-value=0.13 Score=50.65 Aligned_cols=101 Identities=14% Similarity=0.192 Sum_probs=62.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch---hchhhcc-ccCC-CCCHHHH
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH---FKKPWAH-EHEP-VNNLLDA 311 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~---~k~~~a~-~~~~-~~~L~e~ 311 (496)
.||.|+|||+.|.++|..|... |+ ..+++++|++- .+.+.+.. +...+.. .... ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999988653 54 14799999851 11111110 0001110 0000 2456 67
Q ss_pred hcccCCcEEEEccCCCCC------C------------CHHHHHHHHccCCCceEEecCCCC
Q 010990 312 VKVIKPTILIGSSGVGRT------F------------TKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 312 v~~vkptvLIG~S~~~g~------F------------t~evv~~M~~~~~rPIIFaLSNPt 354 (496)
+++ +|++|=+-..+.. - -+++++.+.++++..+|+-+|||.
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~ 125 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPV 125 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcH
Confidence 765 8988754443211 1 158888888888888888899996
No 66
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=92.78 E-value=0.95 Score=45.15 Aligned_cols=122 Identities=15% Similarity=0.085 Sum_probs=82.4
Q ss_pred CCCceeecCCCc---hhHHHHHHHHHHHHH----------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhc
Q 010990 203 TTHLVFNDDIQG---TASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQT 263 (496)
Q Consensus 203 ~~~~~FnDDiQG---Ta~V~LAgll~Alr~----------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~ 263 (496)
..+.+.|----. +|=-+++.+|+..|- .+..+.+.+|.|+|.|..|-.+|+.+...
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~----- 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM----- 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----
Confidence 467777754333 333478888888774 35679999999999999999999988643
Q ss_pred CCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHHHHH
Q 010990 264 KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMA 339 (496)
Q Consensus 264 G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evv~~M~ 339 (496)
|. +++.+|+.. + .. ......-...++.|+++. .|+++=.-- ..+.++++.++.|.
T Consensus 165 G~-------~V~~~d~~~-------~---~~--~~~~~g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD-------I---RE--KAEKINAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC-------C---HH--HHHHTTCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc-------c---hh--HHHhcCceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 64 588888641 1 10 000000011378898886 898885422 23578899999885
Q ss_pred ccCCCceEEecCCC
Q 010990 340 SFNEKPLILALSNP 353 (496)
Q Consensus 340 ~~~~rPIIFaLSNP 353 (496)
+..++.-.|.-
T Consensus 224 ---~ga~lIn~arg 234 (313)
T 2ekl_A 224 ---DNVIIVNTSRA 234 (313)
T ss_dssp ---TTEEEEESSCG
T ss_pred ---CCCEEEECCCC
Confidence 56788888874
No 67
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.76 E-value=0.18 Score=49.71 Aligned_cols=48 Identities=33% Similarity=0.396 Sum_probs=40.1
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
.|++.+++-.|.+++..|++++|||.|+-+|+-.|.+ .|. ++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCC
Confidence 3567888888999999999999999999988877754 365 68999987
No 68
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=92.31 E-value=1 Score=48.16 Aligned_cols=107 Identities=17% Similarity=0.212 Sum_probs=75.3
Q ss_pred HHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-cCCCC
Q 010990 228 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVN 306 (496)
Q Consensus 228 r~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~ 306 (496)
|..+..+...+|+|+|+|..|.++|..+... |. +++.+|++- .+...|+. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka~-----Ga-------~Viv~d~~~------------~~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKGQ-----GA-------RVSVTEIDP------------INALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCH------------HHHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCCH------------HHHHHHHHcCCEEe
Confidence 4456678899999999999999999888542 53 588887641 11112221 11124
Q ss_pred CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHh
Q 010990 307 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAY 365 (496)
Q Consensus 307 ~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~ 365 (496)
++.|+++. .|++|-+.+..+.++++.++.|. +.-+|.-.+... .|+..+..+
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~ 373 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLE 373 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHH
Confidence 68888875 99999988878889999999985 566887788765 366655544
No 69
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.18 E-value=0.2 Score=49.97 Aligned_cols=105 Identities=17% Similarity=0.256 Sum_probs=62.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCC-CCCHHHHhccc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVKVI 315 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~-~~~L~e~v~~v 315 (496)
.||.|+|||..|.++|-.|... |+ ...++++|.+--..+....++.+. .++...... ..+..+++++
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5999999999999999776542 54 257999998621111000001111 111110000 0133567776
Q ss_pred CCcEEEEccCCCC--------------CCCHHHHHHHHccCCCceEEecCCCC
Q 010990 316 KPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 316 kptvLIG~S~~~g--------------~Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
+|+.|=+.+.+. ..-+++++.|.++++.-++|=.|||.
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv 126 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV 126 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch
Confidence 999885544432 12357788888888888888889996
No 70
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.13 E-value=0.19 Score=50.92 Aligned_cols=96 Identities=20% Similarity=0.284 Sum_probs=62.1
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc----CCCCCHH
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLL 309 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~----~~~~~L~ 309 (496)
++..+++|+|||.+|.+++..+... |. +++++|++ ..| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~-----Ga-------~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL-----GA-------QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 6678999999999999998887642 52 68888874 111 222222232210 0113466
Q ss_pred HHhcccCCcEEEEccCCCCC-----CCHHHHHHHHccCCCceEEecCCC
Q 010990 310 DAVKVIKPTILIGSSGVGRT-----FTKEVIEAMASFNEKPLILALSNP 353 (496)
Q Consensus 310 e~v~~vkptvLIG~S~~~g~-----Ft~evv~~M~~~~~rPIIFaLSNP 353 (496)
+.++. .|++|.+.+.++. ++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 77764 9999998876542 5888888875 45577777654
No 71
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.94 E-value=0.26 Score=43.21 Aligned_cols=37 Identities=22% Similarity=0.388 Sum_probs=28.5
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 232 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 232 ~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+++...+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 44567799999999999999998864 25 368889875
No 72
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.90 E-value=0.12 Score=51.93 Aligned_cols=128 Identities=16% Similarity=0.236 Sum_probs=71.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc--CCCCCHHHHhcc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 314 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~--~~~~~L~e~v~~ 314 (496)
.||.|+|||+.|.++|.++.. .|+ -+++++|.+-=..++....+.+....+.... ....++ +++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~------~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDL------GDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC
Confidence 589999999999999988765 365 1399999862101000000111111111010 011466 78877
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccc--CCcEEEecCC
Q 010990 315 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASGS 378 (496)
Q Consensus 315 vkptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t--~G~ai~AsGs 378 (496)
+|++|=+.+.+ |. .-+++.+.+.++++.-+|+=-|||... ..+-+.+.+ .-.-++++|+
T Consensus 83 --aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~---~t~~~~~~~~~~~~rviG~~t 157 (328)
T 2hjr_A 83 --SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDA---MVYYFKEKSGIPANKVCGMSG 157 (328)
T ss_dssp --CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH---HHHHHHHHHCCCGGGEEESCH
T ss_pred --CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHH---HHHHHHHhcCCChhhEEEeCc
Confidence 89888554322 21 145778888888888887667999732 234443332 2234566664
Q ss_pred CCC
Q 010990 379 PFD 381 (496)
Q Consensus 379 Pf~ 381 (496)
+..
T Consensus 158 ~Ld 160 (328)
T 2hjr_A 158 VLD 160 (328)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 73
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=91.90 E-value=0.25 Score=47.35 Aligned_cols=81 Identities=25% Similarity=0.322 Sum_probs=54.2
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 300 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~ 300 (496)
.|++.+++-.+.++++ |++|+|+|.+|-.+|..|.. .|. +++++|++- .+ .....+.+..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~~----~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRTP----QR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSH----HH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECCH----HH---HHHHHHHhcc
Confidence 5888888888889999 99999999999999888754 252 588888741 11 1111112211
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCCC
Q 010990 301 EHEPVNNLLDAVKVIKPTILIGSSGVG 327 (496)
Q Consensus 301 ~~~~~~~L~e~v~~vkptvLIG~S~~~ 327 (496)
. ..++.++ +. +|++|-+...+
T Consensus 162 ~---~~~~~~~-~~--~Divi~~tp~~ 182 (263)
T 2d5c_A 162 R---AVPLEKA-RE--ARLLVNATRVG 182 (263)
T ss_dssp E---ECCGGGG-GG--CSEEEECSSTT
T ss_pred c---hhhHhhc-cC--CCEEEEccCCC
Confidence 1 3467676 54 99999665543
No 74
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.88 E-value=0.32 Score=48.54 Aligned_cols=120 Identities=15% Similarity=0.251 Sum_probs=73.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-cCCCCCHHHHhccc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 315 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e~v~~v 315 (496)
.||.|+|||..|.++|..++.. |+ -..++|+|.+-= ..+...++.+ +... .....++ +++++
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999998643 54 267999998631 1111101111 2111 0112566 77877
Q ss_pred CCcEEEEccCCCC-------------CCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccC--CcEEEecC
Q 010990 316 KPTILIGSSGVGR-------------TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASG 377 (496)
Q Consensus 316 kptvLIG~S~~~g-------------~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~--G~ai~AsG 377 (496)
+|++|=+.+.+. ..-+++++.|.++++.-+|+=.|||.. +..+-+++.+. -.-+|++|
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~---~~t~~~~~~~~~p~~rviG~g 150 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE---IMTYVTWKLSTFPANRVIGIG 150 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH---HHHHHHHHHHCCCGGGEEECT
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH---HHHHHHHHhcCCCHHHeeCCC
Confidence 999985554331 013578888999999999888999963 44444544321 12366665
No 75
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=91.86 E-value=0.21 Score=50.10 Aligned_cols=111 Identities=14% Similarity=0.079 Sum_probs=66.4
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC--Ccc--cCCCcCCCchhchhhccccCCCCCHHHH
Q 010990 237 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK--GLI--VSSRKDSLQHFKKPWAHEHEPVNNLLDA 311 (496)
Q Consensus 237 ~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~--GLi--~~~r~~~l~~~k~~~a~~~~~~~~L~e~ 311 (496)
.||+|.|| |..|..++..|+. .|+-..+-...++++|.+ ..- .++...+|.+.-.++..+.....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 59999998 9999998887754 244111112479999975 100 0000000111001222221122578899
Q ss_pred hcccCCcEEEEccCCCCC--------------CCHHHHHHHHccC-CCceEEecCCCC
Q 010990 312 VKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EKPLILALSNPT 354 (496)
Q Consensus 312 v~~vkptvLIG~S~~~g~--------------Ft~evv~~M~~~~-~rPIIFaLSNPt 354 (496)
+++ .|++|=+.+.+.. .++++++.+.+++ .+.+|+=.|||.
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 987 8988855554421 2567889999986 787888889996
No 76
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=91.82 E-value=0.14 Score=52.44 Aligned_cols=37 Identities=27% Similarity=0.450 Sum_probs=33.5
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+|++.||+|+|||..|..+|..|+.+ |+ ++|.++|.+
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCC
Confidence 57889999999999999999999875 87 789999997
No 77
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=91.82 E-value=0.61 Score=46.72 Aligned_cols=113 Identities=16% Similarity=0.173 Sum_probs=71.6
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 300 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~ 300 (496)
++.+++-.+..+ ...++.|+|+|..|-..++.|... .++ ++|+++|+. +.+ .....+.+
T Consensus 108 ~s~laa~~La~~--~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~a~---~la~~l~~ 166 (313)
T 3hdj_A 108 CTVLAAGALARP--RSSVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------ASP---EILERIGR 166 (313)
T ss_dssp HHHHHHHHHSCT--TCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------CCH---HHHHHHHH
T ss_pred HHHHHHHhhccC--CCcEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------HHH---HHHHHHHH
Confidence 344555555433 457999999999998888877643 233 789999986 211 22222221
Q ss_pred c----cCCCCCHHHHhcccCCcEEEEccCCC-CCCCHHHHHHHHccCCCceEEecCC--CCCCCCCCHHHH
Q 010990 301 E----HEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAEEA 364 (496)
Q Consensus 301 ~----~~~~~~L~e~v~~vkptvLIG~S~~~-g~Ft~evv~~M~~~~~rPIIFaLSN--Pt~~~E~~peda 364 (496)
. .... ++.|++++ +|++|-+.... ..|..+.+ .+..+|..++- |. +-|+.++-.
T Consensus 167 ~~g~~~~~~-~~~eav~~--aDIVi~aT~s~~pvl~~~~l------~~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 167 RCGVPARMA-APADIAAQ--ADIVVTATRSTTPLFAGQAL------RAGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp HHTSCEEEC-CHHHHHHH--CSEEEECCCCSSCSSCGGGC------CTTCEEEECCCSSTT-CCCCCHHHH
T ss_pred hcCCeEEEe-CHHHHHhh--CCEEEEccCCCCcccCHHHc------CCCcEEEECCCCCCc-hhhcCHHHH
Confidence 1 1123 89999987 99999665432 24554433 35678888876 44 578888765
No 78
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.78 E-value=0.24 Score=49.69 Aligned_cols=100 Identities=18% Similarity=0.268 Sum_probs=63.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcC----CCchhchhhccccCC---CCCHH
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEP---VNNLL 309 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~----~l~~~k~~~a~~~~~---~~~L~ 309 (496)
.||.|+|||+.|.++|.+|+.. |+- +++++|.+ .++.+ .+.+.. .+...... ..++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~~------~v~L~Di~----~~~l~~~~~~l~~~~-~~~~~~~~i~~t~d~- 67 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NLG------DVVLFDIV----KNMPHGKALDTSHTN-VMAYSNCKVSGSNTY- 67 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TCC------EEEEECSS----SSHHHHHHHHHHTHH-HHHTCCCCEEEECCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEeCC----HHHHHHHHHHHHhhh-hhcCCCcEEEECCCH-
Confidence 4899999999999999888753 651 39999975 22110 011110 11110111 1467
Q ss_pred HHhcccCCcEEEEccCCC---CC----------------CCHHHHHHHHccCCCceEEecCCCCC
Q 010990 310 DAVKVIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTS 355 (496)
Q Consensus 310 e~v~~vkptvLIG~S~~~---g~----------------Ft~evv~~M~~~~~rPIIFaLSNPt~ 355 (496)
+++++ +|++|=+.+.+ |. .-+++.+.|.++++.-+|+=.|||..
T Consensus 68 ~al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~ 130 (322)
T 1t2d_A 68 DDLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVD 130 (322)
T ss_dssp GGGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChH
Confidence 78887 99988554333 21 34678888888898888777799973
No 79
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=91.78 E-value=0.92 Score=47.02 Aligned_cols=120 Identities=10% Similarity=0.093 Sum_probs=87.4
Q ss_pred CCCceeecCC---CchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 203 TTHLVFNDDI---QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 203 ~~~~~FnDDi---QGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
..|.+.|.-- +.+|=-+++.+|+..|-.|..|.+.++.|+|.|..|-.+|+.+... |+ +++.+|+
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~ 150 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDP 150 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECC
Confidence 4666666543 3345568999999999999999999999999999999999999653 65 5888876
Q ss_pred CCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC--------CCCCCCHHHHHHHHccCCCceEEecC
Q 010990 280 KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG--------VGRTFTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 280 ~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~--------~~g~Ft~evv~~M~~~~~rPIIFaLS 351 (496)
.. . . .. ......+|.|+++. .|+++=.-- ..+.|+++.++.|. +..|+.=.|
T Consensus 151 ~~----~--~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~a 210 (381)
T 3oet_A 151 PR----A--A-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINAC 210 (381)
T ss_dssp HH----H--H-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECS
T ss_pred Ch----H--H-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECC
Confidence 21 0 0 00 11123679999987 898874321 34589999999995 678888888
Q ss_pred CCC
Q 010990 352 NPT 354 (496)
Q Consensus 352 NPt 354 (496)
+-.
T Consensus 211 RG~ 213 (381)
T 3oet_A 211 RGP 213 (381)
T ss_dssp CGG
T ss_pred CCc
Confidence 754
No 80
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.68 E-value=0.32 Score=48.43 Aligned_cols=98 Identities=15% Similarity=0.326 Sum_probs=61.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchh------hcccc-CCCCCHHH
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP------WAHEH-EPVNNLLD 310 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~------~a~~~-~~~~~L~e 310 (496)
||.|+|||..|.++|..|+.. |. ..+++++|++- .+ +...... +.... -...+ .+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~i~~~d-~~ 63 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KR---AEGDALDLIHGTPFTRRANIYAGD-YA 63 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HH---HHHHHHHHHHHGGGSCCCEEEECC-GG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HH---HHHHHHHHHhhhhhcCCcEEEeCC-HH
Confidence 799999999999999988653 54 14799999851 11 1111111 11000 00124 35
Q ss_pred HhcccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCCC
Q 010990 311 AVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTS 355 (496)
Q Consensus 311 ~v~~vkptvLIG~S~~~g~--------------Ft~evv~~M~~~~~rPIIFaLSNPt~ 355 (496)
++++ +|++|=+-..+.. .-+++++.|.++++.-+|+-.|||..
T Consensus 64 ~~~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 120 (319)
T 1a5z_A 64 DLKG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120 (319)
T ss_dssp GGTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred HhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHH
Confidence 6665 8988744443321 12688889988888878888999973
No 81
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=91.55 E-value=0.53 Score=47.88 Aligned_cols=38 Identities=24% Similarity=0.482 Sum_probs=33.7
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 232 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 232 ~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+|++.||+|+|+|..|..+|..|+.+ |+ ++|.++|.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCC
Confidence 457889999999999999999999876 77 789999986
No 82
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.52 E-value=0.22 Score=50.55 Aligned_cols=96 Identities=23% Similarity=0.359 Sum_probs=59.5
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc----cCCCCCHH
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNLL 309 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~----~~~~~~L~ 309 (496)
+...+++|+|+|..|..+|+.+.. .|. +++++|++- .+ +...+..+... .....++.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l~ 224 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANIK 224 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHHH
Confidence 778999999999999999988764 263 588888741 11 11111111110 01123577
Q ss_pred HHhcccCCcEEEEccCCCC-----CCCHHHHHHHHccCCCceEEecCCC
Q 010990 310 DAVKVIKPTILIGSSGVGR-----TFTKEVIEAMASFNEKPLILALSNP 353 (496)
Q Consensus 310 e~v~~vkptvLIG~S~~~g-----~Ft~evv~~M~~~~~rPIIFaLSNP 353 (496)
++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 225 ~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 225 KSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 78875 999999876543 46899999885 34566666644
No 83
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=91.43 E-value=1.2 Score=46.48 Aligned_cols=113 Identities=22% Similarity=0.252 Sum_probs=80.3
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeEeeeCCCccHHH---HHHHHc---CCC-c---eeecC----------CCchhHH
Q 010990 159 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TTH-L---VFNDD----------IQGTASV 218 (496)
Q Consensus 159 ~g~~y~~~vdefv~av~~~fGp~~li~~EDf~~~~af~---iL~~yr---~~~-~---~FnDD----------iQGTa~V 218 (496)
+.+|-..|...|++++.+.-||..-|-=+|++.. ... +.+.|. ... + ++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 4556677889999999998899888888999873 222 235552 221 2 33222 1236655
Q ss_pred HHHHHHHHHHHhCCC-cccceEEEeCcChHHHHHHHHHHH-HHHHhcCCChhhhcCcEEEE-cCCCccc
Q 010990 219 VLAGVVAALKLIGGT-LAEHRFLFLGAGEAGTGIAELIAL-EISKQTKAPVEETRKKICLV-DSKGLIV 284 (496)
Q Consensus 219 ~LAgll~Alr~~g~~-l~d~riv~~GAG~Ag~GiA~ll~~-~~~~~~G~~~eeA~~~i~~v-D~~GLi~ 284 (496)
+.-++..+++..|.+ |+..++.|.|.|..|..+|+++.. . |+ +++.+ |+.|-++
T Consensus 194 v~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~-----G~-------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSEDF-----GM-------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHTT-----CC-------EEEEEECSSCEEE
T ss_pred HHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHhc-----CC-------EEEEEeCCCcccc
Confidence 666778888889999 999999999999999999998865 3 64 35544 8877544
No 84
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=91.23 E-value=1.5 Score=43.81 Aligned_cols=140 Identities=14% Similarity=0.122 Sum_probs=86.2
Q ss_pred eEeeeCCCccHHHHHHHHcCCCceeecCCCc---hhHHHHHHHHHHHHHh---------------------CCCcccceE
Q 010990 184 IQFEDFANHNAFELLAKYGTTHLVFNDDIQG---TASVVLAGVVAALKLI---------------------GGTLAEHRF 239 (496)
Q Consensus 184 i~~EDf~~~~af~iL~~yr~~~~~FnDDiQG---Ta~V~LAgll~Alr~~---------------------g~~l~d~ri 239 (496)
|+.-..+..|- .+-.--+..+++.|----. +|=-+++.+|+..|-. |..|.+.+|
T Consensus 80 I~~~~~G~d~i-d~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~v 158 (330)
T 2gcg_A 80 ISTMSVGIDHL-ALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTV 158 (330)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEE
T ss_pred EEECCcccccc-cHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEE
Confidence 66666555552 1111113578888864433 3444788888887722 356889999
Q ss_pred EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcE
Q 010990 240 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTI 319 (496)
Q Consensus 240 v~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptv 319 (496)
.|+|.|..|..+|+.+.. .|. +++.+|+.. .+ ....+ .+ ... ..++.|+++. +|+
T Consensus 159 gIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~-~~--g~~-~~~l~e~l~~--aDv 213 (330)
T 2gcg_A 159 GIIGLGRIGQAIARRLKP-----FGV-------QRFLYTGRQ----PR---PEEAA-EF--QAE-FVSTPELAAQ--SDF 213 (330)
T ss_dssp EEECCSHHHHHHHHHHGG-----GTC-------CEEEEESSS----CC---HHHHH-TT--TCE-ECCHHHHHHH--CSE
T ss_pred EEECcCHHHHHHHHHHHH-----CCC-------EEEEECCCC----cc---hhHHH-hc--Cce-eCCHHHHHhh--CCE
Confidence 999999999999998854 264 588888641 11 11111 11 001 1278888886 898
Q ss_pred EEEccC----CCCCCCHHHHHHHHccCCCceEEecCC
Q 010990 320 LIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 352 (496)
Q Consensus 320 LIG~S~----~~g~Ft~evv~~M~~~~~rPIIFaLSN 352 (496)
++=.-. ..+.++++.++.|. +..++.-.|+
T Consensus 214 Vi~~vp~~~~t~~~i~~~~~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 214 IVVACSLTPATEGLCNKDFFQKMK---ETAVFINISR 247 (330)
T ss_dssp EEECCCCCTTTTTCBSHHHHHHSC---TTCEEEECSC
T ss_pred EEEeCCCChHHHHhhCHHHHhcCC---CCcEEEECCC
Confidence 874321 13567788888874 4567776665
No 85
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=91.16 E-value=2.4 Score=42.45 Aligned_cols=121 Identities=14% Similarity=0.161 Sum_probs=77.1
Q ss_pred CCCceeecCCCch---hHHHHHHHHHHHHHh-------------------------CCCcccceEEEeCcChHHHHHHHH
Q 010990 203 TTHLVFNDDIQGT---ASVVLAGVVAALKLI-------------------------GGTLAEHRFLFLGAGEAGTGIAEL 254 (496)
Q Consensus 203 ~~~~~FnDDiQGT---a~V~LAgll~Alr~~-------------------------g~~l~d~riv~~GAG~Ag~GiA~l 254 (496)
..+.+.|----.+ |=-+++.+|+..|-. +..|...+|.|+|.|..|..+|..
T Consensus 89 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~ 168 (334)
T 2dbq_A 89 RGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKR 168 (334)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHH
Confidence 4566666543333 334678888876621 356889999999999999999998
Q ss_pred HHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc-CC---CCCC
Q 010990 255 IALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS-GV---GRTF 330 (496)
Q Consensus 255 l~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S-~~---~g~F 330 (496)
+... |. +++.+|+.. +. .....+ .-...++.++++. +|+++=.- .. .+.+
T Consensus 169 l~~~-----G~-------~V~~~d~~~-------~~--~~~~~~---g~~~~~l~~~l~~--aDvVil~vp~~~~t~~~i 222 (334)
T 2dbq_A 169 AKGF-----NM-------RILYYSRTR-------KE--EVEREL---NAEFKPLEDLLRE--SDFVVLAVPLTRETYHLI 222 (334)
T ss_dssp HHHT-----TC-------EEEEECSSC-------CH--HHHHHH---CCEECCHHHHHHH--CSEEEECCCCCTTTTTCB
T ss_pred HHhC-----CC-------EEEEECCCc-------ch--hhHhhc---CcccCCHHHHHhh--CCEEEECCCCChHHHHhh
Confidence 8642 64 688888741 10 000011 0112478888886 89887432 21 2567
Q ss_pred CHHHHHHHHccCCCceEEecCC
Q 010990 331 TKEVIEAMASFNEKPLILALSN 352 (496)
Q Consensus 331 t~evv~~M~~~~~rPIIFaLSN 352 (496)
+++.++.|. +..++.-.|.
T Consensus 223 ~~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 223 NEERLKLMK---KTAILINIAR 241 (334)
T ss_dssp CHHHHHHSC---TTCEEEECSC
T ss_pred CHHHHhcCC---CCcEEEECCC
Confidence 788888884 5667777774
No 86
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.15 E-value=0.19 Score=47.85 Aligned_cols=99 Identities=14% Similarity=0.226 Sum_probs=61.6
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHH
Q 010990 232 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 311 (496)
Q Consensus 232 ~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~ 311 (496)
.++...||.|+|+|..|..+|..+... |. +.++++|++. +.+......+ ......++.|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~-------~~~~~~~~~~--g~~~~~~~~~~ 65 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTE-------ESARELAQKV--EAEYTTDLAEV 65 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSH-------HHHHHHHHHT--TCEEESCGGGS
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCH-------HHHHHHHHHc--CCceeCCHHHH
Confidence 345567999999999999999988653 54 2477887631 1111111111 00112467777
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010990 312 VKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 354 (496)
Q Consensus 312 v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt 354 (496)
++. +|++|= +..... .+++++.+.+.. +..+|.-+||-.
T Consensus 66 ~~~--~Dvvi~-av~~~~-~~~v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 66 NPY--AKLYIV-SLKDSA-FAELLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp CSC--CSEEEE-CCCHHH-HHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred hcC--CCEEEE-ecCHHH-HHHHHHHHHhhcCCCcEEEECCCCC
Confidence 764 898884 333333 388888887644 567888888854
No 87
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.06 E-value=0.36 Score=46.75 Aligned_cols=49 Identities=18% Similarity=0.269 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 220 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 220 LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
-.|++.+|+-.+.+++..+++|+|||.+|.++|..|... | .+++++|++
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~-----G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSL-----D-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHc-----C-------CEEEEEECC
Confidence 567788888888889999999999998888888777642 5 368888874
No 88
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=91.02 E-value=0.1 Score=55.10 Aligned_cols=127 Identities=13% Similarity=0.187 Sum_probs=77.6
Q ss_pred ceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc--c-cCC---CCCHH
Q 010990 237 HRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH--E-HEP---VNNLL 309 (496)
Q Consensus 237 ~riv~~GAG~A-g~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~--~-~~~---~~~L~ 309 (496)
.||.|+|||+. |.+++..|+.. ..++. ...++|+|.+-- +++.+.+.+....+.. . ... ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 59999999997 55555555431 13442 257999998520 0111111111122211 1 111 25788
Q ss_pred HHhcccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHccCCCceEEecCCCCC
Q 010990 310 DAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPTS 355 (496)
Q Consensus 310 e~v~~vkptvLIG~S~~~g~----------------------------------Ft~evv~~M~~~~~rPIIFaLSNPt~ 355 (496)
+++++ +|++|=+.+.++. .=+++++.|.++|+.-+|+=.|||.
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPv- 155 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPA- 155 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH-
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH-
Confidence 99998 9998866554421 1258889999999999999999996
Q ss_pred CCCCCHHHHhcccCCcEEEecC
Q 010990 356 QSECTAEEAYTWSKGRAIFASG 377 (496)
Q Consensus 356 ~~E~~peda~~~t~G~ai~AsG 377 (496)
-+..+-+++.+.-.-+|.+|
T Consensus 156 --divT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 156 --GMVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp --HHHHHHHHHHCCCCCEEECC
T ss_pred --HHHHHHHHHhCCCCCEEEeC
Confidence 34555565666433577665
No 89
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=90.98 E-value=0.19 Score=50.60 Aligned_cols=116 Identities=14% Similarity=0.252 Sum_probs=68.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 315 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 315 (496)
..||.|+|||+.|..+|-+|+.. ++ ...++++|.+-=-.++...+|.+. .+|..+..-..+-.+++++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNA-LPFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHH-HHhcCCeEEEECCHHHhCC-
Confidence 36999999999999988877542 44 258999998410000000001111 1222111001234677887
Q ss_pred CCcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcc
Q 010990 316 KPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 367 (496)
Q Consensus 316 kptvLIG~S~~~g~--------------Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~ 367 (496)
+|+.|=+.+.+.. .-+++++.|.++++.-+|+=.|||. -...+-+++.
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~ 138 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV---DILTYATWKL 138 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH---HHHHHHHHHH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH---HHHHHHHHHH
Confidence 9999865554422 1245677788889999999999996 3344444443
No 90
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=90.98 E-value=0.15 Score=50.48 Aligned_cols=113 Identities=17% Similarity=0.267 Sum_probs=67.8
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC--CCcccCCCcCCCchhchhhccccCC-CCCHHHHhc
Q 010990 238 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVK 313 (496)
Q Consensus 238 riv~~G-AG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~--~GLi~~~r~~~l~~~k~~~a~~~~~-~~~L~e~v~ 313 (496)
||+|.| +|..|..++..|+. .|+ ...+.++|. +-=-.++-..++.+... +..+..- .++ .++++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~-~~a~~ 69 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGG-YEDTA 69 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECC-GGGGT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCC-HHHhC
Confidence 899999 99999998887754 244 246999997 31000000001111110 1111000 023 56777
Q ss_pred ccCCcEEEEccCCCC---C-----------CCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcc
Q 010990 314 VIKPTILIGSSGVGR---T-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 367 (496)
Q Consensus 314 ~vkptvLIG~S~~~g---~-----------Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~ 367 (496)
+ +|++|=+.+.+. - .+++++++|.+++.+.+|+--|||. ....+-+++.
T Consensus 70 ~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv---~~~~~~~~~~ 132 (303)
T 1o6z_A 70 G--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV---DLLNRHLYEA 132 (303)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH---HHHHHHHHHH
T ss_pred C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH---HHHHHHHHHH
Confidence 6 999986665442 1 4567889999999999999999996 3444444444
No 91
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=90.97 E-value=0.61 Score=49.32 Aligned_cols=106 Identities=16% Similarity=0.280 Sum_probs=66.9
Q ss_pred cccceEEEeCcChH--HHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc---ccCCCCCH
Q 010990 234 LAEHRFLFLGAGEA--GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH---EHEPVNNL 308 (496)
Q Consensus 234 l~d~riv~~GAG~A--g~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~---~~~~~~~L 308 (496)
.++.||.|+|||+. |.|++..|+.. ..+ . ..++|+|.+- ++.+.+....+.+.+ .-....++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 34579999999995 78999888742 122 2 3899999861 110000000000111 01113689
Q ss_pred HHHhcccCCcEEEEccCCC---------------CC---------------------CCHHHHHHHHccCCCceEEecCC
Q 010990 309 LDAVKVIKPTILIGSSGVG---------------RT---------------------FTKEVIEAMASFNEKPLILALSN 352 (496)
Q Consensus 309 ~e~v~~vkptvLIG~S~~~---------------g~---------------------Ft~evv~~M~~~~~rPIIFaLSN 352 (496)
.||+++ +|.+|=.-.+| |. .-.++++.|.++++.-+++-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999998 89888444322 22 13577888889999999999999
Q ss_pred CC
Q 010990 353 PT 354 (496)
Q Consensus 353 Pt 354 (496)
|.
T Consensus 148 Pv 149 (450)
T 3fef_A 148 PM 149 (450)
T ss_dssp SH
T ss_pred ch
Confidence 97
No 92
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=90.72 E-value=0.33 Score=48.48 Aligned_cols=117 Identities=13% Similarity=0.252 Sum_probs=69.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc-cccCCCCCHHHHhc
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAVK 313 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a-~~~~~~~~L~e~v~ 313 (496)
...||.|+|||..|..+|-.|+.. |+ -..++++|.+-=..++....+.+. .++. .+..-..+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 446999999999999988876542 54 157999997510001100012221 2332 11000113467788
Q ss_pred ccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcc
Q 010990 314 VIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 367 (496)
Q Consensus 314 ~vkptvLIG~S~~~g~--------------Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~ 367 (496)
+ +|++|=+.+.+.. .=+++++.|.++++.-+|+=.|||. -...+-+++.
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv---~~~t~~~~k~ 136 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV---DILAYATWKF 136 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHH
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH---HHHHHHHHHH
Confidence 7 9998855554422 1246777788889999999999996 3344444443
No 93
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=90.59 E-value=0.38 Score=48.96 Aligned_cols=115 Identities=16% Similarity=0.156 Sum_probs=69.1
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 300 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~ 300 (496)
++.+++..+. +....++.|+|+|..|-.++..+... .+. ++++++|+. ..+ .....+.|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHHHh
Confidence 4566666553 24667999999999999888776543 243 678988874 111 2222223321
Q ss_pred c----cCCCCCHHHHhcccCCcEEEEccCCC---CCCCHHHHHHHHccCCCceEEecCC--CCCCCCCCHHH
Q 010990 301 E----HEPVNNLLDAVKVIKPTILIGSSGVG---RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAEE 363 (496)
Q Consensus 301 ~----~~~~~~L~e~v~~vkptvLIG~S~~~---g~Ft~evv~~M~~~~~rPIIFaLSN--Pt~~~E~~ped 363 (496)
. .....++.|+++. +|++|=+...+ ..|..+.++ +.=.|+.++- |. +-|+.++-
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l~------~G~~V~~vgs~~p~-~~El~~~~ 239 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDMLE------PGMHLNAVGGDCPG-KTELHADV 239 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGCC------TTCEEEECSCCBTT-BEEECHHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHcC------CCCEEEECCCCCCC-ceeeCHHH
Confidence 0 1123689999986 89998665533 124333222 3447777775 55 57776653
No 94
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=90.56 E-value=0.23 Score=49.75 Aligned_cols=115 Identities=11% Similarity=0.226 Sum_probs=67.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 316 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 316 (496)
.||.|+|||+.|..+|-+|+.. |+ -..++++|.+-=-.++....+.+. .+|..+..-..+-.+++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDA-QAFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGG-GGGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHH-HHhcCCeEEEECCHHHhCC--
Confidence 5999999999999988876543 44 268999998410000000012111 1232111001234577877
Q ss_pred CcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcc
Q 010990 317 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 367 (496)
Q Consensus 317 ptvLIG~S~~~g~--------------Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~ 367 (496)
+|+.|=+.+.+.. .-+++++.|.++++.-+|+=.|||. -...+-+++.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~ 134 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV---DILTYATWKF 134 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH---HHHHHHHHHH
Confidence 9999855544421 1245777778889999999999996 3344445444
No 95
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.55 E-value=0.56 Score=46.45 Aligned_cols=100 Identities=21% Similarity=0.313 Sum_probs=60.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCC----chhchhhcccc--CCCCCHHHH
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL----QHFKKPWAHEH--EPVNNLLDA 311 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l----~~~k~~~a~~~--~~~~~L~e~ 311 (496)
||.|+|||..|.++|..|... |+ -.+++++|.+- .+.+.+ .+....+.... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYESGPVGLFDTKVTGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhhhhcccCCcEEEECCCHHH-
Confidence 799999999999999887642 22 15799999862 111111 10000010010 01145655
Q ss_pred hcccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCceEEecCCCC
Q 010990 312 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 312 v~~vkptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
+++ +|++|=+-+.+ |- .-+++.+.|.++++.-+|+-.|||-
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 665 89887554332 21 1157778888888888888899996
No 96
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.55 E-value=0.31 Score=48.77 Aligned_cols=121 Identities=22% Similarity=0.370 Sum_probs=70.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcC----CCchhchhhccccC-CCCCHHHH
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHE-PVNNLLDA 311 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~----~l~~~k~~~a~~~~-~~~~L~e~ 311 (496)
.||.|+|||..|..+|-+|+. .|+ -..++++|.+ .++.+ .+.+.. +|.++.. ..++ .++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~ev~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~i~~~~-~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQT-----ANELVLIDVF----KEKAIGEAMDINHGL-PFMGQMSLYAGD-YSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-----SSEEEEECCC-------CCHHHHHHTTSC-CCTTCEEEC--C-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCC----hHHHHHHHHHHHHhH-HhcCCeEEEECC-HHH
Confidence 589999999999998887654 254 2579999985 22211 011110 1211110 0123 567
Q ss_pred hcccCCcEEEEccCCCCCC--------------CHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccC--CcEEEe
Q 010990 312 VKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFA 375 (496)
Q Consensus 312 v~~vkptvLIG~S~~~g~F--------------t~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~--G~ai~A 375 (496)
+++ +|+.|=+.+.+..- -+++++.|.++++.-+|+=.|||. -.+.+-+++.++ -+-+|.
T Consensus 72 ~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv---~~~~~~~~k~s~~p~~rviG 146 (318)
T 1y6j_A 72 VKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV---DIITYMIQKWSGLPVGKVIG 146 (318)
T ss_dssp GTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH---HHHHHHHHHHHTCCTTTEEE
T ss_pred hCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH---HHHHHHHHHHcCCCHHHEec
Confidence 776 99988555444211 168889999999999999999995 444445544431 123555
Q ss_pred cCC
Q 010990 376 SGS 378 (496)
Q Consensus 376 sGs 378 (496)
+|.
T Consensus 147 ~gt 149 (318)
T 1y6j_A 147 SGT 149 (318)
T ss_dssp CTT
T ss_pred cCC
Confidence 543
No 97
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.50 E-value=0.29 Score=47.50 Aligned_cols=49 Identities=24% Similarity=0.352 Sum_probs=39.8
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 220 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 220 LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
-.|++.+|+-.|..++..+++|+|||.+|-++|..|... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 467788888888889999999999999888888887642 4 468888874
No 98
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=90.34 E-value=0.16 Score=54.08 Aligned_cols=126 Identities=17% Similarity=0.253 Sum_probs=77.5
Q ss_pred cceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc-c--ccCC---CCCH
Q 010990 236 EHRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H--EHEP---VNNL 308 (496)
Q Consensus 236 d~riv~~GAG~A-g~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a-~--~~~~---~~~L 308 (496)
..||.|+|||+. +.++|..|+.. ..++. ...++|+|.+- ++.+.+.+....+. . .... ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55566665431 01442 25799999852 22111112222221 1 1111 2588
Q ss_pred HHHhcccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHccCCCceEEecCCCC
Q 010990 309 LDAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 309 ~e~v~~vkptvLIG~S~~~g~----------------------------------Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
.+++++ +|++|=+.+.++. .=+++++.|.++|+.-+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 899997 9998865554311 1358899999999999999999996
Q ss_pred CCCCCCHHHHhcccCCcEEEecC
Q 010990 355 SQSECTAEEAYTWSKGRAIFASG 377 (496)
Q Consensus 355 ~~~E~~peda~~~t~G~ai~AsG 377 (496)
-+..+-+++.+.-.-+|.+|
T Consensus 175 ---di~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 ---AIVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp ---HHHHHHHHHHSTTCCEEECC
T ss_pred ---HHHHHHHHHhCCCCCEEEeC
Confidence 34455555655433566664
No 99
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.21 E-value=0.26 Score=42.92 Aligned_cols=31 Identities=23% Similarity=0.401 Sum_probs=26.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 59999999999999999876 376 58888864
No 100
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=90.18 E-value=0.25 Score=54.26 Aligned_cols=37 Identities=27% Similarity=0.450 Sum_probs=33.6
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+|++.||+|+|||..|..+|..|+.+ |+ ++|.++|.+
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D 359 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 359 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 57889999999999999999999875 87 789999997
No 101
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=90.03 E-value=0.22 Score=53.09 Aligned_cols=124 Identities=15% Similarity=0.140 Sum_probs=75.4
Q ss_pred cceEEEeCcChHH--HHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc---cCC---CCC
Q 010990 236 EHRFLFLGAGEAG--TGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---HEP---VNN 307 (496)
Q Consensus 236 d~riv~~GAG~Ag--~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~---~~~---~~~ 307 (496)
..||.|+|||+.| .++|..|+.. .++ +...++|+|.+- .+.+........+... ... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 3589999999964 4446666531 122 136799999863 1111111111122111 111 257
Q ss_pred HHHHhcccCCcEEEEccCC---------------CCCCC-------------------------HHHHHHHHccCCCceE
Q 010990 308 LLDAVKVIKPTILIGSSGV---------------GRTFT-------------------------KEVIEAMASFNEKPLI 347 (496)
Q Consensus 308 L~e~v~~vkptvLIG~S~~---------------~g~Ft-------------------------~evv~~M~~~~~rPII 347 (496)
+.+++++ +|++|=+.+. .|.|. +++++.|.++|+.-+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8899987 9998855432 12322 6899999999999999
Q ss_pred EecCCCCCCCCCCHHHHhcccCCcEEEecC
Q 010990 348 LALSNPTSQSECTAEEAYTWSKGRAIFASG 377 (496)
Q Consensus 348 FaLSNPt~~~E~~peda~~~t~G~ai~AsG 377 (496)
+=.|||. -+..+-+.++..- -+|++|
T Consensus 149 i~~TNPv---di~t~~~~k~p~~-rviG~c 174 (480)
T 1obb_A 149 LQAANPI---FEGTTLVTRTVPI-KAVGFC 174 (480)
T ss_dssp EECSSCH---HHHHHHHHHHSCS-EEEEEC
T ss_pred EEeCCcH---HHHHHHHHHCCCC-cEEecC
Confidence 9999996 3445555555444 566654
No 102
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=89.97 E-value=2 Score=43.73 Aligned_cols=192 Identities=16% Similarity=0.121 Sum_probs=112.9
Q ss_pred CCCceeecCC---CchhHHHHHHHHHHHHHh---------------------CCCcccceEEEeCcChHHHHHHHHHHHH
Q 010990 203 TTHLVFNDDI---QGTASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 258 (496)
Q Consensus 203 ~~~~~FnDDi---QGTa~V~LAgll~Alr~~---------------------g~~l~d~riv~~GAG~Ag~GiA~ll~~~ 258 (496)
..|++.|--- +.+|=-+++-+|+..|-. |..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~ 195 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF 195 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC
Confidence 4667766542 234556788888877632 4678899999999999999999998642
Q ss_pred HHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHH
Q 010990 259 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEV 334 (496)
Q Consensus 259 ~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~ev 334 (496)
|+ +++.+|+... +.. .+.......+|.|+++. .|+++=.-- ..+.|+++.
T Consensus 196 -----G~-------~V~~~dr~~~---------~~~---~~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 196 -----GL-------AIHYHNRTRL---------SHA---LEEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp -----TC-------EEEEECSSCC---------CHH---HHTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred -----CC-------EEEEECCCCc---------chh---hhcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 64 5888887521 010 01111112589999986 898884322 236899999
Q ss_pred HHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCC-CCCcccCCeeeCccCcccccccchhhHHHHHhCC
Q 010990 335 IEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-FDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGA 413 (496)
Q Consensus 335 v~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsP-f~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a 413 (496)
++.|. +..|+.=.|+-..--|-.-.+|++ .|+.- +.|-. |.+ +- ...-.--+..|+.+-|=+|-....+
T Consensus 250 l~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~-gA~LDVf~~-EP-~~~~pL~~~~nvilTPHia~~t~e~-- 319 (345)
T 4g2n_A 250 IAKIP---EGAVVINISRGDLINDDALIEALR--SKHLF-AAGLDVFAN-EP-AIDPRYRSLDNIFLTPHIGSATHET-- 319 (345)
T ss_dssp HHHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEE-EEEESCCTT-TT-SCCTTGGGCTTEEECCSCTTCBHHH--
T ss_pred HhhCC---CCcEEEECCCCchhCHHHHHHHHH--hCCce-EEEecCCCC-CC-CCCchHHhCCCEEEcCccCcCCHHH--
Confidence 99995 677888888754223333334443 46533 22211 100 00 0001112456888888776422221
Q ss_pred cccCHHHHHHHHHHHHhccc
Q 010990 414 IRVHDDMLLAASEALAKQVT 433 (496)
Q Consensus 414 ~~itd~m~~aAA~aLA~~v~ 433 (496)
...|...+++-|.....
T Consensus 320 ---~~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 320 ---RDAMGWLLIQGIEALNQ 336 (345)
T ss_dssp ---HHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHHc
Confidence 24555566666665553
No 103
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.94 E-value=0.34 Score=48.46 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=34.6
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 232 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 232 ~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
++|++.||+|+|+|..|.-+|..|+.+ |+ .+|.++|.+
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D 69 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYD 69 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 469999999999999999999999876 77 789999987
No 104
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.90 E-value=1.4 Score=42.66 Aligned_cols=81 Identities=20% Similarity=0.197 Sum_probs=55.6
Q ss_pred eeeCCCccHHHHHHHHcC------CCceeecCCCchhHHHHHHHHHHHHHh-CCCcccceEEEeC-cChHHHHHHHHHHH
Q 010990 186 FEDFANHNAFELLAKYGT------THLVFNDDIQGTASVVLAGVVAALKLI-GGTLAEHRFLFLG-AGEAGTGIAELIAL 257 (496)
Q Consensus 186 ~EDf~~~~af~iL~~yr~------~~~~FnDDiQGTa~V~LAgll~Alr~~-g~~l~d~riv~~G-AG~Ag~GiA~ll~~ 257 (496)
++-..-..+.+++++-+. +..+|. |..|.- ..-.|++.+++-. +.+++..+++|.| +|.+|.+++..|.+
T Consensus 64 ~~G~~~~~~~~~~~~~~~~~~gavnt~~~~-~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~ 141 (287)
T 1lu9_A 64 VGGGDMAAGERVFEAVKKRFFGPFRVSCML-DSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAG 141 (287)
T ss_dssp EECSCHHHHHHHHHHHHHHCBTTBCCEEEE-CSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHH
T ss_pred EccchHHHHHHHHHHHHHhcCCCeEEEEec-CCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 454445577777777652 333444 455532 3456777788766 7788999999999 89999888888865
Q ss_pred HHHHhcCCChhhhcCcEEEEcCC
Q 010990 258 EISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 258 ~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.|. +++++|++
T Consensus 142 -----~G~-------~V~i~~R~ 152 (287)
T 1lu9_A 142 -----EGA-------EVVLCGRK 152 (287)
T ss_dssp -----TTC-------EEEEEESS
T ss_pred -----CcC-------EEEEEECC
Confidence 363 38888874
No 105
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.89 E-value=1.6 Score=41.06 Aligned_cols=92 Identities=11% Similarity=0.207 Sum_probs=61.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 315 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 315 (496)
..||.|+|+|..|..+|..|... |.. ...+++++|++ ..+ + ......++.|+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~----------~--g~~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN----------T--TLNYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS----------S--SSEECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc----------C--ceEEeCCHHHHHhc-
Confidence 35899999999999999988754 520 01368888874 111 0 00112467788876
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCC
Q 010990 316 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 355 (496)
Q Consensus 316 kptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~ 355 (496)
+|++| ++..+ ...+++++.+....+..+|+.++|..+
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 88777 33333 357888888876666678888888874
No 106
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=89.87 E-value=0.46 Score=46.30 Aligned_cols=100 Identities=12% Similarity=0.126 Sum_probs=57.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC--CCcccCC-CcCCCch-hchhhccccCCCC--CHHHH
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSS-RKDSLQH-FKKPWAHEHEPVN--NLLDA 311 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~--~GLi~~~-r~~~l~~-~k~~~a~~~~~~~--~L~e~ 311 (496)
||.|+|+|..|..+|..|... | .+++++|+ +.--.+. +...... +...+ ....... ++.|+
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~ 68 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTEILKSISAGREHPRLGVKL-NGVEIFWPEQLEKC 68 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHHHHHHHHTTCCBTTTTBCC-CSEEEECGGGHHHH
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHHHHHHHHHhCcCcccCccc-cceEEecHHhHHHH
Confidence 799999999999999988754 5 36888887 3210000 0000000 00000 0000113 67777
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCC
Q 010990 312 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 312 v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
++. +|++| ++..+ ...+++++.++...+..+|..++|-.
