Query 010992
Match_columns 496
No_of_seqs 115 out of 177
Neff 2.5
Searched_HMMs 29240
Date Mon Mar 25 18:33:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010992.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010992hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1h3o_B Transcription initiatio 100.0 1.1E-33 3.7E-38 230.4 9.4 75 398-472 2-76 (76)
2 2hue_C Histone H4; mini beta s 99.1 2.9E-10 9.8E-15 92.5 7.3 79 397-477 6-84 (84)
3 1id3_B Histone H4; nucleosome 99.0 6.7E-10 2.3E-14 93.9 7.7 79 396-476 23-101 (102)
4 1tzy_D Histone H4-VI; histone- 98.9 1.5E-09 5.2E-14 91.2 7.5 80 396-477 24-103 (103)
5 2yfw_B Histone H4, H4; cell cy 98.9 2.1E-09 7E-14 90.5 7.1 78 397-476 25-102 (103)
6 1ku5_A HPHA, archaeal histon; 98.8 8.1E-09 2.8E-13 80.8 7.3 64 401-465 6-69 (70)
7 1b67_A Protein (histone HMFA); 98.7 2.9E-08 1E-12 76.8 7.5 65 401-466 2-66 (68)
8 3b0c_W CENP-W, centromere prot 98.7 2.4E-08 8.3E-13 79.6 7.2 71 398-468 1-71 (76)
9 3b0c_T CENP-T, centromere prot 98.7 3.3E-08 1.1E-12 84.6 7.1 72 399-471 5-76 (111)
10 1taf_A TFIID TBP associated fa 98.5 3.2E-07 1.1E-11 73.4 8.2 63 405-468 5-67 (68)
11 1n1j_A NF-YB; histone-like PAI 98.5 4.2E-07 1.4E-11 74.5 8.4 70 397-466 4-74 (93)
12 1f1e_A Histone fold protein; a 98.5 3.9E-07 1.3E-11 82.5 8.7 73 395-468 76-148 (154)
13 2ly8_A Budding yeast chaperone 98.5 2.4E-07 8.3E-12 81.3 6.9 62 415-477 60-121 (121)
14 2l5a_A Histone H3-like centrom 98.3 1.3E-06 4.5E-11 83.9 9.5 75 401-477 153-235 (235)
15 1jfi_B DR1 protein, transcript 98.3 1.3E-06 4.5E-11 80.8 8.5 72 395-466 9-80 (179)
16 3nqj_A Histone H3-like centrom 98.3 1.9E-06 6.6E-11 71.2 7.5 65 401-465 3-73 (82)
17 2hue_B Histone H3; mini beta s 98.2 3E-06 1E-10 69.3 7.6 66 401-466 3-72 (77)
18 3r45_A Histone H3-like centrom 98.2 1.7E-06 5.9E-11 78.9 6.5 70 396-465 72-147 (156)
19 3nqu_A Histone H3-like centrom 98.2 2.4E-06 8.2E-11 76.8 6.6 70 396-465 56-131 (140)
20 2yfv_A Histone H3-like centrom 98.1 3.2E-06 1.1E-10 72.0 6.6 70 396-465 22-98 (100)
21 1tzy_C Histone H3; histone-fol 98.1 5.5E-06 1.9E-10 73.9 8.1 71 396-466 57-131 (136)
22 3b0b_B CENP-S, centromere prot 98.1 2.7E-06 9.3E-11 73.2 5.1 61 407-467 25-87 (107)
23 1taf_B TFIID TBP associated fa 98.1 1.7E-05 6E-10 63.8 8.9 66 399-465 4-69 (70)
24 3v9r_A MHF1, uncharacterized p 98.0 1.1E-05 3.7E-10 67.6 7.5 60 408-467 19-80 (90)
25 1f1e_A Histone fold protein; a 98.0 1.3E-05 4.5E-10 72.6 7.9 66 401-466 4-69 (154)
26 2byk_B Chrac-14; nucleosome sl 98.0 1.3E-05 4.3E-10 70.2 7.5 71 397-467 5-76 (128)
27 4dra_A Centromere protein S; D 97.8 2.7E-05 9.1E-10 67.9 6.3 60 409-468 35-96 (113)
28 1n1j_B NF-YC; histone-like PAI 97.8 4.4E-05 1.5E-09 63.4 7.3 78 395-472 13-90 (97)
29 3vh5_A CENP-S; histone fold, c 97.7 4.6E-05 1.6E-09 68.6 5.8 51 417-467 37-87 (140)
30 2nqb_D Histone H2B; nucleosome 97.6 8.2E-05 2.8E-09 65.8 6.9 63 405-467 37-99 (123)
31 1tzy_B Histone H2B; histone-fo 97.6 0.00012 4E-09 65.1 6.8 63 405-467 40-102 (126)
32 4g92_C HAPE; transcription fac 97.5 0.00028 9.7E-09 60.7 8.4 75 396-470 36-110 (119)
33 3b0b_C CENP-X, centromere prot 97.4 0.00039 1.3E-08 57.4 7.6 69 396-464 3-73 (81)
34 2l5a_A Histone H3-like centrom 97.3 0.00043 1.5E-08 66.7 7.6 82 399-481 9-97 (235)
35 1jfi_A Transcription regulator 97.3 0.00039 1.3E-08 58.0 5.8 74 398-471 8-81 (98)
36 2jss_A Chimera of histone H2B. 97.3 0.00084 2.9E-08 61.8 8.6 64 404-467 6-69 (192)
37 4dra_E Centromere protein X; D 97.0 0.002 6.9E-08 53.6 8.0 67 398-464 9-77 (84)
38 2nqb_C Histone H2A; nucleosome 96.9 0.0022 7.5E-08 56.0 7.4 68 399-466 21-88 (123)
39 2f8n_G Core histone macro-H2A. 96.8 0.0024 8.2E-08 55.6 7.2 68 399-466 20-87 (120)
40 1tzy_A Histone H2A-IV; histone 96.8 0.0028 9.5E-08 55.8 7.3 68 399-466 23-90 (129)
41 1id3_C Histone H2A.1; nucleoso 96.8 0.0023 7.9E-08 56.5 6.6 69 398-466 22-90 (131)
42 2f8n_K Histone H2A type 1; nuc 96.8 0.0027 9.2E-08 57.5 7.1 68 399-466 42-109 (149)
43 1f66_C Histone H2A.Z; nucleoso 96.5 0.0057 2E-07 53.8 7.1 68 399-466 25-93 (128)
44 1bh9_B TAFII28; histone fold, 96.5 0.011 3.9E-07 49.2 8.3 66 401-467 16-82 (89)
45 2byk_A Chrac-16; nucleosome sl 96.3 0.0051 1.7E-07 54.7 5.7 76 397-472 15-91 (140)
46 2jss_A Chimera of histone H2B. 96.2 0.012 4.1E-07 54.1 7.9 68 399-466 103-171 (192)
47 3uk6_A RUVB-like 2; hexameric 93.6 0.23 7.7E-06 46.0 8.4 68 402-469 259-332 (368)
48 3v9r_B MHF2, uncharacterized p 92.2 0.16 5.6E-06 42.9 4.8 61 401-461 1-70 (88)
49 2r44_A Uncharacterized protein 92.0 0.42 1.4E-05 44.0 7.8 73 399-472 207-302 (331)
50 1h3o_A Transcription initiatio 92.0 0.17 5.7E-06 41.6 4.5 49 404-453 9-57 (75)
51 1g8p_A Magnesium-chelatase 38 91.2 0.6 2E-05 42.6 7.8 56 417-472 265-327 (350)
52 3aji_B S6C, proteasome (prosom 90.9 0.11 3.8E-06 40.2 2.3 54 426-484 26-83 (83)
53 2qby_A CDC6 homolog 1, cell di 90.5 1.1 3.8E-05 40.6 8.8 65 402-466 197-271 (386)
54 2v1u_A Cell division control p 89.6 0.5 1.7E-05 43.0 5.8 66 402-467 201-276 (387)
55 3kw6_A 26S protease regulatory 85.9 0.35 1.2E-05 37.0 2.2 45 425-469 27-75 (78)
56 3bos_A Putative DNA replicatio 85.9 1.5 5.1E-05 37.0 6.2 62 403-465 175-241 (242)
57 1fnn_A CDC6P, cell division co 85.7 1.8 6.2E-05 39.6 7.1 66 402-467 193-274 (389)
58 2qby_B CDC6 homolog 3, cell di 85.5 3 0.0001 38.3 8.5 64 402-467 197-270 (384)
59 3ox6_A Calcium-binding protein 85.0 3.7 0.00013 31.8 7.6 75 396-472 22-122 (153)
60 3vlf_B 26S protease regulatory 84.8 0.36 1.2E-05 38.4 1.8 56 426-485 26-86 (88)
61 3h4m_A Proteasome-activating n 84.7 1.1 3.9E-05 39.9 5.1 68 402-469 188-260 (285)
62 1fh1_A NODF, nodulation protei 83.9 0.55 1.9E-05 37.0 2.5 39 448-486 39-80 (92)
63 2ly8_A Budding yeast chaperone 83.9 1.8 6.2E-05 38.1 5.9 50 401-450 1-57 (121)
64 1lv7_A FTSH; alpha/beta domain 83.4 1.2 4E-05 39.6 4.6 65 403-467 183-252 (257)
65 3k1j_A LON protease, ATP-depen 83.1 3.2 0.00011 42.6 8.3 52 416-467 311-375 (604)
66 3nbx_X ATPase RAVA; AAA+ ATPas 82.8 4.5 0.00015 41.5 9.3 62 399-461 206-280 (500)
67 1r6b_X CLPA protein; AAA+, N-t 82.6 3.8 0.00013 42.6 8.7 65 416-480 369-446 (758)
68 2c9o_A RUVB-like 1; hexameric 81.6 2.8 9.6E-05 41.3 7.0 69 402-470 366-440 (456)
69 2qz4_A Paraplegin; AAA+, SPG7, 79.8 1.9 6.5E-05 37.6 4.6 66 402-467 177-249 (262)
70 1w5s_A Origin recognition comp 79.6 5.9 0.0002 36.6 8.1 67 401-467 214-293 (412)
71 2chg_A Replication factor C sm 79.6 2.9 9.8E-05 34.3 5.4 63 401-465 160-224 (226)
72 1ixz_A ATP-dependent metallopr 78.8 1.3 4.5E-05 39.2 3.3 62 403-464 187-253 (254)
73 2lte_A Specialized acyl carrie 79.4 0.45 1.5E-05 39.2 0.0 42 444-486 50-91 (103)
74 1hqc_A RUVB; extended AAA-ATPa 77.3 4.7 0.00016 36.4 6.5 66 401-466 167-237 (324)
75 1elk_A Target of MYB1; superhe 76.8 6.4 0.00022 34.6 7.1 63 401-473 93-156 (157)
76 2krk_A 26S protease regulatory 76.8 1 3.5E-05 36.0 1.8 42 426-467 36-81 (86)
77 1x5b_A Signal transducing adap 76.2 7.5 0.00026 34.5 7.4 69 401-481 91-159 (163)
78 1iy2_A ATP-dependent metallopr 75.6 1.4 4.7E-05 39.9 2.5 62 403-464 211-277 (278)
79 1in4_A RUVB, holliday junction 74.2 5.7 0.00019 37.3 6.4 67 400-466 178-249 (334)
80 2i5u_A DNAD domain protein; st 73.6 14 0.00046 29.3 7.6 56 407-465 4-68 (83)
81 3f9v_A Minichromosome maintena 73.3 1.9 6.6E-05 44.7 3.3 48 419-466 521-586 (595)
82 1bh9_A TAFII18; histone fold, 72.5 12 0.0004 27.8 6.4 41 405-445 4-44 (45)
83 3eie_A Vacuolar protein sortin 72.4 1.4 4.7E-05 41.1 1.8 83 402-488 184-315 (322)
84 2aao_A CDPK, calcium-dependent 70.8 21 0.00071 28.3 8.1 29 438-466 99-127 (166)
85 3pvs_A Replication-associated 70.8 6.4 0.00022 39.5 6.2 66 402-467 165-244 (447)
86 1wwi_A Hypothetical protein TT 70.4 7.9 0.00027 35.3 6.1 59 401-460 2-60 (148)
87 3f8t_A Predicted ATPase involv 69.9 7.8 0.00027 41.0 6.8 68 398-465 390-481 (506)
88 2qp9_X Vacuolar protein sortin 69.2 3.3 0.00011 39.6 3.6 84 402-489 217-349 (355)
89 3k21_A PFCDPK3, calcium-depend 68.8 23 0.00079 29.9 8.4 70 395-466 62-150 (191)
90 1njg_A DNA polymerase III subu 68.8 8.4 0.00029 31.6 5.5 59 402-464 185-248 (250)
91 2kwl_A ACP, acyl carrier prote 68.6 1.5 5E-05 33.3 0.9 28 448-475 37-64 (84)
92 3iot_A Maltose-binding protein 68.1 1.1 3.6E-05 43.1 -0.0 14 319-332 381-394 (449)
93 2i7a_A Calpain 13; calcium-dep 67.6 15 0.00051 31.5 7.1 74 393-467 12-104 (174)
94 2l4b_A Acyl carrier protein; i 67.1 2 6.8E-05 33.0 1.4 30 445-474 36-65 (88)
95 3vfd_A Spastin; ATPase, microt 66.9 4.8 0.00016 38.5 4.2 83 402-488 282-382 (389)
96 1juq_A ADP-ribosylation factor 66.8 13 0.00044 33.3 6.8 67 400-479 88-159 (171)
97 4b4t_K 26S protease regulatory 65.8 5.9 0.0002 40.2 4.8 63 419-484 361-428 (428)
98 3syl_A Protein CBBX; photosynt 65.5 5.8 0.0002 35.6 4.3 66 403-468 205-287 (309)
99 2dhr_A FTSH; AAA+ protein, hex 65.5 2.7 9.2E-05 43.3 2.3 65 403-467 202-271 (499)
100 2pvb_A Protein (parvalbumin); 65.5 13 0.00044 28.2 5.6 65 402-467 6-70 (108)
101 2r62_A Cell division protease 64.7 0.78 2.7E-05 40.7 -1.6 63 404-466 185-252 (268)
102 2dzn_B 26S protease regulatory 64.5 5.9 0.0002 30.7 3.6 45 436-483 37-81 (82)
103 1r4v_A Hypothetical protein AQ 64.3 7.5 0.00026 36.2 4.8 64 396-460 21-84 (171)
104 3pfi_A Holliday junction ATP-d 63.5 6.1 0.00021 36.2 4.1 65 402-466 184-253 (338)
105 1dv5_A APO-DCP, APO-D-alanyl c 62.9 2.1 7.1E-05 32.9 0.7 30 445-474 29-58 (80)
106 1ofh_A ATP-dependent HSL prote 62.4 7.2 0.00025 34.6 4.2 50 418-467 233-299 (310)
107 2mys_C Myosin; muscle protein, 61.8 43 0.0015 25.7 8.1 71 395-466 18-113 (149)
108 2lnk_A Protein S100-A4; EF-han 61.0 38 0.0013 28.1 8.2 48 397-444 35-96 (113)
109 2cgq_A Acyl carrier protein AC 59.7 0.84 2.9E-05 38.7 -2.2 50 423-474 30-79 (113)
110 1rro_A RAT oncomodulin; calciu 59.6 14 0.00047 28.0 4.8 66 401-467 5-70 (108)
111 3fs7_A Parvalbumin, thymic; ca 59.5 13 0.00046 28.1 4.8 65 400-467 5-71 (109)
112 1sxj_D Activator 1 41 kDa subu 59.3 6 0.0002 35.9 3.2 64 402-465 192-261 (353)
113 1rr7_A Middle operon regulator 59.2 11 0.00036 32.6 4.6 55 408-474 12-73 (129)
114 1exr_A Calmodulin; high resolu 59.1 54 0.0019 25.8 8.4 30 440-470 85-114 (148)
115 3e3r_A Calcyphosin, calcyphosi 59.0 8.8 0.0003 31.8 3.9 16 457-472 189-204 (204)
116 1mhq_A ADP-ribosylation factor 58.9 22 0.00075 31.1 6.6 66 401-479 77-145 (148)
117 3dtp_E RLC, myosin regulatory 58.4 32 0.0011 29.0 7.4 74 395-472 67-158 (196)
118 3ncv_A DNA mismatch repair pro 58.2 7 0.00024 36.3 3.5 40 439-479 161-200 (220)
119 3e3r_A Calcyphosin, calcyphosi 58.1 28 0.00095 28.7 6.8 70 395-466 47-137 (204)
120 3fwb_A Cell division control p 58.0 41 0.0014 26.3 7.5 73 395-470 33-127 (161)
121 1k9u_A Polcalcin PHL P 7; poll 57.9 19 0.00064 25.7 5.1 21 395-415 13-33 (78)
122 3gzm_A Acyl carrier protein; h 57.7 2.7 9.3E-05 31.8 0.6 27 448-474 33-59 (81)
123 2keb_A DNA polymerase subunit 57.4 21 0.00071 30.9 6.0 63 398-467 22-91 (101)
124 3kdg_A DNA mismatch repair pro 57.2 9.8 0.00033 34.2 4.2 39 439-478 138-176 (197)
125 1yvi_A Histidine-containing ph 57.2 20 0.00067 30.8 5.9 45 404-448 7-63 (149)
126 4b4t_I 26S protease regulatory 56.6 6.4 0.00022 40.6 3.2 60 408-467 359-423 (437)
127 3us6_A Histidine-containing ph 56.2 19 0.00065 31.5 5.8 49 404-452 7-66 (153)
128 5pal_A Parvalbumin; calcium-bi 55.7 13 0.00043 28.2 4.0 65 400-467 4-70 (109)
129 4b4t_H 26S protease regulatory 55.6 7.1 0.00024 40.6 3.4 60 408-467 386-450 (467)
130 1bu3_A Calcium-binding protein 55.6 19 0.00066 27.2 5.1 65 400-467 5-71 (109)
131 1rwy_A Parvalbumin alpha; EF-h 55.5 15 0.00052 27.7 4.5 66 401-467 5-70 (109)
132 1k94_A Grancalcin; penta-EF-ha 55.3 45 0.0016 26.7 7.5 31 439-470 71-101 (165)
133 1top_A Troponin C; contractIle 55.0 50 0.0017 25.8 7.6 32 437-469 95-126 (162)
134 2qnw_A Acyl carrier protein; m 55.0 3 0.0001 31.5 0.4 26 449-474 36-61 (82)
135 3fi7_A LMO1076 protein; lister 54.9 12 0.00042 34.4 4.5 54 418-472 10-69 (183)
136 3b9p_A CG5977-PA, isoform A; A 54.7 12 0.00042 33.5 4.4 85 403-491 190-292 (297)
137 2dnw_A Acyl carrier protein; A 54.6 1.5 5.3E-05 34.8 -1.3 23 451-473 46-68 (99)
138 2zyc_A Peptidoglycan hydrolase 54.2 7.5 0.00026 35.0 2.9 41 431-472 1-41 (170)
139 1juo_A Sorcin; calcium-binding 54.1 33 0.0011 28.7 6.7 72 395-466 42-131 (198)
140 2lcq_A Putative toxin VAPC6; P 53.9 26 0.00089 30.3 6.2 87 404-492 44-140 (165)
141 2f2o_A Calmodulin fused with c 53.7 71 0.0024 25.7 8.4 27 440-466 86-112 (179)
142 2obh_A Centrin-2; DNA repair c 53.6 55 0.0019 25.9 7.6 33 438-471 79-111 (143)
143 3li6_A Calcium-binding protein 53.4 48 0.0016 22.5 6.4 43 424-466 22-64 (66)
144 2lv7_A Calcium-binding protein 53.3 27 0.00091 27.8 5.7 19 396-414 47-65 (100)
145 4e2i_2 DNA polymerase alpha su 52.9 14 0.00048 30.5 4.1 40 407-446 5-52 (78)
146 2jnf_A Troponin C; stretch act 52.7 58 0.002 25.5 7.6 69 396-466 25-119 (158)
147 2ce7_A Cell division protein F 52.3 7.8 0.00027 39.6 3.0 59 409-467 193-256 (476)
148 2lol_A ACP, acyl carrier prote 52.1 2 6.9E-05 32.1 -0.9 25 450-474 36-60 (81)
149 1pva_A Parvalbumin; calcium bi 52.0 18 0.00063 27.2 4.4 64 401-467 6-71 (110)
150 3pm8_A PFCDPK2, calcium-depend 51.9 37 0.0013 28.8 6.8 72 395-467 67-158 (197)
151 2jq4_A AGR_C_4658P, hypothetic 51.1 1.8 6E-05 35.5 -1.5 24 450-473 53-76 (105)
152 1q80_A SCP, sarcoplasmic calci 50.7 23 0.00078 28.3 5.0 30 438-467 94-123 (174)
153 3nxa_A Protein S100-A16; S100 50.6 43 0.0015 26.8 6.6 49 398-446 27-88 (100)
154 1x3o_A Acyl carrier protein; s 50.5 3.9 0.00013 30.1 0.4 26 449-474 34-59 (80)
155 3mse_B Calcium-dependent prote 50.1 42 0.0015 27.7 6.7 68 395-465 49-135 (180)
156 3n1e_A Vacuolar protein sortin 49.9 35 0.0012 30.5 6.5 70 406-481 63-135 (141)
157 2kyc_A Parvalbumin-3, parvalbu 49.7 19 0.00063 27.2 4.1 65 400-467 4-70 (108)
158 1jfj_A Ehcabp, calcium-binding 49.1 33 0.0011 25.7 5.4 27 440-466 77-103 (134)
159 3ce7_A Specific mitochodrial a 48.9 0.72 2.5E-05 38.1 -4.2 27 448-474 51-77 (107)
160 3d8b_A Fidgetin-like protein 1 48.8 12 0.00043 35.4 3.7 83 403-489 252-352 (357)
161 2chq_A Replication factor C sm 48.7 25 0.00085 31.2 5.4 62 402-465 161-224 (319)
162 3pxi_A Negative regulator of g 48.7 45 0.0016 34.9 8.1 49 402-450 325-388 (758)
163 1gjy_A Sorcin, CP-22, V19; cal 48.3 1E+02 0.0035 24.7 8.6 71 396-466 12-100 (167)
164 1pq4_A Periplasmic binding pro 48.0 6.9 0.00023 37.0 1.7 76 401-476 135-215 (291)
165 4b4t_J 26S protease regulatory 47.9 11 0.00037 38.4 3.3 62 406-467 323-389 (405)
166 3qrx_A Centrin; calcium-bindin 47.1 78 0.0027 25.1 7.6 73 395-470 38-132 (169)
167 2ovk_C Myosin catalytic light 47.0 12 0.00042 29.7 2.9 73 396-470 22-116 (159)
168 3akb_A Putative calcium bindin 46.8 42 0.0014 26.2 5.9 61 407-469 100-163 (166)
169 2ava_A ACP I, acyl carrier pro 46.6 3.6 0.00012 30.9 -0.3 26 450-475 34-59 (82)
170 1sxj_B Activator 1 37 kDa subu 46.6 24 0.00082 31.3 4.9 63 401-465 165-229 (323)
171 3pxg_A Negative regulator of g 46.3 31 0.0011 34.3 6.2 64 402-465 325-404 (468)
172 1alv_A Calpain, S-camld; calci 46.2 63 0.0021 26.2 7.0 28 440-467 79-106 (173)
173 3cjh_B Mitochondrial import in 46.0 76 0.0026 24.2 7.0 48 402-449 5-63 (64)
174 2znd_A Programmed cell death p 46.0 39 0.0013 27.3 5.7 27 440-466 76-102 (172)
175 3k9o_A Ubiquitin-conjugating e 45.8 53 0.0018 29.7 7.1 47 406-452 113-159 (201)
176 2o1e_A YCDH; alpha-beta protei 45.7 8 0.00028 37.1 1.8 75 401-475 135-214 (312)
177 3u0k_A Rcamp; fluorescent prot 45.5 54 0.0019 34.1 8.0 75 395-471 312-407 (440)
178 3i5g_C Myosin catalytic light 45.3 31 0.0011 28.8 5.2 34 396-431 96-129 (159)
179 1tjl_A DNAK suppressor protein 45.3 11 0.00037 33.7 2.5 29 456-496 95-123 (151)
180 2lki_A Putative uncharacterize 45.0 2.1 7.1E-05 35.4 -2.1 29 446-474 52-81 (105)
181 3mfq_A TROA, high-affinity zin 44.8 21 0.00071 33.7 4.5 72 402-473 107-185 (282)
182 1o17_A Anthranilate PRT, anthr 44.2 18 0.0006 35.8 4.0 77 407-483 3-88 (345)
183 2kz2_A Calmodulin, CAM; TR2C, 44.2 34 0.0012 26.1 4.9 63 403-465 27-92 (94)
184 4hw4_A Induced myeloid leukemi 44.0 15 0.00052 32.7 3.2 46 405-453 56-111 (157)
185 1xwi_A SKD1 protein; VPS4B, AA 44.0 16 0.00054 34.4 3.5 48 403-450 180-233 (322)
186 2iie_A Integration HOST factor 43.8 37 0.0013 31.2 5.9 20 462-481 80-99 (204)
187 2pmy_A RAS and EF-hand domain- 43.6 36 0.0012 25.5 4.9 21 447-467 70-90 (91)
188 2lmt_A Calmodulin-related prot 43.2 55 0.0019 26.2 6.2 75 395-471 20-115 (148)
189 4ds7_A Calmodulin, CAM; protei 43.2 84 0.0029 24.0 7.0 72 396-470 22-115 (147)
190 3ejb_A Acyl carrier protein; p 43.0 4.7 0.00016 32.3 -0.2 27 448-474 50-76 (97)
191 2prs_A High-affinity zinc upta 42.9 8.7 0.0003 36.0 1.6 75 401-475 119-198 (284)
192 2kn2_A Calmodulin; S MAPK phos 42.8 57 0.0019 23.8 5.8 27 395-423 19-45 (92)
193 2ehs_A ACP, acyl carrier prote 42.5 4.1 0.00014 29.7 -0.6 24 450-473 31-54 (77)
194 3gi1_A LBP, laminin-binding pr 42.5 7.8 0.00027 36.7 1.2 73 402-474 125-202 (286)
195 3zyq_A Hepatocyte growth facto 42.2 36 0.0012 31.4 5.5 63 401-476 84-147 (226)
196 1l0i_A Acyl carrier protein; a 42.0 4.7 0.00016 29.8 -0.3 24 450-473 33-56 (78)
197 2l2e_A Calcium-binding protein 41.8 64 0.0022 26.3 6.4 70 398-467 39-128 (190)
198 1f80_D Acyl carrier protein; t 41.7 3.4 0.00012 30.9 -1.2 25 450-474 37-61 (81)
199 2kgr_A Intersectin-1; structur 41.5 52 0.0018 26.4 5.8 43 445-487 55-102 (111)
200 2lvv_A Flagellar calcium-bindi 41.5 28 0.00095 30.4 4.5 28 440-467 135-162 (226)
201 3i5g_B Myosin regulatory light 41.4 76 0.0026 26.3 7.0 76 395-472 26-118 (153)
202 1qv0_A Obelin, OBL; photoprote 41.4 43 0.0015 27.2 5.4 23 446-468 157-179 (195)
203 3sjs_A URE3-BP sequence specif 41.4 38 0.0013 29.6 5.3 31 440-471 119-149 (220)
204 1af8_A Actinorhodin polyketide 41.3 16 0.00053 27.7 2.5 33 450-482 38-70 (86)
205 2qac_A Myosin A tail domain in 41.1 71 0.0024 24.8 6.4 72 396-470 25-115 (146)
206 2f33_A Calbindin; EF-hand, Ca2 41.0 53 0.0018 28.0 6.1 88 394-481 112-234 (263)
207 2pwq_A Ubiquitin conjugating e 41.0 31 0.0011 32.1 5.0 48 406-453 128-175 (216)
208 2z4s_A Chromosomal replication 41.0 33 0.0011 33.9 5.5 65 403-468 264-333 (440)
209 2bl0_B Myosin regulatory light 40.4 1.1E+02 0.0038 23.3 7.3 70 395-466 15-104 (145)
210 1ij5_A Plasmodial specific LAV 40.3 76 0.0026 29.9 7.6 75 395-472 198-287 (323)
211 1iqp_A RFCS; clamp loader, ext 39.9 37 0.0013 30.1 5.1 58 402-461 169-228 (327)
212 4b4t_L 26S protease subunit RP 39.9 25 0.00085 35.8 4.4 42 426-467 377-422 (437)
213 3cx3_A Lipoprotein; zinc-bindi 39.8 8.6 0.00029 36.1 1.0 75 401-475 122-201 (284)
214 1zpy_A Hypothetical protein NE 39.5 11 0.00037 32.2 1.5 44 406-449 23-74 (95)
215 1k2h_A S100A1, S-100 protein, 39.5 92 0.0032 22.7 6.5 17 397-413 22-39 (93)
216 2kr5_A PKS, aflatoxin biosynth 39.5 11 0.00036 28.5 1.3 24 451-474 41-64 (89)
217 1qx2_A Vitamin D-dependent cal 39.3 19 0.00066 25.2 2.6 15 400-414 22-36 (76)
218 1q80_A SCP, sarcoplasmic calci 39.2 23 0.00078 28.2 3.3 21 395-415 16-36 (174)
219 1ggw_A Protein (CDC4P); light 39.2 44 0.0015 25.7 4.9 61 405-466 76-139 (140)
220 3hwr_A 2-dehydropantoate 2-red 39.1 20 0.0007 33.5 3.4 10 464-473 290-299 (318)
221 1fi6_A EH domain protein REPS1 39.0 79 0.0027 24.1 6.2 20 395-414 19-38 (92)
222 3q5i_A Protein kinase; CDPK, m 38.9 40 0.0014 32.9 5.6 72 395-466 365-463 (504)
223 2bjv_A PSP operon transcriptio 38.9 38 0.0013 30.0 5.0 39 419-460 208-250 (265)
224 3nnr_A Transcriptional regulat 38.8 5.2 0.00018 33.7 -0.6 35 450-484 173-207 (228)
225 3hvm_A Agmatine deiminase; hyd 38.8 8.2 0.00028 38.5 0.7 40 439-479 153-198 (330)
226 2kw2_A Specialized acyl carrie 38.8 4.8 0.00016 32.4 -0.8 25 450-474 33-57 (101)
227 1msk_A Cobalamin-dependent met 38.7 61 0.0021 32.4 6.9 68 407-478 173-246 (331)
228 2cnr_A FAS, ACP, acyl carrier 38.7 5 0.00017 29.8 -0.6 26 450-475 37-62 (82)
229 2afd_A Protein ASL1650; twiste 38.6 14 0.00048 27.4 1.8 24 450-473 43-66 (88)
230 1s1e_A KV channel interacting 38.6 1.1E+02 0.0039 26.5 7.9 32 437-468 124-155 (224)
231 1avs_A Troponin C; muscle cont 38.5 70 0.0024 23.4 5.7 20 449-468 67-86 (90)
232 2bl0_C Myosin regulatory light 38.5 72 0.0025 24.5 6.0 70 395-466 16-107 (142)
233 3h7c_X Agmatine deiminase; str 38.3 8.3 0.00028 39.2 0.7 40 439-479 175-219 (383)
234 1m45_A MLC1P, myosin light cha 38.1 57 0.002 25.2 5.4 70 395-466 14-111 (148)
235 2ovk_B RLC, myosin regulatory 38.0 80 0.0027 24.7 6.3 70 395-466 26-113 (153)
236 3nso_A Protein S100-A3; EF-han 38.0 1.2E+02 0.0042 24.5 7.5 45 397-441 23-81 (101)
237 1qjt_A EH1, epidermal growth f 37.7 64 0.0022 25.4 5.7 20 395-414 21-40 (99)
238 2qup_A BH1478 protein; structu 37.3 25 0.00085 31.1 3.5 51 403-453 39-94 (145)
239 1pb6_A Hypothetical transcript 37.2 37 0.0013 27.7 4.3 31 446-476 180-210 (212)
240 4b4t_M 26S protease regulatory 37.1 33 0.0011 34.9 4.8 56 409-467 363-422 (434)
241 3cf0_A Transitional endoplasmi 37.0 12 0.00042 34.5 1.5 80 403-486 187-296 (301)
242 3h4s_E KCBP interacting Ca2+-b 36.8 86 0.0029 25.1 6.4 21 395-415 50-70 (135)
243 1c07_A Protein (epidermal grow 36.4 67 0.0023 24.7 5.5 16 445-460 51-66 (95)
244 1jr3_D DNA polymerase III, del 36.3 22 0.00076 32.9 3.2 63 402-467 142-209 (343)
245 1s6i_A CDPK, calcium-dependent 36.3 68 0.0023 27.0 5.9 70 394-465 19-109 (188)
246 2f33_A Calbindin; EF-hand, Ca2 36.0 63 0.0021 27.5 5.7 37 395-431 26-67 (263)
247 3fes_A ATP-dependent CLP endop 35.7 33 0.0011 28.6 3.9 32 436-467 86-117 (145)
248 3e46_A Ubiquitin-conjugating e 35.5 86 0.0029 29.9 7.1 48 406-453 165-212 (253)
249 3htm_A Speckle-type POZ protei 35.5 57 0.002 26.9 5.3 67 402-469 81-148 (172)
250 1sxj_A Activator 1 95 kDa subu 35.3 28 0.00097 34.9 4.0 62 402-465 209-272 (516)
251 1bu3_A Calcium-binding protein 35.2 55 0.0019 24.6 4.7 17 446-462 89-105 (109)
252 3qrx_A Centrin; calcium-bindin 35.1 90 0.0031 24.7 6.2 21 446-466 145-165 (169)
253 2kci_A Putative acyl carrier p 34.8 7.7 0.00026 31.3 -0.2 40 445-484 27-66 (87)
254 1bjf_A Neurocalcin delta; calc 34.7 1E+02 0.0034 25.1 6.6 31 438-468 99-129 (193)
255 1dvp_A HRS, hepatocyte growth 34.6 85 0.0029 28.5 6.7 63 400-475 80-143 (220)
256 1jba_A GCAP-2, protein (guanyl 34.6 1E+02 0.0035 25.6 6.7 69 398-468 36-125 (204)
257 1j8m_F SRP54, signal recogniti 34.5 46 0.0016 31.5 5.1 38 404-441 4-55 (297)
258 2ktg_A Calmodulin, putative; e 34.4 74 0.0025 22.8 5.2 19 450-468 62-80 (85)
259 4h5l_A Nucleoprotein; nucleoca 34.2 71 0.0024 31.3 6.4 86 397-484 13-111 (253)
260 1juo_A Sorcin; calcium-binding 34.1 1.3E+02 0.0043 25.1 7.2 34 395-430 113-147 (198)
261 3ldz_A STAM-1, signal transduc 33.9 62 0.0021 27.8 5.4 18 456-473 100-117 (140)
262 2zc2_A DNAD-like replication p 33.8 42 0.0014 25.7 3.9 32 419-450 17-50 (78)
263 4eto_A Protein S100-A4; calciu 33.7 1.1E+02 0.0039 23.8 6.5 43 400-442 27-82 (93)
264 1wdc_B Scallop myosin; calcium 33.7 1.7E+02 0.0057 23.0 7.5 70 395-466 28-115 (156)
265 3fh2_A Probable ATP-dependent 33.6 38 0.0013 28.3 3.9 32 436-467 86-117 (146)
266 1ls1_A Signal recognition part 33.2 1.3E+02 0.0045 28.2 7.9 18 405-422 7-24 (295)
267 2lhi_A Calmodulin, serine/thre 33.2 95 0.0033 26.2 6.4 74 395-470 21-115 (176)
268 3i83_A 2-dehydropantoate 2-red 33.1 18 0.0006 33.8 1.9 15 437-451 219-233 (320)
269 1exe_A Transcription factor 1; 33.1 1.2E+02 0.0041 24.5 6.7 18 464-481 36-53 (99)
270 1tiz_A Calmodulin-related prot 33.0 23 0.00078 24.1 2.1 55 395-466 11-65 (67)
271 2vof_A BCL-2-related protein A 32.8 18 0.00063 31.8 1.9 30 422-451 70-109 (157)
272 1eh2_A EPS15; calcium binding, 32.6 1.4E+02 0.0047 24.2 7.0 36 445-480 55-94 (106)
273 1r4w_A Glutathione S-transfera 32.6 51 0.0017 29.0 4.7 52 398-453 129-181 (226)
274 2ovk_C Myosin catalytic light 32.4 71 0.0024 25.2 5.1 17 450-466 135-151 (159)
275 2p61_A Hypothetical protein TM 32.4 31 0.0011 31.2 3.3 44 403-446 49-97 (162)
276 2l3v_A ACP, acyl carrier prote 32.3 6.2 0.00021 29.1 -1.0 25 450-474 34-58 (79)
277 3qbr_A SJA, sjchgc06286 protei 32.3 85 0.0029 29.2 6.3 49 407-455 82-141 (179)
278 1l8q_A Chromosomal replication 32.3 18 0.00061 33.2 1.8 55 417-471 183-244 (324)
279 2amw_A Hypothetical protein NE 32.1 5.9 0.0002 30.1 -1.2 25 450-474 34-59 (83)
280 2kua_A BCL-2-like protein 10; 32.1 38 0.0013 30.6 3.9 30 420-449 68-108 (170)
281 3cs1_A Flagellar calcium-bindi 32.0 66 0.0022 27.7 5.3 35 395-430 58-93 (219)
282 2xxa_A Signal recognition part 32.0 70 0.0024 32.1 6.2 39 404-442 6-58 (433)
283 2jq6_A EH domain-containing pr 31.9 97 0.0033 26.9 6.3 77 403-481 49-131 (139)
284 1wlz_A DJBP, CAP-binding prote 31.8 49 0.0017 24.9 3.9 63 405-467 24-89 (105)
285 2f05_A Paired amphipathic heli 31.5 42 0.0014 28.5 3.8 74 407-483 10-99 (105)
286 2hpk_A Photoprotein berovin; s 31.5 68 0.0023 26.8 5.1 27 440-466 130-156 (208)
287 2rcc_A Ribonucleoside-diphosph 31.5 97 0.0033 30.1 6.9 73 405-480 229-301 (346)
288 1sxj_C Activator 1 40 kDa subu 31.5 52 0.0018 30.5 4.8 64 402-465 169-237 (340)
289 2h2k_A Protein S100-A13; calci 31.3 95 0.0033 25.1 5.8 44 400-443 39-92 (106)
290 2kz2_A Calmodulin, CAM; TR2C, 31.3 65 0.0022 24.5 4.6 35 395-431 39-74 (94)
291 1klp_A ACP, ACPM, meromycolate 31.1 6.8 0.00023 32.0 -1.0 12 456-467 69-80 (115)
292 1exr_A Calmodulin; high resolu 31.1 1E+02 0.0036 24.1 5.9 18 397-414 95-112 (148)
293 3khe_A Calmodulin-like domain 31.1 58 0.002 26.4 4.5 68 403-472 121-191 (191)
294 3rpp_A Glutathione S-transfera 31.1 54 0.0018 29.6 4.7 53 397-453 128-181 (234)
295 2vxy_A FTSZ, cell division pro 30.7 32 0.0011 34.8 3.5 73 404-477 148-230 (382)
296 2kax_A Protein S100-A5; EF-han 30.6 1.1E+02 0.0037 23.3 5.7 36 396-431 22-59 (92)
297 2a3q_A Hypothetical protein; M 30.5 1.1E+02 0.0037 27.5 6.6 22 438-462 98-119 (170)
298 1jr3_A DNA polymerase III subu 30.4 42 0.0015 30.6 4.0 60 401-464 177-241 (373)
299 2jjz_A Ionized calcium-binding 30.2 1.4E+02 0.0049 24.4 6.8 27 395-423 60-86 (150)
300 3bhw_A Uncharacterized protein 30.2 45 0.0015 30.7 4.1 75 404-481 57-148 (209)
301 2o2k_A Methionine synthase; C- 30.1 98 0.0034 31.3 6.8 68 406-477 183-256 (355)
302 3fay_A P195, RAS GTPase-activa 29.9 29 0.001 34.3 3.0 18 426-443 178-195 (387)
303 2kbz_A GP15, 15 protein (bacte 29.6 31 0.0011 28.0 2.7 21 420-440 13-33 (99)
304 1squ_A CHEX protein; alpha-bet 29.2 1.2E+02 0.0042 25.2 6.3 43 399-441 57-102 (155)
305 2ao9_A Phage protein; structur 29.1 1.2E+02 0.0042 27.2 6.7 44 421-467 72-119 (155)
306 3dd4_A KV channel-interacting 29.1 1.4E+02 0.0048 25.9 6.9 42 427-468 127-168 (229)
307 3j04_B Myosin regulatory light 28.9 1.4E+02 0.0049 22.8 6.3 71 394-466 16-104 (143)
308 1x5b_A Signal transducing adap 28.8 1.4E+02 0.0049 26.3 7.0 64 403-475 50-130 (163)
309 1wdc_B Scallop myosin; calcium 28.8 64 0.0022 25.4 4.3 16 452-467 136-151 (156)
310 3lij_A Calcium/calmodulin depe 28.8 43 0.0015 32.6 3.9 28 439-466 427-454 (494)
311 3k21_A PFCDPK3, calcium-depend 28.7 1.1E+02 0.0037 25.7 5.9 15 450-464 175-189 (191)
312 1k2h_A S100A1, S-100 protein, 28.7 93 0.0032 22.7 4.9 63 404-466 8-80 (93)
313 1fpw_A Yeast frequenin, calciu 28.7 1.5E+02 0.005 24.0 6.6 27 441-467 102-128 (190)
314 2y5i_A S100Z, S100 calcium bin 28.7 1.4E+02 0.0049 23.3 6.3 46 397-442 23-82 (99)
315 2vzb_A Putative bacterioferrit 28.6 1E+02 0.0035 25.5 5.7 40 406-448 120-159 (170)
316 1toa_A Tromp-1, protein (perip 28.5 16 0.00053 35.2 0.8 74 402-475 141-221 (313)
317 2mys_B Myosin; muscle protein, 28.4 85 0.0029 24.9 5.0 74 395-470 35-126 (166)
318 2bec_A Calcineurin B homologou 28.4 1.1E+02 0.0036 25.5 5.8 34 438-471 114-147 (202)
319 2mys_B Myosin; muscle protein, 28.3 83 0.0028 25.0 4.9 19 449-467 142-160 (166)
320 1dtl_A Cardiac troponin C; hel 28.3 1E+02 0.0035 24.1 5.4 26 441-466 98-123 (161)
321 2bec_A Calcineurin B homologou 28.2 68 0.0023 26.7 4.6 34 434-467 151-184 (202)
322 1avs_A Troponin C; muscle cont 28.2 47 0.0016 24.4 3.2 34 395-430 30-64 (90)
323 3b0c_T CENP-T, centromere prot 28.2 99 0.0034 26.2 5.6 25 443-467 64-88 (111)
324 1s6c_A KV4 potassium channel-i 28.1 1.5E+02 0.0051 23.9 6.5 33 436-468 90-122 (183)
325 3jvo_A GP6; 13-membered ring, 28.1 74 0.0025 26.6 4.8 41 399-442 6-46 (108)
326 3hn2_A 2-dehydropantoate 2-red 28.1 22 0.00074 33.1 1.6 17 435-451 216-232 (312)
327 2z15_A Protein TOB1; human TOB 28.1 10 0.00035 33.4 -0.5 35 436-476 71-106 (130)
328 3i5g_B Myosin regulatory light 27.9 43 0.0015 27.8 3.3 34 395-430 95-128 (153)
329 1k9u_A Polcalcin PHL P 7; poll 27.8 55 0.0019 23.2 3.5 63 404-467 2-67 (78)
330 2bl0_B Myosin regulatory light 27.7 46 0.0016 25.5 3.2 24 445-468 119-142 (145)
331 2ccm_A Calexcitin; EF hand, ca 27.7 2.1E+02 0.0072 23.2 7.4 30 437-466 108-137 (191)
332 2ggz_A Guanylyl cyclase-activa 27.7 78 0.0027 26.8 4.9 23 443-465 140-162 (211)
333 2joj_A Centrin protein; N-term 27.7 40 0.0014 23.6 2.7 21 447-467 52-72 (77)
334 2ffh_A Protein (FFH); SRP54, s 27.6 99 0.0034 31.3 6.4 40 404-443 6-59 (425)
335 2qac_A Myosin A tail domain in 27.6 1.1E+02 0.0037 23.8 5.4 20 395-414 94-113 (146)
336 3rh2_A Hypothetical TETR-like 27.3 24 0.00082 29.2 1.6 33 449-481 166-198 (212)
337 1ny5_A Transcriptional regulat 27.2 99 0.0034 29.9 6.1 46 418-466 337-386 (387)
338 3uv1_A DER F 7 allergen; super 27.2 8.6 0.00029 34.3 -1.2 54 421-477 1-66 (196)
339 1y1x_A Leishmania major homolo 27.1 2.2E+02 0.0077 23.6 7.6 70 395-466 37-121 (191)
340 1j55_A S-100P protein; metal b 27.0 1.1E+02 0.0038 23.6 5.3 42 400-441 26-80 (95)
341 2l9f_A CALE8, meacp; transfera 27.0 20 0.00068 30.7 1.0 30 450-480 44-73 (102)
342 4eoz_A Speckle-type POZ protei 26.8 41 0.0014 27.0 2.9 47 402-448 72-119 (145)
343 3hh8_A Metal ABC transporter s 26.8 18 0.00061 34.4 0.8 74 401-474 126-206 (294)
344 3ojo_A CAP5O; rossmann fold, c 26.7 85 0.0029 31.8 5.7 76 404-479 188-269 (431)
345 3iv7_A Alcohol dehydrogenase I 26.7 29 0.001 34.1 2.3 60 404-469 292-351 (364)
346 1wzv_A Ubiquitin-conjugating e 26.6 84 0.0029 27.1 5.0 45 406-450 109-153 (155)
347 1wlz_A DJBP, CAP-binding prote 26.4 73 0.0025 23.9 4.1 43 423-466 10-52 (105)
348 1k8u_A S100A6, calcyclin, CACY 26.4 1.1E+02 0.0038 22.0 4.9 17 397-413 23-40 (90)
349 1vku_A Acyl carrier protein; T 26.3 7.7 0.00026 31.7 -1.6 24 451-474 47-70 (100)
350 1uhk_A Aequorin 2, aequorin; E 26.2 93 0.0032 25.0 4.9 23 446-468 153-175 (191)
351 2ck3_A ATP synthase subunit al 26.1 38 0.0013 35.6 3.2 31 408-438 477-507 (510)
352 2vaw_A FTSZ, cell division pro 26.0 49 0.0017 33.6 3.9 72 405-477 149-230 (394)
353 2opo_A Polcalcin CHE A 3; calc 26.0 59 0.002 23.5 3.4 21 395-415 21-41 (86)
354 3hqi_A Speckle-type POZ protei 25.7 1.1E+02 0.0038 28.0 5.9 68 402-470 221-289 (312)
355 3bow_A Calpain-2 catalytic sub 25.7 70 0.0024 33.8 5.1 18 453-470 685-702 (714)
356 1xvl_A Mn transporter, MNTC pr 25.6 25 0.00086 33.9 1.6 75 401-475 147-228 (321)
357 3g2s_A C-terminal fragment of 25.5 82 0.0028 27.7 4.8 38 401-438 87-127 (149)
358 1ojl_A Transcriptional regulat 25.4 79 0.0027 29.5 4.9 44 418-464 202-249 (304)
359 2a7w_A PRA-PH, phosphoribosyl- 25.4 79 0.0027 27.6 4.6 41 422-470 55-95 (116)
360 5pal_A Parvalbumin; calcium-bi 25.4 74 0.0025 23.9 4.0 16 450-465 92-107 (109)
361 3j21_S 50S ribosomal protein L 25.3 1.1E+02 0.0038 27.6 5.6 55 401-460 26-112 (155)
362 4fgs_A Probable dehydrogenase 25.2 16 0.00056 34.5 0.2 72 396-468 51-135 (273)
363 3zwh_A Protein S100-A4; Ca-bin 25.2 2E+02 0.007 23.1 6.8 42 400-441 30-84 (104)
364 2ccm_A Calexcitin; EF hand, ca 25.2 1.6E+02 0.0056 23.8 6.3 20 395-414 23-42 (191)
365 3k6c_A Uncharacterized protein 25.2 26 0.00089 29.9 1.5 32 417-448 42-73 (95)
366 1c7v_A CAVP, calcium vector pr 25.1 41 0.0014 24.0 2.3 21 395-415 18-38 (81)
367 2sas_A Sarcoplasmic calcium-bi 25.1 1.3E+02 0.0044 23.9 5.5 21 395-415 19-39 (185)
368 1ggw_A Protein (CDC4P); light 24.9 1.4E+02 0.0048 22.9 5.5 21 445-465 83-103 (140)
369 2kgr_A Intersectin-1; structur 24.7 88 0.003 25.0 4.5 44 395-442 24-77 (111)
370 3pf7_A Benzoyl-COA oxygenase c 24.7 87 0.003 33.2 5.5 54 428-481 243-305 (481)
371 3rm1_A Protein S100-B; alpha-h 24.6 2.3E+02 0.0078 21.4 7.1 43 399-441 25-80 (92)
372 1xk4_A Calgranulin A; S100 fam 24.6 64 0.0022 24.2 3.4 59 395-454 20-92 (93)
373 4dxe_H ACP, acyl carrier prote 24.5 16 0.00054 29.8 0.0 27 448-474 54-80 (101)
374 3pef_A 6-phosphogluconate dehy 24.5 60 0.002 29.5 3.8 57 404-460 144-205 (287)
375 1iq3_A Ralbp1-interacting prot 24.4 33 0.0011 27.8 1.9 15 446-460 64-78 (110)
376 1tiz_A Calmodulin-related prot 24.4 89 0.003 21.0 3.9 10 407-416 3-12 (67)
377 2xb0_X Chromo domain-containin 24.4 87 0.003 30.4 5.1 43 400-442 4-59 (270)
378 4aq3_A Apoptosis regulator BCL 24.1 83 0.0028 28.3 4.6 45 404-451 71-124 (169)
379 1yx7_A Calsensin, LAN3-6 antig 24.0 50 0.0017 23.6 2.7 21 395-415 17-37 (83)
380 3bow_A Calpain-2 catalytic sub 23.9 1.7E+02 0.0056 31.1 7.5 74 397-471 543-637 (714)
381 1m45_A MLC1P, myosin light cha 23.9 56 0.0019 25.3 3.1 19 396-414 94-112 (148)
382 3sg6_A Gcamp2, myosin light ch 23.9 1.8E+02 0.0061 29.9 7.5 69 396-466 323-413 (450)
383 1xk4_C Calgranulin B; S100 fam 23.8 1.9E+02 0.0065 23.0 6.3 19 397-415 25-45 (113)
384 1uhk_A Aequorin 2, aequorin; E 23.8 1E+02 0.0034 24.9 4.7 28 442-470 113-140 (191)
385 3bul_A Methionine synthase; tr 23.8 1.4E+02 0.0048 31.8 6.9 68 407-478 421-494 (579)
386 2opo_A Polcalcin CHE A 3; calc 23.7 63 0.0021 23.3 3.1 65 404-469 10-77 (86)
387 3opb_A SWI5-dependent HO expre 23.7 75 0.0026 35.1 5.0 41 395-435 9-49 (778)
388 1nya_A Calerythrin; EF-hand, m 23.7 2.7E+02 0.0091 21.9 8.3 67 395-467 17-87 (176)
389 3hd5_A Thiol:disulfide interch 23.6 1.2E+02 0.0042 25.5 5.4 50 398-453 101-150 (195)
390 1nya_A Calerythrin; EF-hand, m 23.6 2.7E+02 0.0092 21.9 7.7 58 409-466 62-130 (176)
391 1k6k_A ATP-dependent CLP prote 23.6 68 0.0023 26.1 3.7 32 436-467 84-115 (143)
392 3fia_A Intersectin-1; EH 1 dom 23.6 79 0.0027 27.2 4.2 76 404-481 32-113 (121)
393 2kn2_A Calmodulin; S MAPK phos 23.5 71 0.0024 23.3 3.5 65 404-468 8-75 (92)
394 2r9v_A ATP synthase subunit al 23.5 37 0.0013 35.8 2.5 31 408-438 482-512 (515)
395 1khy_A CLPB protein; alpha hel 23.4 79 0.0027 25.8 4.0 31 436-466 10-40 (148)
396 3rh3_A Uncharacterized DUF3829 23.4 52 0.0018 32.5 3.4 65 407-472 196-263 (264)
397 2hpk_A Photoprotein berovin; s 23.4 1.2E+02 0.0041 25.3 5.2 23 449-471 173-195 (208)
398 1alv_A Calpain, S-camld; calci 23.4 2.1E+02 0.0071 23.1 6.5 10 451-460 125-134 (173)
399 1rwy_A Parvalbumin alpha; EF-h 23.4 87 0.003 23.4 4.0 19 447-465 89-107 (109)
400 2elc_A Trp D, anthranilate pho 23.3 39 0.0013 33.1 2.5 66 418-483 11-87 (329)
401 1ofu_A FTSZ, cell division pro 23.3 49 0.0017 32.3 3.2 72 405-477 149-230 (320)
402 1dgu_A Calcium-saturated CIB; 23.2 91 0.0031 25.4 4.4 63 405-467 98-172 (183)
403 2ehb_A Calcineurin B-like prot 23.2 3.2E+02 0.011 22.6 8.3 76 395-472 47-148 (207)
404 3nyv_A Calmodulin-domain prote 23.2 1.2E+02 0.0043 29.0 5.9 37 430-466 410-446 (484)
405 1qv0_A Obelin, OBL; photoprote 23.2 1.2E+02 0.004 24.6 5.0 25 442-466 117-141 (195)
406 3ujp_A Mn transporter subunit; 23.2 30 0.001 33.3 1.7 73 401-473 133-212 (307)
407 2zfd_A Calcineurin B-like prot 23.1 3.5E+02 0.012 23.1 8.7 76 395-472 58-159 (226)
408 3rio_A PTSGHI operon antitermi 23.1 2.1E+02 0.007 25.2 6.9 14 460-473 150-163 (180)
409 1or5_A Acyl carrier protein; A 23.1 30 0.001 25.9 1.3 24 451-474 37-60 (83)
410 3ll8_B Calcineurin subunit B t 23.0 1.3E+02 0.0043 23.3 4.9 33 438-470 75-107 (155)
411 2y9m_A Ubiquitin-conjugating e 23.0 81 0.0028 27.9 4.3 36 406-441 125-161 (172)
412 3mwu_A Calmodulin-domain prote 22.8 1.1E+02 0.0039 29.5 5.6 72 395-466 341-445 (486)
413 2jul_A Calsenilin; EF-hand, ca 22.7 1.2E+02 0.004 26.8 5.3 45 424-468 151-195 (256)
414 3m6a_A ATP-dependent protease 22.7 54 0.0018 33.4 3.5 50 417-466 280-340 (543)
415 3ksy_A SOS-1, SON of sevenless 22.6 1.7E+02 0.0059 32.6 7.6 69 399-468 102-170 (1049)
416 1rq2_A Cell division protein F 22.6 63 0.0021 32.7 3.9 72 404-477 148-230 (382)
417 3lqh_A Histone-lysine N-methyl 22.6 64 0.0022 29.5 3.6 54 432-486 122-179 (183)
418 1k3x_A Endonuclease VIII; hydr 22.5 84 0.0029 29.7 4.5 10 485-494 235-244 (262)
419 3khe_A Calmodulin-like domain 22.5 2.3E+02 0.0077 22.8 6.6 25 441-465 126-150 (191)
420 1vmg_A Hypothetical protein SS 22.5 1.5E+02 0.005 24.5 5.4 14 438-451 69-82 (95)
421 1abv_A Delta subunit of the F1 22.4 1.6E+02 0.0056 24.0 5.8 33 400-433 49-81 (134)
422 1nq4_A Oxytetracycline polyket 22.3 37 0.0013 26.8 1.7 24 451-474 38-61 (95)
423 3fs7_A Parvalbumin, thymic; ca 22.1 66 0.0022 24.2 3.1 15 450-464 93-107 (109)
424 3zri_A CLPB protein, CLPV; cha 22.0 57 0.0019 28.9 3.1 35 433-467 26-60 (171)
425 1th8_A Anti-sigma F factor; SP 22.0 75 0.0026 25.3 3.5 39 405-443 17-55 (145)
426 2ktg_A Calmodulin, putative; e 21.9 46 0.0016 23.9 2.1 34 395-430 24-58 (85)
427 3akb_A Putative calcium bindin 21.9 2E+02 0.0068 22.3 5.9 19 395-413 14-32 (166)
428 2ovk_B RLC, myosin regulatory 21.9 87 0.003 24.5 3.9 20 395-414 95-114 (153)
429 2liu_A CURA; holo state, trans 21.9 15 0.00052 27.9 -0.6 23 451-473 51-73 (99)
430 1z2u_A Ubiquitin-conjugating e 21.9 1.2E+02 0.0042 25.9 5.1 42 407-448 109-150 (150)
431 1wdc_C Scallop myosin; calcium 21.9 1.9E+02 0.0066 22.5 5.9 18 449-466 133-150 (156)
432 2jul_A Calsenilin; EF-hand, ca 21.8 2.7E+02 0.0092 24.5 7.4 66 404-469 164-244 (256)
433 2v1u_A Cell division control p 21.8 1.6E+02 0.0054 26.6 6.0 37 419-455 287-330 (387)
434 1g8i_A Frequenin, neuronal cal 21.8 1.2E+02 0.0039 24.7 4.7 30 438-467 99-128 (190)
435 2sas_A Sarcoplasmic calcium-bi 21.7 2.7E+02 0.0093 21.9 6.8 58 411-469 66-135 (185)
436 3n22_A Protein S100-A2; EF-han 21.7 2.4E+02 0.0081 22.3 6.4 45 397-441 24-82 (98)
437 1vq8_R 50S ribosomal protein L 21.6 1.6E+02 0.0056 26.5 6.0 52 401-460 23-110 (155)
438 1j1v_A Chromosomal replication 21.5 10 0.00036 31.0 -1.6 48 424-474 3-51 (94)
439 1jat_A Ubiquitin-conjugating e 21.5 74 0.0025 27.5 3.7 45 407-451 110-154 (155)
440 2y1q_A CLPC N-domain, negative 21.5 79 0.0027 25.9 3.7 33 435-467 83-115 (150)
441 1us7_B HSP90 CO-chaperone CDC3 21.4 2E+02 0.0069 28.2 7.0 41 405-448 119-159 (265)
442 3cuq_A Vacuolar-sorting protei 21.4 1.3E+02 0.0043 28.9 5.5 64 404-467 41-127 (234)
443 1f16_A Protein (apoptosis regu 21.3 28 0.00096 31.8 1.0 39 406-449 75-123 (192)
444 3lf9_A 4E10_D0_1IS1A_001_C (T1 21.2 1.3E+02 0.0045 26.7 5.1 33 409-441 65-101 (121)
445 1snl_A Nucleobindin 1, calnuc; 21.2 1.7E+02 0.0058 22.3 5.3 67 395-466 30-100 (103)
446 1gjy_A Sorcin, CP-22, V19; cal 21.2 3.1E+02 0.011 21.9 7.1 19 396-414 83-101 (167)
447 2ju1_A Erythronolide synthase; 21.1 23 0.00078 27.0 0.3 24 451-474 51-74 (95)
448 3agt_A Hemerythrin-like domain 21.0 1.3E+02 0.0044 25.0 4.9 44 405-450 87-130 (136)
449 3vtf_A UDP-glucose 6-dehydroge 21.0 1.2E+02 0.0041 31.1 5.6 74 405-478 203-283 (444)
450 1wer_A P120GAP; GTPase activat 20.9 90 0.0031 30.1 4.4 41 404-444 98-151 (334)
451 2jer_A Agmatine deiminase; hyd 20.8 26 0.00089 35.6 0.7 40 439-479 170-214 (389)
452 2fu2_A Hypothetical protein SP 20.8 57 0.002 27.1 2.7 35 404-438 4-40 (102)
453 2lhi_A Calmodulin, serine/thre 20.7 1.3E+02 0.0045 25.3 5.0 33 395-429 94-127 (176)
454 1um8_A ATP-dependent CLP prote 20.7 55 0.0019 30.8 2.8 28 418-445 304-337 (376)
455 2pfx_A Uncharacterized peroxid 20.6 1.1E+02 0.0038 26.4 4.6 68 403-472 103-175 (191)
456 1vb5_A Translation initiation 20.6 86 0.003 29.8 4.2 27 422-448 75-101 (276)
457 3g33_B CCND3 protein; Ser/Thr 20.5 1.4E+02 0.0048 28.4 5.6 59 404-462 71-140 (306)
458 2f4z_A Tgtwinscan_2721 - E2 do 20.5 1.2E+02 0.004 27.7 4.9 43 406-448 150-192 (193)
459 3fh2_A Probable ATP-dependent 20.4 85 0.0029 26.1 3.7 33 435-467 10-42 (146)
460 1khy_A CLPB protein; alpha hel 20.4 80 0.0027 25.7 3.5 30 436-465 87-116 (148)
461 1jba_A GCAP-2, protein (guanyl 20.3 2.4E+02 0.0083 23.3 6.5 31 436-466 146-176 (204)
462 2hsb_A Hypothetical UPF0332 pr 20.3 2.1E+02 0.0073 22.9 6.0 24 418-441 97-120 (126)
463 1x9z_A DNA mismatch repair pro 20.3 1.2E+02 0.0042 26.7 4.9 42 423-466 107-156 (188)
464 1t5o_A EIF2BD, translation ini 20.2 1.3E+02 0.0044 30.0 5.5 40 407-448 98-138 (351)
465 2l4h_A Calcium and integrin-bi 20.2 3.7E+02 0.013 23.1 7.8 62 405-466 129-202 (214)
466 1i4j_A 50S ribosomal protein L 20.2 2E+02 0.0069 24.2 5.9 52 402-460 12-69 (110)
467 1ais_B TFB TFIIB, protein (tra 20.1 3.2E+02 0.011 23.6 7.5 20 419-438 120-139 (200)
468 1wy9_A Allograft inflammatory 20.1 1.5E+02 0.0052 24.2 5.1 20 395-414 58-77 (147)
469 1is1_A Ribosome recycling fact 20.0 94 0.0032 28.7 4.2 18 424-441 156-173 (185)
470 3r8s_S 50S ribosomal protein L 20.0 2E+02 0.0067 24.2 5.9 44 402-450 12-61 (110)
No 1
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=100.00 E-value=1.1e-33 Score=230.40 Aligned_cols=75 Identities=53% Similarity=0.960 Sum_probs=73.1
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccc
Q 010992 398 GNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL 472 (496)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I 472 (496)
+.+||+|++|++||++||+++.||+||||+|++|||||||+|+++||+||||||+++||+|||+|||||+|||+|
T Consensus 2 s~~vl~k~~L~~Lv~~idp~~~ld~~vee~ll~lADdFV~~V~~~ac~lAKhR~s~~le~kDvql~Ler~wni~i 76 (76)
T 1h3o_B 2 SHMVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWI 76 (76)
T ss_dssp -CCSSCHHHHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECHHHHHHHHHHHTCCCC
T ss_pred CcccccHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccHHHHHHHHHhhcCCcC
Confidence 578999999999999999999999999999999999999999999999999999999999999999999999987
No 2
>2hue_C Histone H4; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Xenopus laevis} SCOP: a.22.1.1 PDB: 3nqj_B 1aoi_B 3kwq_B* 1hio_D 2yfv_B
Probab=99.06 E-value=2.9e-10 Score=92.52 Aligned_cols=79 Identities=24% Similarity=0.313 Sum_probs=72.9
Q ss_pred cCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccCCC
Q 010992 397 FGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFS 476 (496)
Q Consensus 397 ~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFs 476 (496)
+..+.|+|..+.+|+++.+. ..|.+|+.|.|.++.++|++.|+..|+.+|+|.|-.||+..||.+.|+|. |..+.||+
T Consensus 6 ~~~~~ip~~~I~Riar~~Gv-~rIs~da~~~l~~~l~~~~~~I~~dA~~~a~ha~RKTvt~~DV~~Alk~~-g~~lYgf~ 83 (84)
T 2hue_C 6 DNIQGITKPAIRRLARRGGV-KRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ-GRTLYGFG 83 (84)
T ss_dssp GGCCSSCHHHHHHHHHHTTC-CEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTT-CEEEESCC
T ss_pred ccCCCCCHHHHHHHHHHcCc-hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHc-CCCCCCCC
Confidence 45677999999999999854 88999999999999999999999999999999999999999999999998 78899996
Q ss_pred c
Q 010992 477 G 477 (496)
Q Consensus 477 s 477 (496)
+
T Consensus 84 ~ 84 (84)
T 2hue_C 84 G 84 (84)
T ss_dssp -
T ss_pred C
Confidence 3
No 3
>1id3_B Histone H4; nucleosome core particle, chromatin, protein/DNA interaction, nucleoprotein, supercoiled DNA; 3.10A {Saccharomyces cerevisiae} SCOP: a.22.1.1
Probab=99.00 E-value=6.7e-10 Score=93.86 Aligned_cols=79 Identities=23% Similarity=0.313 Sum_probs=72.6
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccCC
Q 010992 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGF 475 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGF 475 (496)
.+..+.|+|..|.+|++++. -..|.+|+.|.|.+++++|+++|+..|+.+|+|-+-.||+..||.+.|+|. +..+.||
T Consensus 23 r~~i~~ip~~~I~Rlar~~G-v~rIS~da~~~l~~~le~fi~~I~~dA~~~a~HakRKTVt~~DV~~ALkr~-g~~lYGf 100 (102)
T 1id3_B 23 RDNIQGITKPAIRRLARRGG-VKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQ-GRTLYGF 100 (102)
T ss_dssp -CCGGGSCHHHHHHHHHHTT-CCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHT-TCCEESS
T ss_pred HhccCCCCHHHHHHHHHHcC-chhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHc-CCCCCCC
Confidence 35566799999999999985 488999999999999999999999999999999999999999999999998 6788899
Q ss_pred C
Q 010992 476 S 476 (496)
Q Consensus 476 s 476 (496)
+
T Consensus 101 ~ 101 (102)
T 1id3_B 101 G 101 (102)
T ss_dssp C
T ss_pred C
Confidence 6
No 4
>1tzy_D Histone H4-VI; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1f66_B 1eqz_D 1hq3_D 1u35_B 2aro_D 2cv5_B* 2f8n_B 3nqu_B 3r45_B 3azg_B 3a6n_B 3an2_B 3av1_B 3av2_B 3ayw_B 3aze_B 3azf_B 3afa_B 3azh_B 3azk_B ...
Probab=98.94 E-value=1.5e-09 Score=91.16 Aligned_cols=80 Identities=24% Similarity=0.311 Sum_probs=72.9
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccCC
Q 010992 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGF 475 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGF 475 (496)
.+..+.|++..|.+|++.... ..|.+|+.|.|.++.++|+++|+..|..+|+|-|-.||+.+||.+.|++. +..+.||
T Consensus 24 r~~~~gip~~~I~Rlar~~G~-~rIs~~a~~~l~~vle~~~~~V~~dA~~~a~hakRktIt~~DV~~Alr~~-g~~lYGf 101 (103)
T 1tzy_D 24 RDNIQGITKPAIRRLARRGGV-KRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ-GRTLYGF 101 (103)
T ss_dssp CCGGGGSCHHHHHHHHHHTTC-CEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHT-TCEEESC
T ss_pred hhhcccCCHHHHHHHHHHcCc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHHc-CCCCcCC
Confidence 344555999999999999866 79999999999999999999999999999999999999999999999998 6788899
Q ss_pred Cc
Q 010992 476 SG 477 (496)
Q Consensus 476 ss 477 (496)
++
T Consensus 102 ~~ 103 (103)
T 1tzy_D 102 GG 103 (103)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 5
>2yfw_B Histone H4, H4; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.60A {Kluyveromyces lactis nrrl y-1140}
Probab=98.90 E-value=2.1e-09 Score=90.50 Aligned_cols=78 Identities=23% Similarity=0.321 Sum_probs=63.8
Q ss_pred cCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccCCC
Q 010992 397 FGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFS 476 (496)
Q Consensus 397 ~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFs 476 (496)
+..+.|++..|.+|++.... ..|.+|+.|.|.++.++|+++|+..|..+|+|-|-.||+.+||.+.|++. |..+-||+
T Consensus 25 ~~~~gip~~~I~Rlar~~G~-~rIs~~a~~~l~~vle~~~~~V~~dA~~~a~hakRktvt~~DV~~Alr~~-g~~lYGf~ 102 (103)
T 2yfw_B 25 DNIQGITKPAIRRLARRGGV-KRISGLIYEEVRNVLKTFLESVIRDAVTYTEHAKRKTVTSLDVVYALKRQ-GRTLYGFG 102 (103)
T ss_dssp -----CCHHHHHHHHHHTTC-CEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHH-C-------
T ss_pred hhhccCCHHHHHHHHHHcCc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHc-CCCCcCCC
Confidence 44555999999999999866 79999999999999999999999999999999999999999999999998 57788986
No 6
>1ku5_A HPHA, archaeal histon; histone fold, DNA binding protein; 2.30A {Pyrococcus horikoshii} SCOP: a.22.1.2
Probab=98.82 E-value=8.1e-09 Score=80.79 Aligned_cols=64 Identities=19% Similarity=0.368 Sum_probs=61.1
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
.|+|..+.+|+|++ +..++++++.+.|.+++++|+++|+..|+.+|+|.|..||+.+||++.++
T Consensus 6 ~lp~a~v~Rl~r~~-g~~ris~~a~~~l~e~~~~~~~~v~~dA~~~a~hakRkTI~~~DV~lA~~ 69 (70)
T 1ku5_A 6 ELPIAPVDRLIRKA-GAERVSEQAAKVLAEYLEEYAIEIAKKAVEFARHAGRKTVKVEDIKLAIK 69 (70)
T ss_dssp CSCHHHHHHHHHHT-TCSEECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHT
T ss_pred cCChHHHHHHHHHc-CcceeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHH
Confidence 58999999999998 46899999999999999999999999999999999999999999999986
No 7
>1b67_A Protein (histone HMFA); DNA binding protein; 1.48A {Methanothermus fervidus} SCOP: a.22.1.2 PDB: 1hta_A 1a7w_A 1b6w_A 1bfm_A
Probab=98.72 E-value=2.9e-08 Score=76.76 Aligned_cols=65 Identities=26% Similarity=0.322 Sum_probs=62.0
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
-|.|..+..||+++ +...+..|+.++|.+.+++||..+++.|..+|+|.|..||..+||++.+++
T Consensus 2 ~lP~a~v~Ri~k~~-~~~ris~~A~~~l~~a~e~fi~~l~~~A~~~a~~~kRkTI~~~Di~~A~~~ 66 (68)
T 1b67_A 2 ELPIAPIGRIIKNA-GAERVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAEDIELARKM 66 (68)
T ss_dssp CSCHHHHHHHHHHT-TCSEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHGGG
T ss_pred CCCccHHHHHHhcC-CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHh
Confidence 37899999999999 678999999999999999999999999999999999999999999999986
No 8
>3b0c_W CENP-W, centromere protein W; histone fold, DNA binding, DNA binding protein; HET: CIT; 2.20A {Gallus gallus} PDB: 3b0d_W* 3vh5_W 3vh6_W
Probab=98.72 E-value=2.4e-08 Score=79.62 Aligned_cols=71 Identities=13% Similarity=0.191 Sum_probs=65.3
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhc
Q 010992 398 GNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (496)
|.+.|.+..+..+++++.++..|..|+.++|.+.+++||+.|...|..+|+|.|..||..+||+..||.-+
T Consensus 1 g~~~LP~A~V~rI~K~~~p~~~is~~A~~~i~~~~~~Fi~~la~eA~~~a~~~~rKTI~~~dI~~A~~~ll 71 (76)
T 3b0c_W 1 GRRTVPRGTLRKIIKKHKPHLRLAANTDLLVHLSFLLFLHRLAEEARTNAFENKSKIIKPEHTIAAAKVIL 71 (76)
T ss_dssp ---CCCHHHHHHHHHHHCTTCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHHHH
T ss_pred CCCcccccHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHH
Confidence 34679999999999999999999999999999999999999999999999999999999999999998754
No 9
>3b0c_T CENP-T, centromere protein T; histone fold, DNA binding, DNA binding protein; HET: CIT; 2.20A {Gallus gallus} PDB: 3b0d_T* 3vh5_T 3vh6_T
Probab=98.67 E-value=3.3e-08 Score=84.64 Aligned_cols=72 Identities=15% Similarity=0.201 Sum_probs=63.4
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCcc
Q 010992 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMT 471 (496)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~ 471 (496)
...|+|..|.+|+++. ...+|.+|+.+.|.+++++|+++|+..|+.+|+|.|.+||+..||.+.|+|+-.+.
T Consensus 5 d~~lP~a~I~Ri~r~~-g~~rIS~~a~~~l~e~l~~f~~~v~~da~~~A~HA~RKTV~~eDV~lalrr~g~~~ 76 (111)
T 3b0c_T 5 EPEIASSLIKQIFSHY-VKTPVTRDAYKIVEKCSERYFKQISSDLEAYSQHAGRKTVEMADVELLMRRQGLVT 76 (111)
T ss_dssp -----CHHHHHHHHHH-HCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHTTSSB
T ss_pred CCCCCHHHHHHHHHHC-CCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHHCCCcc
Confidence 4568999999999998 67899999999999999999999999999999999999999999999999985543
No 10
>1taf_A TFIID TBP associated factor 42; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=98.51 E-value=3.2e-07 Score=73.36 Aligned_cols=63 Identities=19% Similarity=0.331 Sum_probs=57.3
Q ss_pred HHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhc
Q 010992 405 RSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 405 rKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (496)
+.|..|++..+- +.++++|...|+|++.+|+.+|+..|..+|+|.|.++|++.||+|.++...
T Consensus 5 ~~i~~iLk~~G~-~~~~~~v~~~L~e~~~ry~~~il~dA~~~a~HAgrktv~~eDVkLAi~~~~ 67 (68)
T 1taf_A 5 QVIMSILKELNV-QEYEPRVVNQLLEFTFRYVTSILDDAKVYANHARKKTIDLDDVRLATEVTL 67 (68)
T ss_dssp HHHHHHHHHTTC-CCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCC-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHhcc
Confidence 457788888644 799999999999999999999999999999999999999999999998753
No 11
>1n1j_A NF-YB; histone-like PAIR, DNA binding protein; 1.67A {Homo sapiens} SCOP: a.22.1.3
Probab=98.48 E-value=4.2e-07 Score=74.49 Aligned_cols=70 Identities=14% Similarity=0.278 Sum_probs=63.5
Q ss_pred cCCccCCHHHHHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 397 FGNRILTKRSIQELVNQI-DPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 397 ~~nrILtKrKLqELVrqI-DPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+....|.+..+..|+|++ .....+..|+.++|.+.+++||..++..|..+|+|.|..||..+||..+|++
T Consensus 4 ~~d~~LP~a~i~ri~K~~~~~~~~is~dA~~~l~~a~e~Fi~~l~~~A~~~a~~~kRkTI~~~Dv~~Al~~ 74 (93)
T 1n1j_A 4 EQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMST 74 (93)
T ss_dssp ---CCCCHHHHHHHHHHTSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred cccccCChhHHHHHHHHhCCccceeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHH
Confidence 356689999999999999 4468999999999999999999999999999999999999999999999983
No 12
>1f1e_A Histone fold protein; archaeal histone protein, DNA binding protein; HET: MSE; 1.37A {Methanopyrus kandleri} SCOP: a.22.1.2
Probab=98.47 E-value=3.9e-07 Score=82.46 Aligned_cols=73 Identities=11% Similarity=0.249 Sum_probs=68.2
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhc
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (496)
.+.+...|++..+.+|+|+. +.+++..|+.+.|.+++++|++.|+..|+.+|+|-|..||..+||+++|+++.
T Consensus 76 ~d~~~l~lP~a~V~Ri~k~~-g~~RVS~~A~~~l~~~le~f~~~I~~~A~~~a~ha~RKTIt~eDV~~Al~~~~ 148 (154)
T 1f1e_A 76 EDYDGELFGRATVRRILKRA-GIERASSDAVDLYNKLICRATEELGEKAAEYADEDGRKTVQGEDVEKAITYSM 148 (154)
T ss_dssp TTCCSCCCCHHHHHHHHHHT-TCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHS
T ss_pred CccccccCCccHHHHHHHHc-CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhcC
Confidence 34566689999999999998 77899999999999999999999999999999999999999999999999974
No 13
>2ly8_A Budding yeast chaperone SCM3; centromere protein, CENH3 variants, partially unfolded; NMR {Saccharomyces cerevisiae}
Probab=98.46 E-value=2.4e-07 Score=81.30 Aligned_cols=62 Identities=26% Similarity=0.405 Sum_probs=58.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccCCCc
Q 010992 415 DPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSG 477 (496)
Q Consensus 415 DPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFss 477 (496)
.+-++|..++.|.|.++.++|+++|+..|+.+|+|.|.+||++.||.+.|+|. |..+-||++
T Consensus 60 gGvkRIS~~iy~e~r~vl~~~l~~i~rdav~yaehA~RKTVta~DV~~Alkr~-G~~lygf~~ 121 (121)
T 2ly8_A 60 RGSKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQ-GRTLYGFGG 121 (121)
T ss_dssp CCSSCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCHHHHHHHHHHT-TCGGGGCCC
T ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcHHHHHHHHHhC-CCcCCCCCC
Confidence 34578999999999999999999999999999999999999999999999996 779999984
No 14
>2l5a_A Histone H3-like centromeric protein CSE4, protein histone H4; A single chain of CSE4+SCM3+H4, fusion protein; NMR {Saccharomyces cerevisiae}
Probab=98.35 E-value=1.3e-06 Score=83.87 Aligned_cols=75 Identities=21% Similarity=0.384 Sum_probs=67.7
Q ss_pred cCCHHHHHHHHHhhC--------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccc
Q 010992 401 ILTKRSIQELVNQID--------PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL 472 (496)
Q Consensus 401 ILtKrKLqELVrqID--------PsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I 472 (496)
.=-++.|.|++. |+ +-+.|..++.|.|.++.++|+++|+..|+.+|+|.+..||++.||.|.|+|. |..+
T Consensus 153 ~r~~~vLrD~i~-i~~~RlaRrgGVkRIS~~iyeelr~vLe~fle~IirdAv~yaeHA~RKTVta~DV~~ALKr~-gr~l 230 (235)
T 2l5a_A 153 TKYTSVLRDIID-ISDEEDGDKGGVKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQ-GRTL 230 (235)
T ss_dssp STHHHHHHHHHH-HTCCTTSCCTTCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHH-HHHH
T ss_pred hhHHHHHHHhhc-ccHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcHHHHHHHHHhc-CCcc
Confidence 344778888887 75 5679999999999999999999999999999999999999999999999997 5889
Q ss_pred cCCCc
Q 010992 473 PGFSG 477 (496)
Q Consensus 473 PGFss 477 (496)
.||++
T Consensus 231 YGf~~ 235 (235)
T 2l5a_A 231 YGFGG 235 (235)
T ss_dssp TTCCC
T ss_pred ccCCC
Confidence 99974
No 15
>1jfi_B DR1 protein, transcription regulator NC2 beta chain; histone, H2A/H2B, tata-DNA, transcription initiation, NC2, negative cofactor, structural genomics, PSI; 2.62A {Homo sapiens} SCOP: a.22.1.3
Probab=98.32 E-value=1.3e-06 Score=80.80 Aligned_cols=72 Identities=14% Similarity=0.353 Sum_probs=66.5
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
.++....|.+..|..||+++-++.+|.+|+.++|.+++.+||.-|+..|..+|+|.+..||..+||...|++
T Consensus 9 ~~~eD~~LP~A~V~RImK~alp~~rISkDA~~al~ec~~eFI~~LtseA~e~a~~~~RKTI~~eDVl~Al~~ 80 (179)
T 1jfi_B 9 GNDDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALES 80 (179)
T ss_dssp ---CCCCCCHHHHHHHHHHHSTTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred CchhhhhcCHHHHHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHh
Confidence 566778999999999999997789999999999999999999999999999999999999999999999995
No 16
>3nqj_A Histone H3-like centromeric protein A; alpha helix, histone fold, centromere, DNA binding protein; 2.10A {Homo sapiens}
Probab=98.27 E-value=1.9e-06 Score=71.25 Aligned_cols=65 Identities=20% Similarity=0.147 Sum_probs=61.0
Q ss_pred cCCHHHHHHHHHhhC------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 401 ILTKRSIQELVNQID------PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 401 ILtKrKLqELVrqID------PsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
+|.|--+++|||+|. ...++..++.++|.|.+|+|+.++.+.+...|+|.|--||..|||+|+..
T Consensus 3 LI~klPF~RLVREI~~~~~~~~~~R~q~~Al~aLQea~E~ylv~Lfeda~lcAiHAkRvTi~~kDiqLa~r 73 (82)
T 3nqj_A 3 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLARR 73 (82)
T ss_dssp SSCHHHHHHHHHHHHHHHHSSCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHH
T ss_pred CcccccHHHHHHHHHHHhccCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCcHHHHHHHHH
Confidence 678999999999997 46899999999999999999999999999999999999999999999754
No 17
>2hue_B Histone H3; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Xenopus laevis}
Probab=98.22 E-value=3e-06 Score=69.33 Aligned_cols=66 Identities=23% Similarity=0.222 Sum_probs=61.0
Q ss_pred cCCHHHHHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 401 ILTKRSIQELVNQID----PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 401 ILtKrKLqELVrqID----PsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+|.|--+++|||+|. ....+..++.++|.+.+|+|+..+.+.+..+|+|.|.-||..|||+|...-
T Consensus 3 li~k~PF~RLVRei~~~~~~~~R~q~~Al~aLQea~Eaylv~lfeda~l~A~HAkRvTi~~kDiqLa~ri 72 (77)
T 2hue_B 3 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRI 72 (77)
T ss_dssp CSCHHHHHHHHHHHHHTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHcCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCcHhhHHHHHHH
Confidence 688999999999992 468999999999999999999999999999999999999999999998743
No 18
>3r45_A Histone H3-like centromeric protein A; histone fold, centromere, CENP-A, histone chaperone, hjurp; 2.60A {Homo sapiens}
Probab=98.20 E-value=1.7e-06 Score=78.93 Aligned_cols=70 Identities=19% Similarity=0.119 Sum_probs=62.5
Q ss_pred CcCCccCCHHHHHHHHHhhC------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 396 EFGNRILTKRSIQELVNQID------PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqID------PsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
...+-+|.|--++.||++|. .+..+..++.++|.|.+|+|+.++.+.+..+|+|.|--||..|||+|+..
T Consensus 72 kSteLLIpKlPF~RLVREIa~~~~~~~~lRfqs~Al~ALQEAaEayLV~LFEdanLcAiHAkRVTIm~kDIqLArr 147 (156)
T 3r45_A 72 KSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLARR 147 (156)
T ss_dssp ---CCCSCHHHHHHHHHHHHHTTTTTCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEECHHHHHHHHH
T ss_pred cccccccccccHHHHHHHHHHHhccCccceecHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHHHHHH
Confidence 35777899999999999996 35688999999999999999999999999999999999999999999753
No 19
>3nqu_A Histone H3-like centromeric protein A; alpha helix, histone fold, centromere, DNA binding protein; 2.50A {Homo sapiens} PDB: 3an2_A
Probab=98.17 E-value=2.4e-06 Score=76.75 Aligned_cols=70 Identities=19% Similarity=0.119 Sum_probs=63.1
Q ss_pred CcCCccCCHHHHHHHHHhhC------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 396 EFGNRILTKRSIQELVNQID------PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqID------PsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
.+.+-+|.|--++.||++|. .+..+..++.++|.|.+|+|+.++.+.+..+|+|.|--||..|||+|+..
T Consensus 56 kst~LLIpKlPF~RLVREI~~~~~~~~~~Rfq~~Al~ALQEAaEayLv~LFEdanlcAiHAkRVTIm~kDiqLArr 131 (140)
T 3nqu_A 56 KSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLARR 131 (140)
T ss_dssp ---CCCSCTTHHHHHHHHHHHHHHTTCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHH
T ss_pred cccccccccccHHHHHHHHHHHhcccccceecHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHHHHHH
Confidence 46778899999999999996 46899999999999999999999999999999999999999999999764
No 20
>2yfv_A Histone H3-like centromeric protein CSE4; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.32A {Kluyveromyces lactis nrrl y-1140} PDB: 2yfw_A
Probab=98.15 E-value=3.2e-06 Score=72.00 Aligned_cols=70 Identities=17% Similarity=0.193 Sum_probs=59.5
Q ss_pred CcCCccCCHHHHHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 396 EFGNRILTKRSIQELVNQIDP-------SERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqIDP-------sesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
.+.+-+|.|--+..||++|.- ...+..++.++|.|.+|+|+..+.+.+..+|+|.|--||..|||+|+..
T Consensus 22 kst~llIpk~PF~RLVREI~~~~~~~~~~~R~q~~Al~ALQeaaEayLv~Lfeda~l~A~HAkRvTi~~kDiqLa~r 98 (100)
T 2yfv_A 22 RSTDLLISRMPFARLVKEVTDQFTTESEPLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLARR 98 (100)
T ss_dssp ------CCHHHHHHHHHHHHHTTC-----CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHH
T ss_pred ccchhhhccccHHHHHHHHHHHhccccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCHHHHHHHHH
Confidence 356778999999999999962 5789999999999999999999999999999999999999999999863
No 21
>1tzy_C Histone H3; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1eqz_C 1hq3_C 2aro_C 2f8n_A 2hio_C 3av1_A 3lel_A 3afa_A 3azi_A 3azj_A 3azk_A 3azl_A 3azm_A 3azn_A 2cv5_A* 1u35_A* 2nqb_A 2io5_B 2pyo_A* 3c9k_C ...
Probab=98.14 E-value=5.5e-06 Score=73.95 Aligned_cols=71 Identities=21% Similarity=0.185 Sum_probs=65.2
Q ss_pred CcCCccCCHHHHHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 396 EFGNRILTKRSIQELVNQID----PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqID----PsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
.+.+-+|.|--++.||++|. .+..+..++.++|.|.+|+|+..+.+.+..+|+|.|--||..|||+|+..-
T Consensus 57 kst~lLIpk~PF~RLVREI~~~~~~~~R~q~~Al~aLQeaaEayLv~Lfeda~l~A~HAkRvTi~~kDiqLa~ri 131 (136)
T 1tzy_C 57 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 131 (136)
T ss_dssp HCCSCCSCHHHHHHHHHHHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHH
T ss_pred cchhhhhccchHHHHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCcHHhHHHHHHH
Confidence 35778999999999999992 468999999999999999999999999999999999999999999998743
No 22
>3b0b_B CENP-S, centromere protein S; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus}
Probab=98.09 E-value=2.7e-06 Score=73.19 Aligned_cols=61 Identities=15% Similarity=0.148 Sum_probs=54.2
Q ss_pred HHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 407 IQELVNQIDP--SERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 407 LqELVrqIDP--sesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+..+++++.. ++.+.++|...|.+++.+|+++|...+..+|||.|.+||+..||.|.++|+
T Consensus 25 V~rI~~~~g~~~~~~vs~~~i~aL~E~~~~~~~~ia~Da~~fA~HAgRkTI~~eDV~La~Rrn 87 (107)
T 3b0b_B 25 TGCLCQDVAEDKGVLFSKQTVAAISEITFRQCENFARDLEMFARHAKRSTITSEDVKLLARRS 87 (107)
T ss_dssp HHHHHHHHHHHHTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTC
T ss_pred HHHHHHHHhhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCcCCHHHHHHHHHhC
Confidence 3455555533 578999999999999999999999999999999999999999999999996
No 23
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=98.07 E-value=1.7e-05 Score=63.77 Aligned_cols=66 Identities=18% Similarity=0.240 Sum_probs=61.8
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
+-+|++..+.++++.++- +.|.+|+.+.|.+-++..+..|+..|++++||-|..+|...||.+.|+
T Consensus 4 ~s~lp~~~v~~iaes~Gi-~~lsddaa~~LA~dvEyr~~eI~qeA~kfmrHakRk~Lt~~DI~~Alk 69 (70)
T 1taf_B 4 GSSISAESMKVIAESIGV-GSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLK 69 (70)
T ss_dssp SCCCCHHHHHHHHHHTTC-CCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHC
T ss_pred cccCCHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecHHHHHHHHc
Confidence 457899999999999855 799999999999999999999999999999999999999999999885
No 24
>3v9r_A MHF1, uncharacterized protein YOL086W-A; histone fold, fanconi anemia, DNA repair, DNA BI protein; 2.40A {Saccharomyces cerevisiae}
Probab=98.04 E-value=1.1e-05 Score=67.64 Aligned_cols=60 Identities=15% Similarity=0.225 Sum_probs=53.6
Q ss_pred HHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 408 QELVNQIDP--SERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 408 qELVrqIDP--sesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
..++.++.. +..+++++...|.+++.+|+++|...+..+|||-|.+||+..||.|.++||
T Consensus 19 ~ki~~e~~~~~g~~vs~~~i~aL~e~~~~~~~~ia~Dl~~fA~HAgRkTI~~eDV~L~~Rrn 80 (90)
T 3v9r_A 19 EERLQQVLSSEDIKYTPRFINSLLELAYLQLGEMGSDLQAFARHAGRGVVNKSDLMLYLRKQ 80 (90)
T ss_dssp HHHHHHHSCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTC
T ss_pred HHHHHHHHHhcCceeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhC
Confidence 355566533 367999999999999999999999999999999999999999999999997
No 25
>1f1e_A Histone fold protein; archaeal histone protein, DNA binding protein; HET: MSE; 1.37A {Methanopyrus kandleri} SCOP: a.22.1.2
Probab=98.00 E-value=1.3e-05 Score=72.55 Aligned_cols=66 Identities=20% Similarity=0.206 Sum_probs=62.3
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
.|.+..+.+|+|+.=+.+++..|+.|.|.+++++|+..|+..|..+|+|.|..||..+||+..|.+
T Consensus 4 ~LP~a~V~Riik~~lg~~rVS~dA~~~l~~~l~~f~~~i~~~A~~~a~ha~RKTv~a~DV~~a~~~ 69 (154)
T 1f1e_A 4 ELPKAAIERIFRQGIGERRLSQDAKDTIYDFVPTMAEYVANAAKSVLDASGKKTLMEEHLKALADV 69 (154)
T ss_dssp CCCHHHHHHHHHTTSTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHHH
T ss_pred cCCccHHHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHh
Confidence 478999999999985569999999999999999999999999999999999999999999999976
No 26
>2byk_B Chrac-14; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_B
Probab=98.00 E-value=1.3e-05 Score=70.20 Aligned_cols=71 Identities=24% Similarity=0.288 Sum_probs=62.2
Q ss_pred cCCccCCHHHHHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 397 FGNRILTKRSIQELVNQIDP-SERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 397 ~~nrILtKrKLqELVrqIDP-sesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
.....|.+..|..|++++++ ...|..|+.++|.+.++.||..|+..|..+|+|.+..||..+||...|++.
T Consensus 5 ~~d~~LP~A~I~rImK~~~pd~~~iS~dA~~~l~ka~e~FI~~lt~~A~~~a~~~kRKTI~~~Dv~~Al~~l 76 (128)
T 2byk_B 5 IEDLNLPNAVIGRLIKEALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTITAKDILQTLTEL 76 (128)
T ss_dssp ------CCSHHHHHHHHHSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHT
T ss_pred cccccCCHHHHHHHHHHhCcccceECHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHc
Confidence 45678999999999998776 679999999999999999999999999999999999999999999999985
No 27
>4dra_A Centromere protein S; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_A
Probab=97.82 E-value=2.7e-05 Score=67.94 Aligned_cols=60 Identities=13% Similarity=0.154 Sum_probs=52.8
Q ss_pred HHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhc
Q 010992 409 ELVNQID--PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 409 ELVrqID--PsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (496)
.+|++.. -+..+++++...|.+++++|+++|...+..+|||-|.+||+..||+|.++|+=
T Consensus 35 rIvke~gaer~~~vS~~ai~aL~El~~~~~~~ia~Dl~~fAkHAgRkTI~~eDV~La~Rr~~ 96 (113)
T 4dra_A 35 CLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKLLARRSN 96 (113)
T ss_dssp HHHHHHHHHHTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTCH
T ss_pred HHHHHHHHHcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHhCH
Confidence 3444442 25679999999999999999999999999999999999999999999999973
No 28
>1n1j_B NF-YC; histone-like PAIR, DNA binding protein; 1.67A {Homo sapiens} SCOP: a.22.1.3
Probab=97.81 E-value=4.4e-05 Score=63.38 Aligned_cols=78 Identities=14% Similarity=0.242 Sum_probs=64.3
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccc
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL 472 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I 472 (496)
.+.++..|.-.++..+++.-.....+..|+-.+|.+.++.||..+++.|+..|++.|..+|..+||..++++...+.|
T Consensus 13 ~~~~~~~lP~arIkrImK~~~~~~~is~eA~~~laka~E~Fi~~l~~~A~~~a~~~krktI~~~di~~Av~~~e~~~F 90 (97)
T 1n1j_B 13 KDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDF 90 (97)
T ss_dssp -------CCHHHHHHHHTTSTTCCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHTTCGGGGG
T ss_pred CCcCCCcCCHHHHHHHHccCccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCHHHHHHHHhcCcHHHH
Confidence 455677889999999999754447899999999999999999999999999999999999999999999998755544
No 29
>3vh5_A CENP-S; histone fold, chromosome segregation, DNA binding, nucleus, binding protein; 2.40A {Gallus gallus} PDB: 3vh6_A
Probab=97.68 E-value=4.6e-05 Score=68.61 Aligned_cols=51 Identities=16% Similarity=0.156 Sum_probs=49.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 417 SERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 417 sesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+..+++++...|.+++++|+++|...+..+|||-|..||+..||.|.++|+
T Consensus 37 ~~~vS~~ai~aL~El~~~~~e~ia~DLe~FAkHAGRKTI~~eDVkLa~Rrn 87 (140)
T 3vh5_A 37 GVLFSKQTVAAISEITFRQAENFARDLEMFARHAKRSTITSEDVKLLARRS 87 (140)
T ss_dssp TCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHTTS
T ss_pred CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhC
Confidence 568999999999999999999999999999999999999999999999997
No 30
>2nqb_D Histone H2B; nucleosome, NCP, chromatin, structural protein/DNA complex; 2.30A {Drosophila melanogaster} PDB: 2pyo_D*
Probab=97.65 E-value=8.2e-05 Score=65.83 Aligned_cols=63 Identities=19% Similarity=0.287 Sum_probs=59.4
Q ss_pred HHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 405 RSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 405 rKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
.-|..+|++|.+...|..++.++|-.+++|+.|.|...|++||+|.|..||..+||+..++-.
T Consensus 37 ~YIyKVLKQVhpd~gISskAm~ImnSfvnDiferIA~EAs~La~~nkr~TitsreIqtAvrLl 99 (123)
T 2nqb_D 37 IYIYTVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLL 99 (123)
T ss_dssp HHHHHHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCHHHHHHHHHHh
Confidence 458999999999999999999999999999999999999999999999999999999987654
No 31
>1tzy_B Histone H2B; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1eqz_B 1hq3_B 2aro_B 2hio_B 3c9k_B 3azg_D 3a6n_D 3an2_D 3av1_D 3av2_D 3ayw_D 3aze_D 3azf_D 3afa_D 3azh_D 3azi_D 3azj_D 3azk_D 3azl_D 3azm_D ...
Probab=97.57 E-value=0.00012 Score=65.06 Aligned_cols=63 Identities=17% Similarity=0.272 Sum_probs=59.3
Q ss_pred HHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 405 RSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 405 rKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
.-|..+|++|.+...|..++.++|-.+++|+.|.|...|++||+|.|..||..+||+..++-.
T Consensus 40 ~YIyKVLKQVhpd~gISskAm~ImnSfvnDiferIA~EAs~La~~nkr~TitsreIqtAvrLl 102 (126)
T 1tzy_B 40 IYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLL 102 (126)
T ss_dssp HHHHHHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHh
Confidence 348999999999999999999999999999999999999999999999999999999987654
No 32
>4g92_C HAPE; transcription factor, nucleosome, minor groove binding, CCAA complex, histone fold motif, specific binding to the ccaat- nucleus; HET: DNA; 1.80A {Aspergillus nidulans} PDB: 4g91_C*
Probab=97.52 E-value=0.00028 Score=60.74 Aligned_cols=75 Identities=16% Similarity=0.212 Sum_probs=66.4
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCc
Q 010992 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNM 470 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI 470 (496)
+....-|...+|..+++.-.....+..|+-.+|.+.++.||..+++.|...|+.+|..+|..+||..++++.-.+
T Consensus 36 d~k~~~lPvaRIkrImK~d~~~~~is~eA~v~la~a~E~Fi~~L~~~A~~~a~~~krktI~~~di~~Av~~~e~~ 110 (119)
T 4g92_C 36 DYKIHQLPLARIKKVMKADPEVKMISAEAPILFAKGCDVFITELTMRAWIHAEDNKRRTLQRSDIAAALSKSDMF 110 (119)
T ss_dssp CSSCCSSCHHHHHHHHHTSTTCCEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHTTCGGG
T ss_pred ccccCCCCHHHHHHHHhhCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccCHHHHHHHHhcCchh
Confidence 344566999999999997555679999999999999999999999999999999999999999999999885333
No 33
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=97.43 E-value=0.00039 Score=57.35 Aligned_cols=69 Identities=14% Similarity=0.202 Sum_probs=59.8
Q ss_pred CcCCccCCHHHHHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHH
Q 010992 396 EFGNRILTKRSIQELVNQI--DPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHL 464 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqI--DPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhL 464 (496)
|+.+..|.++-|.+|++.. |.+.+|.+|+-+++.++.|-||...+.+|+..||-++.+.||+.|++-++
T Consensus 3 ~~~~~~~~~~lI~ril~~~f~~~ktrI~~dAl~l~aeyl~iFV~EAv~RA~~~a~~e~~~~le~~~LEki~ 73 (81)
T 3b0b_C 3 EEREGGFRKETVERLLRLHFRDGRTRVNGDALLLMAELLKVFVREAAARAARQAQAEDLEKVDIEHVEKVL 73 (81)
T ss_dssp ----CCCCHHHHHHHHHHHCCSTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeecHHHHHHHH
Confidence 4557789999999999987 45789999999999999999999999999999999999999999986554
No 34
>2l5a_A Histone H3-like centromeric protein CSE4, protein histone H4; A single chain of CSE4+SCM3+H4, fusion protein; NMR {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.00043 Score=66.67 Aligned_cols=82 Identities=20% Similarity=0.150 Sum_probs=68.1
Q ss_pred CccCCHHHHHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCcc
Q 010992 399 NRILTKRSIQELVNQIDP-------SERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMT 471 (496)
Q Consensus 399 nrILtKrKLqELVrqIDP-------sesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~ 471 (496)
.-+|.|--+++||++|.- ..++..++..+|.|.+|.|+-.+.+.+...|.|.|--||..|||+|+. |-.|.+
T Consensus 9 ~~lI~KlPFqRLVREIaq~~~~~~~~lRfqs~Al~ALQEAaEayLV~LFEd~nLcaiHAkRVTim~kDiqLar-rirg~~ 87 (235)
T 2l5a_A 9 KLLISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLAR-RIRGQF 87 (235)
T ss_dssp --CCSCCHHHHHHHHHHHTSCGGGTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSGGGTTHHHHHH-TSSCSC
T ss_pred cccccCccHHHHHHHHHHHhccCCccceecHHHHHHHHHHHHHHHHHHHhhhHHHHhcccccccchhhHHHHH-HHhhcc
Confidence 347889999999999932 468999999999999999999999999999999999999999999986 445666
Q ss_pred ccCCCccccc
Q 010992 472 LPGFSGDEIK 481 (496)
Q Consensus 472 IPGFssDEIr 481 (496)
+.++...|.+
T Consensus 88 ~~p~evme~~ 97 (235)
T 2l5a_A 88 LVPRGSMERH 97 (235)
T ss_dssp CCCSSSCHHH
T ss_pred CCchhHHHHH
Confidence 6555554433
No 35
>1jfi_A Transcription regulator NC2 alpha chain; histone, H2A/H2B, tata-DNA, transcription initiation, NC2, negative cofactor, structural genomics, PSI; 2.62A {Homo sapiens} SCOP: a.22.1.3
Probab=97.26 E-value=0.00039 Score=58.02 Aligned_cols=74 Identities=16% Similarity=0.238 Sum_probs=57.3
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCcc
Q 010992 398 GNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMT 471 (496)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~ 471 (496)
.+-.|.-.+|..+++.-+....+..|+--+|...+|-||.++++.|+..|+++|..+|..+||+++++++-.+.
T Consensus 8 ~~~~fPvaRIkrimK~~~~~~~vs~~A~v~la~a~E~Fi~el~~~A~~~a~~~krktI~~~di~~av~~~e~l~ 81 (98)
T 1jfi_A 8 YNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEGDPA 81 (98)
T ss_dssp --CCCCHHHHHHHHTTSTTCCCBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC---CBCHHHHHTTCC------
T ss_pred cCCCCChHHHHHHHHcCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecHHHHHHHHhcCchhh
Confidence 34567788899999974334799999999999999999999999999999999999999999999998864443
No 36
>2jss_A Chimera of histone H2B.1 and histone H2A.Z; histone/chaperone complex, intrinsically unfolded protein, chaperone/structural protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.22.1.1 a.22.1.1
Probab=97.26 E-value=0.00084 Score=61.78 Aligned_cols=64 Identities=22% Similarity=0.287 Sum_probs=59.6
Q ss_pred HHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 404 KRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 404 KrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+--|..++++|.+...|..++.+.|-.|.+|+++.|+..|++|+++.+..||..+||+..++..
T Consensus 6 ~~yi~kvLkqv~p~~~iS~~Am~~m~s~v~di~~rIa~eA~~L~~~~~r~Tit~~eIq~Avrl~ 69 (192)
T 2jss_A 6 SSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLI 69 (192)
T ss_dssp HHHHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcccCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHh
Confidence 3458899999999999999999999999999999999999999999999999999999888754
No 37
>4dra_E Centromere protein X; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_J
Probab=97.04 E-value=0.002 Score=53.62 Aligned_cols=67 Identities=15% Similarity=0.237 Sum_probs=58.9
Q ss_pred CCccCCHHHHHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHH
Q 010992 398 GNRILTKRSIQELVNQI--DPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHL 464 (496)
Q Consensus 398 ~nrILtKrKLqELVrqI--DPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhL 464 (496)
.+..|.++-|.+|++.. |.+.+|.+|+-.++.++.|-||...+.+|+..|+-.+...||+.|++-+|
T Consensus 9 ~~~~i~~~li~ril~~~F~~~kTkIs~dAl~l~aeyl~iFV~EAv~RA~~~a~~e~~~~le~e~LEki~ 77 (84)
T 4dra_E 9 AGSGFRKELVSRLLHLHFKDDKTKVSGDALQLMVELLKVFVVEAAVRGVRQAQAEDALRVDVDQLEKVL 77 (84)
T ss_dssp --CCCCHHHHHHHHHTTCSSTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHH
Confidence 45578899999999965 46789999999999999999999999999999999999999999986554
No 38
>2nqb_C Histone H2A; nucleosome, NCP, chromatin, structural protein/DNA complex; 2.30A {Drosophila melanogaster} PDB: 2pyo_C*
Probab=96.90 E-value=0.0022 Score=56.00 Aligned_cols=68 Identities=12% Similarity=0.190 Sum_probs=62.5
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+-.|.-.+|+.++++-...+++..++-..|..+.|.|+.+|++.|..+|+|.|..+|..+||++.++.
T Consensus 21 gL~fPV~ri~R~Lk~~~~a~RV~~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krItp~hi~lAI~n 88 (123)
T 2nqb_C 21 GLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRN 88 (123)
T ss_dssp TCSSCHHHHHHHHHHTTSCSEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHT
T ss_pred CeeccHHHHHHHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccHHHHHHHHhc
Confidence 34578889999999987778999999999999999999999999999999999999999999998764
No 39
>2f8n_G Core histone macro-H2A.1; nucleosome, NCP, macroh2A, histone variant, chromatin, X- RAY structure, crystallography, structural protein/DNA complex; 2.90A {Homo sapiens} SCOP: a.22.1.1 PDB: 1u35_C
Probab=96.85 E-value=0.0024 Score=55.55 Aligned_cols=68 Identities=13% Similarity=0.231 Sum_probs=62.2
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+-.|.-.++++++++-.-.+++..++-..|..+.|.|+.+|++.|..+|+|.|..+|..+||++.++.
T Consensus 20 gLqfPV~ri~R~Lk~~~~a~RV~~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~~rItp~hi~lAI~n 87 (120)
T 2f8n_G 20 GVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAVNAARDNKKGRVTPRHILLAVAN 87 (120)
T ss_dssp TCSSCHHHHHHHHHHHSSSCEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHT
T ss_pred CccCChHHHHHHHHcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEcHHHHHHHHhc
Confidence 34567788999999987678999999999999999999999999999999999999999999998764
No 40
>1tzy_A Histone H2A-IV; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1eqz_A 1hq3_A 2aro_A 2hio_A 3c9k_A 3azg_C 3a6n_C 3an2_C 3av1_C 3av2_C 3ayw_C 3aze_C 3azf_C 3afa_C 3azh_C 3azi_C 3azj_C 3azk_C 3azl_C 3azm_C ...
Probab=96.80 E-value=0.0028 Score=55.82 Aligned_cols=68 Identities=12% Similarity=0.187 Sum_probs=62.5
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+-.|.-.+|+.++++-...+++..++-..|..+.|.|+.+|++.|..+|+|.+..+|..+||++.++.
T Consensus 23 gLqfPV~rI~R~Lk~~~~a~RVs~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krItp~hi~lAI~n 90 (129)
T 1tzy_A 23 GLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRN 90 (129)
T ss_dssp TCSSCHHHHHHHHHHTTSSSEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHT
T ss_pred ceeccHHHHHHHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHhc
Confidence 44678889999999987778999999999999999999999999999999999999999999997763
No 41
>1id3_C Histone H2A.1; nucleosome core particle, chromatin, protein/DNA interaction, nucleoprotein, supercoiled DNA; 3.10A {Saccharomyces cerevisiae} SCOP: a.22.1.1
Probab=96.77 E-value=0.0023 Score=56.45 Aligned_cols=69 Identities=10% Similarity=0.189 Sum_probs=63.1
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 398 GNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
.+-.|.-.+|++++++-...+++..++-..|..+.|.|+.+|++.|..+|+|.+..+|..+||++.++.
T Consensus 22 agLqfPV~rI~R~Lk~~~~a~RVs~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krItp~hI~lAI~n 90 (131)
T 1id3_C 22 AGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRN 90 (131)
T ss_dssp GTCSSCHHHHHHHHHTTCSCSEECSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHT
T ss_pred CCeecCHHHHHHHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEcHHHHHHHHhc
Confidence 344678899999999976778999999999999999999999999999999999999999999998763
No 42
>2f8n_K Histone H2A type 1; nucleosome, NCP, macroh2A, histone variant, chromatin, X- RAY structure, crystallography, structural protein/DNA complex; 2.90A {Mus musculus} SCOP: a.22.1.1
Probab=96.76 E-value=0.0027 Score=57.46 Aligned_cols=68 Identities=13% Similarity=0.193 Sum_probs=62.5
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+-.|.-.+|.+++++-.-.++|+.++-..|..+.|.|+.+|++.|..+|+|.|..+|..+||++.++.
T Consensus 42 gLqFPVgrI~R~LK~~~~a~RVs~~A~VyLAAVLEYL~aEILelAgn~A~~~krkrItprhI~lAI~n 109 (149)
T 2f8n_K 42 GLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRN 109 (149)
T ss_dssp TCSSCHHHHHHHHHHTTSCSEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHH
T ss_pred CeeccHHHHHHHHHccccccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcHHHHHHHHhc
Confidence 44567889999999987778999999999999999999999999999999999999999999998764
No 43
>1f66_C Histone H2A.Z; nucleosome, chromatin, histone variant, protein DNA interaction, nucleoprotein, supercoiled DNA, complex (nucleosome core/DNA); 2.60A {Homo sapiens} SCOP: a.22.1.1
Probab=96.49 E-value=0.0057 Score=53.77 Aligned_cols=68 Identities=9% Similarity=0.107 Sum_probs=61.1
Q ss_pred CccCCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 399 NRILTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 399 nrILtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+-.|.-.+|++++++-. ..++++.++-..|..+.|.|+.+|++.|...|||.|..+|..+||++.+..
T Consensus 25 gLqfPV~ri~R~Lk~~~~a~~RV~~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krItprhi~lAI~n 93 (128)
T 1f66_C 25 GLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRG 93 (128)
T ss_dssp TCSSCHHHHHHHHHHTSCSSCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHHH
T ss_pred CccCChHHHHHHHHHcccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHhc
Confidence 44577889999999865 346999999999999999999999999999999999999999999998764
No 44
>1bh9_B TAFII28; histone fold, tata binding protein, transcription regulation complex; HET: PMB; 2.60A {Homo sapiens} SCOP: a.22.1.3 PDB: 1bh8_B*
Probab=96.45 E-value=0.011 Score=49.22 Aligned_cols=66 Identities=17% Similarity=0.245 Sum_probs=56.8
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-CCcchhhHHHHHhhh
Q 010992 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKS-DTLEAKDILVHLERN 467 (496)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKS-dTLEvKDVQLhLERn 467 (496)
-|+|+++..|++.|. +..+.++|..+|--||..||-++++.|..+.+.++. .-|..+.|.-.+.|.
T Consensus 16 ~f~k~~vKrl~~~~~-~~~v~~~v~i~v~glaKvfVgelVE~A~~V~~~~~~~~Pl~P~HireA~rrl 82 (89)
T 1bh9_B 16 AFPKAAIKRLIQSIT-GTSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRRL 82 (89)
T ss_dssp CCCHHHHHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHc-CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHH
Confidence 479999999999995 668999999999999999999999999999998864 367777776666653
No 45
>2byk_A Chrac-16; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_A
Probab=96.29 E-value=0.0051 Score=54.74 Aligned_cols=76 Identities=12% Similarity=0.183 Sum_probs=54.2
Q ss_pred cCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh-hhcCCCCcchhhHHHHHhhhcCccc
Q 010992 397 FGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLA-KHRKSDTLEAKDILVHLERNWNMTL 472 (496)
Q Consensus 397 ~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLA-KHRKSdTLEvKDVQLhLERnWNI~I 472 (496)
.....|.-.+|..+++.-.-...|..++-.+|...++.||..++..|+..| +.+|..+|..+||..++++.-.+.|
T Consensus 15 ~~~~~LPlaRIKrIMK~dpdv~~Is~eA~vliakA~ElFI~~Lt~~A~~~a~~~~kRKtI~~~Dl~~AV~~~e~~dF 91 (140)
T 2byk_A 15 TAETFLPLSRVRTIMKSSMDTGLITNEVLFLMTKCTELFVRHLAGAAYTEEFGQRPGEALKYEHLSQVVNKNKNLEF 91 (140)
T ss_dssp --------------CCSSSSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCEECHHHHHHHHHTCSTTGG
T ss_pred ccCCCCCHHHHHHHHhcCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCHHHHHHHHhcCchhhh
Confidence 455677888888888864344689999999999999999999999999999 9999999999999999997644433
No 46
>2jss_A Chimera of histone H2B.1 and histone H2A.Z; histone/chaperone complex, intrinsically unfolded protein, chaperone/structural protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.22.1.1 a.22.1.1
Probab=96.21 E-value=0.012 Score=54.13 Aligned_cols=68 Identities=10% Similarity=0.155 Sum_probs=61.4
Q ss_pred CccCCHHHHHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 399 NRILTKRSIQELVNQIDP-SERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 399 nrILtKrKLqELVrqIDP-sesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+-.|.-.++++++++-.. .++++.++-..|..+.|.|+.+|++.|..+|||.|..+|..+||++.+..
T Consensus 103 gl~fPv~ri~R~lk~~~~a~~Rv~~~A~vyLaavLEyl~~eIlelA~n~a~~~~~~~I~p~~i~lAi~n 171 (192)
T 2jss_A 103 GLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRG 171 (192)
T ss_dssp SCCSCHHHHHHHHHHTTCSSCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHhcCccccccccChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHhc
Confidence 446788899999998744 47999999999999999999999999999999999999999999998764
No 47
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=93.63 E-value=0.23 Score=45.96 Aligned_cols=68 Identities=10% Similarity=0.188 Sum_probs=55.9
Q ss_pred CCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcC
Q 010992 402 LTKRSIQELVNQID--PSERLDPDVEDILVDIAED----FVESITMFGCSLAKHRKSDTLEAKDILVHLERNWN 469 (496)
Q Consensus 402 LtKrKLqELVrqID--PsesLDpDVEELLLeIADD----FVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWN 469 (496)
+++..+.++++..- .+..+++++.+.|.++++. .+.+++..++.+|..++.+.|+.+||.-.|+...+
T Consensus 259 ~~~~e~~~il~~~~~~~~~~~~~~~l~~l~~~~~~G~~r~~~~ll~~a~~~A~~~~~~~It~~~v~~a~~~~~~ 332 (368)
T 3uk6_A 259 YSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLD 332 (368)
T ss_dssp CCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHSBC
T ss_pred CCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHhcC
Confidence 46777777777542 3467999999999999984 77889999999999999999999999988886444
No 48
>3v9r_B MHF2, uncharacterized protein YDL160C-A; histone fold, fanconi anemia, DNA repair, DNA BI protein; 2.40A {Saccharomyces cerevisiae}
Probab=92.18 E-value=0.16 Score=42.93 Aligned_cols=61 Identities=13% Similarity=0.237 Sum_probs=45.9
Q ss_pred cCCHHHHHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-------CCcchhhHH
Q 010992 401 ILTKRSIQELVNQI--DPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKS-------DTLEAKDIL 461 (496)
Q Consensus 401 ILtKrKLqELVrqI--DPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKS-------dTLEvKDVQ 461 (496)
.|.|.-|.+|+..- +.+.+|..|+-+++.++.|-||...+-+|..-.+--+. -+|++.|+.