T Consensus 69 ~~~--~D~vi-~~v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 69 LEN--AEVVL-LGVST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp HTT--CSEEE-ECSCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred Hhc--CCEEE-EcCCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 775 88777 33333 25788888886533466888898865
No 107
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=89.85 E-value=3.4 Score=41.14 Aligned_cols=118 Identities=18% Similarity=0.166 Sum_probs=80.9
Q ss_pred CCCceeecCCCc---hhHHHHHHHHHHHHHh---------------------CCCcccceEEEeCcChHHHHHHHHHHHH
Q 010990 203 TTHLVFNDDIQG---TASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 258 (496)
Q Consensus 203 ~~~~~FnDDiQG---Ta~V~LAgll~Alr~~---------------------g~~l~d~riv~~GAG~Ag~GiA~ll~~~ 258 (496)
..+.+.|----. +|=-+++.+|+..|-. +..+.+.+|.|+|.|..|-.+|+.+...
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 166 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAF 166 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHC
Confidence 467777754333 3344688888876522 4568899999999999999999988642
Q ss_pred HHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHH
Q 010990 259 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEV 334 (496)
Q Consensus 259 ~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~ev 334 (496)
|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...+.++++.
T Consensus 167 -----G~-------~V~~~d~~~----~~---~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 167 -----GM-------RVVYHARTP----KP---LP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp -----TC-------EEEEECSSC----CS---SS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred -----CC-------EEEEECCCC----cc---cc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 64 588888741 11 11 1 13578898887 89888552 2235788888
Q ss_pred HHHHHccCCCceEEecCCCC
Q 010990 335 IEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 335 v~~M~~~~~rPIIFaLSNPt 354 (496)
++.|. +..++.=.|+-.
T Consensus 216 l~~mk---~ga~lin~srg~ 232 (311)
T 2cuk_A 216 LFAMK---RGAILLNTARGA 232 (311)
T ss_dssp HTTSC---TTCEEEECSCGG
T ss_pred HhhCC---CCcEEEECCCCC
Confidence 88774 677888888843
No 108
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=89.84 E-value=2.1 Score=42.95 Aligned_cols=138 Identities=10% Similarity=0.087 Sum_probs=89.5
Q ss_pred eEeeeCCCccHHHHHHHHcCCCceeecCCCch---hHHHHHHHHHHHHH-------------------hCCCcccceEEE
Q 010990 184 IQFEDFANHNAFELLAKYGTTHLVFNDDIQGT---ASVVLAGVVAALKL-------------------IGGTLAEHRFLF 241 (496)
Q Consensus 184 i~~EDf~~~~af~iL~~yr~~~~~FnDDiQGT---a~V~LAgll~Alr~-------------------~g~~l~d~riv~ 241 (496)
|+.--.+..|- .+-.--+..+.+.|---..+ |=-+++.+|+..|- .+..|.+.+|.|
T Consensus 73 I~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgI 151 (331)
T 1xdw_A 73 ILTRTAGTDHI-DKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGV 151 (331)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEE
T ss_pred EEEcccccccc-CHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEE
Confidence 66555555442 11111235677777643333 44478888887761 234588999999
Q ss_pred eCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEE
Q 010990 242 LGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILI 321 (496)
Q Consensus 242 ~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLI 321 (496)
+|.|..|..+|+.+... |+ +++.+|+.. .. . +. .++. ..+|.|+++. .|+++
T Consensus 152 iG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~ 203 (331)
T 1xdw_A 152 VGLGRIGRVAAQIFHGM-----GA-------TVIGEDVFE----IK-G-IE----DYCT----QVSLDEVLEK--SDIIT 203 (331)
T ss_dssp ECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----CC-S-CT----TTCE----ECCHHHHHHH--CSEEE
T ss_pred ECcCHHHHHHHHHHHHC-----CC-------EEEEECCCc----cH-H-HH----hccc----cCCHHHHHhh--CCEEE
Confidence 99999999999988642 64 588888742 11 1 11 1111 2478899986 89988
Q ss_pred Ec----cCCCCCCCHHHHHHHHccCCCceEEecCCC
Q 010990 322 GS----SGVGRTFTKEVIEAMASFNEKPLILALSNP 353 (496)
Q Consensus 322 G~----S~~~g~Ft~evv~~M~~~~~rPIIFaLSNP 353 (496)
=. ....+.++++.++.|. +..++.=+|.-
T Consensus 204 ~~~p~t~~t~~li~~~~l~~mk---~ga~lin~srg 236 (331)
T 1xdw_A 204 IHAPYIKENGAVVTRDFLKKMK---DGAILVNCARG 236 (331)
T ss_dssp ECCCCCTTTCCSBCHHHHHTSC---TTEEEEECSCG
T ss_pred EecCCchHHHHHhCHHHHhhCC---CCcEEEECCCc
Confidence 63 1223688999999885 56788888853
No 109
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=89.68 E-value=1.8 Score=43.02 Aligned_cols=120 Identities=16% Similarity=0.174 Sum_probs=78.5
Q ss_pred CCceeecCC---CchhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHh
Q 010990 204 THLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 262 (496)
Q Consensus 204 ~~~~FnDDi---QGTa~V~LAgll~Alr~------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~ 262 (496)
.+.+.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 89 gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~---- 164 (307)
T 1wwk_A 89 GIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANAL---- 164 (307)
T ss_dssp TCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHT----
T ss_pred CcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHC----
Confidence 455555322 22344467888877762 24578999999999999999999988642
Q ss_pred cCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-cCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHHH
Q 010990 263 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEA 337 (496)
Q Consensus 263 ~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evv~~ 337 (496)
|+ +++.+|+.. + . ..+.+ .-...+|.|+++. .|+++=.-- ..+.++++.++.
T Consensus 165 -G~-------~V~~~d~~~-------~---~---~~~~~~g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~ 221 (307)
T 1wwk_A 165 -GM-------NILLYDPYP-------N---E---ERAKEVNGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKL 221 (307)
T ss_dssp -TC-------EEEEECSSC-------C---H---HHHHHTTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHH
T ss_pred -CC-------EEEEECCCC-------C---h---hhHhhcCccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhc
Confidence 64 588888741 1 1 01111 0111378898886 898885421 235788999998
Q ss_pred HHccCCCceEEecCCC
Q 010990 338 MASFNEKPLILALSNP 353 (496)
Q Consensus 338 M~~~~~rPIIFaLSNP 353 (496)
|. +.-++.=.|.-
T Consensus 222 mk---~ga~lin~arg 234 (307)
T 1wwk_A 222 MK---KTAILINTSRG 234 (307)
T ss_dssp SC---TTCEEEECSCG
T ss_pred CC---CCeEEEECCCC
Confidence 85 56788878773
No 110
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=89.62 E-value=0.92 Score=44.94 Aligned_cols=113 Identities=16% Similarity=0.142 Sum_probs=64.3
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 300 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~ 300 (496)
++.+++..+. +....+|.|+|+|..|..++..+... .|. ++++++|+. ..+ .....+.+..
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~~---~~~l~~~~~~ 182 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KEN---AEKFADTVQG 182 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HHH---HHHHHHHSSS
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHhhC
Confidence 4555554442 45667999999999999998888653 244 578888863 111 1111111110
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCC-CCCCCHHHHHHHHccCCCceEEecCC--CCCCCCCCH
Q 010990 301 EHEPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASFNEKPLILALSN--PTSQSECTA 361 (496)
Q Consensus 301 ~~~~~~~L~e~v~~vkptvLIG~S~~-~g~Ft~evv~~M~~~~~rPIIFaLSN--Pt~~~E~~p 361 (496)
......++.|+++. +|++|=+... ...|.++ . ..+.-+|+.+|. |. .-|+.+
T Consensus 183 ~~~~~~~~~e~v~~--aDiVi~atp~~~~v~~~~---~---l~~g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 183 EVRVCSSVQEAVAG--ADVIITVTLATEPILFGE---W---VKPGAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp CCEECSSHHHHHTT--CSEEEECCCCSSCCBCGG---G---SCTTCEEEECCCCSTT-CCSBCH
T ss_pred CeEEeCCHHHHHhc--CCEEEEEeCCCCcccCHH---H---cCCCcEEEeCCCCCCC-ceeccH
Confidence 01124689999986 8988844321 1233331 1 224568888753 53 355554
No 111
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=89.61 E-value=0.33 Score=49.18 Aligned_cols=116 Identities=14% Similarity=0.243 Sum_probs=69.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 315 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 315 (496)
..||.|+|||..|..+|..|+.. |+- ..+.++|.+-=..++-.-+|.+. .+|.....-..+..+++++
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~-----~~~-----~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~- 76 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GIA-----QEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcC-
Confidence 46899999999999999888763 552 57999998411011000012221 1232111111233466776
Q ss_pred CCcEEEEccCCC---C-----CC------CHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcc
Q 010990 316 KPTILIGSSGVG---R-----TF------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 367 (496)
Q Consensus 316 kptvLIG~S~~~---g-----~F------t~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~ 367 (496)
+|++|=+.+.+ | +| -+++.+.|.++++.-+|+-.|||. .+..+-+++.
T Consensus 77 -aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv---di~t~~~~k~ 138 (326)
T 3vku_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV---DILTYATWKL 138 (326)
T ss_dssp -CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH---HHHHHHHHHH
T ss_pred -CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch---HHHHHHHHHh
Confidence 88877454433 1 23 258888999999999999999996 3444444443
No 112
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=89.56 E-value=0.48 Score=47.45 Aligned_cols=104 Identities=21% Similarity=0.293 Sum_probs=64.3
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchh-hccccCCCCCHHHHhcc
Q 010990 237 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-WAHEHEPVNNLLDAVKV 314 (496)
Q Consensus 237 ~riv~~G-AG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~-~a~~~~~~~~L~e~v~~ 314 (496)
.||+|.| +|..|..++..|+. .|+ ...++++|.+.- .+...+|.+...+ -.+......++.+++++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999999888753 354 246999996421 0000001110000 00000001257788887
Q ss_pred cCCcEEEEccCCCC--------------CCCHHHHHHHHccCCCceEEecCCCC
Q 010990 315 IKPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 315 vkptvLIG~S~~~g--------------~Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
+|++|=+.+.+. ..++++++.|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 899886655442 23667888888889889999999996
No 113
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.53 E-value=0.72 Score=48.77 Aligned_cols=102 Identities=11% Similarity=0.159 Sum_probs=63.6
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHH
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 311 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~ 311 (496)
.++..+|.|+|+|..|..+|..|... |. +++++|+. . +......+.+.. ......++.|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~----~---~~~~~l~~~~~~~gi~~~~s~~e~ 72 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRS----R---EKTEEVIAENPGKKLVPYYTVKEF 72 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS----H---HHHHHHHHHSTTSCEEECSSHHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCC----H---HHHHHHHhhCCCCCeEEeCCHHHH
Confidence 35678999999999999999998753 64 57777764 1 111111111100 01123578888
Q ss_pred hccc-CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010990 312 VKVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 354 (496)
Q Consensus 312 v~~v-kptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt 354 (496)
++.+ ++|++| ++-+.+...+++++.+.... +.-||.-+||-.
T Consensus 73 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 73 VESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 8753 488777 44444456788888887654 356888899865
No 114
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.48 E-value=0.29 Score=41.11 Aligned_cols=35 Identities=20% Similarity=0.369 Sum_probs=26.2
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
++..+|+|+|+|..|..+++.|.. .|. +++++|++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g~-------~v~~~d~~ 38 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MGH-------EVLAVDIN 38 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TTC-------CCEEEESC
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 455689999999999999988864 253 57888874
No 115
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=89.35 E-value=0.35 Score=50.54 Aligned_cols=124 Identities=12% Similarity=0.165 Sum_probs=77.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHH-hcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc---CCCCCHHHHh
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISK-QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH---EPVNNLLDAV 312 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~-~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~---~~~~~L~e~v 312 (496)
.||.|+|||+. .+..|+..+.. ..++. ...++|+|.+- +|.+..........+.. ...+++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999995 55555444443 23542 36799999852 22110111111111111 1125788999
Q ss_pred cccCCcEEEEccCCCC---------------CC-------------------CHHHHHHHHccCCCceEEecCCCCCCCC
Q 010990 313 KVIKPTILIGSSGVGR---------------TF-------------------TKEVIEAMASFNEKPLILALSNPTSQSE 358 (496)
Q Consensus 313 ~~vkptvLIG~S~~~g---------------~F-------------------t~evv~~M~~~~~rPIIFaLSNPt~~~E 358 (496)
++ +|+.|=..++++ .+ =.++++.|.++| .-+|+=.|||. -
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv---d 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS---G 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH---H
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH---H
Confidence 98 999997776653 22 258999999999 99999999996 3
Q ss_pred CCHHHHhcccCCcEEEecC
Q 010990 359 CTAEEAYTWSKGRAIFASG 377 (496)
Q Consensus 359 ~~peda~~~t~G~ai~AsG 377 (496)
+..+-+++.+.-.-+|.+|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 4555566666443577665
No 116
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.20 E-value=0.28 Score=47.97 Aligned_cols=102 Identities=14% Similarity=0.281 Sum_probs=61.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCc-hhchhhcccc--CCCCCHHHHh
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAHEH--EPVNNLLDAV 312 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~-~~k~~~a~~~--~~~~~L~e~v 312 (496)
..||.|+|||+.|..+|..|... |.. .+++++|++---.++ ..+. .+..++..+. ....+. +++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~-----g~~-----~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~-~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR-----GIA-----REIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDDP-EIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TCC-----SEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESCG-GGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CCC-----CEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCCH-HHh
Confidence 35899999999999999888642 531 479999986310000 0010 0111111110 000133 456
Q ss_pred cccCCcEEEEccCCCCCCCH----------------HHHHHHHccCCCceEEecCCCC
Q 010990 313 KVIKPTILIGSSGVGRTFTK----------------EVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 313 ~~vkptvLIG~S~~~g~Ft~----------------evv~~M~~~~~rPIIFaLSNPt 354 (496)
+. +|++|=+.+.+. .+ ++++.|.++++..+|+.++||.
T Consensus 74 ~~--aD~Vii~v~~~~--~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 74 RD--ADMVVITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPV 127 (319)
T ss_dssp TT--CSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred CC--CCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCch
Confidence 54 898875443332 23 8889998888888999999997
No 117
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=89.05 E-value=0.31 Score=53.38 Aligned_cols=38 Identities=26% Similarity=0.439 Sum_probs=33.8
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 232 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 232 ~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+|++.||+|+|||..|..+|..|+.+ |+ ++|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 468889999999999999999999865 77 799999987
No 118
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=89.01 E-value=1.1 Score=44.65 Aligned_cols=113 Identities=19% Similarity=0.171 Sum_probs=67.5
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 300 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~ 300 (496)
++.+++..+.. ....++.|+|+|..|-.+++.+... .+. ++++++|+. ..+ .....+.|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FDI------GEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CCc------cEEEEECCC----HHH---HHHHHHHHHh
Confidence 45566665543 3567999999999998888877653 233 678888874 221 2222222221
Q ss_pred ---ccCCCCCHHHHhcccCCcEEEEccCCC-CCCCHHHHHHHHccCCCceEEecC--CCCCCCCCCHHH
Q 010990 301 ---EHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALS--NPTSQSECTAEE 363 (496)
Q Consensus 301 ---~~~~~~~L~e~v~~vkptvLIG~S~~~-g~Ft~evv~~M~~~~~rPIIFaLS--NPt~~~E~~ped 363 (496)
+.. ..++.|++ . .|++|=+...+ ..++.+.+ .+.-.|+.++ +|. +-|+.++-
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~l------~~G~~V~~ig~~~p~-~~el~~~~ 230 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEWV------EEGTHINAIGADGPG-KQELDVEI 230 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGGC------CTTCEEEECSCCSTT-CCCBCHHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHHc------CCCeEEEECCCCCCC-ccccCHHH
Confidence 112 46888988 5 99998665432 23333222 2456888883 455 67777653
No 119
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=88.97 E-value=2.4 Score=43.19 Aligned_cols=195 Identities=14% Similarity=0.063 Sum_probs=112.6
Q ss_pred cCCCceeecCCCc---hhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcChHHHHHHHHHHHH
Q 010990 202 GTTHLVFNDDIQG---TASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 258 (496)
Q Consensus 202 r~~~~~FnDDiQG---Ta~V~LAgll~Alr~--------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~ 258 (496)
+..|.+.|----. +|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 107 ~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~ 186 (351)
T 3jtm_A 107 AAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPF 186 (351)
T ss_dssp HTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGG
T ss_pred hcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHC
Confidence 3567777753322 344578888888752 25679999999999999999999988642
Q ss_pred HHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHH
Q 010990 259 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEV 334 (496)
Q Consensus 259 ~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~ev 334 (496)
|+ +++.+|+... .....+ .. ......+|.|+++. .|+++=.- ...+.|+++.
T Consensus 187 -----G~-------~V~~~dr~~~-------~~~~~~-~~--g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~ 242 (351)
T 3jtm_A 187 -----GC-------NLLYHDRLQM-------APELEK-ET--GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKEL 242 (351)
T ss_dssp -----CC-------EEEEECSSCC-------CHHHHH-HH--CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHH
T ss_pred -----CC-------EEEEeCCCcc-------CHHHHH-hC--CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHH
Confidence 65 4887887521 010111 00 01123589999987 99988331 2235899999
Q ss_pred HHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCC--CcccCCeeeCccCcccccccchhhHHHHHhC
Q 010990 335 IEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFD--PFEYNGKVFVPGQANNAYIFPGFGLGLVISG 412 (496)
Q Consensus 335 v~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsPf~--pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~ 412 (496)
++.|. +..++.=.|+-...-|-.-.+|++ .|+.--|.--=|. |..-+ . .--+..|+.+-|=++-....++
T Consensus 243 l~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EP~~~~-~--pL~~~~nvilTPHia~~t~ea~ 314 (351)
T 3jtm_A 243 IGKLK---KGVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDVWDPQPAPKD-H--PWRYMPNQAMTPHTSGTTIDAQ 314 (351)
T ss_dssp HHHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTT-C--GGGTSTTBCCCCSCGGGSHHHH
T ss_pred HhcCC---CCCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCCCCCCCCCCC-C--hhhcCCCEEECCcCCCCCHHHH
Confidence 99996 678888888854223333334443 4654433222121 11000 0 0123457888887764443333
Q ss_pred CcccCHHHHHHHHHHHHhccc
Q 010990 413 AIRVHDDMLLAASEALAKQVT 433 (496)
Q Consensus 413 a~~itd~m~~aAA~aLA~~v~ 433 (496)
..|...+++-|.+...
T Consensus 315 -----~~~~~~~~~nl~~~~~ 330 (351)
T 3jtm_A 315 -----LRYAAGTKDMLERYFK 330 (351)
T ss_dssp -----HHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHc
Confidence 2233344444544443
No 120
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=88.96 E-value=2.2 Score=43.06 Aligned_cols=120 Identities=16% Similarity=0.209 Sum_probs=79.6
Q ss_pred CCCceeecCCCc---hhHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 010990 203 TTHLVFNDDIQG---TASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 260 (496)
Q Consensus 203 ~~~~~FnDDiQG---Ta~V~LAgll~Alr~-------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~ 260 (496)
..|.+.|----. +|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 109 ~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~--- 185 (333)
T 3ba1_A 109 KGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEA--- 185 (333)
T ss_dssp HTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHH---
Confidence 356666654333 334467777877653 2457889999999999999999998864
Q ss_pred HhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHH
Q 010990 261 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 336 (496)
Q Consensus 261 ~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evv~ 336 (496)
.|+ +++.+|+..- . .. .+ ....+|.|+++. .|+++=.-- ..+.++++.++
T Consensus 186 --~G~-------~V~~~dr~~~----~---~~----g~----~~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~~l~ 239 (333)
T 3ba1_A 186 --FDC-------PISYFSRSKK----P---NT----NY----TYYGSVVELASN--SDILVVACPLTPETTHIINREVID 239 (333)
T ss_dssp --TTC-------CEEEECSSCC----T---TC----CS----EEESCHHHHHHT--CSEEEECSCCCGGGTTCBCHHHHH
T ss_pred --CCC-------EEEEECCCch----h---cc----Cc----eecCCHHHHHhc--CCEEEEecCCChHHHHHhhHHHHh
Confidence 264 5888887521 1 11 01 012578898886 898874321 23578889999
Q ss_pred HHHccCCCceEEecCCCC
Q 010990 337 AMASFNEKPLILALSNPT 354 (496)
Q Consensus 337 ~M~~~~~rPIIFaLSNPt 354 (496)
.|. +..+|.-.|.-.
T Consensus 240 ~mk---~gailIn~srG~ 254 (333)
T 3ba1_A 240 ALG---PKGVLINIGRGP 254 (333)
T ss_dssp HHC---TTCEEEECSCGG
T ss_pred cCC---CCCEEEECCCCc
Confidence 985 567887777653
No 121
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=88.96 E-value=22 Score=37.07 Aligned_cols=195 Identities=12% Similarity=0.149 Sum_probs=120.5
Q ss_pred cCCCceeecCCC---chhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 010990 202 GTTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 260 (496)
Q Consensus 202 r~~~~~FnDDiQ---GTa~V~LAgll~Alr~------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~ 260 (496)
+..|++||.--- .+|=-++|.+|+..|- .+..|.+.++.|+|.|..|-.+|+.+...
T Consensus 101 ~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~-- 178 (416)
T 3k5p_A 101 KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL-- 178 (416)
T ss_dssp HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 468999987533 3455678888888763 14568899999999999999999988643
Q ss_pred HhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHH
Q 010990 261 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 336 (496)
Q Consensus 261 ~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evv~ 336 (496)
|+ +++.+|+..- .... -+ ....+|.|+++. .|+++=.-- ..+.|+++.++
T Consensus 179 ---G~-------~V~~yd~~~~--------~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~ 232 (416)
T 3k5p_A 179 ---GM-------TVRYYDTSDK--------LQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLR 232 (416)
T ss_dssp ---TC-------EEEEECTTCC--------CCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHH
T ss_pred ---CC-------EEEEECCcch--------hccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHh
Confidence 65 6888887411 1100 01 123689999987 998874321 23689999999
Q ss_pred HHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCC-CC--CcccCCeeeC-ccCcccccccchhhHHHHHhC
Q 010990 337 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-FD--PFEYNGKVFV-PGQANNAYIFPGFGLGLVISG 412 (496)
Q Consensus 337 ~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsP-f~--pv~~~G~~~~-p~Q~NN~~iFPGiglG~l~~~ 412 (496)
.|. +..++.=.|+-..--|-.-.+|+ ..|+. .+.|.. |+ |..-+..... --+..|+.+-|=+|-....+
T Consensus 233 ~mk---~gailIN~aRG~vvd~~aL~~aL--~~g~i-~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea- 305 (416)
T 3k5p_A 233 KMK---KGAFLINNARGSDVDLEALAKVL--QEGHL-AGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEA- 305 (416)
T ss_dssp HSC---TTEEEEECSCTTSBCHHHHHHHH--HTTSE-EEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHH-
T ss_pred hCC---CCcEEEECCCChhhhHHHHHHHH--HcCCc-cEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHH-
Confidence 995 67899988886533333333444 35664 333322 21 1111100001 13567899999887543332
Q ss_pred CcccCHHHHHHHHHHHHhccccc
Q 010990 413 AIRVHDDMLLAASEALAKQVTEE 435 (496)
Q Consensus 413 a~~itd~m~~aAA~aLA~~v~~e 435 (496)
-+.|...+++.|.+.....
T Consensus 306 ----~~~~~~~~~~nl~~~l~~g 324 (416)
T 3k5p_A 306 ----QERIGTEVTRKLVEYSDVG 324 (416)
T ss_dssp ----HHHHHHHHHHHHHHHHHHC
T ss_pred ----HHHHHHHHHHHHHHHHhhC
Confidence 2456666777777766433
No 122
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=88.72 E-value=0.56 Score=46.58 Aligned_cols=104 Identities=20% Similarity=0.288 Sum_probs=61.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc--CCCCCHHHHhcc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 314 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~--~~~~~L~e~v~~ 314 (496)
.||.|+|||..|.++|-.++. .|. . +++++|.+-=-.++...++.+...+..... ....++ +++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCC
Confidence 489999999999999998754 354 1 399999751000000000111110000010 011456 77877
Q ss_pred cCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCC
Q 010990 315 IKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 315 vkptvLIG~S~~~g~--------------Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
+|+.|=+.+.+.. .-+++.+.+.++++.-+|+--|||.
T Consensus 71 --aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv 122 (309)
T 1ur5_A 71 --SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 122 (309)
T ss_dssp --CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH
T ss_pred --CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch
Confidence 8998865544421 1247788888888888888889996
No 123
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.52 E-value=0.39 Score=49.03 Aligned_cols=95 Identities=18% Similarity=0.302 Sum_probs=60.3
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc----cCCCCCH
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 308 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~----~~~~~~L 308 (496)
.+...+++|+|+|..|..+|+.+... |. +++.+|++. .+ +...++.+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~-----Ga-------~V~~~d~~~----~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGM-----GA-------TVTVLDINI----DK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----HH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCeeEeccCCHHHH
Confidence 37789999999999999999888642 53 588888741 11 11111111110 0011357
Q ss_pred HHHhcccCCcEEEEccCCC-----CCCCHHHHHHHHccCCCceEEecC
Q 010990 309 LDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 309 ~e~v~~vkptvLIG~S~~~-----g~Ft~evv~~M~~~~~rPIIFaLS 351 (496)
.+.++. .|++|.+...+ ..++++.++.|. +.-+|.=+|
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va 268 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIA 268 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEe
Confidence 777875 99999876544 346888888885 344666555
No 124
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=88.44 E-value=0.44 Score=47.42 Aligned_cols=114 Identities=18% Similarity=0.215 Sum_probs=68.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc--CCCCCHHHHhccc
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKVI 315 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~--~~~~~L~e~v~~v 315 (496)
||.|+|||..|.++|.+|... |+ ...+.++|.+-=..++..-++.+....|-.+. ....+ .+++++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~- 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC-
Confidence 799999999999999887653 54 14799999852111100001211111121110 01135 788887
Q ss_pred CCcEEEEccCCC---CC-----C------CHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcc
Q 010990 316 KPTILIGSSGVG---RT-----F------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 367 (496)
Q Consensus 316 kptvLIG~S~~~---g~-----F------t~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~ 367 (496)
+|++|=+.+.+ |- | -+++.+.|.++++.-+|+-.|||. .....-+++.
T Consensus 70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv---d~~t~~~~k~ 131 (294)
T 1oju_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM---DVMTYIMWKE 131 (294)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH---HHHHHHHHHH
T ss_pred -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc---hHHHHHHHHh
Confidence 89887444433 31 1 246778888999999999999996 3444445443
No 125
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=88.41 E-value=1.5 Score=45.11 Aligned_cols=190 Identities=15% Similarity=0.081 Sum_probs=108.7
Q ss_pred CCCceeecCC---CchhHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcChHHHHHHHHHHHH
Q 010990 203 TTHLVFNDDI---QGTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 258 (496)
Q Consensus 203 ~~~~~FnDDi---QGTa~V~LAgll~Alr~---------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~ 258 (496)
..|.+.|--- +.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|-.+|+.+..
T Consensus 119 ~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~- 197 (365)
T 4hy3_A 119 RGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG- 197 (365)
T ss_dssp SCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-
T ss_pred CCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-
Confidence 4666666432 23455678888877762 1345789999999999999999998743
Q ss_pred HHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEc----cCCCCCCCHHH
Q 010990 259 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEV 334 (496)
Q Consensus 259 ~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~----S~~~g~Ft~ev 334 (496)
-|+ +++.+|+.. . .. ......-...+|.|+++. .|+++=. ....+.++++.
T Consensus 198 ----fG~-------~V~~~d~~~----~------~~--~~~~~g~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~ 252 (365)
T 4hy3_A 198 ----FRA-------RIRVFDPWL----P------RS--MLEENGVEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEA 252 (365)
T ss_dssp ----SCC-------EEEEECSSS----C------HH--HHHHTTCEECCHHHHHHS--CSEEEECSCSSCC---CCCHHH
T ss_pred ----CCC-------EEEEECCCC----C------HH--HHhhcCeeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHH
Confidence 254 578787641 0 00 000111112579999987 9998832 23346899999
Q ss_pred HHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCC-C--CCcccCCeeeCccCcccccccchhhHHHHHh
Q 010990 335 IEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-F--DPFEYNGKVFVPGQANNAYIFPGFGLGLVIS 411 (496)
Q Consensus 335 v~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsP-f--~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~ 411 (496)
++.|. +.-|+.=.|.-..--|-.-.+|+ ..|+.- | |.. | +|..-+ . .--+..|+.+-|=+|-....
T Consensus 253 l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~-a-aLDV~~~EPl~~~-~--pL~~~~nvilTPHia~~t~e- 321 (365)
T 4hy3_A 253 FSSMR---RGAAFILLSRADVVDFDALMAAV--SSGHIV-A-ASDVYPEEPLPLD-H--PVRSLKGFIRSAHRAGALDS- 321 (365)
T ss_dssp HHTSC---TTCEEEECSCGGGSCHHHHHHHH--HTTSSE-E-EESCCSSSSCCTT-C--GGGTCTTEEECCSCSSCCHH-
T ss_pred HhcCC---CCcEEEECcCCchhCHHHHHHHH--HcCCce-E-EeeCCCCCCCCCC-C--hhhcCCCEEECCccccCHHH-
Confidence 99996 67788888875422333333444 346543 3 311 1 111000 0 01245678888877643222
Q ss_pred CCcccCHHHHHHHHHHHHhccc
Q 010990 412 GAIRVHDDMLLAASEALAKQVT 433 (496)
Q Consensus 412 ~a~~itd~m~~aAA~aLA~~v~ 433 (496)
-...|...+++-|.....
T Consensus 322 ----~~~~~~~~~~~ni~~~~~ 339 (365)
T 4hy3_A 322 ----AFKKMGDMVLEDMDLMDR 339 (365)
T ss_dssp ----HHHHHHHHHHHHHHHHHT
T ss_pred ----HHHHHHHHHHHHHHHHHc
Confidence 234555566666666554
No 126
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=88.22 E-value=0.47 Score=44.32 Aligned_cols=93 Identities=13% Similarity=0.181 Sum_probs=57.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEE-EcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 315 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~-vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 315 (496)
.||.|+|+|..|..+|..|... |. ++.+ +|++ .+.+....+.+- .....+..++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~-------~~~~~~l~~~~g--~~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG-------PASLSSVTDRFG--ASVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC-------GGGGHHHHHHHT--TTEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC-------HHHHHHHHHHhC--CCcccChHHHHhc-
Confidence 5899999999999999988653 54 3555 5553 111222222221 0111344566765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCC
Q 010990 316 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 355 (496)
Q Consensus 316 kptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~ 355 (496)
+|++| ++..+ ...+++++.++. .+..+|+.+|||..
T Consensus 82 -aDvVi-lavp~-~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVPY-DSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESCG-GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeCCh-HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 88877 33333 456777777755 45669999999973
No 127
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=88.16 E-value=0.35 Score=46.57 Aligned_cols=38 Identities=24% Similarity=0.423 Sum_probs=32.9
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+|++.||+|+|+|..|..+|..|+.+ |+ ++|.++|.+-
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 46678999999999999999999875 76 6899999973
No 128
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=88.15 E-value=0.72 Score=45.43 Aligned_cols=98 Identities=15% Similarity=0.187 Sum_probs=59.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC--------cccCCCcCCCchhchhhccccCCCCCH
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--------LIVSSRKDSLQHFKKPWAHEHEPVNNL 308 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G--------Li~~~r~~~l~~~k~~~a~~~~~~~~L 308 (496)
.||.|+|+|+-|..+|..|... | .+++++|+.- +...++ ....++ + ++.....++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~--~~g~~~--~-~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSA--TLGDYT--F-RPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEET--TTCCEE--E-CCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeec--CCCcEE--E-eeeeeECCH
Confidence 4899999999999999988653 4 3688888753 111100 000000 0 000112455
Q ss_pred HHHhcccCCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCCC
Q 010990 309 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 355 (496)
Q Consensus 309 ~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt~ 355 (496)
.++.+ .+|++| ++... ..++++++.+.... +..+|+.+.|-..
T Consensus 66 ~~~~~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELET--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSS--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCC--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 55543 388877 55544 34678999997654 4568888999764
No 129
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.10 E-value=0.53 Score=46.58 Aligned_cols=95 Identities=21% Similarity=0.317 Sum_probs=57.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchh----hcc----ccCCCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----WAH----EHEPVNN 307 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~----~a~----~~~~~~~ 307 (496)
+.||.|+|+|+.|..+|..|..+ | .+++++|+..- + ....++. |-. ......+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~~----~---~~~l~~~g~~~~~~~~~~~~~~~~~ 74 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRKE----I---VDLINVSHTSPYVEESKITVRATND 74 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSHH----H---HHHHHHHSCBTTBTTCCCCSEEESC
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCHH----H---HHHHHHhCCcccCCCCeeeEEEeCC
Confidence 56999999999999999998763 5 36888887411 0 1111110 000 0011245
Q ss_pred HHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCC
Q 010990 308 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQ 356 (496)
Q Consensus 308 L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~~ 356 (496)
+.| ++. +|++| ++-.+ ...+++++.+.. +..+|..++|..+.
T Consensus 75 ~~~-~~~--aDvVi-l~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 75 LEE-IKK--EDILV-IAIPV-QYIREHLLRLPV--KPSMVLNLSKGIEI 116 (335)
T ss_dssp GGG-CCT--TEEEE-ECSCG-GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred HHH-hcC--CCEEE-EECCH-HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence 666 554 78665 33322 457778777654 56688889997643
No 130
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=88.04 E-value=2.6 Score=42.76 Aligned_cols=188 Identities=16% Similarity=0.155 Sum_probs=99.5
Q ss_pred CCCceeecCCC---chhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcChHHHHHHHHHHHHH
Q 010990 203 TTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 259 (496)
Q Consensus 203 ~~~~~FnDDiQ---GTa~V~LAgll~Alr~--------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~ 259 (496)
..|++.|---- .+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 115 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~-- 192 (340)
T 4dgs_A 115 RNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA-- 192 (340)
T ss_dssp TTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT--
T ss_pred CCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH--
Confidence 35666664322 2444577777777752 2457889999999999999999999864
Q ss_pred HHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHH
Q 010990 260 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVI 335 (496)
Q Consensus 260 ~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evv 335 (496)
.|+ +++.+|+.. .. .. .+ ....+|.|+++. .|+++=.-- ..+.++++.+
T Consensus 193 ---~G~-------~V~~~dr~~----~~--~~-----~~----~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l 245 (340)
T 4dgs_A 193 ---FGM-------SVRYWNRST----LS--GV-----DW----IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLL 245 (340)
T ss_dssp ---TTC-------EEEEECSSC----CT--TS-----CC----EECSSHHHHHHT--CSEEEECC----------CHHHH
T ss_pred ---CCC-------EEEEEcCCc----cc--cc-----Cc----eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHH
Confidence 265 588888742 11 00 11 113579999987 999884321 2357888999
Q ss_pred HHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCC--CCcccCCeeeCccCcccccccchhhHHHHHhCC
Q 010990 336 EAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPF--DPFEYNGKVFVPGQANNAYIFPGFGLGLVISGA 413 (496)
Q Consensus 336 ~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsPf--~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a 413 (496)
+.|. +.-++.=.|+-..--|-.-.+|++ .|+.-.|.=-=| +|.. +. .-=+..|+.+-|=+|-....+
T Consensus 246 ~~mk---~gailIN~aRG~vvde~aL~~aL~--~g~i~gA~LDVf~~EP~~-~~---~L~~~~nvilTPHia~~t~e~-- 314 (340)
T 4dgs_A 246 QALG---PEGIVVNVARGNVVDEDALIEALK--SGTIAGAGLDVFVNEPAI-RS---EFHTTPNTVLMPHQGSATVET-- 314 (340)
T ss_dssp HHTT---TTCEEEECSCC----------------CCSSEEEESCCSSSSSC-CS---HHHHSSSEEECSSCSSCCHHH--
T ss_pred hcCC---CCCEEEECCCCcccCHHHHHHHHH--cCCceEEEeCCcCCCCCC-cc---chhhCCCEEEcCcCCcCCHHH--
Confidence 9886 567888888855334444444543 344322211111 1110 00 112345777777665432221
Q ss_pred cccCHHHHHHHHHHHHhccc
Q 010990 414 IRVHDDMLLAASEALAKQVT 433 (496)
Q Consensus 414 ~~itd~m~~aAA~aLA~~v~ 433 (496)
...|...+++.|.....
T Consensus 315 ---~~~~~~~~~~nl~~~~~ 331 (340)
T 4dgs_A 315 ---RMAMGKLVLANLAAHFA 331 (340)
T ss_dssp ---HHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHHc
Confidence 23455555555555543
No 131
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=87.90 E-value=2 Score=43.78 Aligned_cols=146 Identities=13% Similarity=0.172 Sum_probs=91.9
Q ss_pred eeEeeeCCCccH-HHHHHHHcCCCceeecCCC---chhHHHHHHHHHHHHH--------------------hCCCcccce
Q 010990 183 LIQFEDFANHNA-FELLAKYGTTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHR 238 (496)
Q Consensus 183 li~~EDf~~~~a-f~iL~~yr~~~~~FnDDiQ---GTa~V~LAgll~Alr~--------------------~g~~l~d~r 238 (496)
+|+.-..+..|- ..-+.+.+..+.+.|---- .+|=-+++.+|+..|- .+..|.+.+
T Consensus 87 ~I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~t 166 (364)
T 2j6i_A 87 LVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKT 166 (364)
T ss_dssp EEEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCE
T ss_pred EEEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCE
Confidence 467666666653 2223332236777775332 3344478888888762 356799999
Q ss_pred EEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCc
Q 010990 239 FLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPT 318 (496)
Q Consensus 239 iv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkpt 318 (496)
|.|+|.|..|..+|+.+... |+ ++++.+|+... ..... ..+- .....+|.|+++. .|
T Consensus 167 vgIIG~G~IG~~vA~~l~~~-----G~------~~V~~~d~~~~-------~~~~~-~~~g--~~~~~~l~ell~~--aD 223 (364)
T 2j6i_A 167 IATIGAGRIGYRVLERLVPF-----NP------KELLYYDYQAL-------PKDAE-EKVG--ARRVENIEELVAQ--AD 223 (364)
T ss_dssp EEEECCSHHHHHHHHHHGGG-----CC------SEEEEECSSCC-------CHHHH-HHTT--EEECSSHHHHHHT--CS
T ss_pred EEEECcCHHHHHHHHHHHhC-----CC------cEEEEECCCcc-------chhHH-HhcC--cEecCCHHHHHhc--CC
Confidence 99999999999999988542 64 33888886421 01101 0110 0112478898886 89
Q ss_pred EEEEccCC----CCCCCHHHHHHHHccCCCceEEecCCCC
Q 010990 319 ILIGSSGV----GRTFTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 319 vLIG~S~~----~g~Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
+++=.--. .+.++++.++.|. +.-++.-.|+-.
T Consensus 224 vV~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~arG~ 260 (364)
T 2j6i_A 224 IVTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTARGA 260 (364)
T ss_dssp EEEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSCGG
T ss_pred EEEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCCCc
Confidence 98854221 2578888888885 567888888743
No 132
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=87.90 E-value=0.25 Score=49.26 Aligned_cols=114 Identities=18% Similarity=0.334 Sum_probs=66.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCC-CCCHHHHhccc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVKVI 315 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~-~~~L~e~v~~v 315 (496)
.||.|+|||+.|..+|-+|+. .|+ -..++++|.+-=-.++...+|.+ ..+|.++..- .++ .+++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~el~L~Di~~~k~~g~a~dl~~-~~~~~~~~~v~~~~-~~a~~~- 67 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALAL-----LGV-----AREVVLVDLDRKLAQAHAEDILH-ATPFAHPVWVWAGS-YGDLEG- 67 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHHT-TGGGSCCCEEEECC-GGGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCChhHHHHHHHHHHH-hHhhcCCeEEEECC-HHHhCC-
Confidence 389999999999998887654 244 25799999862000000001111 1122211100 123 567777
Q ss_pred CCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcc
Q 010990 316 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 367 (496)
Q Consensus 316 kptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~ 367 (496)
+|+.|=+.+.+ |- .-+++++.|.++++.-+|+=.|||. -...+-+++.
T Consensus 68 -aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~ 129 (310)
T 2xxj_A 68 -ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV---DVMTQVAYAL 129 (310)
T ss_dssp -EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHH
T ss_pred -CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch---HHHHHHHHHH
Confidence 89988544433 21 1246777788889999999999996 3344444443
No 133
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.89 E-value=0.74 Score=46.49 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
-.||.|+|||..|.|||..++.+ |+ ++.++|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 36899999999999999988764 76 58888864
No 134
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=87.80 E-value=0.53 Score=45.90 Aligned_cols=117 Identities=18% Similarity=0.225 Sum_probs=71.8
Q ss_pred HHhhhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHH-hhCCCeeeEeeeCCCccHHH
Q 010990 118 LYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQ-NYGEKVLIQFEDFANHNAFE 196 (496)
Q Consensus 118 Ly~~~gGi~P~~~lPi~LDvgTnn~~Ll~DplYlG~r~~R~~g~~y~~~vdefv~av~~-~fGp~~li~~EDf~~~~af~ 196 (496)
.|..+ |+| ..-+.+|+. .++| .++++.++. .|.+ ++..-=-..++++
T Consensus 33 ~~~~~-gi~---~~y~~~~~~--~~~l-----------------------~~~i~~l~~~~~~G---~nVtiP~k~~i~~ 80 (287)
T 1nvt_A 33 AFKDK-GLN---YVYVAFDVL--PENL-----------------------KYVIDGAKALGIVG---FNVTIPHKIEIMK 80 (287)
T ss_dssp HHHHT-TCC---EEEEEEECC--GGGG-----------------------GGHHHHHHHHTCCE---EEECTTSTTGGGG
T ss_pred HHHHc-CCC---cEEEEEEcC--HHHH-----------------------HHHHHHHHhCCCCE---EEEccCCHHHHHH
Confidence 55555 788 777888874 3433 566666654 4644 5443222233333
Q ss_pred HHHH-------HcC-CCceeecC-CCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCCh
Q 010990 197 LLAK-------YGT-THLVFNDD-IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPV 267 (496)
Q Consensus 197 iL~~-------yr~-~~~~FnDD-iQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~ 267 (496)
++++ ... +..+++|. ..|+- ....|++.+|+-.+.+++..+++|.|||.+|.++|..|.+ .|
T Consensus 81 ~~d~~~~~a~~igavnt~~~~~g~l~g~n-Td~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~-----~G--- 151 (287)
T 1nvt_A 81 YLDEIDKDAQLIGAVNTIKIEDGKAIGYN-TDGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK-----DN--- 151 (287)
T ss_dssp GCSEECHHHHHHTCCCEEEEETTEEEEEC-CHHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS-----SS---
T ss_pred HHHhcCHHHHHhCceeeEEeeCCEEEEec-CCHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHH-----CC---
Confidence 3331 111 23334443 24522 2678999999988889999999999999777777666643 23
Q ss_pred hhhcCcEEEEcCC
Q 010990 268 EETRKKICLVDSK 280 (496)
Q Consensus 268 eeA~~~i~~vD~~ 280 (496)
+++++|++
T Consensus 152 -----~V~v~~r~ 159 (287)
T 1nvt_A 152 -----NIIIANRT 159 (287)
T ss_dssp -----EEEEECSS
T ss_pred -----CEEEEECC
Confidence 68888874
No 135
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=87.73 E-value=0.72 Score=46.52 Aligned_cols=106 Identities=17% Similarity=0.323 Sum_probs=64.7
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCC---CCCHHH
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLD 310 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~---~~~L~e 310 (496)
++..||.|+|||..|.++|.+|+. .|+ + .+.++|.+-=..++-..+|.+. ..|...... ..+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~-----~~~----~--~v~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGL-----KEL----G--DVVLFDIAEGTPQGKGLDIAES-SPVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHh-----CCC----C--eEEEEeCCchhHHHHHHHHhch-hhhcCCCCEEEEeCCH-H
Confidence 456799999999999999988865 365 1 5999998521111000012111 112211111 1344 7
Q ss_pred HhcccCCcEEEEccCCC---CC-----C------CHHHHHHHHccCCCceEEecCCCC
Q 010990 311 AVKVIKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 311 ~v~~vkptvLIG~S~~~---g~-----F------t~evv~~M~~~~~rPIIFaLSNPt 354 (496)
++++ +|++|=+.+.+ |- | =+++++.|.++++.-+|+-.|||.
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv 127 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL 127 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc
Confidence 8887 89887544432 31 1 146778888899999999999996
No 136
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=87.67 E-value=5.3 Score=39.59 Aligned_cols=117 Identities=19% Similarity=0.236 Sum_probs=78.9
Q ss_pred CCCceeecCCCchhH---HHHHHHHHHHHHh-----------------CCCcccceEEEeCcChHHHHHHHHHHHHHHHh
Q 010990 203 TTHLVFNDDIQGTAS---VVLAGVVAALKLI-----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 262 (496)
Q Consensus 203 ~~~~~FnDDiQGTa~---V~LAgll~Alr~~-----------------g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~ 262 (496)
..+++.|----.+.+ -+++.+|+..|-. ...|.+.++.|+|.|..|-.+|+.+...