T Consensus 1 ~ip~~llaRIL~~~F~~~kTrIt~da~~lv~kY~diFVrEAv~Rs~e~ke~~~~~~~~~~d~~LeveDLE 70 (88)
T 3v9r_B 1 MLSKEALIKILSQNEGGNDMKIADEVVPMIQKYLDIFIDEAVLRSLQSHKDINGERGDKSPLELSHQDLE 70 (88)
T ss_dssp CCCSHHHHHHHTTTSCSSCCEECTTTHHHHHHHHHHHHHHHHHHHHHHHHCC-----------CCHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCCceecHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCeeehHHHH
Confidence 36777788888754 56779999999999999999999999999655444223 278888874
No 49
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=92.03 E-value=0.42 Score=44.00 Aligned_cols=73 Identities=15% Similarity=0.210 Sum_probs=55.4
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHHHHHhhhhcCCCCc
Q 010992 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDF-----------------------VESITMFGCSLAKHRKSDTL 455 (496)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDF-----------------------VDsVvt~ACrLAKHRKSdTL 455 (496)
..++..+.|.++.+.+ .+..+++++.+.|.+++.+. ...++..+..+|+.++.+.|
T Consensus 207 ~~~~~~~~i~~~~~~~-~~v~~~~~~~~~i~~~~~~~r~~~~~~~~~~~~~~~~~~s~R~~~~ll~~a~a~A~l~g~~~v 285 (331)
T 2r44_A 207 QKIVSKNDVLEIRNEI-NKVTISESLEKYIIELVFATRFPAEYGLEAEASYILYGASTRAAINLNRVAKAMAFFNNRDYV 285 (331)
T ss_dssp CCCSCHHHHHHHHHHH-HTCBCCHHHHHHHHHHHHHHHSGGGGTCHHHHHHEEECCCHHHHHHHHHHHHHHHHHTTCSBC
T ss_pred cccCCHHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHhccccccccccccccccCcChhHHHHHHHHHHHHHHHcCCCCC
Confidence 4566777777766554 46789999999999988543 34567777888999999999
Q ss_pred chhhHHHHHhhhcCccc
Q 010992 456 EAKDILVHLERNWNMTL 472 (496)
Q Consensus 456 EvKDVQLhLERnWNI~I 472 (496)
+..||+-.++.-+..++
T Consensus 286 ~~~dv~~~~~~vl~~r~ 302 (331)
T 2r44_A 286 LPEDIKEVAYDILNHRI 302 (331)
T ss_dssp CHHHHHHHHHHHHTTTS
T ss_pred CHHHHHHHHHHHhHhhc
Confidence 99999888877665444
No 50
>1h3o_A Transcription initiation factor TFIID 135 kDa subunit; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=91.95 E-value=0.17 Score=41.56 Aligned_cols=49 Identities=16% Similarity=0.221 Sum_probs=34.1
Q ss_pred HHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 010992 404 KRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSD 453 (496)
Q Consensus 404 KrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSd 453 (496)
++||.++.++ .+-..+.+||+++|---+++-+.++++.-+.+|+||...
T Consensus 9 qkri~~I~~k-~gl~~~~~dv~~~iS~a~qeRLr~llekl~~~a~~R~~~ 57 (75)
T 1h3o_A 9 QRRILEIGKK-HGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFS 57 (75)
T ss_dssp HHHHHHHHHT-TTCCEECTTHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHh-cCCCcCChhHHHHhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3556666665 345678999999999999999999999999999999876
No 51
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=91.22 E-value=0.6 Score=42.58 Aligned_cols=56 Identities=5% Similarity=-0.142 Sum_probs=46.7
Q ss_pred CCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccc
Q 010992 417 SERLDPDVEDILVDIAED-------FVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL 472 (496)
Q Consensus 417 sesLDpDVEELLLeIADD-------FVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I 472 (496)
...|++++.++|.+++.. -+.+++..|+.+|+.++.++|+.+||...++..+.-++
T Consensus 265 ~~~ls~~~~~~l~~~~~~~~~~~~R~~~~ll~~a~~~A~~~~~~~v~~~~v~~a~~~~l~~r~ 327 (350)
T 1g8p_A 265 KVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRL 327 (350)
T ss_dssp GCBCCHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHHHTTCSBCCHHHHHHHHHHHHGGGC
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHHHHhhcc
Confidence 458999999999999875 57889999999999999999999999877776554443
No 52
>3aji_B S6C, proteasome (prosome, macropain) 26S subunit, ATPA; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dwz_B* 2dvw_B*
Probab=90.88 E-value=0.11 Score=40.18 Aligned_cols=54 Identities=17% Similarity=0.116 Sum_probs=34.3
Q ss_pred HHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccCCCcccccccC
Q 010992 426 DILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGDEIKTFR 484 (496)
Q Consensus 426 ELLLeIADDF----VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssDEIr~~r 484 (496)
+.|.+.++.| |..++..|+..|-.|+...|+.+|+.-.|++. .|+.. ++++-|+
T Consensus 26 ~~la~~t~G~SGADi~~l~~eA~~~a~~~~~~~i~~~df~~Al~~~----~ps~~-~~l~~y~ 83 (83)
T 3aji_B 26 EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTV----IKKDE-QEHEFYK 83 (83)
T ss_dssp HHHHTSSCCCCHHHHHHHHHHHHHGGGTSCCSSBCHHHHHHHHHHH----CC-----------
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHhccCCcCHHHHHHHHHHH----ccCch-HHHHhcC
Confidence 3444444433 77899999999999999999999999888874 57767 7777664
No 53
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=90.51 E-value=1.1 Score=40.64 Aligned_cols=65 Identities=9% Similarity=0.135 Sum_probs=51.0
Q ss_pred CCHHHHHHHHHhh----CCCCCCCHHHHHHHHHHHH------HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 402 LTKRSIQELVNQI----DPSERLDPDVEDILVDIAE------DFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 402 LtKrKLqELVrqI----DPsesLDpDVEELLLeIAD------DFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+++..+.++++.. .....+++++.+.|.++++ .++.+++..++.+|..++...|+.+||.-.+++
T Consensus 197 l~~~~~~~il~~~~~~~~~~~~~~~~~~~~l~~~~~~~~G~~r~~~~ll~~a~~~a~~~~~~~i~~~~v~~a~~~ 271 (386)
T 2qby_A 197 YNAEELEDILTKRAQMAFKPGVLPDNVIKLCAALAAREHGDARRALDLLRVSGEIAERMKDTKVKEEYVYMAKEE 271 (386)
T ss_dssp CCHHHHHHHHHHHHHHHBCSSCSCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHH
Confidence 4677777777653 2346899999999999998 345678999999999888888999999865554
No 54
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=89.55 E-value=0.5 Score=43.05 Aligned_cols=66 Identities=14% Similarity=0.234 Sum_probs=53.5
Q ss_pred CCHHHHHHHHHhhC----CCCCCCHHHHHHHHHHHH------HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 402 LTKRSIQELVNQID----PSERLDPDVEDILVDIAE------DFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 402 LtKrKLqELVrqID----PsesLDpDVEELLLeIAD------DFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+++..+.++++..- ....+++++.+.|.++++ .++.+++..++.+|..++.+.|+.+||.-.+++.
T Consensus 201 l~~~~~~~il~~~~~~~~~~~~~~~~~~~~l~~~~~~~~G~~r~~~~~l~~a~~~a~~~~~~~i~~~~v~~a~~~~ 276 (387)
T 2v1u_A 201 YTAPQLRDILETRAEEAFNPGVLDPDVVPLCAALAAREHGDARRALDLLRVAGEIAERRREERVRREHVYSARAEI 276 (387)
T ss_dssp CCHHHHHHHHHHHHHHHBCTTTBCSSHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHTTCSCBCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHH
Confidence 46777887776541 346899999999999998 5677999999999998888999999998777654
No 55
>3kw6_A 26S protease regulatory subunit 8; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Homo sapiens}
Probab=85.95 E-value=0.35 Score=37.04 Aligned_cols=45 Identities=7% Similarity=0.069 Sum_probs=38.2
Q ss_pred HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcC
Q 010992 425 EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERNWN 469 (496)
Q Consensus 425 EELLLeIADDF----VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWN 469 (496)
.+.|.+.++.| |..|+..|+..|-.|+...|+.+|+.-.|++..+
T Consensus 27 l~~la~~t~G~SGADi~~l~~eA~~~a~~~~~~~i~~~d~~~Al~~v~~ 75 (78)
T 3kw6_A 27 LRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 75 (78)
T ss_dssp HHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHh
Confidence 35566677777 8999999999999999999999999999998643
No 56
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=85.90 E-value=1.5 Score=37.03 Aligned_cols=62 Identities=10% Similarity=-0.051 Sum_probs=43.6
Q ss_pred CHHHHHHHHHhh--CCCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 403 TKRSIQELVNQI--DPSERLDPDVEDILVDIAE---DFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 403 tKrKLqELVrqI--DPsesLDpDVEELLLeIAD---DFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
+.+.+.++++.+ ..+..+++++.+.|.+.++ .-+.++++.+|.+|...+. .|+.+||.-+|+
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~r~l~~~l~~~~~~a~~~~~-~It~~~v~~~l~ 241 (242)
T 3bos_A 175 MDDEKLAALQRRAAMRGLQLPEDVGRFLLNRMARDLRTLFDVLDRLDKASMVHQR-KLTIPFVKEMLR 241 (242)
T ss_dssp CGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTC-CCCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHhh
Confidence 334444444443 1245799999999998876 3566788888888876664 589999987775
No 57
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=85.72 E-value=1.8 Score=39.63 Aligned_cols=66 Identities=14% Similarity=0.185 Sum_probs=52.0
Q ss_pred CCHHHHHHHHHhhC----CCCCCCHHHHHHHHHHH---------H---HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 402 LTKRSIQELVNQID----PSERLDPDVEDILVDIA---------E---DFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 402 LtKrKLqELVrqID----PsesLDpDVEELLLeIA---------D---DFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
+++..+.++++..- ....+++++.+.|.+++ + .++.+++..++.+|..++.+.|+.+||...++
T Consensus 193 l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~G~~r~~~~~l~~a~~~a~~~~~~~i~~~~v~~~~~ 272 (389)
T 1fnn_A 193 YTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSK 272 (389)
T ss_dssp CBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTCTTSCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhcccCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcCHHHHHHHHH
Confidence 45667777776542 23479999999999999 2 34788999999999999999999999987777
Q ss_pred hh
Q 010992 466 RN 467 (496)
Q Consensus 466 Rn 467 (496)
..
T Consensus 273 ~~ 274 (389)
T 1fnn_A 273 EV 274 (389)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 58
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=85.49 E-value=3 Score=38.35 Aligned_cols=64 Identities=6% Similarity=0.088 Sum_probs=49.7
Q ss_pred CCHHHHHHHHHhh----CCCCCCCHHHHHHHHHHHH---H---HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 402 LTKRSIQELVNQI----DPSERLDPDVEDILVDIAE---D---FVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 402 LtKrKLqELVrqI----DPsesLDpDVEELLLeIAD---D---FVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+++..+.++++.. -....+++++.+.|.++++ - .+.+++..++.+|. +...|+.+||.-.|++.
T Consensus 197 l~~~~~~~il~~~~~~~~~~~~~~~~~~~~i~~~~~~~~G~~r~a~~~l~~a~~~a~--~~~~i~~~~v~~~~~~~ 270 (384)
T 2qby_B 197 YDAEQLKFILSKYAEYGLIKGTYDDEILSYIAAISAKEHGDARKAVNLLFRAAQLAS--GGGIIRKEHVDKAIVDY 270 (384)
T ss_dssp CCHHHHHHHHHHHHHHTSCTTSCCSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTT--SSSCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhcccCCcCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhc--CCCccCHHHHHHHHHHH
Confidence 4778888888764 1346799999999999987 2 45678888888888 66788999998777654
No 59
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=85.00 E-value=3.7 Score=31.81 Aligned_cols=75 Identities=8% Similarity=0.061 Sum_probs=45.8
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHHH---------HHHHHHHH----------------HHHHHHhhhh
Q 010992 396 EFGNRILTKRSIQELVNQIDPSERLDPD-VEDILVDI---------AEDFVESI----------------TMFGCSLAKH 449 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLeI---------ADDFVDsV----------------vt~ACrLAKH 449 (496)
.+++..|++..|..+++.++- .++.+ +++++..+ .++|+.-+ +..++++.-.
T Consensus 22 ~d~~G~i~~~el~~~l~~~~~--~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~ 99 (153)
T 3ox6_A 22 KDKDGYINCRDLGNCMRTMGY--MPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDT 99 (153)
T ss_dssp HHCSSSCCHHHHHHHHHHTTC--CCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHHHHHCT
T ss_pred CCCCCcCcHHHHHHHHHHcCC--CCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHHHHHHHhCC
Confidence 345667777778777777643 23333 33333332 34565443 4555666655
Q ss_pred cCCCCcchhhHHHHHhhhcCccc
Q 010992 450 RKSDTLEAKDILVHLERNWNMTL 472 (496)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~I 472 (496)
.+...|+..++.-.|...+|..+
T Consensus 100 d~~G~i~~~el~~~l~~~~~~~~ 122 (153)
T 3ox6_A 100 NGDGEISTSELREAMRALLGHQV 122 (153)
T ss_dssp TCSSSBCHHHHHHHHHHHHSSCC
T ss_pred CCCCcCcHHHHHHHHHHHhcCCC
Confidence 67778999999888887566544
No 60
>3vlf_B 26S protease regulatory subunit 7 homolog; heat repeat, chaperone, chaperone-protein binding complex; HET: DNA; 3.80A {Saccharomyces cerevisiae} PDB: 4a3v_B*
Probab=84.84 E-value=0.36 Score=38.39 Aligned_cols=56 Identities=11% Similarity=0.252 Sum_probs=37.2
Q ss_pred HHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccCCCcc-cccccCC
Q 010992 426 DILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGD-EIKTFRK 485 (496)
Q Consensus 426 ELLLeIADDF----VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssD-EIr~~rk 485 (496)
+.|.+..+.| |..||..|+..|-+|+...|+.+|+.-.|++. ++|.... .+..|.+
T Consensus 26 ~~lA~~t~G~SGADl~~l~~eAa~~a~r~~~~~i~~~df~~Al~~v----~~~~~~~~~~~~y~~ 86 (88)
T 3vlf_B 26 ELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKV----ISGYKKFSSTSRYMQ 86 (88)
T ss_dssp HHHHHTCSSCCHHHHHHHHHHHHHHHHHHSCSSBCHHHHHHHHHHH----TC-------------
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHH----hcCcccccchhHHhc
Confidence 4556666667 89999999999999999999999999999885 4555432 3444443
No 61
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=84.67 E-value=1.1 Score=39.90 Aligned_cols=68 Identities=13% Similarity=0.082 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHhhCCCCCCCHH-HHHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcC
Q 010992 402 LTKRSIQELVNQIDPSERLDPD-VEDILVDIAED----FVESITMFGCSLAKHRKSDTLEAKDILVHLERNWN 469 (496)
Q Consensus 402 LtKrKLqELVrqIDPsesLDpD-VEELLLeIADD----FVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWN 469 (496)
.+.+...++++..-....++.+ ..+.|.++++. -|+.++..|+..|..++.+.|+.+||.-+|++...
T Consensus 188 p~~~~r~~il~~~~~~~~~~~~~~~~~l~~~~~g~~~~~i~~l~~~a~~~a~~~~~~~I~~~d~~~al~~~~~ 260 (285)
T 3h4m_A 188 PDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIME 260 (285)
T ss_dssp CCHHHHHHHHHHHHTTSCBCTTCCHHHHHHHCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCCcCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccCcCCHHHHHHHHHHHHh
Confidence 4666677777766544444333 23445555544 47789999999999999999999999999987643
No 62
>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1
Probab=83.94 E-value=0.55 Score=37.03 Aligned_cols=39 Identities=15% Similarity=0.215 Sum_probs=15.2
Q ss_pred hhcCCCCcchhhHHHHHhhhcCcccc---CCCcccccccCCc
Q 010992 448 KHRKSDTLEAKDILVHLERNWNMTLP---GFSGDEIKTFRKP 486 (496)
Q Consensus 448 KHRKSdTLEvKDVQLhLERnWNI~IP---GFssDEIr~~rk~ 486 (496)
..-|-+.|++-+|...||+.||+.|+ -....++++++..
T Consensus 39 ~dlg~DSl~~vel~~~lE~~fgi~i~~~~~~~~~~~~Tv~~l 80 (92)
T 1fh1_A 39 TSLGIDSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDV 80 (92)
T ss_dssp -------CTTTTHHHHHHHC-----------------CTTTS
T ss_pred hhcCCChHHHHHHHHHHHHHhCCccCCccHhHHhhcCCHHHH
Confidence 34567889999999999999999998 4444555555543
No 63
>2ly8_A Budding yeast chaperone SCM3; centromere protein, CENH3 variants, partially unfolded; NMR {Saccharomyces cerevisiae}
Probab=83.91 E-value=1.8 Score=38.08 Aligned_cols=50 Identities=18% Similarity=0.221 Sum_probs=43.6
Q ss_pred cCCHHHHHHHHHhhC----C---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 010992 401 ILTKRSIQELVNQID----P---SERLDPDVEDILVDIAEDFVESITMFGCSLAKHR 450 (496)
Q Consensus 401 ILtKrKLqELVrqID----P---sesLDpDVEELLLeIADDFVDsVvt~ACrLAKHR 450 (496)
+|.|--+++|||+|. . ..++..++..+|.|.+|+|+-...+.+-..|.|.
T Consensus 1 LI~klPF~RLVREI~~~~~~~~~~lRfq~~Al~ALQeAsEayLV~lFEd~nlcaiHA 57 (121)
T 2ly8_A 1 LISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHL 57 (121)
T ss_dssp CCSCCHHHHHHHHHHHHHTTCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHHHHHHHHHHHHHhHHHHcC
Confidence 467778899999882 2 5689999999999999999999999999999986
No 64
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=83.41 E-value=1.2 Score=39.59 Aligned_cols=65 Identities=9% Similarity=0.088 Sum_probs=44.3
Q ss_pred CHHHHHHHHHhhCCCCCCCHHH-HHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 403 TKRSIQELVNQIDPSERLDPDV-EDILVDIAED----FVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 403 tKrKLqELVrqIDPsesLDpDV-EELLLeIADD----FVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+.+...++++..-....+++++ .++|.+..+. -|++++..|+.+|..++.+.|+.+|+.-.+++.
T Consensus 183 ~~~~r~~il~~~~~~~~l~~~~~~~~la~~~~G~~~~dl~~l~~~a~~~a~~~~~~~i~~~~~~~a~~~~ 252 (257)
T 1lv7_A 183 DVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKI 252 (257)
T ss_dssp CHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCccccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHH
Confidence 4444455665554444555554 3344333333 467899999999999999999999999888874
No 65
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=83.08 E-value=3.2 Score=42.63 Aligned_cols=52 Identities=12% Similarity=0.144 Sum_probs=44.0
Q ss_pred CCCCCCHHHHHHHHHHHH-------------HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 416 PSERLDPDVEDILVDIAE-------------DFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 416 PsesLDpDVEELLLeIAD-------------DFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
....|++++.+.|++.+. ..+.+++..|+.+|+.++.+.|+.+||.-.+++.
T Consensus 311 ~~~~ls~eAl~~Li~~~~r~~g~r~~l~~~~R~l~~llr~A~~~A~~~~~~~I~~edv~~A~~~~ 375 (604)
T 3k1j_A 311 KIPHFTKEAVEEIVREAQKRAGRKGHLTLRLRDLGGIVRAAGDIAVKKGKKYVEREDVIEAVKMA 375 (604)
T ss_dssp SSCCBBHHHHHHHHHHHHHTTCSTTEEECCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHT
T ss_pred CcccCCHHHHHHHHHHHhhhhccccccccCHHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHhh
Confidence 345799999999988763 4678899999999999999999999998888663
No 66
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=82.81 E-value=4.5 Score=41.54 Aligned_cols=62 Identities=10% Similarity=0.071 Sum_probs=53.3
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhcCCCCcchhhHH
Q 010992 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAED-------------FVESITMFGCSLAKHRKSDTLEAKDIL 461 (496)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADD-------------FVDsVvt~ACrLAKHRKSdTLEvKDVQ 461 (496)
..+++.+.|.++.+.+. ...++++|.|++.+++.+ ....++..|..+|+.++.+.|+..||.
T Consensus 206 ~~~~~~e~l~~~~~~~~-~v~v~d~v~e~i~~l~~~lr~~r~~~~iS~R~~~~llr~A~A~A~l~gr~~Vt~eDv~ 280 (500)
T 3nbx_X 206 ALQVTDEEYERWQKEIG-EITLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVDLI 280 (500)
T ss_dssp TTSBCHHHHHHHHHHHT-TCBCCHHHHHHHHHHHHHHHHCSSSCCCCHHHHHHHHHHHHHHHHHTTCSBCCGGGGG
T ss_pred cceecHHHHHHHHhcCC-cccCchHHHHHHHHHHHHhhcCCCCCccchhHHHHHHHHHHHHHhhcCCccccchHHH
Confidence 56788999999888874 478999999999999853 455688899999999999999999998
No 67
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=82.57 E-value=3.8 Score=42.58 Aligned_cols=65 Identities=14% Similarity=0.125 Sum_probs=50.9
Q ss_pred CCCCCCHHHHHHHHHHHHHH---------HHHHHHHHHHhhhh----cCCCCcchhhHHHHHhhhcCccccCCCcccc
Q 010992 416 PSERLDPDVEDILVDIAEDF---------VESITMFGCSLAKH----RKSDTLEAKDILVHLERNWNMTLPGFSGDEI 480 (496)
Q Consensus 416 PsesLDpDVEELLLeIADDF---------VDsVvt~ACrLAKH----RKSdTLEvKDVQLhLERnWNI~IPGFssDEI 480 (496)
....+++++.+.+.++++.| +.+++..+|..++. .+...|+.+||.-++++..++.+..+..+|+
T Consensus 369 ~~v~~~~~al~~~~~~s~~~i~~~~lp~~~i~lld~a~~~~~~~~~~~~~~~v~~~di~~~~~~~~~ip~~~~~~~~~ 446 (758)
T 1r6b_X 369 HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDR 446 (758)
T ss_dssp HTCCCCHHHHHHHHHHHHHHCTTSCTTHHHHHHHHHHHHHHHHSSSCCCCCSCCHHHHHHHHHHHSCCCCCCSSSSHH
T ss_pred cCCCCCHHHHHHHHHHhhhhcccccCchHHHHHHHHHHHHHhcccccccCCccCHHHHHHHHHHhcCCCccccchhHH
Confidence 35679999999999999886 44678888888776 3456789999999999887777766665554
No 68
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=81.60 E-value=2.8 Score=41.33 Aligned_cols=69 Identities=13% Similarity=0.173 Sum_probs=55.3
Q ss_pred CCHHHHHHHHHhhCC--CCCCCHHHHHHHHHHH-H---HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCc
Q 010992 402 LTKRSIQELVNQIDP--SERLDPDVEDILVDIA-E---DFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNM 470 (496)
Q Consensus 402 LtKrKLqELVrqIDP--sesLDpDVEELLLeIA-D---DFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI 470 (496)
+++..|.++++.+.. +..+++++.++|.+++ + ....++++.|..+|..++.+.|+.+||.-.++.-+|.
T Consensus 366 ~~~~e~~~iL~~~~~~~~~~~~~~~~~~i~~~a~~g~~r~a~~ll~~a~~~A~~~~~~~v~~~~v~~~~~~~~d~ 440 (456)
T 2c9o_A 366 YTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDA 440 (456)
T ss_dssp CCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHHHSCHHHHHHTHHHHHHHHHHTTCSSBCHHHHHHHHHHSCCH
T ss_pred CCHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHccCCCHHHHHHHHHHHHHHHhhcCCCccCHHHHHHHHHHhcCh
Confidence 477788888876532 3569999999999998 4 2566788888899999999999999999888876554
No 69
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=79.78 E-value=1.9 Score=37.62 Aligned_cols=66 Identities=12% Similarity=0.060 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHhhCC--CCCCCHHH-HHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 402 LTKRSIQELVNQIDP--SERLDPDV-EDILVDIAED----FVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 402 LtKrKLqELVrqIDP--sesLDpDV-EELLLeIADD----FVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
.+.+...+|++.+-. ...++.++ .+.|.+..+. -|+.++..|+..|..++...|+.+|+...|++.
T Consensus 177 p~~~~r~~il~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~l~~l~~~a~~~a~~~~~~~i~~~d~~~a~~~~ 249 (262)
T 2qz4_A 177 PTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERV 249 (262)
T ss_dssp CCHHHHHHHHHHHHHHTTCCBTHHHHHHHHHHTCTTCCHHHHHHHHHHHHTC--------CCBCCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCCcchhhHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHh
Confidence 344445555544322 22334433 2445444333 477889999999999999999999999988874
No 70
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=79.65 E-value=5.9 Score=36.64 Aligned_cols=67 Identities=13% Similarity=0.193 Sum_probs=52.8
Q ss_pred cCCHHHHHHHHHhh----CCCCCCCHHHHHHHHHHHH---------HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 401 ILTKRSIQELVNQI----DPSERLDPDVEDILVDIAE---------DFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 401 ILtKrKLqELVrqI----DPsesLDpDVEELLLeIAD---------DFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
-|+.+.+.+|++.. .....+++++.+.|.++++ -++..++..++.+|..++...++.+||.-.+++.
T Consensus 214 ~l~~~e~~~ll~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~G~p~~~~~l~~~a~~~a~~~~~~~i~~~~v~~~~~~~ 293 (412)
T 1w5s_A 214 AYKSRELYTILEQRAELGLRDTVWEPRHLELISDVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVSEN 293 (412)
T ss_dssp CCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHHHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 35677788877532 2334689999999999998 3788999999999998888889899987777654
No 71
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=79.64 E-value=2.9 Score=34.28 Aligned_cols=63 Identities=13% Similarity=0.061 Sum_probs=43.5
Q ss_pred cCCHHHHHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 401 ILTKRSIQELVNQIDP--SERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 401 ILtKrKLqELVrqIDP--sesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
-+++..+.++++++-. +..+++++.+.|.+.++--+..++...++++... +.|+.+||.-.+.
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~r~l~~~l~~~~~~~--~~I~~~~v~~~~~ 224 (226)
T 2chg_A 160 PVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIG--EVVDADTIYQITA 224 (226)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTTCHHHHHHHHHHHHHTC--SCBCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--ceecHHHHHHHhc
Confidence 3567777777776532 3468999999888888766665555555555443 6899999987764
No 72
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=78.79 E-value=1.3 Score=39.17 Aligned_cols=62 Identities=16% Similarity=0.191 Sum_probs=41.5
Q ss_pred CHHHHHHHHHhhCCCCCCCHHH-HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHH
Q 010992 403 TKRSIQELVNQIDPSERLDPDV-EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHL 464 (496)
Q Consensus 403 tKrKLqELVrqIDPsesLDpDV-EELLLeIADDF----VDsVvt~ACrLAKHRKSdTLEvKDVQLhL 464 (496)
..+...++++.......+++|+ .+.|.+..+.| |++++..|+.+|..++...|+.+|+.-.|
T Consensus 187 ~~~~r~~il~~~~~~~~~~~~~~~~~la~~~~G~~~~dl~~~~~~a~~~a~~~~~~~I~~~dl~~a~ 253 (254)
T 1ixz_A 187 DVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAA 253 (254)
T ss_dssp CHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCCCCCcccCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHh
Confidence 3444445555544445566554 45555554433 67899999999998888889999987654
No 73
>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}
Probab=79.43 E-value=0.45 Score=39.16 Aligned_cols=42 Identities=14% Similarity=0.173 Sum_probs=30.8
Q ss_pred HHhhhhcCCCCcchhhHHHHHhhhcCccccCCCcccccccCCc
Q 010992 444 CSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGDEIKTFRKP 486 (496)
Q Consensus 444 CrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssDEIr~~rk~ 486 (496)
..| .--+-|.|++-+|...||++||+.||-.--+++++++..
T Consensus 50 ~~l-~dLGlDSL~~veL~~~lE~~fgi~i~~~~l~~~~TV~~l 91 (103)
T 2lte_A 50 SRM-EDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDEL 91 (103)
Confidence 344 444778899999999999999999986554555555443
No 74
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=77.29 E-value=4.7 Score=36.36 Aligned_cols=66 Identities=9% Similarity=0.010 Sum_probs=50.1
Q ss_pred cCCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 401 ILTKRSIQELVNQID--PSERLDPDVEDILVDIAE---DFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 401 ILtKrKLqELVrqID--PsesLDpDVEELLLeIAD---DFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
.++.+.+.++++++. -+..+++++.+.|.+.++ .++.+++..++.+|..++.+.|+..|+...++.
T Consensus 167 ~~~~~e~~~~l~~~~~~~~~~~~~~~~~~l~~~~~G~~r~l~~~l~~~~~~a~~~~~~~i~~~~~~~~~~~ 237 (324)
T 1hqc_A 167 YYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAA 237 (324)
T ss_dssp CCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHSCSCHHHHHHHHHHHTTTSTTTSCSCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 346677777777663 245799999998888763 356678888888898888888999998777765
No 75
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=76.79 E-value=6.4 Score=34.62 Aligned_cols=63 Identities=17% Similarity=0.369 Sum_probs=40.3
Q ss_pred cCCHHHHHH-HHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCcccc
Q 010992 401 ILTKRSIQE-LVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLP 473 (496)
Q Consensus 401 ILtKrKLqE-LVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IP 473 (496)
|-+|+-|++ |++-|.+....+.+|.+-+|+|...|-+.. |+ ..+--.+.|+--.|++. |+.||
T Consensus 93 va~~~fl~e~Lvk~~~~k~~~~~~Vk~kil~li~~W~~~f--------~~-~p~l~~i~~~Y~~Lk~~-G~~FP 156 (157)
T 1elk_A 93 VASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWADAF--------RS-SPDLTGVVTIYEDLRRK-GLEFP 156 (157)
T ss_dssp HTSHHHHHHHTHHHHSTTTCCCHHHHHHHHHHHHHHHHHH--------TT-CTTCHHHHHHHHHHHHH-TCCCC
T ss_pred HhhHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHHHc--------CC-CcchHHHHHHHHHHHHc-CCCCC
Confidence 456777778 778776665566778877777777776642 11 11111367776677776 77776
No 76
>2krk_A 26S protease regulatory subunit 8; structural genomics, northeast structural genomics consortium (NESG), target HR3102A, PSI-2; NMR {Homo sapiens}
Probab=76.76 E-value=1 Score=35.98 Aligned_cols=42 Identities=7% Similarity=0.098 Sum_probs=33.6
Q ss_pred HHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 426 DILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 426 ELLLeIADDF----VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+.|.+.++.| |+.||..|+..|-.|....|+.+|+.-.|++.
T Consensus 36 ~~LA~~T~G~SGADL~~l~~eAa~~alr~~~~~I~~~df~~Al~~v 81 (86)
T 2krk_A 36 RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 81 (86)
T ss_dssp HHHHHTCSSCCHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 4455555555 67899999999999988999999999999874
No 77
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=76.23 E-value=7.5 Score=34.54 Aligned_cols=69 Identities=13% Similarity=0.204 Sum_probs=47.3
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccCCCcccc
Q 010992 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGDEI 480 (496)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssDEI 480 (496)
|-+|+-|++|++-+++ +.+++|.+-+|+|...|-+.. .++. +--.++|+--.|+++ |+.||....+..
T Consensus 91 vas~~Fl~el~~l~~~--~~~~~Vk~kil~li~~W~~~f-------~~~~--~l~~i~~~Y~~Lk~~-G~~FP~~~~~~~ 158 (163)
T 1x5b_A 91 VCSRDFATEVRAVIKN--KAHPKVCEKLKSLMVEWSEEF-------QKDP--QFSLISATIKSMKEE-GITFPPAGSQTS 158 (163)
T ss_dssp HTSHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHHT-------TTCS--TTHHHHHHHHHHHTT-TCCCCCCSSCCC
T ss_pred HhhHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHh-------cCCc--ccHHHHHHHHHHHHc-CCCCCCCCCCCC
Confidence 4468888888887763 467888888888888776642 1222 111367887778887 899998876554
Q ss_pred c
Q 010992 481 K 481 (496)
Q Consensus 481 r 481 (496)
.
T Consensus 159 ~ 159 (163)
T 1x5b_A 159 G 159 (163)
T ss_dssp C
T ss_pred C
Confidence 3
No 78
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=75.61 E-value=1.4 Score=39.90 Aligned_cols=62 Identities=16% Similarity=0.191 Sum_probs=41.3
Q ss_pred CHHHHHHHHHhhCCCCCCCHHH-HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHH
Q 010992 403 TKRSIQELVNQIDPSERLDPDV-EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHL 464 (496)
Q Consensus 403 tKrKLqELVrqIDPsesLDpDV-EELLLeIADDF----VDsVvt~ACrLAKHRKSdTLEvKDVQLhL 464 (496)
..+...++++.......+++|+ .++|.+..+.| |++++..|+.+|..++.+.|+.+||.-.|
T Consensus 211 ~~~~r~~il~~~~~~~~~~~~~~~~~la~~~~G~~~~dl~~l~~~a~~~a~~~~~~~I~~~dl~~a~ 277 (278)
T 1iy2_A 211 DVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAA 277 (278)
T ss_dssp CHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCCSBCHHHHHHHT
T ss_pred CHHHHHHHHHHHHccCCCCcccCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCcCHHHHHHHh
Confidence 4444455555554445566555 44444444433 67889999999998888899999997655
No 79
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=74.22 E-value=5.7 Score=37.35 Aligned_cols=67 Identities=10% Similarity=0.195 Sum_probs=48.1
Q ss_pred ccCCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 400 RILTKRSIQELVNQID--PSERLDPDVEDILVDIAE---DFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 400 rILtKrKLqELVrqID--PsesLDpDVEELLLeIAD---DFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
...++..|.++|+++. -+..+|+|+.+.|.+.++ ..+++++..+..+|..++...|+.++|.-.|++
T Consensus 178 d~~~~~~l~~iL~~~~~~~~~~~~~~~~~~ia~~~~G~~R~a~~ll~~~~~~a~~~~~~~It~~~v~~al~~ 249 (334)
T 1in4_A 178 DFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEV 249 (334)
T ss_dssp CCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCCCcCHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHH
Confidence 4457777888887653 245788988777766543 245566777777777777778999999888887
No 80
>2i5u_A DNAD domain protein; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG, U function; HET: MSE; 1.50A {Enterococcus faecalis} SCOP: a.275.1.1
Probab=73.63 E-value=14 Score=29.32 Aligned_cols=56 Identities=13% Similarity=0.077 Sum_probs=39.8
Q ss_pred HHHHHHhhCCCCCCCHHHHHHHHHHHHHH---------HHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 407 IQELVNQIDPSERLDPDVEDILVDIAEDF---------VESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 407 LqELVrqIDPsesLDpDVEELLLeIADDF---------VDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
|-++..+..-+ .|.+-..+.|.+..||| -.++|..||+.|..++.. ..+=|.-+|+
T Consensus 4 ~~~~~e~~g~g-~ls~~e~e~i~~w~~~~~~~~~~~~~~~elI~~A~~~av~~~~~--~~~Yi~~IL~ 68 (83)
T 2i5u_A 4 IRSIWENNGFG-LMSSKTMTDFDYWISDFEKIGASQKEAEQLIVKAIEIAIDANAR--NYNYINAILK 68 (83)
T ss_dssp HHHHHHTTTSC-SCCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTCC--SHHHHHHHHH
T ss_pred HHHHHHHhCCC-CCCHHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHcCCC--CHHHHHHHHH
Confidence 44555544334 78888888888989988 789999999999877544 4544444443
No 81
>3f9v_A Minichromosome maintenance protein MCM; replicative helicase, DNA replication, MCM complex, AAA+ Pro ATP-binding, DNA-binding, helicase; 4.35A {Sulfolobus solfataricus}
Probab=73.30 E-value=1.9 Score=44.72 Aligned_cols=48 Identities=10% Similarity=0.203 Sum_probs=40.9
Q ss_pred CCCHHHHHHHHHHHHH------------------HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 419 RLDPDVEDILVDIAED------------------FVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 419 sLDpDVEELLLeIADD------------------FVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
.|++++.++|.++..+ -+++++..|..+||.|+++.|+.+||.-+++-
T Consensus 521 ~ls~ea~~~l~~~y~~lR~~~~~~~~~~~~~s~R~l~~lirla~a~A~l~~~~~V~~~dv~~Ai~l 586 (595)
T 3f9v_A 521 KITSEAKNLITDFFVEMRKKSSETPDSPILITPRQLEALIRISEAYAKMALKAEVTREDAERAINI 586 (595)
T ss_dssp CCCCCTHHHHHHHHTTSSCSCCBCSSSCBCSSTTTTTHHHHHHHHHHHTTSSCCSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhccCCCccccccHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHH
Confidence 7888999998887654 26789999999999999999999999877653
No 82
>1bh9_A TAFII18; histone fold, tata binding protein, transcription regulation complex; HET: PMB; 2.60A {Homo sapiens} SCOP: a.22.1.3 PDB: 1bh8_A*
Probab=72.52 E-value=12 Score=27.77 Aligned_cols=41 Identities=17% Similarity=0.284 Sum_probs=35.9
Q ss_pred HHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 010992 405 RSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCS 445 (496)
Q Consensus 405 rKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACr 445 (496)
+.|+.|+--.+-...-.+|..++|=||.-+||.+++..|++
T Consensus 4 ~ei~~mMy~fGD~~~P~~ETv~llEeiV~~~i~~l~~~A~~ 44 (45)
T 1bh9_A 4 KELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAMS 44 (45)
T ss_dssp HHHHHHHHHTTSCSSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44888888887777788889999999999999999999986
No 83
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=72.44 E-value=1.4 Score=41.08 Aligned_cols=83 Identities=12% Similarity=0.084 Sum_probs=55.3
Q ss_pred CCHHHHHHHHHhhCC--CCCCCHHHHHHHHHHHHHH----HHHHHHHHHHhhhhcCC-----------------------
Q 010992 402 LTKRSIQELVNQIDP--SERLDPDVEDILVDIAEDF----VESITMFGCSLAKHRKS----------------------- 452 (496)
Q Consensus 402 LtKrKLqELVrqIDP--sesLDpDVEELLLeIADDF----VDsVvt~ACrLAKHRKS----------------------- 452 (496)
.+.+...++++.+-. ...++++..+.|.+.++.| |+.++..|+..|..|..
T Consensus 184 p~~~~r~~il~~~~~~~~~~~~~~~l~~la~~t~g~sg~di~~l~~~a~~~a~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (322)
T 3eie_A 184 PDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSP 263 (322)
T ss_dssp CCHHHHHHHHHHHHTTCCCCCCHHHHHHHHHTTTTCCHHHHHHHHHHHTTHHHHHHHHCEEEEECC----CCCCEEECCS
T ss_pred CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccccccccccc
Confidence 355555666665533 3357888888888877764 56677777666655532
Q ss_pred --------------------CCcchhhHHHHHhhhcCccccCCCcccccccCCccc
Q 010992 453 --------------------DTLEAKDILVHLERNWNMTLPGFSGDEIKTFRKPVR 488 (496)
Q Consensus 453 --------------------dTLEvKDVQLhLERnWNI~IPGFssDEIr~~rk~~~ 488 (496)
..|+.+|+.-+|++. -|..+.++++.|+++..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~it~~df~~al~~~----~ps~~~~~~~~~~~~~~ 315 (322)
T 3eie_A 264 GDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKST----RPTVNEDDLLKQEQFTR 315 (322)
T ss_dssp SCTTEEEEEGGGSCSSCBCCCCCCHHHHHHHHHHS----CCSSCTTHHHHHHHHHH
T ss_pred cccccccccccccccccccCCCCCHHHHHHHHHhc----CCCCCHHHHHHHHHHHH
Confidence 237788888888863 37778888888877653
No 84
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=70.81 E-value=21 Score=28.35 Aligned_cols=29 Identities=7% Similarity=0.036 Sum_probs=20.8
Q ss_pred HHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 438 SITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 438 sVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+.+..+.++.-..+...|+..|+.-.|..
T Consensus 99 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~ 127 (166)
T 2aao_A 99 DHLFAAFTYFDKDGSGYITPDELQQACEE 127 (166)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHTCC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 34556666666667778999999887764
No 85
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=70.75 E-value=6.4 Score=39.47 Aligned_cols=66 Identities=11% Similarity=0.134 Sum_probs=49.7
Q ss_pred CCHHHHHHHHHhh--C-------CCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHhhhhc--CCCCcchhhHHHHHhhh
Q 010992 402 LTKRSIQELVNQI--D-------PSERLDPDVEDILVDIAED---FVESITMFGCSLAKHR--KSDTLEAKDILVHLERN 467 (496)
Q Consensus 402 LtKrKLqELVrqI--D-------PsesLDpDVEELLLeIADD---FVDsVvt~ACrLAKHR--KSdTLEvKDVQLhLERn 467 (496)
+++..|.++++.+ + ....|++++.+.|.++++- -+.++++.++.+|..+ +...|+.+||.-.|.+.
T Consensus 165 l~~edi~~il~~~l~~~~~~~~~~~~~i~~~al~~L~~~~~Gd~R~lln~Le~a~~~a~~~~~~~~~It~e~v~~~l~~~ 244 (447)
T 3pvs_A 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGER 244 (447)
T ss_dssp CCHHHHHHHHHHHHHCTTTSSTTSSEECCHHHHHHHHHHHCSCHHHHHHHHHHHHHHSCBCTTSCEECCHHHHHHHHTCC
T ss_pred cCHHHHHHHHHHHHHHHhhhhccccCcCCHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccccCCCCccCHHHHHHHHhhh
Confidence 4677788777766 2 3356999999999999763 4566778888888755 55679999998888764
No 86
>1wwi_A Hypothetical protein TTHA1479; structural genomics, unknown function, riken structural genomics/proteomics initiative, RSGI; 1.58A {Thermus thermophilus HB8} SCOP: a.22.1.4 PDB: 1wws_A
Probab=70.38 E-value=7.9 Score=35.35 Aligned_cols=59 Identities=14% Similarity=0.124 Sum_probs=50.4
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhH
Q 010992 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDI 460 (496)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDV 460 (496)
|++=.++++|.|+.. +.-+|++=.+-+.+++++=+.|.+..|-+-||..+.++|+..|+
T Consensus 2 vm~~~~~e~lFR~aa-~LdvdK~d~~r~~d~V~~Kl~DLl~va~~~Ak~n~RdvI~~~DL 60 (148)
T 1wwi_A 2 LMKVAEFERLFRQAA-GLDVDKNDLKRVSDFLRNKLYDLLAVAERNAKYNGRDLIFEPDL 60 (148)
T ss_dssp CSCHHHHHHHHHHHH-CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECGGGS
T ss_pred cCCHHHHHHHHHHHh-ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccccC
Confidence 566788999999874 45677776777889999999999999999999999999988886
No 87
>3f8t_A Predicted ATPase involved in replication control, CDC46/MCM family; helicase, MCM homolog, DNA replication, ATP-binding, DNA-binding; 1.90A {Methanopyrus kandleri AV19}
Probab=69.86 E-value=7.8 Score=40.95 Aligned_cols=68 Identities=19% Similarity=0.222 Sum_probs=51.2
Q ss_pred CCccCCHHHHHHHHHhhC---CCCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHhhhhcCCC
Q 010992 398 GNRILTKRSIQELVNQID---PSERLDPDVEDILVDIAEDF---------------------VESITMFGCSLAKHRKSD 453 (496)
Q Consensus 398 ~nrILtKrKLqELVrqID---PsesLDpDVEELLLeIADDF---------------------VDsVvt~ACrLAKHRKSd 453 (496)
...+++...|.+++..+. -.-.|++++++.|.++..+. ++.++..|..+||.|+++
T Consensus 390 ~~~~ls~e~L~~yi~~ar~~~~~p~ls~ea~~yI~~~y~~tR~~~~~~~~~~~~~~giSpR~leaLiRlA~A~A~L~gR~ 469 (506)
T 3f8t_A 390 DTEVPSYTLLRRYLLYAIREHPAPELTEEARKRLEHWYETRREEVEERLGMGLPTLPVTRRQLESVERLAKAHARMRLSD 469 (506)
T ss_dssp ----CCHHHHHHHHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHHHHHTTCS
T ss_pred cCCCCCHHHHHHHHHHHHhcCCCceeCHHHHHHHHHHHHHHhcCcccccccccccccccHHHHHHHHHHHHHHHHHcCcC
Confidence 456788888888777654 25689999999999885543 235778889999999999
Q ss_pred CcchhhHHHHHh
Q 010992 454 TLEAKDILVHLE 465 (496)
Q Consensus 454 TLEvKDVQLhLE 465 (496)
.|+.+||+..++
T Consensus 470 ~V~~eDV~~Ai~ 481 (506)
T 3f8t_A 470 DVEPEDVDIAAE 481 (506)
T ss_dssp EECHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 999999976654
No 88
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=69.21 E-value=3.3 Score=39.57 Aligned_cols=84 Identities=13% Similarity=0.089 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHhhCCC--CCCCHHHHHHHHHHHHHH----HHHHHHHHHHhhhhcCC-----------------------
Q 010992 402 LTKRSIQELVNQIDPS--ERLDPDVEDILVDIAEDF----VESITMFGCSLAKHRKS----------------------- 452 (496)
Q Consensus 402 LtKrKLqELVrqIDPs--esLDpDVEELLLeIADDF----VDsVvt~ACrLAKHRKS----------------------- 452 (496)
.+.+...++++.+-.. ..++++..+.|.+.++-| |+.++..|+.+|-+|..
T Consensus 217 P~~~~r~~il~~~l~~~~~~~~~~~l~~la~~t~G~sg~dl~~l~~~A~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (355)
T 2qp9_X 217 PDLAARTTMFEINVGDTPSVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPSSP 296 (355)
T ss_dssp CCHHHHHHHHHHHHTTSCBCCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHCSEEEECCC-----CCEEEECT
T ss_pred cCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccCcCCc
Confidence 3455556666654332 247888888888888775 77888888888776621
Q ss_pred --------------------CCcchhhHHHHHhhhcCccccCCCcccccccCCcccc
Q 010992 453 --------------------DTLEAKDILVHLERNWNMTLPGFSGDEIKTFRKPVRI 489 (496)
Q Consensus 453 --------------------dTLEvKDVQLhLERnWNI~IPGFssDEIr~~rk~~~~ 489 (496)
-.|+.+|+.-+|++ ..|-.+.++++.|+++...
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~v~~~df~~Al~~----~~ps~~~~~~~~~~~~~~~ 349 (355)
T 2qp9_X 297 GDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKS----TRPTVNEDDLLKQEQFTRD 349 (355)
T ss_dssp TSSSEEECCGGGSCGGGBCCCCBCHHHHHHHHHH----SCCSSCHHHHHHHHHHHHH
T ss_pred cccchhhcccccccccccccCCccHHHHHHHHHH----cCCCCCHHHHHHHHHHHHH
Confidence 13666777777776 3577777888877776543
No 89
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=68.85 E-value=23 Score=29.89 Aligned_cols=70 Identities=14% Similarity=0.194 Sum_probs=49.0
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH---------HHHHHHHH----------HHHHHHhhhhcCCCCc
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI---------AEDFVESI----------TMFGCSLAKHRKSDTL 455 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI---------ADDFVDsV----------vt~ACrLAKHRKSdTL 455 (496)
+.+++..|++..|..+++.++-. ++.++++++..+ .+||+.-+ +..++++.-.-+...|
T Consensus 62 D~d~~G~i~~~El~~~l~~~g~~--~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I 139 (191)
T 3k21_A 62 DEDGKGYITKEQLKKGLEKDGLK--LPYNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCAFRVFDVDNDGEI 139 (191)
T ss_dssp CTTCSSEECHHHHHHHHHHTTCC--CCTTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGGCCHHHHHHHHHHHSTTCSSCB
T ss_pred CCCCCCCCcHHHHHHHHHHcCCC--cHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhhccHHHHHHHHHHhCCCCCCcC
Confidence 45677789999999999988544 336676666554 26777644 4455665555667788
Q ss_pred chhhHHHHHhh
Q 010992 456 EAKDILVHLER 466 (496)
Q Consensus 456 EvKDVQLhLER 466 (496)
+..++.-+|..
T Consensus 140 s~~El~~~l~~ 150 (191)
T 3k21_A 140 TTAELAHILYN 150 (191)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHh
Confidence 99999888865
No 90
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=68.84 E-value=8.4 Score=31.65 Aligned_cols=59 Identities=17% Similarity=0.174 Sum_probs=39.4
Q ss_pred CCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHH---HHHHHHHHHhhhhcCCCCcchhhHHHHH
Q 010992 402 LTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFV---ESITMFGCSLAKHRKSDTLEAKDILVHL 464 (496)
Q Consensus 402 LtKrKLqELVrqID--PsesLDpDVEELLLeIADDFV---DsVvt~ACrLAKHRKSdTLEvKDVQLhL 464 (496)
++++.+.++++.+- .+..+++++.+.|.+.++-.+ .+++..++.+++ +.|+.+||.-.|
T Consensus 185 l~~~e~~~~l~~~~~~~~~~~~~~~~~~l~~~~~G~~~~~~~~~~~~~~~~~----~~i~~~~v~~~~ 248 (250)
T 1njg_A 185 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGD----GQVSTQAVSAML 248 (250)
T ss_dssp CCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHTTCHHHHHHHHHHHHTTTT----SSBCHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhccC----ceecHHHHHHHh
Confidence 56777888877652 345789999888888887544 444455544432 378889986554
No 91
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=68.60 E-value=1.5 Score=33.29 Aligned_cols=28 Identities=21% Similarity=0.417 Sum_probs=23.2
Q ss_pred hhcCCCCcchhhHHHHHhhhcCccccCC
Q 010992 448 KHRKSDTLEAKDILVHLERNWNMTLPGF 475 (496)
Q Consensus 448 KHRKSdTLEvKDVQLhLERnWNI~IPGF 475 (496)
..-+-+.|++-++...||++||+.|+-.
T Consensus 37 ~dlG~DSl~~vel~~~le~~fgi~i~~~ 64 (84)
T 2kwl_A 37 EDLNADSLDIYELLYLLEEAFDDKIPEN 64 (84)
T ss_dssp HTSSSCHHHHHHHHHHHHHHHTCCTTTT
T ss_pred hhcCCCHHHHHHHHHHHHHHHCCCcCHH
Confidence 3456778889999999999999999753
No 92
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=68.11 E-value=1.1 Score=43.14 Aligned_cols=14 Identities=36% Similarity=0.351 Sum_probs=4.0
Q ss_pred hhhcccccCCCCCC
Q 010992 319 QQHLSSVQPQQSKP 332 (496)
Q Consensus 319 qqqlsq~qqqq~~~ 332 (496)
||++.|.||||+++
T Consensus 381 ~~~~~~~~~~~~~~ 394 (449)
T 3iot_A 381 FESLKSFQQQQQQQ 394 (449)
T ss_dssp HHHHHHTC------
T ss_pred HHHHHhhccccccc
Confidence 44455554444433
No 93
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=67.55 E-value=15 Score=31.50 Aligned_cols=74 Identities=16% Similarity=0.100 Sum_probs=47.2
Q ss_pred cCCCcCCccCCHHHHHHHHHhhCC----CCCCCHHHHHHHHHHH----------HHHHHH-----HHHHHHHhhhhcCCC
Q 010992 393 ESDEFGNRILTKRSIQELVNQIDP----SERLDPDVEDILVDIA----------EDFVES-----ITMFGCSLAKHRKSD 453 (496)
Q Consensus 393 ~~~e~~nrILtKrKLqELVrqIDP----sesLDpDVEELLLeIA----------DDFVDs-----Vvt~ACrLAKHRKSd 453 (496)
.+..+++..|+++.|..+++.+.. ...++++..+.|+..+ +||+.- -+..+.++.- .++.
T Consensus 12 ~~~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~~~l~~aF~~fD-d~~G 90 (174)
T 2i7a_A 12 SGLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRLVHYQHVFQKVQ-TSPG 90 (174)
T ss_dssp CCSCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHHHHHHHHHHHHC-SBTT
T ss_pred cccCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhc-CCCC
Confidence 345566677888888888888732 2345444333333333 356642 2456777777 7888
Q ss_pred CcchhhHHHHHhhh
Q 010992 454 TLEAKDILVHLERN 467 (496)
Q Consensus 454 TLEvKDVQLhLERn 467 (496)
.|+.+++..+|+..
T Consensus 91 ~I~~~El~~~l~~l 104 (174)
T 2i7a_A 91 VLLSSDLWKAIENT 104 (174)
T ss_dssp BEEGGGHHHHHHTC
T ss_pred cCCHHHHHHHHHHh
Confidence 99999999888763
No 94
>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}
Probab=67.12 E-value=2 Score=33.03 Aligned_cols=30 Identities=27% Similarity=0.510 Sum_probs=24.0
Q ss_pred HhhhhcCCCCcchhhHHHHHhhhcCccccC
Q 010992 445 SLAKHRKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 445 rLAKHRKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
.|-..-+-|.|++-++...||++||+.|+-
T Consensus 36 ~l~~dlglDSl~~vel~~~lE~~fgi~i~~ 65 (88)
T 2l4b_A 36 NLAKDFNLDSLDFVDLIMSLEERFSLEISD 65 (88)
T ss_dssp CTTTTTTCCHHHHHHHHHHHHHHTTCCCCH
T ss_pred chhhccCCcHHHHHHHHHHHHHHHCCCcCH
Confidence 343445777888899999999999999974
No 95
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=66.93 E-value=4.8 Score=38.46 Aligned_cols=83 Identities=7% Similarity=0.052 Sum_probs=53.5
Q ss_pred CCHHHHHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHH----HHHHHHHHhhhhc------------CCCCcchhhHHHH
Q 010992 402 LTKRSIQELVNQIDP--SERLDPDVEDILVDIAEDFVE----SITMFGCSLAKHR------------KSDTLEAKDILVH 463 (496)
Q Consensus 402 LtKrKLqELVrqIDP--sesLDpDVEELLLeIADDFVD----sVvt~ACrLAKHR------------KSdTLEvKDVQLh 463 (496)
.+.+...++++.+-. ...|++++.+.|.++++.|.. .++..|+..|..+ +...|+.+|+..+
T Consensus 282 p~~~~r~~il~~~~~~~~~~l~~~~~~~la~~~~g~~~~~l~~L~~~a~~~~~rel~~~~~~~~~~~~~~~i~~~d~~~a 361 (389)
T 3vfd_A 282 PNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTES 361 (389)
T ss_dssp CCHHHHHHHHHHHHTTSCCCSCHHHHHHHHHHTTTCCHHHHHHHHHHHTTHHHHTSCCC---CCSSSCCCCCCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhhhhhhhccchhhcCCcCHHHHHHH
Confidence 456666667665532 356889888888888877544 5555555555544 3456888999888
Q ss_pred HhhhcCccccCCCcccccccCCccc
Q 010992 464 LERNWNMTLPGFSGDEIKTFRKPVR 488 (496)
Q Consensus 464 LERnWNI~IPGFssDEIr~~rk~~~ 488 (496)
|++.. +....++++.|.++..
T Consensus 362 l~~~~----~s~~~~~l~~~~~~~~ 382 (389)
T 3vfd_A 362 LKKIK----RSVSPQTLEAYIRWNK 382 (389)
T ss_dssp HHHCC----CSSCHHHHHHHHHHHH
T ss_pred HHHcC----CCCCHHHHHHHHHHHH
Confidence 88742 3344566666665543
No 96
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=66.84 E-value=13 Score=33.31 Aligned_cols=67 Identities=18% Similarity=0.376 Sum_probs=49.3
Q ss_pred ccCCHHHHHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccc--cC
Q 010992 400 RILTKRSIQELVNQIDPS---ERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL--PG 474 (496)
Q Consensus 400 rILtKrKLqELVrqIDPs---esLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I--PG 474 (496)
.|-+|+-|++|++-|.+. ...+.+|.+-+|+|..+|-+..- + + -.++|+--.|+++ |+.+ |.
T Consensus 88 evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f~-------~----~-~~i~~~y~~Lk~~-G~~f~~P~ 154 (171)
T 1juq_A 88 EVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMALP-------E----E-AKIKDAYHMLKRQ-GIVQSDPP 154 (171)
T ss_dssp HHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHHHHCT-------T----C-HHHHHHHHHHHHT-TSCSSCCC
T ss_pred HHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHHHHcC-------C----C-cHHHHHHHHHHHC-CCCCCCCC
Confidence 355788899999999764 36789999999999998877631 1 1 2488997778776 7766 77
Q ss_pred CCccc
Q 010992 475 FSGDE 479 (496)
Q Consensus 475 FssDE 479 (496)
+..|+
T Consensus 155 ~~~~~ 159 (171)
T 1juq_A 155 IPVDR 159 (171)
T ss_dssp BCCCT
T ss_pred CCccc
Confidence 66443
No 97
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=65.81 E-value=5.9 Score=40.21 Aligned_cols=63 Identities=13% Similarity=0.147 Sum_probs=42.8
Q ss_pred CCCHHH-HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccCCCcccccccC
Q 010992 419 RLDPDV-EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGDEIKTFR 484 (496)
Q Consensus 419 sLDpDV-EELLLeIADDF----VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssDEIr~~r 484 (496)
.+++|+ .+.|.+.++.| |..||..|+.+|-.|+...|+.+|+.-.|++... +....|++.-||
T Consensus 361 ~l~~~~dl~~lA~~t~G~sgadi~~l~~eA~~~a~r~~~~~i~~~d~~~A~~~~~~---~~~~~~~~d~yk 428 (428)
T 4b4t_K 361 SLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEAYATQVK---TDNTVDKFDFYK 428 (428)
T ss_dssp CBCTTCCHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHHSC---SCCCSSCCCSCC
T ss_pred CCCcccCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHhhC---ccCCccHhhhhC
Confidence 344443 34455555544 7899999999999999999999999998887533 222345555443
No 98
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=65.50 E-value=5.8 Score=35.62 Aligned_cols=66 Identities=14% Similarity=0.165 Sum_probs=43.2
Q ss_pred CHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHH-----------HHHHHHHHHHHHhhhhc----CCCCcchhhHHHHHh
Q 010992 403 TKRSIQELVNQID--PSERLDPDVEDILVDIAE-----------DFVESITMFGCSLAKHR----KSDTLEAKDILVHLE 465 (496)
Q Consensus 403 tKrKLqELVrqID--PsesLDpDVEELLLeIAD-----------DFVDsVvt~ACrLAKHR----KSdTLEvKDVQLhLE 465 (496)
++..+.++++.+- -...+++++.+.|.++++ ..+.++++.+|..+..| +.+.++.+|+.....
T Consensus 205 ~~~~~~~il~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~gn~r~l~~~l~~a~~~~~~r~~~~~~~~~~~~~l~~i~~ 284 (309)
T 3syl_A 205 SDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAE 284 (309)
T ss_dssp CHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHHHHC---CEEHHHHHEECH
T ss_pred CHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHhhccH
Confidence 3455666665442 356799999999998854 35667888888766655 456678888865555
Q ss_pred hhc
Q 010992 466 RNW 468 (496)
Q Consensus 466 RnW 468 (496)
..|
T Consensus 285 ~d~ 287 (309)
T 3syl_A 285 EDI 287 (309)
T ss_dssp HHH
T ss_pred HHh
Confidence 444
No 99
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=65.47 E-value=2.7 Score=43.27 Aligned_cols=65 Identities=17% Similarity=0.209 Sum_probs=47.1
Q ss_pred CHHHHHHHHHhhCCCCCCCHHH-HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 403 TKRSIQELVNQIDPSERLDPDV-EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 403 tKrKLqELVrqIDPsesLDpDV-EELLLeIADDF----VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
..+...++++....+..+++|| .++|.+..+-| ++++++.|+.+|..++.+.|+.+|+...|++.
T Consensus 202 d~~~R~~IL~~~~~~~~l~~dv~l~~lA~~t~G~~gadL~~lv~~Aa~~A~~~~~~~It~~dl~~al~~v 271 (499)
T 2dhr_A 202 DVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRV 271 (499)
T ss_dssp CHHHHHHHHHHTTSSSCCCCSSTTHHHHTTSCSCCHHHHHHHHHHHHHHHTTTCCSSCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCChHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCccCHHHHHHHHHHH
Confidence 4444556666655556677666 45555554433 57899999999998888899999999999874
No 100
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=65.46 E-value=13 Score=28.16 Aligned_cols=65 Identities=11% Similarity=0.082 Sum_probs=44.0
Q ss_pred CCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 402 LTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 402 LtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+++..|.+|++.+|.+..|+-+---.++.+..+ -...+..+.++.-..+...|+.+|+...|.+.
T Consensus 6 ~~~~e~~~l~~~~d~~g~i~~~eF~~~~~~~~~-~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 70 (108)
T 2pvb_A 6 LKDADVAAALAACSAADSFKHKEFFAKVGLASK-SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNF 70 (108)
T ss_dssp SCHHHHHHHHHHTCSTTCCCHHHHHHHHTGGGS-CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT
T ss_pred CCHHHHHHHHHHhCCCCcCcHHHHHHHHhCChh-HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 789999999999997777775422222222111 13345566666666777889999998888764
No 101
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=64.67 E-value=0.78 Score=40.71 Aligned_cols=63 Identities=14% Similarity=0.118 Sum_probs=39.3
Q ss_pred HHHHHHHHHhhCCCCCCCHHH-HHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 404 KRSIQELVNQIDPSERLDPDV-EDILVDIAED----FVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 404 KrKLqELVrqIDPsesLDpDV-EELLLeIADD----FVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
.+...++++..-....+++++ .+.|.++++. -|.+++..|+.+|..++.+.|+.+||.-.|++
T Consensus 185 ~~~r~~il~~~~~~~~~~~~~~~~~la~~~~g~~g~dl~~l~~~a~~~a~~~~~~~i~~~~~~~a~~~ 252 (268)
T 2r62_A 185 FNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVER 252 (268)
T ss_dssp TTTHHHHHHHHTSSSCCCSSCCTTTTTSSSCSSCHHHHHHHHHHHHHTTSSSCCCSCCHHHHHTSCTT
T ss_pred HHHHHHHHHHHHhcCCCCCccCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccCCcCHHHHHHHHHH
Confidence 333344444443333333332 3334444443 37789999999999988889999998766655
No 102
>2dzn_B 26S protease regulatory subunit 6B homolog; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} PDB: 2dzo_B
Probab=64.48 E-value=5.9 Score=30.68 Aligned_cols=45 Identities=9% Similarity=0.039 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccCCCccccccc
Q 010992 436 VESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGDEIKTF 483 (496)
Q Consensus 436 VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssDEIr~~ 483 (496)
|..|+..|+..|-+|+...|+.+|+.-.|++... +-...++++-|
T Consensus 37 i~~l~~eAa~~ai~~~~~~i~~~df~~Al~~v~~---~~~~~~~~~~y 81 (82)
T 2dzn_B 37 IAAIMQEAGLRAVRKNRYVILQSDLEEAYATQVK---TDNTVDKFDFY 81 (82)
T ss_dssp HHHHHHHHHHHHHHTTCSEECHHHHHHHHHTTCC--------------
T ss_pred HHHHHHHHHHHHHHhccCCcCHHHHHHHHHHHHc---CcCChHHHHhh
Confidence 6678889999999999999999999999998631 22234466555
No 103
>1r4v_A Hypothetical protein AQ_328; structural genomics, all-alpha, histon fold, PSI, protein ST initiative, midwest center for structural genomics; HET: MSE; 1.90A {Aquifex aeolicus} SCOP: a.22.1.4
Probab=64.27 E-value=7.5 Score=36.23 Aligned_cols=64 Identities=11% Similarity=0.032 Sum_probs=55.2
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhH
Q 010992 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDI 460 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDV 460 (496)
|+=..|++=.+|++|.|+. .+.-+|++=.+-+.+++++=+.|++..|-+-||..+.++|+..|+
T Consensus 21 ~~Mm~vmg~~kferlFR~a-agLDvdK~d~kr~~d~V~~Kl~DLl~va~~~Ak~NgRDvI~~~DL 84 (171)
T 1r4v_A 21 ETMLRPKGFDKLDHYFRTE-LDIDLTDETIELLLNSVKAAFGKLFYGAEQRARWNGRDFIALADL 84 (171)
T ss_dssp CCTTSCTTHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTTCSEECGGGS
T ss_pred HHHHhcCChHHHHHHHHHH-hccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccccC
Confidence 3336699999999999987 456677887778899999999999999999999999999988886
No 104
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=63.53 E-value=6.1 Score=36.19 Aligned_cols=65 Identities=5% Similarity=0.018 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHhhCC--CCCCCHHHHHHHHHHHHH---HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 402 LTKRSIQELVNQIDP--SERLDPDVEDILVDIAED---FVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 402 LtKrKLqELVrqIDP--sesLDpDVEELLLeIADD---FVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
++.+.+.++++.+.. +..+++++.+.|.+...- .+.+++..++.+|..++.+.|+..||.-.+++
T Consensus 184 ~~~~e~~~il~~~~~~~~~~~~~~~~~~l~~~~~G~~r~l~~~l~~~~~~a~~~~~~~i~~~~~~~~~~~ 253 (338)
T 3pfi_A 184 YKDSELALILQKAALKLNKTCEEKAALEIAKRSRSTPRIALRLLKRVRDFADVNDEEIITEKRANEALNS 253 (338)
T ss_dssp CCHHHHHHHHHHHHHHTTCEECHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHH
Confidence 356666677666532 345889998888875443 46678888888898888888999999888876
No 105
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=62.93 E-value=2.1 Score=32.88 Aligned_cols=30 Identities=17% Similarity=0.337 Sum_probs=23.1
Q ss_pred HhhhhcCCCCcchhhHHHHHhhhcCccccC
Q 010992 445 SLAKHRKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 445 rLAKHRKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
.|...-+-+.|++-++.+.||++||+.||-
T Consensus 29 ~l~~~g~lDSl~~velv~~lE~~fgi~i~~ 58 (80)
T 1dv5_A 29 NLFETGLLDSMGTVQLLLELQSQFGVDAPV 58 (80)
T ss_dssp CSSTTSSCCSHHHHHHHHHHTTTSCCCCCC
T ss_pred chhhccCcChHHHHHHHHHHHHHhCCcCCH
Confidence 343333377788888999999999999983
No 106
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=62.40 E-value=7.2 Score=34.60 Aligned_cols=50 Identities=8% Similarity=-0.002 Sum_probs=33.4
Q ss_pred CCCCHHHHHHHHHHHHH-----------HHHHHHHHHHH-----hhhhcCCC-CcchhhHHHHHhhh
Q 010992 418 ERLDPDVEDILVDIAED-----------FVESITMFGCS-----LAKHRKSD-TLEAKDILVHLERN 467 (496)
Q Consensus 418 esLDpDVEELLLeIADD-----------FVDsVvt~ACr-----LAKHRKSd-TLEvKDVQLhLERn 467 (496)
..|++++.+.|.+.+.. .+.++++.++. ++...+.. +|+.+||.-+|++.
T Consensus 233 ~~~~~~a~~~l~~~~~~~~~~~~~g~~R~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~~~l~~~ 299 (310)
T 1ofh_A 233 IAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEV 299 (310)
T ss_dssp EEECHHHHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHSHHHHHHGGGCTTCEEEECHHHHHHHTCSS
T ss_pred eccCHHHHHHHHHHhhhhcccccccCcHHHHHHHHHHHHhhhcCCccccCCEEEEeeHHHHHHHHhh
Confidence 46999999999998843 25566666653 23222222 48899998888763
No 107
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=61.84 E-value=43 Score=25.69 Aligned_cols=71 Identities=14% Similarity=0.284 Sum_probs=38.5
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH-----------HHHHHHHHH--------------HHHHHhhhh
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI-----------AEDFVESIT--------------MFGCSLAKH 449 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI-----------ADDFVDsVv--------------t~ACrLAKH 449 (496)
+.+++..|++..|..+++.++... -+.++++++..+ -++|+.-+. ..++++.-.
T Consensus 18 D~~~~G~i~~~el~~~l~~~~~~~-~~~~~~~l~~~~~~~d~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~ 96 (149)
T 2mys_C 18 DRTGDAKITASQVGDIARALGQNP-TNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDK 96 (149)
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCC-CHHHHHHHHHHhhhccccCCcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCC
Confidence 445666778888888777764321 133344443333 124443332 233444444
Q ss_pred cCCCCcchhhHHHHHhh
Q 010992 450 RKSDTLEAKDILVHLER 466 (496)
Q Consensus 450 RKSdTLEvKDVQLhLER 466 (496)
.+...|+..++.-.|.+
T Consensus 97 d~~G~i~~~el~~~l~~ 113 (149)
T 2mys_C 97 EGNGTVMGAELRHVLAT 113 (149)
T ss_pred CCCceEcHHHHHHHHHH
Confidence 45557888888777765
No 108
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=60.97 E-value=38 Score=28.07 Aligned_cols=48 Identities=13% Similarity=0.400 Sum_probs=29.1
Q ss_pred cCCc-cCCHHHHHHHHHh-hCC--CCCC-CHHHHHHHHHH---------HHHHHHHHHHHHH
Q 010992 397 FGNR-ILTKRSIQELVNQ-IDP--SERL-DPDVEDILVDI---------AEDFVESITMFGC 444 (496)
Q Consensus 397 ~~nr-ILtKrKLqELVrq-IDP--sesL-DpDVEELLLeI---------ADDFVDsVvt~AC 444 (496)
+++. .|++..|.++++. +.. +..+ +.+|+++|.++ -+|||.-+...++
T Consensus 35 dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~~~ 96 (113)
T 2lnk_A 35 EGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIAM 96 (113)
T ss_dssp TSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHHHH
T ss_pred CCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHHH
Confidence 4443 7899999999985 210 1233 45677766655 3477776655444
No 109
>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis}
Probab=59.73 E-value=0.84 Score=38.65 Aligned_cols=50 Identities=12% Similarity=0.142 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccC
Q 010992 423 DVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 423 DVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
++++.|.+|..+.++ ++....|-.--+-|.|++-+|.+.||++||+.|+-
T Consensus 30 ei~~~v~~il~e~l~--I~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I~~ 79 (113)
T 2cgq_A 30 AINATIQRILRTDRG--ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISF 79 (113)
T ss_dssp HHHHHHHHHHTCCSC--CCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCH
T ss_pred HHHHHHHHHHHHHhC--CCCCCchhhhcCCCHHHHHHHHHHHHHHhCCCcCH
Confidence 344444444433333 23333443445677788888899999999999874
No 110
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=59.63 E-value=14 Score=27.99 Aligned_cols=66 Identities=12% Similarity=0.132 Sum_probs=43.4
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
.+++..|++|++.+|....|+-+---.++.+.++- ..-+..+.++.-..+...|+.+++...|++.
T Consensus 5 ~~t~~e~~~~~~~~d~~g~i~~~eF~~~~~~~~~~-~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 70 (108)
T 1rro_A 5 ILSAEDIAAALQECQDPDTFEPQKFFQTSGLSKMS-ASQVKDIFRFIDNDQSGYLDGDELKYFLQKF 70 (108)
T ss_dssp TSCHHHHHHHHHHTCSTTCCCHHHHHHHHSGGGSC-HHHHHHHHHHHCTTCSSEECTHHHHTGGGGT
T ss_pred cCCHHHHHHHHHHccCCCCcCHHHHHHHHhcCccc-HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 47899999999999977778754322222221111 2334556666666677789999998888764
No 111
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=59.55 E-value=13 Score=28.06 Aligned_cols=65 Identities=11% Similarity=0.221 Sum_probs=43.2
Q ss_pred ccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH--HHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 400 RILTKRSIQELVNQIDPSERLDPDVEDILVDIA--EDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 400 rILtKrKLqELVrqIDPsesLDpDVEELLLeIA--DDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
..+++..|.+|++.+|....|+-+ |++.-+. .+ -+.-+..++++.-..+...|+.+++.-.|...
T Consensus 5 ~~~~~~ei~~~~~~~D~~g~i~~~--eF~~~~~~~~~-~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~ 71 (109)
T 3fs7_A 5 DILSAKDIESALSSCQAADSFNYK--SFFSTVGLSSK-TPDQIKKVFGILDQDKSGFIEEEELQLFLKNF 71 (109)
T ss_dssp GTSCHHHHHHHHHHTCSTTCCCHH--HHHHHHTCTTC-CHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGT
T ss_pred CcCCHHHHHHHHHhcCCCCcCcHH--HHHHHHhcCCC-cHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHH
Confidence 457899999999999977777754 3332221 11 12334556666666677789999998777654
No 112
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=59.26 E-value=6 Score=35.93 Aligned_cols=64 Identities=11% Similarity=0.076 Sum_probs=41.3
Q ss_pred CCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHH---HHHhhhhcCCC-CcchhhHHHHHh
Q 010992 402 LTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFVESITMF---GCSLAKHRKSD-TLEAKDILVHLE 465 (496)
Q Consensus 402 LtKrKLqELVrqID--PsesLDpDVEELLLeIADDFVDsVvt~---ACrLAKHRKSd-TLEvKDVQLhLE 465 (496)
++...+.++++++- .+..+|+++.+.|.++++--+..++.. ++.+++.++.+ .|+.+||.-.++
T Consensus 192 ~~~~~~~~~l~~~~~~~~~~i~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~~~~~~~~~It~~~v~~~~~ 261 (353)
T 1sxj_D 192 LDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAG 261 (353)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTSSCHHHHHHHHHHTHHHHHHHCSCCCCCHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCccCccccHHHHHHHhC
Confidence 45666666666642 345799999999999987555554444 44444433322 688888876555
No 113
>1rr7_A Middle operon regulator; MOR, transcription; 2.20A {Enterobacteria phage MU} SCOP: a.4.1.14
Probab=59.20 E-value=11 Score=32.64 Aligned_cols=55 Identities=13% Similarity=0.320 Sum_probs=24.8
Q ss_pred HHHHHhhCCCCCCCHHHH----HHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcC---ccccC
Q 010992 408 QELVNQIDPSERLDPDVE----DILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWN---MTLPG 474 (496)
Q Consensus 408 qELVrqIDPsesLDpDVE----ELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWN---I~IPG 474 (496)
.+|+..+|- |+|++ |+|.+|||-+.. .|.+| |-+..++.++...|-+.|+ +.||-
T Consensus 12 ~~~~~~l~~----~~~~~~~~Pe~L~el~~~ig~-------~L~~~-Gi~~~~~ie~~~~L~~~~gG~~iYIPk 73 (129)
T 1rr7_A 12 DTILAHLDN----PAEDTSRFPALLAELNDLLRG-------ELSRL-GVDPAHSLEIVVAICKHLGGGQVYIPR 73 (129)
T ss_dssp -------------------CHHHHHHHHHHHHHH-------HHHHT-SSCTTSHHHHHHHHHHHHCSSCCCCCC
T ss_pred hHHHHHhcC----hHHHHHHhHHHHHHHHHHHHH-------HHHHc-CCCHHHHHHHHHHHHHHHCCeeEEeeC
Confidence 456666665 66666 888888876554 33344 3333344477777777776 55664
No 114
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=59.10 E-value=54 Score=25.76 Aligned_cols=30 Identities=3% Similarity=0.014 Sum_probs=20.3
Q ss_pred HHHHHHhhhhcCCCCcchhhHHHHHhhhcCc
Q 010992 440 TMFGCSLAKHRKSDTLEAKDILVHLERNWNM 470 (496)
Q Consensus 440 vt~ACrLAKHRKSdTLEvKDVQLhLERnWNI 470 (496)
+..++++.-..+...|+..++.-+|.. +|.
T Consensus 85 l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~ 114 (148)
T 1exr_A 85 LIEAFKVFDRDGNGLISAAELRHVMTN-LGE 114 (148)
T ss_dssp HHHHHHHHSTTCSSCBCHHHHHHHHHH-TTC
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHHHH-hCC
Confidence 344566665667778999999877765 343
No 115
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=59.02 E-value=8.8 Score=31.76 Aligned_cols=16 Identities=13% Similarity=0.609 Sum_probs=9.3
Q ss_pred hhhHHHHHhhhcCccc
Q 010992 457 AKDILVHLERNWNMTL 472 (496)
Q Consensus 457 vKDVQLhLERnWNI~I 472 (496)
=.++...|++.|++.+
T Consensus 189 d~~f~~~~~~~w~~~~ 204 (204)
T 3e3r_A 189 DEEFVAMMTSAWQLKL 204 (204)
T ss_dssp HHHHHHHHHHHHTC--
T ss_pred hHHHHHHHHHhCCCCC
Confidence 3456667777777653
No 116
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=58.85 E-value=22 Score=31.13 Aligned_cols=66 Identities=14% Similarity=0.205 Sum_probs=48.0
Q ss_pred cCCHHHHHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccCCCc
Q 010992 401 ILTKRSIQELVNQIDPS---ERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSG 477 (496)
Q Consensus 401 ILtKrKLqELVrqIDPs---esLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFss 477 (496)
|-+|+-|.+|++-|.+. ...+.+|.+-+|+|...|-+.. . .+ -+++|+---|++. |+.||.-.-
T Consensus 77 vas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f-------~----~~-p~i~~~y~~Lk~~-G~~Fp~~~~ 143 (148)
T 1mhq_A 77 VAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWF-------P----ED-IKIRDAYQMLKKQ-GIIKQDPKL 143 (148)
T ss_dssp HTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHHHC-------T----TC-HHHHHHHHHHHHT-TSSCSCCCC
T ss_pred HhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHHHHc-------C----CC-chHHHHHHHHHHc-CCCCCCCCC
Confidence 44788899999988764 3578999999999998887652 1 11 2488987777776 999987764
Q ss_pred cc
Q 010992 478 DE 479 (496)
Q Consensus 478 DE 479 (496)
+|
T Consensus 144 ~~ 145 (148)
T 1mhq_A 144 PV 145 (148)
T ss_dssp --
T ss_pred CC
Confidence 43
No 117
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=58.42 E-value=32 Score=29.02 Aligned_cols=74 Identities=9% Similarity=0.169 Sum_probs=45.2
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHHH-----HHHHHHHH------------HHHHHHhhhhcCCCCcc
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPD-VEDILVDI-----AEDFVESI------------TMFGCSLAKHRKSDTLE 456 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLeI-----ADDFVDsV------------vt~ACrLAKHRKSdTLE 456 (496)
+.+++..|++..|..+++.++ ..++.+ +.+++..+ .++|+.-+ +..++++.-..+...|+
T Consensus 67 D~d~~G~i~~~el~~~l~~lg--~~~~~~~~~~l~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is 144 (196)
T 3dtp_E 67 DQDKDGFISKNDIRATFDSLG--RLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGDGKCKE 144 (196)
T ss_dssp CCSCSSBCCHHHHHHHHHTTS--CCCCHHHHHHHHTTSSSCCBHHHHHHHHHHCCCSSCCHHHHHHHHHTTCSSSSCCBH
T ss_pred CCCCCCcCCHHHHHHHHHHhC--CCCCHHHHHHHHHHccCCCcHHHHHHHHHHHhcCCCcHHHHHHHHHHHCCCCCCcCc
Confidence 355677888888888888774 234433 43333221 24555433 34555555556777889
Q ss_pred hhhHHHHHhhhcCccc
Q 010992 457 AKDILVHLERNWNMTL 472 (496)
Q Consensus 457 vKDVQLhLERnWNI~I 472 (496)
..++.-+| .+|..+
T Consensus 145 ~~El~~~l--~~g~~~ 158 (196)
T 3dtp_E 145 ETLKRSLT--TWGEKF 158 (196)
T ss_dssp HHHHHHHH--HSSSCC
T ss_pred HHHHHHHH--HcCCCC
Confidence 99998888 566443
No 118
>3ncv_A DNA mismatch repair protein MUTL; endonuclease, dimer, hydrolase; HET: DNA; 2.40A {Neisseria gonorrhoeae}
Probab=58.18 E-value=7 Score=36.29 Aligned_cols=40 Identities=10% Similarity=0.074 Sum_probs=30.8
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccCCCccc
Q 010992 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGDE 479 (496)
Q Consensus 439 Vvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssDE 479 (496)
+.+.||+.|-..| +.|+.+.+.--|++-+.+..|.+...-
T Consensus 161 ~as~ACr~AIk~g-~~Ls~~Em~~Ll~~L~~~~~P~~CPHG 200 (220)
T 3ncv_A 161 LATMSCHGSIRAG-RRLTLPEMNALLRDMENTPRSNQCNHG 200 (220)
T ss_dssp HHHHTTCSSSCSS-CCCCHHHHHHHHHHHHTSTTTTBCTTS
T ss_pred HHHHHHHhhhhcC-CCCCHHHHHHHHHHHHhCCCCCcCCCC
Confidence 4578899887665 568999998888888888888766543
No 119
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=58.10 E-value=28 Score=28.72 Aligned_cols=70 Identities=13% Similarity=0.153 Sum_probs=44.9
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH----------HHHHHH-----------HHHHHHHhhhhcCCC
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIA----------EDFVES-----------ITMFGCSLAKHRKSD 453 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIA----------DDFVDs-----------Vvt~ACrLAKHRKSd 453 (496)
+.+++..|++..|.++++.++. .++++..+.|.+.+ +||+.- .+..+++..-..+..
T Consensus 47 D~d~~G~i~~~e~~~~l~~~~~--~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 124 (204)
T 3e3r_A 47 DRDGSRSLDADEFRQGLAKLGL--VLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDG 124 (204)
T ss_dssp CTTCCSSBCHHHHHHHHHTTTC--CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHHHCTTCSS
T ss_pred ccCCCCCcCHHHHHHHHHHcCC--CCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHHhCcCCCC
Confidence 4567778888888888887743 34444333333333 366653 355666666566777
Q ss_pred CcchhhHHHHHhh
Q 010992 454 TLEAKDILVHLER 466 (496)
Q Consensus 454 TLEvKDVQLhLER 466 (496)
.|+..++.-+|+.
T Consensus 125 ~I~~~El~~~l~~ 137 (204)
T 3e3r_A 125 VVTVDDLRGVYSG 137 (204)
T ss_dssp EECHHHHHHHCCC
T ss_pred eEeHHHHHHHHcc
Confidence 7888888777764
No 120
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=58.01 E-value=41 Score=26.27 Aligned_cols=73 Identities=12% Similarity=0.084 Sum_probs=43.7
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH----------HHHHHHHHH------------HHHHHhhhhcCC
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI----------AEDFVESIT------------MFGCSLAKHRKS 452 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI----------ADDFVDsVv------------t~ACrLAKHRKS 452 (496)
+.+++..|++..|..+++.++. .++++..+.|.+. .++|+.-+. ..++++.-..+.
T Consensus 33 D~~~~G~i~~~e~~~~l~~~~~--~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~ 110 (161)
T 3fwb_A 33 DMNNDGFLDYHELKVAMKALGF--ELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHT 110 (161)
T ss_dssp CTTSSSEECHHHHHHHHHHTTC--CCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHHHHHCTTCS
T ss_pred CCCCCCcCcHHHHHHHHHHcCC--CCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHHHHHcCCCC
Confidence 4456677888888888887632 3444433333333 245554443 344555545566
Q ss_pred CCcchhhHHHHHhhhcCc
Q 010992 453 DTLEAKDILVHLERNWNM 470 (496)
Q Consensus 453 dTLEvKDVQLhLERnWNI 470 (496)
..|+..++.-+|++ ++.
T Consensus 111 G~i~~~el~~~l~~-~~~ 127 (161)
T 3fwb_A 111 GKISIKNLRRVAKE-LGE 127 (161)
T ss_dssp SEECHHHHHHHHHH-TTC
T ss_pred CeEeHHHHHHHHHH-hCC
Confidence 78999999888875 443
No 121
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=57.89 E-value=19 Score=25.69 Aligned_cols=21 Identities=10% Similarity=0.298 Sum_probs=13.6
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 010992 395 DEFGNRILTKRSIQELVNQID 415 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (496)
+.+++..|++..|..+++.+.
T Consensus 13 D~~~~G~i~~~el~~~l~~~g 33 (78)
T 1k9u_A 13 DTNGDGKISLSELTDALRTLG 33 (78)
T ss_dssp CTTCSSEECHHHHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHhC
Confidence 345555677777777777664
No 122
>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*
Probab=57.72 E-value=2.7 Score=31.80 Aligned_cols=27 Identities=26% Similarity=0.545 Sum_probs=22.2
Q ss_pred hhcCCCCcchhhHHHHHhhhcCccccC
Q 010992 448 KHRKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 448 KHRKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
..-|-+.|++-++...||+.||+.|+-
T Consensus 33 ~dlg~DSl~~vel~~~le~~fgi~i~~ 59 (81)
T 3gzm_A 33 KDLGADSLDLVELIMALEEKFNVTISD 59 (81)
T ss_dssp HHSCCCHHHHHHHHHHHHHHHTCCCCH
T ss_pred hhcCCCHHHHHHHHHHHHHHHCCCcCH
Confidence 345777788889999999999999964
No 123
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=57.42 E-value=21 Score=30.94 Aligned_cols=63 Identities=17% Similarity=0.263 Sum_probs=40.6
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH-------HHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 398 GNRILTKRSIQELVNQIDPSERLDPDVEDILVDI-------AEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI-------ADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+.-.++-..|.+-+..+ +...|++|.|=++|| +++||+.-+.|++. ++ ...+.+..+ --+||+
T Consensus 22 ~~~~Vsae~L~eEfdef--Gi~~~d~VldKc~ELC~~y~lda~e~VeeWmAFsts--~~--g~~pT~enL-~~FEhE 91 (101)
T 2keb_A 22 GSMSASAQQLAEELQIF--GLDCEEALIEKLVELCVQYGQNEEGMVGELIAFCTS--TH--KVGLTSEIL-NSFEHE 91 (101)
T ss_dssp --CCCCHHHHHHHHHHH--TCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH--HT--CSBCCHHHH-HHHHHH
T ss_pred chhhccHHHHHHHHHHc--CCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh--cC--CCCCCHHHH-HHHHHH
Confidence 33445555555555544 456788999999888 79999999999663 44 343555544 455655
No 124
>3kdg_A DNA mismatch repair protein MUTL; endonuclease, DNA damage, DNA repair, hydrolase; HET: DNA; 2.00A {Bacillus subtilis} PDB: 3gab_A* 3kdk_A*
Probab=57.24 E-value=9.8 Score=34.25 Aligned_cols=39 Identities=15% Similarity=0.151 Sum_probs=26.2
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccCCCcc
Q 010992 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGD 478 (496)
Q Consensus 439 Vvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssD 478 (496)
+.+.||+.|-..| +.|+...+.--|++-..+..|.....
T Consensus 138 ~~~~ACr~AIk~g-~~Ls~~Em~~Ll~~L~~~~~p~~CpH 176 (197)
T 3kdg_A 138 AIMMSCKGSIKAN-RHLRNDEIKALLDDLRSTSDPFTCPH 176 (197)
T ss_dssp HHHHHHCC----C-CCCCHHHHHHHHHHHHHSSCTTBCTT
T ss_pred HHHHhhHhhccCC-CCCCHHHHHHHHHHHHcCCCCCcCCC
Confidence 5678999998666 55888888877877777777766544
No 125
>1yvi_A Histidine-containing phosphotransfer protein; structural genomics, protein structure initiative, PSI, CESG, AK104879, phosphorelay mediator, HP1; 2.00A {Oryza sativa} SCOP: a.24.10.2 PDB: 2q4f_A 1wn0_A
Probab=57.16 E-value=20 Score=30.84 Aligned_cols=45 Identities=9% Similarity=0.169 Sum_probs=26.4
Q ss_pred HHHHHHHHHhhCCCCCCCHH-----------H-HHHHHHHHHHHHHHHHHHHHHhhh
Q 010992 404 KRSIQELVNQIDPSERLDPD-----------V-EDILVDIAEDFVESITMFGCSLAK 448 (496)
Q Consensus 404 KrKLqELVrqIDPsesLDpD-----------V-EELLLeIADDFVDsVvt~ACrLAK 448 (496)
++.|.+|++.+.....||++ - +|++.+|.+.|++++-..--.|.+
T Consensus 7 ~~~~~~~~~~~~~~~~lD~~~~~L~~L~~~~~~~~~~~elv~~Fl~d~~~~l~~L~~ 63 (149)
T 1yvi_A 7 RDQLTALLSSMFSQGLVDEQFQQLQMLQDEGGTPGFVSEVVTLFCDDADRIINEIAT 63 (149)
T ss_dssp HHHHHHHHHHHHHTTSCCHHHHHHHHHHC---CTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccccccccHHHHHHHHhhCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666666666666654 1 355667777777776544444433
No 126
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=56.58 E-value=6.4 Score=40.64 Aligned_cols=60 Identities=20% Similarity=0.251 Sum_probs=41.0
Q ss_pred HHHHHhhCCCCCCCHHH-HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 408 QELVNQIDPSERLDPDV-EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 408 qELVrqIDPsesLDpDV-EELLLeIADDF----VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
.++++..-.+..+++|| .+.|.+.++.| |..||..|+.+|-.++...|+.+|+.-.|+|-
T Consensus 359 ~~Il~~~l~~~~l~~dvdl~~LA~~T~GfSGADI~~l~~eA~~~Air~~~~~It~eDf~~Al~rv 423 (437)
T 4b4t_I 359 KKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERV 423 (437)
T ss_dssp HHHHHHHHTTSCBCSCCCHHHHHHHCCSCCHHHHHHHHHHHHHHHHHTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCcCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHH
Confidence 33443333334444443 34455555543 78899999999999999999999999999874
No 127
>3us6_A Histidine-containing phosphotransfer protein type MTHPT1; helix bundle, plant hormone signal transduction, cytokinin S transduction; 1.45A {Medicago truncatula}
Probab=56.25 E-value=19 Score=31.50 Aligned_cols=49 Identities=10% Similarity=0.115 Sum_probs=32.6
Q ss_pred HHHHHHHHHhhCCCCCCCHH-----------HHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 010992 404 KRSIQELVNQIDPSERLDPD-----------VEDILVDIAEDFVESITMFGCSLAKHRKS 452 (496)
Q Consensus 404 KrKLqELVrqIDPsesLDpD-----------VEELLLeIADDFVDsVvt~ACrLAKHRKS 452 (496)
.++|.+|++.+.....||+. -.|++.+|.+.|+++.-..-..|.+.-..
T Consensus 7 ~~~~~~~~~~l~~~g~LD~~f~qL~~L~~~~~~~~~~ell~~Fl~d~~~~l~~L~~al~~ 66 (153)
T 3us6_A 7 RRQWVDYIKSMFMEGFLDGQFLQLQQLQDENNPEFVFEVVSLFFDDSERILKDLSFAVDQ 66 (153)
T ss_dssp HHHHHHHHHHHHHTTSCCHHHHHHHHTCBTTBTTHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhcccccchHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 35566777766555666632 24678899999999987766666555433
No 128
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=55.69 E-value=13 Score=28.24 Aligned_cols=65 Identities=9% Similarity=0.135 Sum_probs=44.0
Q ss_pred ccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH--HHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 400 RILTKRSIQELVNQIDPSERLDPDVEDILVDIA--EDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 400 rILtKrKLqELVrqIDPsesLDpDVEELLLeIA--DDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
..+++..|.+|++.+|....|+-+ |++.-+. .+ -+.-+..++++.-..+...|+.+++...|...
T Consensus 4 ~~~s~~ei~~~~~~~d~~g~i~~~--eF~~~~~~~~~-~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~ 70 (109)
T 5pal_A 4 KVLKADDINKAISAFKDPGTFDYK--RFFHLVGLKGK-TDAQVKEVFEILDKDQSGFIEEEELKGVLKGF 70 (109)
T ss_dssp GTSCHHHHHHHHHHTCSTTCCCHH--HHHHHHTCTTC-CHHHHHHHHHHHCTTCSSEECHHHHHTHHHHH
T ss_pred CcCCHHHHHHHHHHhCCCCcCcHH--HHHHHHhhccC-cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 468999999999999987777743 3333221 11 12334556666666677789999998888764
No 129
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=55.62 E-value=7.1 Score=40.58 Aligned_cols=60 Identities=10% Similarity=0.171 Sum_probs=41.2
Q ss_pred HHHHHhhCCCCCCCHHH-HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 408 QELVNQIDPSERLDPDV-EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 408 qELVrqIDPsesLDpDV-EELLLeIADDF----VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
.++++..-.+..++.+| .+.|.++++.| |..||..|+.+|-.++...|+.+|+.-.|+|-
T Consensus 386 ~~Ilk~~l~~~~l~~dvdl~~LA~~T~GfSGADI~~l~~eAa~~Air~~~~~it~~Df~~Al~kV 450 (467)
T 4b4t_H 386 ANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKV 450 (467)
T ss_dssp HHHHHHHHTTSCBCSSCCHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHH
Confidence 34443333333444443 34566665544 78899999999988899999999999999874
No 130
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=55.59 E-value=19 Score=27.17 Aligned_cols=65 Identities=9% Similarity=0.158 Sum_probs=44.0
Q ss_pred ccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH--HHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 400 RILTKRSIQELVNQIDPSERLDPDVEDILVDIA--EDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 400 rILtKrKLqELVrqIDPsesLDpDVEELLLeIA--DDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
..+++..|.+|++.+|.+..|+-+ |++.-+. .+- ..-+..++++.-..+...|+.+|+.-.|.+.
T Consensus 5 ~~~~~~e~~~~~~~~d~~g~i~~~--eF~~~~~~~~~~-~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 71 (109)
T 1bu3_A 5 GILADADVAAALKACEAADSFNYK--AFFAKVGLTAKS-ADDIKKAFFVIDQDKSGFIEEDELKLFLQVF 71 (109)
T ss_dssp CSSCHHHHHHHHHHTCSTTCCCHH--HHHHHHTGGGSC-HHHHHHHHHHHCTTCSSSEEHHHHHTHHHHH
T ss_pred ccCCHHHHHHHHHHhCCCCcCcHH--HHHHHHHcChhh-HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 357899999999999977777744 3322221 111 2335566666666777789999998888764
No 131
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=55.46 E-value=15 Score=27.65 Aligned_cols=66 Identities=12% Similarity=0.121 Sum_probs=43.2
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
.+++..|.+|++.+|.+..|+-+---.++.+..+- ...+..++++.-..+...|+.+|+.-.|.+.
T Consensus 5 ~~t~~e~~~~~~~~d~~g~i~~~eF~~~~~~~~~~-~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 70 (109)
T 1rwy_A 5 LLSAEDIKKAIGAFTAADSFDHKKFFQMVGLKKKS-ADDVKKVFHILDKDKSGFIEEDELGSILKGF 70 (109)
T ss_dssp HSCHHHHHHHHHTTCSTTCCCHHHHHHHHTGGGSC-HHHHHHHHHHHSTTCSSEECHHHHHTHHHHH
T ss_pred cCCHHHHHHHHHHcCCCCcEeHHHHHHHHhcCcch-HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHH
Confidence 36889999999999977777754222222211111 2344556666666677789999998888775
No 132
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=55.34 E-value=45 Score=26.72 Aligned_cols=31 Identities=10% Similarity=-0.022 Sum_probs=21.6
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhhcCc
Q 010992 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWNM 470 (496)
Q Consensus 439 Vvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI 470 (496)
.+..+.++.-..+...|+.+++.-.|.. +|+
T Consensus 71 ~~~~~F~~~D~d~~G~i~~~el~~~l~~-~g~ 101 (165)
T 1k94_A 71 AWKENFMTVDQDGSGTVEHHELRQAIGL-MGY 101 (165)
T ss_dssp HHHHHHHHHCTTCCSBCCHHHHHHHHHH-TTC
T ss_pred HHHHHHHHhCCCCCceECHHHHHHHHHH-hCC
Confidence 3455666666667778999999888875 343
No 133
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=55.03 E-value=50 Score=25.79 Aligned_cols=32 Identities=6% Similarity=-0.034 Sum_probs=22.4
Q ss_pred HHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcC
Q 010992 437 ESITMFGCSLAKHRKSDTLEAKDILVHLERNWN 469 (496)
Q Consensus 437 DsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWN 469 (496)
...+..+.++.-..+...|+..++.-.|+. +|
T Consensus 95 ~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~-~g 126 (162)
T 1top_A 95 EEELANCFRIFDKNADGFIDIEELGEILRA-TG 126 (162)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHT-TT
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-hC
Confidence 344555666666677788999999888865 44
No 134
>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}
Probab=54.98 E-value=3 Score=31.52 Aligned_cols=26 Identities=15% Similarity=0.572 Sum_probs=21.2
Q ss_pred hcCCCCcchhhHHHHHhhhcCccccC
Q 010992 449 HRKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 449 HRKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
.-|-+.|.+-++...||++||+.|+-
T Consensus 36 dlG~DSl~~vel~~~le~~fgi~i~~ 61 (82)
T 2qnw_A 36 DLDADSLDSVELVMAFEEKFGVSIPD 61 (82)
T ss_dssp HSCCCHHHHHHHHHHHHHHHTCCCCH
T ss_pred ccCCcHHHHHHHHHHHHHHHCCcCCH
Confidence 34667788888999999999999874
No 135
>3fi7_A LMO1076 protein; listeria monocytogenes, autolysin, N acetylglucosaminidase, peptidoglycan hydrolase, autoinhibition, GH73, hydrolase; 2.35A {Undefined}
Probab=54.87 E-value=12 Score=34.43 Aligned_cols=54 Identities=20% Similarity=0.304 Sum_probs=39.3
Q ss_pred CCCCHHHHHHHHHH------HHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccc
Q 010992 418 ERLDPDVEDILVDI------AEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL 472 (496)
Q Consensus 418 esLDpDVEELLLeI------ADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I 472 (496)
..|+.-|.+.+..+ .++||+.+...|.+++|.-+-.. .+.=.|-+||-.||...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~FI~~i~~~A~~~~~~~gi~~-s~~laQa~lESgwG~s~ 69 (183)
T 3fi7_A 10 FSLEQNRDDAMAALASTPTFQQTFINSISTQAMDLCKKYNLYP-SVMIAQAALESNWGRSE 69 (183)
T ss_dssp CCHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHHHHTTCCH-HHHHHHHHHHHTTTTST
T ss_pred hHHHHhhhhhcccccCCCccHHHHHHHHHHHHHHHHHHhCCCH-HHHHHHHHHHccCCCCc
Confidence 34444444455544 67899999999999999888763 45556889999998654
No 136
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=54.67 E-value=12 Score=33.52 Aligned_cols=85 Identities=12% Similarity=0.160 Sum_probs=50.7
Q ss_pred CHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHH----HHHHHHHHHhhhhcC------------CCCcchhhHHHHH
Q 010992 403 TKRSIQELVNQID--PSERLDPDVEDILVDIAEDFV----ESITMFGCSLAKHRK------------SDTLEAKDILVHL 464 (496)
Q Consensus 403 tKrKLqELVrqID--PsesLDpDVEELLLeIADDFV----DsVvt~ACrLAKHRK------------SdTLEvKDVQLhL 464 (496)
+.+...++++.+- -...+++++.+.|.+.++.|. +.++..|+..|..+. ...|+.+|+.-.|
T Consensus 190 ~~~~r~~il~~~~~~~~~~~~~~~~~~la~~~~g~~~~~l~~l~~~a~~~a~r~~~~~~~~~~~~~~~~~i~~~d~~~a~ 269 (297)
T 3b9p_A 190 DEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSL 269 (297)
T ss_dssp CHHHHHHHHHHHHGGGSCCSCHHHHHHHHHHTTTCCHHHHHHHHHHHTTHHHHTCC--------CCCCCCCCHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhhhhcccccccccCCcCHHHHHHHH
Confidence 4444444544432 123588888888888877654 466667776666553 2467888887776
Q ss_pred hhhcCccccCCCcccccccCCcccccC
Q 010992 465 ERNWNMTLPGFSGDEIKTFRKPVRIVT 491 (496)
Q Consensus 465 ERnWNI~IPGFssDEIr~~rk~~~~~~ 491 (496)
++ .-|-...++++.|.++...-|
T Consensus 270 ~~----~~~s~~~~~~~~~~~~~~~~~ 292 (297)
T 3b9p_A 270 KR----IRRSVAPQSLNSYEKWSQDYG 292 (297)
T ss_dssp TS----CCCSSCHHHHHHHHHHC----
T ss_pred HH----cCCCCCHHHHHHHHHHHHHhC
Confidence 65 235556667777776655444
No 137
>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.55 E-value=1.5 Score=34.78 Aligned_cols=23 Identities=22% Similarity=0.595 Sum_probs=16.5
Q ss_pred CCCCcchhhHHHHHhhhcCcccc
Q 010992 451 KSDTLEAKDILVHLERNWNMTLP 473 (496)
Q Consensus 451 KSdTLEvKDVQLhLERnWNI~IP 473 (496)
+-|-|++-+|...||++||+.|+
T Consensus 46 G~DSL~~vel~~~le~~fgi~i~ 68 (99)
T 2dnw_A 46 GLDSLDQVEIIMAMEDEFGFEIP 68 (99)
T ss_dssp CCCHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCHHHHHHHHHHHHHHHCCCCC
Confidence 45566677777778888887775
No 138
>2zyc_A Peptidoglycan hydrolase FLGJ; 1.74A {Sphingomonas SP} PDB: 3k3t_A
Probab=54.20 E-value=7.5 Score=35.03 Aligned_cols=41 Identities=17% Similarity=0.177 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccc
Q 010992 431 IAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL 472 (496)
Q Consensus 431 IADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I 472 (496)
|.++||+.+...|.+++|.-+-.. .+-=.|-+||-.||-..
T Consensus 1 ~~~~FI~~~~~~A~~~~~~~gI~~-sv~lAQA~LESgwG~S~ 41 (170)
T 2zyc_A 1 MAQAFVDATWPQAAKAAQSLGVPA-HFLVAQAALETGWGKSQ 41 (170)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTSCH-HHHHHHHHHHHTTTTTC
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCH-HHHHHHHHHHcCCCCCc
Confidence 568999999999999999888653 34445788999998654
No 139
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=54.10 E-value=33 Score=28.72 Aligned_cols=72 Identities=11% Similarity=0.105 Sum_probs=46.9
Q ss_pred CCcCCccCCHHHHHHHHHhhCCC---CCCCHHHHHHHHHHH----------HHHHHHH-----HHHHHHhhhhcCCCCcc
Q 010992 395 DEFGNRILTKRSIQELVNQIDPS---ERLDPDVEDILVDIA----------EDFVESI-----TMFGCSLAKHRKSDTLE 456 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPs---esLDpDVEELLLeIA----------DDFVDsV-----vt~ACrLAKHRKSdTLE 456 (496)
+.+++..|++..|.++++.+... ..++++..+.|.+.+ +||+.-+ +..+.++.-..+...|+
T Consensus 42 D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~I~ 121 (198)
T 1juo_A 42 VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTVD 121 (198)
T ss_dssp HHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHTTCTTCCSEEC
T ss_pred hCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHHHHHHHhCCCCCCcCC
Confidence 45677889999999999988642 245554444444443 3566533 34455555556677899
Q ss_pred hhhHHHHHhh
Q 010992 457 AKDILVHLER 466 (496)
Q Consensus 457 vKDVQLhLER 466 (496)
.+++.-.|++
T Consensus 122 ~~el~~~l~~ 131 (198)
T 1juo_A 122 PQELQKALTT 131 (198)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999888875
No 140
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=53.88 E-value=26 Score=30.33 Aligned_cols=87 Identities=10% Similarity=0.146 Sum_probs=47.4
Q ss_pred HHHHHHHHHh--hCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHhhhhcCCCCcchhhH-HHHHhhhcCccccCC
Q 010992 404 KRSIQELVNQ--IDPSERLDPDVEDILVDIAEDF-----VESITMFGCSLAKHRKSDTLEAKDI-LVHLERNWNMTLPGF 475 (496)
Q Consensus 404 KrKLqELVrq--IDPsesLDpDVEELLLeIADDF-----VDsVvt~ACrLAKHRKSdTLEvKDV-QLhLERnWNI~IPGF 475 (496)
++.|..|+.. |. -...+++..+.+++++.+. ++.+=.....||+..+...| ..|- .--.-+.+|+.|=|.
T Consensus 44 r~~l~~l~~~~~l~-v~~~~~~~i~~v~~~~~~~gd~~~Ls~~D~~lIaLA~~l~~~lv-T~D~~l~~vA~~~Gv~v~~~ 121 (165)
T 2lcq_A 44 KIFLESLISAGKVK-IAEPSKESIDRIIQVAKETGEVNELSKADIEVLALAYELKGEIF-SDDYNVQNIASLLGLRFRTL 121 (165)
T ss_dssp HHHHHHHHHTTSEE-ECCCCHHHHHHHHHHHHHHSCSSCSCHHHHHHHHHHHHHTCCEE-CCCHHHHHHHHHTTCCEECC
T ss_pred HHHHHHhhccCCEE-EecCCHHHHHHHHHHHHHcCCcccCCHHHHHHHHhHHHhCCeEE-cCcHHHHHHHHHCCCeEEch
Confidence 3556655542 11 1223444444555555332 22333456678887777544 3332 334445578887766
Q ss_pred C--cccccccCCcccccCC
Q 010992 476 S--GDEIKTFRKPVRIVTD 492 (496)
Q Consensus 476 s--sDEIr~~rk~~~~~~d 492 (496)
. -.+++.|+..|..||.
T Consensus 122 ~~~i~~~~~~~y~C~~Cg~ 140 (165)
T 2lcq_A 122 KRGIKKVIKWRYVCIGCGR 140 (165)
T ss_dssp SCCCSSCCCCCEEESSSCC
T ss_pred hhhccccccEEEECCCCCC
Confidence 6 3466777777888875
No 141
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=53.69 E-value=71 Score=25.65 Aligned_cols=27 Identities=4% Similarity=-0.011 Sum_probs=18.3
Q ss_pred HHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 440 TMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 440 vt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+..+.+..-..+...|+..++.-.|+.
T Consensus 86 ~~~~F~~~D~d~~G~I~~~E~~~~l~~ 112 (179)
T 2f2o_A 86 IREAFRVFDKDGNGYISAAELRHVMTN 112 (179)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 445555555556677899998777765
No 142
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=53.56 E-value=55 Score=25.85 Aligned_cols=33 Identities=6% Similarity=0.031 Sum_probs=23.1
Q ss_pred HHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCcc
Q 010992 438 SITMFGCSLAKHRKSDTLEAKDILVHLERNWNMT 471 (496)
Q Consensus 438 sVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~ 471 (496)
..+..+.++.-..+...|+..++.-+|.. +|..
T Consensus 79 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~ 111 (143)
T 2obh_A 79 EEILKAFKLFDDDETGKISFKNLKRVAKE-LGEN 111 (143)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHH-TTCC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH-hCCC
Confidence 34556677766677788999999877754 4543
No 143
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=53.37 E-value=48 Score=22.50 Aligned_cols=43 Identities=5% Similarity=-0.014 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 424 VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 424 VEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
...+|..+...+-+..+...++.+-..+...|+.++..-.+.+
T Consensus 22 ~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 22 VKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 3333444444444455555556665566778888888666653
No 144
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=53.31 E-value=27 Score=27.76 Aligned_cols=19 Identities=16% Similarity=0.368 Sum_probs=10.0
Q ss_pred CcCCccCCHHHHHHHHHhh
Q 010992 396 EFGNRILTKRSIQELVNQI 414 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqI 414 (496)
.+++..|++..|.++++.+
T Consensus 47 ~d~~G~I~~~El~~~l~~l 65 (100)
T 2lv7_A 47 RDGNGFISKQELGTAMRSL 65 (100)
T ss_dssp SSCSSCBCHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHh
Confidence 3444555555555555554
No 145
>4e2i_2 DNA polymerase alpha subunit B; replication initiation, hydrolase-DNA binding complex, hydro binding protein complex; HET: DNA; 5.00A {Homo sapiens}
Probab=52.94 E-value=14 Score=30.50 Aligned_cols=40 Identities=20% Similarity=0.312 Sum_probs=32.1
Q ss_pred HHHHHHhhCC-CCCCCHHHHHHHHHHH-------HHHHHHHHHHHHHh
Q 010992 407 IQELVNQIDP-SERLDPDVEDILVDIA-------EDFVESITMFGCSL 446 (496)
Q Consensus 407 LqELVrqIDP-sesLDpDVEELLLeIA-------DDFVDsVvt~ACrL 446 (496)
+++|..++|- +...+++|.|-|++|+ ||||++.+.|++..
T Consensus 5 ~e~l~~el~~Fgi~c~d~v~eKl~ElC~~y~~~~~e~V~ew~Afs~s~ 52 (78)
T 4e2i_2 5 AQQLAEELQIFGLDCEEALIEKLVELCVQYGQNEEGMVGELIAFCTST 52 (78)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHTHHHHSCCCHHHHHHHHTTHHHHT
T ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhc
Confidence 5566666654 4567789999999885 99999999999984
No 146
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=52.75 E-value=58 Score=25.53 Aligned_cols=69 Identities=10% Similarity=0.024 Sum_probs=38.9
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH----------HHHHHHH----------------HHHHHHhhhh
Q 010992 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIA----------EDFVESI----------------TMFGCSLAKH 449 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIA----------DDFVDsV----------------vt~ACrLAKH 449 (496)
.+++..|++..|..+++.++. .++.+..+.|.+.+ ++|+.-+ +..++++.-.
T Consensus 25 ~~~~G~i~~~e~~~~l~~~~~--~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~ 102 (158)
T 2jnf_A 25 PEGSGRVSTDQIGIILEVLGI--QQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDK 102 (158)
T ss_dssp SSSCSSEEHHHHHHHHHHTTC--SCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTSSTHHHHHHHHCS
T ss_pred CCCCCcCcHHHHHHHHHHhCC--CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHHHHHHHHHHHhCC
Confidence 456677888888888887643 34444333333333 3555544 2333333333
Q ss_pred cCCCCcchhhHHHHHhh
Q 010992 450 RKSDTLEAKDILVHLER 466 (496)
Q Consensus 450 RKSdTLEvKDVQLhLER 466 (496)
.+...|+..++.-+|.+
T Consensus 103 d~~G~I~~~el~~~l~~ 119 (158)
T 2jnf_A 103 EGNGYISTDVMREILAE 119 (158)
T ss_dssp SSSSSEEHHHHHHHHHH
T ss_pred CCCCeEcHHHHHHHHHH
Confidence 45556777777766654
No 147
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=52.33 E-value=7.8 Score=39.64 Aligned_cols=59 Identities=20% Similarity=0.296 Sum_probs=40.0
Q ss_pred HHHHhhCCCCCCCHHH-HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 409 ELVNQIDPSERLDPDV-EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 409 ELVrqIDPsesLDpDV-EELLLeIADDF----VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
++++..-....+++++ .+.|.+....| |+++++.|+.+|..++.+.|+.+|+.-.|++.
T Consensus 193 ~Il~~~~~~~~l~~~v~l~~la~~t~G~sgadL~~lv~~Aal~A~~~~~~~I~~~dl~~al~~v 256 (476)
T 2ce7_A 193 KILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRV 256 (476)
T ss_dssp HHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcchhhHHHHHHhcCCCcHHHHHHHHHHHHHHHHHcCCCeecHHHHHHHHHHH
Confidence 3444332333454444 34444444333 57889999999999998999999999999885
No 148
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=52.14 E-value=2 Score=32.08 Aligned_cols=25 Identities=20% Similarity=0.611 Sum_probs=21.0
Q ss_pred cCCCCcchhhHHHHHhhhcCccccC
Q 010992 450 RKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
-|-+.|.+-++...||++||+.|+-
T Consensus 36 lG~DSl~~~el~~~le~~fgi~i~~ 60 (81)
T 2lol_A 36 LKADSLDTVELMMAIEVEYGIDIPD 60 (81)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCCCCG
T ss_pred cCCcHHHHHHHHHHHHHHHCCCCCH
Confidence 4667778888999999999999974
No 149
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=52.04 E-value=18 Score=27.25 Aligned_cols=64 Identities=8% Similarity=0.089 Sum_probs=43.3
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH--HHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIA--EDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIA--DDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
.+++..|.+|++.+|....|+-+ |++.-+. ++- ..-+..++++.-..+...|+.+|+...|.+.
T Consensus 6 ~~t~~e~~~~~~~~d~~g~i~~~--ef~~~~~~~~~~-~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 71 (110)
T 1pva_A 6 LLKADDIKKALDAVKAEGSFNHK--KFFALVGLKAMS-ANDVKKVFKAIDADASGFIEEEELKFVLKSF 71 (110)
T ss_dssp HSCHHHHHHHHHHTCSTTCCCHH--HHHHHHTCTTSC-HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT
T ss_pred cCCHHHHHHHHHhcCCCCcCcHH--HHHHHHccCcch-HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 36889999999999977777753 3332221 111 2334566666666777789999998888764
No 150
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=51.90 E-value=37 Score=28.83 Aligned_cols=72 Identities=17% Similarity=0.339 Sum_probs=43.3
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH---------HHHHHH-----------HHHHHHHHhhhhcCCCC
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI---------AEDFVE-----------SITMFGCSLAKHRKSDT 454 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI---------ADDFVD-----------sVvt~ACrLAKHRKSdT 454 (496)
+.+++..|++..|.++++.++. ..-+.++++++..+ .+||+. +.+..++++.-..++..
T Consensus 67 D~d~~G~Is~~El~~~l~~~g~-~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~ 145 (197)
T 3pm8_A 67 DVDNSGTLSSQEILDGLKKIGY-QKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGK 145 (197)
T ss_dssp CTTCSSEECHHHHHHHHHHHC-----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSE
T ss_pred CCCCCCcCCHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCC
Confidence 4567778888888888888743 23344555554433 245654 34555666665667777
Q ss_pred cchhhHHHHHhhh
Q 010992 455 LEAKDILVHLERN 467 (496)
Q Consensus 455 LEvKDVQLhLERn 467 (496)
|+..++.-.|...
T Consensus 146 Is~~El~~~l~~~ 158 (197)
T 3pm8_A 146 ISVEELKRIFGRD 158 (197)
T ss_dssp ECHHHHHHHHC--
T ss_pred CCHHHHHHHHHhc
Confidence 8888887777653
No 151
>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1
Probab=51.10 E-value=1.8 Score=35.52 Aligned_cols=24 Identities=8% Similarity=0.429 Sum_probs=21.0
Q ss_pred cCCCCcchhhHHHHHhhhcCcccc
Q 010992 450 RKSDTLEAKDILVHLERNWNMTLP 473 (496)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IP 473 (496)
-|-+.|++-+|.+.||++||+.||
T Consensus 53 lGlDSL~~veLv~~lE~~fgI~i~ 76 (105)
T 2jq4_A 53 AGLSSFASVQLMLGIEEAFDIEFP 76 (105)
T ss_dssp GTCCHHHHHHHHHHHHHHHSCCCC
T ss_pred cCCCHHHHHHHHHHHHHHHCCCcC
Confidence 467788899999999999999997
No 152
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=50.73 E-value=23 Score=28.26 Aligned_cols=30 Identities=0% Similarity=-0.067 Sum_probs=19.9
Q ss_pred HHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 438 SITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 438 sVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
..+..+.++.-..+...|+..++.-.|...