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~---- 146 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAAL---- 146 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHHT----
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHHC----
Confidence 467777743322333 4788888877632 1258899999999999999999988642
Q ss_pred cCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHHH
Q 010990 263 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAM 338 (496)
Q Consensus 263 ~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evv~~M 338 (496)
|+ +++.+|+..- .. .. ....+|.|+++. .|+++=.- ...+.++++.++.|
T Consensus 147 -G~-------~V~~~dr~~~---------~~---~~----~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~m 200 (303)
T 1qp8_A 147 -GA-------QVRGFSRTPK---------EG---PW----RFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLALM 200 (303)
T ss_dssp -TC-------EEEEECSSCC---------CS---SS----CCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred -CC-------EEEEECCCcc---------cc---Cc----ccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhhC
Confidence 64 5888887532 00 01 122578888886 89887542 22357888888887
Q ss_pred HccCCCceEEecCC
Q 010990 339 ASFNEKPLILALSN 352 (496)
Q Consensus 339 ~~~~~rPIIFaLSN 352 (496)
. +..++.=.|+
T Consensus 201 k---~gailin~sr 211 (303)
T 1qp8_A 201 A---EDAVFVNVGR 211 (303)
T ss_dssp C---TTCEEEECSC
T ss_pred C---CCCEEEECCC
Confidence 5 5678888887
No 137
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=87.66 E-value=1.4 Score=44.62 Aligned_cols=102 Identities=21% Similarity=0.190 Sum_probs=60.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccc----CCCcC--CCchhchhhccccCCCCCHH
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIV----SSRKD--SLQHFKKPWAHEHEPVNNLL 309 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~----~~r~~--~l~~~k~~~a~~~~~~~~L~ 309 (496)
..||.|+|+|+-|.++|..|.+. | .+++++|++--.. +.+.. .++..+ +........++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~--l~~~i~~t~d~~ 94 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHVDEMQAEGVNNRYLPNYP--FPETLKAYCDLK 94 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHHHHHHHHSSBTTTBTTCC--CCTTEEEESCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHHHHHHHcCCCcccCCCCc--cCCCeEEECCHH
Confidence 45899999999999999998753 5 3578888741100 00000 011110 000001125788
Q ss_pred HHhcccCCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCCC
Q 010990 310 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 355 (496)
Q Consensus 310 e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt~ 355 (496)
|+++. +|++| ++.+. .+.+++++.+..+. +..+|..++|-..
T Consensus 95 ea~~~--aDvVi-laVp~-~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 95 ASLEG--VTDIL-IVVPS-FAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHTT--CCEEE-ECCCH-HHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHhc--CCEEE-ECCCH-HHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 88876 78776 33332 36788888887654 4667888888653
No 138
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=87.58 E-value=0.54 Score=46.83 Aligned_cols=96 Identities=19% Similarity=0.372 Sum_probs=62.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc------ccCC---CCCH
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHEP---VNNL 308 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~------~~~~---~~~L 308 (496)
||.|+|||..|.++|-.++.. |+ ..++|+|.+ .++ +......+.+ .... ..+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~---~~g~~~dl~~~~~~~~~~~~i~~t~d~ 62 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGK---PQGEALDLAHAAAELGVDIRISGSNSY 62 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTH---HHHHHHHHHHHHHHHTCCCCEEEESCG
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhh---HHHHHHHHHHhhhhcCCCeEEEECCCH
Confidence 689999999999999777542 54 369999986 222 1111111111 0111 1455
Q ss_pred HHHhcccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCC
Q 010990 309 LDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 309 ~e~v~~vkptvLIG~S~~~g~--------------Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
+++++ +|+.|=+.+.+.. .-+++++.|.++++.-+|+=.|||.
T Consensus 63 -~a~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (308)
T 2d4a_B 63 -EDMRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV 119 (308)
T ss_dssp -GGGTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred -HHhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence 67877 9999866554431 1357888888889888777789996
No 139
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=87.57 E-value=0.75 Score=45.13 Aligned_cols=48 Identities=8% Similarity=0.155 Sum_probs=36.2
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.|+..+++-.|.. ...+++|+|||.+|-+++..|.. .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 4566666665554 56799999999999999888764 365 679988874
No 140
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=87.49 E-value=6.3 Score=40.82 Aligned_cols=192 Identities=16% Similarity=0.119 Sum_probs=111.3
Q ss_pred cCCCceeecCCC---chhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 010990 202 GTTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 260 (496)
Q Consensus 202 r~~~~~FnDDiQ---GTa~V~LAgll~Alr~------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~ 260 (496)
+..++++|---- .+|=-++|.+|+..|- .+..|.+.++.|+|-|..|..+|+.+...
T Consensus 90 ~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~-- 167 (404)
T 1sc6_A 90 KRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESL-- 167 (404)
T ss_dssp HTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHC--
Confidence 357888886543 3445578889988873 24679999999999999999999988643
Q ss_pred HhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHH
Q 010990 261 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 336 (496)
Q Consensus 261 ~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evv~ 336 (496)
|+ +++.+|+..- ..+. -++ ...+|.|+++. .|+++=.- ...+.|+++.++
T Consensus 168 ---G~-------~V~~~d~~~~------~~~~-----~~~---~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 221 (404)
T 1sc6_A 168 ---GM-------YVYFYDIENK------LPLG-----NAT---QVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEIS 221 (404)
T ss_dssp ---TC-------EEEEECSSCC------CCCT-----TCE---ECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHH
T ss_pred ---CC-------EEEEEcCCch------hccC-----Cce---ecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHh
Confidence 65 5888887421 1010 011 12578899987 89887441 123578899999
Q ss_pred HHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEe-----cCCCCCCcccCCeeeCccCcccccccchhhHHHHHh
Q 010990 337 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVIS 411 (496)
Q Consensus 337 ~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~A-----sGsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~ 411 (496)
.|. +.-++.=.|.=.---|-.-.+|+ ..|+.--| ..-|.++-+.- .-.--+..|+.+-|=+|-....+
T Consensus 222 ~mk---~ga~lIN~aRg~~vd~~aL~~aL--~~g~i~gA~lDVf~~EP~~~~~~~--~~pL~~~~nvilTPHi~~~T~ea 294 (404)
T 1sc6_A 222 LMK---PGSLLINASRGTVVDIPALADAL--ASKHLAGAAIDVFPTEPATNSDPF--TSPLAEFDNVLLTPHIGGSTQEA 294 (404)
T ss_dssp HSC---TTEEEEECSCSSSBCHHHHHHHH--HTTSEEEEEEEC---------CTT--TGGGTTCTTEEEECCCSCCSHHH
T ss_pred hcC---CCeEEEECCCChHHhHHHHHHHH--HcCCccEEEEeecCCCCCCccccc--cchhhcCCCEEECCCCCCCcHHH
Confidence 885 56788888864311221222333 34543211 11122100000 00011356889999876433222
Q ss_pred CCcccCHHHHHHHHHHHHhccc
Q 010990 412 GAIRVHDDMLLAASEALAKQVT 433 (496)
Q Consensus 412 ~a~~itd~m~~aAA~aLA~~v~ 433 (496)
...|...+++.|.+...
T Consensus 295 -----~~~~~~~~~~nl~~~l~ 311 (404)
T 1sc6_A 295 -----QENIGLEVAGKLIKYSD 311 (404)
T ss_dssp -----HHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHc
Confidence 23455566666666654
No 141
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=87.29 E-value=6.1 Score=39.62 Aligned_cols=123 Identities=16% Similarity=0.124 Sum_probs=83.4
Q ss_pred cCCCceeecCCCch---hHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 010990 202 GTTHLVFNDDIQGT---ASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 260 (496)
Q Consensus 202 r~~~~~FnDDiQGT---a~V~LAgll~Alr~------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~ 260 (496)
+..+.+.|----.+ |=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 91 ~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 168 (333)
T 1j4a_A 91 ELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGF-- 168 (333)
T ss_dssp HTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred hCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHC--
Confidence 35788888644343 33478888888772 23468899999999999999999988642
Q ss_pred HhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHH
Q 010990 261 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 336 (496)
Q Consensus 261 ~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evv~ 336 (496)
|+ +++.+|+.. . . . . ..++. ...+|.|+++. .|+++=.-. ..+.++++.++
T Consensus 169 ---G~-------~V~~~d~~~----~--~-~--~-~~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 169 ---GA-------KVITYDIFR----N--P-E--L-EKKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIA 223 (333)
T ss_dssp ---TC-------EEEEECSSC----C--H-H--H-HHTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHH
T ss_pred ---CC-------EEEEECCCc----c--h-h--H-HhhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHh
Confidence 64 588888742 1 1 0 1 11221 12478898886 898885421 23578889999
Q ss_pred HHHccCCCceEEecCCCC
Q 010990 337 AMASFNEKPLILALSNPT 354 (496)
Q Consensus 337 ~M~~~~~rPIIFaLSNPt 354 (496)
.|. +..++.-.|.-.
T Consensus 224 ~mk---~ga~lIn~arg~ 238 (333)
T 1j4a_A 224 KMK---QDVVIVNVSRGP 238 (333)
T ss_dssp HSC---TTEEEEECSCGG
T ss_pred hCC---CCcEEEECCCCc
Confidence 885 567888888754
No 142
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.22 E-value=1.9 Score=43.78 Aligned_cols=96 Identities=9% Similarity=0.175 Sum_probs=61.7
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-cCCCCCHHHHh
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 312 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e~v 312 (496)
++..||.|+|.|..|..+|..|... |. +++++|+. . + ....+++. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G~-------~V~v~dr~----~---~----~~~~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----GH-------ECVVYDLN----V---N----AVQALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC----H---H----HHHHHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCC----H---H----HHHHHHHCCCEEeCCHHHHH
Confidence 4467999999999999999998763 53 57777763 1 1 11122221 12236888888
Q ss_pred ccc-CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010990 313 KVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 354 (496)
Q Consensus 313 ~~v-kptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt 354 (496)
+.. +||++| ++-..+ -.+++++.+.... +.-||.-+||-.
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence 874 568877 333333 6788888876543 566888787743
No 143
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=87.19 E-value=0.39 Score=48.35 Aligned_cols=106 Identities=19% Similarity=0.279 Sum_probs=64.0
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCC--CCHHHHh
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAV 312 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~--~~L~e~v 312 (496)
+..||.|+|||..|.++|..|+. .|+ + .+.++|.+-=..++-..+|.+. ..+....... .+-.+++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~~~~~g~a~dL~~~-~~~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQGMPNGKALDLLQT-CPIEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHTT-HHHHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCChHHHHHHHHHHHhh-hhhcCCCcEEEEcCCHHHH
Confidence 45699999999999999988765 365 2 6999998521110000011111 1111111111 1224778
Q ss_pred cccCCcEEEEccCCC---CC-----C------CHHHHHHHHccCCCceEEecCCCC
Q 010990 313 KVIKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 313 ~~vkptvLIG~S~~~---g~-----F------t~evv~~M~~~~~rPIIFaLSNPt 354 (496)
++ +|++|=+.+.+ |- | -+++++.+.++++.-+|+-.|||.
T Consensus 72 ~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 125 (321)
T 3p7m_A 72 EN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL 125 (321)
T ss_dssp TT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred CC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 77 89887554433 21 1 257778888999998999999996
No 144
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=86.96 E-value=6.7 Score=39.83 Aligned_cols=121 Identities=14% Similarity=0.202 Sum_probs=82.9
Q ss_pred CCCceeecCCCc---hhHHHHHHHHHHHHH----------h----------CCCcccceEEEeCcChHHHHHHHHHHHHH
Q 010990 203 TTHLVFNDDIQG---TASVVLAGVVAALKL----------I----------GGTLAEHRFLFLGAGEAGTGIAELIALEI 259 (496)
Q Consensus 203 ~~~~~FnDDiQG---Ta~V~LAgll~Alr~----------~----------g~~l~d~riv~~GAG~Ag~GiA~ll~~~~ 259 (496)
..|.+.|----. +|=-+++-+|+..|- . +..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~- 170 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM- 170 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC-
Confidence 368888864333 444568888887761 2 3458899999999999999999998643
Q ss_pred HHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHH
Q 010990 260 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVI 335 (496)
Q Consensus 260 ~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evv 335 (496)
|+ +++.+|+.. . ... ...+. ..+|.|+++. .|+++=.-- ..+.|+++.+
T Consensus 171 ----G~-------~V~~~d~~~----~--~~~----~~~~~----~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 171 ----GA-------KVIAYDVAY----N--PEF----EPFLT----YTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp ----TC-------EEEEECSSC----C--GGG----TTTCE----ECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHH
T ss_pred ----CC-------EEEEECCCh----h--hhh----hcccc----ccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHH
Confidence 65 688888752 1 001 01111 1379999987 999885422 2468999999
Q ss_pred HHHHccCCCceEEecCCCC
Q 010990 336 EAMASFNEKPLILALSNPT 354 (496)
Q Consensus 336 ~~M~~~~~rPIIFaLSNPt 354 (496)
+.|. +..++.=.|.-.
T Consensus 224 ~~mk---~gailIN~aRg~ 239 (343)
T 2yq5_A 224 KEMK---KSAYLINCARGE 239 (343)
T ss_dssp HHSC---TTCEEEECSCGG
T ss_pred hhCC---CCcEEEECCCCh
Confidence 9995 677888888754
No 145
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=86.95 E-value=3.4 Score=40.96 Aligned_cols=175 Identities=13% Similarity=0.086 Sum_probs=104.9
Q ss_pred hhHHHHHHHHHHHHHh----------------CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 010990 215 TASVVLAGVVAALKLI----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 278 (496)
Q Consensus 215 Ta~V~LAgll~Alr~~----------------g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD 278 (496)
+|=-+++.+|+..|-. ...|.+.||.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 85 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 152 (290)
T 3gvx_A 85 VAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYT 152 (290)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEe
Confidence 3335666666666521 1358899999999999999999998754 65 688888
Q ss_pred CCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCceEEecCCCC
Q 010990 279 SKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 279 ~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
+.. .. ... ++ ...+|.|+++. .|+++=.- ...+.++++.++.|. +..++.=.|+-.
T Consensus 153 r~~----~~---~~~-----~~---~~~~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG~ 212 (290)
T 3gvx_A 153 RSS----VD---QNV-----DV---ISESPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARAD 212 (290)
T ss_dssp SSC----CC---TTC-----SE---ECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCGG
T ss_pred ccc----cc---ccc-----cc---ccCChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehhc
Confidence 752 11 111 11 23579999987 88887431 223578889888885 677888888744
Q ss_pred CCCCCCHHHHhcccCCcEEEecCCCC--CCcccCCeeeCccCcccccccchhhHHHHHhCCcccCHHHHHHHHHHHHhcc
Q 010990 355 SQSECTAEEAYTWSKGRAIFASGSPF--DPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQV 432 (496)
Q Consensus 355 ~~~E~~peda~~~t~G~ai~AsGsPf--~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~itd~m~~aAA~aLA~~v 432 (496)
..-|-.-.+|++ +|+.-.|.=--| +|. ..-=+..|+.+-|=++=| ....-.+.|...+++-|....
T Consensus 213 ~vd~~aL~~aL~--~g~i~ga~lDV~~~EP~------~pL~~~~nvilTPHiag~----~t~e~~~~~~~~~~~ni~~~~ 280 (290)
T 3gvx_A 213 VVSKPDMIGFLK--ERSDVWYLSDVWWNEPE------ITETNLRNAILSPHVAGG----MSGEIMDIAIQLAFENVRNFF 280 (290)
T ss_dssp GBCHHHHHHHHH--HCTTCEEEESCCTTTTS------CCSCCCSSEEECCSCSSC----BTTBCCHHHHHHHHHHHHHHT
T ss_pred ccCCcchhhhhh--hccceEEeeccccCCcc------cchhhhhhhhcCccccCC----ccchHHHHHHHHHHHHHHhhh
Confidence 222222233433 343322211111 111 111245688888877621 123445677777888777665
Q ss_pred c
Q 010990 433 T 433 (496)
Q Consensus 433 ~ 433 (496)
.
T Consensus 281 ~ 281 (290)
T 3gvx_A 281 E 281 (290)
T ss_dssp C
T ss_pred c
Confidence 4
No 146
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=86.81 E-value=0.47 Score=47.67 Aligned_cols=113 Identities=20% Similarity=0.291 Sum_probs=67.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCC--CCHHHHhccc
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVI 315 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~--~~L~e~v~~v 315 (496)
||.|+|||..|.++|..|+.. |+ ...+.++|.+-=..++..-+|.+. ..+....... .+..+++++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988764 55 157999998531111100012111 1111111111 244577877
Q ss_pred CCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhc
Q 010990 316 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 366 (496)
Q Consensus 316 kptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~ 366 (496)
+|++|=+.+.+ |- .-+++.+.+.++++..+|+-.|||. .....-+++
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv---d~~t~~~~k 130 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL---DVMTYVAYE 130 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH---HHHHHHHHH
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch---hHHHHHHHH
Confidence 89877444333 21 1256778888999999999999995 334444444
No 147
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=86.79 E-value=1.6 Score=40.54 Aligned_cols=80 Identities=16% Similarity=0.214 Sum_probs=49.7
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHH
Q 010990 232 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 311 (496)
Q Consensus 232 ~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~ 311 (496)
..+...||.|+|+|..|..+|..|... |. +++++|++ .. +
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g~-------~V~~~~~~--------~~--------------------~ 54 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----GH-------EVTYYGSK--------DQ--------------------A 54 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECTT--------CC--------------------C
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCC--------HH--------------------H
Confidence 346678999999999999999988653 53 68887753 11 2
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCC
Q 010990 312 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 355 (496)
Q Consensus 312 v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~ 355 (496)
++ ++|++| ++..+ ...+++++.+....+..+|.-+||+..
T Consensus 55 ~~--~aD~vi-~av~~-~~~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 55 TT--LGEIVI-MAVPY-PALAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp SS--CCSEEE-ECSCH-HHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred hc--cCCEEE-EcCCc-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 22 367665 22222 345677776654333678889999653
No 148
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=86.76 E-value=0.67 Score=48.17 Aligned_cols=95 Identities=18% Similarity=0.286 Sum_probs=51.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChh-hhcCcEEEEcCCC-------cccCCCcC--CCchhchhhccccCCCCC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVE-ETRKKICLVDSKG-------LIVSSRKD--SLQHFKKPWAHEHEPVNN 307 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~e-eA~~~i~~vD~~G-------Li~~~r~~--~l~~~k~~~a~~~~~~~~ 307 (496)
||.|+|||+=|+++|..|.+.-. +.... +-.=++|..|..= .|.+.|.+ -|+..+.+ ..-....+
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~---~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp--~~i~~t~d 110 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCK---GYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP--DNLVANPD 110 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHH---HCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC--SSEEEESC
T ss_pred eEEEECcCHHHHHHHHHHHHcCC---CccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC--CCcEEeCC
Confidence 99999999999999999987521 11000 0011467655430 12222211 12222111 00011257
Q ss_pred HHHHhcccCCcEEE-EccCCCCCCCHHHHHHHHccC
Q 010990 308 LLDAVKVIKPTILI-GSSGVGRTFTKEVIEAMASFN 342 (496)
Q Consensus 308 L~e~v~~vkptvLI-G~S~~~g~Ft~evv~~M~~~~ 342 (496)
|.|++++ +|++| .+.+ .|-+++++.+..+.
T Consensus 111 l~~al~~--ad~ii~avPs---~~~r~~l~~l~~~~ 141 (391)
T 4fgw_A 111 LIDSVKD--VDIIVFNIPH---QFLPRICSQLKGHV 141 (391)
T ss_dssp HHHHHTT--CSEEEECSCG---GGHHHHHHHHTTTS
T ss_pred HHHHHhc--CCEEEEECCh---hhhHHHHHHhcccc
Confidence 8888887 67665 3333 46788888886543
No 149
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=86.53 E-value=0.51 Score=47.42 Aligned_cols=116 Identities=16% Similarity=0.266 Sum_probs=70.0
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC--cccCCCcCCCchhchhhccccCCC--CCHH
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--LIVSSRKDSLQHFKKPWAHEHEPV--NNLL 309 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G--Li~~~r~~~l~~~k~~~a~~~~~~--~~L~ 309 (496)
.+..||.|+|||..|.++|..++. .|+ ..+.++|.+- -..++...++.+ ..++....... .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~-----~g~------~~v~l~D~~~~~~~~~g~a~dl~~-~~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQ-----KEL------ADVVLVDIPQLENPTKGKALDMLE-ASPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCGGGHHHHHHHHHHHHH-HHHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEeccchHHHHHHhhhhHHH-hhhhccCCCEEEEcCCH
Confidence 345799999999999999998875 254 3799999861 111111001221 12332111111 1124
Q ss_pred HHhcccCCcEEEEccCCC---CC-----C------CHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhc
Q 010990 310 DAVKVIKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 366 (496)
Q Consensus 310 e~v~~vkptvLIG~S~~~---g~-----F------t~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~ 366 (496)
+++++ +|+.|=+.+.+ |- | -+++.+.+.++++.-+|+-.|||. .....-+++
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv---d~~t~~~~k 139 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV---DAMTYSVFK 139 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH---HHHHHHHHH
Confidence 66776 99887554433 21 1 257888888999999999999995 444444444
No 150
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.48 E-value=1.3 Score=41.81 Aligned_cols=98 Identities=15% Similarity=0.234 Sum_probs=59.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 316 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 316 (496)
.||.|+|+|..|..+|..|... |.. ..++++++|++ . +.+...++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~----~---~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN----T---ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----H---HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC----H---HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 4899999999999999988753 531 12478888873 1 1122221111 11123678899987
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCCC
Q 010990 317 PTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 355 (496)
Q Consensus 317 ptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt~ 355 (496)
+|++| ++..+ .-.+++++.+.... +..+|...++-.+
T Consensus 64 aDvVi-lav~~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ADILI-LSIKP-DLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CSEEE-ECSCT-TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 88887 44433 45678888876544 4558877777664
No 151
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=86.34 E-value=1.2 Score=47.47 Aligned_cols=98 Identities=12% Similarity=0.171 Sum_probs=59.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhch-hhc-cccCCCCCHHHHhcc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 314 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~-~~a-~~~~~~~~L~e~v~~ 314 (496)
.+|.|+|+|..|.++|..|... |. +++++|+.- +.+..... ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~~-------~~~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRTQ-------SKVDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS-------HHHHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCCH-------HHHHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4899999999999999998763 64 578887641 11111111 000 001123578887765
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010990 315 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 354 (496)
Q Consensus 315 v-kptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt 354 (496)
+ +||++| ++-+.+...+++++.+.... +..||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 477766 44434345677777776554 346777788754
No 152
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=86.25 E-value=4.1 Score=40.88 Aligned_cols=91 Identities=14% Similarity=0.207 Sum_probs=60.4
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHH
Q 010990 232 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 311 (496)
Q Consensus 232 ~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~ 311 (496)
..|.+.+|.|+|.|..|..+|+.+.. .|. +++.+|+.. + - .....+- . ...+|.|+
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~-------~-~-~~~~~~g--~-~~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHR-------K-V-NVEKELK--A-RYMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC-------C-H-HHHHHHT--E-EECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCc-------c-h-hhhhhcC--c-eecCHHHH
Confidence 67999999999999999999998854 254 688888741 1 0 1001110 0 11378888
Q ss_pred hcccCCcEEEEccCC----CCCCCHHHHHHHHccCCCceEEecCC
Q 010990 312 VKVIKPTILIGSSGV----GRTFTKEVIEAMASFNEKPLILALSN 352 (496)
Q Consensus 312 v~~vkptvLIG~S~~----~g~Ft~evv~~M~~~~~rPIIFaLSN 352 (496)
++. +|+++=.-.. .+.++++.++.|. +. ++.-.|+
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~sr 236 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIGR 236 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECCC
Confidence 886 8988743221 2478888888884 45 7777774
No 153
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=86.05 E-value=2.1 Score=43.12 Aligned_cols=189 Identities=15% Similarity=0.243 Sum_probs=112.8
Q ss_pred CCCceeecCC---CchhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 010990 203 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 261 (496)
Q Consensus 203 ~~~~~FnDDi---QGTa~V~LAgll~Alr~------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~ 261 (496)
..|++.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~--- 159 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL--- 159 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC---
Confidence 5677777653 23444567777777652 25679999999999999999999998643
Q ss_pred hcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHH
Q 010990 262 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 337 (496)
Q Consensus 262 ~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evv~~ 337 (496)
|+ +++.+|+..- . .......+ ...+|.|+++. .|+++=.- ...+.|+++.++.
T Consensus 160 --G~-------~V~~~dr~~~----~---~~~~~~~~-----~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~ 216 (324)
T 3evt_A 160 --GM-------HVIGVNTTGH----P---ADHFHETV-----AFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQQ 216 (324)
T ss_dssp --TC-------EEEEEESSCC----C---CTTCSEEE-----EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHHT
T ss_pred --CC-------EEEEECCCcc----h---hHhHhhcc-----ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHhc
Confidence 65 6888887521 1 11111111 12468888887 89888431 2246899999998
Q ss_pred HHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEe-----cCCCCCCcccCCeeeCccCcccccccchhhHHHHHhC
Q 010990 338 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISG 412 (496)
Q Consensus 338 M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~A-----sGsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~ 412 (496)
|. +..++.=.|+-..--|-.-.+|++ +|+.-.| ..-|.|+ + ..-=+..|+.+-|=++-.
T Consensus 217 mk---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~---~---~pL~~~~nvilTPHia~~----- 280 (324)
T 3evt_A 217 TK---QQPMLINIGRGPAVDTTALMTALD--HHQLSMAALDVTEPEPLPT---D---HPLWQRDDVLITPHISGQ----- 280 (324)
T ss_dssp CC---SCCEEEECSCGGGBCHHHHHHHHH--TTSCSEEEESSCSSSSCCT---T---CGGGGCSSEEECCSCTTC-----
T ss_pred CC---CCCEEEEcCCChhhhHHHHHHHHH--hCCceEEEeCCCCCCCCCC---C---ChhhcCCCEEEcCccccC-----
Confidence 85 677888888744223333334443 3543221 1112111 0 001235688888876532
Q ss_pred CcccCHHHHHHHHHHHHhccc
Q 010990 413 AIRVHDDMLLAASEALAKQVT 433 (496)
Q Consensus 413 a~~itd~m~~aAA~aLA~~v~ 433 (496)
...-.+.|...+++-|.....
T Consensus 281 t~~~~~~~~~~~~~nl~~~l~ 301 (324)
T 3evt_A 281 IAHFRATVFPIFAANFAQFVK 301 (324)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHh
Confidence 122346677777777776654
No 154
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=86.04 E-value=1.2 Score=42.22 Aligned_cols=95 Identities=15% Similarity=0.110 Sum_probs=56.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhc---hhhccccCCCCCHHHHhcc
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---KPWAHEHEPVNNLLDAVKV 314 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k---~~~a~~~~~~~~L~e~v~~ 314 (496)
||.|+|+|..|..+|..|... |. +++++|+.- .+.+.+.... ..+- ......+ .++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~r~~----~~~~~l~~~~~~~~~~~-~~~~~~~-~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----GH-------EVQGWLRVP----QPYCSVNLVETDGSIFN-ESLTAND-PDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----CSEEEEEEECTTSCEEE-EEEEESC-HHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----CC-------CEEEEEcCc----cceeeEEEEcCCCceee-eeeeecC-ccccCC
Confidence 799999999999999988753 53 688888752 1111111100 0000 0000123 466765
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010990 315 IKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 354 (496)
Q Consensus 315 vkptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt 354 (496)
+|++| ++.... -.+++++.+.... +..+|..++|..
T Consensus 64 --~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLL-VTLKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEE-ECSCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEE-EEecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 88877 333333 3689999887654 456777789975
No 155
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=86.04 E-value=1.1 Score=44.54 Aligned_cols=113 Identities=18% Similarity=0.254 Sum_probs=68.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC--CCcccCCCcCCCchhchhhcc-ccC--C-CCCHHH
Q 010990 238 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAH-EHE--P-VNNLLD 310 (496)
Q Consensus 238 riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~--~GLi~~~r~~~l~~~k~~~a~-~~~--~-~~~L~e 310 (496)
||+|.|| |..|..++..|+. .|+ ...+.++|. +-=-.++-..++.+. .++.. +.. . ..++.+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~d~l~~ 70 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGLREDIYDA-LAGTRSDANIYVESDENLR 70 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHHHHHHHHH-HTTSCCCCEEEEEETTCGG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHHHHHHHHh-HHhcCCCeEEEeCCcchHH
Confidence 8999999 9999998887753 244 246899997 310000000002111 12221 100 0 123788
Q ss_pred HhcccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcc
Q 010990 311 AVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 367 (496)
Q Consensus 311 ~v~~vkptvLIG~S~~~g~--------------Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~ 367 (496)
++++ +|++|=+.+.+.. .+++++++|.+++ +.+|+--|||. ....+-+++.
T Consensus 71 al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv---~~~t~~~~k~ 135 (313)
T 1hye_A 71 IIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV---DVMTYKALVD 135 (313)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH---HHHHHHHHHH
T ss_pred HhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH---HHHHHHHHHh
Confidence 8887 9998866665421 3568889999999 99999999995 4444445443
No 156
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=85.98 E-value=1 Score=47.80 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=26.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.||.|+|+|..|.|||..++.+ |. +++++|++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-----GI-------ETFLVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECc
Confidence 6899999999999999998764 65 58888874
No 157
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=85.77 E-value=0.42 Score=48.10 Aligned_cols=89 Identities=21% Similarity=0.313 Sum_probs=53.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc----ccCCCCCHHHHh
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNLLDAV 312 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~----~~~~~~~L~e~v 312 (496)
-||+|+|||-.|--+|+.|.+ ..++.+.|+.. +.+...+ +++. +.....+|.+++
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~~-~~~~~~~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKVK-EFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHHT-TTSEEEECCTTCHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHHh-ccCCcEEEecCCHHHHHHHH
Confidence 379999999988777776632 13577777641 1122111 2221 112224688888
Q ss_pred cccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC
Q 010990 313 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 352 (496)
Q Consensus 313 ~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN 352 (496)
++ .|++|-+ .|..+..+++++-.+...+ ++-+|-
T Consensus 76 ~~--~DvVi~~--~p~~~~~~v~~~~~~~g~~--yvD~s~ 109 (365)
T 3abi_A 76 KE--FELVIGA--LPGFLGFKSIKAAIKSKVD--MVDVSF 109 (365)
T ss_dssp TT--CSEEEEC--CCGGGHHHHHHHHHHHTCE--EEECCC
T ss_pred hC--CCEEEEe--cCCcccchHHHHHHhcCcc--eEeeec
Confidence 76 8998854 4556788888887654443 555664
No 158
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=85.52 E-value=0.47 Score=47.94 Aligned_cols=116 Identities=15% Similarity=0.207 Sum_probs=69.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 314 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~ 314 (496)
-.||.|+|||..|..+|..|+.. |+- .++.++|.+-=..++-.-+|.+. .+|.. ...-..+-.+++++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~~-----~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GIT-----DELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CCC-----ceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 35899999999999999988753 552 57999997410000000012222 23321 10001122366776
Q ss_pred cCCcEEEEccCCC---CC-----C------CHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcc
Q 010990 315 IKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 367 (496)
Q Consensus 315 vkptvLIG~S~~~---g~-----F------t~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~ 367 (496)
+|++|=+.+.+ |- | -+++++.+.++++.-+|+-.|||. .+..+-+++.
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv---d~~t~~~~k~ 135 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV---DILTYATWKF 135 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHH
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH---HHHHHHHHHh
Confidence 89877444332 21 1 257788888999999999999996 3444445444
No 159
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=85.42 E-value=8.8 Score=38.48 Aligned_cols=121 Identities=17% Similarity=0.142 Sum_probs=82.8
Q ss_pred CCCceeecCCCch---hHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 010990 203 TTHLVFNDDIQGT---ASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 260 (496)
Q Consensus 203 ~~~~~FnDDiQGT---a~V~LAgll~Alr~-------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~ 260 (496)
..+.+.|---..+ |=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 167 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF-- 167 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 5778887544443 34478888887651 24578999999999999999999988643
Q ss_pred HhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHH
Q 010990 261 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 336 (496)
Q Consensus 261 ~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evv~ 336 (496)
|+ +++.+|+.. .. . .. .++. ..+|.|+++. .|+++=.-- ..+.|+++.++
T Consensus 168 ---G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 168 ---GA-------KVIAYDPYP----MK-G-DH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp ---TC-------EEEEECSSC----CS-S-CC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred ---CC-------EEEEECCCc----ch-h-hH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 64 588888752 11 1 11 1121 1378898886 898885421 23578999999
Q ss_pred HHHccCCCceEEecCCCC
Q 010990 337 AMASFNEKPLILALSNPT 354 (496)
Q Consensus 337 ~M~~~~~rPIIFaLSNPt 354 (496)
.|. +..++.=.|.-.
T Consensus 222 ~mk---~ga~lIn~srg~ 236 (333)
T 1dxy_A 222 LMK---PGAIVINTARPN 236 (333)
T ss_dssp HSC---TTEEEEECSCTT
T ss_pred hCC---CCcEEEECCCCc
Confidence 985 567888787754
No 160
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=85.15 E-value=0.93 Score=46.61 Aligned_cols=96 Identities=20% Similarity=0.322 Sum_probs=54.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-----------ccCCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-----------EHEPV 305 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-----------~~~~~ 305 (496)
.||+|+|||..|-.+|+.|.+ .|- .-.++.++|++ ..+ +......+.. +....
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LSK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HHH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HHH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 389999998777777666643 231 00368888874 111 2222222211 11112
Q ss_pred CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC
Q 010990 306 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 352 (496)
Q Consensus 306 ~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN 352 (496)
.++.++++..++|++|=+++. .+..+++++..+.. ..+| =+|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~~g-~~vv-D~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALP--YQDLTIMEACLRTG-VPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHHHT-CCEE-ESSC
T ss_pred HHHHHHHHhhCCCEEEECCCc--ccChHHHHHHHHhC-CCEE-EecC
Confidence 468888888889999977653 24566776655433 3444 2544
No 161
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=84.95 E-value=0.69 Score=46.89 Aligned_cols=37 Identities=27% Similarity=0.439 Sum_probs=33.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+|++.||+|+|+|..|.-||..|+.+ |+ ++|.++|.+
T Consensus 33 ~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 33 RLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 57788999999999999999999876 77 799999976
No 162
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=84.72 E-value=1.8 Score=43.64 Aligned_cols=188 Identities=15% Similarity=0.104 Sum_probs=109.7
Q ss_pred CCceeecCCC---chhHHHHHHHHHHHHH----------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcC
Q 010990 204 THLVFNDDIQ---GTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTK 264 (496)
Q Consensus 204 ~~~~FnDDiQ---GTa~V~LAgll~Alr~----------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G 264 (496)
.|++.|---- .+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+... |
T Consensus 89 gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G 163 (324)
T 3hg7_A 89 DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----G 163 (324)
T ss_dssp SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----T
T ss_pred CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----C
Confidence 4666664322 2334567777777662 25679999999999999999999998643 6
Q ss_pred CChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEc----cCCCCCCCHHHHHHHHc
Q 010990 265 APVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVIEAMAS 340 (496)
Q Consensus 265 ~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~----S~~~g~Ft~evv~~M~~ 340 (496)
+ +++.+|+.. +. ..... ......+|.|+++. .|+++=. ....+.|+++.++.|.
T Consensus 164 ~-------~V~~~dr~~---~~----~~~~~-----~~~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk- 221 (324)
T 3hg7_A 164 M-------KVLGVSRSG---RE----RAGFD-----QVYQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK- 221 (324)
T ss_dssp C-------EEEEECSSC---CC----CTTCS-----EEECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC-
T ss_pred C-------EEEEEcCCh---HH----hhhhh-----cccccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC-
Confidence 5 688888764 11 11111 01123578888886 8888743 1223578888888875
Q ss_pred cCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEe-----cCCCCCCcccCCeeeCccCcccccccchhhHHHHHhCCcc
Q 010990 341 FNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIR 415 (496)
Q Consensus 341 ~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~A-----sGsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~ 415 (496)
+..|+.=.|+-..--|-.-.+|++ .|+.-.| ..-|.|+- . .--+..|+.+-|=++-. +
T Consensus 222 --~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EPl~~~----~--pL~~~~nvilTPHia~~------t- 284 (324)
T 3hg7_A 222 --PGAILFNVGRGNAINEGDLLTALR--TGKLGMAVLDVFEQEPLPAD----S--PLWGQPNLIITPHNSAY------S- 284 (324)
T ss_dssp --TTCEEEECSCGGGBCHHHHHHHHH--TTSSSEEEESCCSSSSCCTT----C--TTTTCTTEEECCSCSSC------C-
T ss_pred --CCcEEEECCCchhhCHHHHHHHHH--cCCceEEEeccCCCCCCCCC----C--hhhcCCCEEEeCCCccc------c-
Confidence 677888887744222322333432 3442111 11122110 0 01135688888877532 2
Q ss_pred cCHHHHHHHHHHHHhccccc
Q 010990 416 VHDDMLLAASEALAKQVTEE 435 (496)
Q Consensus 416 itd~m~~aAA~aLA~~v~~e 435 (496)
....|...+++-|.....-+
T Consensus 285 ~~~~~~~~~~~nl~~~~~G~ 304 (324)
T 3hg7_A 285 FPDDVAQIFVRNYIRFIDGQ 304 (324)
T ss_dssp CHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 23567777777777765433
No 163
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=84.72 E-value=0.86 Score=48.10 Aligned_cols=99 Identities=14% Similarity=0.140 Sum_probs=63.1
Q ss_pred HHHHHHHHHHhhCCCeeeEeeeCCCccHHHHHHHHc-CCCcee--ecCCCchhHHHHHHHHHHHHHhCC--------Ccc
Q 010990 167 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYG-TTHLVF--NDDIQGTASVVLAGVVAALKLIGG--------TLA 235 (496)
Q Consensus 167 vdefv~av~~~fGp~~li~~EDf~~~~af~iL~~yr-~~~~~F--nDDiQGTa~V~LAgll~Alr~~g~--------~l~ 235 (496)
+..+++.+...+ ++ |.++-+....-.++-++|. ..+|++ |+..-+.+.....-++..+..... .-.
T Consensus 135 ~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~ 211 (521)
T 1hyu_A 135 VVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD 211 (521)
T ss_dssp HHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSC
T ss_pred HHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccC
Confidence 455666666667 44 5555444445567888885 467644 555556666666666665433210 123
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
..+|+|+|+|.||+..|..+.. .|+ ++.++|++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4579999999999999988765 364 57777753
No 164
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=84.62 E-value=1.8 Score=42.65 Aligned_cols=109 Identities=13% Similarity=0.179 Sum_probs=63.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhch-----hhccc---c---CC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-----PWAHE---H---EP 304 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~-----~~a~~---~---~~ 304 (496)
..||.|+|+|..|..+|..|... |........+++++|++.-.. .+ +.....++ .|-.. . ..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~-----g~~~~~~~~~V~~~~r~~~~~-~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN-----AAQLAQFDPRVTMWVFEEDIG-GK-KLTEIINTQHENVKYLPGHKLPPNVVA 80 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----HHHCTTEEEEEEEECCCCBSS-SS-BHHHHHHHHSCCTTTSTTCCCCTTEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-----CCcccCCCCeEEEEEcChhhh-hh-HHHHHHHhcCcccccCCcccCccCeEE
Confidence 35899999999999999999764 310000013688888753211 00 00111100 01000 0 01
Q ss_pred CCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCCC
Q 010990 305 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 355 (496)
Q Consensus 305 ~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt~ 355 (496)
..++.|+++. +|++| ++... ...+++++.+.... +..+|..++|-..
T Consensus 81 ~~~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 81 VPDVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp ESSHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred EcCHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 2468888875 88777 44433 46789999887654 4678899999654
No 165
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=84.54 E-value=5.7 Score=40.04 Aligned_cols=168 Identities=13% Similarity=0.069 Sum_probs=90.5
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHH
Q 010990 231 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 310 (496)
Q Consensus 231 g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e 310 (496)
+..|.+.+|.|+|.|..|-.+|+.+... .|+ +++.+|+..- .....+ .+ ......++.|
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~~-------~~~~~~-~~--g~~~~~~l~e 216 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAPA-------DAETEK-AL--GAERVDSLEE 216 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSCC-------CHHHHH-HH--TCEECSSHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCCc-------chhhHh-hc--CcEEeCCHHH
Confidence 5678999999999999999999988522 264 5888887421 111111 00 0011247888
Q ss_pred HhcccCCcEEEEccC----CCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCCcccC
Q 010990 311 AVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYN 386 (496)
Q Consensus 311 ~v~~vkptvLIG~S~----~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsPf~pv~~~ 386 (496)
+++. +|+++=.-. ..+.++++.++.|. +..+|.-.|+-...-|-.-.+|++ +|+ |.+.|..+-..+-.
T Consensus 217 ll~~--aDvVil~vp~~~~t~~li~~~~l~~mk---~gailin~srg~~vd~~aL~~aL~--~~~-i~gaglDv~~~EP~ 288 (348)
T 2w2k_A 217 LARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTARGPVISQDALIAALK--SGK-LLSAGLDVHEFEPQ 288 (348)
T ss_dssp HHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHHH--TTS-EEEEEESSCTTTTS
T ss_pred Hhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC---CCCEEEECCCCchhCHHHHHHHHH--hCC-ceEEEeccCCCCCC
Confidence 8886 898874421 23678888888884 566777666643112222334443 455 33333322111100
Q ss_pred CeeeCccCcccccccchhhHHHHHhCCcccCHHHHHHHHHHHHhccc
Q 010990 387 GKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVT 433 (496)
Q Consensus 387 G~~~~p~Q~NN~~iFPGiglG~l~~~a~~itd~m~~aAA~aLA~~v~ 433 (496)
. ...--+..|+.+-|=++-.... -...|...+++.|.....
T Consensus 289 ~-~~~L~~~~nviltPH~~~~t~e-----~~~~~~~~~~~ni~~~~~ 329 (348)
T 2w2k_A 289 V-SKELIEMKHVTLTTHIGGVAIE-----TFHEFERLTMTNIDRFLL 329 (348)
T ss_dssp C-CHHHHTSSSEEECCSCTTCSHH-----HHHHHHHHHHHHHHHHHH
T ss_pred C-CchhhcCCCEEEcCcCCCCCHH-----HHHHHHHHHHHHHHHHHc
Confidence 0 0000124467777765532222 123455555666655544
No 166
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=84.52 E-value=5.8 Score=39.97 Aligned_cols=139 Identities=14% Similarity=0.092 Sum_probs=88.7
Q ss_pred CCCceeecCCC---chhHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 010990 203 TTHLVFNDDIQ---GTASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 260 (496)
Q Consensus 203 ~~~~~FnDDiQ---GTa~V~LAgll~Alr~-------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~ 260 (496)
..|++.|---- .+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 86 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~-- 163 (334)
T 2pi1_A 86 KGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF-- 163 (334)
T ss_dssp HTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC--
Confidence 35666664222 2444577888877752 35679999999999999999999998643
Q ss_pred HhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHH
Q 010990 261 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 336 (496)
Q Consensus 261 ~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evv~ 336 (496)
|+ +++.+|+..- +.. ........+|.|+++. .|+++=.- ...+.|+++.++
T Consensus 164 ---G~-------~V~~~d~~~~----------~~~---~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 218 (334)
T 2pi1_A 164 ---GM-------KVLCYDVVKR----------EDL---KEKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERIS 218 (334)
T ss_dssp ---TC-------EEEEECSSCC----------HHH---HHTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHH
T ss_pred ---cC-------EEEEECCCcc----------hhh---HhcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHh
Confidence 65 6888887421 110 0101112359999987 99887431 234689999999
Q ss_pred HHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEE
Q 010990 337 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI 373 (496)
Q Consensus 337 ~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai 373 (496)
.|. +..|+.=.|+-..--|-.-.+|+ ..|+.-
T Consensus 219 ~mk---~gailIN~aRg~~vd~~aL~~aL--~~g~i~ 250 (334)
T 2pi1_A 219 LMK---DGVYLINTARGKVVDTDALYRAY--QRGKFS 250 (334)
T ss_dssp HSC---TTEEEEECSCGGGBCHHHHHHHH--HTTCEE
T ss_pred hCC---CCcEEEECCCCcccCHHHHHHHH--HhCCce
Confidence 995 67788888875422333333444 345543
No 167
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=84.45 E-value=1.4 Score=44.22 Aligned_cols=191 Identities=14% Similarity=0.100 Sum_probs=111.1
Q ss_pred CCCceeecCC----CchhHHHHHHHHHHHHH----------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHh
Q 010990 203 TTHLVFNDDI----QGTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 262 (496)
Q Consensus 203 ~~~~~FnDDi----QGTa~V~LAgll~Alr~----------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~ 262 (496)
..+++.|--- +..|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~---- 161 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAW---- 161 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTT----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHC----
Confidence 4666665322 34555678888887763 24578999999999999999999998642
Q ss_pred cCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHHH
Q 010990 263 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAM 338 (496)
Q Consensus 263 ~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evv~~M 338 (496)
|+ +++.+|+..- ...... .+. ...+|.|+++. .|+++=.- ...+.++++.++.|
T Consensus 162 -G~-------~V~~~dr~~~-------~~~~~~-~~~----~~~~l~ell~~--aDiV~l~~Plt~~t~~li~~~~l~~m 219 (315)
T 3pp8_A 162 -GF-------PLRCWSRSRK-------SWPGVE-SYV----GREELRAFLNQ--TRVLINLLPNTAQTVGIINSELLDQL 219 (315)
T ss_dssp -TC-------CEEEEESSCC-------CCTTCE-EEE----SHHHHHHHHHT--CSEEEECCCCCGGGTTCBSHHHHTTS
T ss_pred -CC-------EEEEEcCCch-------hhhhhh-hhc----ccCCHHHHHhh--CCEEEEecCCchhhhhhccHHHHhhC
Confidence 65 5788887421 111111 110 11468888886 89887431 12367889998888
Q ss_pred HccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCC--CcccCCeeeCccCcccccccchhhHHHHHhCCccc
Q 010990 339 ASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFD--PFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRV 416 (496)
Q Consensus 339 ~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsPf~--pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~i 416 (496)
. +..|+.=.|+-..--|-.-.+|++ .|+.--|.=--|. |.. .+. .-=+..|+.+-|=++-. +.