T Consensus 94 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~ 123 (174)
T 1q80_A 94 GPLPLFFRAVDTNEDNNISRDEYGIFFGML 123 (174)
T ss_dssp THHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHc
Confidence 344455555555667778888887777664
No 153
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=50.61 E-value=43 Score=26.77 Aligned_cols=49 Identities=8% Similarity=0.130 Sum_probs=29.5
Q ss_pred CCccCCHHHHHHHHHhhCCCC---CC-CHHHHHHHHHH---------HHHHHHHHHHHHHHh
Q 010992 398 GNRILTKRSIQELVNQIDPSE---RL-DPDVEDILVDI---------AEDFVESITMFGCSL 446 (496)
Q Consensus 398 ~nrILtKrKLqELVrqIDPse---sL-DpDVEELLLeI---------ADDFVDsVvt~ACrL 446 (496)
+...|++..|..+++..-+.. .+ +.+|+++|.++ -+|||.-+...+..+
T Consensus 27 ~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~~~~ 88 (100)
T 3nxa_A 27 VKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGITGPI 88 (100)
T ss_dssp CTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHHGGG
T ss_pred CCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 357899999999998753321 11 34566666554 356776655544433
No 154
>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}
Probab=50.49 E-value=3.9 Score=30.14 Aligned_cols=26 Identities=15% Similarity=0.472 Sum_probs=20.2
Q ss_pred hcCCCCcchhhHHHHHhhhcCccccC
Q 010992 449 HRKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 449 HRKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
.-|-+.|.+-++...||+.||+.|+-
T Consensus 34 ~lG~DSl~~~~l~~~le~~fgi~i~~ 59 (80)
T 1x3o_A 34 DLGADSLDTVELIMGLEDEFGLEISD 59 (80)
T ss_dssp TTCCCHHHHHHHHHHHHHHHCCCCCH
T ss_pred hcCccHHHHHHHHHHHHHHHCCCcCH
Confidence 34556677788889999999999863
No 155
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=50.15 E-value=42 Score=27.68 Aligned_cols=68 Identities=16% Similarity=0.236 Sum_probs=41.4
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH---------HHHHHHH----------HHHHHHHhhhhcCCCCc
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI---------AEDFVES----------ITMFGCSLAKHRKSDTL 455 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI---------ADDFVDs----------Vvt~ACrLAKHRKSdTL 455 (496)
+.+++..|++..|..+++.++-. +.++++++..+ .+||+.- .+..++++.-..+...|
T Consensus 49 D~d~~G~i~~~El~~~l~~~g~~---~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I 125 (180)
T 3mse_B 49 DTNHNGSLSHREIYTVLASVGIK---KWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTFLKAAFNKIDKDEDGYI 125 (180)
T ss_dssp CTTCSSSEEHHHHHHHHHHTTCC---HHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC--CHHHHHHHHHCTTCSSCB
T ss_pred CCCCCCcCCHHHHHHHHHHcCCC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCHHHHHHHHHHHCCCCCCCC
Confidence 45667788888888888877532 24455554443 3566652 33445554444556667
Q ss_pred chhhHHHHHh
Q 010992 456 EAKDILVHLE 465 (496)
Q Consensus 456 EvKDVQLhLE 465 (496)
+..++.-.|.
T Consensus 126 ~~~El~~~l~ 135 (180)
T 3mse_B 126 SKSDIVSLVH 135 (180)
T ss_dssp CHHHHHHHTT
T ss_pred CHHHHHHHHc
Confidence 7777766666
No 156
>3n1e_A Vacuolar protein sorting-associated protein 54; spinal muscular atrophy, vesicle trafficking, golgi apparatu tethering complex, GARP.; 1.70A {Mus musculus} PDB: 3n1b_A
Probab=49.93 E-value=35 Score=30.53 Aligned_cols=70 Identities=10% Similarity=0.144 Sum_probs=48.8
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCC---cchhhHHHHHhhhcCccccCCCccccc
Q 010992 406 SIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDT---LEAKDILVHLERNWNMTLPGFSGDEIK 481 (496)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdT---LEvKDVQLhLERnWNI~IPGFssDEIr 481 (496)
+|++.|..| --+++|+.++..+-..|-+...+.-.++.-...... +-+.||.|+.++- -.|.||+..|+.
T Consensus 63 kLH~~Ls~~----LP~~~v~~Im~~Vf~~fk~~l~~~~~~~~i~~~~G~q~g~v~~Dv~ff~~~L--~~L~g~~d~~l~ 135 (141)
T 3n1e_A 63 KMHEAIFDL----LPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNL--QALKGLKDLDLN 135 (141)
T ss_dssp HHHHHHTTT----SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSSHHHHHHHHHHHHHHHHH--HTSTTCTTCCCC
T ss_pred HHHHHHHhh----CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcccchHHHHHHHHHHHHh--cccCCCCccccc
Confidence 344444433 234559999999999999999887777654333332 2369999999986 356788887765
No 157
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=49.66 E-value=19 Score=27.23 Aligned_cols=65 Identities=14% Similarity=0.173 Sum_probs=39.7
Q ss_pred ccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH--HHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 400 RILTKRSIQELVNQIDPSERLDPDVEDILVDIA--EDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 400 rILtKrKLqELVrqIDPsesLDpDVEELLLeIA--DDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
..+++..|.+|++++|....|+-+ |++.-+. .+- ..-+..+.++.-..+...|+.+|+.-.|.+.
T Consensus 4 ~~~~~~e~~~l~~~~d~~g~i~~~--eF~~~~~~~~~~-~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 70 (108)
T 2kyc_A 4 DILSPSDIAAALRDCQAPDSFSPK--KFFQISGMSKKS-SSQLKEIFRILDNDQSGFIEEDELKYFLQRF 70 (108)
T ss_dssp SSSCHHHHHHHHTTSCSTTTCCHH--HHHHHHTCTTCC-SSSHHHHCSSSCSCCSSCCCGGGTTTSHHHH
T ss_pred ccCCHHHHHHHHHHcCCCCcCCHH--HHHHHHhhCccc-HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence 357899999999999977777743 2222111 000 1123345555545566678888887777764
No 158
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=49.07 E-value=33 Score=25.65 Aligned_cols=27 Identities=7% Similarity=0.097 Sum_probs=18.1
Q ss_pred HHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 440 TMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 440 vt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+..+.+..-..+...|+..++.-.|.+
T Consensus 77 ~~~~f~~~D~d~~G~i~~~e~~~~l~~ 103 (134)
T 1jfj_A 77 LKVLYKLMDVDGDGKLTKEEVTSFFKK 103 (134)
T ss_dssp HHHHHHHHCCSSSSEEEHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCCccCHHHHHHHHHH
Confidence 445555555566677888888777764
No 159
>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma}
Probab=48.86 E-value=0.72 Score=38.13 Aligned_cols=27 Identities=22% Similarity=0.505 Sum_probs=22.0
Q ss_pred hhcCCCCcchhhHHHHHhhhcCccccC
Q 010992 448 KHRKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 448 KHRKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
..-+-+.|++-+|.+.||+.||+.|+-
T Consensus 51 ~dLglDSL~~veli~~lE~~fgi~i~~ 77 (107)
T 3ce7_A 51 EDRLWDCLDTVEFVLDVEEIFDVTVPD 77 (107)
T ss_dssp TSSBCCHHHHHHHHHHHHHHHTCCCCH
T ss_pred cccCCCHHHHHHHHHHHHHHHCCCCCH
Confidence 344677788888999999999999974
No 160
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=48.75 E-value=12 Score=35.45 Aligned_cols=83 Identities=8% Similarity=0.079 Sum_probs=51.0
Q ss_pred CHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHH----HHHHHHHhhhhc------------CCCCcchhhHHHHH
Q 010992 403 TKRSIQELVNQID--PSERLDPDVEDILVDIAEDFVES----ITMFGCSLAKHR------------KSDTLEAKDILVHL 464 (496)
Q Consensus 403 tKrKLqELVrqID--PsesLDpDVEELLLeIADDFVDs----Vvt~ACrLAKHR------------KSdTLEvKDVQLhL 464 (496)
+.+...++++.+- -...+++++.+.|.+.++.|... ++..|+..|.++ ....|+.+|+.-.|
T Consensus 252 ~~~~r~~il~~~~~~~~~~l~~~~l~~la~~t~G~s~~dl~~l~~~a~~~~ir~l~~~~~~~~~~~~~~~i~~~d~~~al 331 (357)
T 3d8b_A 252 EASARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIRSLQTADIATITPDQVRPIAYIDFENAF 331 (357)
T ss_dssp CHHHHHHHHHHHHHTSCBCCCHHHHHHHHHHTTTCCHHHHHHHHHHHHTHHHHHCCC----------CCCBCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcCCCccHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhhhhhccccccccCCcCHHHHHHHH
Confidence 4455555554442 23468888888888877765544 444444333332 23468888998888
Q ss_pred hhhcCccccCCCcccccccCCcccc
Q 010992 465 ERNWNMTLPGFSGDEIKTFRKPVRI 489 (496)
Q Consensus 465 ERnWNI~IPGFssDEIr~~rk~~~~ 489 (496)
++. .|....++++.|.++...
T Consensus 332 ~~~----~ps~~~~~~~~~~~~~~~ 352 (357)
T 3d8b_A 332 RTV----RPSVSPKDLELYENWNKT 352 (357)
T ss_dssp HHH----GGGCCCCCHHHHHHHHHH
T ss_pred Hhc----CCCCCHHHHHHHHHHHHH
Confidence 764 355677788877766544
No 161
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=48.72 E-value=25 Score=31.17 Aligned_cols=62 Identities=13% Similarity=0.083 Sum_probs=40.6
Q ss_pred CCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 402 LTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 402 LtKrKLqELVrqID--PsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
++.+.+.++++++- .+..+|+++.+.|.+.++.-+..++....+++.. ...|+.+||.-++.
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~i~~~~l~~l~~~~~G~~r~~~~~l~~~~~~--~~~i~~~~v~~~~~ 224 (319)
T 2chq_A 161 VPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAI--GEVVDADTIYQITA 224 (319)
T ss_dssp CCHHHHHHHHHHHHHTTCCCBCHHHHHHHHHTTTTCHHHHHHHHHHHHHS--SSCBCHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHc--CCCCCHHHHHHHHC
Confidence 46677777777653 3457899999998888776666666655555543 23567777754443
No 162
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=48.69 E-value=45 Score=34.88 Aligned_cols=49 Identities=8% Similarity=0.137 Sum_probs=36.4
Q ss_pred CCHHHHHHHHHhhCC------CCCCCHHHHHHHHHHHHHHH---------HHHHHHHHHhhhhc
Q 010992 402 LTKRSIQELVNQIDP------SERLDPDVEDILVDIAEDFV---------ESITMFGCSLAKHR 450 (496)
Q Consensus 402 LtKrKLqELVrqIDP------sesLDpDVEELLLeIADDFV---------DsVvt~ACrLAKHR 450 (496)
.+...+.++++.+-. +..+++++.+.+.++++.|+ -+++..||..++.+
T Consensus 325 p~~~~~~~il~~~~~~~~~~~~~~i~~~al~~~~~~s~~~i~~~~~p~~ai~ll~~a~~~~~~~ 388 (758)
T 3pxi_A 325 PSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLR 388 (758)
T ss_dssp CCHHHHHHHHHHTTTTSGGGSSCSCCHHHHHHHHHHHHHSSCCSCTTHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcccccCcCCcHHHHHHHHHHHHHHhh
Confidence 467778888886643 35799999999999998774 35677777766554
No 163
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=48.28 E-value=1e+02 Score=24.73 Aligned_cols=71 Identities=11% Similarity=0.122 Sum_probs=40.4
Q ss_pred CcCCccCCHHHHHHHHHhhCCC---CCCCHHHHHHHHHHH----------HHHHH-----HHHHHHHHhhhhcCCCCcch
Q 010992 396 EFGNRILTKRSIQELVNQIDPS---ERLDPDVEDILVDIA----------EDFVE-----SITMFGCSLAKHRKSDTLEA 457 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPs---esLDpDVEELLLeIA----------DDFVD-----sVvt~ACrLAKHRKSdTLEv 457 (496)
.+++..|++..|..+++.+... ..+.++..+.|...+ +||+. ..+..+.++.-..+...|+.
T Consensus 12 ~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~ 91 (167)
T 1gjy_A 12 AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSDRSGTVDP 91 (167)
T ss_dssp CCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHHHHHHHHHHHCTTCCSEECH
T ss_pred cCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCCH
Confidence 4455566777777777666431 133333333333332 24443 23445556666667778999
Q ss_pred hhHHHHHhh
Q 010992 458 KDILVHLER 466 (496)
Q Consensus 458 KDVQLhLER 466 (496)
+++.-.|+.
T Consensus 92 ~el~~~l~~ 100 (167)
T 1gjy_A 92 QELQKALTT 100 (167)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999888875
No 164
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=47.96 E-value=6.9 Score=37.04 Aligned_cols=76 Identities=14% Similarity=0.173 Sum_probs=54.3
Q ss_pred cCCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHH----HHhhhhcCCCCcchhhHHHHHhhhcCccccCC
Q 010992 401 ILTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFG----CSLAKHRKSDTLEAKDILVHLERNWNMTLPGF 475 (496)
Q Consensus 401 ILtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvt~A----CrLAKHRKSdTLEvKDVQLhLERnWNI~IPGF 475 (496)
-|.-.+...+++.|. .-.++|++-.+...+=++.|+..+-... ..|+..++...|..-|.--||.|.||+.+=|+
T Consensus 135 Wldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~ 214 (291)
T 1pq4_A 135 WLSPTLVKRQATTIAKELAELDPDNRDQYEANLAAFLAELERLNQELGQILQPLPQRKFIVFHPSWAYFARDYNLVQIPI 214 (291)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCEEEESSCCCHHHHHHTTCEEEES
T ss_pred cCCHHHHHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEECCchHHHHHHCCCEEeec
Confidence 356666666776663 3346788877888888888887765433 34566666667889999999999999987555
Q ss_pred C
Q 010992 476 S 476 (496)
Q Consensus 476 s 476 (496)
-
T Consensus 215 ~ 215 (291)
T 1pq4_A 215 E 215 (291)
T ss_dssp C
T ss_pred c
Confidence 4
No 165
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=47.95 E-value=11 Score=38.37 Aligned_cols=62 Identities=8% Similarity=0.047 Sum_probs=40.5
Q ss_pred HHHHHHHhhCCCCCCCHHH-HHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 406 SIQELVNQIDPSERLDPDV-EDILVDIAED----FVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 406 KLqELVrqIDPsesLDpDV-EELLLeIADD----FVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
.-.++++..-.+..+++|+ .+.|.+.++. -|..||..|+.+|-.++...|+.+|+...|+|-
T Consensus 323 ~R~~Il~~~~~~~~l~~dvdl~~lA~~t~G~SGADi~~l~~eA~~~Air~~~~~vt~~Df~~Al~~v 389 (405)
T 4b4t_J 323 ARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKV 389 (405)
T ss_dssp HHHHHHHHHHTTSBCCSSCCHHHHHHHCCSCCHHHHHHHHHHHHHHHHHTTCSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCccCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHH
Confidence 3334444333334444443 2334444332 378899999999988888899999999999875
No 166
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=47.06 E-value=78 Score=25.06 Aligned_cols=73 Identities=14% Similarity=0.250 Sum_probs=42.2
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCH-HHHHHHHHH---------HHHHHHHH------------HHHHHHhhhhcCC
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDP-DVEDILVDI---------AEDFVESI------------TMFGCSLAKHRKS 452 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDp-DVEELLLeI---------ADDFVDsV------------vt~ACrLAKHRKS 452 (496)
+.+++..|++..|..+++.++. .++. ++++++..+ .++|+.-+ +..+++..-..+.
T Consensus 38 D~d~~G~i~~~el~~~l~~~~~--~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~ 115 (169)
T 3qrx_A 38 DTDGSGTIDAKELKVAMRALGF--EPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNS 115 (169)
T ss_dssp CTTCCSEECHHHHHHHHHHTSC--CCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCS
T ss_pred CCCCCCcCcHHHHHHHHHHcCC--CCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCCCC
Confidence 3455667777777777776632 2333 333333322 23454433 3345555555677
Q ss_pred CCcchhhHHHHHhhhcCc
Q 010992 453 DTLEAKDILVHLERNWNM 470 (496)
Q Consensus 453 dTLEvKDVQLhLERnWNI 470 (496)
..|+..++.-.|++ +|.
T Consensus 116 G~i~~~el~~~l~~-~g~ 132 (169)
T 3qrx_A 116 GTITIKDLRRVAKE-LGE 132 (169)
T ss_dssp SSBCHHHHHHHHHH-TTC
T ss_pred CcCCHHHHHHHHHH-cCC
Confidence 78999999888875 343
No 167
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=46.97 E-value=12 Score=29.68 Aligned_cols=73 Identities=8% Similarity=0.016 Sum_probs=41.1
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH--------HHHHHHHH--------------HHHHHHhhhhcCCC
Q 010992 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI--------AEDFVESI--------------TMFGCSLAKHRKSD 453 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI--------ADDFVDsV--------------vt~ACrLAKHRKSd 453 (496)
.+++..|++..|..+++.++.. .-+.++++++..+ -++|+.-+ +..++++.-..+..
T Consensus 22 ~d~~G~i~~~el~~~l~~lg~~-~~~~~~~~l~~~~d~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G 100 (159)
T 2ovk_C 22 DGRDGDVDAAKVGDLLRCLGMN-PTEAQVHQHGGTKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQG 100 (159)
T ss_dssp TTSSSEEEGGGHHHHHHHTTCC-CCHHHHHHTTCCSSTTSCEEEHHHHHHHHHHHTTCSTTCCHHHHHHHHHHTCTTSSS
T ss_pred CCCCCCCcHHHHHHHHHHcCCC-CCHHHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhccCCCcHHHHHHHHHHHCCCCCC
Confidence 4556677777777777776432 1122333333222 23444333 44556665556677
Q ss_pred CcchhhHHHHHhhhcCc
Q 010992 454 TLEAKDILVHLERNWNM 470 (496)
Q Consensus 454 TLEvKDVQLhLERnWNI 470 (496)
.|+..++.-+|.+ +|.
T Consensus 101 ~I~~~El~~~l~~-~g~ 116 (159)
T 2ovk_C 101 LISSAEIRNVLKM-LGE 116 (159)
T ss_dssp EECHHHHHHHHHH-SSS
T ss_pred cCcHHHHHHHHHH-hCC
Confidence 8888888888875 443
No 168
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=46.83 E-value=42 Score=26.24 Aligned_cols=61 Identities=8% Similarity=0.152 Sum_probs=34.3
Q ss_pred HHHHHHhhCCC--CCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcC
Q 010992 407 IQELVNQIDPS--ERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWN 469 (496)
Q Consensus 407 LqELVrqIDPs--esLDpD-VEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWN 469 (496)
|.++.+.+|.+ ..|+.+ ...+|..+. .-+..+...++.+-..+...|+..+..-.|.+.|+
T Consensus 100 ~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~ 163 (166)
T 3akb_A 100 LHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDGKVGETEIVPAFARYFT 163 (166)
T ss_dssp HHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSBCCHHHHHHHHHHHTS
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhc
Confidence 66666666543 345544 333333321 22233333344444466778999999888888776
No 169
>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*
Probab=46.59 E-value=3.6 Score=30.86 Aligned_cols=26 Identities=19% Similarity=0.419 Sum_probs=22.0
Q ss_pred cCCCCcchhhHHHHHhhhcCccccCC
Q 010992 450 RKSDTLEAKDILVHLERNWNMTLPGF 475 (496)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPGF 475 (496)
-|-+.|.+-+|...||+.||+.|+-.
T Consensus 34 lG~DSl~~vel~~~le~~fgi~i~~~ 59 (82)
T 2ava_A 34 LGADSLDTVEIVMNLEEEFGINVDED 59 (82)
T ss_dssp CTTCCSCHHHHHHHHHHHTTCCCCGG
T ss_pred cCCCHHHHHHHHHHHHHHHCCccCHH
Confidence 45678889999999999999999743
No 170
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=46.55 E-value=24 Score=31.31 Aligned_cols=63 Identities=13% Similarity=0.058 Sum_probs=40.3
Q ss_pred cCCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 401 ILTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 401 ILtKrKLqELVrqID--PsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
-++.+.+.++++++- .+..+|+++.+.|.++++--+..++....+++... ..++.+||.-.+.
T Consensus 165 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~G~~r~a~~~l~~~~~~~--~~i~~~~v~~~~~ 229 (323)
T 1sxj_B 165 KLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGH--GLVNADNVFKIVD 229 (323)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTTCHHHHHHHHHHHHHHH--SSBCHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--CCcCHHHHHHHHC
Confidence 346777777777652 24568999999999998765655555555554332 3466666654443
No 171
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=46.32 E-value=31 Score=34.32 Aligned_cols=64 Identities=9% Similarity=0.154 Sum_probs=44.5
Q ss_pred CCHHHHHHHHHhhCC------CCCCCHHHHHHHHHHHHHHHH---------HHHHHHHHhhhhcCCC-CcchhhHHHHHh
Q 010992 402 LTKRSIQELVNQIDP------SERLDPDVEDILVDIAEDFVE---------SITMFGCSLAKHRKSD-TLEAKDILVHLE 465 (496)
Q Consensus 402 LtKrKLqELVrqIDP------sesLDpDVEELLLeIADDFVD---------sVvt~ACrLAKHRKSd-TLEvKDVQLhLE 465 (496)
.+...+.++++.+-. +..|++++.+.+.++++.|+. +++..+|..++.+... .-+++++.-.|+
T Consensus 325 p~~e~~~~iL~~~~~~~~~~~~~~i~~~al~~l~~~s~~~~~~~~lp~~ai~ll~~a~~~~~~~~~~~p~~i~~l~~~i~ 404 (468)
T 3pxg_A 325 PSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLD 404 (468)
T ss_dssp CCHHHHHHHHHHTTTTSGGGSSCSCCHHHHHHHHHHHHHSSCCSCTTHHHHHHHHHHHHHHHHHTTSCCSSTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCcCCcHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Confidence 367777888887643 457999999999999998763 4677788877776543 234555443333
No 172
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=46.24 E-value=63 Score=26.20 Aligned_cols=28 Identities=11% Similarity=-0.032 Sum_probs=20.3
Q ss_pred HHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 440 TMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 440 vt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+..+.++.-..+...|+.+++.-.|+..
T Consensus 79 ~~~~F~~~D~d~~G~i~~~el~~~l~~~ 106 (173)
T 1alv_A 79 WQAIYKQFDVDRSGTIGSSELPGAFEAA 106 (173)
T ss_dssp HHHHHHHHCTTCCSSBCTTTHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHc
Confidence 4556666666677789999998888653
No 173
>3cjh_B Mitochondrial import inner membrane translocase S TIM8; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}
Probab=46.04 E-value=76 Score=24.18 Aligned_cols=48 Identities=17% Similarity=0.239 Sum_probs=38.8
Q ss_pred CCHHHHHHHHHhh----------C-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 010992 402 LTKRSIQELVNQI----------D-PSERLDPDVEDILVDIAEDFVESITMFGCSLAKH 449 (496)
Q Consensus 402 LtKrKLqELVrqI----------D-PsesLDpDVEELLLeIADDFVDsVvt~ACrLAKH 449 (496)
+-+.++++|+.+| + ++..||..-+.=|...+|.|+|.-..-+-++++.
T Consensus 5 ~~~~~~~~~~~~lt~~Cf~kCv~~~~~~~L~~~E~~Ci~~Cv~ky~~~~~~v~~~~~~~ 63 (64)
T 3cjh_B 5 NSKQKVQMSIHQFTNICFKKCVESVNDSNLSSQEEQCLSNCVNRFLDTNIRIVNGLQNT 63 (64)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCCCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccCCCCcCChhHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4578888888887 4 6778999999999999999999876666666654
No 174
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=46.02 E-value=39 Score=27.32 Aligned_cols=27 Identities=7% Similarity=-0.021 Sum_probs=19.1
Q ss_pred HHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 440 TMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 440 vt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+..+.++.-..+...|+.+++.-.|..
T Consensus 76 ~~~~F~~~D~d~~G~i~~~el~~~l~~ 102 (172)
T 2znd_A 76 WQNVFRTYDRDNSGMIDKNELKQALSG 102 (172)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCccCHHHHHHHHHH
Confidence 445555555567778999999888865
No 175
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=45.76 E-value=53 Score=29.68 Aligned_cols=47 Identities=21% Similarity=0.275 Sum_probs=39.7
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 010992 406 SIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKS 452 (496)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKS 452 (496)
.|+.|+..-++..-++.|+.+++.+=-++|...|-....+.|+....
T Consensus 113 ~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~~~ 159 (201)
T 3k9o_A 113 SLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVS 159 (201)
T ss_dssp HHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcccccc
Confidence 46677777688889999999999999999999999999999986543
No 176
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=45.69 E-value=8 Score=37.08 Aligned_cols=75 Identities=13% Similarity=0.225 Sum_probs=53.0
Q ss_pred cCCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHH----HHhhhhcCCCCcchhhHHHHHhhhcCccccCC
Q 010992 401 ILTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFG----CSLAKHRKSDTLEAKDILVHLERNWNMTLPGF 475 (496)
Q Consensus 401 ILtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvt~A----CrLAKHRKSdTLEvKDVQLhLERnWNI~IPGF 475 (496)
-|.-.+...+++.|. .-.++|++-.+...+=++.|++.+-... -.|++.++...|...|.--||.|.||+.+=|+
T Consensus 135 Wldp~n~~~~a~~I~~~L~~~DP~~a~~Y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yfa~~yGl~~~~~ 214 (312)
T 2o1e_A 135 WLSPVLAQKEVKNITAQIVKQDPDNKEYYEKNSKEYIAKLQDLDKLYRTTAKKAEKKEFITQHTAFGYLAKEYGLKQVPI 214 (312)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCEEEESSCTTHHHHHHTTCEEEEC
T ss_pred ccCHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEECCchHHHHHHCCCeEEEe
Confidence 345666666666663 3346777777777777777777665432 34666666678889999999999999987655
No 177
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=45.49 E-value=54 Score=34.11 Aligned_cols=75 Identities=8% Similarity=0.226 Sum_probs=44.8
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH---------HHHHHHHH------------HHHHHHhhhhcCCC
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI---------AEDFVESI------------TMFGCSLAKHRKSD 453 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI---------ADDFVDsV------------vt~ACrLAKHRKSd 453 (496)
|.+++..|++..|.++++.++-. .-+.|+++++.++ .+||+.-+ +..|.++--..++.
T Consensus 312 DkDgdG~IS~eELk~aLrsLG~~-~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~fDkDgdG 390 (440)
T 3u0k_A 312 DKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNG 390 (440)
T ss_dssp CTTCSSEECHHHHHHHHHHTTCC-CCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHHHHCTTCSS
T ss_pred cCCCCCEECHHHHHHHHHHcCCC-CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCcC
Confidence 44677788888888888887432 2234566655544 35665433 33344444444566
Q ss_pred CcchhhHHHHHhhhcCcc
Q 010992 454 TLEAKDILVHLERNWNMT 471 (496)
Q Consensus 454 TLEvKDVQLhLERnWNI~ 471 (496)
.|++.|+.-.|++ +|..
T Consensus 391 ~IS~eELr~vL~~-lGe~ 407 (440)
T 3u0k_A 391 YISAAELRHVMTN-LGEK 407 (440)
T ss_dssp EECHHHHHHHHHH-HTCC
T ss_pred cCCHHHHHHHHHH-hCCC
Confidence 7888888777764 3443
No 178
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=45.30 E-value=31 Score=28.82 Aligned_cols=34 Identities=15% Similarity=0.348 Sum_probs=19.5
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH
Q 010992 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI 431 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI 431 (496)
.+++..|++..|..+++.++ ..|+++-.+.|++.
T Consensus 96 ~d~~G~I~~~el~~~l~~~g--~~ls~~e~~~l~~~ 129 (159)
T 3i5g_C 96 REGQGLISSAEIRNVLKMLG--ERITEDQCNDIFTF 129 (159)
T ss_dssp TTSSSEECHHHHHHHHHHSS--SCCCHHHHHHHHHH
T ss_pred cCCCCcCcHHHHHHHHHHhC--CCCCHHHHHHHHHH
Confidence 45666777777777777663 34555433333333
No 179
>1tjl_A DNAK suppressor protein; DKSA, transcription factor, RNA polymerase, stringent response, PPGPP, riken structural genomics/proteomics initiative; 2.00A {Escherichia coli} SCOP: a.2.14.1 g.39.1.13 PDB: 3h3p_S
Probab=45.29 E-value=11 Score=33.70 Aligned_cols=29 Identities=21% Similarity=0.096 Sum_probs=18.7
Q ss_pred chhhHHHHHhhhcCccccCCCcccccccCCcccccCCCCCC
Q 010992 456 EAKDILVHLERNWNMTLPGFSGDEIKTFRKPVRIVTDPIPL 496 (496)
Q Consensus 456 EvKDVQLhLERnWNI~IPGFssDEIr~~rk~~~~~~d~~~~ 496 (496)
++++|.-+|+|- +-..|. .|.+||+|||+
T Consensus 95 ~L~~i~~Al~ri-----------~~g~yg-~C~~Cg~~Ip~ 123 (151)
T 1tjl_A 95 LIKKIEKTLKKV-----------EDEDFG-YCESCGVEIGI 123 (151)
T ss_dssp HHHHHHHHHHHH-----------HTTCCS-BCSSSSCBCCH
T ss_pred HHHHHHHHHHHH-----------hCCCCc-eeCCCCCcchH
Confidence 356677777773 112332 58999999983
No 180
>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}
Probab=44.99 E-value=2.1 Score=35.44 Aligned_cols=29 Identities=14% Similarity=0.363 Sum_probs=23.0
Q ss_pred hhhhcCC-CCcchhhHHHHHhhhcCccccC
Q 010992 446 LAKHRKS-DTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 446 LAKHRKS-dTLEvKDVQLhLERnWNI~IPG 474 (496)
|..--+- |.|++-+|.+.||++||+.|+-
T Consensus 52 L~~dLGl~DSL~~veLi~~lE~~FgI~I~~ 81 (105)
T 2lki_A 52 LLGNIPELDSMAVVNVITALEEYFDFSVDD 81 (105)
T ss_dssp CBTTBTTCCHHHHHHHHHHHHHHHTSCCCG
T ss_pred hhhhcCcccHHHHHHHHHHHHHHhCCCcCH
Confidence 3333456 7788899999999999999974
No 181
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=44.85 E-value=21 Score=33.70 Aligned_cols=72 Identities=11% Similarity=0.178 Sum_probs=51.1
Q ss_pred CCHHHHHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHH----Hhhhh--cCCCCcchhhHHHHHhhhcCcccc
Q 010992 402 LTKRSIQELVNQI-DPSERLDPDVEDILVDIAEDFVESITMFGC----SLAKH--RKSDTLEAKDILVHLERNWNMTLP 473 (496)
Q Consensus 402 LtKrKLqELVrqI-DPsesLDpDVEELLLeIADDFVDsVvt~AC----rLAKH--RKSdTLEvKDVQLhLERnWNI~IP 473 (496)
|.-.....+++.| |.-.++|++-.+...+=+++|+..+-...- +|++. ++...|..-|.--||.|.||+.+=
T Consensus 107 ldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~ld~~~~~~l~~~~~~~~~~vt~H~af~Y~~~~yGl~~~ 185 (282)
T 3mfq_A 107 FSIPLYKSAVAVASEELQKLLPAKAEMIQKNTEKYQAQLDDLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLY 185 (282)
T ss_dssp GSHHHHHHHHHHHHHHHTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCEEECSSSCCHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCcEEEEECchHHHHHHHCCCeEe
Confidence 5667777777777 345689999888888888889888755433 34543 233345567887899999998853
No 182
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A*
Probab=44.24 E-value=18 Score=35.83 Aligned_cols=77 Identities=18% Similarity=0.239 Sum_probs=45.2
Q ss_pred HHHHHHhhCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cchhhHHHHHhh-----hcC--ccccCCCc
Q 010992 407 IQELVNQIDPSERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDT-LEAKDILVHLER-----NWN--MTLPGFSG 477 (496)
Q Consensus 407 LqELVrqIDPsesLDpD-VEELLLeIADDFVDsVvt~ACrLAKHRKSdT-LEvKDVQLhLER-----nWN--I~IPGFss 477 (496)
+.++++++-.+..|+.| +++++-+|.|.=+.++--.|+.+|-+-|.++ =|+..+...+.. .|. +.+.|.|+
T Consensus 3 ~~~~i~k~~~g~~Lt~eEa~~~~~~i~~g~~~~~QiaAfL~alr~kget~eEiag~~~am~~~~~~~~~~~~vD~~gTGG 82 (345)
T 1o17_A 3 INEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKIDVPNAIDTAGTGG 82 (345)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCCTTCEECCC---
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCCCCceeeCCCCC
Confidence 45667666555666654 8888888888888888888888884444443 333333322222 232 55778888
Q ss_pred cccccc
Q 010992 478 DEIKTF 483 (496)
Q Consensus 478 DEIr~~ 483 (496)
|-.++|
T Consensus 83 dg~~tf 88 (345)
T 1o17_A 83 DGLGTV 88 (345)
T ss_dssp -CCCBC
T ss_pred CCCCcc
Confidence 866554
No 183
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=44.15 E-value=34 Score=26.09 Aligned_cols=63 Identities=8% Similarity=0.137 Sum_probs=31.7
Q ss_pred CHHHHHHHHHhhCCC--CCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 403 TKRSIQELVNQIDPS--ERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 403 tKrKLqELVrqIDPs--esLDpD-VEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
.+++|.++.+.+|.+ ..|+.+ ..++|..+...+-+..+...++.+-..+...|+..+..-.+.
T Consensus 27 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp CHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 455666666666543 345533 444444443223333333333444444556677777655544
No 184
>4hw4_A Induced myeloid leukemia cell differentiation Pro 1; anti-apoptotic protein, BH3 peptides, apoptosis; 1.53A {Homo sapiens} PDB: 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 2kbw_A 4hw3_A* 4hw2_A* 3d7v_A 3io9_A 2nl9_A* 2nla_A 4g35_A* 1wsx_A 2jm6_B 2roc_A 2rod_A 3mk8_B
Probab=44.01 E-value=15 Score=32.68 Aligned_cols=46 Identities=22% Similarity=0.309 Sum_probs=32.7
Q ss_pred HHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH-H---------HHHHHHhhhhcCCC
Q 010992 405 RSIQELVNQIDPSERLDPDVEDILVDIAEDFVES-I---------TMFGCSLAKHRKSD 453 (496)
Q Consensus 405 rKLqELVrqIDPsesLDpDVEELLLeIADDFVDs-V---------vt~ACrLAKHRKSd 453 (496)
+.+.+|+++++-.. .++.+.+.++||+..+| | +.|++.||+|-...
T Consensus 56 ~~f~~m~~~L~it~---~~a~~~F~~Va~elF~dGi~NWGRIVaLfaFgg~la~~~~~~ 111 (157)
T 4hw4_A 56 TAFQGMLRKLDIKN---EDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHLKTI 111 (157)
T ss_dssp HHHHHHHHHHCCCS---HHHHHHHHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCC---chHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHc
Confidence 45778888876543 35566789999985444 3 78999999976543
No 185
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=43.98 E-value=16 Score=34.41 Aligned_cols=48 Identities=6% Similarity=-0.060 Sum_probs=31.1
Q ss_pred CHHHHHHHHHhhCC--CCCCCHHHHHHHHHHHHHH----HHHHHHHHHHhhhhc
Q 010992 403 TKRSIQELVNQIDP--SERLDPDVEDILVDIAEDF----VESITMFGCSLAKHR 450 (496)
Q Consensus 403 tKrKLqELVrqIDP--sesLDpDVEELLLeIADDF----VDsVvt~ACrLAKHR 450 (496)
+.+...++++.+-. ...++++..+.|.+.++-| |+.++..|+..|-+|
T Consensus 180 ~~~~r~~il~~~l~~~~~~l~~~~l~~la~~t~G~sgadl~~l~~~A~~~a~r~ 233 (322)
T 1xwi_A 180 EPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRK 233 (322)
T ss_dssp CHHHHHHHHHHHHTTCCBCCCHHHHHHHHHTCTTCCHHHHHHHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 45555566655422 2346777777888777766 777888887776654
No 186
>2iie_A Integration HOST factor; DNA kinking, bending, U-turn, intercalation, divalent, metal, recombination/DNA complex; HET: DNA; 2.41A {Escherichia coli} PDB: 2iif_A*
Probab=43.83 E-value=37 Score=31.24 Aligned_cols=20 Identities=25% Similarity=0.436 Sum_probs=15.4
Q ss_pred HHHhhhcCccccCCCccccc
Q 010992 462 VHLERNWNMTLPGFSGDEIK 481 (496)
Q Consensus 462 LhLERnWNI~IPGFssDEIr 481 (496)
-+|++.+.+.|+|||.=+++
T Consensus 80 ~~L~~G~~V~L~GfGtF~v~ 99 (204)
T 2iie_A 80 RALENGEQVKLSGFGNFDLR 99 (204)
T ss_dssp HHHHTTCEEEETTTEEEEEE
T ss_pred HHHhCCCeEEecCCEEEEEE
Confidence 45666777899999987765
No 187
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=43.64 E-value=36 Score=25.52 Aligned_cols=21 Identities=0% Similarity=0.037 Sum_probs=12.6
Q ss_pred hhhcCCCCcchhhHHHHHhhh
Q 010992 447 AKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 447 AKHRKSdTLEvKDVQLhLERn 467 (496)
+-..+...|+..+..-.+.+.
T Consensus 70 ~D~d~dg~I~~~EF~~~~~~~ 90 (91)
T 2pmy_A 70 LDADRDGAITFQEFARGFLGS 90 (91)
T ss_dssp HCTTCSSEECHHHHTHHHHHT
T ss_pred hCCCCCCCEeHHHHHHHHHHH
Confidence 333455567777776666554
No 188
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=43.24 E-value=55 Score=26.19 Aligned_cols=75 Identities=8% Similarity=0.196 Sum_probs=42.4
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH---------HHHHHH------------HHHHHHHHhhhhcCCC
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI---------AEDFVE------------SITMFGCSLAKHRKSD 453 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI---------ADDFVD------------sVvt~ACrLAKHRKSd 453 (496)
+.+++..|++..|..+++.+... ..+.++.+++..+ .++|+. +.+..+.++.-.-++.
T Consensus 20 D~d~~G~I~~~El~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 98 (148)
T 2lmt_A 20 DKEGTGKIATRELGTLMRTLGQN-PTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDG 98 (148)
T ss_dssp HCSSCCEEEGGGHHHHHHHHTCC-CCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSS
T ss_pred cCCCCCeECHHHHHHHHHhcCCC-chHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcC
Confidence 34566677777777777766432 2233344443333 123433 2345556666666777
Q ss_pred CcchhhHHHHHhhhcCcc
Q 010992 454 TLEAKDILVHLERNWNMT 471 (496)
Q Consensus 454 TLEvKDVQLhLERnWNI~ 471 (496)
.|+..++...|.+ +|..
T Consensus 99 ~I~~~El~~~l~~-~g~~ 115 (148)
T 2lmt_A 99 FISPAELRFVMIN-LGEK 115 (148)
T ss_dssp EECHHHHHHHHHH-HTCC
T ss_pred cCcHHHHHHHHHH-cCcc
Confidence 8888888777765 3443
No 189
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=43.18 E-value=84 Score=23.98 Aligned_cols=72 Identities=6% Similarity=0.039 Sum_probs=39.5
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH----------HHHHHH------------HHHHHHHhhhhcCCC
Q 010992 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIA----------EDFVES------------ITMFGCSLAKHRKSD 453 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIA----------DDFVDs------------Vvt~ACrLAKHRKSd 453 (496)
.+++..|++..|..+++.+.- .++++..+.|.+.+ ++|+.- .+..++++.-..+..
T Consensus 22 ~~~~G~i~~~e~~~~l~~~~~--~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 99 (147)
T 4ds7_A 22 KDNSGSISASELATVMRSLGL--SPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDG 99 (147)
T ss_dssp TTCSSEEEHHHHHHHHHHTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTTCSS
T ss_pred CCCCCCcCHHHHHHHHHHhCC--CCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHhCCCCCC
Confidence 445556677777766666532 23333222222222 344433 334455555555677
Q ss_pred CcchhhHHHHHhhhcCc
Q 010992 454 TLEAKDILVHLERNWNM 470 (496)
Q Consensus 454 TLEvKDVQLhLERnWNI 470 (496)
.|+..++.-.|+. +|.
T Consensus 100 ~i~~~e~~~~l~~-~~~ 115 (147)
T 4ds7_A 100 LISAAELKHVLTS-IGE 115 (147)
T ss_dssp EECHHHHHHHHHH-TTC
T ss_pred eECHHHHHHHHHH-cCC
Confidence 8999999888874 453
No 190
>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*
Probab=43.02 E-value=4.7 Score=32.35 Aligned_cols=27 Identities=19% Similarity=0.541 Sum_probs=22.6
Q ss_pred hhcCCCCcchhhHHHHHhhhcCccccC
Q 010992 448 KHRKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 448 KHRKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
..-|-|.|++-+|...||++||+.|+-
T Consensus 50 ~dLGlDSL~~vel~~~lE~~fgi~i~~ 76 (97)
T 3ejb_A 50 EDLGADSLDTVELVMALEEEFDTEIPD 76 (97)
T ss_dssp TTTCCCTTHHHHHHHHHHHHTTCCCCH
T ss_pred hhcCCCHHHHHHHHHHHHHHHCCCCCH
Confidence 344778888999999999999999964
No 191
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=42.87 E-value=8.7 Score=35.97 Aligned_cols=75 Identities=19% Similarity=0.176 Sum_probs=53.5
Q ss_pred cCCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHH----HHHhhhhcCCCCcchhhHHHHHhhhcCccccCC
Q 010992 401 ILTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMF----GCSLAKHRKSDTLEAKDILVHLERNWNMTLPGF 475 (496)
Q Consensus 401 ILtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvt~----ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGF 475 (496)
-|.-.+...+++.|. .-.++|++-.+...+=+++|+..+-.. ...|++.++...|...|.--||.|.||+.+-|+
T Consensus 119 Wldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~ 198 (284)
T 2prs_A 119 WLSPEIARATAVAIHGKLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFGLTPLGH 198 (284)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTCCEEEEESCCHHHHHHHTCCCCEE
T ss_pred cCCHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEECccHHHHHHHCCCeEeEe
Confidence 456666666666662 334677777777777777777766543 335666677778889999999999999987543
No 192
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=42.82 E-value=57 Score=23.84 Aligned_cols=27 Identities=15% Similarity=0.342 Sum_probs=17.4
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHH
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPD 423 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpD 423 (496)
+.+++..|++..|..+++.+. ..++++
T Consensus 19 D~d~~G~i~~~el~~~l~~~g--~~~~~~ 45 (92)
T 2kn2_A 19 DKDQNGYISASELRHVMINLG--EKLTDE 45 (92)
T ss_dssp CTTCSSEECHHHHHHHHHHTT--CCCCHH
T ss_pred CCCCCCeEcHHHHHHHHHHhC--CCCCHH
Confidence 345566788888888888763 334444
No 193
>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A
Probab=42.49 E-value=4.1 Score=29.69 Aligned_cols=24 Identities=17% Similarity=0.583 Sum_probs=18.6
Q ss_pred cCCCCcchhhHHHHHhhhcCcccc
Q 010992 450 RKSDTLEAKDILVHLERNWNMTLP 473 (496)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IP 473 (496)
-|-+.|.+-++...||+.||+.|+
T Consensus 31 lG~DSl~~~~l~~~le~~~gi~i~ 54 (77)
T 2ehs_A 31 LGADSLDVVELIMAFEEEFGIEIP 54 (77)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCCCC
T ss_pred cCCCHHHHHHHHHHHHHHhCCccC
Confidence 355667777888888898888875
No 194
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=42.47 E-value=7.8 Score=36.66 Aligned_cols=73 Identities=18% Similarity=0.194 Sum_probs=51.3
Q ss_pred CCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHH----HHHhhhhcCCCCcchhhHHHHHhhhcCccccC
Q 010992 402 LTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMF----GCSLAKHRKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 402 LtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvt~----ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
|.-+....+++.|. .-.++|++-.+...+=+++|+..+-.. ...|++.++...|...|.--||.|.||+.+-|
T Consensus 125 ldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~ 202 (286)
T 3gi1_A 125 TDPVLAGEEAVNIAKELGRLDPKHKDSYTKNAKAFKKEAEQLTEEYTQKFKKVRSKTFVTQHTAFSYLAKRFGLKQLG 202 (286)
T ss_dssp GSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEEESCCHHHHHHTTCEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCchHHHHHHCCCeEee
Confidence 55666666666663 234677777777777777777766433 33466666777788899999999999998644
No 195
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=42.21 E-value=36 Score=31.41 Aligned_cols=63 Identities=11% Similarity=0.334 Sum_probs=40.4
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc-chhhHHHHHhhhcCccccCCC
Q 010992 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTL-EAKDILVHLERNWNMTLPGFS 476 (496)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTL-EvKDVQLhLERnWNI~IPGFs 476 (496)
|-+|+-|++|++-|+ ...+.+|.+-+|+|..+|-+..- +...+ .+.|+---|+++ |+.||.+.
T Consensus 84 ias~~fl~~l~~l~~--~~~~~~Vk~kil~li~~W~~~f~----------~~~~l~~i~~~Y~~Lk~~-G~~FP~~~ 147 (226)
T 3zyq_A 84 VANKQTMEELKDLLK--RQVEVNVRNKILYLIQAWAHAFR----------NEPKYKVVQDTYQIMKVE-GHVFPEFK 147 (226)
T ss_dssp HSSHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHTT----------TCGGGHHHHHHHHHHHHH-TCCCCCCC
T ss_pred hccHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHhC----------CCcchHHHHHHHHHHHhc-CCCcccch
Confidence 456777777777664 35688899888888887765321 11111 266776666665 78888753
No 196
>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A
Probab=41.97 E-value=4.7 Score=29.83 Aligned_cols=24 Identities=21% Similarity=0.585 Sum_probs=19.1
Q ss_pred cCCCCcchhhHHHHHhhhcCcccc
Q 010992 450 RKSDTLEAKDILVHLERNWNMTLP 473 (496)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IP 473 (496)
-|-+.|.+-++...||+.||+.|+
T Consensus 33 lG~DSl~~~el~~~le~~fgi~i~ 56 (78)
T 1l0i_A 33 LGADSLDTVELVMALEEEFDTEIP 56 (78)
T ss_dssp SCCCHHHHHHHHHHHHHHHTCCCC
T ss_pred cCCCHHHHHHHHHHHHHHhCCCCC
Confidence 355667777888899999999886
No 197
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=41.79 E-value=64 Score=26.29 Aligned_cols=70 Identities=13% Similarity=0.144 Sum_probs=35.4
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH---------HHHHHH-----------HHHHHHHHhhhhcCCCCcch
Q 010992 398 GNRILTKRSIQELVNQIDPSERLDPDVEDILVDI---------AEDFVE-----------SITMFGCSLAKHRKSDTLEA 457 (496)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI---------ADDFVD-----------sVvt~ACrLAKHRKSdTLEv 457 (496)
++..|++..|.++++.+.....-+.++++++..+ .+||+. ..+..+++..-..+...|+.
T Consensus 39 ~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~ 118 (190)
T 2l2e_A 39 PSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISY 118 (190)
T ss_dssp CCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCH
T ss_pred CCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcH
Confidence 3455666666666666533222222333333222 134442 23444555555556667777
Q ss_pred hhHHHHHhhh
Q 010992 458 KDILVHLERN 467 (496)
Q Consensus 458 KDVQLhLERn 467 (496)
.++.-.|...
T Consensus 119 ~e~~~~~~~~ 128 (190)
T 2l2e_A 119 DEMLRIVDAI 128 (190)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7776666553
No 198
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=41.71 E-value=3.4 Score=30.86 Aligned_cols=25 Identities=20% Similarity=0.465 Sum_probs=20.7
Q ss_pred cCCCCcchhhHHHHHhhhcCccccC
Q 010992 450 RKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
-|-+.|.+-++...||++||+.|+-
T Consensus 37 lG~DSl~~vel~~~le~~fgi~i~~ 61 (81)
T 1f80_D 37 LGADXLDVVELVMELEDEFDMEISD 61 (81)
T ss_dssp SCCCHHHHHHHHHHHHHHTTCCCCH
T ss_pred cCCcHHHHHHHHHHHHHHhCCccCH
Confidence 4667778888999999999999864
No 199
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=41.49 E-value=52 Score=26.39 Aligned_cols=43 Identities=16% Similarity=0.172 Sum_probs=21.0
Q ss_pred HhhhhcCCCCcchhhHHHHHhh----hcCccccCCCcc-cccccCCcc
Q 010992 445 SLAKHRKSDTLEAKDILVHLER----NWNMTLPGFSGD-EIKTFRKPV 487 (496)
Q Consensus 445 rLAKHRKSdTLEvKDVQLhLER----nWNI~IPGFssD-EIr~~rk~~ 487 (496)
+.+-..+...|+..+....+.. .-|..||....+ -+.+.++.+
T Consensus 55 ~~~D~d~dG~I~~~EF~~~~~~~~~~~~G~~lp~~lp~~l~pps~~~~ 102 (111)
T 2kgr_A 55 NLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLPPVLPPEYIPPSFRRV 102 (111)
T ss_dssp HHHCSSCCSEEEHHHHHHHHHHHHHHHTTCCCCSSCCGGGSCTTTTCC
T ss_pred HHHCCCCCCCCcHHHHHHHHHHHHHHHCCCCCccccCcccCCCccCCC
Confidence 3444445556666665333221 235677766544 334444443
No 200
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=41.46 E-value=28 Score=30.37 Aligned_cols=28 Identities=14% Similarity=-0.009 Sum_probs=18.0
Q ss_pred HHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 440 TMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 440 vt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+..+.++.-..+...|+..++.-+|...
T Consensus 135 l~~~F~~~D~d~dG~Is~~El~~~l~~~ 162 (226)
T 2lvv_A 135 LTVMFDTMDKDGSLLLELQEFKEALPKL 162 (226)
T ss_dssp HHHHHHHHSCSSCCEECHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCeEcHHHHHHHHHHH
Confidence 3444455545566778888887777653
No 201
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=41.43 E-value=76 Score=26.26 Aligned_cols=76 Identities=9% Similarity=0.138 Sum_probs=45.8
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH-----HHHHHH------------HHHHHHHHhhhhcCCCCcch
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI-----AEDFVE------------SITMFGCSLAKHRKSDTLEA 457 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI-----ADDFVD------------sVvt~ACrLAKHRKSdTLEv 457 (496)
+.+++..|++..|..+++.++-. ..+.++++++.+. -++|+. +.+..|.++--.-++..|++
T Consensus 26 D~d~dG~I~~~El~~~l~~lg~~-~~~~~~~~~~~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~ 104 (153)
T 3i5g_B 26 DQDRDGFIGMEDLKDMFSSLGRV-PPDDELNAMLKECPGQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPE 104 (153)
T ss_dssp CCSTTSCCCHHHHHHHHHHTTSC-CCHHHHHHHHHTSSSCCCSHHHHHTTTTTTTTCCCHHHHHHHHHTTCSSCSSCCCH
T ss_pred CCCCCCeEcHHHHHHHHHHcCCC-ccHHHHHHHHHhccCCccHHHHHHHHHhhhcccccHHHHHHHHhccccCCCCeEeH
Confidence 45677788999999988887532 2334444444322 123432 34555666665566777888
Q ss_pred hhHHHHHhhhcCccc
Q 010992 458 KDILVHLERNWNMTL 472 (496)
Q Consensus 458 KDVQLhLERnWNI~I 472 (496)
.++.-+|.+ +|..+
T Consensus 105 ~el~~~l~~-~g~~l 118 (153)
T 3i5g_B 105 DYLKDLLEN-MGDNF 118 (153)
T ss_dssp HHHHHHHHS-SSSCC
T ss_pred HHHHHHHHH-cCCcC
Confidence 888777754 55443
No 202
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=41.42 E-value=43 Score=27.23 Aligned_cols=23 Identities=9% Similarity=0.215 Sum_probs=14.2
Q ss_pred hhhhcCCCCcchhhHHHHHhhhc
Q 010992 446 LAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 446 LAKHRKSdTLEvKDVQLhLERnW 468 (496)
.+-..+...|+..+..-.+...|
T Consensus 157 ~~D~d~dg~i~~~eF~~~~~~~~ 179 (195)
T 1qv0_A 157 HCDLDNAGDLDVDEMTRQHLGFW 179 (195)
T ss_dssp HSCCCTTSCEEHHHHHHHHHHHH
T ss_pred HhCCCCCCcCCHHHHHHHHHHHc
Confidence 33334556788888866666654
No 203
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=41.35 E-value=38 Score=29.55 Aligned_cols=31 Identities=23% Similarity=0.259 Sum_probs=22.3
Q ss_pred HHHHHHhhhhcCCCCcchhhHHHHHhhhcCcc
Q 010992 440 TMFGCSLAKHRKSDTLEAKDILVHLERNWNMT 471 (496)
Q Consensus 440 vt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~ 471 (496)
+..+.+..-..++..|+..++.-.|++ +|..
T Consensus 119 l~~~F~~~D~d~~G~I~~~El~~~l~~-~g~~ 149 (220)
T 3sjs_A 119 AYNLFVMNARARSGTLEPHEILPALQQ-LGFY 149 (220)
T ss_dssp HHHHHHHHCCSSTTEECHHHHHHHHHH-HTCC
T ss_pred HHHHHHHHCCCCCCCCcHHHHHHHHHH-hCCC
Confidence 455666666677888999999888875 3443
No 204
>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*
Probab=41.31 E-value=16 Score=27.66 Aligned_cols=33 Identities=18% Similarity=0.317 Sum_probs=25.8
Q ss_pred cCCCCcchhhHHHHHhhhcCccccCCCcccccc
Q 010992 450 RKSDTLEAKDILVHLERNWNMTLPGFSGDEIKT 482 (496)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPGFssDEIr~ 482 (496)
-|-+.|.+-++...||++||+.||-..-.++++
T Consensus 38 lG~DSL~~vel~~~le~~fgi~i~~~~~~~~~T 70 (86)
T 1af8_A 38 IGYDSLALMETAARLESRYGVSIPDDVAGRVDT 70 (86)
T ss_dssp TTCCTTTHHHHHHHHTTTTCSCCCTTTTTTCCS
T ss_pred cCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCC
Confidence 377889999999999999999998544334443
No 205
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=41.15 E-value=71 Score=24.84 Aligned_cols=72 Identities=10% Similarity=0.027 Sum_probs=41.5
Q ss_pred CcC-CccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHHH-----HHHHHHHH------------HHHHHHhhhhcCCCCcc
Q 010992 396 EFG-NRILTKRSIQELVNQIDPSERLDPD-VEDILVDI-----AEDFVESI------------TMFGCSLAKHRKSDTLE 456 (496)
Q Consensus 396 e~~-nrILtKrKLqELVrqIDPsesLDpD-VEELLLeI-----ADDFVDsV------------vt~ACrLAKHRKSdTLE 456 (496)
.++ +..|++..|..+++.++- .++++ +++++..+ -++|+.-+ +..++++.-..+...|+
T Consensus 25 ~d~~~G~i~~~el~~~l~~~g~--~~~~~~~~~l~~~~d~~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~ 102 (146)
T 2qac_A 25 EKSSGGKISIDNASYNARKLGL--APSSIDEKKIKELYGDNLTYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLT 102 (146)
T ss_dssp HHCBTTBEEHHHHHHHHHHTTC--CCCHHHHHHHHHHHCSEECHHHHHHHHHHTCCTTCCHHHHHHHHHTTCTTCSSEEE
T ss_pred ccCCCCcccHHHHHHHHHHhCC--CCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCcchHHHHHHHHHHhCCCCCCCCC
Confidence 345 667888888888888743 34444 44443322 13555433 33444444445566788
Q ss_pred hhhHHHHHhhhcCc
Q 010992 457 AKDILVHLERNWNM 470 (496)
Q Consensus 457 vKDVQLhLERnWNI 470 (496)
..++.-.|.+ +|.
T Consensus 103 ~~el~~~l~~-~g~ 115 (146)
T 2qac_A 103 KSQMKNILTT-WGD 115 (146)
T ss_dssp HHHHHHHHHH-SSS
T ss_pred HHHHHHHHHH-hCC
Confidence 8888777765 343
No 206
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=41.05 E-value=53 Score=27.96 Aligned_cols=88 Identities=6% Similarity=0.122 Sum_probs=48.7
Q ss_pred CCCcCCccCCHHHHHHHHHhhCC--CCCCCHH-HHHH---HHHHH----------HHHHH-------------------H
Q 010992 394 SDEFGNRILTKRSIQELVNQIDP--SERLDPD-VEDI---LVDIA----------EDFVE-------------------S 438 (496)
Q Consensus 394 ~~e~~nrILtKrKLqELVrqIDP--sesLDpD-VEEL---LLeIA----------DDFVD-------------------s 438 (496)
.+.+++..|++..|..+++.+.. +..++++ ++++ |+..+ ++|+. .
T Consensus 112 ~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~ 191 (263)
T 2f33_A 112 YDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGK 191 (263)
T ss_dssp SSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSHHHHHHTCCCHH
T ss_pred HCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHHHHhcCcchHHH
Confidence 34566778888888888877621 2333333 3331 22222 24543 2
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccCCCccccc
Q 010992 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGDEIK 481 (496)
Q Consensus 439 Vvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssDEIr 481 (496)
.+..++++.-..+...|+..++.-+|+..+...=+.++.+|+.
T Consensus 192 ~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~~~e~~ 234 (263)
T 2f33_A 192 EFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNIS 234 (263)
T ss_dssp HHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCCTTTHH
T ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 3445555555567778899998888876433211334455544
No 207
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=41.04 E-value=31 Score=32.09 Aligned_cols=48 Identities=23% Similarity=0.387 Sum_probs=38.5
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 010992 406 SIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSD 453 (496)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSd 453 (496)
.|+.|+..-++..-++.||.+++.+=-++|...|-....+.|+.+..+
T Consensus 128 sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~~~~~ 175 (216)
T 2pwq_A 128 SIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATGPKEE 175 (216)
T ss_dssp HHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC---
T ss_pred HHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCCccc
Confidence 356677766778889999999999888899999999999999876544
No 208
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=41.01 E-value=33 Score=33.87 Aligned_cols=65 Identities=8% Similarity=0.124 Sum_probs=43.1
Q ss_pred CHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhc
Q 010992 403 TKRSIQELVNQID--PSERLDPDVEDILVDIAED---FVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 403 tKrKLqELVrqID--PsesLDpDVEELLLeIADD---FVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (496)
+.+.+.+++++.- .+..+++|+.++|.+.++. -++++++.++.+|...+. .|+..||+-+|++..
T Consensus 264 ~~e~r~~iL~~~~~~~~~~i~~e~l~~la~~~~gn~R~l~~~L~~~~~~a~~~~~-~It~~~~~~~l~~~~ 333 (440)
T 2z4s_A 264 DEETRKSIARKMLEIEHGELPEEVLNFVAENVDDNLRRLRGAIIKLLVYKETTGK-EVDLKEAILLLKDFI 333 (440)
T ss_dssp CHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHCCSCHHHHHHHHHHHHHHHHHSSS-CCCHHHHHHHTSTTT
T ss_pred CHHHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHh
Confidence 3444444444331 2457899998888876642 346677888888876665 488888888877654
No 209
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=40.44 E-value=1.1e+02 Score=23.30 Aligned_cols=70 Identities=7% Similarity=0.045 Sum_probs=40.7
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHH------HHHHHHH-------------HHHHHHHHhhhhcCCCC
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPD-VEDILVD------IAEDFVE-------------SITMFGCSLAKHRKSDT 454 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLe------IADDFVD-------------sVvt~ACrLAKHRKSdT 454 (496)
+.+++..|++..|..+++.++. .++.+ +++++.. =-++|+. ..+..++++.-..+...
T Consensus 15 D~d~~G~i~~~e~~~~l~~~~~--~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~ 92 (145)
T 2bl0_B 15 DKDNDGKVSIEELGSALRSLGK--NPTNAELNTIKGQLNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGT 92 (145)
T ss_dssp CTTCSSCEEGGGHHHHHHHTTC--CCCHHHHHHHHHHHTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHHHHCSSSSSE
T ss_pred CCCCcCccCHHHHHHHHHHhCC--CCCHHHHHHHHHhcCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHHHhCCCCCCe
Confidence 4456667888888888887743 33333 3333322 0224543 23444555554556667
Q ss_pred cchhhHHHHHhh
Q 010992 455 LEAKDILVHLER 466 (496)
Q Consensus 455 LEvKDVQLhLER 466 (496)
|+.+++.-.|++
T Consensus 93 i~~~e~~~~l~~ 104 (145)
T 2bl0_B 93 IQEAELRQLLLN 104 (145)
T ss_dssp EEHHHHHHHHHH
T ss_pred EcHHHHHHHHHH
Confidence 888888877765
No 210
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=40.32 E-value=76 Score=29.93 Aligned_cols=75 Identities=17% Similarity=0.148 Sum_probs=48.6
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHH-HHHHH---------HHHHHHHH-----HHHHHHhhhhcCCCCcchhh
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVED-ILVDI---------AEDFVESI-----TMFGCSLAKHRKSDTLEAKD 459 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEE-LLLeI---------ADDFVDsV-----vt~ACrLAKHRKSdTLEvKD 459 (496)
+.+++..|++..|..++ ++. ..-+.++++ ++..+ .++|+.-+ +..++++.-.-+...|+..+
T Consensus 198 D~d~dG~Is~~El~~~l--~g~-~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~l~~~F~~~D~d~dG~Is~~E 274 (323)
T 1ij5_A 198 DTNSNGTLSRKEFREHF--VRL-GFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEE 274 (323)
T ss_dssp CTTCCSEECHHHHHHHH--HHT-TCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEHHH
T ss_pred CCCCCCcCcHHHHHHHH--cCC-CCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 45677788988888887 321 122455666 55544 45777665 44555555556777899999
Q ss_pred HHHHHhhhcCccc
Q 010992 460 ILVHLERNWNMTL 472 (496)
Q Consensus 460 VQLhLERnWNI~I 472 (496)
+.-+|.+.+|..+
T Consensus 275 l~~~l~~~~g~~l 287 (323)
T 1ij5_A 275 VQKVLEDAHIPES 287 (323)
T ss_dssp HHHHHHHTTCCGG
T ss_pred HHHHHHHHcCCCC
Confidence 9888855666544
No 211
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=39.90 E-value=37 Score=30.13 Aligned_cols=58 Identities=14% Similarity=0.122 Sum_probs=36.8
Q ss_pred CCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHH
Q 010992 402 LTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDIL 461 (496)
Q Consensus 402 LtKrKLqELVrqID--PsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQ 461 (496)
++...+.++++++- .+..+++++.+.|.++++.-+..++....+++... ..++.+||.
T Consensus 169 l~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~r~~~~~l~~~~~~~--~~i~~~~v~ 228 (327)
T 1iqp_A 169 LRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALD--KKITDENVF 228 (327)
T ss_dssp CCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--SEECHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHhcC--CCCCHHHHH
Confidence 56777888777663 34468999999999888765555555444444322 235555553
No 212
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=39.87 E-value=25 Score=35.82 Aligned_cols=42 Identities=12% Similarity=0.283 Sum_probs=33.5
Q ss_pred HHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 426 DILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 426 ELLLeIADDF----VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+.|.++++.| |..||..|+.+|-.++.+.|+.+|+.-.|+|-
T Consensus 377 ~~lA~~t~G~sGADi~~l~~eA~~~air~~~~~i~~~d~~~Al~~v 422 (437)
T 4b4t_L 377 EAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKV 422 (437)
T ss_dssp HHHHHTCCSCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 4455554433 78899999999999999999999999999874
No 213
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=39.77 E-value=8.6 Score=36.09 Aligned_cols=75 Identities=12% Similarity=0.183 Sum_probs=52.6
Q ss_pred cCCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHH----HHhhhhcCCCCcchhhHHHHHhhhcCccccCC
Q 010992 401 ILTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFG----CSLAKHRKSDTLEAKDILVHLERNWNMTLPGF 475 (496)
Q Consensus 401 ILtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvt~A----CrLAKHRKSdTLEvKDVQLhLERnWNI~IPGF 475 (496)
-|.-.+...+++.|. .-.++|++-.+...+=++.|+..+-... ..|++.++...|...|.--||.|.||+.+=|+
T Consensus 122 Wldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~ 201 (284)
T 3cx3_A 122 WLDPEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIKKAQELTKKFQPKFEKATQKTFVTQHTAFSYLAKRFGLNQLGI 201 (284)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCEEEEESCCHHHHHHTTCCEEEE
T ss_pred ccCHHHHHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCchHHHHHHcCCEEeec
Confidence 345666666666663 3345777777777777777777665432 34666667778889999999999999987544
No 214
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=39.52 E-value=11 Score=32.17 Aligned_cols=44 Identities=16% Similarity=0.208 Sum_probs=32.6
Q ss_pred HHHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 010992 406 SIQELVNQIDP--------SERLDPDVEDILVDIAEDFVESITMFGCSLAKH 449 (496)
Q Consensus 406 KLqELVrqIDP--------sesLDpDVEELLLeIADDFVDsVvt~ACrLAKH 449 (496)
.|..|+.+++. ..+=|++|.++|.+|||+=.+-|..+---|-+.
T Consensus 23 ai~aL~~EleAI~~Y~q~A~~t~D~evk~vl~~iadEEkeH~g~~l~~Lrr~ 74 (95)
T 1zpy_A 23 AIISLREELEAVDLYNQRVNACKDKELKAILAHNRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455555543 457899999999999999888887776666655
No 215
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=39.51 E-value=92 Score=22.72 Aligned_cols=17 Identities=24% Similarity=0.600 Sum_probs=10.6
Q ss_pred cCCc-cCCHHHHHHHHHh
Q 010992 397 FGNR-ILTKRSIQELVNQ 413 (496)
Q Consensus 397 ~~nr-ILtKrKLqELVrq 413 (496)
+++. .|++..|..+++.
T Consensus 22 d~~G~~I~~~el~~~l~~ 39 (93)
T 1k2h_A 22 EGDKYKLSKKELKDLLQT 39 (93)
T ss_dssp SSCCSSCCHHHHHHHHHH
T ss_pred CCCcCccCHHHHHHHHHH
Confidence 3444 6777777777665
No 216
>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}
Probab=39.48 E-value=11 Score=28.51 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=20.1
Q ss_pred CCCCcchhhHHHHHhhhcCccccC
Q 010992 451 KSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 451 KSdTLEvKDVQLhLERnWNI~IPG 474 (496)
|-+.|.+-++...||+.||+.|+-
T Consensus 41 G~DSL~~~~l~~~l~~~~g~~l~~ 64 (89)
T 2kr5_A 41 GIDSLSSMVIGSRFREDLGLDLGP 64 (89)
T ss_dssp TCCHHHHHHHHHHHHHTTCCCCCS
T ss_pred CccHHHHHHHHHHHHHHHCCCCCc
Confidence 567777888889999999999875
No 217
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=39.31 E-value=19 Score=25.17 Aligned_cols=15 Identities=7% Similarity=0.333 Sum_probs=7.8
Q ss_pred ccCCHHHHHHHHHhh
Q 010992 400 RILTKRSIQELVNQI 414 (496)
Q Consensus 400 rILtKrKLqELVrqI 414 (496)
..|++..|..+++.+
T Consensus 22 G~i~~~el~~~l~~~ 36 (76)
T 1qx2_A 22 NQISKEELKLVMQTL 36 (76)
T ss_dssp TSEEHHHHHHHHHHH
T ss_pred CeECHHHHHHHHHHh
Confidence 445555555555544
No 218
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=39.17 E-value=23 Score=28.24 Aligned_cols=21 Identities=10% Similarity=0.181 Sum_probs=14.5
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 010992 395 DEFGNRILTKRSIQELVNQID 415 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (496)
+.+++..|++..|..+++.+.
T Consensus 16 D~d~~G~i~~~El~~~l~~~~ 36 (174)
T 1q80_A 16 DFDKDGAITRMDFESMAERFA 36 (174)
T ss_dssp CTTCSSEESHHHHHHHHHHHH
T ss_pred CCCCCCcEeHHHHHHHHHHHH
Confidence 445666777777777777764
No 219
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=39.16 E-value=44 Score=25.72 Aligned_cols=61 Identities=8% Similarity=0.016 Sum_probs=30.1
Q ss_pred HHHHHHHHhhCCC--CCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 405 RSIQELVNQIDPS--ERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 405 rKLqELVrqIDPs--esLDpD-VEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
..|.++.+.+|.+ ..|+.+ ...+|..+...+-+..+...++.+-. +...|+..+..-.|.+
T Consensus 76 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 76 EEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence 4555666665543 245443 44444443322223333333344444 6667888877655543
No 220
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=39.09 E-value=20 Score=33.51 Aligned_cols=10 Identities=10% Similarity=0.272 Sum_probs=4.2
Q ss_pred HhhhcCcccc
Q 010992 464 LERNWNMTLP 473 (496)
Q Consensus 464 LERnWNI~IP 473 (496)
+-|.+|+..|
T Consensus 290 ~a~~~gv~tP 299 (318)
T 3hwr_A 290 RGDALGIPVP 299 (318)
T ss_dssp HHHHTTCCCH
T ss_pred HHHHhCCCCc
Confidence 3344444443
No 221
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=38.99 E-value=79 Score=24.08 Aligned_cols=20 Identities=10% Similarity=0.079 Sum_probs=11.5
Q ss_pred CCcCCccCCHHHHHHHHHhh
Q 010992 395 DEFGNRILTKRSIQELVNQI 414 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI 414 (496)
+.+++..|++..|.++++.+
T Consensus 19 D~d~dG~I~~~el~~~l~~~ 38 (92)
T 1fi6_A 19 QPDLNGFIPGSAAKEFFTKS 38 (92)
T ss_dssp CCSTTCEEEHHHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHc
Confidence 34445556666666666655
No 222
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=38.90 E-value=40 Score=32.87 Aligned_cols=72 Identities=18% Similarity=0.296 Sum_probs=40.4
Q ss_pred CCcCCccCCHHHHHHHHHhhCC------C-CCCCHHHHHHHHHH---------HHHHHH-----------HHHHHHHHhh
Q 010992 395 DEFGNRILTKRSIQELVNQIDP------S-ERLDPDVEDILVDI---------AEDFVE-----------SITMFGCSLA 447 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDP------s-esLDpDVEELLLeI---------ADDFVD-----------sVvt~ACrLA 447 (496)
|.+++..|++..|..+++.+.. + ...+.++++++..+ .+||+. +.+..+.++.
T Consensus 365 D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~ 444 (504)
T 3q5i_A 365 DKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLF 444 (504)
T ss_dssp CTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHH
T ss_pred CCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcccCHHHHHHHHHHh
Confidence 4456666777776666665521 1 12233444444332 244543 3445566666
Q ss_pred hhcCCCCcchhhHHHHHhh
Q 010992 448 KHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 448 KHRKSdTLEvKDVQLhLER 466 (496)
-..+...|+.+++.-.|..
T Consensus 445 D~d~dG~Is~~El~~~l~~ 463 (504)
T 3q5i_A 445 DTDKSGKITKEELANLFGL 463 (504)
T ss_dssp CTTCCSEECHHHHHHHTTC
T ss_pred cCCCCCcCcHHHHHHHHhh
Confidence 6667778888888777665
No 223
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=38.85 E-value=38 Score=29.98 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=25.1
Q ss_pred CCCHHHHHHHHHHH--H--HHHHHHHHHHHHhhhhcCCCCcchhhH
Q 010992 419 RLDPDVEDILVDIA--E--DFVESITMFGCSLAKHRKSDTLEAKDI 460 (496)
Q Consensus 419 sLDpDVEELLLeIA--D--DFVDsVvt~ACrLAKHRKSdTLEvKDV 460 (496)
.|++++.++|.... . .-+.+|++.+|.+|+ .+.|+.+||
T Consensus 208 ~~~~~a~~~L~~~~~~gn~reL~~~l~~~~~~~~---~~~i~~~~l 250 (265)
T 2bjv_A 208 GFTERARETLLNYRWPGNIRELKNVVERSVYRHG---TSDYPLDDI 250 (265)
T ss_dssp CBCHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHC---CSSSCBCCC
T ss_pred CcCHHHHHHHHhCCCCCCHHHHHHHHHHHHHhCC---CCcCcHHHc
Confidence 67888888776543 1 235677777777765 335667776
No 224
>3nnr_A Transcriptional regulator, TETR family; TETR-family transcriptional regulator, structural genomics, center for structural genomics, JCSG; HET: MSE; 2.49A {Marinobacter aquaeolei}
Probab=38.80 E-value=5.2 Score=33.73 Aligned_cols=35 Identities=6% Similarity=0.121 Sum_probs=19.1
Q ss_pred cCCCCcchhhHHHHHhhhcCccccCCCcccccccC
Q 010992 450 RKSDTLEAKDILVHLERNWNMTLPGFSGDEIKTFR 484 (496)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPGFssDEIr~~r 484 (496)
++...++.+++.-+++.-|++-.|++..+..+.|.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 207 (228)
T 3nnr_A 173 EEPASLSLTELKQGIYQVLTLEVPYLTPEYRERVL 207 (228)
T ss_dssp -------CCSGGGHHHHHHHHHGGGBCHHHHHHHH
T ss_pred CCcccccHHHHHHHHHHHHHHhCCcCCHHHHHHHH
Confidence 44445566677777777777777777766555443
No 225
>3hvm_A Agmatine deiminase; hydrolase; 2.10A {Helicobacter pylori} SCOP: d.126.1.6 PDB: 2cmu_A
Probab=38.76 E-value=8.2 Score=38.47 Aligned_cols=40 Identities=28% Similarity=0.504 Sum_probs=34.6
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhhcC----cccc-C-CCccc
Q 010992 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWN----MTLP-G-FSGDE 479 (496)
Q Consensus 439 Vvt~ACrLAKHRKSdTLEvKDVQLhLERnWN----I~IP-G-FssDE 479 (496)
+++..|.|-++|+-. |.-.+|+-.|++.+| |||| | +..||
T Consensus 153 ltTe~clLn~nRNP~-lsk~eiE~~L~~~LGv~kviWL~~G~l~~Dd 198 (330)
T 3hvm_A 153 LTNTQCLLEKNRNPH-LNQNGIETMLKKELGAKQVLWYSYGYLKGDD 198 (330)
T ss_dssp EEEHHHHTCTTTSTT-SCHHHHHHHHHHHHCCSEEEEECCCCCTTCC
T ss_pred EEEeehhcCCCCCCC-CCHHHHHHHHHHHhCCCEEEEECCCCcCCCC
Confidence 567889999999987 789999999999998 7889 7 66676
No 226
>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A
Probab=38.76 E-value=4.8 Score=32.37 Aligned_cols=25 Identities=24% Similarity=0.426 Sum_probs=21.3
Q ss_pred cCCCCcchhhHHHHHhhhcCccccC
Q 010992 450 RKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
-+-|.|++-+|.+.||++||+.|+.
T Consensus 33 LGlDSL~~veLi~~lE~~fgi~i~~ 57 (101)
T 2kw2_A 33 LGIDSLDFLDIAFAIDKAFGIKLPL 57 (101)
T ss_dssp CCCCHHHHHHHHHHHHHHTTCCCCH
T ss_pred cCCCHHHHHHHHHHHHHHHCCccCH
Confidence 3667788889999999999999974
No 227
>1msk_A Cobalamin-dependent methionine synthase; methyltransferase, transferase, methionine biosynthesis, vitamin B12; HET: SAM; 1.80A {Escherichia coli K12} SCOP: d.173.1.1
Probab=38.74 E-value=61 Score=32.41 Aligned_cols=68 Identities=12% Similarity=0.215 Sum_probs=41.4
Q ss_pred HHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----CCCCcchhhHHHHHhhhcCccc-cCCCcc
Q 010992 407 IQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHR-----KSDTLEAKDILVHLERNWNMTL-PGFSGD 478 (496)
Q Consensus 407 LqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHR-----KSdTLEvKDVQLhLERnWNI~I-PGFssD 478 (496)
+.+++++. ....|+--.=+|--|||.++|.+++..+..-+.. ..+.++.+|+ +-|+.-|++. |||++-
T Consensus 173 i~~~~~~~--~~~~ddy~aiml~alAdrlAEA~AE~~h~~VR~e~wGya~~e~l~~~~l--~~~~Y~GiR~sPGYpac 246 (331)
T 1msk_A 173 EDALADAF--EAQHDDYNKIMVKALADRLAEAFAEYLHERVRKVYWGYAPNENLSNEEL--IRENYQGIRPAPGYPAC 246 (331)
T ss_dssp HHHHHHHH--HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCTTCCCCHHHH--HTTCSSCBCCCTTSTTS
T ss_pred HHHHHHHH--HhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccCHHHH--HhhccCccCCCCCCCCC
Confidence 66666665 1122333333345678888888888777766553 2345777775 3455457877 899853
No 228
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=38.72 E-value=5 Score=29.76 Aligned_cols=26 Identities=19% Similarity=0.413 Sum_probs=20.7
Q ss_pred cCCCCcchhhHHHHHhhhcCccccCC
Q 010992 450 RKSDTLEAKDILVHLERNWNMTLPGF 475 (496)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPGF 475 (496)
-|-+.|.+-++...||++||+.|+-.
T Consensus 37 lG~DSl~~~~l~~~le~~fgi~i~~~ 62 (82)
T 2cnr_A 37 LDVDSLSMVEVVVAAEERFDVKIPDD 62 (82)
T ss_dssp SCCCHHHHHHHHHHHHGGGTBCCCGG
T ss_pred cCCChHHHHHHHHHHHHHhCCCCCHH
Confidence 35566777788999999999999743
No 229
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Probab=38.60 E-value=14 Score=27.38 Aligned_cols=24 Identities=21% Similarity=0.113 Sum_probs=20.5
Q ss_pred cCCCCcchhhHHHHHhhhcCcccc
Q 010992 450 RKSDTLEAKDILVHLERNWNMTLP 473 (496)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IP 473 (496)
-|-+.|.+-++...||+.||+.|+
T Consensus 43 lG~DSl~~~~l~~~l~~~~~~~i~ 66 (88)
T 2afd_A 43 YDLNSSKALILLGRLEKWLGKELN 66 (88)
T ss_dssp TTCCSTHHHHHHHHHHHHTTSCCC
T ss_pred cCccHHHHHHHHHHHHHHHCCCcC
Confidence 366778888999999999999886
No 230
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=38.56 E-value=1.1e+02 Score=26.48 Aligned_cols=32 Identities=6% Similarity=0.122 Sum_probs=22.9
Q ss_pred HHHHHHHHHhhhhcCCCCcchhhHHHHHhhhc
Q 010992 437 ESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 437 DsVvt~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (496)
++.+..+.++.-..+...|+..++.-.|.+.|
T Consensus 124 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~ 155 (224)
T 1s1e_A 124 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIY 155 (224)
T ss_dssp HHHHHHHHHHHCTTCCSEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHHHHHH
Confidence 34455666666667777899999888887754
No 231
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=38.55 E-value=70 Score=23.43 Aligned_cols=20 Identities=25% Similarity=0.390 Sum_probs=12.4
Q ss_pred hcCCCCcchhhHHHHHhhhc
Q 010992 449 HRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 449 HRKSdTLEvKDVQLhLERnW 468 (496)
..+...|+..+..-.+.+.+
T Consensus 67 ~~~dg~i~~~eF~~~~~~~~ 86 (90)
T 1avs_A 67 EDGSGTIDFEEFLVMMVRQM 86 (90)
T ss_dssp TTCCSSEEHHHHHHHHHHHH
T ss_pred CCCCCeEeHHHHHHHHHHHh
Confidence 34555677777766666543
No 232
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=38.48 E-value=72 Score=24.48 Aligned_cols=70 Identities=14% Similarity=0.191 Sum_probs=39.3
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH----------HHHHHHH------------HHHHHHhhhhcCC
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIA----------EDFVESI------------TMFGCSLAKHRKS 452 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIA----------DDFVDsV------------vt~ACrLAKHRKS 452 (496)
+.+++..|++..|..+++.+.. .++++..+.|.+.+ ++|+.-+ +..+.++.-..+.
T Consensus 16 D~d~~G~i~~~el~~~l~~~~~--~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~ 93 (142)
T 2bl0_C 16 DSERTGFITKEGLQTVLKQFGV--RVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGT 93 (142)
T ss_dssp CTTCSSEEEHHHHHHHHHHHTC--CCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCSSC
T ss_pred CCCCCCcCcHHHHHHHHHHhCC--CCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCC
Confidence 3455566777777777776632 33443333333333 3454433 3344455545566
Q ss_pred CCcchhhHHHHHhh
Q 010992 453 DTLEAKDILVHLER 466 (496)
Q Consensus 453 dTLEvKDVQLhLER 466 (496)
..|+..++.-.|+.
T Consensus 94 G~i~~~el~~~l~~ 107 (142)
T 2bl0_C 94 GYIPKAALQDALLN 107 (142)
T ss_dssp SCEEHHHHHHHHHH
T ss_pred CcCcHHHHHHHHHH
Confidence 67888888877764
No 233
>3h7c_X Agmatine deiminase; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; HET: MSE 211 1PE; 1.50A {Arabidopsis thaliana} SCOP: d.126.1.6 PDB: 1vkp_A* 2q3u_A* 3h7k_A*
Probab=38.31 E-value=8.3 Score=39.18 Aligned_cols=40 Identities=30% Similarity=0.535 Sum_probs=34.9
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhhcC----cccc-CCCccc
Q 010992 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWN----MTLP-GFSGDE 479 (496)
Q Consensus 439 Vvt~ACrLAKHRKSdTLEvKDVQLhLERnWN----I~IP-GFssDE 479 (496)
+++..|.|-++|+-. |.-.+|+-.|++.+| |||| |+..||
T Consensus 175 ltTe~cLLn~nRNP~-lsk~eIE~~L~~~LGv~kvIWL~~Gl~gDd 219 (383)
T 3h7c_X 175 LVTEECLLNKNRNPH-MSKEQIEEELKKYLGVQSFIWLPRGLYGDE 219 (383)
T ss_dssp EEEHHHHTCTTTCTT-SCHHHHHHHHHHHHCCCEEEEESCCCTTCG
T ss_pred EEEhhhccCCCCCCC-CCHHHHHHHHHHHhCCcEEEEeCCCcCCCC
Confidence 567899999999987 789999999999999 6889 887774
No 234
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=38.10 E-value=57 Score=25.24 Aligned_cols=70 Identities=16% Similarity=0.180 Sum_probs=37.5
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCH-HHHHHHHHH----------HHHHHHHH-----------------HHHHHHh
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDP-DVEDILVDI----------AEDFVESI-----------------TMFGCSL 446 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDp-DVEELLLeI----------ADDFVDsV-----------------vt~ACrL 446 (496)
+.+++..|++..|.++++.++. .+++ ++++++..+ .++|+.-+ +..+.++
T Consensus 14 D~d~~G~i~~~el~~~l~~~g~--~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~~ 91 (148)
T 1m45_A 14 DKKGQGAIAKDSLGDYLRAIGY--NPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQV 91 (148)
T ss_dssp CTTCCSEEEGGGHHHHHHHTTC--CCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHHHhCC--CCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHHH
Confidence 3455666777777777777632 2333 333333333 13454433 3333444
Q ss_pred hhhcCCCCcchhhHHHHHhh
Q 010992 447 AKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 447 AKHRKSdTLEvKDVQLhLER 466 (496)
.-..+...|+..++.-.|.+
T Consensus 92 ~D~d~~G~I~~~el~~~l~~ 111 (148)
T 1m45_A 92 FDKESTGKVSVGDLRYMLTG 111 (148)
T ss_dssp TCSSSSSEEEHHHHHHHHHH
T ss_pred hCCCCCCcCCHHHHHHHHHH
Confidence 44445567888888777765
No 235
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=38.01 E-value=80 Score=24.75 Aligned_cols=70 Identities=10% Similarity=0.125 Sum_probs=40.7
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHHH-----HHHHHHH------------HHHHHHHhhhhcCCCCcc
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPD-VEDILVDI-----AEDFVES------------ITMFGCSLAKHRKSDTLE 456 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLeI-----ADDFVDs------------Vvt~ACrLAKHRKSdTLE 456 (496)
+.+++..|++..|..+++.++. .++.+ +++++..+ -++|+.- .+..++++.-..+...|+
T Consensus 26 D~d~~G~i~~~el~~~l~~~g~--~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~ 103 (153)
T 2ovk_B 26 DQDRDGFIGMEDLKDMFSSLGR--VPPDDELNAMLKECPGQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIP 103 (153)
T ss_dssp CCSTTTCCCHHHHHHHTTTTTS--CCCHHHHHHHHHHSSSCCCSHHHHHTTTTTTTTCCCTTHHHHHHHTTCSSCSSCCC
T ss_pred CCCCCCeECHHHHHHHHHHhCC--CCCHHHHHHHHHHcCCCCCHHHHHHHHHHHhccCChHHHHHHHHHHHCCCCCCeEc
Confidence 4556677888888888877643 33433 44433332 1345432 234444544445666788
Q ss_pred hhhHHHHHhh
Q 010992 457 AKDILVHLER 466 (496)
Q Consensus 457 vKDVQLhLER 466 (496)
..++.-.|.+
T Consensus 104 ~~el~~~l~~ 113 (153)
T 2ovk_B 104 EDYLKDLLEN 113 (153)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888777765
No 236
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=37.95 E-value=1.2e+02 Score=24.47 Aligned_cols=45 Identities=13% Similarity=0.305 Sum_probs=28.6
Q ss_pred cCC-ccCCHHHHHHHHHh-hCC--CCCCCHH-HHHHHHHH---------HHHHHHHHHH
Q 010992 397 FGN-RILTKRSIQELVNQ-IDP--SERLDPD-VEDILVDI---------AEDFVESITM 441 (496)
Q Consensus 397 ~~n-rILtKrKLqELVrq-IDP--sesLDpD-VEELLLeI---------ADDFVDsVvt 441 (496)
+++ ..|++..|..+++. +.. +..++++ |+++|.++ -+|||.-|..
T Consensus 23 dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 23 CGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp SSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred CCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 343 78999999999985 532 3566665 55555444 2368765443
No 237
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=37.68 E-value=64 Score=25.40 Aligned_cols=20 Identities=0% Similarity=-0.052 Sum_probs=12.9
Q ss_pred CCcCCccCCHHHHHHHHHhh
Q 010992 395 DEFGNRILTKRSIQELVNQI 414 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI 414 (496)
+.++...|++..|.++++++
T Consensus 21 D~d~dG~Is~~el~~~l~~~ 40 (99)
T 1qjt_A 21 EAGNTGRVLALDAAAFLKKS 40 (99)
T ss_dssp CCTTSSCCCSHHHHHHHHTS
T ss_pred CCCCCCcCCHHHHHHHHHHc
Confidence 34555667777777777764
No 238
>2qup_A BH1478 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Bacillus halodurans}
Probab=37.34 E-value=25 Score=31.08 Aligned_cols=51 Identities=20% Similarity=0.298 Sum_probs=35.5
Q ss_pred CHHHHHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 010992 403 TKRSIQELVNQIDPS-----ERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSD 453 (496)
Q Consensus 403 tKrKLqELVrqIDPs-----esLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSd 453 (496)
.+..|.+|+.+||.. ...+-+--..-.++.-+|++.|+..+.++-+.++-+
T Consensus 39 ~~e~L~~ll~~I~~~G~rL~~~~t~~~l~~YK~lVk~Fl~~~v~~~~~l~~~~~~~ 94 (145)
T 2qup_A 39 AYERLQALMSKIDDQGKLLSETRTIEELRKYKELVKEFVGDAVELGLRLEERRGFN 94 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHTC---C
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHheehhhcccC
Confidence 357799999999642 233333344456899999999999999998887754
No 239
>1pb6_A Hypothetical transcriptional regulator YCDC; helix-loop-helix, dimer, structural genomics, PSI, protein structure initiative; 2.50A {Escherichia coli} PDB: 3loc_A*
Probab=37.19 E-value=37 Score=27.65 Aligned_cols=31 Identities=6% Similarity=0.014 Sum_probs=18.5
Q ss_pred hhhhcCCCCcchhhHHHHHhhhcCccccCCC
Q 010992 446 LAKHRKSDTLEAKDILVHLERNWNMTLPGFS 476 (496)
Q Consensus 446 LAKHRKSdTLEvKDVQLhLERnWNI~IPGFs 476 (496)
+....+.+..+..|+.-+++.-+++.+-|++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~ 210 (212)
T 1pb6_A 180 VEAVTGATLRDEVFFNQTVENVQRIIIEGIR 210 (212)
T ss_dssp HHHHHSCCTTSHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHhCcCcchHHHHHHHHHHHHHHHHhccc
Confidence 3444444555666666667766666666654
No 240
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=37.09 E-value=33 Score=34.88 Aligned_cols=56 Identities=9% Similarity=0.204 Sum_probs=38.7
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 409 ELVNQIDPSERLDPDVEDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 409 ELVrqIDPsesLDpDVEELLLeIADDF----VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
-+++.+.-...+| .+.|.+.++.| |..||..|+.+|-.++...|+.+|+.-.|++-
T Consensus 363 ~~~~~~~~~~dvd---l~~lA~~t~G~sGADi~~l~~eA~~~a~r~~~~~i~~~Df~~Al~~v 422 (434)
T 4b4t_M 363 IHSRKMTTDDDIN---WQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEV 422 (434)
T ss_dssp HHHHHSCBCSCCC---HHHHHHHCSSCCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHSC
T ss_pred HHhcCCCCCCcCC---HHHHHHhCCCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHH
Confidence 4445543333333 24445554433 78899999999998999999999999988874
No 241
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=36.98 E-value=12 Score=34.49 Aligned_cols=80 Identities=13% Similarity=0.167 Sum_probs=43.8
Q ss_pred CHHHHHHHHHhhCCCCCCCHHH-HHHHHHHHHH----HHHHHHHHHHHhhhhcCC-------------------------
Q 010992 403 TKRSIQELVNQIDPSERLDPDV-EDILVDIAED----FVESITMFGCSLAKHRKS------------------------- 452 (496)
Q Consensus 403 tKrKLqELVrqIDPsesLDpDV-EELLLeIADD----FVDsVvt~ACrLAKHRKS------------------------- 452 (496)
+++...++++.+-....++.++ .+.|.++++. =|++++..||.+|..|..
T Consensus 187 ~~~~r~~il~~~l~~~~~~~~~~~~~la~~~~g~sg~dl~~l~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (301)
T 3cf0_A 187 DEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPV 266 (301)
T ss_dssp CHHHHHHHHHHHHTTSCBCSSCCHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHC--------------------C
T ss_pred CHHHHHHHHHHHHccCCCCccchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccccccccccccccC
Confidence 4555555555543333332221 2334444433 367788888888765531
Q ss_pred CCcchhhHHHHHhhhcCccccCCCcccccccCCc
Q 010992 453 DTLEAKDILVHLERNWNMTLPGFSGDEIKTFRKP 486 (496)
Q Consensus 453 dTLEvKDVQLhLERnWNI~IPGFssDEIr~~rk~ 486 (496)
..|+.+|+.-+|++. -|..+.++++.|.++
T Consensus 267 ~~v~~~~~~~al~~~----~~s~~~~~~~~~~~~ 296 (301)
T 3cf0_A 267 PEIRRDHFEEAMRFA----RRSVSDNDIRKYEMF 296 (301)
T ss_dssp CCBCHHHHHHHHTTC----CCSSCHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHc----CCCCCHHHHHHHHHH
Confidence 246677777777753 245566677766544
No 242
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=36.82 E-value=86 Score=25.14 Aligned_cols=21 Identities=10% Similarity=0.178 Sum_probs=12.9
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 010992 395 DEFGNRILTKRSIQELVNQID 415 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (496)
+.++...|++..|..+++.+.
T Consensus 50 D~d~~G~I~~~el~~~l~~~g 70 (135)
T 3h4s_E 50 ADPERHLITAESLRRNSGILG 70 (135)
T ss_dssp SBTTTTBBCHHHHHHHGGGGT
T ss_pred CCCCCCcCCHHHHHHHHHHhC
Confidence 345556667777776666653
No 243
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=36.37 E-value=67 Score=24.69 Aligned_cols=16 Identities=19% Similarity=0.347 Sum_probs=8.5
Q ss_pred HhhhhcCCCCcchhhH
Q 010992 445 SLAKHRKSDTLEAKDI 460 (496)
Q Consensus 445 rLAKHRKSdTLEvKDV 460 (496)
+.+-..+...|+..+.
T Consensus 51 ~~~D~d~dG~i~~~EF 66 (95)
T 1c07_A 51 SLCDTKDCGKLSKDQF 66 (95)
T ss_dssp HHHCTTCSSSEETTTH
T ss_pred HHHCCCCCCcCCHHHH
Confidence 3444445555666555
No 244
>1jr3_D DNA polymerase III, delta subunit; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1jqj_C* 1xxh_A* 1xxi_A* 3glf_A* 3glg_A* 3glh_A* 3gli_A*
Probab=36.28 E-value=22 Score=32.91 Aligned_cols=63 Identities=11% Similarity=-0.001 Sum_probs=39.0
Q ss_pred CCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHH---HHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 402 LTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFV---ESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 402 LtKrKLqELVrqID--PsesLDpDVEELLLeIADDFV---DsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+..+.|.+.|+++- -+..+|+++.++|.++++.=+ .+.++..|.++ +.+.|+.+||.-++.+.
T Consensus 142 l~~~~l~~~l~~~~~~~g~~i~~~a~~~l~~~~~gdl~~~~~elekl~l~~---~~~~It~e~V~~~~~~~ 209 (343)
T 1jr3_D 142 PEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLALAQALERLSLLW---PDGKLTLPRVEQAVNDA 209 (343)
T ss_dssp CCTTHHHHHHHHHHHHTTCEECHHHHHHHHHSSTTCHHHHHHHHHHHHHHC---TTCEECHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhchHHHHHHHHHHHHHHhc---CCCCCCHHHHHHHHhhh
Confidence 35566766666652 355799999999999876322 23333333333 34468888886665544
No 245
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=36.26 E-value=68 Score=26.99 Aligned_cols=70 Identities=11% Similarity=0.175 Sum_probs=39.6
Q ss_pred CCCcCCccCCHHHHHHHHHhhCCCCCCCH-HHHHHHHHH---------HHHHHHHH-----------HHHHHHhhhhcCC
Q 010992 394 SDEFGNRILTKRSIQELVNQIDPSERLDP-DVEDILVDI---------AEDFVESI-----------TMFGCSLAKHRKS 452 (496)
Q Consensus 394 ~~e~~nrILtKrKLqELVrqIDPsesLDp-DVEELLLeI---------ADDFVDsV-----------vt~ACrLAKHRKS 452 (496)
.+.+++..|++..|..+++.+.. .+.+ ++++++..+ .+||+.-+ +..+.++.-..+.
T Consensus 19 ~D~d~dG~I~~~E~~~~l~~~g~--~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~d 96 (188)
T 1s6i_A 19 IDTDNSGTITFDELKDGLKRVGS--ELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGS 96 (188)
T ss_dssp TSSSSSSCEEHHHHHHHHTTTTC--CCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHHTTTTCS
T ss_pred HCCCCCCcCCHHHHHHHHHHcCC--CCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHHHHCCCCC
Confidence 34567778888888888887742 3443 344443332 24676543 3344444444455
Q ss_pred CCcchhhHHHHHh
Q 010992 453 DTLEAKDILVHLE 465 (496)
Q Consensus 453 dTLEvKDVQLhLE 465 (496)
..|+..++.-.|.
T Consensus 97 G~Is~~El~~~l~ 109 (188)
T 1s6i_A 97 GYITLDEIQQACK 109 (188)
T ss_dssp SEEEHHHHHHTTT
T ss_pred CcCcHHHHHHHHH
Confidence 5677777765554
No 246
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=36.01 E-value=63 Score=27.51 Aligned_cols=37 Identities=19% Similarity=0.379 Sum_probs=20.7
Q ss_pred CCcCCccCCHHHHHHHHHhhCC-----CCCCCHHHHHHHHHH
Q 010992 395 DEFGNRILTKRSIQELVNQIDP-----SERLDPDVEDILVDI 431 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDP-----sesLDpDVEELLLeI 431 (496)
+.+++..|++..|..+++.+.- ...++.++++++..+
T Consensus 26 D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~ 67 (263)
T 2f33_A 26 DADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQY 67 (263)
T ss_dssp CTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHh
Confidence 3456667777777777765521 224445555555443
No 247
>3fes_A ATP-dependent CLP endopeptidase; alpha-helical bundles, structural genomics, PSI-2, protein S initiative; HET: PG4 EPE; 1.82A {Clostridium difficile}
Probab=35.65 E-value=33 Score=28.64 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 436 VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 436 VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+..|++.|..+||.++.+.|++.+|.+.|-++
T Consensus 86 ~~~vl~~A~~~A~~~~~~~v~~eHlLlAll~~ 117 (145)
T 3fes_A 86 SKQILELSGMFANKLKTNYIGTEHILLAIIQE 117 (145)
T ss_dssp HHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccHHHHHHHHHhC
Confidence 56788999999999999999999999988654
No 248
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=35.53 E-value=86 Score=29.93 Aligned_cols=48 Identities=21% Similarity=0.272 Sum_probs=40.7
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 010992 406 SIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSD 453 (496)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSd 453 (496)
.|+.|+..-++..-++.|+.+++.+=-++|...|-....+.|+....+
T Consensus 165 sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~~~~~ 212 (253)
T 3e46_A 165 SLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSS 212 (253)
T ss_dssp HHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCSCCC
T ss_pred HHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhcccccCc
Confidence 366777777888899999999999999999999999999999875544
No 249
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=35.53 E-value=57 Score=26.94 Aligned_cols=67 Identities=15% Similarity=0.092 Sum_probs=38.2
Q ss_pred CCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcC
Q 010992 402 LTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWN 469 (496)
Q Consensus 402 LtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWN 469 (496)
++...+..||+=|= ....++++...-|+++||.|--.-+...|.-.-.+.-+.-.+.++ +.+...||
T Consensus 81 ~~~~~f~~~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~-~~~A~~~~ 148 (172)
T 3htm_A 81 VEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEI-LILADLHS 148 (172)
T ss_dssp SCHHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHH-HHHHHHTT
T ss_pred CCHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHhC
Confidence 56777888888662 334566666666888999886555555555433333222233443 33334444
No 250
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=35.26 E-value=28 Score=34.87 Aligned_cols=62 Identities=18% Similarity=0.230 Sum_probs=42.8
Q ss_pred CCHHHHHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 402 LTKRSIQELVNQIDP--SERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 402 LtKrKLqELVrqIDP--sesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
++.+.+.++++++.. +..+|+++.+.|.+.++-=+..++...+.+|. +.+.|+.+||.-.++
T Consensus 209 ~~~~~~~~~L~~i~~~~~~~i~~~~l~~la~~s~GdiR~~i~~L~~~~~--~~~~It~~~v~~~~~ 272 (516)
T 1sxj_A 209 PDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLLSTIST--TTKTINHENINEISK 272 (516)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHTTTCHHHHHHHHTHHHH--HSSCCCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHcCCcHHHHHHHHHHHHh--cCCCCchHHHHHHHH
Confidence 466677777766532 45699999999998887666777777666665 344577777755554
No 251
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=35.17 E-value=55 Score=24.62 Aligned_cols=17 Identities=0% Similarity=0.038 Sum_probs=8.5
Q ss_pred hhhhcCCCCcchhhHHH
Q 010992 446 LAKHRKSDTLEAKDILV 462 (496)
Q Consensus 446 LAKHRKSdTLEvKDVQL 462 (496)
.+-..+...|+..+..-
T Consensus 89 ~~D~~~dg~i~~~eF~~ 105 (109)
T 1bu3_A 89 AGDSDGDGAIGVDEWAA 105 (109)
T ss_dssp HHCTTCSSEECHHHHHH
T ss_pred HhCCCCCCcEeHHHHHH
Confidence 33334455566666543
No 252
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=35.15 E-value=90 Score=24.69 Aligned_cols=21 Identities=5% Similarity=0.305 Sum_probs=12.3
Q ss_pred hhhhcCCCCcchhhHHHHHhh
Q 010992 446 LAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 446 LAKHRKSdTLEvKDVQLhLER 466 (496)
.+-..+...|+..+..-.|.+
T Consensus 145 ~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 145 EADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHCCSSSSCBCHHHHHHHHC-
T ss_pred HhCCCCCCCEeHHHHHHHHHh
Confidence 333345566777777666655
No 253
>2kci_A Putative acyl carrier protein; alpha, ACP, PCP, structural genomics, unknown function, PSI- 2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 2kjs_A* 2lml_A* 2kwm_A*
Probab=34.82 E-value=7.7 Score=31.29 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=29.2
Q ss_pred HhhhhcCCCCcchhhHHHHHhhhcCccccCCCcccccccC
Q 010992 445 SLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGDEIKTFR 484 (496)
Q Consensus 445 rLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssDEIr~~r 484 (496)
.|..--+-+.|++-++...||++||+.||.--.+++++++
T Consensus 27 ~l~~dlg~DSL~~veli~~lE~eF~I~i~~ed~~~~~Tv~ 66 (87)
T 2kci_A 27 SANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVG 66 (87)
T ss_dssp CSTTCCCCCSTHHHHHHHHHHHHHTCCCCHHHHTTCCSHH
T ss_pred CcccccCCChHHHHHHHHHHHHHHCCccCHHHHHhCCCHH
Confidence 4455567788899999999999999999754444555443
No 254
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=34.72 E-value=1e+02 Score=25.07 Aligned_cols=31 Identities=6% Similarity=0.102 Sum_probs=20.9
Q ss_pred HHHHHHHHhhhhcCCCCcchhhHHHHHhhhc
Q 010992 438 SITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 438 sVvt~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (496)
..+..+.+..-..+...|+..++.-.|...|
T Consensus 99 ~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~ 129 (193)
T 1bjf_A 99 QKLKWAFSMYDLDGNGYISKAEMLEIVQAIY 129 (193)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCCCeECHHHHHHHHHHHH
Confidence 3344555566566777889999887777653
No 255
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=34.61 E-value=85 Score=28.47 Aligned_cols=63 Identities=17% Similarity=0.373 Sum_probs=39.9
Q ss_pred ccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc-chhhHHHHHhhhcCccccCC
Q 010992 400 RILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTL-EAKDILVHLERNWNMTLPGF 475 (496)
Q Consensus 400 rILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTL-EvKDVQLhLERnWNI~IPGF 475 (496)
.|-+|+-|++|++-|.. ..+.+|.+-+|+|.++|.+.. ++...+ .+.|+--.|++. |+.||..
T Consensus 80 eva~~~fl~~l~~l~~~--~~~~~Vk~kil~li~~W~~~f----------~~~~~~~~i~~~y~~Lk~~-G~~FP~~ 143 (220)
T 1dvp_A 80 EVFTKENCEMFSSFLES--TPHENVRQKMLELVQTWAYAF----------RSSDKYQAIKDTMTILKAK-GHTFPEL 143 (220)
T ss_dssp HHSSHHHHHHHHHHHHH--CSCHHHHHHHHHHHHHHHHHT----------TTCSSCCHHHHHHHHHHHT-TCCCCCC
T ss_pred HHHhHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHHHHh----------ccchHHHHHHHHHHHHhhc-Ccccccc
Confidence 35578888888887643 357899999999999888752 111111 245664455554 5666664
No 256
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=34.58 E-value=1e+02 Score=25.61 Aligned_cols=69 Identities=7% Similarity=0.168 Sum_probs=36.9
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH----------HHHHHHH-----------HHHHHHhhhhcCCCCcc
Q 010992 398 GNRILTKRSIQELVNQIDPSERLDPDVEDILVDIA----------EDFVESI-----------TMFGCSLAKHRKSDTLE 456 (496)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIA----------DDFVDsV-----------vt~ACrLAKHRKSdTLE 456 (496)
++..|++..|..+++.+.. .++.+..+.|.+.. +||+.-+ +..+.++.-..+...|+
T Consensus 36 ~~G~i~~~e~~~~l~~~~~--~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~ 113 (204)
T 1jba_A 36 PSGTLFMHEFKRFFKVPDN--EEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCID 113 (204)
T ss_dssp TTCCEEHHHHHHHHHCCSS--STTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBC
T ss_pred CCCCcCHHHHHHHHHHhcC--CCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHHHHHHHhCCCCCCcCc
Confidence 4556677777766666544 23333222232222 2444332 33445555555666788
Q ss_pred hhhHHHHHhhhc
Q 010992 457 AKDILVHLERNW 468 (496)
Q Consensus 457 vKDVQLhLERnW 468 (496)
..++.-.|...+
T Consensus 114 ~~E~~~~l~~~~ 125 (204)
T 1jba_A 114 RQELLDIVESIY 125 (204)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888877776653
No 257
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=34.50 E-value=46 Score=31.52 Aligned_cols=38 Identities=8% Similarity=0.163 Sum_probs=25.9
Q ss_pred HHHHHHHHHhhCCCCCCCH--------HHHHHHH------HHHHHHHHHHHH
Q 010992 404 KRSIQELVNQIDPSERLDP--------DVEDILV------DIAEDFVESITM 441 (496)
Q Consensus 404 KrKLqELVrqIDPsesLDp--------DVEELLL------eIADDFVDsVvt 441 (496)
.++|...++++-....||+ |++++|+ ++|++||++|-+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dv~~~~~~~~~~~~~~ 55 (297)
T 1j8m_F 4 LDNLRDTVRKFLTGSSSYDKAVEDFIKELQKSLISADVNVKLVFSLTNKIKE 55 (297)
T ss_dssp HHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 3568888888877778887 4555565 456666666644
No 258
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=34.43 E-value=74 Score=22.75 Aligned_cols=19 Identities=11% Similarity=0.114 Sum_probs=11.5
Q ss_pred cCCCCcchhhHHHHHhhhc
Q 010992 450 RKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 450 RKSdTLEvKDVQLhLERnW 468 (496)
.+...|+..+..-.+.+.+
T Consensus 62 ~~~g~i~~~eF~~~~~~~~ 80 (85)
T 2ktg_A 62 DNSGKFDQETFLTIMLEYG 80 (85)
T ss_dssp SSCSEEEHHHHHHHHHHHS
T ss_pred CCCCcCcHHHHHHHHHHHh
Confidence 3455677777766665544
No 259
>4h5l_A Nucleoprotein; nucleocapsid protein, N protein, RNA binding, RNP, viral protein; 2.75A {Toscana virus}
Probab=34.22 E-value=71 Score=31.31 Aligned_cols=86 Identities=16% Similarity=0.236 Sum_probs=61.1
Q ss_pred cCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHHHH----HHHHHHHHHHHHHhhhhcCCCCc--------chhhHHHH
Q 010992 397 FGNRILTKRSIQELVNQIDPSERLDPD-VEDILVDIA----EDFVESITMFGCSLAKHRKSDTL--------EAKDILVH 463 (496)
Q Consensus 397 ~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLeIA----DDFVDsVvt~ACrLAKHRKSdTL--------EvKDVQLh 463 (496)
-++..+....|.++|.++. -.-+|.. |..+|.|-+ |+|.+|+ ....-|+--||...- |-|...-.
T Consensus 13 ~~~~~~d~~~i~~~v~~f~-YqGFDa~~vi~~l~erg~~~g~~~~~D~-k~mIVl~ltRGNk~~km~~kms~~Gk~~~~~ 90 (253)
T 4h5l_A 13 FLDESADSGTINAWVNEFA-YQGFDPKRIVQLVKERGTAKGRDWKKDV-KMMIVLNLVRGNKPEAMMKKMSEKGASIVAN 90 (253)
T ss_dssp TTSSCCCHHHHHHHHHHHS-BCSSCHHHHHHHHHHHHHHTTCCHHHHH-HHHHHHHHHHCSCHHHHHHTSCHHHHHHHHH
T ss_pred HhcccccHHHHHHHHHHHH-hcCCCHHHHHHHHHHHhccchhhHHHhH-HHHhhhhhhcCCCHHHHHHHhCHHHHHHHHH
Confidence 3566788889999999983 3457766 677888887 7899998 566677877874411 33455566
Q ss_pred HhhhcCccccCCCcccccccC
Q 010992 464 LERNWNMTLPGFSGDEIKTFR 484 (496)
Q Consensus 464 LERnWNI~IPGFssDEIr~~r 484 (496)
|-..|||..-+-+.|+|-.-|
T Consensus 91 Li~~Y~Lk~~~~~r~~lTLsR 111 (253)
T 4h5l_A 91 LISVYQLKEGNPGRDTITLSR 111 (253)
T ss_dssp HHHHHTBCSSSCCTTCBCHHH
T ss_pred HHHHhCcccCCCCcccccHHH
Confidence 777899998766777765443
No 260
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=34.12 E-value=1.3e+02 Score=25.13 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=18.8
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCH-HHHHHHHH
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDP-DVEDILVD 430 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDp-DVEELLLe 430 (496)
+.+++..|++..|.++++.+. ..+++ ++++++.+
T Consensus 113 D~d~~G~I~~~el~~~l~~~g--~~~~~~~~~~l~~~ 147 (198)
T 1juo_A 113 DTDRSGTVDPQELQKALTTMG--FRLSPQAVNSIAKR 147 (198)
T ss_dssp CTTCCSEECHHHHHHHHHHTT--CCCCHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHhC--CCCCHHHHHHHHHH
Confidence 445556677777777777653 23433 34444443
No 261
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=33.94 E-value=62 Score=27.83 Aligned_cols=18 Identities=17% Similarity=0.270 Sum_probs=9.3
Q ss_pred chhhHHHHHhhhcCcccc
Q 010992 456 EAKDILVHLERNWNMTLP 473 (496)
Q Consensus 456 EvKDVQLhLERnWNI~IP 473 (496)
+||+-.+.|=..|...|.
T Consensus 100 ~Vk~kil~li~~W~~~f~ 117 (140)
T 3ldz_A 100 KVCEKLKALMVEWTDEFK 117 (140)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 455555555555555544
No 262
>2zc2_A DNAD-like replication protein; GI 24377835, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Streptococcus mutans UA159}
Probab=33.81 E-value=42 Score=25.72 Aligned_cols=32 Identities=16% Similarity=-0.022 Sum_probs=23.6
Q ss_pred CCCHHHHHHHHHHHHH--HHHHHHHHHHHhhhhc
Q 010992 419 RLDPDVEDILVDIAED--FVESITMFGCSLAKHR 450 (496)
Q Consensus 419 sLDpDVEELLLeIADD--FVDsVvt~ACrLAKHR 450 (496)
.|.+--.+.|.++.|+ |=.+||..||+.|...
T Consensus 17 ~ls~~e~~~i~~w~~~~~~~~elI~~A~~~a~~~ 50 (78)
T 2zc2_A 17 MLSPFELEDLQKTVSDDKTDPDLVRSALREAVFN 50 (78)
T ss_dssp CCCHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHc
Confidence 5667667777777777 7778888888888643
No 263
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=33.74 E-value=1.1e+02 Score=23.79 Aligned_cols=43 Identities=14% Similarity=0.376 Sum_probs=26.2
Q ss_pred ccCCHHHHHHHHHh-hCC--CCCCCH-HHHHHHHHH---------HHHHHHHHHHH
Q 010992 400 RILTKRSIQELVNQ-IDP--SERLDP-DVEDILVDI---------AEDFVESITMF 442 (496)
Q Consensus 400 rILtKrKLqELVrq-IDP--sesLDp-DVEELLLeI---------ADDFVDsVvt~ 442 (496)
..|++..|..+++. +.. ...+++ +|++++.++ -+|||.-+...
T Consensus 27 G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 27 FKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp TSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred CeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 58999999999985 532 233444 466665554 34777655443
No 264
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=33.70 E-value=1.7e+02 Score=22.95 Aligned_cols=70 Identities=16% Similarity=0.202 Sum_probs=41.6
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCH-HHHHHHHHH-----HHHHHHH------------HHHHHHHhhhhcCCCCcc
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDP-DVEDILVDI-----AEDFVES------------ITMFGCSLAKHRKSDTLE 456 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDp-DVEELLLeI-----ADDFVDs------------Vvt~ACrLAKHRKSdTLE 456 (496)
+.+++..|++..|..+++.++. .+++ ++++++.+. .++|+.- .+..++++.-..+...|+
T Consensus 28 D~d~~G~i~~~el~~~l~~~g~--~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~ 105 (156)
T 1wdc_B 28 DVDRDGFVSKEDIKAISEQLGR--APDDKELTAMLKEAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLN 105 (156)
T ss_dssp CTTCSSSCCHHHHHHHHHHHSS--CCCHHHHHHHHTTSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHHHTTCTTCCSCEE
T ss_pred CCCCCCcCcHHHHHHHHHHhCC--CCCHHHHHHHHHhCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCcCCCCccC
Confidence 4567778888889888888743 2333 344333210 1234432 344455555555666788
Q ss_pred hhhHHHHHhh
Q 010992 457 AKDILVHLER 466 (496)
Q Consensus 457 vKDVQLhLER 466 (496)
..++..+|.+
T Consensus 106 ~~el~~~l~~ 115 (156)
T 1wdc_B 106 IEYIKDLLEN 115 (156)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888877765
No 265
>3fh2_A Probable ATP-dependent protease (heat shock prote; struct genomics, PSI2, MCSG, protein structure initiative; 1.60A {Corynebacterium glutamicum}
Probab=33.55 E-value=38 Score=28.25 Aligned_cols=32 Identities=9% Similarity=0.082 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 436 VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 436 VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+..|++.|..+|+.++.+.|++.+|.+.|-++
T Consensus 86 ~~~vL~~A~~~a~~~~~~~i~~eHlLlall~~ 117 (146)
T 3fh2_A 86 AKKVLELSLREGLQMGHKYIGTEFLLLGLIRE 117 (146)
T ss_dssp HHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcCcHHHHHHHHHhC
Confidence 45788899999999999999999999988654
No 266
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=33.23 E-value=1.3e+02 Score=28.16 Aligned_cols=18 Identities=17% Similarity=0.353 Sum_probs=9.6
Q ss_pred HHHHHHHHhhCCCCCCCH
Q 010992 405 RSIQELVNQIDPSERLDP 422 (496)
Q Consensus 405 rKLqELVrqIDPsesLDp 422 (496)
++|...++++-....||+
T Consensus 7 ~~~~~~~~~~~~~~~~~~ 24 (295)
T 1ls1_A 7 ARLQEAIGRLRGRGRITE 24 (295)
T ss_dssp HHHHHHHHTTTTSCSCCH
T ss_pred HHHHHHHHHHhCCCCCCH
Confidence 445555555555555553
No 267
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=33.15 E-value=95 Score=26.20 Aligned_cols=74 Identities=12% Similarity=0.210 Sum_probs=44.4
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH---------HHHHHH------------HHHHHHHHhhhhcCCC
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI---------AEDFVE------------SITMFGCSLAKHRKSD 453 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI---------ADDFVD------------sVvt~ACrLAKHRKSd 453 (496)
+.+++..|++..|..+++.++.. .-+.++++++.++ .++|+. +-+..|+++--.-++.