T Consensus 220 k---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~-~~~--pL~~~~nvilTPHia~~------t~- 284 (315)
T 3pp8_A 220 P---DGAYVLNLARGVHVQEADLLAALD--SGKLKGAMLDVFSQEPLP-QES--PLWRHPRVAMTPHIAAV------TR- 284 (315)
T ss_dssp C---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCC-TTC--GGGGCTTEEECSSCSSC------CC-
T ss_pred C---CCCEEEECCCChhhhHHHHHHHHH--hCCccEEEcCCCCCCCCC-CCC--hhhcCCCEEECCCCCcc------cH-
Confidence 5 677888888754223333334443 4554333111111 100 000 01244688888877632 21
Q ss_pred CHHHHHHHHHHHHhcccc
Q 010990 417 HDDMLLAASEALAKQVTE 434 (496)
Q Consensus 417 td~m~~aAA~aLA~~v~~ 434 (496)
...|...+++-|.....-
T Consensus 285 ~~~~~~~~~~ni~~~~~G 302 (315)
T 3pp8_A 285 PAEAIDYISRTITQLEKG 302 (315)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 256777777777766543
No 168
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=84.22 E-value=2.4 Score=40.65 Aligned_cols=97 Identities=15% Similarity=0.132 Sum_probs=58.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 315 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 315 (496)
-.||.|+|+|..|..+|..|... |. ..+++++|++. +.+...++.-.. .....++.|+++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~-------~~~~~~~~~g~~-~~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD-------RSRDIALERGIV-DEATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH-------HHHHHHHHTTSC-SEEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH-------HHHHHHHHcCCc-ccccCCHHHhhcC-
Confidence 35899999999999999988653 32 13688888741 111111110000 0012456667765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcc--CCCceEEecCCCC
Q 010990 316 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNPT 354 (496)
Q Consensus 316 kptvLIG~S~~~g~Ft~evv~~M~~~--~~rPIIFaLSNPt 354 (496)
+|++| ++.++... +++++.+... .+..||.-+||-.
T Consensus 67 -aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~~ 104 (290)
T 3b1f_A 67 -ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGSTK 104 (290)
T ss_dssp -CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSCH
T ss_pred -CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCCc
Confidence 88877 44444333 8888888764 3566777777743
No 169
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=83.93 E-value=1.7 Score=42.91 Aligned_cols=100 Identities=9% Similarity=0.118 Sum_probs=61.0
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc-CCCCCHHHHhc
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDAVK 313 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~-~~~~~L~e~v~ 313 (496)
+..||.|+|+|..|..+|..|... |.. ...+++++|+. ..+ +.+. .+.+.. ....+..|+++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~----~~~-~~~~----~l~~~G~~~~~~~~e~~~ 83 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD----MDL-ATVS----ALRKMGVKLTPHNKETVQ 83 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----TTS-HHHH----HHHHHTCEEESCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC----ccH-HHHH----HHHHcCCEEeCChHHHhc
Confidence 345899999999999999988653 531 11368888764 110 0011 111111 11246778887
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCCC
Q 010990 314 VIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 355 (496)
Q Consensus 314 ~vkptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt~ 355 (496)
. +|++| ++-.+ ...+++++.+.... +..+|.-+||..+
T Consensus 84 ~--aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 84 H--SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp H--CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred c--CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 6 78776 33333 45778888876543 4568888999874
No 170
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=83.90 E-value=0.65 Score=44.45 Aligned_cols=98 Identities=15% Similarity=0.216 Sum_probs=56.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc---------cCCCCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---------HEPVNN 307 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~---------~~~~~~ 307 (496)
.||.|+|+|..|..+|..|... |. +++++|++.= + +...++.-... .....+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~r~~~----~---~~~~~~~g~~~~~~~~~~~~~~~~~~ 64 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----GN-------DVTLIDQWPA----H---IEAIRKNGLIADFNGEEVVANLPIFS 64 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCHH----H---HHHHHHHCEEEEETTEEEEECCCEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEECCHH----H---HHHHHhCCEEEEeCCCeeEecceeec
Confidence 4899999999999999988653 53 6888887521 0 11111000000 000012
Q ss_pred HHHHhccc-CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCCC
Q 010990 308 LLDAVKVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 355 (496)
Q Consensus 308 L~e~v~~v-kptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt~ 355 (496)
..|+.+.+ ++|++| ++..+. ..+++++.+.... +..+|..++|...
T Consensus 65 ~~~~~~~~~~~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 65 PEEIDHQNEQVDLII-ALTKAQ-QLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp GGGCCTTSCCCSEEE-ECSCHH-HHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred chhhcccCCCCCEEE-EEeccc-cHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 22333211 478777 333332 4688888887654 4678888999753
No 171
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=83.73 E-value=4.3 Score=42.03 Aligned_cols=193 Identities=12% Similarity=0.036 Sum_probs=109.6
Q ss_pred cCCCceeecCCC---chhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcChHHHHHHHHHHHH
Q 010990 202 GTTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 258 (496)
Q Consensus 202 r~~~~~FnDDiQ---GTa~V~LAgll~Alr~--------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~ 258 (496)
+..|.+.|---- .+|=-+++.+|+..|- .+..|.+.++.|+|.|..|-.+|+.+...
T Consensus 134 ~~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~ 213 (393)
T 2nac_A 134 DRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPF 213 (393)
T ss_dssp HTTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGG
T ss_pred cCCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhC
Confidence 357888884332 3444478888888762 24578999999999999999999988542
Q ss_pred HHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-c-CCCCCHHHHhcccCCcEEEEcc----CCCCCCCH
Q 010990 259 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-H-EPVNNLLDAVKVIKPTILIGSS----GVGRTFTK 332 (496)
Q Consensus 259 ~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~-~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~ 332 (496)
|+ +++.+|+... .. ..++. . ....+|.|+++. .|+++=.- ...+.|++
T Consensus 214 -----G~-------~V~~~d~~~~-------~~-----~~~~~~G~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~ 267 (393)
T 2nac_A 214 -----DV-------HLHYTDRHRL-------PE-----SVEKELNLTWHATREDMYPV--CDVVTLNCPLHPETEHMIND 267 (393)
T ss_dssp -----TC-------EEEEECSSCC-------CH-----HHHHHHTCEECSSHHHHGGG--CSEEEECSCCCTTTTTCBSH
T ss_pred -----CC-------EEEEEcCCcc-------ch-----hhHhhcCceecCCHHHHHhc--CCEEEEecCCchHHHHHhhH
Confidence 54 5887876411 01 11111 0 112478898886 89888541 22467888
Q ss_pred HHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCC--CcccCCeeeCccCcccccccchhhHHHHH
Q 010990 333 EVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFD--PFEYNGKVFVPGQANNAYIFPGFGLGLVI 410 (496)
Q Consensus 333 evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsPf~--pv~~~G~~~~p~Q~NN~~iFPGiglG~l~ 410 (496)
+.++.|. +..++.=.|.-...-|-.-.+|+ .+|+.--|.--=|. |..- ... -=+..|+.+-|=++-....
T Consensus 268 ~~l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~gA~lDV~~~EP~~~-~~p--L~~~~nvilTPHia~~T~e 339 (393)
T 2nac_A 268 ETLKLFK---RGAYIVNTARGKLCDRDAVARAL--ESGRLAGYAGDVWFPQPAPK-DHP--WRTMPYNGMTPHISGTTLT 339 (393)
T ss_dssp HHHTTSC---TTEEEEECSCGGGBCHHHHHHHH--HTTSEEEEEESCCSSSSCCT-TCG--GGTSTTBCCCCSCTTCSHH
T ss_pred HHHhhCC---CCCEEEECCCchHhhHHHHHHHH--HcCCeeEEEEEecCCCCCCC-CCh--hHcCCCEEECCCCCcCcHH
Confidence 9888885 56788888864321222222333 34553322111111 1100 000 1135688888877643322
Q ss_pred hCCcccCHHHHHHHHHHHHhccc
Q 010990 411 SGAIRVHDDMLLAASEALAKQVT 433 (496)
Q Consensus 411 ~~a~~itd~m~~aAA~aLA~~v~ 433 (496)
+ ...|...+++-|.....
T Consensus 340 ~-----~~~~~~~~~~nl~~~~~ 357 (393)
T 2nac_A 340 A-----QARYAAGTREILECFFE 357 (393)
T ss_dssp H-----HHHHHHHHHHHHHHHHH
T ss_pred H-----HHHHHHHHHHHHHHHHc
Confidence 2 23344555565555543
No 172
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=83.51 E-value=5.5 Score=39.12 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=27.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
..||.|+|+|..|.++|..|... |. ++++++|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 35899999999999999999764 53 478888874
No 173
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=83.47 E-value=1.3 Score=46.68 Aligned_cols=97 Identities=16% Similarity=0.169 Sum_probs=59.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc-----cccCCCCCHHHHh
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-----HEHEPVNNLLDAV 312 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a-----~~~~~~~~L~e~v 312 (496)
||.|+|+|..|..+|..|... |. +++++|+..= + .....+.+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~~----~---~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTYS----K---SEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSHH----H---HHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCHH----H---HHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 799999999999999988653 64 5888887411 0 111111100 0011235788888
Q ss_pred ccc-CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010990 313 KVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 354 (496)
Q Consensus 313 ~~v-kptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt 354 (496)
+.+ ++|++| ++.+.+...+++++.+.... +.-||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 753 488877 44434334677887776543 456888888864
No 174
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=83.44 E-value=3.4 Score=36.40 Aligned_cols=95 Identities=12% Similarity=0.104 Sum_probs=52.7
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 010990 237 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 314 (496)
Q Consensus 237 ~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~ 314 (496)
.+|+|.|| |-.|-.+++.|++ .| -+++.++++.- +...+...+..+.. +-....++.++++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 67 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVAG 67 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHcC
Confidence 68999998 8888888877764 25 36888877521 10101001111111 11122457777875
Q ss_pred cCCcEEEEccCCCCC---------CCHHHHHHHHccCCCceEEe
Q 010990 315 IKPTILIGSSGVGRT---------FTKEVIEAMASFNEKPLILA 349 (496)
Q Consensus 315 vkptvLIG~S~~~g~---------Ft~evv~~M~~~~~rPIIFa 349 (496)
+|++|=+.+.... -+..++++|.+..-+.|||.
T Consensus 68 --~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~ 109 (206)
T 1hdo_A 68 --QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVAC 109 (206)
T ss_dssp --CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred --CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEE
Confidence 8999987765431 14566666655443445554
No 175
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=83.41 E-value=5.1 Score=39.95 Aligned_cols=122 Identities=15% Similarity=0.171 Sum_probs=77.9
Q ss_pred CCCceeecCCCc---hhHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcChHHHHHHHHHHHH
Q 010990 203 TTHLVFNDDIQG---TASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 258 (496)
Q Consensus 203 ~~~~~FnDDiQG---Ta~V~LAgll~Alr~---------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~ 258 (496)
..+.+.|.---. +|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 89 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 168 (320)
T 1gdh_A 89 RGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGF 168 (320)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTT
T ss_pred CCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHC
Confidence 456666654333 333477888887663 23468899999999999999999988632
Q ss_pred HHHhcCCChhhhcCcEEEEcC-CCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHH
Q 010990 259 ISKQTKAPVEETRKKICLVDS-KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKE 333 (496)
Q Consensus 259 ~~~~~G~~~eeA~~~i~~vD~-~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~e 333 (496)
|. +++.+|+ .. +. ...+ .+ ......++.|+++. .|+++=.-- ..+.++++
T Consensus 169 -----G~-------~V~~~d~~~~-------~~-~~~~-~~--g~~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~ 223 (320)
T 1gdh_A 169 -----DM-------DIDYFDTHRA-------SS-SDEA-SY--QATFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKA 223 (320)
T ss_dssp -----TC-------EEEEECSSCC-------CH-HHHH-HH--TCEECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHH
T ss_pred -----CC-------EEEEECCCCc-------Ch-hhhh-hc--CcEEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHH
Confidence 53 6888887 41 10 0000 01 00112478898886 888874321 23567888
Q ss_pred HHHHHHccCCCceEEecCC
Q 010990 334 VIEAMASFNEKPLILALSN 352 (496)
Q Consensus 334 vv~~M~~~~~rPIIFaLSN 352 (496)
.++.|. +.-++.-.|.
T Consensus 224 ~l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 224 TIKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HHTTSC---TTEEEEECSC
T ss_pred HHhhCC---CCcEEEECCC
Confidence 888775 5668887777
No 176
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=83.41 E-value=1.4 Score=43.96 Aligned_cols=114 Identities=20% Similarity=0.250 Sum_probs=68.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCC--CCCHHHHhccc
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKVI 315 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~--~~~L~e~v~~v 315 (496)
||.|+|||.-|..+|-+|+.. |+ -..+.|+|.+-=..++-.-+|.+- ..+...... ..+--+++++
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~-~~~~~~~~~i~~~~d~~~~~~- 69 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHA-AAGIDKYPKIVGGADYSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHH-HGGGTCCCEEEEESCGGGGTT-
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhcc-cccCCCCCeEecCCCHHHhCC-
Confidence 799999999999998887652 55 256999997521111111112221 122211111 1122356776
Q ss_pred CCcEEEEccCCCCC--CC------------HHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcc
Q 010990 316 KPTILIGSSGVGRT--FT------------KEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 367 (496)
Q Consensus 316 kptvLIG~S~~~g~--Ft------------~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~ 367 (496)
.|+.|=+.+.+.. -| +++++.+++++++.||+-.|||- ..+..-+++.
T Consensus 70 -aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv---d~~t~i~~k~ 131 (294)
T 2x0j_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM---DVMTYIMWKE 131 (294)
T ss_dssp -CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH---HHHHHHHHHH
T ss_pred -CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc---hhhHHhhHHH
Confidence 9999866664421 23 46788888999999999999995 3444444443
No 177
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=83.22 E-value=2 Score=41.31 Aligned_cols=91 Identities=13% Similarity=0.196 Sum_probs=57.8
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 010990 237 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 315 (496)
Q Consensus 237 ~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 315 (496)
.||.|+|+ |..|..+|..|.. .|. +++++|++- +.+...+ +..-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g~-------~V~~~~r~~-------~~~~~~~----~~g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SAH-------HLAAIEIAP-------EGRDRLQ----GMGIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SSS-------EEEEECCSH-------HHHHHHH----HTTCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCC-------EEEEEECCH-------HHHHHHH----hcCCCcCCHHHHhcC-
Confidence 48999999 9999999999865 353 688887641 1111111 111111356677765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010990 316 KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 354 (496)
Q Consensus 316 kptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt 354 (496)
+|++| ++..+.. .+++++.+.... +..||.-+|+..
T Consensus 68 -aDvVi-~av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVV-LALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEE-ECSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEE-EcCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 89888 4443333 688888887543 456787799854
No 178
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=83.13 E-value=5.2 Score=40.39 Aligned_cols=122 Identities=11% Similarity=0.040 Sum_probs=81.1
Q ss_pred CCCceeecCCCc---hhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 010990 203 TTHLVFNDDIQG---TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 261 (496)
Q Consensus 203 ~~~~~FnDDiQG---Ta~V~LAgll~Alr~------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~ 261 (496)
..+++.|.---. +|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 111 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~--- 187 (335)
T 2g76_A 111 KGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSF--- 187 (335)
T ss_dssp HTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHTT---
T ss_pred CCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHHC---
Confidence 467777764322 344568888887764 24679999999999999999999988532
Q ss_pred hcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-cCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHH
Q 010990 262 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 336 (496)
Q Consensus 262 ~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evv~ 336 (496)
|+ +++.+|+.. + +. .+.. .-...+|.|+++. .|+++=.-- ..+.++++.++
T Consensus 188 --G~-------~V~~~d~~~-------~---~~---~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 243 (335)
T 2g76_A 188 --GM-------KTIGYDPII-------S---PE---VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFA 243 (335)
T ss_dssp --TC-------EEEEECSSS-------C---HH---HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHT
T ss_pred --CC-------EEEEECCCc-------c---hh---hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHh
Confidence 54 588888641 1 10 1111 0011478898886 899885421 23578888888
Q ss_pred HHHccCCCceEEecCCCC
Q 010990 337 AMASFNEKPLILALSNPT 354 (496)
Q Consensus 337 ~M~~~~~rPIIFaLSNPt 354 (496)
.|. +..++.=.|.-.
T Consensus 244 ~mk---~gailIN~arg~ 258 (335)
T 2g76_A 244 QCK---KGVRVVNCARGG 258 (335)
T ss_dssp TSC---TTEEEEECSCTT
T ss_pred hCC---CCcEEEECCCcc
Confidence 885 567888888743
No 179
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=83.07 E-value=2.7 Score=43.85 Aligned_cols=71 Identities=25% Similarity=0.365 Sum_probs=48.4
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcc
Q 010990 236 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 314 (496)
Q Consensus 236 d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~ 314 (496)
--|++|+|+ |-+|.|-++.+... |.. ..++..+|.+ . ..+.. +| +.++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~--~-~~~g~-------~~-----------~~i~~ 263 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIK--E-TSRGG-------PF-----------DEIPQ 263 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHH--H-HTTCS-------CC-----------THHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeecc--c-cccCC-------ch-----------hhHhh
Confidence 468999999 99999999888653 641 1257777764 1 11100 01 23554
Q ss_pred cCCcEEEEccCC----CCCCCHHHHHHH
Q 010990 315 IKPTILIGSSGV----GRTFTKEVIEAM 338 (496)
Q Consensus 315 vkptvLIG~S~~----~g~Ft~evv~~M 338 (496)
.|++||+--. |.++|+|+|+.|
T Consensus 264 --aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 264 --ADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp --SSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred --CCEEEECcCcCCCCCcccCHHHHhcC
Confidence 8999998664 567999999998
No 180
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=83.01 E-value=1.3 Score=44.59 Aligned_cols=108 Identities=8% Similarity=0.118 Sum_probs=60.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhch-----hhccc------cCCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-----PWAHE------HEPV 305 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~-----~~a~~------~~~~ 305 (496)
.||.|+|+|..|.++|..|..+ |.....-..+++++|+..-+. .+ ......++ .|-.. ....
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~-----G~~~~~~~~~V~~~~r~~~~~-~~-~~~~~l~~~~~~~~~~~~~~~~~~i~~~ 94 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN-----AKNNYLFENEVRMWIRDEFVN-GE-RMVDIINNKHENTKYLKGVPLPHNIVAH 94 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH-----HHHCTTBCSCEEEECCSCC----C-CHHHHHHHHCBCTTTSTTCBCCTTEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHc-----CCccCCCCCeEEEEECChhhh-hH-HHHHHHHhcCcccccCCcccCcCCeEEE
Confidence 3899999999999999999765 310000003688888753210 00 00111100 01000 0112
Q ss_pred CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHc----cC-CCceEEecCCCCC
Q 010990 306 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS----FN-EKPLILALSNPTS 355 (496)
Q Consensus 306 ~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~----~~-~rPIIFaLSNPt~ 355 (496)
.++.|+++. +|++| ++-.. ...+++++.+.. .. +..+|..++|-.+
T Consensus 95 ~~~~ea~~~--aDvVi-lav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 95 SDLASVIND--ADLLI-FIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp SSTHHHHTT--CSEEE-ECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred CCHHHHHcC--CCEEE-EcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 467788876 88776 33322 467888888865 33 4668889998653
No 181
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=82.71 E-value=1.8 Score=44.01 Aligned_cols=117 Identities=16% Similarity=0.332 Sum_probs=68.2
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc-CCCCCHHHH
Q 010990 234 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDA 311 (496)
Q Consensus 234 l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~-~~~~~L~e~ 311 (496)
+...||.|+|| |..|..+|-.++. .|+. .++.++|.+-=..++..-+|.+. .|.... ....++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~~-----~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRLT-----PNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTCC-----SCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCCC-----CEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 34679999998 9999999966654 3652 46999997411001000012221 121100 012578889
Q ss_pred hcccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCce-EEecCCCCCCCCCCHHHHhcc
Q 010990 312 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPL-ILALSNPTSQSECTAEEAYTW 367 (496)
Q Consensus 312 v~~vkptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~rPI-IFaLSNPt~~~E~~peda~~~ 367 (496)
+++ +|++|=+.+.+ |- .-+++++.+.+++..-+ |+-.|||. .....-+++.
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv---d~~t~i~~k~ 139 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA---DITGLVTLIY 139 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH---HHHHHHHHHH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch---HHHHHHHHHH
Confidence 987 89888444333 21 22467777888898885 88899995 3344444443
No 182
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=82.71 E-value=0.82 Score=45.27 Aligned_cols=110 Identities=18% Similarity=0.142 Sum_probs=65.0
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc---ccCCCcCCCchhchhhccccCCCCCHHHHh
Q 010990 237 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL---IVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 312 (496)
Q Consensus 237 ~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL---i~~~r~~~l~~~k~~~a~~~~~~~~L~e~v 312 (496)
.||+|.|| |..|..++..|+. .|.--..-...++++|...- .. +...++.+...+|..+.....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~-g~~~dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALE-GVVMELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHH-HHHHHHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhcc-chhhhhhcccccccCCeEeccChHHHh
Confidence 48999997 9999999888754 24310000136999997420 00 000001111112222211225688888
Q ss_pred cccCCcEEEEccCCCCC--------------CCHHHHHHHHccC-CCceEEecCCCC
Q 010990 313 KVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EKPLILALSNPT 354 (496)
Q Consensus 313 ~~vkptvLIG~S~~~g~--------------Ft~evv~~M~~~~-~rPIIFaLSNPt 354 (496)
++ +|++|=+.+.+.. .|.++++++.+++ .+.+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 76 9999977765532 3456788888876 666888899996
No 183
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=82.60 E-value=1.3 Score=46.06 Aligned_cols=112 Identities=23% Similarity=0.267 Sum_probs=63.3
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCC--CC-CHH
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VN-NLL 309 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~--~~-~L~ 309 (496)
.++.+||+|+|.|.+|+++|++|.+ .|. ++...|.+-.- .++....+.+..-. .+ .-.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G~-------~V~~~D~~~~~-------~~~~~~~L~~~gi~~~~g~~~~ 66 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LGA-------IVTVNDGKPFD-------ENPTAQSLLEEGIKVVCGSHPL 66 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TTC-------EEEEEESSCGG-------GCHHHHHHHHTTCEEEESCCCG
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CCC-------EEEEEeCCccc-------CChHHHHHHhCCCEEEECCChH
Confidence 4678899999999999999988865 364 68889985210 01111112111000 01 111
Q ss_pred HHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCC
Q 010990 310 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGS 378 (496)
Q Consensus 310 e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGs 378 (496)
+.+.. .+|.+|=.++.+ .=++++.++..+ .-||+= | +|-++...+++.|-.|||
T Consensus 67 ~~~~~-~~d~vv~spgi~-~~~p~~~~a~~~--gi~v~~---------~--~e~~~~~~~~~~IaVTGT 120 (451)
T 3lk7_A 67 ELLDE-DFCYMIKNPGIP-YNNPMVKKALEK--QIPVLT---------E--VELAYLVSESQLIGITGS 120 (451)
T ss_dssp GGGGS-CEEEEEECTTSC-TTSHHHHHHHHT--TCCEEC---------H--HHHHHHHCCSEEEEEECS
T ss_pred HhhcC-CCCEEEECCcCC-CCChhHHHHHHC--CCcEEe---------H--HHHHHHhcCCCEEEEECC
Confidence 12221 268777555554 346777666543 456551 1 334445566788888997
No 184
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=82.53 E-value=1 Score=44.52 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=27.9
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
....||.|+|+|..|.++|..|... |. +++++|+.
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred cCCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 3456999999999999999998753 54 57878764
No 185
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=82.50 E-value=1.4 Score=42.35 Aligned_cols=90 Identities=14% Similarity=0.176 Sum_probs=50.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-cCCCCCHHHHhccc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 315 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e~v~~v 315 (496)
.||.|+|+|..|..+|..|... |. +++++|++ .. .... +.+. .....++.|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~----~~---~~~~----~~~~g~~~~~~~~~~~~~- 57 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----GC-------SVTIWNRS----PE---KAEE----LAALGAERAATPCEVVES- 57 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS----GG---GGHH----HHHTTCEECSSHHHHHHH-
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----CC-------eEEEEcCC----HH---HHHH----HHHCCCeecCCHHHHHhc-
Confidence 4899999999999999998753 53 57777774 11 1111 1111 1123567777776
Q ss_pred CCcEEEEccCCCCCCCHHHH---HHHHcc-CCCceEEecCC
Q 010990 316 KPTILIGSSGVGRTFTKEVI---EAMASF-NEKPLILALSN 352 (496)
Q Consensus 316 kptvLIG~S~~~g~Ft~evv---~~M~~~-~~rPIIFaLSN 352 (496)
+|++| ++.....-.++++ +.+.+. .+..+|.-+|+
T Consensus 58 -aDvvi-~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st 96 (287)
T 3pef_A 58 -CPVTF-AMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMST 96 (287)
T ss_dssp -CSEEE-ECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred -CCEEE-EEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCC
Confidence 67766 2222111233444 333222 24456666665
No 186
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=82.41 E-value=1.5 Score=43.74 Aligned_cols=35 Identities=20% Similarity=0.485 Sum_probs=27.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
..||||+|+|.||+..|..|.+. |-+ -+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~~-----~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DPS-----IEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CTT-----SEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----CcC-----CeEEEEeCC
Confidence 45899999999999999998653 321 368899875
No 187
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=82.39 E-value=0.54 Score=42.90 Aligned_cols=95 Identities=15% Similarity=0.164 Sum_probs=58.8
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc---c-ccCCCCCHHHHh
Q 010990 238 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---H-EHEPVNNLLDAV 312 (496)
Q Consensus 238 riv~~G-AG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a---~-~~~~~~~L~e~v 312 (496)
||.|+| +|..|..+|..|.+ .|. +++++|++- .+ ....++.+. . ..-...++.+++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g~-------~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LGH-------EIVVGSRRE----EK---AEAKAAEYRRIAGDASITGMKNEDAA 62 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TTC-------EEEEEESSH----HH---HHHHHHHHHHHHSSCCEEEEEHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HH---HHHHHHHhccccccCCCChhhHHHHH
Confidence 799999 99999999988864 253 688888741 11 111111110 0 000024688888
Q ss_pred cccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCC
Q 010990 313 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 355 (496)
Q Consensus 313 ~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~ 355 (496)
+. +|++|=+.. +. ..+++++.+.+..+..+|.-+||+.+
T Consensus 63 ~~--~D~Vi~~~~-~~-~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 63 EA--CDIAVLTIP-WE-HAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HH--CSEEEECSC-HH-HHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred hc--CCEEEEeCC-hh-hHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 76 899884433 32 35677776654335679999999764
No 188
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=82.35 E-value=2.8 Score=43.94 Aligned_cols=99 Identities=12% Similarity=0.129 Sum_probs=61.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 314 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~ 314 (496)
..||.|+|+|..|..+|..|... |. +++++|+.- +.+...++.+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~~-------~~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRTT-------SKTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH-------HHHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCCH-------HHHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 35899999999999999988653 64 577787631 111112111100 01123578888875
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010990 315 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 354 (496)
Q Consensus 315 v-kptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt 354 (496)
+ ++|++| ++.+.+...+++++.+.... +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 588877 44444445677888776544 456888888864
No 189
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=81.96 E-value=1.1 Score=43.36 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.||.|+|+|..|.++|..|... |. +++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999998753 53 58888874
No 190
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=81.86 E-value=1.2 Score=41.54 Aligned_cols=92 Identities=15% Similarity=0.193 Sum_probs=55.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcc
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 314 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~ 314 (496)
...||.|+|+|..|..+|..|.. .|. +++++|++- .+ .. .+++..-...++.++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~~----~~---~~----~~~~~g~~~~~~~~~~~~ 83 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRNP----KR---TA----RLFPSAAQVTFQEEAVSS 83 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSH----HH---HH----HHSBTTSEEEEHHHHTTS
T ss_pred CCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HH---HH----HHHHcCCceecHHHHHhC
Confidence 44689999999999999998864 253 588887641 11 11 111111001267788875
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCC
Q 010990 315 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 315 vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
+|++|= +..+. ..+++++ ++...+.-+|.-+||+.
T Consensus 84 --~DvVi~-av~~~-~~~~v~~-l~~~~~~~~vv~~s~g~ 118 (215)
T 2vns_A 84 --PEVIFV-AVFRE-HYSSLCS-LSDQLAGKILVDVSNPT 118 (215)
T ss_dssp --CSEEEE-CSCGG-GSGGGGG-GHHHHTTCEEEECCCCC
T ss_pred --CCEEEE-CCChH-HHHHHHH-HHHhcCCCEEEEeCCCc
Confidence 898883 33332 3455554 33223566899999986
No 191
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=81.62 E-value=1.7 Score=42.23 Aligned_cols=91 Identities=13% Similarity=0.161 Sum_probs=50.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc-CCCCCHHHHhccc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDAVKVI 315 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~-~~~~~L~e~v~~v 315 (496)
.||.|+|+|..|..+|..|... |. +++++|++. .+ +.. +++.. ....++.|+++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~~----~~---~~~----~~~~g~~~~~~~~~~~~~- 86 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-----GH-------TVTVWNRTA----EK---CDL----FIQEGARLGRTPAEVVST- 86 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSG----GG---GHH----HHHTTCEECSCHHHHHHH-
T ss_pred CeEEEEcccHHHHHHHHHHHhC-----CC-------EEEEEeCCH----HH---HHH----HHHcCCEEcCCHHHHHhc-
Confidence 6899999999999999988642 53 588888641 11 111 11110 112467777765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHH----HccCCCceEEecCCC
Q 010990 316 KPTILIGSSGVGRTFTKEVIEAM----ASFNEKPLILALSNP 353 (496)
Q Consensus 316 kptvLIG~S~~~g~Ft~evv~~M----~~~~~rPIIFaLSNP 353 (496)
+|++|= +.....-.++++... ....+..+|+-+||-
T Consensus 87 -~DvVi~-av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~ 126 (316)
T 2uyy_A 87 -CDITFA-CVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTV 126 (316)
T ss_dssp -CSEEEE-CCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCC
T ss_pred -CCEEEE-eCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCC
Confidence 777663 221112234444332 112345566677773
No 192
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=81.58 E-value=1.7 Score=42.67 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=28.5
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+...||.|+|+|..|.++|..|... |. +++++|++
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 34567999999999999999998753 64 57777764
No 193
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=81.51 E-value=4 Score=40.46 Aligned_cols=90 Identities=18% Similarity=0.192 Sum_probs=55.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc----CCCCCHHH-
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLD- 310 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~----~~~~~L~e- 310 (496)
-.||.|+|+|..|..+|..|... |.. .+++++|++- +.+ ..+.+. ....++.|
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-----G~~-----~~V~~~dr~~-------~~~-----~~a~~~G~~~~~~~~~~~~ 90 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-----GFK-----GKIYGYDINP-------ESI-----SKAVDLGIIDEGTTSIAKV 90 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-----TCC-----SEEEEECSCH-------HHH-----HHHHHTTSCSEEESCTTGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-----CCC-----CEEEEEECCH-------HHH-----HHHHHCCCcchhcCCHHHH
Confidence 36999999999999999988763 651 4788888741 111 111111 01245666
Q ss_pred HhcccCCcEEEEccCCCCCCCHHHHHHHHcc-CCCceEEecC
Q 010990 311 AVKVIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALS 351 (496)
Q Consensus 311 ~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~-~~rPIIFaLS 351 (496)
+++. +|++| ++.+.. -.+++++.+... .+.-||.-.+
T Consensus 91 ~~~~--aDvVi-lavp~~-~~~~vl~~l~~~l~~~~iv~d~~ 128 (314)
T 3ggo_A 91 EDFS--PDFVM-LSSPVR-TFREIAKKLSYILSEDATVTDQG 128 (314)
T ss_dssp GGGC--CSEEE-ECSCGG-GHHHHHHHHHHHSCTTCEEEECC
T ss_pred hhcc--CCEEE-EeCCHH-HHHHHHHHHhhccCCCcEEEECC
Confidence 6765 88777 555443 356777777653 3455665544
No 194
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=81.33 E-value=3.8 Score=40.09 Aligned_cols=93 Identities=19% Similarity=0.253 Sum_probs=54.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc---c-------cc--CC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---H-------EH--EP 304 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a---~-------~~--~~ 304 (496)
.||.|+|+|..|..+|..|... |. +++++|++.= .+...++... . .. ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g~-------~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----GQ-------SVLAWDIDAQ-------RIKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCHH-------HHHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCCHH-------HHHHHHhcCCeEEecccccccccccee
Confidence 5899999999999999988642 53 5888887421 0111111100 0 00 01
Q ss_pred CCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCC
Q 010990 305 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSN 352 (496)
Q Consensus 305 ~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSN 352 (496)
..++.++++. +|++|= +... ...+++++.+.... +..+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~-~v~~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILI-VVPA-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEE-CSCG-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEE-eCCc-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2567787764 887773 3322 23588888886543 3456666644
No 195
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=81.29 E-value=1.5 Score=48.50 Aligned_cols=37 Identities=30% Similarity=0.429 Sum_probs=33.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+|.+.||+|+|+|..|+-+|..|+.+ |+ ++|.++|.+
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 47889999999999999999999875 87 789999987
No 196
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=81.28 E-value=1.2 Score=38.80 Aligned_cols=34 Identities=6% Similarity=0.154 Sum_probs=27.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+.+|+|+|+|..|..+++.|.. .| .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~-----~g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQ-----RG-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 35689999999999999998865 25 368888875
No 197
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=80.94 E-value=3.1 Score=44.26 Aligned_cols=99 Identities=14% Similarity=0.178 Sum_probs=61.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc--CCCCCHHHHhc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVK 313 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~--~~~~~L~e~v~ 313 (496)
..+|.|+|+|..|..+|..|... |. +++++|+.- +......+.-+... ....++.|+++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~~-------~~~~~l~~~g~~g~~i~~~~s~~e~v~ 64 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV-------SKVDDFLANEAKGTKVVGAQSLKEMVS 64 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST-------HHHHHHHHTTTTTSSCEECSSHHHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCCH-------HHHHHHHhcccCCCceeccCCHHHHHh
Confidence 35899999999999999998763 64 588888741 11111111111110 11367888887
Q ss_pred cc-CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010990 314 VI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 354 (496)
Q Consensus 314 ~v-kptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt 354 (496)
.+ +||++| ++-+.+.-.+++++.+...- +..||.-+||-.
T Consensus 65 ~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 65 KLKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp TBCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred hccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 54 488776 44434445677888776543 567888888854
No 198
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=80.90 E-value=2 Score=38.25 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=28.0
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.+.+|+|+|+|..|..+|+.|... .| .+++++|++
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 5567899999999999999988542 14 358888874
No 199
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=80.89 E-value=6.1 Score=40.18 Aligned_cols=188 Identities=16% Similarity=0.111 Sum_probs=112.1
Q ss_pred CCCceeecC-C-CchhHHHHHHHHHHHHH----------------------------hCCCcccceEEEeCcChHHHHHH
Q 010990 203 TTHLVFNDD-I-QGTASVVLAGVVAALKL----------------------------IGGTLAEHRFLFLGAGEAGTGIA 252 (496)
Q Consensus 203 ~~~~~FnDD-i-QGTa~V~LAgll~Alr~----------------------------~g~~l~d~riv~~GAG~Ag~GiA 252 (496)
..|++.|.- . +.+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|-.+|
T Consensus 97 ~gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA 176 (352)
T 3gg9_A 97 KGVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVA 176 (352)
T ss_dssp HTCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHH
T ss_pred CCeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHH
Confidence 366666632 1 23444567777777663 24678899999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc--cCCCCCHHHHhcccCCcEEEEc----cCC
Q 010990 253 ELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE--HEPVNNLLDAVKVIKPTILIGS----SGV 326 (496)
Q Consensus 253 ~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~--~~~~~~L~e~v~~vkptvLIG~----S~~ 326 (496)
+.+... |+ +++.+|+.. . . ..+.. .....+|.|+++. .|+++=. ...
T Consensus 177 ~~l~~~-----G~-------~V~~~d~~~--~--------~---~~~~~~g~~~~~~l~ell~~--aDiV~l~~Plt~~t 229 (352)
T 3gg9_A 177 GYGRAF-----GM-------NVLVWGREN--S--------K---ERARADGFAVAESKDALFEQ--SDVLSVHLRLNDET 229 (352)
T ss_dssp HHHHHT-----TC-------EEEEECSHH--H--------H---HHHHHTTCEECSSHHHHHHH--CSEEEECCCCSTTT
T ss_pred HHHHhC-----CC-------EEEEECCCC--C--------H---HHHHhcCceEeCCHHHHHhh--CCEEEEeccCcHHH
Confidence 988643 65 688888641 0 0 01111 0123589999987 8988743 223
Q ss_pred CCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEe-----cCCCCCCcccCCeeeCccCccccccc
Q 010990 327 GRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIF 401 (496)
Q Consensus 327 ~g~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~A-----sGsPf~pv~~~G~~~~p~Q~NN~~iF 401 (496)
.+.++++.++.|. +..++.=.|+-..--|-.-.+|++ +|+.-.| ..-|.++ . ..-=+..|+.+-
T Consensus 230 ~~li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~----~--~pL~~~~nvilT 298 (352)
T 3gg9_A 230 RSIITVADLTRMK---PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFETEPILQ----G--HTLLRMENCICT 298 (352)
T ss_dssp TTCBCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSSSCCCS----C--CGGGGCTTEEEC
T ss_pred HHhhCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCCCCCCC----C--ChhhcCCCEEEC
Confidence 4688999999985 678999888854334444445554 3443211 1112211 0 011234688888
Q ss_pred chhhHHHHHhCCcccCHHHHHHHHHHHHhccc
Q 010990 402 PGFGLGLVISGAIRVHDDMLLAASEALAKQVT 433 (496)
Q Consensus 402 PGiglG~l~~~a~~itd~m~~aAA~aLA~~v~ 433 (496)
|=+|-..- .-...|...+++-|.....
T Consensus 299 PHia~~t~-----e~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 299 PHIGYVER-----ESYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp CSCTTCBH-----HHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCH-----HHHHHHHHHHHHHHHHHHc
Confidence 88753211 1224566666666666653
No 200
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=80.50 E-value=6.6 Score=39.75 Aligned_cols=81 Identities=21% Similarity=0.381 Sum_probs=44.9
Q ss_pred HHHHHHHhC-CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc
Q 010990 223 VVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE 301 (496)
Q Consensus 223 ll~Alr~~g-~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~ 301 (496)
.+.|+.... .--..++|+|+|||..|...+.+... .|. ++++.+|+. +.+..+++.
T Consensus 200 a~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~------------~~~~~~~~~ 256 (404)
T 3ip1_A 200 AYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEPS------------EVRRNLAKE 256 (404)
T ss_dssp HHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC------------HHHHHHHHH
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC------------HHHHHHHHH
Confidence 344443333 33456899999998777655544432 365 578877653 223334432
Q ss_pred c-------CCCCCHHHHhcc----cCCcEEEEccCC
Q 010990 302 H-------EPVNNLLDAVKV----IKPTILIGSSGV 326 (496)
Q Consensus 302 ~-------~~~~~L~e~v~~----vkptvLIG~S~~ 326 (496)
- ....++.+.|+. -++|+.|-+++.
T Consensus 257 lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 257 LGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp HTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSC
T ss_pred cCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCC
Confidence 0 112345555543 368898877763
No 201
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=80.43 E-value=24 Score=35.66 Aligned_cols=210 Identities=15% Similarity=0.112 Sum_probs=121.4
Q ss_pred eeEeeeCCCccHHHHHHHHcCCCceeecCCC---chhHHHHHHHHHHHHHh------------------------C-CCc
Q 010990 183 LIQFEDFANHNAFELLAKYGTTHLVFNDDIQ---GTASVVLAGVVAALKLI------------------------G-GTL 234 (496)
Q Consensus 183 li~~EDf~~~~af~iL~~yr~~~~~FnDDiQ---GTa~V~LAgll~Alr~~------------------------g-~~l 234 (496)
+|+.--.+-.|- .+-.--+..|.+.|---- .+|=-+++.+|+..|-. | ..|
T Consensus 88 ~I~~~~~G~d~i-d~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l 166 (347)
T 1mx3_A 88 IIVRIGSGFDNI-DIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARI 166 (347)
T ss_dssp EEEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCC
T ss_pred EEEEcccccCcc-cHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCC
Confidence 477666666552 221122357888885433 34445788888887721 1 468
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcc
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 314 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~ 314 (496)
.+.+|.|+|.|..|-.+|+.+.. .|+ +++.+|++- . +.. ...+ ......+|.|+++.
T Consensus 167 ~g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~----~--~~~---~~~~--g~~~~~~l~ell~~ 223 (347)
T 1mx3_A 167 RGETLGIIGLGRVGQAVALRAKA-----FGF-------NVLFYDPYL----S--DGV---ERAL--GLQRVSTLQDLLFH 223 (347)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECTTS----C--TTH---HHHH--TCEECSSHHHHHHH
T ss_pred CCCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCCc----c--hhh---Hhhc--CCeecCCHHHHHhc
Confidence 89999999999999999998864 264 588888641 1 100 1111 00112478898886
Q ss_pred cCCcEEEEcc----CCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEe-----cCCCCCCccc
Q 010990 315 IKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEY 385 (496)
Q Consensus 315 vkptvLIG~S----~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~A-----sGsPf~pv~~ 385 (496)
.|+++=.- ...+.++++.++.|. +..++.=.|+=...-|-.-.+|++ +|+.--| ..-|+++
T Consensus 224 --aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~~--- 293 (347)
T 1mx3_A 224 --SDCVTLHCGLNEHNHHLINDFTVKQMR---QGAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFSF--- 293 (347)
T ss_dssp --CSEEEECCCCCTTCTTSBSHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCCT---
T ss_pred --CCEEEEcCCCCHHHHHHhHHHHHhcCC---CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCCC---
Confidence 89887532 223578888888884 567888888754223333334443 4543322 2333221
Q ss_pred CCeeeCccCcccccccchhhHHHHHhCCcccCHHHHHHHHHHHHhccc
Q 010990 386 NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVT 433 (496)
Q Consensus 386 ~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~itd~m~~aAA~aLA~~v~ 433 (496)
.+.. --..+|+.+-|=++-.. ......|...+++-+.....
T Consensus 294 ~~~~--L~~~~nvi~tPHia~~t-----~~~~~~~~~~~~~ni~~~~~ 334 (347)
T 1mx3_A 294 SQGP--LKDAPNLICTPHAAWYS-----EQASIEMREEAAREIRRAIT 334 (347)
T ss_dssp TSST--TTTCSSEEECSSCTTCC-----HHHHHHHHHHHHHHHHHHHH
T ss_pred CCch--HHhCCCEEEEchHHHHH-----HHHHHHHHHHHHHHHHHHHc
Confidence 1111 12478999999876422 22234555566666655543
No 202
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=80.41 E-value=1.4 Score=43.47 Aligned_cols=98 Identities=19% Similarity=0.222 Sum_probs=55.3
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 300 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~ 300 (496)
.|++.+|+-.| +.|++|+|||.+|-+++..|.+. | .+|+++++. .++.+.+. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 34566665433 78999999999999998888653 4 478988874 22211111 1110
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCCC----CCCCHHHHH-HHHccCCCceEEecC
Q 010990 301 EHEPVNNLLDAVKVIKPTILIGSSGVG----RTFTKEVIE-AMASFNEKPLILALS 351 (496)
Q Consensus 301 ~~~~~~~L~e~v~~vkptvLIG~S~~~----g~Ft~evv~-~M~~~~~rPIIFaLS 351 (496)
......+| . ++|++|-++..+ ..++++.+. .+. +..+++=++
T Consensus 163 ~~~~~~~l----~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~v 209 (269)
T 3phh_A 163 DCFMEPPK----S--AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLA 209 (269)
T ss_dssp EEESSCCS----S--CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESC
T ss_pred eEecHHHh----c--cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeC
Confidence 10111222 2 699999766544 146676554 343 345666553
No 203
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=80.37 E-value=1.4 Score=43.22 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=28.6
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.+-.||.|+|+|..|.++|..|... |. +++++|++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 34456999999999999999999763 54 58888874
No 204
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=80.30 E-value=5.3 Score=40.14 Aligned_cols=195 Identities=14% Similarity=0.102 Sum_probs=109.7
Q ss_pred CCCceeecCC---CchhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcChHHHHHHHHHHHHH
Q 010990 203 TTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 259 (496)
Q Consensus 203 ~~~~~FnDDi---QGTa~V~LAgll~Alr~--------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~ 259 (496)
..|.+.|--- +.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 89 ~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~-- 166 (330)
T 4e5n_A 89 RGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG-- 166 (330)
T ss_dssp TTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT--
T ss_pred cCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH--
Confidence 4666666532 23444577777776652 2456889999999999999999998753
Q ss_pred HHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHH
Q 010990 260 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 335 (496)
Q Consensus 260 ~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evv 335 (496)
.|+ +++.+|+... . ....+ .+ .-...+|.|+++. .|+++=.- ...+.++++.+
T Consensus 167 ---~G~-------~V~~~d~~~~----~---~~~~~-~~---g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l 223 (330)
T 4e5n_A 167 ---WGA-------TLQYHEAKAL----D---TQTEQ-RL---GLRQVACSELFAS--SDFILLALPLNADTLHLVNAELL 223 (330)
T ss_dssp ---SCC-------EEEEECSSCC----C---HHHHH-HH---TEEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHH
T ss_pred ---CCC-------EEEEECCCCC----c---HhHHH-hc---CceeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHH
Confidence 254 5888887521 0 11111 11 0012479999987 89887542 22368899999
Q ss_pred HHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCCcccCCeeeCc-------cCcccccccchhhHHH
Q 010990 336 EAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVP-------GQANNAYIFPGFGLGL 408 (496)
Q Consensus 336 ~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsPf~pv~~~G~~~~p-------~Q~NN~~iFPGiglG~ 408 (496)
+.|. +..++.=.|+-...-|-.-.+|+ ..|+.-.|.=-=|.+-.+ .....| =+..|+.+-|=++-..
T Consensus 224 ~~mk---~gailIN~arg~~vd~~aL~~aL--~~g~i~gA~lDV~~~E~~-~~~~~Pl~~~~~L~~~~nvilTPHia~~t 297 (330)
T 4e5n_A 224 ALVR---PGALLVNPCRGSVVDEAAVLAAL--ERGQLGGYAADVFEMEDW-ARADRPQQIDPALLAHPNTLFTPHIGSAV 297 (330)
T ss_dssp TTSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCGGGCT-TCTTCCSSCCHHHHTCSSEEECSSCTTCC
T ss_pred hhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCccEEEecccccccc-cccCCCCCCCchHHcCCCEEECCcCCCCh
Confidence 9885 67788888875422232233444 345543221111111000 000112 1345777777765322
Q ss_pred HHhCCcccCHHHHHHHHHHHHhccc
Q 010990 409 VISGAIRVHDDMLLAASEALAKQVT 433 (496)
Q Consensus 409 l~~~a~~itd~m~~aAA~aLA~~v~ 433 (496)
. .-...|...+++-|.....