T Consensus 21 D~d~dG~I~~~El~~~l~~lg~~-~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G 99 (176)
T 2lhi_A 21 DKDNNGSISSSELATVMRSLGLS-PSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDG 99 (176)
T ss_dssp CSSCSSCBCHHHHHHHHHHHTCC-CCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHHHHHHHHHHHCSSCSS
T ss_pred CCCCCCCCCHHHHHHHHHHcCCC-hhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHHHHHHHHHHhCCCCCC
Confidence 45667788888888888776432 1223333333322 123432 3355666666667777
Q ss_pred CcchhhHHHHHhhhcCc
Q 010992 454 TLEAKDILVHLERNWNM 470 (496)
Q Consensus 454 TLEvKDVQLhLERnWNI 470 (496)
.|+..++.-+|.. ++.
T Consensus 100 ~I~~~el~~~l~~-~g~ 115 (176)
T 2lhi_A 100 LISAAELKHVLTS-IGE 115 (176)
T ss_dssp SBCHHHHHHHHHT-TTC
T ss_pred cCcHHHHHHHHHH-cCc
Confidence 8999999888765 344
No 268
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=33.13 E-value=18 Score=33.81 Aligned_cols=15 Identities=13% Similarity=-0.073 Sum_probs=5.8
Q ss_pred HHHHHHHHHhhhhcC
Q 010992 437 ESITMFGCSLAKHRK 451 (496)
Q Consensus 437 DsVvt~ACrLAKHRK 451 (496)
..++...+++|+..+
T Consensus 219 ~~~~~E~~~va~a~G 233 (320)
T 3i83_A 219 RAIMQEIRAVAAANG 233 (320)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 333333334444333
No 269
>1exe_A Transcription factor 1; beta ribbon ARMS, DNA-binding, DNA-bending protein; NMR {Bacillus phage SPO1} SCOP: a.55.1.1 PDB: 1wtu_A
Probab=33.10 E-value=1.2e+02 Score=24.48 Aligned_cols=18 Identities=17% Similarity=0.209 Sum_probs=11.5
Q ss_pred HhhhcCccccCCCccccc
Q 010992 464 LERNWNMTLPGFSGDEIK 481 (496)
Q Consensus 464 LERnWNI~IPGFssDEIr 481 (496)
|++...+.|+|||.=+++
T Consensus 36 L~~G~~V~l~gfG~F~v~ 53 (99)
T 1exe_A 36 VAKGDKVQLTGFLNIKPV 53 (99)
T ss_dssp HHHTCCCCBTTTBCCCCC
T ss_pred HHCCCeEEECCceEEEEE
Confidence 444556777788876655
No 270
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=32.97 E-value=23 Score=24.07 Aligned_cols=55 Identities=11% Similarity=0.097 Sum_probs=30.3
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+.+++..|++..|..+++.+. ..+.++..+.|+ +.+-..+...|+..+..-.+.+
T Consensus 11 D~d~~G~i~~~el~~~l~~~~--~~~~~~~~~~~~---------------~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 11 DKNKDGKLSLDEFREVALAFS--PYFTQEDIVKFF---------------EEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp CTTSSSCEEHHHHHHHHHHTC--TTSCHHHHHHHH---------------HHHCCSSSSEECHHHHHHHHHT
T ss_pred CCCCCCcCcHHHHHHHHHHhC--CCCCHHHHHHHH---------------HHHCCCCCCcCcHHHHHHHHHH
Confidence 345566788888888888763 233333222222 2222335556777776655554
No 271
>2vof_A BCL-2-related protein A1; BH3, apoptosis, Pro-surviVal, mitochondrion, protein- complex; 1.8A {Mus musculus} PDB: 2vog_A 2voh_A* 2voi_A 3i1h_A 3mqp_A 2vm6_A
Probab=32.84 E-value=18 Score=31.79 Aligned_cols=30 Identities=30% Similarity=0.299 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHH----------HHHHHHHhhhhcC
Q 010992 422 PDVEDILVDIAEDFVES----------ITMFGCSLAKHRK 451 (496)
Q Consensus 422 pDVEELLLeIADDFVDs----------Vvt~ACrLAKHRK 451 (496)
+.+.+.+.++||++.+| ++.|++.||++-.
T Consensus 70 ~~a~~~f~~Va~elF~dg~inWGRIVal~~F~g~la~~~~ 109 (157)
T 2vof_A 70 DTARIIFNQVMEKEFEDGIINWGRIVTIFAFGGVLLKKLK 109 (157)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45888999999998776 4689999999743
No 272
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=32.60 E-value=1.4e+02 Score=24.17 Aligned_cols=36 Identities=11% Similarity=0.067 Sum_probs=17.1
Q ss_pred HhhhhcCCCCcchhhHHHHHh----hhcCccccCCCcccc
Q 010992 445 SLAKHRKSDTLEAKDILVHLE----RNWNMTLPGFSGDEI 480 (496)
Q Consensus 445 rLAKHRKSdTLEvKDVQLhLE----RnWNI~IPGFssDEI 480 (496)
++|-..+...|+..+....+. +.-|..||......+
T Consensus 55 ~~~D~d~dG~id~~EF~~~m~~~~~~~~g~~lP~~LP~~l 94 (106)
T 1eh2_A 55 ELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPAL 94 (106)
T ss_dssp HHHCSSCSSBCCHHHHHHHHHHHHHHHHTCCCCSSCCTTT
T ss_pred HHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCCCCCCCccc
Confidence 344445555566655422221 122556666555544
No 273
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=32.57 E-value=51 Score=29.04 Aligned_cols=52 Identities=13% Similarity=0.123 Sum_probs=34.1
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 010992 398 GNRILTKRSIQELVNQIDPSERLDP-DVEDILVDIAEDFVESITMFGCSLAKHRKSD 453 (496)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDp-DVEELLLeIADDFVDsVvt~ACrLAKHRKSd 453 (496)
+..+-....|.+++++++ ||. |+++++..+.++=+.+.+....++|+.++-.
T Consensus 129 ~~~i~~~~~L~~~a~~~G----l~~~d~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~ 181 (226)
T 1r4w_A 129 DEDITESQNILSAAEKAG----MATAQAQHLLNKISTELVKSKLRETTGAACKYGAF 181 (226)
T ss_dssp CCCCSSHHHHHHHHHHTT----CCHHHHHHHHTTTTSHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHcC----CCchhHHHHHHHcCCHHHHHHHHHHHHHHHHCCCC
Confidence 334556777888887753 565 4667766665666667777777777766544
No 274
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=32.39 E-value=71 Score=25.23 Aligned_cols=17 Identities=6% Similarity=0.200 Sum_probs=9.6
Q ss_pred cCCCCcchhhHHHHHhh
Q 010992 450 RKSDTLEAKDILVHLER 466 (496)
Q Consensus 450 RKSdTLEvKDVQLhLER 466 (496)
.+...|+..+..-.|.+
T Consensus 135 d~dg~i~~~eF~~~~~~ 151 (159)
T 2ovk_C 135 DIDGNIKYEDLMKKVMA 151 (159)
T ss_dssp CTTCCEEHHHHHHHHHH
T ss_pred CCCCcEeHHHHHHHHhc
Confidence 34555667666555544
No 275
>2p61_A Hypothetical protein TM_1646; structural genomics, unknown function, PSI-2, protein structure initiative; 2.70A {Thermotoga maritima MSB8} SCOP: a.24.29.1
Probab=32.36 E-value=31 Score=31.20 Aligned_cols=44 Identities=16% Similarity=0.164 Sum_probs=32.4
Q ss_pred CHHHHHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010992 403 TKRSIQELVNQIDPS-----ERLDPDVEDILVDIAEDFVESITMFGCSL 446 (496)
Q Consensus 403 tKrKLqELVrqIDPs-----esLDpDVEELLLeIADDFVDsVvt~ACrL 446 (496)
....|.+|+.+||.. ...+-+-...-.++.-+|++.|+..+.+|
T Consensus 49 ~~e~L~~Ll~~I~~~G~rL~~~~t~~~l~~YK~lVK~FL~~vv~~~~~l 97 (162)
T 2p61_A 49 FEKLLEEAVEEVIDSGNELVRSPTPSNLKRYKNAIKEFLKLIEKKIYKL 97 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 356788999998642 24444444455689999999999999999
No 276
>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis}
Probab=32.33 E-value=6.2 Score=29.15 Aligned_cols=25 Identities=16% Similarity=0.542 Sum_probs=21.5
Q ss_pred cCCCCcchhhHHHHHhhhcCccccC
Q 010992 450 RKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
-|-+.|.+-++...||++||+.|+-
T Consensus 34 lG~DSl~~~~l~~~le~~fgi~i~~ 58 (79)
T 2l3v_A 34 LGADSLDTVELVMAFEEEFGVEIPD 58 (79)
T ss_dssp TCCCSSSSSSTTTTHHHHTTCCCCH
T ss_pred cCCCHHHHHHHHHHHHHHHCCCCCH
Confidence 3778888999999999999999863
No 277
>3qbr_A SJA, sjchgc06286 protein; helical bundle, BCL-2-like fold, apoptosis; HET: NHE; 2.60A {Schistosoma japonicum}
Probab=32.32 E-value=85 Score=29.19 Aligned_cols=49 Identities=14% Similarity=0.233 Sum_probs=35.4
Q ss_pred HHHHHHhh--CCCCCCCHH-HHHHHHHHHHHH--------HHHHHHHHHHhhhhcCCCCc
Q 010992 407 IQELVNQI--DPSERLDPD-VEDILVDIAEDF--------VESITMFGCSLAKHRKSDTL 455 (496)
Q Consensus 407 LqELVrqI--DPsesLDpD-VEELLLeIADDF--------VDsVvt~ACrLAKHRKSdTL 455 (496)
|.+|++++ ++...|+++ |++.+.++||+- |-.++.|++.||++-....+
T Consensus 82 l~~l~~ql~~~~~~~lt~~tA~~~F~~Va~eLFDGiNWGRIVaLfaFgg~La~~~~~~g~ 141 (179)
T 3qbr_A 82 IEPVAQSLGIDSDKPVDKTALEIFYLEILNGLFEKLNWGRIVAMFAFLRILVLRLSKHGH 141 (179)
T ss_dssp SHHHHHHHTCSSSSCCCHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHhhccccccCCCchHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHcCc
Confidence 45566655 455567666 789999999964 44577899999999776543
No 278
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=32.30 E-value=18 Score=33.17 Aligned_cols=55 Identities=11% Similarity=0.093 Sum_probs=33.5
Q ss_pred CCCCCHHHHHHHHHHHH--HHHHHHHHHHHHhhh----hcCCCCc-chhhHHHHHhhhcCcc
Q 010992 417 SERLDPDVEDILVDIAE--DFVESITMFGCSLAK----HRKSDTL-EAKDILVHLERNWNMT 471 (496)
Q Consensus 417 sesLDpDVEELLLeIAD--DFVDsVvt~ACrLAK----HRKSdTL-EvKDVQLhLERnWNI~ 471 (496)
+..+++|+.+.|.+.+. .-++++++.+|...+ ..+...| +.+||+-+++..||+.
T Consensus 183 ~~~l~~~~l~~l~~~~g~~r~l~~~l~~~~~~~~~~l~~~~~~~i~t~~~i~~~~~~~~~~~ 244 (324)
T 1l8q_A 183 NLELRKEVIDYLLENTKNVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVK 244 (324)
T ss_dssp TCCCCHHHHHHHHHHCSSHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCHHHHHHHHHhCCCHHHHHHHHHHHHHcCHHHhccccccCCCCHHHHHHHHHHHhCCC
Confidence 45789998888877650 113345555554410 0122346 7788888888888853
No 279
>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=32.14 E-value=5.9 Score=30.13 Aligned_cols=25 Identities=12% Similarity=0.383 Sum_probs=21.0
Q ss_pred cCC-CCcchhhHHHHHhhhcCccccC
Q 010992 450 RKS-DTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 450 RKS-dTLEvKDVQLhLERnWNI~IPG 474 (496)
-+- +.|.+-++...||++||+.|+-
T Consensus 34 lg~~DSl~~~elv~~lE~~fgi~i~~ 59 (83)
T 2amw_A 34 IPELDSMAVVNVITALEEYFDFSVDD 59 (83)
T ss_dssp STTTTHHHHHHHHHHHHHHTTCCCCT
T ss_pred cCccCHHHHHHHHHHHHHHhCCeeCH
Confidence 455 7788888999999999999974
No 280
>2kua_A BCL-2-like protein 10; BOO, DIVA, apoptosis, BH3-only, membrane, mitochondri nucleus, transmembrane; NMR {Mus musculus}
Probab=32.08 E-value=38 Score=30.56 Aligned_cols=30 Identities=10% Similarity=0.245 Sum_probs=25.0
Q ss_pred CCHHHHHHHHHHHHH-HHH----------HHHHHHHHhhhh
Q 010992 420 LDPDVEDILVDIAED-FVE----------SITMFGCSLAKH 449 (496)
Q Consensus 420 LDpDVEELLLeIADD-FVD----------sVvt~ACrLAKH 449 (496)
-.+++.+++..||++ |-| .++.|++.||+|
T Consensus 68 ~~~~a~~~f~~Va~elF~ddg~iNWGRIVaLfaF~g~La~~ 108 (170)
T 2kua_A 68 SRGNRLELVKQMADKLLSKDQDFSWSQLVMLLAFAGTLMNQ 108 (170)
T ss_dssp TTSCHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHCCC
T ss_pred CcchHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHh
Confidence 455688999999999 655 588999999999
No 281
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=32.01 E-value=66 Score=27.67 Aligned_cols=35 Identities=14% Similarity=0.116 Sum_probs=20.2
Q ss_pred CCcCCccCCHHHHHHHHHh-hCCCCCCCHHHHHHHHH
Q 010992 395 DEFGNRILTKRSIQELVNQ-IDPSERLDPDVEDILVD 430 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrq-IDPsesLDpDVEELLLe 430 (496)
+.+++..|++..|..+++. ++. ..-+.++++++.+
T Consensus 58 D~d~dG~I~~~El~~~l~~~lg~-~~~~~~~~~~~~~ 93 (219)
T 3cs1_A 58 DKNETGKLCYDEVYSGCLEVLKL-DEFTSRVRDITKR 93 (219)
T ss_dssp CTTCSSCBCHHHHHHHHHHTTCG-GGTCSCHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHHhCC-CccHHHHHHHHHH
Confidence 4466777888888877776 332 2223445554443
No 282
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=31.96 E-value=70 Score=32.13 Aligned_cols=39 Identities=15% Similarity=0.321 Sum_probs=27.6
Q ss_pred HHHHHHHHHhhCCCCCCCH--------HHHHHHH------HHHHHHHHHHHHH
Q 010992 404 KRSIQELVNQIDPSERLDP--------DVEDILV------DIAEDFVESITMF 442 (496)
Q Consensus 404 KrKLqELVrqIDPsesLDp--------DVEELLL------eIADDFVDsVvt~ 442 (496)
+++|...++.+-....||+ |++++|+ +++++||++|-+.
T Consensus 6 ~~~l~~~~~~~~~~~~~~e~~~~~~l~e~~~~Ll~adv~~~~~~~~~~~~~~~ 58 (433)
T 2xxa_A 6 TDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEK 58 (433)
T ss_dssp HHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 4568888888888888887 4555554 4677777777554
No 283
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=31.87 E-value=97 Score=26.89 Aligned_cols=77 Identities=12% Similarity=0.113 Sum_probs=45.0
Q ss_pred CHHHHHHHHHhhC-CCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh----hhcCccccCCC
Q 010992 403 TKRSIQELVNQID-PSERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE----RNWNMTLPGFS 476 (496)
Q Consensus 403 tKrKLqELVrqID-PsesLDpD-VEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLE----RnWNI~IPGFs 476 (496)
.+.+|.++.+.+| .+-.|+.+ +.++|..+ .+-++.+...+++|-..+...|+..+....+. +.-|+.||...
T Consensus 49 e~~~l~~~F~~fDd~dG~Is~~El~~~l~~~--gl~~~el~~I~~~~D~d~dG~Ld~~EF~~am~li~~~~~G~~lP~~L 126 (139)
T 2jq6_A 49 DKPTYDEIFYTLSPVNGKITGANAKKEMVKS--KLPNTVLGKIWKLADVDKDGLLDDEEFALANHLIKVKLEGHELPADL 126 (139)
T ss_dssp THHHHHHHHHHSCCSSSEEEHHHHHHHHHHT--TCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHHHTTSCCCSCC
T ss_pred HHHHHHHHHHHhCCCCCeECHHHHHHHHHHh--CcCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHcCCCCCccc
Confidence 3667788888887 22245544 44555432 23345566666777777777788777533322 22367777666
Q ss_pred ccccc
Q 010992 477 GDEIK 481 (496)
Q Consensus 477 sDEIr 481 (496)
.+.+.
T Consensus 127 P~~l~ 131 (139)
T 2jq6_A 127 PPHLV 131 (139)
T ss_dssp CTTSS
T ss_pred CcccC
Confidence 65553
No 284
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=31.79 E-value=49 Score=24.91 Aligned_cols=63 Identities=10% Similarity=0.059 Sum_probs=29.5
Q ss_pred HHHHHHHHhhCCC--CCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 405 RSIQELVNQIDPS--ERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 405 rKLqELVrqIDPs--esLDpD-VEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
..|.++.+.+|.+ ..|+.+ ...+|..+...+-+..+...++.+-..+...|+..+..-.|.+.
T Consensus 24 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~~ 89 (105)
T 1wlz_A 24 HAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSSE 89 (105)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC--
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcc
Confidence 3444555555432 234433 33444333322333333333344444566678888886666654
No 285
>2f05_A Paired amphipathic helix protein SIN3B; helix bundle, transcription repressor; NMR {Mus musculus} SCOP: a.59.1.1
Probab=31.51 E-value=42 Score=28.50 Aligned_cols=74 Identities=14% Similarity=0.135 Sum_probs=38.1
Q ss_pred HHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH----------------HHHHHHHhhhhcCCCCcchhhHHHHHhhhcCc
Q 010992 407 IQELVNQIDPSERLDPDVEDILVDIAEDFVES----------------ITMFGCSLAKHRKSDTLEAKDILVHLERNWNM 470 (496)
Q Consensus 407 LqELVrqIDPsesLDpDVEELLLeIADDFVDs----------------Vvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI 470 (496)
-...|++|-....=++++.+.+|+|..+|-.. |+.....|=+ +-.-| +.+....|-..|.+
T Consensus 10 A~~YvnkVK~rF~d~p~vY~~FL~IL~~yk~~~~d~~g~~~~~~s~~eV~~~V~~LF~--~hpDL-l~eFn~FLP~~~~~ 86 (105)
T 2f05_A 10 AISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFR--GQEDL-LSEFGQFLPEAKRS 86 (105)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSSSSSSSSCCCCHHHHHHHHHHHTT--TCHHH-HHHHHHHSCGGGC-
T ss_pred HHHHHHHHHHHHccChHHHHHHHHHHHHHHhccccccccccccCcHHHHHHHHHHHHc--cCHHH-HHHHHHHCCCcccc
Confidence 34567777555555999999999999999754 4443333332 22223 55556666677777
Q ss_pred cccCCCccccccc
Q 010992 471 TLPGFSGDEIKTF 483 (496)
Q Consensus 471 ~IPGFssDEIr~~ 483 (496)
.+++-+.+.....
T Consensus 87 ~~~~~~~~~~~~~ 99 (105)
T 2f05_A 87 LFTGNGSCEMNSG 99 (105)
T ss_dssp -------------
T ss_pred CCCCchhhhhhhh
Confidence 7777766554433
No 286
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=31.50 E-value=68 Score=26.82 Aligned_cols=27 Identities=4% Similarity=0.080 Sum_probs=17.3
Q ss_pred HHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 440 TMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 440 vt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+..++++.-..+...|+..++.-.|..
T Consensus 130 ~~~~F~~~D~d~~G~Is~~El~~~l~~ 156 (208)
T 2hpk_A 130 SNSYYDVLDDDGDGTVDVDELKTMMKA 156 (208)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 444555555556677888888777754
No 287
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=31.47 E-value=97 Score=30.12 Aligned_cols=73 Identities=10% Similarity=0.023 Sum_probs=51.4
Q ss_pred HHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccCCCcccc
Q 010992 405 RSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGDEI 480 (496)
Q Consensus 405 rKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssDEI 480 (496)
..+++|+++. + +..++|.++.+.+|.++-|+.-+.+++.+-. ++---|+.+||.-+++-+.|.++=.+|-+.+
T Consensus 229 ~l~~~l~~e~-~-~~~~~e~~~~v~~l~~eav~~E~~~~~~~~~-~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~ 301 (346)
T 2rcc_A 229 NIFKELLVEF-P-ELNTEETKTFVKTTLMKAADLEKDWFRYIIG-DKIPGINPEDMETYISFIANKRAVQLGMEKP 301 (346)
T ss_dssp HHHHHHHHHC-G-GGCSHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCSTTCCHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHhcC-C-hhccHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCCCCCHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4455666643 2 3468888999999999999988888877764 2334466789988888777777655555443
No 288
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=31.46 E-value=52 Score=30.46 Aligned_cols=64 Identities=14% Similarity=0.196 Sum_probs=41.3
Q ss_pred CCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---CCCCcchhhHHHHHh
Q 010992 402 LTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHR---KSDTLEAKDILVHLE 465 (496)
Q Consensus 402 LtKrKLqELVrqID--PsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHR---KSdTLEvKDVQLhLE 465 (496)
+++..+.+.++++- .+..|++++.+.|.++++-=+..++...+.++..- +.+.++..||.-.+.
T Consensus 169 l~~~~~~~~l~~~~~~~~~~i~~~~~~~i~~~s~G~~r~~~~~l~~~~~~~~~~~~~~it~~~v~~~~~ 237 (340)
T 1sxj_C 169 LPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCG 237 (340)
T ss_dssp CCHHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTTCHHHHHHHTTTTTTTTCSSSCCCBCHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCcccccccHHHHHHHhC
Confidence 45667777666654 45679999999999998865556655555554332 234577777654443
No 289
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=31.34 E-value=95 Score=25.11 Aligned_cols=44 Identities=16% Similarity=0.186 Sum_probs=28.7
Q ss_pred ccCCHHHHHHHHHhhCCCCCC-CHHHHHHHHHH---------HHHHHHHHHHHH
Q 010992 400 RILTKRSIQELVNQIDPSERL-DPDVEDILVDI---------AEDFVESITMFG 443 (496)
Q Consensus 400 rILtKrKLqELVrqIDPsesL-DpDVEELLLeI---------ADDFVDsVvt~A 443 (496)
..|++..|..+++..-+.... +.+|+++|.++ -+|||.-+...+
T Consensus 39 G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~~ 92 (106)
T 2h2k_A 39 DSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELA 92 (106)
T ss_dssp TEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred CEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence 489999999999863222212 36788877765 247877665543
No 290
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=31.32 E-value=65 Score=24.48 Aligned_cols=35 Identities=17% Similarity=0.497 Sum_probs=24.3
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHHH
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPD-VEDILVDI 431 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLeI 431 (496)
+.+++..|++..|..+++.+. ..++++ +++++.++
T Consensus 39 D~d~~G~I~~~El~~~l~~~g--~~~~~~e~~~l~~~~ 74 (94)
T 2kz2_A 39 DKDGNGYISAAELRHVMTNLG--EKLTDEEVDEMIREA 74 (94)
T ss_dssp CTTCCSCBCHHHHHHHHHHHT--CCCCHHHHHHHHHHH
T ss_pred CCCCcCcCCHHHHHHHHHHhC--CCCCHHHHHHHHHHh
Confidence 456777899999999999985 345554 55544443
No 291
>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1
Probab=31.14 E-value=6.8 Score=31.98 Aligned_cols=12 Identities=8% Similarity=0.296 Sum_probs=5.6
Q ss_pred chhhHHHHHhhh
Q 010992 456 EAKDILVHLERN 467 (496)
Q Consensus 456 EvKDVQLhLERn 467 (496)
.++||.-++++.
T Consensus 69 Tv~~l~~~i~~~ 80 (115)
T 1klp_A 69 TVGDVVAYIQKL 80 (115)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 355554444433
No 292
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=31.13 E-value=1e+02 Score=24.10 Aligned_cols=18 Identities=11% Similarity=0.433 Sum_probs=9.4
Q ss_pred cCCccCCHHHHHHHHHhh
Q 010992 397 FGNRILTKRSIQELVNQI 414 (496)
Q Consensus 397 ~~nrILtKrKLqELVrqI 414 (496)
+++..|++..|..+++.+
T Consensus 95 d~~G~I~~~el~~~l~~~ 112 (148)
T 1exr_A 95 DGNGLISAAELRHVMTNL 112 (148)
T ss_dssp TCSSCBCHHHHHHHHHHT
T ss_pred CCCCcCCHHHHHHHHHHh
Confidence 344445555555555554
No 293
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=31.13 E-value=58 Score=26.37 Aligned_cols=68 Identities=3% Similarity=0.142 Sum_probs=35.4
Q ss_pred CHHHHHHHHHhhCCC--CCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccc
Q 010992 403 TKRSIQELVNQIDPS--ERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL 472 (496)
Q Consensus 403 tKrKLqELVrqIDPs--esLDpD-VEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I 472 (496)
.+..|.++.+.+|.+ ..|+.+ ..++|. ...+-+..+...++.+-..+...|+..+..-.|.+.++..|
T Consensus 121 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~~~ 191 (191)
T 3khe_A 121 SRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKICDVKV 191 (191)
T ss_dssp CHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHTCCC
T ss_pred hHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccCC
Confidence 345566666666543 345544 222222 11112222333333444456677899998888888776543
No 294
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=31.07 E-value=54 Score=29.59 Aligned_cols=53 Identities=15% Similarity=0.070 Sum_probs=35.3
Q ss_pred cCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 010992 397 FGNRILTKRSIQELVNQIDPSERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSD 453 (496)
Q Consensus 397 ~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLeIADDFVDsVvt~ACrLAKHRKSd 453 (496)
++..|-....|.+++.+++ ||.+ ++++|..+.++=+++.+....+.|+.+|-.
T Consensus 128 ~g~di~d~~~L~~~a~~~G----Ld~~~~~~~l~~~~s~~~~~~l~~~~~~a~~~Gv~ 181 (234)
T 3rpp_A 128 RNEDITEPQSILAAAEKAG----MSAEQAQGLLEKIATPKVKNQLKETTEAACRYGAF 181 (234)
T ss_dssp SCCCCSSHHHHHHHHHHTT----CCHHHHHHHHTTTTSHHHHHHHHHHHHHHHHTTCS
T ss_pred CCCCCCCHHHHHHHHHHcC----CCHHHHHHHHHHccCHHHHHHHHHHHHHHHHcCCC
Confidence 3456777888888888764 6754 555555555556667777777777766543
No 295
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=30.74 E-value=32 Score=34.79 Aligned_cols=73 Identities=14% Similarity=0.058 Sum_probs=51.0
Q ss_pred HHHHHHHHHhhCCCCCCCHHHH-HH---------HHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCcccc
Q 010992 404 KRSIQELVNQIDPSERLDPDVE-DI---------LVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLP 473 (496)
Q Consensus 404 KrKLqELVrqIDPsesLDpDVE-EL---------LLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IP 473 (496)
..-|++|++.+|-...||.|.. |+ -.+.+|+.|-.++.....+-+.-+.-.||+.||+-.|.. .++.+-
T Consensus 148 ~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~~~N~ll~~~vsgIt~~ir~pG~iNvD~~dv~t~L~~-~g~a~~ 226 (382)
T 2vxy_A 148 AGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVLRQGVQGISDLIATPGLINLDFADVKTIMSN-KGSALM 226 (382)
T ss_dssp HHHHHHHHHHCSEEEEEEHHHHHHHSCTTCCHHHHHHHHHHHHHHHHHHHHTTTSSCCTTCCCHHHHHHHTTC-SSEEEE
T ss_pred HHHHHHHHHhCCEEEEEccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCccccCHHHHHHhccC-CCceEE
Confidence 3447788888887666666642 11 244566666666665555666677778999999999987 688888
Q ss_pred CCCc
Q 010992 474 GFSG 477 (496)
Q Consensus 474 GFss 477 (496)
|++.
T Consensus 227 g~g~ 230 (382)
T 2vxy_A 227 GIGI 230 (382)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8764
No 296
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=30.56 E-value=1.1e+02 Score=23.31 Aligned_cols=36 Identities=17% Similarity=0.429 Sum_probs=21.7
Q ss_pred CcCCc-cCCHHHHHHHHHhhCC-CCCCCHHHHHHHHHH
Q 010992 396 EFGNR-ILTKRSIQELVNQIDP-SERLDPDVEDILVDI 431 (496)
Q Consensus 396 e~~nr-ILtKrKLqELVrqIDP-sesLDpDVEELLLeI 431 (496)
.++.. .|++..|..+++...+ +..-+.+|++++.++
T Consensus 22 ~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~ 59 (92)
T 2kax_A 22 REGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSL 59 (92)
T ss_dssp TSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHH
T ss_pred hCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHh
Confidence 34444 7899999999987433 112344566655544
No 297
>2a3q_A Hypothetical protein; MM.29898, BC004623, 2410015N17RIK, structural genomics, PROT structure initiative, PSI; 2.32A {Mus musculus} SCOP: a.204.1.2 PDB: 2q4p_A
Probab=30.47 E-value=1.1e+02 Score=27.52 Aligned_cols=22 Identities=9% Similarity=0.294 Sum_probs=14.3
Q ss_pred HHHHHHHHhhhhcCCCCcchhhHHH
Q 010992 438 SITMFGCSLAKHRKSDTLEAKDILV 462 (496)
Q Consensus 438 sVvt~ACrLAKHRKSdTLEvKDVQL 462 (496)
||+...+.||.+-+ |++.|+..
T Consensus 98 DVL~~lv~LA~~lg---IDleeAl~ 119 (170)
T 2a3q_A 98 DVLIYLVALAARCH---VDLPQAVI 119 (170)
T ss_dssp HHHHHHHHHHHHTT---CCHHHHHH
T ss_pred HHHHHHHHHHHHhC---CCHHHHHH
Confidence 45556667888775 56677643
No 298
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=30.40 E-value=42 Score=30.58 Aligned_cols=60 Identities=15% Similarity=0.155 Sum_probs=36.1
Q ss_pred cCCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHH---HHHHHHhhhhcCCCCcchhhHHHHH
Q 010992 401 ILTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFVESI---TMFGCSLAKHRKSDTLEAKDILVHL 464 (496)
Q Consensus 401 ILtKrKLqELVrqID--PsesLDpDVEELLLeIADDFVDsV---vt~ACrLAKHRKSdTLEvKDVQLhL 464 (496)
-++++.+.++++++- .+..+|+++.+.|.++++.-+..+ ++.++.++ .+.|+.+||.-.+
T Consensus 177 ~l~~~~~~~~l~~~~~~~~~~~~~~a~~~l~~~~~G~~r~~~~~l~~~~~~~----~~~i~~~~v~~~~ 241 (373)
T 1jr3_A 177 ALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG----DGQVSTQAVSAML 241 (373)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHSSSCHHHHHHHHHHHHHHT----TTCBCHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHhc----CCcccHHHHHHHh
Confidence 356777888777653 245789999888888766433333 33333322 2456777775443
No 299
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=30.20 E-value=1.4e+02 Score=24.36 Aligned_cols=27 Identities=7% Similarity=0.027 Sum_probs=17.7
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHH
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPD 423 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpD 423 (496)
+.+++..|++..|..+++.+. ..++++
T Consensus 60 D~d~~G~I~~~el~~~l~~~g--~~~~~~ 86 (150)
T 2jjz_A 60 DLNNEGEIDLMSLKRMMEKLG--VPKTHL 86 (150)
T ss_dssp CCCTTSSBCHHHHHHHHHHTT--CCCCHH
T ss_pred CCCCcCcCCHHHHHHHHHHcC--CCCCHH
Confidence 456666788888888887763 334444
No 300
>3bhw_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.50A {Magnetospirillum magneticum}
Probab=30.19 E-value=45 Score=30.67 Aligned_cols=75 Identities=15% Similarity=0.112 Sum_probs=41.5
Q ss_pred HHHHHHHHHhhCCCCCCCHHHHHHHHHH---------------HHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh-
Q 010992 404 KRSIQELVNQIDPSERLDPDVEDILVDI---------------AEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN- 467 (496)
Q Consensus 404 KrKLqELVrqIDPsesLDpDVEELLLeI---------------ADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn- 467 (496)
|+...++.+++ ..||+++.++|.+. .|.|+.+.+..-.+.....+...|+.+|+.-.|++.
T Consensus 57 kr~~~~i~~RL---~~L~~~~l~~l~~~~~~~~~~l~l~a~~~~~~Ll~dF~~eV~~~~~~~~~~~l~~~d~~~F~~~k~ 133 (209)
T 3bhw_A 57 KRQSSLMRNRL---ETMGPELWQMVRDGSTQVAIQAVFAAAIKHSTLLGDFLDLVVRDQFRMFRPDLPRKMWDQYLEQCR 133 (209)
T ss_dssp HHHHHHHHHHH---TTSCHHHHHHHHHSCHHHHHHHHHHHHHHHCHHHHHHHHHTHHHHTTSSSCBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HhCCHHHHHHHHcCCHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHH
Confidence 45566666777 55777766555321 123333333333344445677789999998888765
Q ss_pred -cCccccCCCccccc
Q 010992 468 -WNMTLPGFSGDEIK 481 (496)
Q Consensus 468 -WNI~IPGFssDEIr 481 (496)
|+-.+-.++..-++
T Consensus 134 ~~~~~v~~wSdsT~k 148 (209)
T 3bhw_A 134 NRDPLMPVWQDSTAN 148 (209)
T ss_dssp HHCTTC----CHHHH
T ss_pred hcCCcccccCHHHHH
Confidence 66666666655444
No 301
>2o2k_A Methionine synthase; C-shaped, twisted anti-parallel beta sheet, beta-meander region, transferase; 1.60A {Homo sapiens}
Probab=30.15 E-value=98 Score=31.34 Aligned_cols=68 Identities=15% Similarity=0.231 Sum_probs=41.5
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----CCCCcchhhHHHHHhhhcCccc-cCCCc
Q 010992 406 SIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHR-----KSDTLEAKDILVHLERNWNMTL-PGFSG 477 (496)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHR-----KSdTLEvKDVQLhLERnWNI~I-PGFss 477 (496)
.+.+++++. ....|+--.=+|--|||.++|.+++..+..-+.. +.+.++.+|+ +-|+.-||+. |||++
T Consensus 183 gide~~~~~--~~~~ddy~aiml~aLAdrlAEA~AE~lH~~VR~e~wGya~de~l~~~~l--~~e~Y~GiRpSPGYpa 256 (355)
T 2o2k_A 183 GVEELSKAY--EDDGDDYSSIMVKALGDRLAEAFAEELHERVRRELWAYCGSEQLDVADL--RRLRYKGIRPAPGYPS 256 (355)
T ss_dssp SHHHHHHHH--HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTCCCCHHHH--HTTCSSSBCCCTTSTT
T ss_pred hHHHHHHHH--HhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccCHHHH--HhccCCccCCCCCCCC
Confidence 467777766 1122333323335578888888887777665543 2345778876 3455557887 89985
No 302
>3fay_A P195, RAS GTPase-activating-like protein iqgap1; all alpha, calmodulin-binding, cell membrane, membrane, phosphoprotein, membrane protein; 2.20A {Homo sapiens}
Probab=29.94 E-value=29 Score=34.35 Aligned_cols=18 Identities=11% Similarity=0.204 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010992 426 DILVDIAEDFVESITMFG 443 (496)
Q Consensus 426 ELLLeIADDFVDsVvt~A 443 (496)
+.|.+++++|++.|+...
T Consensus 178 ~~L~~~~~~~~~~I~~s~ 195 (387)
T 3fay_A 178 RNMRAVTDKFLSAIVSSV 195 (387)
T ss_dssp HHHHHHHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 478899999999987654
No 303
>2kbz_A GP15, 15 protein (bacteriophage SPP1 complete nucleotide sequence); three alpha-helix bundle, viral protein; NMR {Bacillus phage SPP1}
Probab=29.64 E-value=31 Score=28.05 Aligned_cols=21 Identities=10% Similarity=0.116 Sum_probs=9.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHH
Q 010992 420 LDPDVEDILVDIAEDFVESIT 440 (496)
Q Consensus 420 LDpDVEELLLeIADDFVDsVv 440 (496)
-+++..+++++-|.++|.+-|
T Consensus 13 ~~D~lL~~~i~~a~~~v~~y~ 33 (99)
T 2kbz_A 13 KHDEYLTEMVPLLVEFAKDEC 33 (99)
T ss_dssp TTHHHHHHHHHHHHHHHHTTT
T ss_pred chhHHHHHHHHHHHHHHHHHh
Confidence 444444444444444444433
No 304
>1squ_A CHEX protein; alpha-beta sandwich, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.40A {Thermotoga maritima} SCOP: d.252.1.1 PDB: 1xko_A
Probab=29.19 E-value=1.2e+02 Score=25.15 Aligned_cols=43 Identities=9% Similarity=0.101 Sum_probs=32.4
Q ss_pred CccCCHHHHHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010992 399 NRILTKRSIQELVNQI---DPSERLDPDVEDILVDIAEDFVESITM 441 (496)
Q Consensus 399 nrILtKrKLqELVrqI---DPsesLDpDVEELLLeIADDFVDsVvt 441 (496)
--+++++...+|++.+ +....+|+++.++|.||++-.+..+++
T Consensus 57 ~l~~~~~~a~~i~~~mlgG~~~~e~~e~~~sal~Ei~Nii~g~~~~ 102 (155)
T 1squ_A 57 IYSFSSETALKVVSAMMGGMEYNQLDELALSAIGELGNMTAGKLAM 102 (155)
T ss_dssp EEEECHHHHHHHHHHHTTTCCCCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHHhCCCCccccCHHHHHHHHHHHHHHHHHHHH
Confidence 3344788888888776 233468999999999999877777666
No 305
>2ao9_A Phage protein; structural genomics, nine-fold NCS., PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.90A {Bacillus cereus} SCOP: a.4.1.17
Probab=29.10 E-value=1.2e+02 Score=27.23 Aligned_cols=44 Identities=16% Similarity=0.153 Sum_probs=28.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH----hhhhcCCCCcchhhHHHHHhhh
Q 010992 421 DPDVEDILVDIAEDFVESITMFGCS----LAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 421 DpDVEELLLeIADDFVDsVvt~ACr----LAKHRKSdTLEvKDVQLhLERn 467 (496)
.++..+.|-+|||.|++.++..... +.|+- .-+++=+.|.|++.
T Consensus 72 ~p~~~~~l~~vad~~le~~~~e~~~~~~~~~k~~---~p~~~A~i~~LKn~ 119 (155)
T 2ao9_A 72 NQDFIAFKSEVADSFLAEKREQVYSKLMQLILGP---QPSVKAMQLYMQRF 119 (155)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHSS---SCCHHHHHHHHHHT
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCcHHHHHHHHHc
Confidence 3455567788888888766543332 33333 34667788999885
No 306
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=29.09 E-value=1.4e+02 Score=25.91 Aligned_cols=42 Identities=12% Similarity=0.106 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhc
Q 010992 427 ILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 427 LLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (496)
+|..+.....+..+..+.++.-..+...|+..++.-.|+..+
T Consensus 127 ~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~ 168 (229)
T 3dd4_A 127 GLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIY 168 (229)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHH
T ss_pred HHHHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHH
Confidence 333333333445566777777677778899999988887754
No 307
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=28.90 E-value=1.4e+02 Score=22.78 Aligned_cols=71 Identities=8% Similarity=0.165 Sum_probs=42.5
Q ss_pred CCCcCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHH-----HHHHHHHH------------HHHHHHHhhhhcCCCCc
Q 010992 394 SDEFGNRILTKRSIQELVNQIDPSERLDPD-VEDILVD-----IAEDFVES------------ITMFGCSLAKHRKSDTL 455 (496)
Q Consensus 394 ~~e~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLe-----IADDFVDs------------Vvt~ACrLAKHRKSdTL 455 (496)
.+.+++..|++..|..+++.++. .+..+ +++++.. =-++|+.- .+..++++.-..++..|
T Consensus 16 ~D~d~~G~i~~~el~~~l~~~g~--~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I 93 (143)
T 3j04_B 16 IDQNRDGFIDKEDLHDMLASMGK--NPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFI 93 (143)
T ss_dssp TCSSCTTCCCHHHHHHHHHHTSC--CCCHHHHHTTTTTSSSCCCHHHHHHHHHHTTTSSCCHHHHHHHHTTSCSSSCCCC
T ss_pred hCCCCCCCcCHHHHHHHHHHhCC--CCCHHHHHHHHHhCCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHHCCCCCCeE
Confidence 35677788999999999998754 23332 3222211 01234332 34445555555667788
Q ss_pred chhhHHHHHhh
Q 010992 456 EAKDILVHLER 466 (496)
Q Consensus 456 EvKDVQLhLER 466 (496)
+..++...|.+
T Consensus 94 ~~~El~~~l~~ 104 (143)
T 3j04_B 94 HEDHLRELLTT 104 (143)
T ss_dssp CTTTHHHHHHT
T ss_pred cHHHHHHHHHH
Confidence 88888887774
No 308
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=28.82 E-value=1.4e+02 Score=26.28 Aligned_cols=64 Identities=16% Similarity=0.315 Sum_probs=40.0
Q ss_pred CHHHHHHHHHhhCCCCCCCHHHHHH----------------HHHHH-HHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 403 TKRSIQELVNQIDPSERLDPDVEDI----------------LVDIA-EDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 403 tKrKLqELVrqIDPsesLDpDVEEL----------------LLeIA-DDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
.|..++.|.++|.-. ++.|.-+ ..+|| .+|+|.+ .+|++ ++.+ .+||+-.+.|=
T Consensus 50 ~keA~ral~krl~~~---n~~vql~AL~LLd~~vkNcG~~Fh~evas~~Fl~el----~~l~~-~~~~-~~Vk~kil~li 120 (163)
T 1x5b_A 50 AKDCLKAIMKRVNHK---VPHVALQALTLLGACVANCGKIFHLEVCSRDFATEV----RAVIK-NKAH-PKVCEKLKSLM 120 (163)
T ss_dssp HHHHHHHHHHHHTCS---SHHHHHHHHHHHHHHHHHTCHHHHHHHTSHHHHHHH----HHHHH-TTCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHH----HHHHc-cCCC-HHHHHHHHHHH
Confidence 577777888887532 3444322 22333 4455544 35666 3444 47888888888
Q ss_pred hhcCccccCC
Q 010992 466 RNWNMTLPGF 475 (496)
Q Consensus 466 RnWNI~IPGF 475 (496)
..|...|.+.
T Consensus 121 ~~W~~~f~~~ 130 (163)
T 1x5b_A 121 VEWSEEFQKD 130 (163)
T ss_dssp HHHHHHTTTC
T ss_pred HHHHHHhcCC
Confidence 9999988764
No 309
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=28.82 E-value=64 Score=25.41 Aligned_cols=16 Identities=0% Similarity=0.092 Sum_probs=9.1
Q ss_pred CCCcchhhHHHHHhhh
Q 010992 452 SDTLEAKDILVHLERN 467 (496)
Q Consensus 452 SdTLEvKDVQLhLERn 467 (496)
...|+..+..-.|.+.
T Consensus 136 dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_B 136 GGKFDYVKFTAMIKGS 151 (156)
T ss_dssp TTEECHHHHHHHHHTS
T ss_pred CCEEeHHHHHHHHhcC
Confidence 4456666665555543
No 310
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=28.77 E-value=43 Score=32.56 Aligned_cols=28 Identities=0% Similarity=-0.085 Sum_probs=18.4
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 439 ITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 439 Vvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
.+..+.++.-..+...|++.++.-.|..
T Consensus 427 ~~~~~F~~~D~d~~G~Is~~El~~~l~~ 454 (494)
T 3lij_A 427 KLESAFQKFDQDGNGKISVDELASVFGL 454 (494)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHC-C
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 4556666666667777888888766654
No 311
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=28.73 E-value=1.1e+02 Score=25.73 Aligned_cols=15 Identities=0% Similarity=0.153 Sum_probs=8.7
Q ss_pred cCCCCcchhhHHHHH
Q 010992 450 RKSDTLEAKDILVHL 464 (496)
Q Consensus 450 RKSdTLEvKDVQLhL 464 (496)
.+...|+..+..-.|
T Consensus 175 d~dG~Is~~EF~~~~ 189 (191)
T 3k21_A 175 NNDGKIDFHEFSEMM 189 (191)
T ss_dssp SSSSSBCHHHHHHHH
T ss_pred CCCCeECHHHHHHHH
Confidence 455567777665444
No 312
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=28.71 E-value=93 Score=22.71 Aligned_cols=63 Identities=6% Similarity=0.088 Sum_probs=37.4
Q ss_pred HHHHHHHHHhhC-CC--C-CCCHH-HHHHHHH-----HHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 404 KRSIQELVNQID-PS--E-RLDPD-VEDILVD-----IAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 404 KrKLqELVrqID-Ps--e-sLDpD-VEELLLe-----IADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+.+|.++.+.+| .+ . .|+.+ +..+|.. +-..+-+..+...++.+-..+...|+..+..-.+.+
T Consensus 8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 80 (93)
T 1k2h_A 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 456778888877 33 3 67755 5566654 332333444455555555566777888887555544
No 313
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=28.69 E-value=1.5e+02 Score=24.02 Aligned_cols=27 Identities=7% Similarity=0.118 Sum_probs=15.7
Q ss_pred HHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 441 MFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 441 t~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
..+.+..-..+...|+..++.-.|...
T Consensus 102 ~~~f~~~D~d~~G~i~~~ef~~~~~~~ 128 (190)
T 1fpw_A 102 SWAFELYDLNHDGYITFDEMLTIVASV 128 (190)
T ss_dssp HHHHHHHCSSCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 344444444555667777776666654
No 314
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=28.68 E-value=1.4e+02 Score=23.34 Aligned_cols=46 Identities=30% Similarity=0.464 Sum_probs=26.7
Q ss_pred cCCc-cCCHHHHHHHHHhhCC---CCCCCHH-HHHHHHHH---------HHHHHHHHHHH
Q 010992 397 FGNR-ILTKRSIQELVNQIDP---SERLDPD-VEDILVDI---------AEDFVESITMF 442 (496)
Q Consensus 397 ~~nr-ILtKrKLqELVrqIDP---sesLDpD-VEELLLeI---------ADDFVDsVvt~ 442 (496)
+++. .|++..|.++++..-+ +..++++ |+++|.++ -+|||.-+...
T Consensus 23 dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 23 EGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp SSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred CCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 4443 8899999999986321 2345544 55555443 24677655443
No 315
>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}
Probab=28.60 E-value=1e+02 Score=25.52 Aligned_cols=40 Identities=23% Similarity=0.126 Sum_probs=26.4
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010992 406 SIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAK 448 (496)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAK 448 (496)
.+.++++.. .+. |..+.++|.+++++.++.+-.+.-.|.+
T Consensus 120 ~~~~~~~~a--~~~-D~~t~~~l~~~~~ee~~h~~~l~~~l~~ 159 (170)
T 2vzb_A 120 RYQEIANFT--NGK-DYTTCDIAKHILAEEEEHEQDLQDYLTD 159 (170)
T ss_dssp HHHHHHHHH--TTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH--Hcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555444 234 8888888888888887777666555544
No 316
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=28.46 E-value=16 Score=35.18 Aligned_cols=74 Identities=9% Similarity=0.128 Sum_probs=51.3
Q ss_pred CCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHH----HHhhhhc--CCCCcchhhHHHHHhhhcCccccC
Q 010992 402 LTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFG----CSLAKHR--KSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 402 LtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvt~A----CrLAKHR--KSdTLEvKDVQLhLERnWNI~IPG 474 (496)
|.-++...+++.|. .-.++|++-.+...+=+++|++.+-... -.|++.+ +...|...|.--||.|.||+.+-|
T Consensus 141 ldp~n~~~~a~~I~~~L~~~DP~~a~~Y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yfa~~yGl~~~~ 220 (313)
T 1toa_A 141 FDVKLWSYSVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKG 220 (313)
T ss_dssp GSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCEEEEEESCCHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccCCEEEEECCcHHHHHHHCCCeEEE
Confidence 56666667777663 3346777777777777777877665433 2455433 566788899999999999998754
Q ss_pred C
Q 010992 475 F 475 (496)
Q Consensus 475 F 475 (496)
+
T Consensus 221 ~ 221 (313)
T 1toa_A 221 L 221 (313)
T ss_dssp E
T ss_pred e
Confidence 3
No 317
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=28.42 E-value=85 Score=24.94 Aligned_cols=74 Identities=9% Similarity=0.141 Sum_probs=44.2
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCH-HHHHHHHHH-----HHHHHHH------------HHHHHHHhhhhcCCCCcc
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDP-DVEDILVDI-----AEDFVES------------ITMFGCSLAKHRKSDTLE 456 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDp-DVEELLLeI-----ADDFVDs------------Vvt~ACrLAKHRKSdTLE 456 (496)
+.+++..|++..|..+++.++.. .++. ++++++.++ .++|+.- .+..++++.-..+...|+
T Consensus 35 D~d~~G~i~~~el~~~l~~~g~~-~~~~~~~~~l~~~~dg~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~ 113 (166)
T 2mys_B 35 DQNADGIIDKDDLRETFAAMGRL-NVKNEELDAMIKEASGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIK 113 (166)
T ss_pred CCCCCCcCCHHHHHHHHHHhCCC-CCCHHHHHHHHHHCCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCccee
Confidence 45677788888888888887431 2333 344433321 1244432 344455555556677888
Q ss_pred hhhHHHHHhhhcCc
Q 010992 457 AKDILVHLERNWNM 470 (496)
Q Consensus 457 vKDVQLhLERnWNI 470 (496)
..++.-+|.. +|.
T Consensus 114 ~~el~~~l~~-~g~ 126 (166)
T 2mys_B 114 KSFLEELLTT-GGG 126 (166)
T ss_pred HHHHHHHHHH-cCC
Confidence 8888887764 343
No 318
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=28.42 E-value=1.1e+02 Score=25.49 Aligned_cols=34 Identities=9% Similarity=0.128 Sum_probs=23.3
Q ss_pred HHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCcc
Q 010992 438 SITMFGCSLAKHRKSDTLEAKDILVHLERNWNMT 471 (496)
Q Consensus 438 sVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~ 471 (496)
..+..++++.-..+...|+..++.-.|...+|..
T Consensus 114 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ 147 (202)
T 2bec_A 114 NKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQ 147 (202)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSC
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCC
Confidence 4455666666666777888888888887654543
No 319
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=28.34 E-value=83 Score=25.00 Aligned_cols=19 Identities=11% Similarity=0.167 Sum_probs=11.6
Q ss_pred hcCCCCcchhhHHHHHhhh
Q 010992 449 HRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 449 HRKSdTLEvKDVQLhLERn 467 (496)
..+...|+..+..-.|.+.
T Consensus 142 ~d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 142 PDVAGNVDYKNICYVITHG 160 (166)
T ss_pred CCCCCeEeHHHHHHHHHhc
Confidence 3455567777776666554
No 320
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=28.32 E-value=1e+02 Score=24.05 Aligned_cols=26 Identities=4% Similarity=0.063 Sum_probs=14.6
Q ss_pred HHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 441 MFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 441 t~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
..+.++.-..+...|+..++.-.|+.
T Consensus 98 ~~~F~~~D~d~~G~i~~~El~~~l~~ 123 (161)
T 1dtl_A 98 SDLFRMFDKNADGYIDLEELKIMLQA 123 (161)
T ss_dssp HHHHHHHCTTCSSEEEHHHHGGGGTT
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 34444444455556777777665543
No 321
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=28.22 E-value=68 Score=26.68 Aligned_cols=34 Identities=15% Similarity=0.108 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 434 DFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 434 DFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+-|+.++...++.+-..+...|+..+..-.|.+.
T Consensus 151 ~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~ 184 (202)
T 2bec_A 151 EQLENIADRTVQEADEDGDGAVSFVEFTKSLEKM 184 (202)
T ss_dssp HHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTS
T ss_pred HHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHh
Confidence 3344444444444555567778998887766654
No 322
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=28.19 E-value=47 Score=24.38 Aligned_cols=34 Identities=9% Similarity=0.302 Sum_probs=19.8
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHH
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPD-VEDILVD 430 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLe 430 (496)
+.+++..|++..|..+++.+. ..++++ +++++..
T Consensus 30 D~d~~G~i~~~el~~~l~~~g--~~~~~~~~~~l~~~ 64 (90)
T 1avs_A 30 DADGGGDISTKELGTVMRMLG--QNPTKEELDAIIEE 64 (90)
T ss_dssp CTTCSSEECHHHHHHHHHHTT--CCCCHHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHhC--CCCCHHHHHHHHHH
Confidence 345666778888888877763 234443 4444433
No 323
>3b0c_T CENP-T, centromere protein T; histone fold, DNA binding, DNA binding protein; HET: CIT; 2.20A {Gallus gallus} PDB: 3b0d_T* 3vh5_T 3vh6_T
Probab=28.16 E-value=99 Score=26.21 Aligned_cols=25 Identities=20% Similarity=0.235 Sum_probs=17.0
Q ss_pred HHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 443 GCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 443 ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
.+.+|-.|........++..+++|+
T Consensus 64 DV~lalrr~g~~~~~~~l~~l~~~~ 88 (111)
T 3b0c_T 64 DVELLMRRQGLVTDKMPLHVLVERH 88 (111)
T ss_dssp HHHHHHHHTTSSBTTBCHHHHHHHH
T ss_pred HHHHHHHHCCCccccccHHHHHHHh
Confidence 3567777777766777766666665
No 324
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=28.12 E-value=1.5e+02 Score=23.90 Aligned_cols=33 Identities=9% Similarity=0.153 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhc
Q 010992 436 VESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 436 VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (496)
.+..+..+.++.-..+...|+..++.-.|...+
T Consensus 90 ~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~ 122 (183)
T 1s6c_A 90 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIY 122 (183)
T ss_dssp HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHH
Confidence 345566777777777888899999988887653
No 325
>3jvo_A GP6; 13-membered ring, viral protein; HET: MSE; 2.10A {Enterobacteria phage HK97}
Probab=28.11 E-value=74 Score=26.63 Aligned_cols=41 Identities=5% Similarity=0.057 Sum_probs=31.7
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010992 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMF 442 (496)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ 442 (496)
-.+|+-..++..+| ||.. -|++..+.|++-|.++|++.+..
T Consensus 6 ~~~vtLee~K~~LR-id~d--~dD~li~~li~AA~~~~~~~~~~ 46 (108)
T 3jvo_A 6 LDVISLSLFKQQIE-FEED--DRDELITLYAQAAFDYCMRWCDE 46 (108)
T ss_dssp GGTSCHHHHHHHTT-CCCS--TTHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccCCHHHHHHHcc-CCCC--ccHHHHHHHHHHHHHHHHHHhCC
Confidence 34677666777776 6765 48889999999999999988763
No 326
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=28.08 E-value=22 Score=33.07 Aligned_cols=17 Identities=18% Similarity=0.073 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHhhhhcC
Q 010992 435 FVESITMFGCSLAKHRK 451 (496)
Q Consensus 435 FVDsVvt~ACrLAKHRK 451 (496)
.+..++...+++|+..+
T Consensus 216 l~~~~~~E~~~va~a~G 232 (312)
T 3hn2_A 216 LVRGIMLEVIAGANAQG 232 (312)
T ss_dssp HHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 33344444445555544
No 327
>2z15_A Protein TOB1; human TOB1 protein, phosphorylation, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.30A {Homo sapiens} SCOP: d.370.1.1 PDB: 2d5r_B
Probab=28.07 E-value=10 Score=33.45 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccc-cCCC
Q 010992 436 VESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL-PGFS 476 (496)
Q Consensus 436 VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I-PGFs 476 (496)
+|-++..||+.+- |+..|+.-.|-++|-||| ||--
T Consensus 71 ~Dp~i~~Aa~~sG------l~~~dl~~~LP~eltlWvDPgeV 106 (130)
T 2z15_A 71 VDPVIEQASKESG------LDIDDVRGNLPQDLSVWIDPFEV 106 (130)
T ss_dssp BCHHHHHHHHTTT------CCHHHHHHHSCTTEEEEEETTEE
T ss_pred CCHHHHHHHHHhC------CCHHHHHHhCCccCEEEECCCEE
Confidence 4557777777443 788999888999999999 7643
No 328
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=27.94 E-value=43 Score=27.76 Aligned_cols=34 Identities=12% Similarity=0.300 Sum_probs=21.1
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHH
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVD 430 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLe 430 (496)
+.+++..|++..|..+++.++ +.|+++-.+.|++
T Consensus 95 D~d~~G~I~~~el~~~l~~~g--~~ls~~ei~~~~~ 128 (153)
T 3i5g_B 95 DEDGQGFIPEDYLKDLLENMG--DNFSKEEIKNVWK 128 (153)
T ss_dssp CSSCSSCCCHHHHHHHHHSSS--SCCCHHHHHHHHT
T ss_pred ccCCCCeEeHHHHHHHHHHcC--CcCCHHHHHHHHH
Confidence 456777788888888887763 4565553333333
No 329
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=27.83 E-value=55 Score=23.15 Aligned_cols=63 Identities=6% Similarity=0.128 Sum_probs=40.0
Q ss_pred HHHHHHHHHhhCCC--CCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 404 KRSIQELVNQIDPS--ERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 404 KrKLqELVrqIDPs--esLDpD-VEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+.+|.++.+.+|.+ ..|+.+ ...+|..+. .+-+.-+...++.+-..+...|+..+..-.+.+.