T Consensus 298 ~-----e~~~~~~~~~~~ni~~~~~ 317 (330)
T 4e5n_A 298 R-----AVRLEIERCAAQNILQALA 317 (330)
T ss_dssp H-----HHHHHHHHHHHHHHHHHHT
T ss_pred H-----HHHHHHHHHHHHHHHHHHc
Confidence 1 1234566666666666554
No 205
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=80.27 E-value=1.5 Score=42.94 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=25.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
-||+|+|||.||+..|..|.. .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 489999999999999988865 476 47777764
No 206
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=79.95 E-value=0.91 Score=46.00 Aligned_cols=119 Identities=18% Similarity=0.233 Sum_probs=71.3
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc--CCCCCHHH
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLD 310 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~--~~~~~L~e 310 (496)
+....||.|+|||..|.++|-.|+.. |+ ...+.++|.+-=..++-.-+|.+. ..|.... ...++..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~~- 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDYS- 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSGG-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCHH-
Confidence 34567999999999999999888652 54 257999997511001000012211 1232111 1123453
Q ss_pred HhcccCCcEEEEccCCC---C-----CC------CHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccc
Q 010990 311 AVKVIKPTILIGSSGVG---R-----TF------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS 368 (496)
Q Consensus 311 ~v~~vkptvLIG~S~~~---g-----~F------t~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t 368 (496)
++++ .|++|=+.+.+ | +| -+++.+.|.++++.-+|+-.|||. .+..+-+++.+
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv---di~t~~~~k~s 150 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPV---DILTYVAWKIS 150 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHH
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChH---HHHHHHHHHHh
Confidence 5776 89887444333 2 12 247888889999999999999996 34555555543
No 207
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=79.81 E-value=2 Score=41.30 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=26.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.||.|+|+|..|..+|..|... |. +++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----GF-------DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 3799999999999999999764 53 57888874
No 208
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=79.43 E-value=4.4 Score=38.54 Aligned_cols=97 Identities=14% Similarity=0.168 Sum_probs=57.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 316 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 316 (496)
.||.|+|+|..|..+|..|.. .|.. .+++++|++. +.+...+ .+--......++.++++. +
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~~-----~~V~~~d~~~-------~~~~~~~-~~g~~~~~~~~~~~~~~~-~ 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGFK-----GKIYGYDINP-------ESISKAV-DLGIIDEGTTSIAKVEDF-S 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCH-------HHHHHHH-HTTSCSEEESCGGGGGGT-C
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCCC-----cEEEEEeCCH-------HHHHHHH-HCCCcccccCCHHHHhcC-C
Confidence 379999999999999998865 2541 3688888741 1111111 000000012467777762 3
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcc-CCCceEEecCCCC
Q 010990 317 PTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 354 (496)
Q Consensus 317 ptvLIG~S~~~g~Ft~evv~~M~~~-~~rPIIFaLSNPt 354 (496)
+|++| ++..+ ..++++++.+... .+..+|.-+||-.
T Consensus 63 aDvVi-lavp~-~~~~~v~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 PDFVM-LSSPV-RTFREIAKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp CSEEE-ECSCH-HHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred CCEEE-EcCCH-HHHHHHHHHHHhhCCCCcEEEECCCCc
Confidence 88887 44433 2466777776543 3456777778754
No 209
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=79.40 E-value=1.2 Score=46.73 Aligned_cols=38 Identities=26% Similarity=0.403 Sum_probs=33.2
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 232 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 232 ~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.|++.||+++|+|..|.-+|..|+.+ |+ ++|.++|.+
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 346788999999999999999999875 87 789999986
No 210
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=79.19 E-value=0.9 Score=46.15 Aligned_cols=124 Identities=15% Similarity=0.150 Sum_probs=74.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc--CCCCCHHHHhc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVK 313 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~--~~~~~L~e~v~ 313 (496)
..||.|+|||..|.++|-.++.. |+- ..+.++|.+-=..++..-+|.+. ..|.... ...+++.+ ++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~-----g~~-----~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~~ 88 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK-----DLA-----DEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-SA 88 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH-----CCC-----SEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-hC
Confidence 46999999999999999988763 651 47999997411001000012211 1232211 11135544 66
Q ss_pred ccCCcEEEEccC---CCC-----CC------CHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCC---cEEEec
Q 010990 314 VIKPTILIGSSG---VGR-----TF------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKG---RAIFAS 376 (496)
Q Consensus 314 ~vkptvLIG~S~---~~g-----~F------t~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G---~ai~As 376 (496)
+ +|+.|=+.+ .+| ++ -+++++.+.++++.-+|+-.|||. .....-+++.+ | +-+|.+
T Consensus 89 d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPv---di~t~~~~k~s-g~p~~rViG~ 162 (330)
T 3ldh_A 89 G--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELG---TDKNKQDWKLS-GLPMHRIIGS 162 (330)
T ss_dssp S--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHH-CCCGGGEECC
T ss_pred C--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCcc---HHHHHHHHHHh-CCCHHHeecc
Confidence 6 998883333 332 12 246778888999999999999995 45555666654 3 335555
Q ss_pred C
Q 010990 377 G 377 (496)
Q Consensus 377 G 377 (496)
|
T Consensus 163 g 163 (330)
T 3ldh_A 163 G 163 (330)
T ss_dssp T
T ss_pred c
Confidence 4
No 211
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=79.06 E-value=1.6 Score=42.01 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=25.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.||.|+|+|..|..+|..|... |. +++++|++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-----GV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5899999999999999988642 53 57888764
No 212
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=78.95 E-value=3.9 Score=37.46 Aligned_cols=97 Identities=13% Similarity=0.107 Sum_probs=55.1
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhc---h-hhcc-ccCCC
Q 010990 232 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---K-PWAH-EHEPV 305 (496)
Q Consensus 232 ~~l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k---~-~~a~-~~~~~ 305 (496)
.++++.+|+|.|| |-.|-.+++.|++ .|. ++++++++. +.+...+ . .+.+ +-.
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G~-------~V~~~~R~~-------~~~~~~~~~~~~~~~~~Dl~-- 75 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KGH-------EPVAMVRNE-------EQGPELRERGASDIVVANLE-- 75 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEESSG-------GGHHHHHHTTCSEEEECCTT--
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CCC-------eEEEEECCh-------HHHHHHHhCCCceEEEcccH--
Confidence 4578899999998 8888888888765 353 688887741 1111111 1 1111 111
Q ss_pred CCHHHHhcccCCcEEEEccCCCCC------------CCHHHHHHHHccCCCceEEecC
Q 010990 306 NNLLDAVKVIKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 306 ~~L~e~v~~vkptvLIG~S~~~g~------------Ft~evv~~M~~~~~rPIIFaLS 351 (496)
.++.++++. +|++|=+.+.... -+..+++++.+...+-|||.=|
T Consensus 76 ~~~~~~~~~--~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 76 EDFSHAFAS--IDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp SCCGGGGTT--CSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHcC--CCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 566777774 9999977765421 0345666665554455666444
No 213
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=78.67 E-value=1.9 Score=41.87 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=28.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
..+|+|+|||.||+..|..|.+ .|. .++.++|++.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 4689999999999999999864 353 2799999874
No 214
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=78.40 E-value=5.1 Score=40.40 Aligned_cols=84 Identities=24% Similarity=0.362 Sum_probs=66.3
Q ss_pred hhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch
Q 010990 215 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 293 (496)
Q Consensus 215 Ta~V~LAgll~Alr~~g~~l~d~riv~~GAG~-Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~ 293 (496)
..-+|-.|++-=|+-.+.+|+..++|++|.+. -|.-+|-||.. .|. .+.+|.|+
T Consensus 158 ~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~------------- 212 (303)
T 4b4u_A 158 YGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR------------- 212 (303)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-------------
T ss_pred ccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC-------------
Confidence 34478889999999999999999999999654 57788877754 243 46666553
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHH
Q 010990 294 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIE 336 (496)
Q Consensus 294 ~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evv~ 336 (496)
..+|.+.++. +|++|...+.++.++.|+|+
T Consensus 213 -----------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk 242 (303)
T 4b4u_A 213 -----------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK 242 (303)
T ss_dssp -----------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC
T ss_pred -----------CCCHHHHhhc--CCeEEeccCCCCcccccccc
Confidence 1347788886 99999999999999999887
No 215
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=78.38 E-value=2.8 Score=39.97 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=24.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 278 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD 278 (496)
.||.|+|+|..|..+|..|... |. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-----GH-------QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-----TC-------EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 3899999999999999988642 53 577776
No 216
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=78.06 E-value=4.2 Score=42.74 Aligned_cols=98 Identities=14% Similarity=0.154 Sum_probs=59.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhch-hhc-cccCCCCCHHHHhcc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 314 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~-~~a-~~~~~~~~L~e~v~~ 314 (496)
.||.|+|+|..|..+|..|... |. +++++|+.. . .+...++ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~---~~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----S---KVDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----H---HHHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCCH----H---HHHHHHhccccCCCeEEeCCHHHHHhh
Confidence 4799999999999999988653 64 588887641 1 1111111 000 000113578888863
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010990 315 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 354 (496)
Q Consensus 315 v-kptvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSNPt 354 (496)
+ ++|++| ++.+.+...+++++.+.... +.-||.-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 488777 44444335677887776543 356888888865
No 217
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=77.62 E-value=5.6 Score=38.36 Aligned_cols=106 Identities=12% Similarity=0.136 Sum_probs=61.5
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchh----chhhcc-ccCCCCC
Q 010990 234 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----KKPWAH-EHEPVNN 307 (496)
Q Consensus 234 l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~----k~~~a~-~~~~~~~ 307 (496)
++..||+|.|| |-.|-.+++.|++. |. .-+++.+|+...- .....+... +..+.+ +-....+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYS--GNLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTT--CCGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEeccccc--cchhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999998 88888888888763 52 1357777765321 110111110 111111 1112246
Q ss_pred HHHHhcccCCcEEEEccCCCCCC----------------CHHHHHHHHccCCCceEEecC
Q 010990 308 LLDAVKVIKPTILIGSSGVGRTF----------------TKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 308 L~e~v~~vkptvLIG~S~~~g~F----------------t~evv~~M~~~~~rPIIFaLS 351 (496)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 78888888899999887754311 356788887766566887544
No 218
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=77.30 E-value=1.9 Score=40.70 Aligned_cols=95 Identities=13% Similarity=0.177 Sum_probs=55.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 314 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~ 314 (496)
..||+|.|||-.|-.+++.|++ .|. +++.++++. +.+.+. ..+.+ +-....++.++++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~-----~g~-------~V~~~~r~~-------~~~~~~-~~~~~~Dl~d~~~~~~~~~~ 62 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTA-----QGH-------EVTGLRRSA-------QPMPAG-VQTLIADVTRPDTLASIVHL 62 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECTT-------SCCCTT-CCEEECCTTCGGGCTTGGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCc-------cccccC-CceEEccCCChHHHHHhhcC
Confidence 4689999999888888888765 253 577777641 112111 11111 11112345556654
Q ss_pred cCCcEEEEccCCCC-----------CCCHHHHHHHHccCCCceEEecC
Q 010990 315 IKPTILIGSSGVGR-----------TFTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 315 vkptvLIG~S~~~g-----------~Ft~evv~~M~~~~~rPIIFaLS 351 (496)
++|++|=+.+... ..+..+++++.+..-+-+||.=|
T Consensus 63 -~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 63 -RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp -CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred -CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 6999997654321 02567777777655566787544
No 219
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=77.06 E-value=1.9 Score=41.09 Aligned_cols=34 Identities=12% Similarity=0.341 Sum_probs=28.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+.+|+|+|||.||+..|..|.. .|. ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4689999999999999998864 354 699999864
No 220
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=76.79 E-value=2.8 Score=41.46 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.||.|+|+|..|.++|..|... |. -+++++|++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999998753 51 368888875
No 221
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=76.60 E-value=3.3 Score=40.26 Aligned_cols=33 Identities=15% Similarity=0.326 Sum_probs=26.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
..||.|+|+|..|.++|..|... |. +++++|++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-----PG-------GVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-----TT-------CEEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 35899999999999999988652 53 57888874
No 222
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=76.39 E-value=5.2 Score=37.90 Aligned_cols=90 Identities=10% Similarity=0.081 Sum_probs=50.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKP 317 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkp 317 (496)
||.|+|+|..|..+|..|... |. +++++|++. +.+...+ .+--......++.++ + ++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~~-------~~~~~~~-~~g~~~~~~~~~~~~-~--~~ 58 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-----GH-------YLIGVSRQQ-------STCEKAV-ERQLVDEAGQDLSLL-Q--TA 58 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCH-------HHHHHHH-HTTSCSEEESCGGGG-T--TC
T ss_pred EEEEEcCcHHHHHHHHHHHHC-----CC-------EEEEEECCH-------HHHHHHH-hCCCCccccCCHHHh-C--CC
Confidence 799999999999999988652 53 588888641 1011111 000000012356565 4 37
Q ss_pred cEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCC
Q 010990 318 TILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSN 352 (496)
Q Consensus 318 tvLIG~S~~~g~Ft~evv~~M~~~~-~rPIIFaLSN 352 (496)
|++| ++..+ ...+++++.+.... +..+|.-+||
T Consensus 59 D~vi-~av~~-~~~~~~~~~l~~~~~~~~~vv~~~~ 92 (279)
T 2f1k_A 59 KIIF-LCTPI-QLILPTLEKLIPHLSPTAIVTDVAS 92 (279)
T ss_dssp SEEE-ECSCH-HHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred CEEE-EECCH-HHHHHHHHHHHhhCCCCCEEEECCC
Confidence 7766 33322 24567777776543 3456666666
No 223
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=75.98 E-value=2.4 Score=39.51 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+|+|+|||.||+..|..|.. .|. ++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----ARK-------NILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCC
Confidence 589999999999999998865 353 69999974
No 224
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=75.22 E-value=1.3 Score=38.10 Aligned_cols=32 Identities=16% Similarity=0.421 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+|+|+|+|..|..+|+.|.. .|. +++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-----~g~-------~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-----SDI-------PLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 489999999999999998865 253 68989885
No 225
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=75.19 E-value=2.7 Score=41.60 Aligned_cols=38 Identities=18% Similarity=0.080 Sum_probs=28.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
+.+..+|+|+|||.||+..|..|.. .|+ ++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 3456799999999999999988865 364 6888887643
No 226
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=75.18 E-value=2.6 Score=42.37 Aligned_cols=37 Identities=30% Similarity=0.488 Sum_probs=29.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 283 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi 283 (496)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCCCC
Confidence 589999999999999999865 3642 379999987533
No 227
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=75.13 E-value=2 Score=41.19 Aligned_cols=32 Identities=16% Similarity=0.289 Sum_probs=25.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.||.|+|+|..|..+|..|... |. +++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----GY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 3899999999999999988642 53 58888764
No 228
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=75.08 E-value=2.5 Score=40.92 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=25.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
-|+|+|||.||+..|..|.. .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 48999999999999988865 376 47778764
No 229
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=74.90 E-value=2.6 Score=39.61 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=27.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
..+|+|+|||.||+..|..|.+ .|. ++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSAR-----YML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHH-----CCC-------cEEEEecc
Confidence 4699999999999999988865 254 59999997
No 230
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=74.85 E-value=2.8 Score=39.76 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
..+|||+|||.||+..|..|.. .|. ++.++|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 3589999999999999988865 353 68999986
No 231
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=74.74 E-value=2.6 Score=40.43 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=27.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
..+|+|+|||.||+..|..|.. .|. ++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RGL-------SFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 4689999999999999988854 253 689999864
No 232
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=74.54 E-value=2.1 Score=47.69 Aligned_cols=36 Identities=28% Similarity=0.485 Sum_probs=32.0
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
|++.||+|+|+|..|.-+|..|+.+ |+ ++|.++|.+
T Consensus 409 l~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d 444 (805)
T 2nvu_B 409 LDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 444 (805)
T ss_dssp HHTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECC
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCC
Confidence 3788999999999999999998764 87 789999987
No 233
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=74.19 E-value=5.4 Score=37.48 Aligned_cols=30 Identities=20% Similarity=0.281 Sum_probs=24.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
||.|+|+|..|..+|..|... |. +++++|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~-----g~-------~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR-----GV-------EVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----TC-------EEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHC-----CC-------eEEEeCC
Confidence 799999999999999998653 53 5776665
No 234
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=74.02 E-value=1.6 Score=44.44 Aligned_cols=119 Identities=21% Similarity=0.201 Sum_probs=64.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc-c--ccCCCCCHHHHh
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H--EHEPVNNLLDAV 312 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a-~--~~~~~~~L~e~v 312 (496)
+.||+|+|+|.+|-.+|+.|.+. .++.+.|++ ..+ +......+. . +.....+|.+++
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~ll 75 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHHH
Confidence 56999999999999998887531 357888774 111 111111111 0 111124688888
Q ss_pred cccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCCc
Q 010990 313 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPF 383 (496)
Q Consensus 313 ~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGsPf~pv 383 (496)
++ +|++|-+ +.. .+..+++++-.+. .=.++-+|.-....+..-+.|.+ .|. .+..|+-|.|-
T Consensus 76 ~~--~DvVIn~-~P~-~~~~~v~~a~l~~--G~~~vD~s~~~~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 76 KE--FELVIGA-LPG-FLGFKSIKAAIKS--KVDMVDVSFMPENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp TT--CSCEEEC-CCH-HHHHHHHHHHHHT--TCCEEECCCCSSCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred hC--CCEEEEC-CCh-hhhHHHHHHHHHh--CCeEEEccCCcHHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 85 9999976 322 3556666654432 22356677622112222344443 343 33355546554
No 235
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=73.30 E-value=8.5 Score=39.62 Aligned_cols=107 Identities=10% Similarity=0.104 Sum_probs=60.0
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCC--CC-HHH
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NN-LLD 310 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~--~~-L~e 310 (496)
++.+||+|+|.|.+|++.|+.|.+ .|. ++...|++-... .+..++ ..... +. -.+
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~~~~---------~~~~l~-~G~~~~~g~~~~~ 60 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRMTPP---------GLDKLP-EAVERHTGSLNDE 60 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSSSCT---------TGGGSC-TTSCEEESSCCHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCCCcc---------hhHHhh-CCCEEEECCCcHH
Confidence 567899999999999999877643 364 577888863211 111122 11111 11 256
Q ss_pred HhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCCcEEEecCC
Q 010990 311 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGS 378 (496)
Q Consensus 311 ~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G~ai~AsGs 378 (496)
.++ .+|.+|=-++.+. -++++..+.. ...|++ + | .|-++...+.+.|-.|||
T Consensus 61 ~~~--~~d~vV~s~gi~~-~~p~~~~a~~--~~~~v~---~------~--~~~~~~~~~~~vI~VTGT 112 (439)
T 2x5o_A 61 WLM--AADLIVASPGIAL-AHPSLSAAAD--AGIEIV---G------D--IELFCREAQAPIVAITGS 112 (439)
T ss_dssp HHH--TCSEEEECTTSCT-TCHHHHHHHH--TTCEEE---C------H--HHHHHHHCCSCEEEEECS
T ss_pred Hhc--cCCEEEeCCCCCC-CCHHHHHHHH--CCCcEE---E------H--HHHHHHhcCCCEEEEECC
Confidence 676 4888775444432 2466665443 233433 1 1 233333345678888886
No 236
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=72.93 E-value=2.5 Score=40.18 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
..+|+|+|||.||+..|..|.+. |. ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 46899999999999999988653 54 58889884
No 237
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=72.78 E-value=8.6 Score=41.09 Aligned_cols=99 Identities=17% Similarity=0.238 Sum_probs=56.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCC----HHHH
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN----LLDA 311 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~----L~e~ 311 (496)
+.||||+|||+.|-++|.+|++- .++. ..+|.+.|++-- .+ +-......++....-...+ |..+
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~~---~~-~~~~~~g~~~~~~~Vdadnv~~~l~aL 80 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEGT---KV-DVAQQYGVSFKLQQITPQNYLEVIGST 80 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSCC---SC-CHHHHHTCEEEECCCCTTTHHHHTGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccchh---hh-hHHhhcCCceeEEeccchhHHHHHHHH
Confidence 56899999999999999999764 3442 146888887521 11 1011111122111111122 3345
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC
Q 010990 312 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 352 (496)
Q Consensus 312 v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN 352 (496)
|+. .|++|=+|- ..++.+++++-.+. .==.+-++|
T Consensus 81 l~~--~DvVIN~s~--~~~~l~Im~aclea--Gv~YlDTa~ 115 (480)
T 2ph5_A 81 LEE--NDFLIDVSI--GISSLALIILCNQK--GALYINAAT 115 (480)
T ss_dssp CCT--TCEEEECCS--SSCHHHHHHHHHHH--TCEEEESSC
T ss_pred hcC--CCEEEECCc--cccCHHHHHHHHHc--CCCEEECCC
Confidence 654 599996553 35777888776532 223556666
No 238
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=72.37 E-value=4.6 Score=36.55 Aligned_cols=94 Identities=14% Similarity=0.135 Sum_probs=53.3
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchh-----chhhcc-ccCCCCCHH
Q 010990 237 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-----KKPWAH-EHEPVNNLL 309 (496)
Q Consensus 237 ~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~-----k~~~a~-~~~~~~~L~ 309 (496)
.+|+|.|| |-.|-.+++.|++. .|. ++++++++. . ..+... +..+.. +-....++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g~-------~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~D~~d~~~~~ 68 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TDM-------HITLYGRQL----K--TRIPPEIIDHERVTVIEGSFQNPGXLE 68 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CCC-------EEEEEESSH----H--HHSCHHHHTSTTEEEEECCTTCHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CCc-------eEEEEecCc----c--ccchhhccCCCceEEEECCCCCHHHHH
Confidence 35999996 77888888877621 353 688877751 1 012111 001111 111124577
Q ss_pred HHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEe
Q 010990 310 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILA 349 (496)
Q Consensus 310 e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFa 349 (496)
++++. +|++|=+.+..+.-++.+++.|.+..-+-||+.
T Consensus 69 ~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~i 106 (221)
T 3r6d_A 69 QAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGV 106 (221)
T ss_dssp HHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEE
Confidence 77875 899997776433226777888865444445553
No 239
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=74.80 E-value=0.76 Score=42.75 Aligned_cols=92 Identities=10% Similarity=0.070 Sum_probs=53.8
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhc
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 313 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~ 313 (496)
+.+.||.|+|+|..|..+|..|... |. +++++|++-- . + .+....-...++.|+++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G~-------~V~~~~r~~~----~-~-------~~~~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----GY-------SVVFGSRNPQ----V-S-------SLLPRGAEVLCYSEAAS 72 (201)
Confidence 4567899999999999999988653 42 4677776421 1 1 11111111125666666
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCC
Q 010990 314 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 314 ~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
. +|++| ++..+. -++++++ .....+..+|.-+||..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~~-l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLAE-LADSLKGRVLIDVSNNQ 108 (201)
Confidence 4 77766 333332 3455652 33223456888899976
No 240
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=72.20 E-value=29 Score=34.82 Aligned_cols=120 Identities=16% Similarity=0.135 Sum_probs=77.4
Q ss_pred CCceeecCCCc---hhHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 010990 204 THLVFNDDIQG---TASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 261 (496)
Q Consensus 204 ~~~~FnDDiQG---Ta~V~LAgll~Alr~-------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~ 261 (496)
.|.+.|-.--. +|=-+++.+|+..|- .+..|.+.++.|+|.|..|-.+|+.+...
T Consensus 87 gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~f--- 163 (334)
T 3kb6_A 87 GILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF--- 163 (334)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccccccceecCcEEEEECcchHHHHHHHhhccc---
Confidence 45555543333 333456666766542 24568899999999999999999988653
Q ss_pred hcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEc----cCCCCCCCHHHHHH
Q 010990 262 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVIEA 337 (496)
Q Consensus 262 ~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~----S~~~g~Ft~evv~~ 337 (496)
|+ +++.+|+. .+ + ...... ....+|.|.++. .|+++=. ....+.|+++.++.
T Consensus 164 --g~-------~v~~~d~~-----~~-~---~~~~~~----~~~~~l~ell~~--sDivslh~Plt~~T~~li~~~~l~~ 219 (334)
T 3kb6_A 164 --GM-------KVLCYDVV-----KR-E---DLKEKG----CVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp --TC-------EEEEECSS-----CC-H---HHHHTT----CEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred --Cc-------eeeecCCc-----cc-h---hhhhcC----ceecCHHHHHhh--CCEEEEcCCCChhhccCcCHHHHhh
Confidence 65 57777763 11 1 111111 112579999987 8988743 22246899999999
Q ss_pred HHccCCCceEEecCCC
Q 010990 338 MASFNEKPLILALSNP 353 (496)
Q Consensus 338 M~~~~~rPIIFaLSNP 353 (496)
|. +..++.=.|+=
T Consensus 220 mk---~~a~lIN~aRG 232 (334)
T 3kb6_A 220 MK---DGVYLINTARG 232 (334)
T ss_dssp SC---TTEEEEECSCG
T ss_pred cC---CCeEEEecCcc
Confidence 95 56677766653
No 241
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=72.05 E-value=2.7 Score=42.89 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.||||+|+|.||+..|..|... +- .-+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4899999999999999998653 21 1368888876
No 242
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=72.03 E-value=3.1 Score=39.87 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=27.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
..+|+|+|||.||+..|..|.+ .|. ++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGR-----AQL-------STLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----cCC-------cEEEEeCC
Confidence 4689999999999999988865 253 69999987
No 243
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=71.85 E-value=3.4 Score=41.60 Aligned_cols=38 Identities=13% Similarity=0.233 Sum_probs=30.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
...+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCCC
Confidence 35689999999999999999865 3652 36999988643
No 244
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=71.85 E-value=1.7 Score=43.91 Aligned_cols=121 Identities=17% Similarity=0.138 Sum_probs=71.7
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc--ccCCCcCCCchhchhhccccCCCCCHHHHhc
Q 010990 237 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL--IVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 313 (496)
Q Consensus 237 ~riv~~G-AG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL--i~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~ 313 (496)
.||+|.| ||..|..+|-+|+. .|+-.|+-.-.+.++|.+.- ..++..-+|.+.-.+|.++.....++.++++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~ 78 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFK 78 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTT
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhC
Confidence 5899999 79999999888764 25411111113899998521 0111000132222233322222356888888
Q ss_pred ccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCce-EEecCCCCCCCCCCHHHHhcc
Q 010990 314 VIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPL-ILALSNPTSQSECTAEEAYTW 367 (496)
Q Consensus 314 ~vkptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~rPI-IFaLSNPt~~~E~~peda~~~ 367 (496)
+ .|++|=+.+.+ |- ..+++++.+.+++.+-+ |+-.|||. .+...-+++.
T Consensus 79 d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv---d~~t~~~~~~ 142 (333)
T 5mdh_A 79 D--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA---NTNCLTASKS 142 (333)
T ss_dssp T--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH---HHHHHHHHHT
T ss_pred C--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch---HHHHHHHHHH
Confidence 7 99888554433 21 24678888888888774 99999995 4555555544
No 245
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=71.80 E-value=3.5 Score=40.15 Aligned_cols=96 Identities=16% Similarity=0.130 Sum_probs=58.6
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchh----hcc-------
Q 010990 233 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----WAH------- 300 (496)
Q Consensus 233 ~l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~----~a~------- 300 (496)
+++..||+|.|| |--|-.|++.|++ .| .+++.++++.- -.+.+.+ +..
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~--------~~~~~~~~~~~l~~~~v~~~~ 66 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGP--------RSPSKAKIFKALEDKGAIIVY 66 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSC--------CCHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC--------CChhHHHHHHHHHhCCcEEEE
Confidence 345579999999 9888888888765 25 35888877520 0111111 110
Q ss_pred -ccCCCCCHHHHhcccCCcEEEEccCCCCC-CCHHHHHHHHccC-CCceEE
Q 010990 301 -EHEPVNNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFN-EKPLIL 348 (496)
Q Consensus 301 -~~~~~~~L~e~v~~vkptvLIG~S~~~g~-Ft~evv~~M~~~~-~rPIIF 348 (496)
+-....+|.++++..++|++|=+.+..+. -+..+++++.+.. -+-+|+
T Consensus 67 ~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 67 GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp CCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred eecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 11112468888886679999988775432 3678999988765 444554
No 246
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=71.69 E-value=3.7 Score=39.36 Aligned_cols=33 Identities=21% Similarity=0.399 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+..|+|+|||.+|+.+|..|.+ .|. ++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4589999999999999998865 364 69999987
No 247
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=71.53 E-value=3.3 Score=42.40 Aligned_cols=42 Identities=26% Similarity=0.371 Sum_probs=31.4
Q ss_pred HhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 229 LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 229 ~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
+.++.-+..+|+|+|||.||+..|..|.+. | .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~~-----g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQKA-----G-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeccCC
Confidence 344444567999999999999999888652 5 36888887643
No 248
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=71.08 E-value=11 Score=36.40 Aligned_cols=97 Identities=15% Similarity=0.163 Sum_probs=57.3
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHH
Q 010990 232 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 310 (496)
Q Consensus 232 ~~l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e 310 (496)
++++..+|+|.|| |-.|-.+++.|++ .|. +++.+|+.. .. ..+...+ -+-....++.+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~-----~G~-------~V~~~~r~~----~~-~~~~~~~----~Dl~d~~~~~~ 73 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRT-----QGR-------TVRGFDLRP----SG-TGGEEVV----GSLEDGQALSD 73 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHH-----TTC-------CEEEEESSC----CS-SCCSEEE----SCTTCHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHh-----CCC-------EEEEEeCCC----CC-CCccEEe----cCcCCHHHHHH
Confidence 4577889999998 8888888888765 353 578777752 10 1111111 11112245777
Q ss_pred HhcccCCcEEEEccCCCCCC--------------CHHHHHHHHccCCCceEEecC
Q 010990 311 AVKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 311 ~v~~vkptvLIG~S~~~g~F--------------t~evv~~M~~~~~rPIIFaLS 351 (496)
+++ ++|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 74 ~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 74 AIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 887 599999877654211 245788887766677888655
No 249
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=71.02 E-value=11 Score=36.72 Aligned_cols=32 Identities=22% Similarity=0.451 Sum_probs=25.8
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~G-AG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.||.|+| +|..|..+|..|.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4899999 99999999998864 254 58888764
No 250
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=70.99 E-value=3.3 Score=40.51 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=28.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
+-.|+|+|||.||+..|-.|.+ .|+ ++.++|+.-.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~~ 38 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRPE 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCCC
Confidence 4589999999999999988865 364 5888888653
No 251
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=70.98 E-value=2.1 Score=46.10 Aligned_cols=102 Identities=15% Similarity=0.171 Sum_probs=62.2
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCC--------cCCCchhchhhcc---
Q 010990 232 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR--------KDSLQHFKKPWAH--- 300 (496)
Q Consensus 232 ~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r--------~~~l~~~k~~~a~--- 300 (496)
.+|++.||+++|+|..|.-+|..|+.+ |+ ++|.++|.+= |..+. .+++-..|..-+.
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D~-Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l 95 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGNQ-VSGEDAGNNFFLQRSSIGKNRAEAAMEFL 95 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCCB-BCHHHHHHCTTCCGGGBTSBHHHHHHHHH
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCCE-echhhcccCccCChhhcCcHHHHHHHHHH
Confidence 357889999999999999999999864 87 7999999862 22110 0112112222111
Q ss_pred -cc-CCC------CCHH-------HHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEe
Q 010990 301 -EH-EPV------NNLL-------DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILA 349 (496)
Q Consensus 301 -~~-~~~------~~L~-------e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFa 349 (496)
.. +.. ..+. +.++ +.|++|.++.. .=++-.+..++.....|.|.+
T Consensus 96 ~~lNp~v~v~~~~~~~~~~~~~~~~~~~--~~DvVi~~~d~--~~~r~~ln~~c~~~~iplI~~ 155 (531)
T 1tt5_A 96 QELNSDVSGSFVEESPENLLDNDPSFFC--RFTVVVATQLP--ESTSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp HTTCTTSBCCEESSCHHHHHHSCGGGGG--GCSEEEEESCC--HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHhCCCCeEEEeCCCcchhhhhhHHHhc--CCCEEEEeCCC--HHHHHHHHHHHHHcCCCEEEE
Confidence 11 111 2333 2334 48999987542 225556666666678899887
No 252
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=70.97 E-value=5.4 Score=39.87 Aligned_cols=103 Identities=22% Similarity=0.313 Sum_probs=64.0
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCC--CCCHHHHhcc
Q 010990 238 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKV 314 (496)
Q Consensus 238 riv~~G-AG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~--~~~L~e~v~~ 314 (496)
||.|+| +|..|..+|-+|... .++ ...+.++|.+-. .++..-+|.+. ++-..... ..+..++.++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 799999 899999998777542 244 157999999741 11110012111 11000000 1246678887
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCceEEecCCCC
Q 010990 315 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 315 vkptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
.|+.|=+.+.+ |- .-+++.+.+.++++.-+|+-.|||.
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 121 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV 121 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 99888655443 21 1246777888899999999999996
No 253
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=70.96 E-value=4.2 Score=40.51 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=27.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
...+|+|+|||.||+..|..|.. .|+ ++.++|+.-
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 35689999999999999998865 364 577887753
No 254
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=70.87 E-value=4.1 Score=35.65 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
-+++|+|+|.+|+-.|..|.+. | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 3799999999999999888653 5 468899876
No 255
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=70.87 E-value=3.7 Score=39.20 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
.+|+|+|||.+|+..|..|.+ .|+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999998875 365 588888863
No 256
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=70.80 E-value=4 Score=39.79 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+.+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 47 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM-----NNI-------SCRIIESMP 47 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 5689999999999999988754 253 689999863
No 257
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=70.71 E-value=3.7 Score=40.87 Aligned_cols=36 Identities=14% Similarity=0.187 Sum_probs=27.8
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
-+.-+|+|+|||.||+..|..|.. .|+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQ-----SGI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 345689999999999999988865 365 588888764
No 258
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=70.69 E-value=4.2 Score=32.60 Aligned_cols=83 Identities=17% Similarity=0.209 Sum_probs=48.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhch---hhcc-ccCCCCCHHHH
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---PWAH-EHEPVNNLLDA 311 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~---~~a~-~~~~~~~L~e~ 311 (496)
..+|+|+|+|..|..+++.|.. .|. .+++++|++. .+ +...+. .+.. +.....++.++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~----~~---~~~~~~~~~~~~~~d~~~~~~~~~~ 66 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDL----AA---LAVLNRMGVATKQVDAKDEAGLAKA 66 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCH----HH---HHHHHTTTCEEEECCTTCHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCH----HH---HHHHHhCCCcEEEecCCCHHHHHHH
Confidence 4689999999999999888865 352 3688888741 11 111110 0000 11111346666
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHc
Q 010990 312 VKVIKPTILIGSSGVGRTFTKEVIEAMAS 340 (496)
Q Consensus 312 v~~vkptvLIG~S~~~g~Ft~evv~~M~~ 340 (496)
++ ++|++|=+. +..++..+++.+.+
T Consensus 67 ~~--~~d~vi~~~--~~~~~~~~~~~~~~ 91 (118)
T 3ic5_A 67 LG--GFDAVISAA--PFFLTPIIAKAAKA 91 (118)
T ss_dssp TT--TCSEEEECS--CGGGHHHHHHHHHH
T ss_pred Hc--CCCEEEECC--CchhhHHHHHHHHH
Confidence 66 489888655 33466777776654
No 259
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=70.69 E-value=3.9 Score=40.95 Aligned_cols=35 Identities=26% Similarity=0.318 Sum_probs=27.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+.+|+|+|||.||+..|..|.. .|+ +++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~------~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGI------GKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCC
Confidence 4589999999999999998865 365 2378888754
No 260
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=70.65 E-value=4.6 Score=33.44 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=25.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 3589999999999999988864 24 368888874
No 261
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=70.61 E-value=5.2 Score=39.68 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=28.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
+.+|+|+|||.||+..|-.|.+ .|+ ++.++|++-.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 3589999999999999988754 364 6899998743
No 262
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=70.60 E-value=4 Score=34.52 Aligned_cols=34 Identities=21% Similarity=0.453 Sum_probs=26.9
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+..+|+|+|+|..|..+|+.|.. .|. +++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~-----~g~-------~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTA-----AGK-------KVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEECC
Confidence 34689999999999999998865 254 68888874
No 263
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=70.56 E-value=12 Score=36.19 Aligned_cols=103 Identities=15% Similarity=0.228 Sum_probs=58.1
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchh-chhhcc-ccCCCCCHHH
Q 010990 234 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-KKPWAH-EHEPVNNLLD 310 (496)
Q Consensus 234 l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~-k~~~a~-~~~~~~~L~e 310 (496)
++..+|+|.|| |-.|-.+++.|++ .| -+++.+|++. ....+.+... +..+.. +-....++.+
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~~ 83 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVNQ 83 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHHH
Confidence 55678999985 7777777777754 25 3688887751 1110111110 111111 1111235777
Q ss_pred HhcccCCcEEEEccCCCCC--C-----------CHHHHHHHHccCCCceEEecC
Q 010990 311 AVKVIKPTILIGSSGVGRT--F-----------TKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 311 ~v~~vkptvLIG~S~~~g~--F-----------t~evv~~M~~~~~rPIIFaLS 351 (496)
+++..++|++|=+.+.... . +..+++++.+..-+.|||.=|
T Consensus 84 ~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 84 LIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 7877789999988775432 0 345777776655567888543
No 264
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=70.55 E-value=3.4 Score=41.41 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=27.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
.+|||+|||.||+..|..|.+... .| .++.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999999876211 13 4688888764
No 265
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=70.55 E-value=3.8 Score=40.04 Aligned_cols=35 Identities=23% Similarity=0.356 Sum_probs=28.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
+..|+|+|||.+|+.+|..|.+ .|. ++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~-----~G~-------~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK-----ENK-------NTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 4689999999999999999875 364 6999998643
No 266
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=70.53 E-value=3.5 Score=41.10 Aligned_cols=36 Identities=17% Similarity=0.431 Sum_probs=28.9
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
.++.+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 345699999999999999988864 364 688998864
No 267
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=70.43 E-value=15 Score=37.33 Aligned_cols=136 Identities=6% Similarity=0.002 Sum_probs=89.1
Q ss_pred HHHHHHHHHhhCCCeeeEeeeCCCccHHHHHHHHcCCCceee--cCCCchhHHHHHHHHHHHHHhC------CCcccceE
Q 010990 168 DEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIG------GTLAEHRF 239 (496)
Q Consensus 168 defv~av~~~fGp~~li~~EDf~~~~af~iL~~yr~~~~~Fn--DDiQGTa~V~LAgll~Alr~~g------~~l~d~ri 239 (496)
...++ +-.+| .++ |-+-.++. .+.+.+.+| .++||.| || +---+=+||=++.=.+..| ++++..||
T Consensus 91 ~DTar-vls~~-~D~-iviR~~~~-~~~~~lA~~-~~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~v 164 (328)
T 3grf_A 91 QDTAE-VFSRM-VDI-CTARLATK-EMMREMAQH-ASVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKF 164 (328)
T ss_dssp HHHHH-HHTTT-CSE-EEEECSSH-HHHHHHHHH-CSSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCE
T ss_pred HHHHH-HHHhh-CCE-EEEecCCh-hHHHHHHHh-CCCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcEE
Confidence 33443 44567 554 44666654 444555565 4799999 76 6667778888888777777 37999999
Q ss_pred EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc--c----CCCCCHHHHhc
Q 010990 240 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE--H----EPVNNLLDAVK 313 (496)
Q Consensus 240 v~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~--~----~~~~~L~e~v~ 313 (496)
+++|-+.- .+|+-++.++.+ -|+ ++.++-.+|+..+-. +.+.+.-+.+++. . ....++.|+|+
T Consensus 165 a~vGD~~~--~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~ 233 (328)
T 3grf_A 165 AYCGDSMN--NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPI-KEVIDECEEIIAKHGTGGSIKIFHDCKKGCE 233 (328)
T ss_dssp EEESCCSS--HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCC-HHHHHHHHHHHHHHTCCCEEEEESSHHHHHT
T ss_pred EEeCCCCc--chHHHHHHHHHH-cCC-------EEEEECChHhhhCCC-HHHHHHHHHHHhhccCCCeEEEEcCHHHHhc
Confidence 99999853 588888887766 365 689998888853111 1121122233322 1 12368999999
Q ss_pred ccCCcEEEE
Q 010990 314 VIKPTILIG 322 (496)
Q Consensus 314 ~vkptvLIG 322 (496)
+ +||+.-
T Consensus 234 ~--aDvvyt 240 (328)
T 3grf_A 234 G--VDVVYT 240 (328)
T ss_dssp T--CSEEEE
T ss_pred C--CCEEEe
Confidence 8 999974
No 268
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=70.32 E-value=3.7 Score=40.66 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=28.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..-
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~~ 40 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQARR 40 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 4689999999999999998865 365 5888887643
No 269
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=70.20 E-value=5.7 Score=39.53 Aligned_cols=40 Identities=23% Similarity=0.380 Sum_probs=26.1
Q ss_pred HHHhcccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC
Q 010990 309 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 352 (496)
Q Consensus 309 ~e~v~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSN 352 (496)
...++..|||++||..+.. --.....|+....|+|.=-+|
T Consensus 85 ~~~l~~~~PDvVi~~g~~~----s~p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 85 LRVIRQLRPVCVLGLGGYV----TGPGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHCCSEEEECSSST----HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHhcCCCEEEEcCCcc----hHHHHHHHHHcCCCEEEEecc
Confidence 4567888999999986643 112222345567899975555
No 270
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=70.17 E-value=8.7 Score=37.08 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=60.1
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCc---CCCchhchhhcc-ccCCCC
Q 010990 232 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK---DSLQHFKKPWAH-EHEPVN 306 (496)
Q Consensus 232 ~~l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~---~~l~~~k~~~a~-~~~~~~ 306 (496)
.++++.+|+|.|| |-.|-.+++.|++ .| -+++.+|+.. .... +.+. ...+.. +-....
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFA---TGKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCS---SSCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhhhccC--CceEEEeeCCCHH
Confidence 4577889999998 7777777777754 25 3688888741 1100 0110 001111 111123
Q ss_pred CHHHHhcccCCcEEEEccCCCCC--C-----------CHHHHHHHHccCCCceEEecC
Q 010990 307 NLLDAVKVIKPTILIGSSGVGRT--F-----------TKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 307 ~L~e~v~~vkptvLIG~S~~~g~--F-----------t~evv~~M~~~~~rPIIFaLS 351 (496)
++.++++.+++|++|=+.+.... . +..+++++.+..-+.|||.=|
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 56777775579999988775532 0 345677776655567887544
No 271
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=70.11 E-value=4.1 Score=38.23 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=26.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEE-EcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~-vD~~ 280 (496)
..+|+|+|||.||+..|..|.+. |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988763 54 4666 8873
No 272
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=69.97 E-value=3.9 Score=39.05 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.+|+|+|+|.||+..|..|.+ .|. ++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR-----SGF-------SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 4689999999999999988865 253 68999985
No 273
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=69.77 E-value=3.7 Score=41.43 Aligned_cols=37 Identities=19% Similarity=0.372 Sum_probs=29.1
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 232 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 232 ~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
...++..|||+|||.+|+.+|..|.+. | ..++.++|+
T Consensus 19 ~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 19 SHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred ccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 335667999999999999999988764 4 147999998
No 274
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=69.75 E-value=3.9 Score=40.01 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=28.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+..|+|+|||.+|+.+|..|.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4589999999999999999875 364 599999874
No 275
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=69.62 E-value=4.4 Score=40.99 Aligned_cols=37 Identities=27% Similarity=0.434 Sum_probs=28.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 283 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi 283 (496)
+.-||||+|||.||+..|..|. ..| .+|.++|+.--+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCCC
Confidence 3459999999999999999981 123 479999886543
No 276
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=69.50 E-value=2.7 Score=44.15 Aligned_cols=75 Identities=20% Similarity=0.218 Sum_probs=43.3
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-cCCCCCHHH
Q 010990 232 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLD 310 (496)
Q Consensus 232 ~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e 310 (496)
..|...|++|+|.+.-..++++.|.+ .|+.. +.+. +....+.+... +...- ......+++
T Consensus 309 ~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~v------v~~~------~~~~~~~~~~~--~~~~v~~~D~~~le~ 369 (458)
T 3pdi_B 309 FMLSSARTAIAADPDLLLGFDALLRS-----MGAHT------VAAV------VPARAAALVDS--PLPSVRVGDLEDLEH 369 (458)
T ss_dssp HHHTTCEEEEECCHHHHHHHHHHHHT-----TTCEE------EEEE------ESSCCSCCTTT--TSSCEEESHHHHHHH
T ss_pred HhcCCCEEEEECCcHHHHHHHHHHHH-----CCCEE------EEEE------ECCCChhhhhC--ccCcEEeCCHHHHHH
Confidence 45778899999999999999998843 37732 2222 11111111110 00000 011124777
Q ss_pred HhcccCCcEEEEccC
Q 010990 311 AVKVIKPTILIGSSG 325 (496)
Q Consensus 311 ~v~~vkptvLIG~S~ 325 (496)
.++..+||.+||-|-
T Consensus 370 ~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 370 AARAGQAQLVIGNSH 384 (458)
T ss_dssp HHHHHTCSEEEECTT
T ss_pred HHHhcCCCEEEEChh
Confidence 788899999999554
No 277
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=69.45 E-value=4.8 Score=39.51 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=28.9
Q ss_pred cceEEEeCcChHHHHHHHHHHH-HHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIAL-EISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~-~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+..|+|+|||.+|+.+|-.|.+ . |. .++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~-----G~------~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNH-----GI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH-----CC------CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhc-----CC------CcEEEEeCCC
Confidence 5689999999999999999876 3 51 3699999875
No 278
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=69.45 E-value=4.6 Score=38.20 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=26.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+|+|+|+|.||+..|..|.+ .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 379999999999999998865 254 279999985
No 279
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=69.45 E-value=5.9 Score=35.74 Aligned_cols=94 Identities=10% Similarity=0.151 Sum_probs=51.3
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 010990 237 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 314 (496)
Q Consensus 237 ~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~ 314 (496)
.||+|.|| |-.|-.+++.|++ .| -+++.++++.- +.+.+.+ ...+.+ +-....++.++++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~----~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~ 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHPE----KIKIENE-HLKVKKADVSSLDEVCEVCKG 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCGG----GCCCCCT-TEEEECCCTTCHHHHHHHHTT
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCcc----cchhccC-ceEEEEecCCCHHHHHHHhcC
Confidence 58999996 6677667666654 25 36888888621 1111211 111111 11122457788875
Q ss_pred cCCcEEEEccCCCC----------CCCHHHHHHHHccCCCceEEe
Q 010990 315 IKPTILIGSSGVGR----------TFTKEVIEAMASFNEKPLILA 349 (496)
Q Consensus 315 vkptvLIG~S~~~g----------~Ft~evv~~M~~~~~rPIIFa 349 (496)
+|++|=+.+... ..+..++++|.+..-+-+||.
T Consensus 68 --~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ 110 (227)
T 3dhn_A 68 --ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMV 110 (227)
T ss_dssp --CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred --CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 999997765431 013456777765544455553
No 280
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=69.06 E-value=13 Score=37.11 Aligned_cols=91 Identities=22% Similarity=0.305 Sum_probs=54.4
Q ss_pred CCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCC
Q 010990 211 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 290 (496)
Q Consensus 211 DiQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~ 290 (496)
+.++.....++..+.+++..+.+ ..++|+|.|||..|...+.+... .|. ++++.+|+.
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~---------- 216 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLARL-----AGA------TTVILSTRQ---------- 216 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC----------
T ss_pred HHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----------
Confidence 44555455666677778766654 46799999998777655444432 365 578877653
Q ss_pred Cchhchhhcccc-------CCCCCHHHHhcc---c---CCcEEEEccC
Q 010990 291 LQHFKKPWAHEH-------EPVNNLLDAVKV---I---KPTILIGSSG 325 (496)
Q Consensus 291 l~~~k~~~a~~~-------~~~~~L~e~v~~---v---kptvLIG~S~ 325 (496)
+.+..+++.- ....++.+.++. . +.|++|=+++
T Consensus 217 --~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G 262 (370)
T 4ej6_A 217 --ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAG 262 (370)
T ss_dssp --HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSC
T ss_pred --HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCC
Confidence 2233344321 112456666654 1 5788887766
No 281
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=68.55 E-value=4.6 Score=39.44 Aligned_cols=35 Identities=26% Similarity=0.284 Sum_probs=28.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 283 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi 283 (496)
..|+|+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~-----~G~-------~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAK-----QGV-------KTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCCCC
Confidence 579999999999999998865 264 69999987543
No 282
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=68.44 E-value=4.9 Score=39.66 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=27.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
.+|+|+|||.+|+..|-.|... |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999988763 64 588888764
No 283
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=68.38 E-value=4.9 Score=41.78 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=28.3
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
...+|+|+|+|.||+..|..|... |. ++.++|+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecc
Confidence 356899999999999999998763 54 58999885
No 284
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=68.31 E-value=9.6 Score=36.34 Aligned_cols=101 Identities=15% Similarity=0.240 Sum_probs=56.2
Q ss_pred ccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcC--CCchh----chhhcc-ccCCCC
Q 010990 235 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD--SLQHF----KKPWAH-EHEPVN 306 (496)
Q Consensus 235 ~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~--~l~~~----k~~~a~-~~~~~~ 306 (496)
++.+|+|.|| |-.|-.+++.|++ .|. +++.+|++. ...+ .+... +..+.. +-....
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 65 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KGY-------EVYGADRRS----GEFASWRLKELGIENDVKIIHMDLLEFS 65 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEECSCC----STTTTHHHHHTTCTTTEEECCCCTTCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCC-------EEEEEECCC----cccccccHhhccccCceeEEECCCCCHH
Confidence 4568999998 7788788877764 353 688887742 1000 00000 001111 111123
Q ss_pred CHHHHhcccCCcEEEEccCCCCC------C----------CHHHHHHHHccCC-CceEEecC
Q 010990 307 NLLDAVKVIKPTILIGSSGVGRT------F----------TKEVIEAMASFNE-KPLILALS 351 (496)
Q Consensus 307 ~L~e~v~~vkptvLIG~S~~~g~------F----------t~evv~~M~~~~~-rPIIFaLS 351 (496)
++.++++.+++|++|=+.+.... + +..+++++.+... +.|||.=|
T Consensus 66 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 66 NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 57778887789999988875421 0 2345555554443 67787644
No 285
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=68.17 E-value=4.7 Score=40.70 Aligned_cols=37 Identities=16% Similarity=0.281 Sum_probs=29.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 283 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi 283 (496)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~~-----~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGFE-----GRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCcC-----CeEEEEECCCCC
Confidence 489999999999999998865 3642 469999886543
No 286
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=67.62 E-value=4.1 Score=38.62 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=23.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
||.|+|+|..|..+|..|.. |. +++++|++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCC
Confidence 79999999999999988742 43 47888764
No 287
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=67.62 E-value=4.6 Score=39.25 Aligned_cols=35 Identities=11% Similarity=0.229 Sum_probs=28.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 283 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi 283 (496)
..|+|+|||.+|+.+|-.|.+. |. ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-----G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-----GL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCCCC
Confidence 4799999999999999988753 64 69999987543
No 288
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=67.59 E-value=5.9 Score=38.96 Aligned_cols=92 Identities=22% Similarity=0.238 Sum_probs=50.0
Q ss_pred CchhHHHHHHHHHHHH-HhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCC
Q 010990 213 QGTASVVLAGVVAALK-LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL 291 (496)
Q Consensus 213 QGTa~V~LAgll~Alr-~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l 291 (496)
++.....++..+.+++ ..+. ..++|+|.|||..|...+.+... .|. ++++.+|+. ..| +
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~ 202 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSGV--SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---L 202 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTCC--TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---H
T ss_pred HHHhhhHHHHHHHHHHHhCCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---H
Confidence 3333334444566666 4433 78899999998777766655432 364 468888763 111 1
Q ss_pred chhchhhcccc--CCCCCHHHHhcc---cCCcEEEEccC
Q 010990 292 QHFKKPWAHEH--EPVNNLLDAVKV---IKPTILIGSSG 325 (496)
Q Consensus 292 ~~~k~~~a~~~--~~~~~L~e~v~~---vkptvLIG~S~ 325 (496)
...++ +|... ....++.+.++. -++|++|=+++
T Consensus 203 ~~~~~-la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (343)
T 2dq4_A 203 AFARP-YADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSG 240 (343)
T ss_dssp GGGTT-TCSEEECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred HHHHH-hHHhccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence 11111 12211 112356565553 25788887765
No 289
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=67.44 E-value=20 Score=34.89 Aligned_cols=101 Identities=14% Similarity=0.202 Sum_probs=60.3
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch-hchhhcc-ccC-CCCCH
Q 010990 233 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHE-PVNNL 308 (496)
Q Consensus 233 ~l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~-~k~~~a~-~~~-~~~~L 308 (496)
++...||+|.|| |-.|-.+++.|++. .| -+++.+|+.. .+...+.. .+..+.+ +-. ...++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 366789999995 88888888877653 23 3688888742 11111110 1111211 111 22357
Q ss_pred HHHhcccCCcEEEEccCCCC----------------CCCHHHHHHHHccCCCceEEecC
Q 010990 309 LDAVKVIKPTILIGSSGVGR----------------TFTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 309 ~e~v~~vkptvLIG~S~~~g----------------~Ft~evv~~M~~~~~rPIIFaLS 351 (496)
.+++++ +|++|=+.+... .-|..+++++.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 777875 999997666432 12567899888777 78888665
No 290
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=67.33 E-value=4.7 Score=40.49 Aligned_cols=37 Identities=24% Similarity=0.311 Sum_probs=29.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 283 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi 283 (496)
+..|||+|||.+|+..|-.|.+ .|. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 4579999999999999988865 364 379999987553
No 291
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=67.23 E-value=4.6 Score=41.44 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=26.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
||||+|+|.||+..|..|.+. |.+ -+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~~-----~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DKE-----SDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CSS-----SCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CCC-----CcEEEEeCCC
Confidence 799999999999999888653 531 3689998764
No 292
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=67.17 E-value=5.1 Score=39.93 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=26.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecCC
Confidence 699999999999999998763 63 688888753
No 293
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=67.13 E-value=6.7 Score=38.55 Aligned_cols=86 Identities=19% Similarity=0.090 Sum_probs=54.7
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcc
Q 010990 236 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 314 (496)
Q Consensus 236 d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~ 314 (496)
+.||+++|+ |..|--+++.+.+. |. +-++.+|.+.- +. + .+ ..+-..++.|+.+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-----g~------~~V~~V~p~~~---g~-~-------~~--G~~vy~sl~el~~~ 62 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-----GT------KMVGGVTPGKG---GT-T-------HL--GLPVFNTVREAVAA 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-----TC------EEEEEECTTCT---TC-E-------ET--TEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-----CC------eEEEEeCCCcc---cc-e-------eC--CeeccCCHHHHhhc
Confidence 469999999 99887777765442 54 35677777411 00 1 00 01113678898875
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHccCCCceE
Q 010990 315 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLI 347 (496)
Q Consensus 315 vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPII 347 (496)
.++|+.| +.+++ .+..+++++..+...+.+|
T Consensus 63 ~~~D~vi-I~tP~-~~~~~~~~ea~~~Gi~~iV 93 (288)
T 2nu8_A 63 TGATASV-IYVPA-PFCKDSILEAIDAGIKLII 93 (288)
T ss_dssp HCCCEEE-ECCCG-GGHHHHHHHHHHTTCSEEE
T ss_pred CCCCEEE-EecCH-HHHHHHHHHHHHCCCCEEE
Confidence 5699888 44433 5788999988877666533
No 294
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=67.05 E-value=3.7 Score=39.23 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=27.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
...+|+|+|||.||+..|..|... |. ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 356899999999999999988652 54 5888987
No 295
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=66.94 E-value=13 Score=33.07 Aligned_cols=50 Identities=16% Similarity=0.189 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 219 VLAGVVAALKLIGGTLAEHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 219 ~LAgll~Alr~~g~~l~d~riv~~G-AG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.++..+.+++-...--..++++|.| +|..|..++.++... |. +++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G~-------~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-----GA-------RIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-----TC-------EEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-----CC-------EEEEEeCC
Confidence 4444455554333333568999999 488888787766542 53 57777763
No 296
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=66.73 E-value=3.6 Score=39.04 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=26.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
...+|+|+|||.||+..|..|.+ .|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 35689999999999999988864 254 57788854
No 297
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=66.67 E-value=15 Score=34.95 Aligned_cols=93 Identities=12% Similarity=0.189 Sum_probs=57.3
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 010990 237 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 314 (496)
Q Consensus 237 ~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~ 314 (496)
.||+|.|| |-.|-.+++.|++ .|. +++.+++. .+..+ +. ...+.. +-. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g~-------~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DGN-------TPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CCC-------EEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 8888888888765 253 68888875 22111 21 111111 112 345667777
Q ss_pred cCCcEEEEccCCCCC------------CCHHHHHHHHccCCCceEEecC
Q 010990 315 IKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 315 vkptvLIG~S~~~g~------------Ft~evv~~M~~~~~rPIIFaLS 351 (496)
++|++|=+.+..+. -+..+++++.+..-+-+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 59999988775432 1467888887766566887544
No 298
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=66.51 E-value=5.2 Score=42.63 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=29.0
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999999865 364 599999874
No 299
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=66.37 E-value=4.9 Score=39.71 Aligned_cols=36 Identities=14% Similarity=0.279 Sum_probs=29.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 283 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi 283 (496)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 3579999999999999998875 364 69999987654
No 300
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=66.37 E-value=19 Score=34.16 Aligned_cols=94 Identities=13% Similarity=0.227 Sum_probs=53.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 010990 238 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 315 (496)
Q Consensus 238 riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~v 315 (496)
+|+|.|| |-.|-.+++.|++ .| .++.+++.. ..+.+.+... ..+.. +-.. .++.++++
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-----~g--------~~v~~~~~~---~~~~~~~~~~-~~~~~~Dl~~-~~~~~~~~-- 62 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSE-----SN--------EIVVIDNLS---SGNEEFVNEA-ARLVKADLAA-DDIKDYLK-- 62 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-----TS--------CEEEECCCS---SCCGGGSCTT-EEEECCCTTT-SCCHHHHT--
T ss_pred EEEEECCCchHHHHHHHHHHh-----CC--------CEEEEEcCC---CCChhhcCCC-cEEEECcCCh-HHHHHHhc--
Confidence 7899997 7777777777653 23 344444321 1111111111 11111 2223 67888887
Q ss_pred CCcEEEEccCCCCC-C---------------CHHHHHHHHccCCCceEEecC
Q 010990 316 KPTILIGSSGVGRT-F---------------TKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 316 kptvLIG~S~~~g~-F---------------t~evv~~M~~~~~rPIIFaLS 351 (496)
++|++|-+.+.... . +..++++|.+..-+.|||.=|
T Consensus 63 ~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 63 GAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp TCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 59999988775421 1 234778887766678898655
No 301
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=66.35 E-value=4.9 Score=41.52 Aligned_cols=38 Identities=18% Similarity=0.311 Sum_probs=28.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+|+|+|||.||+..|..|.+... .|++. .++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~--~G~~~----~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQE--KGAEI----PELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHH--TTCCC----CEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhh--cCCCC----CcEEEEEcC
Confidence 489999999999999999876321 36520 138899886
No 302
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=66.27 E-value=6.2 Score=39.83 Aligned_cols=38 Identities=18% Similarity=0.173 Sum_probs=30.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 283 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi 283 (496)
..+|||+|+|.||+..|..|.+. |.+ .++.++|++.-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~~-----~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GYQ-----GLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TCC-----SCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CCC-----CeEEEEECCCCC
Confidence 45899999999999999998764 541 369999987644
No 303
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=66.27 E-value=4.6 Score=46.81 Aligned_cols=38 Identities=24% Similarity=0.351 Sum_probs=34.2
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 232 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 232 ~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
++|++.||+|+|+|..|.-||..|+.+ |+ ++|.++|.+
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 358899999999999999999999876 87 799999987
No 304
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=66.22 E-value=9.7 Score=37.34 Aligned_cols=90 Identities=23% Similarity=0.352 Sum_probs=48.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 316 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 316 (496)
+||-|+|-|..|.++|..|++. |. +++++|+. ..+ ..+.++.-+ ....|+.|+++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr~----~~~---~~~l~~~G~---~~~~s~~e~~~~-- 61 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNRT----ASK---AEPLTKLGA---TVVENAIDAITP-- 61 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC--------------CTTTTTTC---EECSSGGGGCCT--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeCC----HHH---HHHHHHcCC---eEeCCHHHHHhc--
Confidence 5899999999999999999763 65 57777763 222 222211111 123567777765
Q ss_pred CcEEEEccCCCC----CCCHHHHHHHHccCCCceEEecCCC
Q 010990 317 PTILIGSSGVGR----TFTKEVIEAMASFNEKPLILALSNP 353 (496)
Q Consensus 317 ptvLIG~S~~~g----~Ft~evv~~M~~~~~rPIIFaLSNP 353 (496)
.|++|=+-..+. .+..+++..+. +.-||.=+|+=
T Consensus 62 ~dvvi~~l~~~~~~~~v~~~~~~~~~~---~~~iiid~sT~ 99 (297)
T 4gbj_A 62 GGIVFSVLADDAAVEELFSMELVEKLG---KDGVHVSMSTI 99 (297)
T ss_dssp TCEEEECCSSHHHHHHHSCHHHHHHHC---TTCEEEECSCC
T ss_pred CCceeeeccchhhHHHHHHHHHHhhcC---CCeEEEECCCC
Confidence 677664322111 12333344432 34466666653
No 305
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=66.21 E-value=5.9 Score=38.68 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=27.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G~-------~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KGY-------SVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeccC
Confidence 4589999999999999998854 353 699999864
No 306
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=66.07 E-value=4 Score=38.32 Aligned_cols=90 Identities=11% Similarity=0.138 Sum_probs=53.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 316 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 316 (496)
.||.|+|+|..|..+|..|.. .| .+++++|++ . +......+.+ ......++.|+++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~~~~-- 60 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS----L---ERSKEIAEQL--ALPYAMSHQDLIDQ-- 60 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS----H---HHHHHHHHHH--TCCBCSSHHHHHHT--
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC----H---HHHHHHHHHc--CCEeeCCHHHHHhc--
Confidence 489999999999999888753 24 367888764 1 1111111111 11123578888874
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCC
Q 010990 317 PTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 354 (496)
Q Consensus 317 ptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt 354 (496)
+|++|=+ ..+ ...+++++.+. +..+|.-+++-.
T Consensus 61 ~D~Vi~~-v~~-~~~~~v~~~l~---~~~~vv~~~~~~ 93 (259)
T 2ahr_A 61 VDLVILG-IKP-QLFETVLKPLH---FKQPIISMAAGI 93 (259)
T ss_dssp CSEEEEC-SCG-GGHHHHHTTSC---CCSCEEECCTTC
T ss_pred CCEEEEE-eCc-HhHHHHHHHhc---cCCEEEEeCCCC
Confidence 8887733 323 34567776653 344666665543
No 307
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=65.81 E-value=5.4 Score=40.88 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=27.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4689999999999999988764 25 379999986
No 308
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=65.61 E-value=17 Score=38.64 Aligned_cols=120 Identities=20% Similarity=0.141 Sum_probs=77.6
Q ss_pred CCCceeecCCCc---hhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 010990 203 TTHLVFNDDIQG---TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 261 (496)
Q Consensus 203 ~~~~~FnDDiQG---Ta~V~LAgll~Alr~------------------~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~ 261 (496)
..+.+.|----. +|=-++|.+|+..|- .|..|...++.|+|.|..|-.+|+.+...
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~--- 164 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAF--- 164 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHTT---
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHhC---
Confidence 466777654333 344578888887653 24578899999999999999999988542
Q ss_pred hcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-cCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHH
Q 010990 262 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 336 (496)
Q Consensus 262 ~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evv~ 336 (496)
|+ +++.+|+.- . ..+ +.+ .-...++.|+++. +|+++=+- ...+.++++.+.
T Consensus 165 --G~-------~V~~~d~~~----~------~~~---a~~~g~~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~ 220 (529)
T 1ygy_A 165 --GA-------YVVAYDPYV----S------PAR---AAQLGIELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALA 220 (529)
T ss_dssp --TC-------EEEEECTTS----C------HHH---HHHHTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHT
T ss_pred --CC-------EEEEECCCC----C------hhH---HHhcCcEEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHh
Confidence 54 588887641 1 100 111 1111378899987 89887442 223567777776
Q ss_pred HHHccCCCceEEecCC
Q 010990 337 AMASFNEKPLILALSN 352 (496)
Q Consensus 337 ~M~~~~~rPIIFaLSN 352 (496)
.|. +..+|.=.|.
T Consensus 221 ~~k---~g~ilin~ar 233 (529)
T 1ygy_A 221 KTK---PGVIIVNAAR 233 (529)
T ss_dssp TSC---TTEEEEECSC
T ss_pred CCC---CCCEEEECCC
Confidence 664 5678887773
No 309
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=65.28 E-value=33 Score=34.99 Aligned_cols=131 Identities=18% Similarity=0.225 Sum_probs=84.9
Q ss_pred HHHhhCCCeeeEeeeCCCccHHHHHHHHcCCCceee--cCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHH
Q 010990 174 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGI 251 (496)
Q Consensus 174 v~~~fGp~~li~~EDf~~~~af~iL~~yr~~~~~Fn--DDiQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~Gi 251 (496)
+-.+| .++++ +-.++. .+.+.|.+|- ++||.| || .---+=+||=++.=.+..| +++..||+++|-+ . .+
T Consensus 121 vLs~y-~D~Iv-iR~~~~-~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~-~--nv 191 (340)
T 4ep1_A 121 VLSHY-IDGIM-IRTFSH-ADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDG-N--NV 191 (340)
T ss_dssp HHHHH-CSEEE-EECSCH-HHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC-C--HH
T ss_pred HHHHh-CCEEE-EecCCh-hHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCC-c--hh
Confidence 44556 56544 666653 4445555553 699999 65 4556677888887777766 4999999999998 3 37
Q ss_pred HHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc----CCCCCHHHHhcccCCcEEEEccCC
Q 010990 252 AELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSSGV 326 (496)
Q Consensus 252 A~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~----~~~~~L~e~v~~vkptvLIG~S~~ 326 (496)
|+-++.++.+ -|+ +|.++=.+|+.-.. .+-+.-+.+|+.. ....++.|+|++ +||+.-..=+
T Consensus 192 a~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w~ 257 (340)
T 4ep1_A 192 CHSLLLASAK-VGM-------HMTVATPVGYRPNE---EIVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVWM 257 (340)
T ss_dssp HHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC-
T ss_pred HHHHHHHHHH-cCC-------EEEEECCcccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCcc
Confidence 8888887766 365 68888887774321 0111112333321 123689999998 9999876543
No 310
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=65.28 E-value=80 Score=31.38 Aligned_cols=127 Identities=15% Similarity=0.147 Sum_probs=87.7
Q ss_pred HHHhhCCCeeeEeeeCCCccHHHHHHHHcCCCceee--cCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCc--ChHHH
Q 010990 174 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGA--GEAGT 249 (496)
Q Consensus 174 v~~~fGp~~li~~EDf~~~~af~iL~~yr~~~~~Fn--DDiQGTa~V~LAgll~Alr~~g~~l~d~riv~~GA--G~Ag~ 249 (496)
+-.+||.++++ +-.++...+..++.+| .++||.| |-.+---+=+||=++.=.+..| +|++.||+++|- |+
T Consensus 85 vls~~~~D~iv-iR~~~~~~~~~~la~~-~~vPVINAG~g~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGDl~~~--- 158 (291)
T 3d6n_B 85 TFEGLGFDYVV-FRVPFVFFPYKEIVKS-LNLRLVNAGDGTHQHPSQGLIDFFTIKEHFG-EVKDLRVLYVGDIKHS--- 158 (291)
T ss_dssp HHHHTTCSEEE-EEESSCCCSCHHHHHT-CSSEEEEEEETTTBCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCTTC---
T ss_pred HHHHhcCCEEE-EEcCChHHHHHHHHHh-CCCCEEeCccCCCcCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCCC---
Confidence 55678656544 6777666655536666 4799999 5556666678888887777665 699999999999 62
Q ss_pred HHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEEccCC
Q 010990 250 GIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGV 326 (496)
Q Consensus 250 GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~ 326 (496)
-+|+-++.++.+ -|+ ++.++-.+|+.-.. +.. + ...-..++.|++++ +||+.-+-.+
T Consensus 159 rva~Sl~~~~~~-~g~-------~v~~~~P~~~~p~~----~~~----~--g~~~~~d~~eav~~--aDvvy~~~~q 215 (291)
T 3d6n_B 159 RVFRSGAPLLNM-FGA-------KIGVCGPKTLIPRD----VEV----F--KVDVFDDVDKGIDW--ADVVIWLRLQ 215 (291)
T ss_dssp HHHHHHHHHHHH-TTC-------EEEEESCGGGSCTT----GGG----G--CEEEESSHHHHHHH--CSEEEECCCC
T ss_pred chHHHHHHHHHH-CCC-------EEEEECCchhCCch----HHH----C--CCEEEcCHHHHhCC--CCEEEEeCcc
Confidence 577777777766 375 69999888884321 211 1 01113689999998 9999985443
No 311
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=65.23 E-value=23 Score=37.14 Aligned_cols=40 Identities=20% Similarity=0.251 Sum_probs=26.5
Q ss_pred HHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 228 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 228 r~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+..++...-.||.|+|+|..|.++|.++.+ | -+++++|++
T Consensus 28 ~~~~r~~~~mkIaVIGlG~mG~~lA~~La~------G-------~~V~~~D~~ 67 (432)
T 3pid_A 28 QQMGRGSEFMKITISGTGYVGLSNGVLIAQ------N-------HEVVALDIV 67 (432)
T ss_dssp -------CCCEEEEECCSHHHHHHHHHHHT------T-------SEEEEECSC
T ss_pred cccccccCCCEEEEECcCHHHHHHHHHHHc------C-------CeEEEEecC
Confidence 445556666799999999999999987642 4 358888864
No 312
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=65.08 E-value=5.8 Score=39.12 Aligned_cols=49 Identities=16% Similarity=0.100 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 219 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 219 ~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.++..+.|++..+. ..++|+|.|||..|...+.++.. .|. ++++.+|+.
T Consensus 153 ~~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~ 201 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEPS 201 (348)
T ss_dssp HHHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC
T ss_pred HHHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC
Confidence 34444566643333 78899999998888777665543 364 468877753
No 313
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=64.68 E-value=8.3 Score=41.61 Aligned_cols=37 Identities=11% Similarity=0.286 Sum_probs=30.2
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
+++.+|+|+|||.||+..|-.|.. .|+ ++.++|+.-.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCC
Confidence 556899999999999999988865 364 6999999843
No 314
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=64.38 E-value=4.5 Score=41.04 Aligned_cols=39 Identities=15% Similarity=0.261 Sum_probs=28.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhc-CcEEEEcCCCc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETR-KKICLVDSKGL 282 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~-~~i~~vD~~GL 282 (496)
..+|||+|||.||+..|..|.+. |. +.. -++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~-----g~---~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQER-----AQ---AQGALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHH-----HH---HHCCCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhc-----cc---ccCcccEEEEecCCC
Confidence 34799999999999999999764 31 000 36899988753
No 315
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=64.32 E-value=45 Score=33.37 Aligned_cols=134 Identities=13% Similarity=0.128 Sum_probs=85.4
Q ss_pred HHHHHHHHHhhCCCeeeEeeeCCCccHHHHHHHHcCCCceee--cCCCchhHHHHHHHHHHHHHhCCCcc-cceEEEeCc
Q 010990 168 DEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLA-EHRFLFLGA 244 (496)
Q Consensus 168 defv~av~~~fGp~~li~~EDf~~~~af~iL~~yr~~~~~Fn--DDiQGTa~V~LAgll~Alr~~g~~l~-d~riv~~GA 244 (496)
...++ +-.+| .++ |-+-.++. .+.+.|.+|- ++||.| || +---+=+||=++.=.+..| +++ +.||+++|-
T Consensus 82 ~DTar-vls~~-~D~-iviR~~~~-~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g-~l~~gl~va~vGD 154 (307)
T 3tpf_A 82 KDTAR-VIGAM-VDF-VMMRVNKH-ETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEWNK-MQNGIAKVAFIGD 154 (307)
T ss_dssp HHHHH-HHHHH-SSE-EEEECSCH-HHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHTTC-CGGGCCEEEEESC
T ss_pred HHHHH-HHHHh-CCE-EEEecCCh-HHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHHhC-CCCCCCEEEEEcC
Confidence 33444 44456 554 44666653 4445555654 699998 66 5566677888777666555 699 999999999
Q ss_pred ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc----CCCCCHHHHhcccCCcEE
Q 010990 245 GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTIL 320 (496)
Q Consensus 245 G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~----~~~~~L~e~v~~vkptvL 320 (496)
|. -+|+-++.++.+ -|+ +|.++=.+|+.-.. .+-...+.+|+.. ....++.|+|++ +||+
T Consensus 155 ~~---~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDvv 218 (307)
T 3tpf_A 155 SN---NMCNSWLITAAI-LGF-------EISIAMPKNYKISP---EIWEFAMKQALISGAKISLGYDKFEALKD--KDVV 218 (307)
T ss_dssp SS---HHHHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHTCEEEEESCHHHHHTT--CSEE
T ss_pred CC---ccHHHHHHHHHH-cCC-------EEEEECCCccCCCH---HHHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCEE
Confidence 73 488888887766 365 68888888773321 0111112333321 123689999998 9999
Q ss_pred EEcc
Q 010990 321 IGSS 324 (496)
Q Consensus 321 IG~S 324 (496)
.-..
T Consensus 219 yt~~ 222 (307)
T 3tpf_A 219 ITDT 222 (307)
T ss_dssp EECC
T ss_pred EecC
Confidence 8654
No 316
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=63.98 E-value=5.7 Score=42.31 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=28.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 35689999999999999998865 354 699999864
No 317
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=63.91 E-value=5.4 Score=40.58 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=28.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
...+|+|+|||.||+..|..|.+ .|.. .++.++|++
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecC
Confidence 35689999999999999998864 3541 278999986
No 318
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=63.79 E-value=6.7 Score=40.06 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=27.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g~-------~V~liE~~ 38 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----GF-------KTTCIEKR 38 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 45799999999999999888653 53 69999987
No 319
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=63.59 E-value=6.2 Score=39.93 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=27.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
.+|||+|||.||+..|..|.+. . .| -++.++|++-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~--~-~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL--M-PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH--C-TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC--C-CC-------CeEEEECCCC
Confidence 5899999999999999998762 0 12 4789998864
No 320
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=63.40 E-value=3.4 Score=43.50 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=25.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.||||+|+|.||+..|+.|.. .+ -+|.++|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 589999999999998877632 12 369999986
No 321
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=63.30 E-value=6.7 Score=37.97 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=27.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999998753 64 68899874
No 322
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=63.27 E-value=4.8 Score=41.30 Aligned_cols=38 Identities=16% Similarity=0.203 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 283 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi 283 (496)
..+|||+|||.||+..|..|.+. ..| .+|.++|++.-+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~---~~g-------~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL---DPE-------AHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH---CTT-------SEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhh---CcC-------CCEEEEECCCcc
Confidence 46899999999999999988653 012 479999987543
No 323
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=63.25 E-value=6.2 Score=40.65 Aligned_cols=33 Identities=30% Similarity=0.549 Sum_probs=27.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 4689999999999999998865 25 369999986
No 324
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=63.14 E-value=6 Score=40.23 Aligned_cols=36 Identities=19% Similarity=0.373 Sum_probs=28.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
.+|||+|||.||+..|..|.+.+. .| -+|.++|++-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCC
Confidence 589999999999999999976431 13 3688888764
No 325
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=63.06 E-value=5.9 Score=40.70 Aligned_cols=35 Identities=20% Similarity=0.296 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 4589999999999999988765 364 6999998654
No 326
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=62.99 E-value=6.5 Score=36.39 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=26.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+-+|+|+|+|.+|+..|..|.+ .|+ ++.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-----~g~-------~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-----KGV-------RVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 4579999999999999988865 253 68888875
No 327
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=62.82 E-value=21 Score=31.59 Aligned_cols=91 Identities=11% Similarity=0.166 Sum_probs=51.7
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchh--chhhcc-ccCCCCCHHHHhc
Q 010990 238 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWAH-EHEPVNNLLDAVK 313 (496)
Q Consensus 238 riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~--k~~~a~-~~~~~~~L~e~v~ 313 (496)
||+|.|| |-.|-.+++.|++ .| -+++.++++. +.+... ...+.+ +-....+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~-------~~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA-------GKITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS-------HHHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc-------hhhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 8888888887764 25 3688887741 111110 001111 1011111 6676
Q ss_pred ccCCcEEEEccCCCCC-------CCHHHHHHHHccCCCceEEecC
Q 010990 314 VIKPTILIGSSGVGRT-------FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 314 ~vkptvLIG~S~~~g~-------Ft~evv~~M~~~~~rPIIFaLS 351 (496)
. +|++|=+.+.... .++.++++|.+....-+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 5 8999987775422 1367888887654455666544
No 328
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=62.55 E-value=6.1 Score=37.82 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=29.8
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+|++.++||+|+|..|..-+++|+.+ | -++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 47889999999999999999988764 5 368888864
No 329
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=62.53 E-value=10 Score=37.53 Aligned_cols=57 Identities=21% Similarity=0.145 Sum_probs=35.8
Q ss_pred CCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 211 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 211 DiQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
+.++.....++..+.|++..+.+ ..++|+|+|||..|...+.+.. + .|. ++++.+|+
T Consensus 156 ~~~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 156 YENGAMLEPLSVALAGLQRAGVR-LGDPVLICGAGPIGLITMLCAK-A----AGA------CPLVITDI 212 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCC-TTCCEEEECCSHHHHHHHHHHH-H----TTC------CSEEEEES
T ss_pred HHHHHhhhHHHHHHHHHHHcCCC-CCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECC
Confidence 33444444555666777666544 4568999999877766554443 2 365 56888875
No 330
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=62.47 E-value=6 Score=40.87 Aligned_cols=35 Identities=29% Similarity=0.400 Sum_probs=28.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
.+.+|+|+|||.||+..|..+.+ .| .++.++|++-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-----YG-------AKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TS-------CCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 35689999999999999998865 25 3699999863
No 331
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=62.43 E-value=67 Score=32.20 Aligned_cols=132 Identities=14% Similarity=0.170 Sum_probs=86.3
Q ss_pred HHHHhhCCCeeeEeeeCCCccHHHHHHHHcCCCceee--cCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHH
Q 010990 173 AVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTG 250 (496)
Q Consensus 173 av~~~fGp~~li~~EDf~~~~af~iL~~yr~~~~~Fn--DDiQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~G 250 (496)
.+-.+| .++ |-+-.++.. +.+.+.+|-.++||.| |..+---+=+||=++.=.+..| +|++.||+++|-|.=+ -
T Consensus 93 rvls~~-~D~-iviR~~~~~-~~~~la~~~~~vPVINag~G~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~~-r 167 (310)
T 3csu_A 93 SVISTY-VDA-IVMRHPQEG-AARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQG-RLDNLHVAMVGDLKYG-R 167 (310)
T ss_dssp HHHTTT-CSE-EEEEESSTT-HHHHHHHHCTTCCEEEEEETTSCCHHHHHHHHHHHHHHHS-CSSSCEEEEESCTTTC-H
T ss_pred HHHHHh-CCE-EEEECCChh-HHHHHHHhcCCCCEEcCccCCCCCchHHHHHHHHHHHHhC-CcCCcEEEEECCCCCC-c
Confidence 344567 454 447777654 4566677764799999 4244555567788877766665 6999999999997421 3
Q ss_pred HHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccC----CCCCHHHHhcccCCcEEEEccC
Q 010990 251 IAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE----PVNNLLDAVKVIKPTILIGSSG 325 (496)
Q Consensus 251 iA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~----~~~~L~e~v~~vkptvLIG~S~ 325 (496)
+|+-++.++.+-.|+ ++.++-.+|+-- ++.-..+++... ...++.|++++ +||+.-..-
T Consensus 168 va~Sl~~~~~~~~g~-------~v~~~~P~~~~~-------~~~~~~~~~~~g~~~~~~~d~~eav~~--aDvvyt~~~ 230 (310)
T 3csu_A 168 TVHSLTQALAKFDGN-------RFYFIAPDALAM-------PQYILDMLDEKGIAWSLHSSIEEVMAE--VDILYMTRV 230 (310)
T ss_dssp HHHHHHHHHHTSSSC-------EEEEECCGGGCC-------CHHHHHHHHHTTCCEEECSCGGGTTTT--CSEEEECC-
T ss_pred hHHHHHHHHHhCCCC-------EEEEECCccccc-------CHHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEECCc
Confidence 677777777652265 688888887732 222223333221 23689999998 999997643
No 332
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=62.37 E-value=6.2 Score=37.23 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=25.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+|+|+|||.||+..|..+.+ .|. ++.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999988764 253 57777653
No 333
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=62.32 E-value=6.4 Score=40.68 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=27.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+.+|+|+|||.||+..|..+.+ .|. ++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G~-------~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LGM-------KVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCC
Confidence 4689999999999999988865 353 699999754
No 334
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=62.22 E-value=9.2 Score=38.91 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=28.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
..+|||+|||.||+..|..|.+. |- ..++.++|+..-
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCCc
Confidence 46899999999999999988653 21 147888988753
No 335
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=62.18 E-value=6.1 Score=40.66 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=28.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
++.+|||+|+|.||+..|..+.+ .| .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 35689999999999999998854 25 3799999874
No 336
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=62.09 E-value=5.8 Score=41.48 Aligned_cols=32 Identities=22% Similarity=0.204 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.||.|+|+|..|..+|..|... |. +++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G~-------~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----GA-------NVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----CC-------EEEEEECC
Confidence 4899999999999999998763 53 68888875
No 337
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=62.06 E-value=36 Score=35.59 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=27.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
..||.|+|+|.-|..+|..|.+. |. +++++|++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-----G~-------~V~~~D~~ 40 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-----GH-------EVVCVDKD 40 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 46999999999999999999763 53 68888875
No 338
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=62.04 E-value=7.5 Score=38.84 Aligned_cols=33 Identities=21% Similarity=0.398 Sum_probs=26.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
+|+|+|||.+|+..|-.|.+. | .++.++|+..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-----G-------HEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----T-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCCC
Confidence 799999999999999988653 5 36888888643
No 339
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=62.01 E-value=28 Score=32.96 Aligned_cols=79 Identities=15% Similarity=0.204 Sum_probs=41.4
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHH
Q 010990 231 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 310 (496)
Q Consensus 231 g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e 310 (496)
..+++++++||.||++ ||...++..+.+ +|. +++++|++.- .+......+.-+-....++.+
T Consensus 9 ~~~~~~k~vlVTGas~---GIG~aia~~l~~-~G~-------~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~~ 70 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSS---GIGLAVVDALVR-YGA-------KVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVKE 70 (269)
T ss_dssp -CTTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEEEESCC---------CTTSSEEEECCTTCHHHHHH
T ss_pred ccCCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCch-------hccCceeEEEecCCCHHHHHH
Confidence 4568899999999864 333334444433 364 5888876421 111111111112112234555
Q ss_pred Hhccc-----CCcEEEEccCCC
Q 010990 311 AVKVI-----KPTILIGSSGVG 327 (496)
Q Consensus 311 ~v~~v-----kptvLIG~S~~~ 327 (496)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 71 AVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcC
Confidence 55544 799999776643
No 340
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=61.97 E-value=11 Score=35.85 Aligned_cols=78 Identities=14% Similarity=0.169 Sum_probs=43.3
Q ss_pred CcccceEEEeCcC-h--HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc------ccC
Q 010990 233 TLAEHRFLFLGAG-E--AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHE 303 (496)
Q Consensus 233 ~l~d~riv~~GAG-~--Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~------~~~ 303 (496)
.+++.+++|.||. . .|.++|+.|++ +|. +++++|++-+ . +.+...+..+.+ +-.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~~~--~---~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EGA-------ELAFTYVGQF--K---DRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TTC-------EEEEEECTTC--H---HHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cCC-------EEEEeeCchH--H---HHHHHHHHhcCCceEEEeecC
Confidence 4778899999984 3 56666666654 363 5888887630 0 111111111111 111
Q ss_pred CCCCHHHHhccc-----CCcEEEEccCCC
Q 010990 304 PVNNLLDAVKVI-----KPTILIGSSGVG 327 (496)
Q Consensus 304 ~~~~L~e~v~~v-----kptvLIG~S~~~ 327 (496)
...++.++++.+ ++|+||=..+..
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~ 114 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFA 114 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 112455555544 789999877754
No 341
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=61.95 E-value=14 Score=37.18 Aligned_cols=89 Identities=8% Similarity=0.088 Sum_probs=52.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc--CCCCCHHHHhcc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 314 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~--~~~~~L~e~v~~ 314 (496)
.||.|+|+|..|..+|..|... | .+++.+|++- + +...+... ....++.|+++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~~-------~-----~~~~a~~~G~~~~~~~~e~~~~ 64 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRSR-------S-----GAKSAVDEGFDVSADLEATLQR 64 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSCH-------H-----HHHHHHHTTCCEESCHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCCH-------H-----HHHHHHHcCCeeeCCHHHHHHh
Confidence 5899999999999999988753 5 3688888741 1 11111111 112567776654
Q ss_pred c--CCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecC
Q 010990 315 I--KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 315 v--kptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLS 351 (496)
. .+|++| ++.+.. -++++++.+....+.-||.=+|
T Consensus 65 a~~~aDlVi-lavP~~-~~~~vl~~l~~~~~~~iv~Dv~ 101 (341)
T 3ktd_A 65 AAAEDALIV-LAVPMT-AIDSLLDAVHTHAPNNGFTDVV 101 (341)
T ss_dssp HHHTTCEEE-ECSCHH-HHHHHHHHHHHHCTTCCEEECC
T ss_pred cccCCCEEE-EeCCHH-HHHHHHHHHHccCCCCEEEEcC
Confidence 2 467766 444332 4667777766554444554443
No 342
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=61.82 E-value=7.8 Score=36.41 Aligned_cols=86 Identities=10% Similarity=0.236 Sum_probs=53.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 010990 238 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 316 (496)
Q Consensus 238 riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 316 (496)
||+|.|| |-.|-.+++.|+ . | -+++.+|++.-.... ++. ...++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~~~---D~~-----------d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEFCG---DFS-----------NPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSSCC---CTT-----------CHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEeccccccccc---cCC-----------CHHHHHHHHHhcC
Confidence 7899998 888877777764 2 4 368888775311110 111 1134777787778
Q ss_pred CcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010990 317 PTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 317 ptvLIG~S~~~g~----------------Ft~evv~~M~~~~~rPIIFaLS 351 (496)
+|++|=+.+.... -+..+++++.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999988875431 14567777765443 4887654
No 343
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=61.79 E-value=6.6 Score=41.08 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=27.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+.+|+|+|||.+|+..|-.|.. .|+ ++.++|+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 56789999999999999988865 375 47777764
No 344
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=61.79 E-value=8 Score=42.15 Aligned_cols=34 Identities=24% Similarity=0.449 Sum_probs=28.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
..+|||+|+|.||+..|..|.+. |. ++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G~-------~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----GY-------DVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 35899999999999999998763 54 699999863
No 345
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=61.78 E-value=6.7 Score=37.31 Aligned_cols=31 Identities=23% Similarity=0.363 Sum_probs=24.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
-|+|+|+|+||+..|..+.+ .|. ++.++|+.
T Consensus 8 DvvIIG~GpAGl~aA~~l~~-----~g~-------~V~liE~~ 38 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASR-----ANL-------KTVMIERG 38 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 58999999999999877754 354 68889874
No 346
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=61.76 E-value=6.9 Score=40.09 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~ 34 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LGM-------KTACVEKR 34 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 3589999999999999987765 253 69999987
No 347
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=61.63 E-value=5.5 Score=38.43 Aligned_cols=34 Identities=18% Similarity=0.237 Sum_probs=27.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
...+|+|+|+|.||+..|..|.. .|. ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAAR-----AQL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 45689999999999999998865 254 57888864
No 348
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=61.55 E-value=4.6 Score=39.15 Aligned_cols=35 Identities=23% Similarity=0.325 Sum_probs=26.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+|+|+|||.+|+..|..|.+.. ..|+ ++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G~-------~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGPL-------YLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CCE-------EEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCCc-------eEEEEECC
Confidence 37999999999999999886410 0243 68889876
No 349
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=61.54 E-value=5.8 Score=40.35 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+|+|+|||.||+..|-.|... |+ ++.++|+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5899999999999999888653 65 68888875
No 350
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=61.22 E-value=20 Score=34.22 Aligned_cols=97 Identities=13% Similarity=0.081 Sum_probs=57.9
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc----------c-ccC
Q 010990 236 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA----------H-EHE 303 (496)
Q Consensus 236 d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a----------~-~~~ 303 (496)
..+|+|.|| |-.|-.+++.|++ .|. +++++|+.. . ........+. + +-.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~G~-------~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-----HGY-------DVVIADNLV----N---SKREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEECCCS----S---SCTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-----CCC-------cEEEEecCC----c---chHHHHHHHHhhcCCCceEEEeecC
Confidence 458999996 6677777777654 353 688887641 1 1111111111 0 111
Q ss_pred CCCCHHHHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010990 304 PVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 304 ~~~~L~e~v~~vkptvLIG~S~~~g~----------------Ft~evv~~M~~~~~rPIIFaLS 351 (496)
...++.++++..++|++|=+.+.... -+..+++.|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 12357777876689999987775421 1346788887766678888644
No 351
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=61.03 E-value=7 Score=40.67 Aligned_cols=34 Identities=21% Similarity=0.405 Sum_probs=28.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+-.|+|+|||.+|+++|..|.. .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999998875 365 589999864
No 352
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=60.98 E-value=7.9 Score=38.41 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=26.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+|+|+|||.+|+..|..|.+. | .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCCC
Confidence 699999999999999988753 5 3688888763
No 353
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=60.95 E-value=6.8 Score=41.03 Aligned_cols=37 Identities=24% Similarity=0.408 Sum_probs=28.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
..+|||+|||.||+..|-.|...+. .|+ ++.++|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQA-------NITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEECCCC
Confidence 4689999999999999998875310 253 699999854
No 354
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=60.93 E-value=7 Score=41.27 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=29.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
..+|||+|||.||+..|..|..... .| -+|.++|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4589999999999999999876320 24 37999998643
No 355
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=60.89 E-value=12 Score=36.92 Aligned_cols=49 Identities=24% Similarity=0.221 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 219 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 219 ~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
.++..+.|++..+.+ ..++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGVT-LGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 444555666655443 45799999999777666554432 364 47888875
No 356
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=60.87 E-value=8.3 Score=40.62 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=29.1
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
-.+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRE-----LGR-------SVHVIETAG 49 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 345689999999999999998875 364 688999864
No 357
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=60.78 E-value=6.9 Score=40.00 Aligned_cols=33 Identities=27% Similarity=0.269 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LGL-------STAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4589999999999999988764 354 69999986
No 358
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=60.75 E-value=8.3 Score=37.96 Aligned_cols=149 Identities=15% Similarity=0.096 Sum_probs=82.5
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcc
Q 010990 236 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 314 (496)
Q Consensus 236 d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~ 314 (496)
+.||+++|| |..|--+++.+.+ .|. +-++-++.++- +. + . ...+-..++.|+.+.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~-----~g~------~~v~~VnP~~~---g~-~-i--------~G~~vy~sl~el~~~ 62 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLT-----YGT------KIVAGVTPGKG---GM-E-V--------LGVPVYDTVKEAVAH 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-----HTC------EEEEEECTTCT---TC-E-E--------TTEEEESSHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHH-----cCC------eEEEEECCCCC---Cc-e-E--------CCEEeeCCHHHHhhc
Confidence 468999999 9888777776544 264 34667777531 10 0 0 001112678888885
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHccCCC-ceEEecCCCCCCCCCCHHHHhcc--cCCcEEEecCCCCCCcccCCeeeC
Q 010990 315 IKPTILIGSSGVGRTFTKEVIEAMASFNEK-PLILALSNPTSQSECTAEEAYTW--SKGRAIFASGSPFDPFEYNGKVFV 391 (496)
Q Consensus 315 vkptvLIG~S~~~g~Ft~evv~~M~~~~~r-PIIFaLSNPt~~~E~~peda~~~--t~G~ai~AsGsPf~pv~~~G~~~~ 391 (496)
.+||+.| ...++ .+..++++...+..-+ -|||+--=| |-.-+++.+. ..|-.+++--+| -.+.
T Consensus 63 ~~~Dv~I-i~vp~-~~~~~~~~ea~~~Gi~~vVi~t~G~~----~~~~~~l~~~a~~~gi~vigPNc~--------Gii~ 128 (288)
T 1oi7_A 63 HEVDASI-IFVPA-PAAADAALEAAHAGIPLIVLITEGIP----TLDMVRAVEEIKALGSRLIGGNCP--------GIIS 128 (288)
T ss_dssp SCCSEEE-ECCCH-HHHHHHHHHHHHTTCSEEEECCSCCC----HHHHHHHHHHHHHHTCEEEESSSC--------EEEE
T ss_pred CCCCEEE-EecCH-HHHHHHHHHHHHCCCCEEEEECCCCC----HHHHHHHHHHHHHcCCEEEeCCCC--------eEEc
Confidence 5699988 44433 5788888888776554 355542212 2111122221 135556665554 2455
Q ss_pred ccCcccccccchh----hHHHHHhCCcccCHHHHHH
Q 010990 392 PGQANNAYIFPGF----GLGLVISGAIRVHDDMLLA 423 (496)
Q Consensus 392 p~Q~NN~~iFPGi----glG~l~~~a~~itd~m~~a 423 (496)
|+++.|.. ||+. |.=++.||.-.++.+++..
T Consensus 129 ~~~~~~~~-~~~~~~~~G~va~vsqSG~l~~~~~~~ 163 (288)
T 1oi7_A 129 AEETKIGI-MPGHVFKRGRVGIISRSGTLTYEAAAA 163 (288)
T ss_dssp TTTEEEES-SCGGGCCEEEEEEEESCHHHHHHHHHH
T ss_pred CCCceeEE-cccCCCCCCCEEEEECCHHHHHHHHHH
Confidence 67666655 3332 2234566655555555443
No 359
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=60.73 E-value=8.4 Score=39.24 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=29.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
..+|||+|+|.||+..|..|.+ .|.+ .++.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~~-----~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGWE-----GNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCcC-----CCEEEEECCCC
Confidence 3689999999999999998865 3641 37999998643
No 360
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=60.65 E-value=9.1 Score=40.00 Aligned_cols=37 Identities=14% Similarity=0.247 Sum_probs=28.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 283 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi 283 (496)
.||||+|||.||+..|..|.+. |- .-+|.++|+..-.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCCc
Confidence 4899999999999999988653 21 1479999987543
No 361
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=60.40 E-value=10 Score=40.25 Aligned_cols=36 Identities=28% Similarity=0.410 Sum_probs=21.7
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
++++.+++|.|||.+|-++|..|.+. |. +++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~-----G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEK-----GA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHH-----CC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 57788999999996666666666542 63 57888764
No 362
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=60.18 E-value=21 Score=32.38 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=53.7
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHH
Q 010990 234 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 311 (496)
Q Consensus 234 l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~ 311 (496)
++..+++|.|| |-.|-.+++.|++. |. ..+++++|++. .+.+.+...+..+.. +-....++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 44568999995 77777777777653 53 12688888752 111111101111111 11112456666
Q ss_pred hcccCCcEEEEccCCCCC-------------CCHHHHHHHHccCCCceEEecC
Q 010990 312 VKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 312 v~~vkptvLIG~S~~~g~-------------Ft~evv~~M~~~~~rPIIFaLS 351 (496)
++ ++|++|=+.+.... -+..++++|.+...+-||+.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 76 49999988775310 1335566665544445555433
No 363
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=60.10 E-value=7.9 Score=38.33 Aligned_cols=34 Identities=26% Similarity=0.385 Sum_probs=25.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+|+|+|||.||+..|-.|... ..|+ ++.++|+.-
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G~-------~V~v~E~~~ 35 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPLW-------AIDIVEKND 35 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTTS-------EEEEECSSC
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCCC-------CEEEEECCC
Confidence 699999999999999888652 0143 577777653
No 364
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=60.08 E-value=7.5 Score=39.66 Aligned_cols=33 Identities=27% Similarity=0.283 Sum_probs=26.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
-+|+|+|||.||+..|..+.+. |. ++.++|++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g~-------~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL-----GM-------KVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 4799999999999999887652 53 699999873
No 365
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=60.06 E-value=5.5 Score=41.19 Aligned_cols=37 Identities=22% Similarity=0.396 Sum_probs=26.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
.+|||+|+|.||+..|-.|..... .|+ ++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G~-------~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DRI-------DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GGS-------EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEEecCCC
Confidence 479999999999999999876421 243 6889988643
No 366
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=59.98 E-value=8.7 Score=39.97 Aligned_cols=38 Identities=21% Similarity=0.338 Sum_probs=29.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
...+|||+|||.||+..|..|.+. +. ..+|.++|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 356899999999999999988653 21 257999998753
No 367
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=59.86 E-value=7 Score=40.97 Aligned_cols=35 Identities=23% Similarity=0.268 Sum_probs=28.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
.+.+|||+|||.||+..|..|.+. |. ++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G~-------~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----GG-------RQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 356899999999999999988653 53 699999874
No 368
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=59.56 E-value=7.9 Score=40.49 Aligned_cols=37 Identities=30% Similarity=0.434 Sum_probs=29.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 283 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi 283 (496)
...+|+|+|||.||+..|..|.. .|+ ++.++|+..-+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~~ 127 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIKF 127 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEecccc
Confidence 35689999999999999988865 364 68899886443
No 369
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=59.53 E-value=18 Score=36.00 Aligned_cols=49 Identities=16% Similarity=0.198 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 219 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 219 ~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
+....+.+++..+.....++|+|.|||..|...+.++.. .|. +++.+|+
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~ 219 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVIST 219 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 334445677766655467899999999887776665533 353 5777765
No 370
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=59.49 E-value=12 Score=34.83 Aligned_cols=93 Identities=14% Similarity=0.178 Sum_probs=54.8
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHH
Q 010990 233 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 311 (496)
Q Consensus 233 ~l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~ 311 (496)
.++..||+|.|| |-.|-.+++.|++ .|... ..+.- + +...+- +-....++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~~---~~~~~-----~---------~~~~~~----D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVAD-----GAGLP---GEDWV-----F---------VSSKDA----DLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHT-----TTCCT---TCEEE-----E---------CCTTTC----CTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-----cCCcc---ccccc-----c---------cCceec----ccCCHHHHHHH
Confidence 356789999996 8888888887764 35300 00000 0 000000 10111357788
Q ss_pred hcccCCcEEEEccCCCCC-----------------CCHHHHHHHHccCCCceEEecC
Q 010990 312 VKVIKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 312 v~~vkptvLIG~S~~~g~-----------------Ft~evv~~M~~~~~rPIIFaLS 351 (496)
++..++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 888889999988776431 1234688887766567888544
No 371
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=59.43 E-value=76 Score=32.54 Aligned_cols=136 Identities=15% Similarity=0.174 Sum_probs=89.2
Q ss_pred HHHHHHHHHhhCCCeeeEeeeC---------CCccHHHHHHHHcCCCceee--cCCCchhHHHHHHHHHHHHHhCCC-cc
Q 010990 168 DEFMSAVKQNYGEKVLIQFEDF---------ANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGT-LA 235 (496)
Q Consensus 168 defv~av~~~fGp~~li~~EDf---------~~~~af~iL~~yr~~~~~Fn--DDiQGTa~V~LAgll~Alr~~g~~-l~ 235 (496)
.+.++ +-.+| .+++ -+-.+ ....+.+.+.+|- ++||.| ||. --+=+||=++.=.+..|.+ |+
T Consensus 116 ~DTar-vLs~y-~D~I-viR~~~~~~~~~~~~~~~~~~~lA~~~-~vPVINag~g~--HPtQaLaDl~TI~E~~g~~~l~ 189 (359)
T 1zq6_A 116 AEVAR-VLGRY-VDLI-GVRAFPKFVDWSKDREDQVLKSFAKYS-PVPVINMETIT--HPCQELAHALALQEHFGTPDLR 189 (359)
T ss_dssp HHHHH-HHHHH-CSEE-EEECCCCSSCHHHHTTCHHHHHHHHHC-SSCEEESSSSC--CHHHHHHHHHHHHHHHTSSCCT
T ss_pred HHHHH-HHHHh-CcEE-EEeccccccccccccchHHHHHHHHhC-CCCEEeCCCCC--CcHHHHHHHHHHHHHhCCCccc
Confidence 34444 44556 5543 36666 1445666666764 799999 777 6667888888888888865 99
Q ss_pred cce--EEEeCc----ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC-CcccCCCcCCCchhchhhcccc----CC
Q 010990 236 EHR--FLFLGA----GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK-GLIVSSRKDSLQHFKKPWAHEH----EP 304 (496)
Q Consensus 236 d~r--iv~~GA----G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~-GLi~~~r~~~l~~~k~~~a~~~----~~ 304 (496)
+.| |.++|- | --+|+-++.++.+ -|+ +|.++-.+ |+.-.. .+...-+.+|+.. ..
T Consensus 190 glkvvva~vGDl~~~~---nrva~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~~---~~~~~~~~~a~~~g~~v~~ 255 (359)
T 1zq6_A 190 GKKYVLTWTYHPKPLN---TAVANSALTIATR-MGM-------DVTLLCPTPDYILDE---RYMDWAAQNVAESGGSLQV 255 (359)
T ss_dssp TCEEEEEECCCSSCCC---SHHHHHHHHHHHH-TTC-------EEEEECSSGGGCCCH---HHHHHHHHHHHHHSCEEEE
T ss_pred CCeeEEEEEecccccc---cchHHHHHHHHHH-cCC-------EEEEEcCccccCCCH---HHHHHHHHHHHHcCCeEEE
Confidence 999 889998 6 3677777777766 465 68888887 773321 1111112333331 12
Q ss_pred CCCHHHHhcccCCcEEEEccC
Q 010990 305 VNNLLDAVKVIKPTILIGSSG 325 (496)
Q Consensus 305 ~~~L~e~v~~vkptvLIG~S~ 325 (496)
..++.|++++ +||+.-..=
T Consensus 256 ~~d~~eav~~--aDvVyt~~w 274 (359)
T 1zq6_A 256 SHDIDSAYAG--ADVVYAKSW 274 (359)
T ss_dssp ECCHHHHHTT--CSEEEEECC
T ss_pred ECCHHHHhcC--CCEEEECCc
Confidence 3689999998 999987653
No 372
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=59.37 E-value=7.6 Score=39.83 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=27.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+.+|+|+|||.||+..|..+.+. |. ++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-----GF-------KTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCC
Confidence 45899999999999999888652 53 699999874
No 373
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=59.32 E-value=11 Score=39.96 Aligned_cols=39 Identities=15% Similarity=0.325 Sum_probs=30.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 283 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi 283 (496)
...+|||+|||.||+..|..|.+. ..| -+|.++|+..-+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRL---SEE-------DEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhh---CcC-------CCEEEEECCCCc
Confidence 357999999999999999988654 012 479999987543
No 374
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=59.32 E-value=13 Score=34.93 Aligned_cols=97 Identities=11% Similarity=0.025 Sum_probs=56.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 010990 238 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 315 (496)
Q Consensus 238 riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~v 315 (496)
||+|.|| |-.|-.+++.|.+. .| .++..++++.- +...+.+....+.+ +-....+|.+++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~~----~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNVE----KVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSGG----GSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCHH----HHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 88888888875431 14 35777766421 10111111111111 11122467788875
Q ss_pred CCcEEEEccCCCCC------CCHHHHHHHHccCCCceEEecC
Q 010990 316 KPTILIGSSGVGRT------FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 316 kptvLIG~S~~~g~------Ft~evv~~M~~~~~rPIIFaLS 351 (496)
.|++|=+++.... -++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 8999988765421 2467888888766667887544
No 375
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=59.22 E-value=6.6 Score=40.55 Aligned_cols=64 Identities=13% Similarity=0.154 Sum_probs=28.9
Q ss_pred cCCCchhHHHHHHHHHHHHH---hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 010990 210 DDIQGTASVVLAGVVAALKL---IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 283 (496)
Q Consensus 210 DDiQGTa~V~LAgll~Alr~---~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi 283 (496)
...||-|+.+.---+.-... ...+....+|||+|||.||+..|..|.+.. .| .++.++|++...
T Consensus 7 ~~~~~~~~~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 7 HHHHGMASMTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp ------------------------------CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred ccccccccccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 34566666655443332211 111222358999999999999999886531 13 479999987543
No 376
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=59.15 E-value=12 Score=34.24 Aligned_cols=101 Identities=20% Similarity=0.153 Sum_probs=54.3
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHH
Q 010990 234 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 311 (496)
Q Consensus 234 l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~ 311 (496)
..-.+|+|.|| |-.|-.+++.|++ .|- -++.+++++. .+...+......+.+ +-....++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 34468999995 7777777777653 241 2677777652 110111111111111 11122457778
Q ss_pred hcccCCcEEEEccCCCCC--CCHHHHHHHHccCCCceEEecC
Q 010990 312 VKVIKPTILIGSSGVGRT--FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 312 v~~vkptvLIG~S~~~g~--Ft~evv~~M~~~~~rPIIFaLS 351 (496)
++. .|++|=+.+.... -++.+++.|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 875 7999966554322 2566788887654445666443
No 377
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=58.75 E-value=8.3 Score=35.83 Aligned_cols=37 Identities=24% Similarity=0.267 Sum_probs=26.6
Q ss_pred CCcccceEEEeCcC---hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 232 GTLAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 232 ~~l~d~riv~~GAG---~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.++++.++||.||+ ..|.++|+.|++ +|. +++++|++
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G~-------~V~~~~r~ 49 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKR-----EGA-------ELAFTYVG 49 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cCC-------CEEEEecc
Confidence 46889999999984 455566666654 363 68888875
No 378
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=58.64 E-value=7.3 Score=40.62 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=27.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+..|+|+|||.+|+..|-.|.+ .|+ ++.++|+.-
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 5689999999999999988864 365 588888764
No 379
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=58.61 E-value=6.4 Score=41.84 Aligned_cols=36 Identities=14% Similarity=0.085 Sum_probs=28.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
.+.+|||+|||.||+..|..|.. +.|. ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 35689999999999999988862 1364 699999864
No 380
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=58.59 E-value=7.1 Score=36.81 Aligned_cols=31 Identities=16% Similarity=0.251 Sum_probs=24.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.|+|+|+|+||+..|..+.+ .|. ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 69999999999998877654 364 57888874
No 381
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=58.56 E-value=18 Score=36.02 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=24.6
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
-..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 357799999999877666555432 265 57888875
No 382
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=58.54 E-value=6.7 Score=40.15 Aligned_cols=33 Identities=21% Similarity=0.434 Sum_probs=27.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.+|+|+|||.||+..|..+.+ .| .++.++|++
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4589999999999999988864 25 479999986
No 383
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=58.44 E-value=15 Score=36.13 Aligned_cols=103 Identities=14% Similarity=0.156 Sum_probs=57.0
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCc-hhchhhcc-ccCCCCCHH
Q 010990 233 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 309 (496)
Q Consensus 233 ~l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~-~~k~~~a~-~~~~~~~L~ 309 (496)
+++..+|+|.|| |-.|-.+++.|++ .|. .+++.+|+..- ...+.+. ..+..+.. +-....++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~~---~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLE-----LGV------NQVHVVDNLLS---AEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHH-----TTC------SEEEEECCCTT---CCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHH-----cCC------ceEEEEECCCC---CchhhccCCCceEEEECCCCCHHHHH
Confidence 356679999997 8788888877764 251 36888877421 1001111 00111111 111112455
Q ss_pred HHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHcc-CCCceEEecC
Q 010990 310 DAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASF-NEKPLILALS 351 (496)
Q Consensus 310 e~v~~vkptvLIG~S~~~g~----------------Ft~evv~~M~~~-~~rPIIFaLS 351 (496)
++++ ++|++|=+.+.... -+..+++++.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 6666 59999988775421 144567777655 4456887544
No 384
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=58.42 E-value=8.2 Score=39.46 Aligned_cols=30 Identities=23% Similarity=0.503 Sum_probs=24.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
||.|+|+|..|..+|..|.. | -+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999888742 3 368888874
No 385
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=58.30 E-value=8.1 Score=40.41 Aligned_cols=36 Identities=19% Similarity=0.375 Sum_probs=27.9
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.-++..|+|+|||.+|+..|-.|.. .|+ ++.++|++
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 43 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERL 43 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 3456789999999999999988865 365 46677764
No 386
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=58.29 E-value=10 Score=39.41 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=26.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 278 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD 278 (496)
+.+|+|+|||.||+..|..+.+. .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999998761 15 3699999
No 387
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=58.21 E-value=23 Score=34.40 Aligned_cols=55 Identities=20% Similarity=0.273 Sum_probs=32.5
Q ss_pred CchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 213 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 213 QGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
++...-.+++.+.+.+..+. -..++++|.|||..|...+.++ .+ .|. +.+..+|+
T Consensus 139 ~aa~l~~~~~~~~~~~~~~~-~~g~~VlV~GaG~vG~~aiq~a-k~----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 139 DGAFIEPITVGLHAFHLAQG-CENKNVIIIGAGTIGLLAIQCA-VA----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGHHHHHHHHHHHHHTTC-CTTSEEEEECCSHHHHHHHHHH-HH----TTC------SEEEEEES
T ss_pred HHHhchHHHHHHHHHHHhcc-CCCCEEEEECCCCcchHHHHHH-HH----cCC------cEEEEEec
Confidence 44443344444555555544 4577999999998875544333 32 365 56676665
No 388
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=58.18 E-value=17 Score=34.56 Aligned_cols=98 Identities=13% Similarity=0.171 Sum_probs=55.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 010990 238 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 315 (496)
Q Consensus 238 riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~v 315 (496)
+|+|.|| |-.|-.+++.|++ .|. +++.+|+.- ....+.+.. ...+.. +-....++.++++..
T Consensus 3 ~ilVtGatG~iG~~l~~~L~~-----~g~-------~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~ 66 (330)
T 2c20_A 3 SILICGGAGYIGSHAVKKLVD-----EGL-------SVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQE 66 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHHS
T ss_pred EEEEECCCcHHHHHHHHHHHh-----CCC-------EEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhhc
Confidence 7899986 7778777777764 253 578777631 110011211 111111 111123567777755
Q ss_pred CCcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010990 316 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 316 kptvLIG~S~~~g~----------------Ft~evv~~M~~~~~rPIIFaLS 351 (496)
++|++|=+.+.... -+..+++++.+..-+.+||.=|
T Consensus 67 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 67 NIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp CEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 79999988775421 1345677776655567887544
No 389
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=58.06 E-value=7.4 Score=39.70 Aligned_cols=32 Identities=28% Similarity=0.299 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LGQ-------KVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 479999999999999988764 253 69999986
No 390
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=58.04 E-value=9.6 Score=38.75 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=19.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHH
Q 010990 236 EHRFLFLGAGEAGTGIAELIALE 258 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~ 258 (496)
+.-|+|+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 45799999999999999988653
No 391
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=57.87 E-value=9.3 Score=39.22 Aligned_cols=34 Identities=32% Similarity=0.400 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+-.|+|+|||.||+..|..+.+ .|. ++.++|+++
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G~-------~V~liEk~~ 37 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AKY-------NVLMADPKG 37 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECTTS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECCC
Confidence 3579999999999999988864 354 699999654
No 392
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=57.78 E-value=6.4 Score=39.54 Aligned_cols=153 Identities=15% Similarity=0.154 Sum_probs=77.4
Q ss_pred CCcceecccccchHHHHhhcCCCCCceEEEEecCcccccCCCCCCccccchhhhHHHHhhhcCCCCCceeeEEeecCCCc
Q 010990 62 PQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNN 141 (496)
Q Consensus 62 p~glyis~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~~gm~I~~GKl~Ly~~~gGi~P~~~lPi~LDvgTnn 141 (496)
|||..++--|-++. .-.+..++++|||.++=| +--+-+ -=||. .+|+.+-+| .
T Consensus 16 ~~~~~~~~~~~~~~------~~~~~Mki~IvTDSt~dL----------~~e~~~------~~~I~---vvPL~v~~~--~ 68 (315)
T 3fys_A 16 PRGSHMASMTGGQQ------MGRGSMNIAVVTDSTAYI----------PKEMRE------QHQIH---MIPLQVVFR--E 68 (315)
T ss_dssp ------------------------CCCEEEEEEGGGCC----------CHHHHH------HHTEE---EECCEEECS--S
T ss_pred cCccccccccchhh------hCcCCCcEEEEEECCCCC----------CHHHHH------hCCeE---EEeEEEEEC--C
Confidence 56655544443332 222235899999998633 111111 12577 889888876 3
Q ss_pred hhcccCcccccccccCCChhhhHHHHHHHHHHHHH--hhCCCeeeEeeeCCCccHHHHHHHHc---C---CCceeecCCC
Q 010990 142 EQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQ--NYGEKVLIQFEDFANHNAFELLAKYG---T---THLVFNDDIQ 213 (496)
Q Consensus 142 ~~Ll~DplYlG~r~~R~~g~~y~~~vdefv~av~~--~fGp~~li~~EDf~~~~af~iL~~yr---~---~~~~FnDDiQ 213 (496)
++.+++ .+.+ .+||.+.++. .. | ==+.|+--++++.|+ + ++-+++=-
T Consensus 69 ~~Y~D~-------------~di~--~~efy~~m~~~~~~-p-------~TSqPs~~~~~~~fe~l~~~~~~Ii~I~iS-- 123 (315)
T 3fys_A 69 ETYREE-------------IELD--WKSFYEEVKKHNEL-P-------TTSQPPIGELVALYEELGKSYDAVISIHLS-- 123 (315)
T ss_dssp CEEEBT-------------TTBC--HHHHHHHHHTTTCC-C-------EEECCCHHHHHHHHHHHTTTCSEEEEEESC--
T ss_pred EEEECC-------------CCCC--HHHHHHHHHhCCCC-c-------ccCCCCHHHHHHHHHHHHhcCCcEEEEeCC--
Confidence 333222 1111 3667666664 22 2 124455555555443 2 23333321
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHH-HHhcCC-Chhhh
Q 010990 214 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEI-SKQTKA-PVEET 270 (496)
Q Consensus 214 GTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~-~~~~G~-~~eeA 270 (496)
-.|+|-.++.+.....+.+.+|-++=..+++.|..-++..+. ..++|. |.+|.
T Consensus 124 ----S~LSGTy~sA~~Aa~~~~~~~I~ViDS~~~s~g~g~lv~~Aa~l~~~G~~s~eeI 178 (315)
T 3fys_A 124 ----SGISGTFSSAAAADSMVDNIDVYPFDSEISCLAQGFYALKAAELIKNGASSPEDI 178 (315)
T ss_dssp ----TTTCSHHHHHHHGGGGCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred ----CcHhHHHHHHHHHHHhCCCCCEEEECCchhHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 223444555565556677789999999988888888777653 234699 88874
No 393
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=57.76 E-value=9.6 Score=38.19 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=27.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
..|+|+|||.+|+.+|..|.+.. -| .++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCCC
Confidence 58999999999999999886520 04 3699999863
No 394
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=57.58 E-value=8.5 Score=39.43 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ-----LGF-------NTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCC
Confidence 3579999999999999998865 253 699999853
No 395
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=57.55 E-value=8.6 Score=39.80 Aligned_cols=37 Identities=19% Similarity=0.352 Sum_probs=29.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+.+|||+|||.||+..|..|.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 46899999999999999998764 20 114799999864
No 396
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=57.54 E-value=17 Score=34.38 Aligned_cols=98 Identities=16% Similarity=0.297 Sum_probs=53.9
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 010990 238 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 315 (496)
Q Consensus 238 riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~v 315 (496)
||+|.|| |-.|-.+++.|++ .|. +++.+|+.- ......+.. ...+.+ +-....++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G~-------~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RGL-------EVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TTC-------EEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CCC-------EEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6899987 7777777777654 353 577777621 111011110 111111 111113566777766
Q ss_pred CCcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010990 316 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 316 kptvLIG~S~~~g~----------------Ft~evv~~M~~~~~rPIIFaLS 351 (496)
++|++|=+.+..+. -+..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 79999988775431 0235667776655567887544
No 397
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=57.46 E-value=8 Score=40.24 Aligned_cols=33 Identities=24% Similarity=0.427 Sum_probs=27.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
.+|||+|||.||+..|..+.+. | .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARH-----N-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 5799999999999999988652 5 3699999873
No 398
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=57.36 E-value=7 Score=40.73 Aligned_cols=35 Identities=17% Similarity=0.515 Sum_probs=28.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
.+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 34689999999999999987754 364 688999875
No 399
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=57.35 E-value=18 Score=35.59 Aligned_cols=56 Identities=13% Similarity=0.170 Sum_probs=35.4
Q ss_pred chhHHHHHHHHHHHHHhCCCccc--ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 214 GTASVVLAGVVAALKLIGGTLAE--HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 214 GTa~V~LAgll~Alr~~g~~l~d--~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
++-...++..+.|+.-.+.--.. ++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 34344555666677333332345 79999998 8888777766543 364 478888763
No 400
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=57.23 E-value=8.2 Score=38.32 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=26.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.+|||+|||.||+..|..|.+ .|. .-++.++|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 3579999999999999988854 354 1368888765
No 401
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=57.19 E-value=8.7 Score=39.41 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.+|||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 35799999999999999887653 5 379999984
No 402
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=57.13 E-value=12 Score=35.45 Aligned_cols=87 Identities=13% Similarity=0.137 Sum_probs=53.9
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcc
Q 010990 236 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 314 (496)
Q Consensus 236 d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~ 314 (496)
..||+|.|| |-.|-.+++.|++ .|. +++.+++. ... ++.+ ..++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~-D~~d-----------~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DEL-NLLD-----------SRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTC-CTTC-----------HHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccC-CccC-----------HHHHHHHHHh
Confidence 468999996 7788777777753 243 46666543 011 1211 1346677776
Q ss_pred cCCcEEEEccCCCCC-----------------CCHHHHHHHHccCCCceEEecC
Q 010990 315 IKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 315 vkptvLIG~S~~~g~-----------------Ft~evv~~M~~~~~rPIIFaLS 351 (496)
.++|++|=+.+..+. -+..+++++.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 679999988876531 1345677776655567887654
No 403
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=57.06 E-value=37 Score=33.26 Aligned_cols=76 Identities=14% Similarity=0.201 Sum_probs=43.3
Q ss_pred HHHHHhCCCcccceEEEe-CcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc--
Q 010990 225 AALKLIGGTLAEHRFLFL-GAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-- 301 (496)
Q Consensus 225 ~Alr~~g~~l~d~riv~~-GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-- 301 (496)
++++..+ ...++++||. |+|..|...+.++... |. +++.+|+. . .+..++++
T Consensus 155 ~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~-----Ga-------~Vi~~~~~----~--------~~~~~~~~~G 209 (349)
T 3pi7_A 155 AMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEE-----GF-------RPIVTVRR----D--------EQIALLKDIG 209 (349)
T ss_dssp HHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHH-----TC-------EEEEEESC----G--------GGHHHHHHHT
T ss_pred HHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHC-----CC-------EEEEEeCC----H--------HHHHHHHHcC
Confidence 6666655 4455788877 7788887776655432 63 58877752 1 12222221
Q ss_pred -----cCCCCCHHHHhcc----cCCcEEEEccC
Q 010990 302 -----HEPVNNLLDAVKV----IKPTILIGSSG 325 (496)
Q Consensus 302 -----~~~~~~L~e~v~~----vkptvLIG~S~ 325 (496)
.....++.+.++. -+.|++|=+++
T Consensus 210 a~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g 242 (349)
T 3pi7_A 210 AAHVLNEKAPDFEATLREVMKAEQPRIFLDAVT 242 (349)
T ss_dssp CSEEEETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred CCEEEECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence 0112345555543 36899987766
No 404
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=56.91 E-value=9.8 Score=39.26 Aligned_cols=33 Identities=15% Similarity=0.405 Sum_probs=27.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+..|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~-----G~-------~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL-----GK-------RVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----cC-------EEEEEeCC
Confidence 45899999999999999888653 53 69999984
No 405
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=56.46 E-value=25 Score=34.16 Aligned_cols=48 Identities=21% Similarity=0.157 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 220 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 220 LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
....+.+++..+.+ ..++++|+|||+.|.-.+.++..+ .| .+++.+|+
T Consensus 149 ~~ta~~~l~~~~~~-~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 149 GVTTYKAIKVSGVK-PGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeeEEeeecccCCC-CCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 34456777777654 467999999999885544444322 23 46887776
No 406
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=56.32 E-value=8.8 Score=39.80 Aligned_cols=25 Identities=28% Similarity=0.436 Sum_probs=21.3
Q ss_pred cccceEEEeCcChHHHHHHHHHHHH
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALE 258 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~ 258 (496)
..+.+|+|+|||.||+..|..|.+.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc
Confidence 3456899999999999999998763
No 407
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=55.88 E-value=7 Score=37.79 Aligned_cols=34 Identities=21% Similarity=0.508 Sum_probs=27.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+...|+|+|||.+|+.+|-.|. . |. ++.++|+..
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~-----G~-------~V~vlE~~~ 41 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-A-----HG-------RVVVLEREA 41 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-T-----TS-------CEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-C-----CC-------CEEEEECCC
Confidence 3568999999999999998885 1 53 699999874
No 408
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=55.83 E-value=83 Score=31.54 Aligned_cols=130 Identities=22% Similarity=0.283 Sum_probs=85.0
Q ss_pred HHHhhCCCeeeEeeeCCCccHHHHHHHHcCCCceeecC-CCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHH
Q 010990 174 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDD-IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIA 252 (496)
Q Consensus 174 v~~~fGp~~li~~EDf~~~~af~iL~~yr~~~~~FnDD-iQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA 252 (496)
+-.+| .++ |-+-.++ +.+.+.+.+|- ++||.|-. -+---+=+||=++.=.+..| +|++.||+++|-| --+|
T Consensus 97 vls~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINa~~~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~---~rva 168 (315)
T 1pvv_A 97 VLSRY-VDA-IMARVYD-HKDVEDLAKYA-TVPVINGLSDFSHPCQALADYMTIWEKKG-TIKGVKVVYVGDG---NNVA 168 (315)
T ss_dssp HHTTT-CSE-EEEECSS-HHHHHHHHHHC-SSCEEEEECSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC---CHHH
T ss_pred HHHHh-CcE-EEEecCc-hHHHHHHHHhC-CCCEEcCCCCCCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCC---cchH
Confidence 55567 454 4466664 44455566664 68999831 14455678888887777765 6999999999998 2678
Q ss_pred HHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc----CCCCCHHHHhcccCCcEEEEcc
Q 010990 253 ELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSS 324 (496)
Q Consensus 253 ~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~----~~~~~L~e~v~~vkptvLIG~S 324 (496)
+-++.++.+ -|+ ++.++-.+|+.-.. + +-+.-+.+|+.. ....++.|++++ +||+.-..
T Consensus 169 ~Sl~~~~~~-~g~-------~v~~~~P~~~~~~~--~-~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDvvy~~~ 231 (315)
T 1pvv_A 169 HSLMIAGTK-LGA-------DVVVATPEGYEPDE--K-VIKWAEQNAAESGGSFELLHDPVKAVKD--ADVIYTDV 231 (315)
T ss_dssp HHHHHHHHH-TTC-------EEEEECCTTCCCCH--H-HHHHHHHHHHHHTCEEEEESCHHHHTTT--CSEEEECC
T ss_pred HHHHHHHHH-CCC-------EEEEECCccccCCH--H-HHHHHHHHHHHcCCeEEEEeCHHHHhCC--CCEEEEcc
Confidence 888888776 475 68988888773321 0 111112333321 123789999998 99998754
No 409
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=55.80 E-value=11 Score=38.47 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=28.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
.+|||+|+|.||+..|..|.+. ..| .++.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK---YPQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhh---CcC-------CcEEEEECCCC
Confidence 4899999999999999998763 012 47999998753
No 410
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=55.79 E-value=4.8 Score=38.13 Aligned_cols=99 Identities=10% Similarity=0.071 Sum_probs=57.0
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCc--CCCchhchhhcc-ccCCCCCHHHH
Q 010990 236 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK--DSLQHFKKPWAH-EHEPVNNLLDA 311 (496)
Q Consensus 236 d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~--~~l~~~k~~~a~-~~~~~~~L~e~ 311 (496)
..+|+|.|| |.-|-.+++.|++. |- -++..++++. .+. ..+......+.+ +-....++.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g~------~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----GT------FKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----CS------SEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----CC------ceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 88888888888653 41 3577777641 110 000000001111 11112467788
Q ss_pred hcccCCcEEEEccCCCCC--------CCHHHHHHHHccCCCceEEecCC
Q 010990 312 VKVIKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALSN 352 (496)
Q Consensus 312 v~~vkptvLIG~S~~~g~--------Ft~evv~~M~~~~~rPIIFaLSN 352 (496)
+++ +|++|-+++.... .++.++++|.+..-+-||+ .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 876 8999987653211 2456788887665567888 664
No 411
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=55.75 E-value=29 Score=34.37 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=23.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.++|+|.|||..|..++.++.. .|. +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT-----YGL-------EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH-----HTC-------EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 7899999998777766665543 252 68888764
No 412
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=55.74 E-value=11 Score=38.68 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=28.5
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
-...+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-----G~-------~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-----GH-------DVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-----SC-------EEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 3467999999999999999988653 53 68888876
No 413
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=55.57 E-value=14 Score=34.06 Aligned_cols=22 Identities=18% Similarity=0.389 Sum_probs=18.9
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHH
Q 010990 316 KPTILIGSSGVGRTFTKEVIEAMA 339 (496)
Q Consensus 316 kptvLIG~S~~~g~Ft~evv~~M~ 339 (496)
+=|++|++|..|. |+++++.+.
T Consensus 114 ~~Dvvi~iS~SG~--t~~~~~~~~ 135 (201)
T 3trj_A 114 EDDILLVITTSGD--SENILSAVE 135 (201)
T ss_dssp TTCEEEEECSSSC--CHHHHHHHH
T ss_pred CCCEEEEEeCCCC--CHHHHHHHH
Confidence 4799999999875 999999884
No 414
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=55.56 E-value=9 Score=40.46 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=26.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+..|+|+|||.+|+..|-.|.. .|+ ++.++|+.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~-----~G~-------~V~vlEr~ 58 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAH-----RQV-------GHLVVEQT 58 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 4589999999999999988865 375 47888875
No 415
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=55.48 E-value=9.7 Score=36.91 Aligned_cols=36 Identities=25% Similarity=0.264 Sum_probs=26.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhh-cCcEEEEcCC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEET-RKKICLVDSK 280 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA-~~~i~~vD~~ 280 (496)
.|+|+|||.+|+.+|-.|.+. |.+. . ..++.++|+.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-----G~~~--~p~~~V~vlE~~ 38 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-----YHSV--LQPLDIKVYADR 38 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----HTTT--SSSCEEEEEESS
T ss_pred cEEEECCCHHHHHHHHHHHHh-----cccc--CCCceEEEEECC
Confidence 689999999999999888653 3100 0 1479999987
No 416
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=55.48 E-value=31 Score=36.13 Aligned_cols=105 Identities=21% Similarity=0.276 Sum_probs=58.0
Q ss_pred cceEEEeCcChHHH-HHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCC--CCCHHHHh
Q 010990 236 EHRFLFLGAGEAGT-GIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAV 312 (496)
Q Consensus 236 d~riv~~GAG~Ag~-GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~--~~~L~e~v 312 (496)
-+||.|+|.|-+|+ |+|++|.+ .|. ++...|.+ .. +....+.+..-. .+.-.+.+
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~-----~G~-------~V~~~D~~----~~------~~~~~l~~~gi~~~~g~~~~~~ 79 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLAN-----EGY-------QISGSDLA----PN------SVTQHLTALGAQIYFHHRPENV 79 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHH-----TTC-------EEEEECSS----CC------HHHHHHHHTTCEEESSCCGGGG
T ss_pred CCEEEEEEEcHhhHHHHHHHHHh-----CCC-------eEEEEECC----CC------HHHHHHHHCCCEEECCCCHHHc
Confidence 36999999999999 48988865 364 68888864 11 111112111000 01111223
Q ss_pred cccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccCC-cEEEecCC
Q 010990 313 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKG-RAIFASGS 378 (496)
Q Consensus 313 ~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIFaLSNPt~~~E~~peda~~~t~G-~ai~AsGs 378 (496)
. .+|++|=-++.+ .=++++.++..+ .-|||= | +|-++.+.++ +.|-.|||
T Consensus 80 ~--~~d~vV~Spgi~-~~~p~~~~a~~~--gi~v~~---------~--~e~l~~~~~~~~~IaVTGT 130 (494)
T 4hv4_A 80 L--DASVVVVSTAIS-ADNPEIVAAREA--RIPVIR---------R--AEMLAELMRYRHGIAVAGT 130 (494)
T ss_dssp T--TCSEEEECTTSC-TTCHHHHHHHHT--TCCEEE---------H--HHHHHHHHTTSEEEEEECS
T ss_pred C--CCCEEEECCCCC-CCCHHHHHHHHC--CCCEEc---------H--HHHHHHHhcCCCEEEEecC
Confidence 3 388888444444 347777777653 346652 1 2333334444 46777886
No 417
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=55.42 E-value=11 Score=38.62 Aligned_cols=33 Identities=24% Similarity=0.247 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+-.++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 34799999999999999988753 5 369999986
No 418
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=55.40 E-value=27 Score=32.43 Aligned_cols=78 Identities=13% Similarity=0.198 Sum_probs=40.8
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHH
Q 010990 231 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 310 (496)
Q Consensus 231 g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e 310 (496)
..++++.+++|.||+. ||...++..+.+ +|. +++++|++- .+ +.... .+.-+-....++.+
T Consensus 10 ~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~~----~~---~~~~~-~~~~D~~~~~~~~~ 70 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNR---GIGLAIAQRLAA-DGH-------KVAVTHRGS----GA---PKGLF-GVEVDVTDSDAVDR 70 (247)
T ss_dssp CCCCCCCEEEETTTTS---HHHHHHHHHHHH-TTC-------EEEEEESSS----CC---CTTSE-EEECCTTCHHHHHH
T ss_pred cccCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCh----HH---HHHhc-CeeccCCCHHHHHH
Confidence 3457888999999743 333344444443 363 588887741 11 21111 11111111123445
Q ss_pred Hhccc-----CCcEEEEccCCC
Q 010990 311 AVKVI-----KPTILIGSSGVG 327 (496)
Q Consensus 311 ~v~~v-----kptvLIG~S~~~ 327 (496)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 71 AFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 55543 689999877654
No 419
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=55.27 E-value=1.1e+02 Score=30.63 Aligned_cols=136 Identities=16% Similarity=0.163 Sum_probs=86.7
Q ss_pred HHHHHHHHHhhCCCeeeEeeeCCCccHHHHHHHHcCCCceeec-C-CCchhHHHHHHHHHHHHHhCCCcccceEEEeCcC
Q 010990 168 DEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFND-D-IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAG 245 (496)
Q Consensus 168 defv~av~~~fGp~~li~~EDf~~~~af~iL~~yr~~~~~FnD-D-iQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG 245 (496)
...++ +-.+|+ ++ |-+-.++.. +.+.+.+| .++||.|- | .+---+=+||=++.=.+..| ++++.||+++|-|
T Consensus 87 ~DTar-vls~~~-D~-iviR~~~~~-~~~~lA~~-~~vPVINag~g~~~HPtQ~LaDl~Ti~e~~g-~l~glkva~vGD~ 160 (306)
T 4ekn_B 87 IDTIR-VISGYA-DI-IVLRHPSEG-AARLASEY-SQVPIINAGDGSNQHPTQTLLDLYTIMREIG-RIDGIKIAFVGDL 160 (306)
T ss_dssp HHHHH-HHHHHC-SE-EEEECSSTT-HHHHHHHH-CSSCEEESCSSSSCCHHHHHHHHHHHHHHHS-CSTTCEEEEESCT
T ss_pred HHHHH-HHHHhC-cE-EEEEcCChH-HHHHHHHh-CCCCEEeCCCCCCcCcHHHHHHHHHHHHHhC-CcCCCEEEEEcCC
Confidence 34444 445673 43 447777654 44556666 47999994 3 45555667888777666666 6999999999987
Q ss_pred hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc----CCCCCHHHHhcccCCcEEE
Q 010990 246 EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILI 321 (496)
Q Consensus 246 ~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~----~~~~~L~e~v~~vkptvLI 321 (496)
.=| -+|+-++.++.+-.|+ ++.++-.+|+- +++.-...++.. ....++.|+|++ +||+.
T Consensus 161 ~~~-rva~Sl~~~~~~~~G~-------~v~~~~P~~~~-------~~~~~~~~~~~~g~~~~~~~d~~eav~~--aDvvy 223 (306)
T 4ekn_B 161 KYG-RTVHSLVYALSLFENV-------EMYFVSPKELR-------LPKDIIEDLKAKNIKFYEKESLDDLDDD--IDVLY 223 (306)
T ss_dssp TTC-HHHHHHHHHHHTSSSC-------EEEEECCGGGC-------CCHHHHHHHHHTTCCEEEESCGGGCCTT--CSEEE
T ss_pred CCC-cHHHHHHHHHHhcCCC-------EEEEECCcccc-------cCHHHHHHHHHcCCEEEEEcCHHHHhcC--CCEEE
Confidence 522 3777777776652265 58888777762 222222333321 113689999998 99999
Q ss_pred EccCC
Q 010990 322 GSSGV 326 (496)
Q Consensus 322 G~S~~ 326 (496)
-..-|
T Consensus 224 ~~~~q 228 (306)
T 4ekn_B 224 VTRIQ 228 (306)
T ss_dssp ECCCC
T ss_pred eCCcc
Confidence 66443
No 420
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=55.23 E-value=25 Score=33.46 Aligned_cols=97 Identities=20% Similarity=0.137 Sum_probs=53.1
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 010990 237 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 314 (496)
Q Consensus 237 ~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~ 314 (496)
.||+|.|| |-.|-.+++.|++ .| -+++.+|++. ...+.+...+..+.+ +-....++.++++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALRG 77 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHcC
Confidence 38999996 8888888887765 25 3688887742 111111111111111 11112357777775
Q ss_pred cCCcEEEEccCCCCCC--------------CHHHHHHHHccCCCceEEecC
Q 010990 315 IKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 315 vkptvLIG~S~~~g~F--------------t~evv~~M~~~~~rPIIFaLS 351 (496)
+|++|=+.+..+.. +..+++++.+..-+.+||.=|
T Consensus 78 --~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 78 --LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp --CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred --CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 99999887754311 346777777665567887544
No 421
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=55.23 E-value=8.2 Score=40.34 Aligned_cols=39 Identities=31% Similarity=0.397 Sum_probs=29.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHH-------hcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISK-------QTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~-------~~G~~~eeA~~~i~~vD~~G 281 (496)
..+|||+|||.||...|-.|...+-. ..|+ ++.++++.-
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCC
Confidence 46899999999999999998764310 0254 688999864
No 422
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=55.22 E-value=8.5 Score=39.12 Aligned_cols=35 Identities=23% Similarity=0.240 Sum_probs=28.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~-----~G~-------~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAK-----LGK-------SVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 4579999999999999988865 364 6999998653
No 423
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=55.01 E-value=15 Score=37.29 Aligned_cols=36 Identities=19% Similarity=0.298 Sum_probs=28.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
..+|+|+|||.+|+..|..|.+. |- ..++.++++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCC
Confidence 46899999999999999998764 51 13688888753
No 424
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=54.95 E-value=10 Score=39.03 Aligned_cols=34 Identities=26% Similarity=0.295 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+.+|+|+|||.||+..|..+.+ .|. ++.++|++.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 4589999999999999987754 354 599999853
No 425
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=54.79 E-value=10 Score=36.09 Aligned_cols=34 Identities=26% Similarity=0.412 Sum_probs=24.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.--++|+|||+||+..|-.+.+ .| .++.++|+.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar-----~g-------~~v~lie~~ 38 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGR-----AR-------KQIALFDNN 38 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECS
T ss_pred CCcCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeCC
Confidence 33468999999999988755543 25 368899875
No 426
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=54.72 E-value=14 Score=33.53 Aligned_cols=68 Identities=15% Similarity=0.198 Sum_probs=38.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc-
Q 010990 238 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 315 (496)
Q Consensus 238 riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v- 315 (496)
+++|.|| |-.|..+++.|++ .|. +++++|++. . .+.. .+.-+-....++.++++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g~-------~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AGH-------TVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CCC-------EEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6899987 5566666666654 353 588888741 1 1111 1111111113455666644
Q ss_pred -CCcEEEEccCCC
Q 010990 316 -KPTILIGSSGVG 327 (496)
Q Consensus 316 -kptvLIG~S~~~ 327 (496)
++|++|=+.+..
T Consensus 61 ~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 61 GVLDGLVCCAGVG 73 (255)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCccEEEECCCCC
Confidence 799999887754
No 427
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=54.46 E-value=10 Score=38.78 Aligned_cols=34 Identities=24% Similarity=0.238 Sum_probs=27.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
..|+|+|||.||+..|-.+.+ .|. ++.++|+...
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~-----~G~-------~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE-----EGA-------NVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------CEEEEECCCC
Confidence 579999999999999988764 353 6999998653
No 428
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=54.39 E-value=11 Score=39.04 Aligned_cols=34 Identities=15% Similarity=0.382 Sum_probs=26.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
..+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-----G~-------~V~vlE~~~ 37 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-----GL-------NVVVLEARD 37 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 35799999999999999998753 53 577777653
No 429
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=54.38 E-value=11 Score=38.46 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=25.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA-----GF-------KTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 5899999999999999988653 53 57777765
No 430
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=54.19 E-value=11 Score=41.52 Aligned_cols=34 Identities=24% Similarity=0.432 Sum_probs=28.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
..+|||+|||.||+..|..|.. .|. ++.++|+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~-----~G~-------~Vtlie~~~ 422 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLME-----SGY-------TVHLTDTAE 422 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4689999999999999998865 253 599999863
No 431
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=54.13 E-value=11 Score=40.29 Aligned_cols=34 Identities=29% Similarity=0.483 Sum_probs=28.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+..|+|+|+|.+|+++|..|.. .|+ ++.++|+..
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 4579999999999999998865 365 589999764
No 432
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=54.08 E-value=8.3 Score=35.89 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=53.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 010990 238 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 315 (496)
Q Consensus 238 riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~v 315 (496)
||+|.|| |-.|-.+++.|++. ..| -+++.++++. .+.+.+......+.+ +-....++.+++++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5889997 87787777776531 003 3588787641 110001000111111 11112357777775
Q ss_pred CCcEEEEccCCCC----CCCHHHHHHHHccCCCceEEecC
Q 010990 316 KPTILIGSSGVGR----TFTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 316 kptvLIG~S~~~g----~Ft~evv~~M~~~~~rPIIFaLS 351 (496)
+|++|=+++... ..+..++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998776421 23678889987766567887544
No 433
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=53.86 E-value=6.1 Score=40.32 Aligned_cols=35 Identities=37% Similarity=0.427 Sum_probs=27.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
+.+|+|+|||.||+..|..|.. .|+ ++.++|++-.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCCC
Confidence 3579999999999999988754 364 5888887643
No 434
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=53.83 E-value=11 Score=36.04 Aligned_cols=37 Identities=24% Similarity=0.370 Sum_probs=28.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
.+..|+|+|||.||+..|..+.+. .| .++.++|+..-
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~----~G-------~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN----PN-------VQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS----TT-------SCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHc----CC-------CeEEEEECCCC
Confidence 346899999999999999887531 14 36889988643
No 435
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=53.81 E-value=13 Score=38.47 Aligned_cols=105 Identities=14% Similarity=0.089 Sum_probs=60.8
Q ss_pred cceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc--CC-------CcccCCCcCCCchhchhhccccCCC
Q 010990 236 EHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVD--SK-------GLIVSSRKDSLQHFKKPWAHEHEPV 305 (496)
Q Consensus 236 d~riv~~G-AG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD--~~-------GLi~~~r~~~l~~~k~~~a~~~~~~ 305 (496)
..||.|.| ||..|..+|-+|+. .++--|+ ..+.++| .. |... +|++-..+|.+...-.
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~-----~~l~~e~--~~l~L~d~d~~~~~~~~~G~am-----DL~h~~~p~~~~v~i~ 99 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLAS-----GEVFGQD--QPIALKLLGSERSFQALEGVAM-----ELEDSLYPLLREVSIG 99 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHH-----TTTTCTT--CCEEEEEECCGGGHHHHHHHHH-----HHHTTTCTTEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHc-----CCcCCCC--ceeEEEecCccchhhhhHHHHH-----hHHhhhhhhcCCcEEe
Confidence 36999999 79999999887765 2442111 2355544 32 2211 1222222333322222
Q ss_pred CCHHHHhcccCCcEEEEccCCC---CC-----------CCHHHHHHHHcc-CCCceEEecCCCC
Q 010990 306 NNLLDAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASF-NEKPLILALSNPT 354 (496)
Q Consensus 306 ~~L~e~v~~vkptvLIG~S~~~---g~-----------Ft~evv~~M~~~-~~rPIIFaLSNPt 354 (496)
.+..+++++ .|+.|=+.+.+ |- .=+++.+.+.++ +..-||+-.|||.
T Consensus 100 ~~~y~~~~d--aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv 161 (375)
T 7mdh_A 100 IDPYEVFED--VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPC 161 (375)
T ss_dssp SCHHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred cCCHHHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch
Confidence 456788887 88877454433 21 113455567676 7889999999995
No 436
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=53.68 E-value=11 Score=38.92 Aligned_cols=38 Identities=8% Similarity=0.045 Sum_probs=28.3
Q ss_pred cceEEEeCcChHHHHHHHHHHH-HHHH-hcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIAL-EISK-QTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~-~~~~-~~G~~~eeA~~~i~~vD~~ 280 (496)
..+|+|+|+|.||+..|..|.. .... ..| .++.++|+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g-------~~V~lie~~ 42 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLD-------MAVDMLEML 42 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCC-------EEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCC-------CeEEEEecC
Confidence 4689999999999999999976 4210 002 369999986
No 437
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=53.59 E-value=12 Score=37.69 Aligned_cols=35 Identities=14% Similarity=0.361 Sum_probs=27.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
.+.+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~~ 38 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEARD 38 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECCC
Confidence 356899999999999999988653 53 577887753
No 438
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=53.58 E-value=27 Score=34.56 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=24.4
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
-..++|+|.|||..|...+.+... .|. ++++.+|+
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDI 223 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 346799999999877766655433 264 46888875
No 439
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=53.57 E-value=41 Score=33.07 Aligned_cols=98 Identities=17% Similarity=0.124 Sum_probs=55.4
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhc
Q 010990 236 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 313 (496)
Q Consensus 236 d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~ 313 (496)
..+|+|.|| |-.|-.+++.|++ .| -+++.+|++- .....+...+..+.. +-....++.++++
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVTE 92 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHHT
T ss_pred CCeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHhC
Confidence 468999998 7788888777764 25 3688887752 110101111111111 1111235777776
Q ss_pred ccCCcEEEEccCCCCC--C---------------CHHHHHHHHccCCCceEEecC
Q 010990 314 VIKPTILIGSSGVGRT--F---------------TKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 314 ~vkptvLIG~S~~~g~--F---------------t~evv~~M~~~~~rPIIFaLS 351 (496)
++|++|=+.+.... + +..+++++.+..-+.|||.=|
T Consensus 93 --~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 93 --GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp --TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred --CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 59999988775431 1 235666766555557777544
No 440
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=53.53 E-value=8 Score=38.58 Aligned_cols=35 Identities=17% Similarity=0.408 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 283 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi 283 (496)
..++||+|+|.||+..|..+.+ .| ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 3589999999999999988843 12 79999987543
No 441
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=53.51 E-value=9.8 Score=39.05 Aligned_cols=34 Identities=29% Similarity=0.408 Sum_probs=27.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+.+|+|+|||.||+..|..+.+. |. ++.++|++
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-----G~-------~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-----GA-------RAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecC
Confidence 356899999999999999888653 53 68999965
No 442
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=53.38 E-value=14 Score=38.27 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=28.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
..+|+|+|+|.||+..|..|... |- ..++.++|+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~ 40 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQ 40 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCC
Confidence 35899999999999999998763 41 1479999986
No 443
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=53.35 E-value=27 Score=34.60 Aligned_cols=34 Identities=18% Similarity=0.129 Sum_probs=24.0
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGT 224 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 46799999999887766655433 264 46888875
No 444
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=53.35 E-value=23 Score=32.40 Aligned_cols=37 Identities=24% Similarity=0.290 Sum_probs=23.8
Q ss_pred CCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 232 GTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 232 ~~l~d~riv~~GAG~-Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
..+++.+++|.||++ .|..+|+.|+ + +|. +++++|++
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~----~-~G~-------~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYA----A-HGA-------SVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHH----H-TTC-------EEEEEESC
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHH----H-CCC-------EEEEEecC
Confidence 357888999999853 3444444443 3 363 58888875
No 445
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=53.28 E-value=12 Score=35.03 Aligned_cols=88 Identities=16% Similarity=0.196 Sum_probs=53.9
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHH
Q 010990 233 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 311 (496)
Q Consensus 233 ~l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~ 311 (496)
+-...||+|.|| |-.|-.+++.|++ .| -+++.+|++ .. ++.+ ..++.++
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~-Dl~d-----------~~~~~~~ 58 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DL-DITN-----------VLAVNKF 58 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TC-CTTC-----------HHHHHHH
T ss_pred ccccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cC-CCCC-----------HHHHHHH
Confidence 345678999987 7777777777653 24 358888774 11 1221 1246677
Q ss_pred hcccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010990 312 VKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 312 v~~vkptvLIG~S~~~g~----------------Ft~evv~~M~~~~~rPIIFaLS 351 (496)
++.+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 59 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 59 FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 776679999988875431 03466777766544 7887655
No 446
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=53.24 E-value=9.5 Score=38.11 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+|+|+|||.+|+..|..|.+. |... .-..++.++++.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~-----G~~~-~~~~~V~vlEa~ 43 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKE-----IKEK-NLPLELTLVEAS 43 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-----HTTT-TCSEEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHHh-----cccc-CCCCCEEEEECC
Confidence 5899999999999999999875 3100 001357777765
No 447
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=53.21 E-value=10 Score=38.12 Aligned_cols=34 Identities=24% Similarity=0.493 Sum_probs=27.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+.+|+|+|||.+|+..|..|.+ .| .++.++|+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-----~g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-----KG-------HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEEecC
Confidence 4689999999999999998864 24 4788888753
No 448
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=53.12 E-value=12 Score=37.22 Aligned_cols=35 Identities=17% Similarity=0.347 Sum_probs=27.0
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
++.+|+|+|||.||+..|..|.+. |. .++.++++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-----g~------~~v~v~E~~ 39 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-----GF------HDYTILERT 39 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEECC
Confidence 456899999999999999988652 51 357777765
No 449
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=53.08 E-value=12 Score=36.11 Aligned_cols=36 Identities=31% Similarity=0.591 Sum_probs=27.9
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+.-|+|+|||+||+..|-.|.+. +.|+ ++.++|+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 456799999999999999888643 1254 68889875
No 450
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=53.05 E-value=7.6 Score=38.31 Aligned_cols=36 Identities=28% Similarity=0.415 Sum_probs=30.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+|++.+|||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57889999999999999999999764 5 358888864
No 451
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=52.90 E-value=12 Score=38.19 Aligned_cols=34 Identities=12% Similarity=0.200 Sum_probs=27.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+|||+|||.||+..|..|.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999987631 13 4799999875
No 452
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=52.60 E-value=24 Score=35.26 Aligned_cols=49 Identities=18% Similarity=0.076 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 219 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 219 ~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
.++..+.|++..+. -..++|+|+|||..|...+.+.. + .|. ++++.+|+
T Consensus 170 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~aiqlAk-~----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 170 ILPTGYHGAVTAGV-GPGSTVYVAGAGPVGLAAAASAR-L----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHHHTTC-CTTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEEES
T ss_pred HHHHHHHHHHHcCC-CCCCEEEEECCcHHHHHHHHHHH-H----CCC------CeEEEEcC
Confidence 34455667764333 35679999999987766655443 2 364 56887776
No 453
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=52.43 E-value=23 Score=34.49 Aligned_cols=50 Identities=14% Similarity=-0.055 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 219 VLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 219 ~LAgll~Alr~~g~~l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.++..+.+++-...--..++++|.|| |..|..++.++.. .|. +++.+|++
T Consensus 129 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G~-------~Vi~~~~~ 179 (333)
T 1wly_A 129 KGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARH-----LGA-------TVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 44445556653333345689999996 8888888777654 353 58877764
No 454
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=52.37 E-value=1.1e+02 Score=31.27 Aligned_cols=129 Identities=12% Similarity=0.110 Sum_probs=82.1
Q ss_pred HHHHHHHHHhhCCCeeeEeeeCCCccHHHHHHHHcCCCceee--cCCCchhHHHHHHHHHHHHHhCCC------------
Q 010990 168 DEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGT------------ 233 (496)
Q Consensus 168 defv~av~~~fGp~~li~~EDf~~~~af~iL~~yr~~~~~Fn--DDiQGTa~V~LAgll~Alr~~g~~------------ 233 (496)
...++ +-.+| .++++ +-.++. .+.+.|.+| .++||.| || .---+=+||=++.=.+..|.-
T Consensus 112 ~DTar-vLs~~-~D~Iv-iR~~~~-~~~~~lA~~-s~vPVINag~d-~~HPtQaLaDl~TI~E~~G~~~~~~~~~~~~~~ 185 (353)
T 3sds_A 112 YDTSV-VISSM-VSCIV-ARVGPH-SDIANLAKH-SSVPVINALCD-TFHPLQAIADFLTIHESFASQSATHGTHPSSLG 185 (353)
T ss_dssp HHHHH-HHHTS-CSEEE-EECSSH-HHHHHHHHH-CSSCEEEEECS-SCCHHHHHHHHHHHHHHTC--------CTTCCS
T ss_pred HHHHH-HHHHh-cCEEE-EEeCCh-HHHHHHHhh-CCCCEEECCCC-CCCcHHHHHHHHHHHHHhCCCcccccccccccc
Confidence 34444 44567 55444 555543 344555565 4799999 44 335556777777766666642
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-------c---C
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-------H---E 303 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-------~---~ 303 (496)
|+..||+++|-+. -+|+-++.++.+ -|+ +|.++=.+|+- +++.-..++++ . .
T Consensus 186 l~glkva~vGD~~---nva~Sl~~~l~~-lG~-------~v~~~~P~~~~-------~~~~i~~~~~~~a~~~~~g~~~~ 247 (353)
T 3sds_A 186 LEGLKIAWVGDAN---NVLFDLAIAATK-MGV-------NVAVATPRGYE-------IPSHIVELIQKAREGVQSPGNLT 247 (353)
T ss_dssp CTTCEEEEESCCC---HHHHHHHHHHHH-TTC-------EEEEECCTTCC-------CCHHHHHHHHHHHTTCSSCCCEE
T ss_pred cCCCEEEEECCCc---hHHHHHHHHHHH-cCC-------EEEEECCcccC-------CCHHHHHHHHHhhhhccCCCeEE
Confidence 5899999999985 488888888776 475 68888877762 22322222221 0 1
Q ss_pred CCCCHHHHhcccCCcEEEE
Q 010990 304 PVNNLLDAVKVIKPTILIG 322 (496)
Q Consensus 304 ~~~~L~e~v~~vkptvLIG 322 (496)
...++.|+|++ +||+.-
T Consensus 248 ~~~d~~eav~~--aDVvyt 264 (353)
T 3sds_A 248 QTTVPEVAVKD--ADVIVT 264 (353)
T ss_dssp EESCHHHHTTT--CSEEEE
T ss_pred EECCHHHHhcC--CCEEEe
Confidence 12689999998 999985
No 455
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=52.31 E-value=9.6 Score=40.58 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=27.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+--|+|+|+|.+|+++|..+.. .|+ ++.++++.
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~-----~G~-------~V~LlEk~ 50 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQV-----RGI-------QTGLVEMN 50 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEECC
Confidence 4579999999999999988864 375 58889886
No 456
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=52.27 E-value=8.2 Score=40.40 Aligned_cols=42 Identities=14% Similarity=0.226 Sum_probs=0.0
Q ss_pred EEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEE--EEcCC
Q 010990 239 FLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC--LVDSK 280 (496)
Q Consensus 239 iv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~--~vD~~ 280 (496)
||++|||.+|+++|-.|.+......-+...+.....| ++|++
T Consensus 42 vi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~ 85 (501)
T 4b63_A 42 LLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQ 85 (501)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESS
T ss_pred EEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEecc
No 457
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=52.19 E-value=9.8 Score=38.78 Aligned_cols=22 Identities=23% Similarity=0.286 Sum_probs=19.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHH
Q 010990 237 HRFLFLGAGEAGTGIAELIALE 258 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~ 258 (496)
.+|||+|||-+|+..|-.|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 3799999999999999888653
No 458
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=52.18 E-value=7.6 Score=38.72 Aligned_cols=96 Identities=16% Similarity=0.127 Sum_probs=51.7
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhc
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 313 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~ 313 (496)
....||.|+|+|..|-..++.+.. +..|. +-+.++|++ ..+ .....+.|--......++.|+++
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~---~~~~~------~lvav~d~~----~~~---~~~~a~~~g~~~~~~~~~~~ll~ 84 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLAN---TVSGV------EVVAVCDIV----AGR---AQAALDKYAIEAKDYNDYHDLIN 84 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH---TCTTE------EEEEEECSS----TTH---HHHHHHHHTCCCEEESSHHHHHH
T ss_pred CCeeeEEEECCcHHHHHHHHHHHh---hCCCc------EEEEEEeCC----HHH---HHHHHHHhCCCCeeeCCHHHHhc
Confidence 445699999999988766655532 11122 223466653 111 22222222100122378999999
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEE
Q 010990 314 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 348 (496)
Q Consensus 314 ~vkptvLIG~S~~~g~Ft~evv~~M~~~~~rPIIF 348 (496)
.-++|+++ ++++. .+-.+++....+. ..+|+.
T Consensus 85 ~~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 116 (357)
T 3ec7_A 85 DKDVEVVI-ITASN-EAHADVAVAALNA-NKYVFC 116 (357)
T ss_dssp CTTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCCCCEEE-EcCCc-HHHHHHHHHHHHC-CCCEEe
Confidence 87899988 55544 3455555544332 245553
No 459
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=52.13 E-value=14 Score=37.11 Aligned_cols=79 Identities=10% Similarity=0.013 Sum_probs=41.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 315 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 315 (496)
..+|+++|||+.|.-+++.+ |++.+. =.+++|.+=. -.++ .++....+. -+- |.++..
T Consensus 319 gk~v~~yGa~~~g~~l~~~~--------~~~~~~---i~~~~D~~~~-k~g~--~~~g~~ipi-------~~p-~~~~~~ 376 (416)
T 4e2x_A 319 GRSVVGYGATAKSATVTNFC--------GIGPDL---VHSVYDTTPD-KQNR--LTPGAHIPV-------RPA-SAFSDP 376 (416)
T ss_dssp TCCEEEECCCSHHHHHHHHH--------TCCTTT---SCCEEESCGG-GTTE--ECTTTCCEE-------EEG-GGCCSS
T ss_pred CCeEEEEccccHHHHHHHhc--------CCCcce---eeEEEeCCcc-ccCc--cCCCCCCcC-------CCH-HHHhhc
Confidence 34899999999997665554 553211 2346676410 0000 011111111 112 224446
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHH
Q 010990 316 KPTILIGSSGVGRTFTKEVIEAMA 339 (496)
Q Consensus 316 kptvLIG~S~~~g~Ft~evv~~M~ 339 (496)
+||.+|=++- .+.+||++.+.
T Consensus 377 ~~d~vl~~~~---~~~~ei~~~~~ 397 (416)
T 4e2x_A 377 YPDYALLFAW---NHAEEIMAKEQ 397 (416)
T ss_dssp CCSEEEESCG---GGHHHHHHHCH
T ss_pred CCCEEEEecc---hhHHHHHHHHH
Confidence 8996553422 57899998875
No 460
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=51.95 E-value=11 Score=43.41 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=28.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
..+|+|+|+|.||+..|..|.+. |. +++.++|++
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~-----G~------~~Vtv~E~~ 220 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARL-----GY------SDITIFEKQ 220 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESS
T ss_pred CCEEEEECccHHHHHHHHHHHhc-----CC------CcEEEEeCC
Confidence 56899999999999999998653 64 268999986
No 461
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=51.93 E-value=28 Score=34.39 Aligned_cols=50 Identities=20% Similarity=0.084 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 219 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 219 ~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
.++..+.|+.-...--..++|+|+|+|..|...+.+... .|. ++++.+|+
T Consensus 174 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-----~Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKV-----CGA------SIIIAVDI 223 (371)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred hHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 444444555322222346799999999877766655433 264 46887775
No 462
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=51.91 E-value=9.9 Score=38.65 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=27.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
+|||+|+|.||+..|..+.+.. .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999987531 13 47999998753
No 463
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=51.75 E-value=15 Score=38.05 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=26.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 278 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD 278 (496)
+.+++|+|||.||+..|..+.+. .|. ++.++|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~----~G~-------~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASL----HKK-------RVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHH----HCC-------CEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHH----cCC-------EEEEEe
Confidence 45899999999999999998761 153 699999
No 464
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=51.71 E-value=14 Score=39.05 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=31.0
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 010990 232 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 283 (496)
Q Consensus 232 ~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi 283 (496)
.+..+..|||+|+|.||+..|-.+.+ .|. ++.++++...+
T Consensus 122 ~~~~~~DVvVVGaG~aGl~aA~~la~-----~G~-------~V~vlEk~~~~ 161 (571)
T 1y0p_A 122 APHDTVDVVVVGSGGAGFSAAISATD-----SGA-------KVILIEKEPVI 161 (571)
T ss_dssp CCSEECSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSSS
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEeCCCCC
Confidence 34456789999999999999988764 364 68999987554
No 465
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=51.64 E-value=18 Score=35.58 Aligned_cols=48 Identities=21% Similarity=0.093 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 219 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 219 ~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
.++..+.|++..+.+ ..++|+|.|||..|...+.+... .|. +++.+|+
T Consensus 153 ~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~a~qla~~-----~Ga-------~Vi~~~~ 200 (352)
T 1e3j_A 153 PLSVGVHACRRAGVQ-LGTTVLVIGAGPIGLVSVLAAKA-----YGA-------FVVCTAR 200 (352)
T ss_dssp HHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred hHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEcC
Confidence 444556666655443 46799999998777665554432 363 3777765
No 466
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=51.61 E-value=28 Score=31.19 Aligned_cols=94 Identities=16% Similarity=0.194 Sum_probs=50.9
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCC-CCCHHHHhcc
Q 010990 238 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEP-VNNLLDAVKV 314 (496)
Q Consensus 238 riv~~G-AG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~-~~~L~e~v~~ 314 (496)
||+|.| +|-.|-.+++.|++ .| -+++.++++.- +...+ .+..+.+ +-.. ..++.+++++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~~----~~~~~--~~~~~~~~D~~d~~~~~~~~~~~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKVE----QVPQY--NNVKAVHFDVDWTPEEMAKQLHG 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSGG----GSCCC--TTEEEEECCTTSCHHHHHTTTTT
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCcc----chhhc--CCceEEEecccCCHHHHHHHHcC
Confidence 789999 46667666666653 35 36888887521 11111 1111111 1112 2346666764
Q ss_pred cCCcEEEEccCCCCC--------CCHHHHHHHHccCCCceEEecC
Q 010990 315 IKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 315 vkptvLIG~S~~~g~--------Ft~evv~~M~~~~~rPIIFaLS 351 (496)
+|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 9999987775421 1456777776544445555433
No 467
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=51.57 E-value=20 Score=36.45 Aligned_cols=115 Identities=19% Similarity=0.203 Sum_probs=63.3
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccC--CCcCCCchhchhhccccCCCCCHH
Q 010990 233 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS--SRKDSLQHFKKPWAHEHEPVNNLL 309 (496)
Q Consensus 233 ~l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~--~r~~~l~~~k~~~a~~~~~~~~L~ 309 (496)
+.+-.||.|.|| |..|..+|-+|... .=++... ...+.|+|...-... +-.-+|++---+.........+..
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~----~l~~~~~-~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~ 95 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARG----ALLGPTT-PVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPR 95 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHT----TTTCTTC-CEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHH
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhc----cccCCCC-ccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChH
Confidence 356679999997 98888888777652 1111111 136889997421110 000002211111111111225688
Q ss_pred HHhcccCCcEEEEccCCCCC--CC------------HHHHHHHHccC-CCceEEecCCCC
Q 010990 310 DAVKVIKPTILIGSSGVGRT--FT------------KEVIEAMASFN-EKPLILALSNPT 354 (496)
Q Consensus 310 e~v~~vkptvLIG~S~~~g~--Ft------------~evv~~M~~~~-~rPIIFaLSNPt 354 (496)
+++++ .|+.|=+.+.+.- -| +++.+.+++++ +.-+|+-.|||.
T Consensus 96 ~a~~~--advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPv 153 (345)
T 4h7p_A 96 VAFDG--VAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPA 153 (345)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HHhCC--CCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCc
Confidence 88888 9998855554421 23 34556666665 566888999995
No 468
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=51.50 E-value=15 Score=34.75 Aligned_cols=36 Identities=19% Similarity=0.421 Sum_probs=26.9
Q ss_pred CcccceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 233 TLAEHRFLFLGAGE---AGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 233 ~l~d~riv~~GAG~---Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+|+++++||-||++ .|.+||+.|.+ +|. +++++|++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~-----~Ga-------~Vvi~~r~ 41 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQ-----LGA-------KLVFTYRK 41 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 68899999999853 55667777654 474 68888875
No 469
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=51.47 E-value=16 Score=32.97 Aligned_cols=100 Identities=14% Similarity=0.061 Sum_probs=54.3
Q ss_pred ccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHh
Q 010990 235 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 312 (496)
Q Consensus 235 ~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v 312 (496)
...+|+|.|| |-.|-.+++.|++ .|- .-+++.++++. .+.+.+. .+..+.. +-....++.+++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~-----~~~-----g~~V~~~~r~~----~~~~~~~-~~~~~~~~D~~d~~~~~~~~ 67 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKE-----GSD-----KFVAKGLVRSA----QGKEKIG-GEADVFIGDITDADSINPAF 67 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHH-----TTT-----TCEEEEEESCH----HHHHHTT-CCTTEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHh-----cCC-----CcEEEEEEcCC----CchhhcC-CCeeEEEecCCCHHHHHHHH
Confidence 4578999996 7777777777654 220 13688777641 0000010 0001111 111123577777
Q ss_pred cccCCcEEEEccCCCCC----------------C-------------CHHHHHHHHccCCCceEEecC
Q 010990 313 KVIKPTILIGSSGVGRT----------------F-------------TKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 313 ~~vkptvLIG~S~~~g~----------------F-------------t~evv~~M~~~~~rPIIFaLS 351 (496)
+. +|++|=+.+.... | +..++++|.+..-+.|||.=|
T Consensus 68 ~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 68 QG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp TT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred cC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 75 8999977664321 1 356778887665556777543
No 470
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=51.46 E-value=36 Score=33.99 Aligned_cols=79 Identities=16% Similarity=0.188 Sum_probs=53.5
Q ss_pred HHHHHHHHHhhCCCeeeEeeeCCCc-------cHHHHHHHHcCCCceeecCCCchhHHHHHHHHHHHHHhCCCcccceEE
Q 010990 168 DEFMSAVKQNYGEKVLIQFEDFANH-------NAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFL 240 (496)
Q Consensus 168 defv~av~~~fGp~~li~~EDf~~~-------~af~iL~~yr~~~~~FnDDiQGTa~V~LAgll~Alr~~g~~l~d~riv 240 (496)
-+.+++.-+.+.+..+|| |++.. .-+++..+|.-.+|++|-|-+|+..- .++
T Consensus 94 ~~V~eaaL~~~~Ga~iIN--dIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t---------------~~~---- 152 (300)
T 3k13_A 94 WEVIEAGLKCLQGKSIVN--SISLKEGEEVFLEHARIIKQYGAATVVMAFDEKGQADT---------------AAR---- 152 (300)
T ss_dssp HHHHHHHHHHCSSCCEEE--EECSTTCHHHHHHHHHHHHHHTCEEEEESEETTEECCS---------------HHH----
T ss_pred HHHHHHHHHhcCCCCEEE--eCCcccCChhHHHHHHHHHHhCCeEEEEeeCCCCCCCC---------------HHH----
Confidence 356666666653456766 77655 56788899999999999888887632 111
Q ss_pred EeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 241 FLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 241 ~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
-+-+++.+...++.+.|++ +++|+ +|.
T Consensus 153 -------~~~i~~r~~~~~~~~~Gi~----~~~Ii-lDP 179 (300)
T 3k13_A 153 -------KIEVCERAYRLLVDKVGFN----PHDII-FDP 179 (300)
T ss_dssp -------HHHHHHHHHHHHHHHTCCC----GGGEE-EEC
T ss_pred -------HHHHHHHHHHHHHHHcCCC----HHHEE-EeC
Confidence 1357888877764457995 46777 676
No 471
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=51.44 E-value=12 Score=38.31 Aligned_cols=35 Identities=20% Similarity=0.394 Sum_probs=28.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
+.+|+|+|||-+|+..|-.|..+ | +++.++|++.-
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~-----G-------~~V~vlE~~~~ 45 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVD-----G-------KKVLHIDKQDH 45 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEeCCCC
Confidence 45899999999999999888653 6 47999998754
No 472
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=51.27 E-value=16 Score=37.26 Aligned_cols=33 Identities=21% Similarity=0.388 Sum_probs=26.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
..+|+|+|||.+|+..|..|.+. |. ++.++++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~-----g~-------~v~vlE~~ 65 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA-----GH-------QVTVLEAS 65 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH-----TC-------EEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 46899999999999999998763 53 57777765
No 473
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=51.16 E-value=11 Score=39.05 Aligned_cols=36 Identities=28% Similarity=0.477 Sum_probs=27.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
.+|||+|||.||+..|..+.+.- ..| .++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G-------~~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PET-------TQVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTT-------EEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCc-------CEEEEEeCCC
Confidence 47999999999999999886530 004 3799999874
No 474
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=51.07 E-value=9.5 Score=35.68 Aligned_cols=83 Identities=20% Similarity=0.324 Sum_probs=53.6
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 010990 238 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 316 (496)
Q Consensus 238 riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 316 (496)
||+|.|| |-.|-.+++.|++ .| -+++.+|+. .. ++.+ ..++.++++..+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~-D~~d-----------~~~~~~~~~~~~ 56 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNP-----EE-------YDIYPFDKK------LL-DITN-----------ISQVQQVVQEIR 56 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCT-----TT-------EEEEEECTT------TS-CTTC-----------HHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEeccc------cc-CCCC-----------HHHHHHHHHhcC
Confidence 8999996 8888877777753 24 368888871 11 1221 134677787778
Q ss_pred CcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010990 317 PTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 317 ptvLIG~S~~~g~----------------Ft~evv~~M~~~~~rPIIFaLS 351 (496)
+|++|=+.+.... -+..+++++.+..- .+||.=|
T Consensus 57 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS 106 (287)
T 3sc6_A 57 PHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYIST 106 (287)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 9999988775431 03457777766555 4887554
No 475
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=51.03 E-value=14 Score=34.47 Aligned_cols=36 Identities=19% Similarity=0.298 Sum_probs=23.3
Q ss_pred CcccceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 233 TLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 233 ~l~d~riv~~GAG-~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+|++.+++|.||+ -.|..+|+.|+ + +|. +++++|++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~----~-~G~-------~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAV----A-AGA-------RVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHH----H-TTC-------EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH----H-CCC-------EEEEEeCC
Confidence 4677899999984 34445555554 3 363 58888764
No 476
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=50.71 E-value=12 Score=40.92 Aligned_cols=39 Identities=23% Similarity=0.405 Sum_probs=28.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+..|+|+|||.+|+..|-.|.....+..|+ ++.++|+..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi-------~v~viE~~~ 46 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDL-------KVRIIDKRS 46 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTC-------CEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCC-------CEEEEeCCC
Confidence 457999999999999998887621111365 588898753
No 477
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=50.38 E-value=12 Score=34.31 Aligned_cols=92 Identities=15% Similarity=0.181 Sum_probs=50.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchh----hcc-ccCCCCCHHHH-
Q 010990 238 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----WAH-EHEPVNNLLDA- 311 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~----~a~-~~~~~~~L~e~- 311 (496)
||+|+|+|..|..+|+.|... |. ++.++|++ . +.+...... +.. +......|.++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g~-------~v~vid~~----~---~~~~~l~~~~~~~~i~gd~~~~~~l~~a~ 62 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----KY-------GVVIINKD----R---ELCEEFAKKLKATIIHGDGSHKEILRDAE 62 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----TC-------CEEEEESC----H---HHHHHHHHHSSSEEEESCTTSHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC----H---HHHHHHHHHcCCeEEEcCCCCHHHHHhcC
Confidence 799999999999999988652 53 68888874 1 111111111 101 11111235444
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHc-cCCCceEEecCC
Q 010990 312 VKVIKPTILIGSSGVGRTFTKEVIEAMAS-FNEKPLILALSN 352 (496)
Q Consensus 312 v~~vkptvLIG~S~~~g~Ft~evv~~M~~-~~~rPIIFaLSN 352 (496)
++ ++|++|-+.... .....+..+++ .+..+-|++..|
T Consensus 63 i~--~ad~vi~~~~~d--~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 63 VS--KNDVVVILTPRD--EVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp CC--TTCEEEECCSCH--HHHHHHHHHHHHTSCCCEEEECCC
T ss_pred cc--cCCEEEEecCCc--HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 43 589888655432 22334444444 355555666554
No 478
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=50.19 E-value=50 Score=30.96 Aligned_cols=94 Identities=15% Similarity=0.192 Sum_probs=52.3
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 010990 238 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 315 (496)
Q Consensus 238 riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~v 315 (496)
||+|.|| |-.|-.+++.|++ .|. +++.+|+.. ........ ....+.. +-.... +.++++.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~-----~g~-------~V~~~~r~~---~~~~~~~~-~~~~~~~~Dl~d~~-~~~~~~~- 63 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVE-----LGY-------EVVVVDNLS---SGRREFVN-PSAELHVRDLKDYS-WGAGIKG- 63 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEECCCS---SCCGGGSC-TTSEEECCCTTSTT-TTTTCCC-
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-------EEEEEeCCC---CCchhhcC-CCceEEECccccHH-HHhhcCC-
Confidence 7999998 8888888887765 353 688887641 11111011 1111111 111112 5555543
Q ss_pred CCcEEEEccCCCCC-C---------------CHHHHHHHHccCCCceEEecC
Q 010990 316 KPTILIGSSGVGRT-F---------------TKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 316 kptvLIG~S~~~g~-F---------------t~evv~~M~~~~~rPIIFaLS 351 (496)
|++|=+.+.... . +..+++++.+..-+.|||.=|
T Consensus 64 --d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 64 --DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp --SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred --CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 999987774321 1 235677776666677888655
No 479
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=50.17 E-value=28 Score=34.55 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=24.1
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 234 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 234 l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
-..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 228 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKI-----AGA------SRIIAIDI 228 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 346799999999877666554432 364 46888875
No 480
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=50.12 E-value=11 Score=38.13 Aligned_cols=33 Identities=18% Similarity=0.313 Sum_probs=25.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+.+|+|+|||.+|+..|..|.+ .|. ++.++++.
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~-----~g~-------~v~v~E~~ 48 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRS-----RGT-------DAVLLESS 48 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 3489999999999999988864 253 56677665
No 481
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=50.05 E-value=12 Score=37.73 Aligned_cols=34 Identities=26% Similarity=0.471 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.+|+|+|||.+|+..|..|.+ .|.+ .++.++++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~-----~G~~-----~~V~vlEa~ 36 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR-----APCP-----PKVVLVESS 36 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT-----SSSC-----CEEEEECSS
T ss_pred ceEEEECCcHHHHHHHHHHHh-----CCCC-----CcEEEEeCC
Confidence 589999999999999999865 3531 168888875
No 482
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=50.05 E-value=13 Score=38.11 Aligned_cols=33 Identities=18% Similarity=0.376 Sum_probs=26.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+..|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~-----~G~-------~V~liEk~ 37 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAA-----LGK-------KVAIAEEF 37 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 3579999999999999988864 353 69999984
No 483
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=49.91 E-value=13 Score=41.33 Aligned_cols=36 Identities=28% Similarity=0.463 Sum_probs=29.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 282 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GL 282 (496)
+.+|+|+|||.+|+.+|-.|.+. |. .++.++|+..+
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~-----G~------~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTR-----GW------NNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEeCCCC
Confidence 46899999999999999988653 53 37999998754
No 484
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=49.89 E-value=90 Score=30.25 Aligned_cols=63 Identities=24% Similarity=0.245 Sum_probs=41.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhc-CCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcc
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQT-KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 314 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~-G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~ 314 (496)
..||+|+|.|+++. +|..+...+.+.. | .++++.... + + +
T Consensus 37 ~~~I~i~G~G~S~~-~a~~~~~~l~~~~~~-------~~~~~~~~~--------~-~--------------------~-- 77 (302)
T 1tzb_A 37 MPRLYISGMGGSGV-VADLIRDFSLTWNWE-------VEVIAVKDY--------F-L--------------------K-- 77 (302)
T ss_dssp CSEEEEECCHHHHH-HHHHHHHHHHHTTCS-------SEEEEECSS--------C-C--------------------C--
T ss_pred CCEEEEEEecHHHH-HHHHHHHHHHhhcCC-------ceEEEeCCc--------C-C--------------------C--
Confidence 46999999999875 6666665554322 2 234433211 0 1 1
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHH
Q 010990 315 IKPTILIGSSGVGRTFTKEVIEAMA 339 (496)
Q Consensus 315 vkptvLIG~S~~~g~Ft~evv~~M~ 339 (496)
-+-|++|++|-.|. |+|+++++.
T Consensus 78 ~~~dlvI~iS~SG~--T~e~~~a~~ 100 (302)
T 1tzb_A 78 ARDGLLIAVSYSGN--TIETLYTVE 100 (302)
T ss_dssp CSSSEEEEECSSSC--CHHHHHHHH
T ss_pred CCCCEEEEEeCCCC--CHHHHHHHH
Confidence 35789999999886 999999885
No 485
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=49.79 E-value=14 Score=34.90 Aligned_cols=98 Identities=15% Similarity=0.163 Sum_probs=56.1
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 010990 237 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 314 (496)
Q Consensus 237 ~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~ 314 (496)
.+|+|.|| |-.|-.+++.|++.- .| .+++.+|++. .. ..+.+ +..+.. +-....++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~---~g-------~~V~~~~r~~----~~-~~~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLY---GT-------ENVIASDIRK----LN-TDVVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHH---CG-------GGEEEEESCC----CS-CHHHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhC---CC-------CEEEEEcCCC----cc-ccccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 888888888776520 12 3688887641 11 00100 111111 11112357778886
Q ss_pred cCCcEEEEccCCCCC---------------CCHHHHHHHHccCCCceEEec
Q 010990 315 IKPTILIGSSGVGRT---------------FTKEVIEAMASFNEKPLILAL 350 (496)
Q Consensus 315 vkptvLIG~S~~~g~---------------Ft~evv~~M~~~~~rPIIFaL 350 (496)
.++|++|=+.+.... -+..+++++.+..-+.+||.=
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 117 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPS 117 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 689999988775321 133567777665545677743
No 486
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=49.73 E-value=11 Score=43.63 Aligned_cols=42 Identities=19% Similarity=0.310 Sum_probs=33.6
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
+|++.||+++|||.-|+-++..|+.+ |+.-- -.++|.++|.+
T Consensus 422 kL~~~~VlvVGaGGlGsevlk~La~~-----Gv~~g-~~G~i~lvD~D 463 (1015)
T 3cmm_A 422 KIANSKVFLVGSGAIGCEMLKNWALL-----GLGSG-SDGYIVVTDND 463 (1015)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TTTCS-TTCEEEEECCC
T ss_pred HHhcCeEEEEecCHHHHHHHHHHHHc-----CcCcC-CCCeEEEEeCC
Confidence 46778999999999999999999886 65221 12689999987
No 487
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=49.70 E-value=27 Score=34.31 Aligned_cols=50 Identities=16% Similarity=0.109 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 219 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 219 ~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
.++..+.|++..+.+ ..++|+|+|||..|...+.+... .|. ++++.+|+.
T Consensus 151 ~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~~ 200 (352)
T 3fpc_A 151 MMTTGFHGAELANIK-LGDTVCVIGIGPVGLMSVAGANH-----LGA------GRIFAVGSR 200 (352)
T ss_dssp HHHHHHHHHHHTTCC-TTCCEEEECCSHHHHHHHHHHHT-----TTC------SSEEEECCC
T ss_pred hhHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------cEEEEECCC
Confidence 444556667655543 46789999998777655444322 364 578888763
No 488
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=49.63 E-value=34 Score=33.71 Aligned_cols=47 Identities=19% Similarity=0.171 Sum_probs=30.7
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 221 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 221 Agll~Alr~~g~~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
...+.+++..+.+...++|+|.|||..|...+.+... .|. +++.+|+
T Consensus 166 ~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-----~Ga-------~Vi~~~~ 212 (357)
T 2cf5_A 166 VTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKA-----MGH-------HVTVISS 212 (357)
T ss_dssp HHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHH-----HTC-------EEEEEES
T ss_pred HHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeC
Confidence 3345666655544367899999999877766655433 253 5777775
No 489
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=49.56 E-value=2.4 Score=40.76 Aligned_cols=20 Identities=20% Similarity=0.203 Sum_probs=16.7
Q ss_pred eEEEeCcChHHHHHHHHHHH
Q 010990 238 RFLFLGAGEAGTGIAELIAL 257 (496)
Q Consensus 238 riv~~GAG~Ag~GiA~ll~~ 257 (496)
||.|+|+|..|.++|..|..
T Consensus 4 ~I~iIG~G~mG~~la~~l~~ 23 (276)
T 2i76_A 4 VLNFVGTGTLTRFFLECLKD 23 (276)
T ss_dssp CCEEESCCHHHHHHHHTTC-
T ss_pred eEEEEeCCHHHHHHHHHHHH
Confidence 79999999999998877643
No 490
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=49.21 E-value=10 Score=35.23 Aligned_cols=77 Identities=26% Similarity=0.361 Sum_probs=43.2
Q ss_pred CCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-------ccC
Q 010990 232 GTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-------EHE 303 (496)
Q Consensus 232 ~~l~d~riv~~GAG~-Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-------~~~ 303 (496)
.++++.+++|.||+. .|..+|+.|++ +|. +++++|++- +.+...+..+.. +-.
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~-----~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~ 65 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAK-----GGA-------KVVIVDRDK-------AGAERVAGEIGDAALAVAADIS 65 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEESCH-------HHHHHHHHHHCTTEEEEECCTT
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHH-----CCC-------EEEEEcCCH-------HHHHHHHHHhCCceEEEEecCC
Confidence 467888999999864 35555555543 363 588888741 112222222110 111
Q ss_pred CCCCHHHHhccc-----CCcEEEEccCCC
Q 010990 304 PVNNLLDAVKVI-----KPTILIGSSGVG 327 (496)
Q Consensus 304 ~~~~L~e~v~~v-----kptvLIG~S~~~ 327 (496)
...++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 66 KEADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 113455566554 799999777653
No 491
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=49.06 E-value=11 Score=40.99 Aligned_cols=34 Identities=15% Similarity=0.104 Sum_probs=27.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
+..|+|+|||.||+.+|-.|.+ .|. ++.++|+..
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQR-----RGA-------VVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 3689999999999999988864 364 699999853
No 492
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=48.98 E-value=1e+02 Score=30.78 Aligned_cols=131 Identities=17% Similarity=0.132 Sum_probs=84.6
Q ss_pred HHHHhhCCCeeeEeeeCCCccHHHHHHHHcCCCceee--cCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHH
Q 010990 173 AVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTG 250 (496)
Q Consensus 173 av~~~fGp~~li~~EDf~~~~af~iL~~yr~~~~~Fn--DDiQGTa~V~LAgll~Alr~~g~~l~d~riv~~GAG~Ag~G 250 (496)
.+-.+| .++ |-+-.++.. +.+.|.+| .++||.| |..+---+=+||=++.=.+..| +|++.||+++|-|.=+ -
T Consensus 95 rvls~~-~D~-iviR~~~~~-~~~~la~~-~~vPVINag~g~~~HPtQ~LaDl~Ti~e~~g-~l~gl~va~vGD~~~~-r 168 (308)
T 1ml4_A 95 KTVEQY-CDV-IVIRHPKEG-AARLAAEV-AEVPVINAGDGSNQHPTQTLLDLYTIKKEFG-RIDGLKIGLLGDLKYG-R 168 (308)
T ss_dssp HHHTTT-CSE-EEEEESSTT-HHHHHHHT-CSSCEEEEEETTSCCHHHHHHHHHHHHHHSS-CSSSEEEEEESCTTTC-H
T ss_pred HHHHHh-CcE-EEEecCChh-HHHHHHHh-CCCCEEeCccCCccCcHHHHHHHHHHHHHhC-CCCCeEEEEeCCCCcC-c
Confidence 344567 444 457777654 44555565 4699999 4344555567788777666654 6999999999998421 3
Q ss_pred HHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccC----CCCCHHHHhcccCCcEEEEccCC
Q 010990 251 IAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE----PVNNLLDAVKVIKPTILIGSSGV 326 (496)
Q Consensus 251 iA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~----~~~~L~e~v~~vkptvLIG~S~~ 326 (496)
+|+-++.++.+ -|+ ++.++-.+|+-- ++.-..+++... ...++.|++++ +||+.-..=|
T Consensus 169 va~Sl~~~~~~-~G~-------~v~~~~P~~~~~-------~~~~~~~~~~~g~~~~~~~d~~eav~~--aDvvyt~~~q 231 (308)
T 1ml4_A 169 TVHSLAEALTF-YDV-------ELYLISPELLRM-------PRHIVEELREKGMKVVETTTLEDVIGK--LDVLYVTRIQ 231 (308)
T ss_dssp HHHHHHHHGGG-SCE-------EEEEECCGGGCC-------CHHHHHHHHHTTCCEEEESCTHHHHTT--CSEEEECCCC
T ss_pred hHHHHHHHHHH-CCC-------EEEEECCccccC-------CHHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEECCcc
Confidence 67777777655 364 688888887732 222223343221 12689999998 9999976543
No 493
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=48.93 E-value=12 Score=40.42 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=27.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 236 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 236 d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
..+|||+|+|.||+..|..+.+ .| .++.++|+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~-----~g-------~~V~lie~~~ 406 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAA-----RG-------HQVTLFDAHS 406 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 3689999999999999988854 25 3699999864
No 494
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=48.82 E-value=31 Score=32.52 Aligned_cols=91 Identities=16% Similarity=0.159 Sum_probs=48.5
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 010990 237 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 315 (496)
Q Consensus 237 ~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 315 (496)
.+|+|.|| |-.|-.+++.|++ .|. +++.+|+. +.. + . .+.-+-....++.++++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g~-------~V~~~~r~------~~~---~-~-~~~~Dl~d~~~~~~~~~~~ 59 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQ-----NNW-------HAVGCGFR------RAR---P-K-FEQVNLLDSNAVHHIIHDF 59 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHT-----TTC-------EEEEEC-----------------------------CHHHHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEccC------CCC---C-C-eEEecCCCHHHHHHHHHhh
Confidence 58999998 8788888777754 253 57877753 111 0 0 1111212235677888877
Q ss_pred CCcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010990 316 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 351 (496)
Q Consensus 316 kptvLIG~S~~~g~----------------Ft~evv~~M~~~~~rPIIFaLS 351 (496)
++|++|=+.+.... -+..+++++.+... .|||.=|
T Consensus 60 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 110 (315)
T 2ydy_A 60 QPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISS 110 (315)
T ss_dssp CCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 89999988765321 02456777665443 6777544
No 495
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=48.82 E-value=13 Score=34.53 Aligned_cols=35 Identities=31% Similarity=0.365 Sum_probs=22.6
Q ss_pred cccceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 234 LAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 234 l~d~riv~~GAG-~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
|++.+++|.||+ -.|..+|+.|++ +|. +++++|++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~-----~G~-------~V~~~~r~ 37 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLAR-----AGA-------NIVLNGFG 37 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 567899999984 344455555543 363 58887764
No 496
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=48.79 E-value=13 Score=40.31 Aligned_cols=33 Identities=12% Similarity=0.106 Sum_probs=27.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 010990 237 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 281 (496)
Q Consensus 237 ~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~G 281 (496)
..|+|+|||.||+..|-.|.+ .|. ++.++|+..
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLR-----RGW-------QVTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 589999999999999988864 363 799999853
No 497
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=48.77 E-value=30 Score=34.28 Aligned_cols=34 Identities=21% Similarity=0.178 Sum_probs=23.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 235 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 235 ~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
..++|+|.|||..|...+.+... .|. ++++.+|+
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~ 224 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKA-----AGA------ARIIGVDI 224 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 46799999998777666555432 364 46888875
No 498
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=48.26 E-value=32 Score=33.41 Aligned_cols=51 Identities=16% Similarity=0.203 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHhCCCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 010990 217 SVVLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 279 (496)
Q Consensus 217 ~V~LAgll~Alr~~g~~l~d~riv~~GA-G~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~ 279 (496)
.+.++..+.|+.-...--..++++|.|| |..|..++.++.. .|. +++.+|+
T Consensus 131 ~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 182 (336)
T 4b7c_A 131 GMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARL-----KGC-------RVVGIAG 182 (336)
T ss_dssp SHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 3455666667744444445789999999 8888777766543 353 5787775
No 499
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=48.19 E-value=14 Score=34.89 Aligned_cols=77 Identities=13% Similarity=0.166 Sum_probs=42.2
Q ss_pred CCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-------ccC
Q 010990 232 GTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-------EHE 303 (496)
Q Consensus 232 ~~l~d~riv~~GAG~-Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-------~~~ 303 (496)
.+|++++++|.||++ .|..+|+.|+ + +|. +++++|++- +.+......+.. |-.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~----~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~ 67 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLA----R-AGA-------RVVLADLPE-------TDLAGAAASVGRGAVHHVVDLT 67 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHH----H-TTC-------EEEEEECTT-------SCHHHHHHHHCTTCEEEECCTT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHH----H-CCC-------EEEEEcCCH-------HHHHHHHHHhCCCeEEEECCCC
Confidence 357888999999853 3444555554 3 363 588888751 122222222210 111
Q ss_pred CCCCHHHHhccc-----CCcEEEEccCCC
Q 010990 304 PVNNLLDAVKVI-----KPTILIGSSGVG 327 (496)
Q Consensus 304 ~~~~L~e~v~~v-----kptvLIG~S~~~ 327 (496)
...++.++++.+ +.|+||=..+..
T Consensus 68 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 68 NEVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 112455555544 799999777654
No 500
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=47.90 E-value=70 Score=29.93 Aligned_cols=37 Identities=22% Similarity=0.279 Sum_probs=22.8
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 010990 233 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 280 (496)
Q Consensus 233 ~l~d~riv~~GAG~Ag~GiA~ll~~~~~~~~G~~~eeA~~~i~~vD~~ 280 (496)
++++.+++|.||+. ||...++..+.+ +|. +++++|++
T Consensus 5 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~ 41 (264)
T 2dtx_A 5 DLRDKVVIVTGASM---GIGRAIAERFVD-EGS-------KVIDLSIH 41 (264)
T ss_dssp GGTTCEEEEESCSS---HHHHHHHHHHHH-TTC-------EEEEEESS
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEecC
Confidence 36778899999753 333344444443 363 58888775
Done!