T Consensus 2 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp -CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred hHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 35688888888764 456644 666666655 4444445555555555566678888887666654
No 330
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=27.74 E-value=46 Score=25.51 Aligned_cols=24 Identities=4% Similarity=0.052 Sum_probs=14.5
Q ss_pred HhhhhcCCCCcchhhHHHHHhhhc
Q 010992 445 SLAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 445 rLAKHRKSdTLEvKDVQLhLERnW 468 (496)
+.+-..+...|+..+..-.|.+.+
T Consensus 119 ~~~d~~~dg~i~~~eF~~~~~~~~ 142 (145)
T 2bl0_B 119 KEVSVSGDGAINYESFVDMLVTGY 142 (145)
T ss_dssp TTCCCCTTSEEEHHHHHHHHHHSS
T ss_pred HHcCCCCCCcEeHHHHHHHHHhcC
Confidence 333344556688888766666543
No 331
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=27.72 E-value=2.1e+02 Score=23.18 Aligned_cols=30 Identities=3% Similarity=0.042 Sum_probs=19.4
Q ss_pred HHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 437 ESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 437 DsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+..+..+.++.-..+...|+..++.-.|+.
T Consensus 108 ~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~ 137 (191)
T 2ccm_A 108 TKYMNFMFDVNDTSGDNIIDKHEYSTVYMS 137 (191)
T ss_dssp HHHHHHHHHHHCTTCSSBCCHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 344555566665666777888888776643
No 332
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=27.71 E-value=78 Score=26.85 Aligned_cols=23 Identities=4% Similarity=0.036 Sum_probs=10.0
Q ss_pred HHHhhhhcCCCCcchhhHHHHHh
Q 010992 443 GCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 443 ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
.++.+-..+...|+..++.-.|.
T Consensus 140 ~f~~~D~d~dG~I~~~Ef~~~~~ 162 (211)
T 2ggz_A 140 VFHKIDINNDGELTLEEFINGMA 162 (211)
T ss_dssp HHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHhCCCCCCCCcHHHHHHHHH
Confidence 33333333444455555544433
No 333
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=27.70 E-value=40 Score=23.63 Aligned_cols=21 Identities=10% Similarity=0.098 Sum_probs=12.1
Q ss_pred hhhcCCCCcchhhHHHHHhhh
Q 010992 447 AKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 447 AKHRKSdTLEvKDVQLhLERn 467 (496)
+-..+...|+..+..-.+.+.
T Consensus 52 ~d~~~~g~i~~~eF~~~~~~~ 72 (77)
T 2joj_A 52 YDREGNGYIGFDDFLDIMTEK 72 (77)
T ss_dssp HCCSSSSEEEHHHHHHHHTHH
T ss_pred HCCCCCCcCcHHHHHHHHHHH
Confidence 333455567777776555543
No 334
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=27.57 E-value=99 Score=31.26 Aligned_cols=40 Identities=20% Similarity=0.439 Sum_probs=25.9
Q ss_pred HHHHHHHHHhhCCCCCCCH--------HHHHHHH------HHHHHHHHHHHHHH
Q 010992 404 KRSIQELVNQIDPSERLDP--------DVEDILV------DIAEDFVESITMFG 443 (496)
Q Consensus 404 KrKLqELVrqIDPsesLDp--------DVEELLL------eIADDFVDsVvt~A 443 (496)
+++|...++.+-...+||+ |++++|+ +++++||++|-+.+
T Consensus 6 ~~~l~~~~~~l~~~~~~~e~~~~~~l~e~~~~Ll~adv~~~~~~~~~~~v~~~~ 59 (425)
T 2ffh_A 6 SARLQEAIGRLRGRGRITEEDLKATLREIRRALMDADVNLEVTRDFVERVREEA 59 (425)
T ss_dssp HHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 3567777777777777775 3445554 46777777776544
No 335
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=27.55 E-value=1.1e+02 Score=23.79 Aligned_cols=20 Identities=20% Similarity=0.288 Sum_probs=12.2
Q ss_pred CCcCCccCCHHHHHHHHHhh
Q 010992 395 DEFGNRILTKRSIQELVNQI 414 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI 414 (496)
+.+++..|++..|..+++.+
T Consensus 94 D~d~~G~I~~~el~~~l~~~ 113 (146)
T 2qac_A 94 DNNCTGYLTKSQMKNILTTW 113 (146)
T ss_dssp CTTCSSEEEHHHHHHHHHHS
T ss_pred CCCCCCCCCHHHHHHHHHHh
Confidence 34455566666666666665
No 336
>3rh2_A Hypothetical TETR-like transcriptional regulator; DNA/RNA-binding 3-helical bundle, structural genomics, joint for structural genomics; 2.42A {Shewanella amazonensis}
Probab=27.29 E-value=24 Score=29.19 Aligned_cols=33 Identities=12% Similarity=0.037 Sum_probs=21.7
Q ss_pred hcCCCCcchhhHHHHHhhhcCccccCCCccccc
Q 010992 449 HRKSDTLEAKDILVHLERNWNMTLPGFSGDEIK 481 (496)
Q Consensus 449 HRKSdTLEvKDVQLhLERnWNI~IPGFssDEIr 481 (496)
.++...++.+++.-.++.-|++-.|++..+..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 198 (212)
T 3rh2_A 166 QSSIATISKASLYEGLLRVLMIFKAYSTPDSLA 198 (212)
T ss_dssp HSSCCCCCHHHHHHHHHHHHHHHHTTBCHHHHH
T ss_pred hCCcccccHHHHHHHHHHHHHHHccccCHHHHH
Confidence 345556677777777777777766766655433
No 337
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=27.23 E-value=99 Score=29.90 Aligned_cols=46 Identities=4% Similarity=0.161 Sum_probs=31.4
Q ss_pred CCCCHHHHHHHHHHH----HHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 418 ERLDPDVEDILVDIA----EDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 418 esLDpDVEELLLeIA----DDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
..|++++.++|+... =.=+++|++++|.+|+ .+.|+..|+...+++
T Consensus 337 ~~~~~~a~~~l~~~~wpGNvreL~~~i~~~~~~~~---~~~i~~~~l~~~~~~ 386 (387)
T 1ny5_A 337 EGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSE---GKFIDRGELSCLVNS 386 (387)
T ss_dssp CEECHHHHHHHHHSCCTTHHHHHHHHHHHHHHHCC---SSEECHHHHHHHC--
T ss_pred CCCCHHHHHHHHhCCCCcHHHHHHHHHHHHHHhCC---CCcCcHHHCcHhhhc
Confidence 358999999888432 0125788999998885 357888888665543
No 338
>3uv1_A DER F 7 allergen; super-roll; 2.00A {Dermatophagoides farinae}
Probab=27.20 E-value=8.6 Score=34.25 Aligned_cols=54 Identities=17% Similarity=0.185 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh------------cCccccCCCc
Q 010992 421 DPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN------------WNMTLPGFSG 477 (496)
Q Consensus 421 DpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn------------WNI~IPGFss 477 (496)
|+...|-+-+-+++|||.|+....+ -.+-|.+.+.|+...+++. +|.+|-|+++
T Consensus 1 ~~~~~d~~~~~~N~~vD~~l~~~~~---~~~lDP~~lpd~~~~f~~~~g~~~~~g~~~l~ng~l~GLSs 66 (196)
T 3uv1_A 1 DPIHYDKITEEINKAIDDAIAAIEQ---SETIDPMKVPDHADKFERHVGILDFKGELAMRNIEARGLKQ 66 (196)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHT---SSSSSSEEECCEEEEEEEECSSSEEEEEEEEEEEEEECGGG
T ss_pred CcccchhHHHHHHHHHHHHHHHHHh---hcCCCCeecCccccccccccceEeeEEEEEEEEEEEEcccc
Confidence 5666778888999999999986543 3467788888887666653 3566777663
No 339
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=27.10 E-value=2.2e+02 Score=23.58 Aligned_cols=70 Identities=10% Similarity=0.167 Sum_probs=38.6
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH----------HHHHHH-----HHHHHHHhhhhcCCCCcchhh
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIA----------EDFVES-----ITMFGCSLAKHRKSDTLEAKD 459 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIA----------DDFVDs-----Vvt~ACrLAKHRKSdTLEvKD 459 (496)
+.+++..|++..|..+++.+ +..++++..+.|.+.+ +||+.- .+..+.++.-..+...|+.++
T Consensus 37 D~d~~G~I~~~El~~~l~~~--~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~F~~~D~d~~G~i~~~e 114 (191)
T 1y1x_A 37 DTDGSGAISVPELNAALSSA--GVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNE 114 (191)
T ss_dssp CTTCSSSBCHHHHHHHHCBT--TBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTTSSSCBCHHH
T ss_pred cCCCCCcCcHHHHHHHHHHc--CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHH
Confidence 34556667766666666322 1233333333333322 345432 345556666566777899999
Q ss_pred HHHHHhh
Q 010992 460 ILVHLER 466 (496)
Q Consensus 460 VQLhLER 466 (496)
+.-.|..
T Consensus 115 ~~~~l~~ 121 (191)
T 1y1x_A 115 VRAALLS 121 (191)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9888865
No 340
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=27.00 E-value=1.1e+02 Score=23.61 Aligned_cols=42 Identities=24% Similarity=0.400 Sum_probs=23.4
Q ss_pred ccCCHHHHHHHHHhhCC---CCCCC-HHHHHHHHHH---------HHHHHHHHHH
Q 010992 400 RILTKRSIQELVNQIDP---SERLD-PDVEDILVDI---------AEDFVESITM 441 (496)
Q Consensus 400 rILtKrKLqELVrqIDP---sesLD-pDVEELLLeI---------ADDFVDsVvt 441 (496)
..|++..|.++++...+ +..++ .+|+++|.++ -+||+.-+..
T Consensus 26 G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (95)
T 1j55_A 26 QTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (95)
T ss_dssp TEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 47899999998886432 12333 3456655554 2467665543
No 341
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=26.98 E-value=20 Score=30.67 Aligned_cols=30 Identities=3% Similarity=0.121 Sum_probs=22.7
Q ss_pred cCCCCcchhhHHHHHhhhcCccccCCCcccc
Q 010992 450 RKSDTLEAKDILVHLERNWNMTLPGFSGDEI 480 (496)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPGFssDEI 480 (496)
-+.+.|++-||...||++||+.||-- .+.+
T Consensus 44 LglDSLd~VeLVm~lE~~fGi~ipd~-~e~~ 73 (102)
T 2l9f_A 44 LHMSSITVGQLVNEAARAMGLSAVAM-PTNF 73 (102)
T ss_dssp SCCCHHHHHHHHHHHHHHHTCSTTSS-CSCC
T ss_pred cCCcHHHHHHHHHHHHHHhCCCCCcc-HHHH
Confidence 36677888888888888888888765 5555
No 342
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=26.81 E-value=41 Score=27.02 Aligned_cols=47 Identities=15% Similarity=0.115 Sum_probs=31.6
Q ss_pred CCHHHHHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010992 402 LTKRSIQELVNQI-DPSERLDPDVEDILVDIAEDFVESITMFGCSLAK 448 (496)
Q Consensus 402 LtKrKLqELVrqI-DPsesLDpDVEELLLeIADDFVDsVvt~ACrLAK 448 (496)
++...+..|++=| .....++++...-|+.+||.|--.-+...|.-.-
T Consensus 72 ~~~~~~~~~l~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l 119 (145)
T 4eoz_A 72 VEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDAL 119 (145)
T ss_dssp SCHHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHCC-
T ss_pred CCHHHHHHHHHhhccCccCCcHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 5677777787766 2344566666667889999987666666665443
No 343
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=26.80 E-value=18 Score=34.39 Aligned_cols=74 Identities=7% Similarity=0.044 Sum_probs=50.4
Q ss_pred cCCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHH----HhhhhcC--CCCcchhhHHHHHhhhcCcccc
Q 010992 401 ILTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFGC----SLAKHRK--SDTLEAKDILVHLERNWNMTLP 473 (496)
Q Consensus 401 ILtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvt~AC----rLAKHRK--SdTLEvKDVQLhLERnWNI~IP 473 (496)
-|.-.....+++.|. .-.++|++-.+...+=+++|+..+-...- +|++..+ ...|...|.--||.|.||+.+-
T Consensus 126 Wldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yf~~~yGl~~~ 205 (294)
T 3hh8_A 126 WLNLENGIIYSKNIAKQLIAKDPKNKETYEKNLKAYVAKLEKLDKEAKSKFDAIAENKKLIVTSEGCFKYFSKAYGVPSA 205 (294)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCGGGCCEEEEESCCHHHHHHHTCCEE
T ss_pred eCCHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccCcEEEEECChHHHHHHHcCCcee
Confidence 356666666666663 23467777777777777888777655433 3454443 5567778998899999999865
Q ss_pred C
Q 010992 474 G 474 (496)
Q Consensus 474 G 474 (496)
|
T Consensus 206 ~ 206 (294)
T 3hh8_A 206 Y 206 (294)
T ss_dssp E
T ss_pred e
Confidence 4
No 344
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=26.69 E-value=85 Score=31.79 Aligned_cols=76 Identities=11% Similarity=0.151 Sum_probs=46.9
Q ss_pred HHHHHHHHHhhCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCc--cccC--CCc
Q 010992 404 KRSIQELVNQIDPSE--RLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNM--TLPG--FSG 477 (496)
Q Consensus 404 KrKLqELVrqIDPse--sLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI--~IPG--Fss 477 (496)
-+++++|.+.+.... ..|..+-|+..=+.+-|+.--+.+++.++..=..--|++++|.-.+...|++ --|| ||+
T Consensus 188 ~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~ri~~l~pG~G~GG 267 (431)
T 3ojo_A 188 IEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPRVNIHQPGPGVGG 267 (431)
T ss_dssp HHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCCCCCCSCCCC
T ss_pred HHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHccCCCcccCCCCCCccc
Confidence 356777777775432 3466777887777788887777666655554433445667766666666554 3365 555
Q ss_pred cc
Q 010992 478 DE 479 (496)
Q Consensus 478 DE 479 (496)
-=
T Consensus 268 ~C 269 (431)
T 3ojo_A 268 HC 269 (431)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 345
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=26.69 E-value=29 Score=34.07 Aligned_cols=60 Identities=12% Similarity=0.109 Sum_probs=33.6
Q ss_pred HHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcC
Q 010992 404 KRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWN 469 (496)
Q Consensus 404 KrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWN 469 (496)
-+.|.+|+++|+--.+|.+- .|-+|-|+.+++.++..+.+.+-..++.+||.-.|++-|.
T Consensus 292 ~~~i~~l~~~lglP~~L~e~------Gi~~~~i~~~a~~a~~~~~~~np~~~t~~di~~il~~a~~ 351 (364)
T 3iv7_A 292 LEGLQRLRLSVNAPKRLSDY------GFEASGIAEAVDVTLEKVPANNPRPVTRENLSRLLEAALN 351 (364)
T ss_dssp HHHHHHHHHHTTCCCCGGGG------TCCGGGHHHHHHHHHTTSCTTCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcHHHc------CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHhc
Confidence 45677888887654443321 0111223333333432233445556889999999999884
No 346
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=26.59 E-value=84 Score=27.10 Aligned_cols=45 Identities=27% Similarity=0.346 Sum_probs=36.7
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 010992 406 SIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHR 450 (496)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHR 450 (496)
.|+.|+.+-++..-++.|+.+++.+=-++|.+.|-....+.|+.|
T Consensus 109 ~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~ 153 (155)
T 1wzv_A 109 ALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVDR 153 (155)
T ss_dssp HHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEEC
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 355666665777889999999999888899999999888888765
No 347
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=26.36 E-value=73 Score=23.91 Aligned_cols=43 Identities=14% Similarity=0.110 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 423 DVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 423 DVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
++++.|.+...+..+.+ ..++++.-..+...|+..|+...|++
T Consensus 10 ~~~~~l~~~~~~~~~~l-~~~F~~~D~d~~G~i~~~el~~~l~~ 52 (105)
T 1wlz_A 10 DILARLHKAVTSHYHAI-TQEFENFDTMKTNTISREEFRAICNR 52 (105)
T ss_dssp HHHHHHHHHHHHTHHHH-HHHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHchHHHH-HHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 34444444443333322 23333333334445666666555544
No 348
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=26.35 E-value=1.1e+02 Score=21.97 Aligned_cols=17 Identities=29% Similarity=0.702 Sum_probs=12.5
Q ss_pred cCCc-cCCHHHHHHHHHh
Q 010992 397 FGNR-ILTKRSIQELVNQ 413 (496)
Q Consensus 397 ~~nr-ILtKrKLqELVrq 413 (496)
+++. .|++..|..+++.
T Consensus 23 d~~G~~i~~~el~~~l~~ 40 (90)
T 1k8u_A 23 EGDKHTLSKKELKELIQK 40 (90)
T ss_dssp SSCTTEEEHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHH
Confidence 4445 7888888888885
No 349
>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1
Probab=26.29 E-value=7.7 Score=31.68 Aligned_cols=24 Identities=13% Similarity=0.433 Sum_probs=18.8
Q ss_pred CCCCcchhhHHHHHhhhcCccccC
Q 010992 451 KSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 451 KSdTLEvKDVQLhLERnWNI~IPG 474 (496)
+-+.|.+-+|...||++||+.||-
T Consensus 47 GlDSL~~veL~~~LE~~fgi~i~~ 70 (100)
T 1vku_A 47 GFDSIDVIDLVMFFEDEFALRIED 70 (100)
T ss_dssp TCCHHHHHHHHHHHHHHHTCCCCH
T ss_pred CCchHHHHHHHHHHHHHHCCCCCH
Confidence 556677778888888888888864
No 350
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=26.18 E-value=93 Score=25.03 Aligned_cols=23 Identities=13% Similarity=0.286 Sum_probs=15.9
Q ss_pred hhhhcCCCCcchhhHHHHHhhhc
Q 010992 446 LAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 446 LAKHRKSdTLEvKDVQLhLERnW 468 (496)
.+-..+...|+..+..-.+.+.|
T Consensus 153 ~~D~d~dG~i~~~eF~~~~~~~~ 175 (191)
T 1uhk_A 153 VCDIDESGQLDVDEMTRQHLGFW 175 (191)
T ss_dssp HSCCCTTSCEEHHHHHHHHHHHH
T ss_pred HhCCCCCCcCcHHHHHHHHHHHh
Confidence 33344566788888877777766
No 351
>2ck3_A ATP synthase subunit alpha\, mitochondrial; hydrolase; HET: ANP ADP; 1.9A {Bos taurus} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1bmf_A* 1e1q_A* 1e1r_A* 1e79_A* 1h8h_A* 1nbm_A* 1ohh_A* 1qo1_A 1w0j_A* 1w0k_A* 1h8e_A* 2jdi_A* 2wss_A* 2w6j_A 2w6e_A 2w6g_A 2w6f_A 2w6h_A 2w6i_A 1cow_A* ...
Probab=26.13 E-value=38 Score=35.63 Aligned_cols=31 Identities=19% Similarity=0.451 Sum_probs=26.1
Q ss_pred HHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH
Q 010992 408 QELVNQIDPSERLDPDVEDILVDIAEDFVES 438 (496)
Q Consensus 408 qELVrqIDPsesLDpDVEELLLeIADDFVDs 438 (496)
.+++++|+.+..||+|.++.|.+++++|.+.
T Consensus 477 ~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~ 507 (510)
T 2ck3_A 477 QALLGKIRTDGKISEESDAKLKEIVTNFLAG 507 (510)
T ss_dssp HHHHHHHHHSSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 3667777778899999999999999999764
No 352
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=26.02 E-value=49 Score=33.58 Aligned_cols=72 Identities=14% Similarity=0.144 Sum_probs=50.6
Q ss_pred HHHHHHHHhhCCCCCCCHHHH-HH---------HHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccC
Q 010992 405 RSIQELVNQIDPSERLDPDVE-DI---------LVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 405 rKLqELVrqIDPsesLDpDVE-EL---------LLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
.-|++|.+.+|-...||.|.. |+ -.+.+|+.|-.++.....+-+.-+.-.||+.||+-.|.. .++.+-|
T Consensus 149 ~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~~~N~li~~~v~~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g 227 (394)
T 2vaw_A 149 EGIRALAESVDSLITIPNEKLLTILGKDASLLAAFAKADDVLAGAVRGISDIIKRPGMINVDFADVKTVMSE-MGMAMMG 227 (394)
T ss_dssp HHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSBCSSCCCHHHHHHHHTT-TCCBEEE
T ss_pred HHHHHHHHhCCEEEEEecHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccHHHHHHhccC-CCceeEE
Confidence 346677777777666666542 21 245566667777766666667778888999999999976 6888888
Q ss_pred CCc
Q 010992 475 FSG 477 (496)
Q Consensus 475 Fss 477 (496)
++.
T Consensus 228 ~g~ 230 (394)
T 2vaw_A 228 TGC 230 (394)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 353
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=26.02 E-value=59 Score=23.45 Aligned_cols=21 Identities=10% Similarity=0.325 Sum_probs=13.6
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 010992 395 DEFGNRILTKRSIQELVNQID 415 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (496)
+.+++..|++..|..+++.+.
T Consensus 21 D~d~~G~i~~~el~~~l~~~g 41 (86)
T 2opo_A 21 DTNGDGKISSSELGDALKTLG 41 (86)
T ss_dssp CTTCSSEEEHHHHHHHHHTTT
T ss_pred CCCCCCCcCHHHHHHHHHHcC
Confidence 345556677777777777664
No 354
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=25.70 E-value=1.1e+02 Score=28.02 Aligned_cols=68 Identities=15% Similarity=0.087 Sum_probs=41.2
Q ss_pred CCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCc
Q 010992 402 LTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNM 470 (496)
Q Consensus 402 LtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI 470 (496)
+....++.||+=|= ....++++..+-||.+||.|--.-+...|.-.-.+.-+.-.+.++ |.|...||+
T Consensus 221 ~~~~~f~~~L~~iYt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~-l~~A~~~~~ 289 (312)
T 3hqi_A 221 VEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEI-LILADLHSA 289 (312)
T ss_dssp SCHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHH-HHHHHHTTC
T ss_pred CCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHH-HHHHHHhCC
Confidence 56778888888773 233455666667889999986666666665444443333344554 444444553
No 355
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=25.68 E-value=70 Score=33.84 Aligned_cols=18 Identities=11% Similarity=-0.188 Sum_probs=9.6
Q ss_pred CCcchhhHHHHHhhhcCc
Q 010992 453 DTLEAKDILVHLERNWNM 470 (496)
Q Consensus 453 dTLEvKDVQLhLERnWNI 470 (496)
..|++.++++.+...|..
T Consensus 685 G~Is~~el~~l~~~~~~~ 702 (714)
T 3bow_A 685 GTIQLDLISWLSFSVLGK 702 (714)
T ss_dssp SEEEEEHHHHHHHHHHCC
T ss_pred CcEEHHHHHHHHHHHHHH
Confidence 345566665555554443
No 356
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=25.56 E-value=25 Score=33.93 Aligned_cols=75 Identities=17% Similarity=0.199 Sum_probs=51.1
Q ss_pred cCCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHH----Hhhh--hcCCCCcchhhHHHHHhhhcCcccc
Q 010992 401 ILTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFGC----SLAK--HRKSDTLEAKDILVHLERNWNMTLP 473 (496)
Q Consensus 401 ILtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvt~AC----rLAK--HRKSdTLEvKDVQLhLERnWNI~IP 473 (496)
-|.-++...+++.|. .-.++|++-.+...+=+++|++.+-...- .|++ .++...|...|.--||.|.||+.+-
T Consensus 147 Wldp~n~~~~a~~I~~~L~~~DP~~a~~Y~~Na~~~~~~L~~Ld~~~~~~l~~~~~~~r~~v~~H~af~Yfa~~yGL~~~ 226 (321)
T 1xvl_A 147 WMSPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEI 226 (321)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCEEEEEESTTHHHHHHTTCEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCEEEEECchHHHHHHHCCCeEE
Confidence 456666667777663 33467778777788888888876654333 3442 3445567788999999999999865
Q ss_pred CC
Q 010992 474 GF 475 (496)
Q Consensus 474 GF 475 (496)
|+
T Consensus 227 ~~ 228 (321)
T 1xvl_A 227 YM 228 (321)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 357
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=25.52 E-value=82 Score=27.72 Aligned_cols=38 Identities=16% Similarity=0.350 Sum_probs=25.0
Q ss_pred cCCHHHHHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHH
Q 010992 401 ILTKRSIQELVNQIDPS---ERLDPDVEDILVDIAEDFVES 438 (496)
Q Consensus 401 ILtKrKLqELVrqIDPs---esLDpDVEELLLeIADDFVDs 438 (496)
|-+|+-|.+|++-|.+. ...+.+|.+-+|+|..+|-+.
T Consensus 87 ias~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~ 127 (149)
T 3g2s_A 87 VGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVG 127 (149)
T ss_dssp HTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHHHHH
Confidence 34667777777777654 356777777777777666553
No 358
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium}
Probab=25.45 E-value=79 Score=29.47 Aligned_cols=44 Identities=11% Similarity=0.271 Sum_probs=33.3
Q ss_pred CCCCHHHHHHHHHHH---H-HHHHHHHHHHHHhhhhcCCCCcchhhHHHHH
Q 010992 418 ERLDPDVEDILVDIA---E-DFVESITMFGCSLAKHRKSDTLEAKDILVHL 464 (496)
Q Consensus 418 esLDpDVEELLLeIA---D-DFVDsVvt~ACrLAKHRKSdTLEvKDVQLhL 464 (496)
..|++++.++|.+.. | .-+++|++.+|.+|+ .+.|+.+||...+
T Consensus 202 ~~~s~~a~~~L~~~~wpGnvReL~~~l~~~~~~~~---~~~i~~~~l~~~~ 249 (304)
T 1ojl_A 202 KGFTPQAMDLLIHYDWPGNIRELENAIERAVVLLT---GEYISERELPLAI 249 (304)
T ss_dssp CCBCHHHHHHHHHCCCSSHHHHHHHHHHHHHHHCC---SSSBCGGGSCGGG
T ss_pred cCCCHHHHHHHHcCCCCCCHHHHHHHHHHHHHhCC---CCcccHHhhhhhh
Confidence 579999999998764 1 357789999998886 3568888885444
No 359
>2a7w_A PRA-PH, phosphoribosyl-ATP pyrophosphatase; structural genomics, PSI, protein structure initiative; 2.80A {Chromobacterium violaceum} SCOP: a.204.1.4
Probab=25.42 E-value=79 Score=27.56 Aligned_cols=41 Identities=17% Similarity=0.305 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCc
Q 010992 422 PDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNM 470 (496)
Q Consensus 422 pDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI 470 (496)
.+-++++-|+||=| -...-|..+++ |++.||.-.|+|..++
T Consensus 55 ~d~~el~~E~ADLl-----YHllVlL~~~g---v~l~dV~~eL~~R~~~ 95 (116)
T 2a7w_A 55 KDKLHLVREVADLW-----FHTMVLLTYHG---LRPEDVVMELHRREGI 95 (116)
T ss_dssp TCHHHHHHHHHHHH-----HHHHHHHHHTT---CCHHHHHHHHHHHCC-
T ss_pred CCHHHHHHHHHHHH-----HHHHHHHHHcC---CCHHHHHHHHHHHhcc
Confidence 44555666666532 22333333333 6799999999999876
No 360
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=25.37 E-value=74 Score=23.86 Aligned_cols=16 Identities=6% Similarity=0.152 Sum_probs=9.0
Q ss_pred cCCCCcchhhHHHHHh
Q 010992 450 RKSDTLEAKDILVHLE 465 (496)
Q Consensus 450 RKSdTLEvKDVQLhLE 465 (496)
.+...|+.++..-.|.
T Consensus 92 ~~dg~i~~~eF~~~~~ 107 (109)
T 5pal_A 92 DHDGKIGADEFAKMVA 107 (109)
T ss_dssp TCSSSEEHHHHHHHHH
T ss_pred CCCCcCcHHHHHHHHH
Confidence 3455666666654443
No 361
>3j21_S 50S ribosomal protein L22P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=25.25 E-value=1.1e+02 Score=27.55 Aligned_cols=55 Identities=13% Similarity=0.160 Sum_probs=37.8
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHH--------------------------------HHHHHHHHHHHHHHHhhh
Q 010992 401 ILTKRSIQELVNQIDPSERLDPDVEDILVD--------------------------------IAEDFVESITMFGCSLAK 448 (496)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLe--------------------------------IADDFVDsVvt~ACrLAK 448 (496)
=++-+|+.++++.|-+. .++ ++.++|-+ =|-+||..++..|...|.
T Consensus 26 rvS~kk~r~va~~IrG~-~v~-~A~~~L~~V~~~k~~vPf~r~~~gvg~~~~~~~~~gr~PkKaa~~ilklL~sA~aNAe 103 (155)
T 3j21_S 26 RISPKLAVEVCRELRGM-MLN-DALRYLDDVIALKRPVPLKRYNDSQGHKPGKGFGPGRYPVKVAKAIKKVLLNVKNNAV 103 (155)
T ss_dssp ESCHHHHHHHHHHHTTC-BHH-HHHHHHHHHHHTCSCEECCSSCTTCCBCCSSSCSBEECCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHCCC-cHH-HHHHHHHHHHhcccceeeeeecCCCccccccCCCcCcCcHHHHHHHHHHHHHHHHHHH
Confidence 35788999999999543 232 34444443 255899999999999999
Q ss_pred hcCCCCcchhhH
Q 010992 449 HRKSDTLEAKDI 460 (496)
Q Consensus 449 HRKSdTLEvKDV 460 (496)
+.+ ||+.++
T Consensus 104 ~kg---ld~d~L 112 (155)
T 3j21_S 104 QKG---LDPDKL 112 (155)
T ss_dssp HHT---CCGGGC
T ss_pred HcC---CChhhe
Confidence 865 444443
No 362
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=25.24 E-value=16 Score=34.55 Aligned_cols=72 Identities=8% Similarity=0.126 Sum_probs=44.6
Q ss_pred CcCCccC----CHHHHHHHHHhhCCCC-------CCCHHHHHHHHHHHHHH--HHHHHHHHHHhhhhcCCCCcchhhHHH
Q 010992 396 EFGNRIL----TKRSIQELVNQIDPSE-------RLDPDVEDILVDIAEDF--VESITMFGCSLAKHRKSDTLEAKDILV 462 (496)
Q Consensus 396 e~~nrIL----tKrKLqELVrqIDPse-------sLDpDVEELLLeIADDF--VDsVvt~ACrLAKHRKSdTLEvKDVQL 462 (496)
+++.+|+ ++++|+++++++.... .=.++|++++-++.++| ||-+++.|- ......-..++.+|...
T Consensus 51 ~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG-~~~~~~~~~~~~e~w~~ 129 (273)
T 4fgs_A 51 AEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAG-GGSMLPLGEVTEEQYDD 129 (273)
T ss_dssp HTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCC-CCCCCCTTSCCHHHHHH
T ss_pred HCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC-CCCCCChhhccHHHHHH
Confidence 4555554 7889999999986532 22255777777777777 444444443 23444455567777766
Q ss_pred HHhhhc
Q 010992 463 HLERNW 468 (496)
Q Consensus 463 hLERnW 468 (496)
.++-|+
T Consensus 130 ~~~vNl 135 (273)
T 4fgs_A 130 TFDRNV 135 (273)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 666554
No 363
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=25.22 E-value=2e+02 Score=23.13 Aligned_cols=42 Identities=14% Similarity=0.373 Sum_probs=26.6
Q ss_pred ccCCHHHHHHHHHh-hCC--CCCCCHH-HHHHHHHH---------HHHHHHHHHH
Q 010992 400 RILTKRSIQELVNQ-IDP--SERLDPD-VEDILVDI---------AEDFVESITM 441 (496)
Q Consensus 400 rILtKrKLqELVrq-IDP--sesLDpD-VEELLLeI---------ADDFVDsVvt 441 (496)
..|++..|..+++. +.. ...++++ |+++|.++ .+|||.-+..
T Consensus 30 G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~ 84 (104)
T 3zwh_A 30 FKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSS 84 (104)
T ss_dssp TSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred CeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 58999999999985 532 2344554 55555554 2477765543
No 364
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=25.18 E-value=1.6e+02 Score=23.82 Aligned_cols=20 Identities=10% Similarity=0.152 Sum_probs=15.7
Q ss_pred CCcCCccCCHHHHHHHHHhh
Q 010992 395 DEFGNRILTKRSIQELVNQI 414 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI 414 (496)
+.+++..|++..|..+++.+
T Consensus 23 D~d~dG~i~~~E~~~~l~~~ 42 (191)
T 2ccm_A 23 DCNHDGVIEWDDFELAIKKI 42 (191)
T ss_dssp CTTCSSEECHHHHHHHHHHH
T ss_pred cCCCCCeeeHHHHHHHHHHH
Confidence 55677788888888888877
No 365
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=25.17 E-value=26 Score=29.88 Aligned_cols=32 Identities=16% Similarity=0.155 Sum_probs=24.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010992 417 SERLDPDVEDILVDIAEDFVESITMFGCSLAK 448 (496)
Q Consensus 417 sesLDpDVEELLLeIADDFVDsVvt~ACrLAK 448 (496)
...=|++|.++|++|+||=++-+.++---|-+
T Consensus 42 ~~~~d~~~k~vl~~i~~EEkeH~g~~lelLrr 73 (95)
T 3k6c_A 42 NACKDKELKAILAHNRDEEKEHAAMLLEWIRR 73 (95)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45779999999999999877777776555544
No 366
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=25.07 E-value=41 Score=24.04 Aligned_cols=21 Identities=10% Similarity=0.324 Sum_probs=14.4
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 010992 395 DEFGNRILTKRSIQELVNQID 415 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (496)
+.+++..|++..|..+++.+.
T Consensus 18 D~d~~G~i~~~el~~~l~~~g 38 (81)
T 1c7v_A 18 DANGDGVIDFDEFKFIMQKVG 38 (81)
T ss_dssp SCSGGGEECHHHHHHHSSTTT
T ss_pred CCCCCCcCCHHHHHHHHHHhC
Confidence 345566788888887777663
No 367
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=25.05 E-value=1.3e+02 Score=23.87 Aligned_cols=21 Identities=5% Similarity=0.213 Sum_probs=13.7
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 010992 395 DEFGNRILTKRSIQELVNQID 415 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (496)
+.+++..|++..|..+++.+.
T Consensus 19 D~d~dG~i~~~E~~~~l~~~~ 39 (185)
T 2sas_A 19 DMNHDGSIQDNDFEDMMTRYK 39 (185)
T ss_dssp CTTCSSEECHHHHHHHHHHHH
T ss_pred eCCCCCeEcHHHHHHHHHHHH
Confidence 455666777777777776654
No 368
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=24.91 E-value=1.4e+02 Score=22.85 Aligned_cols=21 Identities=5% Similarity=0.101 Sum_probs=9.6
Q ss_pred HhhhhcCCCCcchhhHHHHHh
Q 010992 445 SLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 445 rLAKHRKSdTLEvKDVQLhLE 465 (496)
++.-..+...|+..++.-.|.
T Consensus 83 ~~~D~d~~G~i~~~el~~~l~ 103 (140)
T 1ggw_A 83 QVFDKDATGMIGVGELRYVLT 103 (140)
T ss_dssp HTTCSSCSSCCCHHHHHHHHH
T ss_pred HHhCCCCCCcEeHHHHHHHHH
Confidence 333333444455555544443
No 369
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=24.74 E-value=88 Score=25.01 Aligned_cols=44 Identities=11% Similarity=0.216 Sum_probs=28.9
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHH----------HHHHHHHHH
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAE----------DFVESITMF 442 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIAD----------DFVDsVvt~ 442 (496)
+.+++..|++..|.++++ +..++++..+.|++.+| ||+.-+...
T Consensus 24 D~d~dG~I~~~El~~~l~----~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~ 77 (111)
T 2kgr_A 24 DKTMSGHLTGPQARTILM----QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLI 77 (111)
T ss_dssp SCSSCCEEEHHHHHHHHH----TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHH----hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 556677889999999888 24566654444555554 787665443
No 370
>3pf7_A Benzoyl-COA oxygenase component B; DIIRON center, epoxidase, benzoyl coenzyme A, oxidoreductase; 1.90A {Azoarcus evansii} PDB: 3per_A 3pm5_A* 3q1g_A
Probab=24.73 E-value=87 Score=33.18 Aligned_cols=54 Identities=13% Similarity=0.192 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHHHh---------hhhcCCCCcchhhHHHHHhhhcCccccCCCccccc
Q 010992 428 LVDIAEDFVESITMFGCSL---------AKHRKSDTLEAKDILVHLERNWNMTLPGFSGDEIK 481 (496)
Q Consensus 428 LLeIADDFVDsVvt~ACrL---------AKHRKSdTLEvKDVQLhLERnWNI~IPGFssDEIr 481 (496)
=+...++-|..|+..+|.+ ||.|+.-.|++..+|-+|.+-|=..+==||.++..
T Consensus 243 H~~~Ge~gl~rli~~t~e~~~~~gt~d~~~~r~~g~i~l~~~Q~alNrWwp~~LdmFGp~~S~ 305 (481)
T 3pf7_A 243 HLFVGESGIARVIQRTCEVMKELGTDDPAKLRAAGVIDLPTLQKYLNFHYSVTSDLYGAEISS 305 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHTTCCCHHHHHHHHHHHHHHHHGGGCCSSCH
T ss_pred HHHHHHHHHHHHHHHHHHhhhccCcchhhhhhhcccccHHHHHHHHHHHhHHHHHHhCCCCCc
Confidence 3566777888899999987 56788888999999999999998888778876543
No 371
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=24.58 E-value=2.3e+02 Score=21.42 Aligned_cols=43 Identities=21% Similarity=0.417 Sum_probs=25.5
Q ss_pred CccCCHHHHHHHHHhhCC---CCCCCHH-HHHHHHHH---------HHHHHHHHHH
Q 010992 399 NRILTKRSIQELVNQIDP---SERLDPD-VEDILVDI---------AEDFVESITM 441 (496)
Q Consensus 399 nrILtKrKLqELVrqIDP---sesLDpD-VEELLLeI---------ADDFVDsVvt 441 (496)
...|++..|..+++..-+ +..++++ |++++.++ -+||+.-+..
T Consensus 25 ~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 80 (92)
T 3rm1_A 25 KHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAM 80 (92)
T ss_dssp TTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred cCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 358999999999998211 2345544 55544443 3466665443
No 372
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=24.56 E-value=64 Score=24.24 Aligned_cols=59 Identities=12% Similarity=0.170 Sum_probs=0.0
Q ss_pred CC-cCCc-cCCHHHHHHHH-HhhCCCCCCCHHHHHHHHHH---------HHHHHHHH--HHHHHHhhhhcCCCC
Q 010992 395 DE-FGNR-ILTKRSIQELV-NQIDPSERLDPDVEDILVDI---------AEDFVESI--TMFGCSLAKHRKSDT 454 (496)
Q Consensus 395 ~e-~~nr-ILtKrKLqELV-rqIDPsesLDpDVEELLLeI---------ADDFVDsV--vt~ACrLAKHRKSdT 454 (496)
+. +++. .|++..|..++ +.+.....- .++++++.++ -++|+.-+ +..+|...-|+.++.
T Consensus 20 D~~d~dG~~I~~~El~~~l~~~~g~~~~~-~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~~~~~ 92 (93)
T 1xk4_A 20 SLIKGNFHAVYRDDLKKLLETESPQYIRK-KGADVWFKELDINTDGAVNFQEFLILVIKMGVAAHKKSHEESHK 92 (93)
T ss_dssp HTSSSCTTCBCHHHHHHHHHHHSCHHHHT-TCHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHC-----
T ss_pred hhcCCCcCeECHHHHHHHHHHHCcccCCH-HHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHHHhhcccC
No 373
>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus}
Probab=24.53 E-value=16 Score=29.84 Aligned_cols=27 Identities=19% Similarity=0.516 Sum_probs=21.9
Q ss_pred hhcCCCCcchhhHHHHHhhhcCccccC
Q 010992 448 KHRKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 448 KHRKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
..-+-|.|++-+|...||++||+.|+.
T Consensus 54 ~dLGlDSL~~veLi~~lE~~fgi~i~~ 80 (101)
T 4dxe_H 54 DDLGADSLDIAELVMELEDEFGTEIPD 80 (101)
T ss_dssp TTSCCCHHHHHHHHHHHHHHTTCCCCH
T ss_pred hhcCCCcHHHHHHHHHHHHHHCCCCCH
Confidence 334677788889999999999999974
No 374
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=24.48 E-value=60 Score=29.49 Aligned_cols=57 Identities=11% Similarity=0.008 Sum_probs=39.6
Q ss_pred HHHHHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHH----HHHHHHHhhhhcCCCCcchhhH
Q 010992 404 KRSIQELVNQIDPS-ERLDPDVEDILVDIAEDFVES----ITMFGCSLAKHRKSDTLEAKDI 460 (496)
Q Consensus 404 KrKLqELVrqIDPs-esLDpDVEELLLeIADDFVDs----Vvt~ACrLAKHRKSdTLEvKDV 460 (496)
.+++.+|++.+... ..+++.....++++++.++.. .+..++.||+.-+-+.-++.|+
T Consensus 144 ~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~ 205 (287)
T 3pef_A 144 YDEAMPGFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDV 205 (287)
T ss_dssp HHHHHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 46788888888653 245555566777888888776 6677888999877665444444
No 375
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=24.42 E-value=33 Score=27.79 Aligned_cols=15 Identities=13% Similarity=0.195 Sum_probs=7.4
Q ss_pred hhhhcCCCCcchhhH
Q 010992 446 LAKHRKSDTLEAKDI 460 (496)
Q Consensus 446 LAKHRKSdTLEvKDV 460 (496)
.|-..+...|+..+.
T Consensus 64 ~~D~d~dG~I~~~EF 78 (110)
T 1iq3_A 64 LSDADCDGALTLPEF 78 (110)
T ss_dssp HHCSSSCSEEEHHHH
T ss_pred HHcCCCCCcCcHHHH
Confidence 344444555555554
No 376
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=24.39 E-value=89 Score=21.01 Aligned_cols=10 Identities=10% Similarity=0.351 Sum_probs=5.0
Q ss_pred HHHHHHhhCC
Q 010992 407 IQELVNQIDP 416 (496)
Q Consensus 407 LqELVrqIDP 416 (496)
|.++.+.+|.
T Consensus 3 l~~~F~~~D~ 12 (67)
T 1tiz_A 3 AKRVFEKFDK 12 (67)
T ss_dssp HHHHHHHHCT
T ss_pred HHHHHHHHCC
Confidence 4455555543
No 377
>2xb0_X Chromo domain-containing protein 1; hydrolase, DNA-binding protein, transcription, chromatin REG; HET: GOL; 2.00A {Saccharomyces cerevisiae} PDB: 3ted_A
Probab=24.35 E-value=87 Score=30.43 Aligned_cols=43 Identities=14% Similarity=0.209 Sum_probs=30.3
Q ss_pred ccCCHHHHHHHHHhh----CCCCCCCHHHH---------HHHHHHHHHHHHHHHHH
Q 010992 400 RILTKRSIQELVNQI----DPSERLDPDVE---------DILVDIAEDFVESITMF 442 (496)
Q Consensus 400 rILtKrKLqELVrqI----DPsesLDpDVE---------ELLLeIADDFVDsVvt~ 442 (496)
..|+++.|+.|+|.| |+..++|.=|+ +.|.++++++|+.+...
T Consensus 4 ~~ltekEiR~l~Ra~~kfG~~~~R~e~I~~dA~L~~ks~~~i~~~~~~li~~c~~a 59 (270)
T 2xb0_X 4 GSIGESEVRALYKAILKFGNLKEILDELIADGTLPVKSFEKYGETYDEMMEAAKDC 59 (270)
T ss_dssp CCCCHHHHHHHHHHHHHHSSCTTCHHHHHHTTSSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHH
Confidence 358888899999887 66666555544 56888888888755443
No 378
>4aq3_A Apoptosis regulator BCL-2, BCL-2-like protein 1; chimera; HET: 398; 2.40A {Homo sapiens} PDB: 1g5m_A 1gjh_A 1ysw_A* 2o21_A* 2o22_A*
Probab=24.09 E-value=83 Score=28.33 Aligned_cols=45 Identities=11% Similarity=0.227 Sum_probs=31.1
Q ss_pred HHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH---------HHHHHHHhhhhcC
Q 010992 404 KRSIQELVNQIDPSERLDPDVEDILVDIAEDFVES---------ITMFGCSLAKHRK 451 (496)
Q Consensus 404 KrKLqELVrqIDPsesLDpDVEELLLeIADDFVDs---------Vvt~ACrLAKHRK 451 (496)
++.+.+|+++++-.. +.+.+.+.++|++..+| ++.|++.||++--
T Consensus 71 ~~~f~~~~~~L~it~---~~a~~~F~~Va~elF~dGiNWGRIVaLfaF~g~La~~~~ 124 (169)
T 4aq3_A 71 RGDFAEMSSQLHLTP---FTARGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESV 124 (169)
T ss_dssp HHHHHHHHHHCCCCT---TTHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCC---CcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 446677777764322 25788888999987655 5678888887643
No 379
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=24.01 E-value=50 Score=23.56 Aligned_cols=21 Identities=24% Similarity=0.396 Sum_probs=15.4
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 010992 395 DEFGNRILTKRSIQELVNQID 415 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (496)
+.+++..|++..|..+++.+.
T Consensus 17 D~d~~G~i~~~el~~~l~~~~ 37 (83)
T 1yx7_A 17 DANGDGYVTALELQTFMVTLD 37 (83)
T ss_dssp SSSCSSSCSHHHHHHHHHHHT
T ss_pred CCCCCCcCcHHHHHHHHHHHc
Confidence 445666788888888888775
No 380
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=23.95 E-value=1.7e+02 Score=31.05 Aligned_cols=74 Identities=14% Similarity=0.144 Sum_probs=48.3
Q ss_pred cCCccCCHHHHHHHHHhh-C-----CCCCCCHHHHHHHHHHH----------HHHHHHH-----HHHHHHhhhhcCCCCc
Q 010992 397 FGNRILTKRSIQELVNQI-D-----PSERLDPDVEDILVDIA----------EDFVESI-----TMFGCSLAKHRKSDTL 455 (496)
Q Consensus 397 ~~nrILtKrKLqELVrqI-D-----PsesLDpDVEELLLeIA----------DDFVDsV-----vt~ACrLAKHRKSdTL 455 (496)
+++..|++..|.++++.+ . .+..++++..+.|++++ +||+.-+ +..+.++.-..++..|
T Consensus 543 d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~~~l~~~F~~~D~d~dG~I 622 (714)
T 3bow_A 543 GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM 622 (714)
T ss_dssp GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSSE
T ss_pred CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence 456678888888888886 1 24456665555555554 3565433 4455666666677889
Q ss_pred chhhHHHHHhhhcCcc
Q 010992 456 EAKDILVHLERNWNMT 471 (496)
Q Consensus 456 EvKDVQLhLERnWNI~ 471 (496)
+.+++.-.|+. .|+.
T Consensus 623 s~~El~~~L~~-~G~~ 637 (714)
T 3bow_A 623 NSYEMRKALEE-AGFK 637 (714)
T ss_dssp EHHHHHHHHHH-TTEE
T ss_pred CHHHHHHHHHH-cCCC
Confidence 99999888864 4544
No 381
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=23.94 E-value=56 Score=25.30 Aligned_cols=19 Identities=0% Similarity=0.085 Sum_probs=10.2
Q ss_pred CcCCccCCHHHHHHHHHhh
Q 010992 396 EFGNRILTKRSIQELVNQI 414 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqI 414 (496)
.+++..|++..|..+++.+
T Consensus 94 ~d~~G~I~~~el~~~l~~~ 112 (148)
T 1m45_A 94 KESTGKVSVGDLRYMLTGL 112 (148)
T ss_dssp SSSSSEEEHHHHHHHHHHS
T ss_pred CCCCCcCCHHHHHHHHHHc
Confidence 3444455555555555554
No 382
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=23.87 E-value=1.8e+02 Score=29.86 Aligned_cols=69 Identities=7% Similarity=0.211 Sum_probs=37.4
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHHH---------HHHHHHHH------------HHHHHHhhhhcCCC
Q 010992 396 EFGNRILTKRSIQELVNQIDPSERLDPD-VEDILVDI---------AEDFVESI------------TMFGCSLAKHRKSD 453 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLeI---------ADDFVDsV------------vt~ACrLAKHRKSd 453 (496)
.+++..|++..|.++++.+.. .++.+ +++++..+ .+||+.-+ +..+++..-..++.
T Consensus 323 ~D~dG~Is~~EL~~~L~~lg~--~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG 400 (450)
T 3sg6_A 323 KDGDGTITTKELGTVMRSLGQ--NPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG 400 (450)
T ss_dssp TTCSSEECHHHHHHHHHHTTC--CCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSS
T ss_pred CCCCCcCcHHHHHHHHHHhCC--CCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCC
Confidence 345556666666666666533 23333 33333222 24555433 33345555455667
Q ss_pred CcchhhHHHHHhh
Q 010992 454 TLEAKDILVHLER 466 (496)
Q Consensus 454 TLEvKDVQLhLER 466 (496)
.|+..++.-.|+.
T Consensus 401 ~Is~eELr~~L~~ 413 (450)
T 3sg6_A 401 YISAAELRHVMTN 413 (450)
T ss_dssp EECHHHHHHHHHH
T ss_pred eEeHHHHHHHHHH
Confidence 7888888777765
No 383
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=23.83 E-value=1.9e+02 Score=22.95 Aligned_cols=19 Identities=26% Similarity=0.560 Sum_probs=13.9
Q ss_pred cCCc-cCCHHHHHHHHH-hhC
Q 010992 397 FGNR-ILTKRSIQELVN-QID 415 (496)
Q Consensus 397 ~~nr-ILtKrKLqELVr-qID 415 (496)
++.. .|++..|.++++ .+.
T Consensus 25 dgdG~~Is~~El~~~l~~~lg 45 (113)
T 1xk4_C 25 LGHPDTLNQGEFKELVRKDLQ 45 (113)
T ss_dssp SSSTTSBCHHHHHHHHHHHTT
T ss_pred CCCCCEECHHHHHHHHHHHhh
Confidence 4445 788888888888 554
No 384
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=23.81 E-value=1e+02 Score=24.87 Aligned_cols=28 Identities=0% Similarity=-0.032 Sum_probs=17.6
Q ss_pred HHHHhhhhcCCCCcchhhHHHHHhhhcCc
Q 010992 442 FGCSLAKHRKSDTLEAKDILVHLERNWNM 470 (496)
Q Consensus 442 ~ACrLAKHRKSdTLEvKDVQLhLERnWNI 470 (496)
.+.++.-.-+...|+..++.-.|+. +|.
T Consensus 113 ~~F~~~D~d~~G~Is~~El~~~l~~-~g~ 140 (191)
T 1uhk_A 113 ALFDIVDKDQNGAITLDEWKAYTKA-AGI 140 (191)
T ss_dssp HHHHHHCTTCSSEECHHHHHHHHHH-HTS
T ss_pred HHHHHhcCCCCCcCcHHHHHHHHHH-hCC
Confidence 4555554556667888888777754 443
No 385
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=23.81 E-value=1.4e+02 Score=31.78 Aligned_cols=68 Identities=12% Similarity=0.215 Sum_probs=40.4
Q ss_pred HHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----CCCCcchhhHHHHHhhhcCccc-cCCCcc
Q 010992 407 IQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHR-----KSDTLEAKDILVHLERNWNMTL-PGFSGD 478 (496)
Q Consensus 407 LqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHR-----KSdTLEvKDVQLhLERnWNI~I-PGFssD 478 (496)
+.+++++. ....|+=-.=+|.-|||.+.|.+++.....-+.. +.+.++.+|+ +-|+.-|++. |||.+-
T Consensus 421 ~~~~~~~~--~~~~ddy~~i~~~ala~~laEa~aE~~h~~vR~~~wg~~~~e~~~~~~~--~~~~Y~g~R~spGYpac 494 (579)
T 3bul_A 421 EDALADAF--EAQHDDYNKIMVKALADRLAEAFAEYLHERVRKVYWGYAPNENLSNEEL--IRENYQGIRPAPGYPAC 494 (579)
T ss_dssp HHHHHHHH--HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCTTCCCCHHHH--HTTCSSCBCCCTTSTTS
T ss_pred HHHHHHHH--HhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccCHHHH--HhccCCccCCCCCCCCC
Confidence 56666665 2223433333445677777777777776655543 2345777775 4455556877 899853
No 386
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=23.72 E-value=63 Score=23.30 Aligned_cols=65 Identities=6% Similarity=0.071 Sum_probs=40.2
Q ss_pred HHHHHHHHHhhCCC--CCCCH-HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcC
Q 010992 404 KRSIQELVNQIDPS--ERLDP-DVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWN 469 (496)
Q Consensus 404 KrKLqELVrqIDPs--esLDp-DVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWN 469 (496)
..+|.++.+.+|.+ ..|+. |+.++|..+. .+-+..+...++.+-..+...|+..+..-.+.+..+
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 77 (86)
T 2opo_A 10 IADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANRG 77 (86)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCcc
Confidence 45677888888764 35664 3566665554 444444555555555556667888888777766543
No 387
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=23.72 E-value=75 Score=35.13 Aligned_cols=41 Identities=27% Similarity=0.353 Sum_probs=31.7
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHH
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDF 435 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDF 435 (496)
.|.++.-++...+++|++++|.+.+++-|+++..--|=+-|
T Consensus 9 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 49 (778)
T 3opb_A 9 SEKGNDPIDSSTIDSLCAAFDKTLKSTPDVQKYNDAINTIF 49 (778)
T ss_dssp SSSSSSCCCHHHHHHHHHHHHHTTTSCTTHHHHHHHHHHHT
T ss_pred hhccccccchhHHHHHHHHHhcccCCCCChHHHHHHHHHHH
Confidence 34566677799999999999999999988887655444444
No 388
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=23.71 E-value=2.7e+02 Score=21.89 Aligned_cols=67 Identities=13% Similarity=0.177 Sum_probs=35.9
Q ss_pred CCcCCccCCHHHHHH----HHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 395 DEFGNRILTKRSIQE----LVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 395 ~e~~nrILtKrKLqE----LVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+.+++..|++..|.. +++.++- ..-+.++++ |.+....+++.+. +.+-..+...|+..+..-.+.+.
T Consensus 17 D~d~~G~i~~~el~~~~~~~l~~~g~-~~~~~~~~~-l~~~~~~~~~~lf----~~~D~d~dg~i~~~Ef~~~~~~~ 87 (176)
T 1nya_A 17 DFDGNGALERADFEKEAQHIAEAFGK-DAGAAEVQT-LKNAFGGLFDYLA----KEAGVGSDGSLTEEQFIRVTENL 87 (176)
T ss_dssp CSSCCSSBCSHHHHHHHHHHHHHTSS-CSSSHHHHH-HHHHHHHHHHHHH----HHHTSCTTCCBCHHHHHHHHHHH
T ss_pred cCCCCCcccHHHHHHHHHHHHHHcCC-CCCcHHHHH-HHHHHHHHHHHHH----HHhCCCCCCeEcHHHHHHHHHHH
Confidence 556777888888888 5655432 222333443 3333344443333 33344455567777775555543
No 389
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=23.60 E-value=1.2e+02 Score=25.46 Aligned_cols=50 Identities=16% Similarity=0.153 Sum_probs=32.5
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 010992 398 GNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSD 453 (496)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSd 453 (496)
+..+.++..|.+++++++ ||. +++...+.++-+++.+....++|+..+-.
T Consensus 101 ~~~~~~~~~l~~~a~~~G----ld~--~~~~~~~~s~~~~~~v~~~~~~a~~~gv~ 150 (195)
T 3hd5_A 101 RKRLFDKKAMGEWAASQG----VDR--AKFDSVFDSFSVQTQVQRASQLAEAAHID 150 (195)
T ss_dssp CCCCCSHHHHHHHHHHTT----CCH--HHHHHHHTCHHHHHHHHHHHHHHHHTTCC
T ss_pred ccCCCCHHHHHHHHHHhC----CCH--HHHHHHHcCHHHHHHHHHHHHHHHHhCCC
Confidence 455677888888888753 443 34444555666777777777777766544
No 390
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=23.58 E-value=2.7e+02 Score=21.87 Aligned_cols=58 Identities=7% Similarity=0.105 Sum_probs=36.2
Q ss_pred HHHHhhCCC--CCCCHH-HHHHHHHH--------HHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 409 ELVNQIDPS--ERLDPD-VEDILVDI--------AEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 409 ELVrqIDPs--esLDpD-VEELLLeI--------ADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+|++.+|.+ ..|+-+ ...++..+ .++.++..+..++++.-..+...|+..++.-.|.+
T Consensus 62 ~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~ 130 (176)
T 1nya_A 62 YLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTA 130 (176)
T ss_dssp HHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHH
T ss_pred HHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 666777653 356543 33333333 23344566777777777777788888888777765
No 391
>1k6k_A ATP-dependent CLP protease ATP-binding subunit CLPA; chaperone, ATPase, adaptor binding, X-RAY, structure, N-domain, hydrolase; 1.80A {Escherichia coli} SCOP: a.174.1.1 PDB: 1r6c_X 1r6o_A* 1r6q_A* 1mg9_B* 1lzw_B* 1mbx_A* 1mbv_A 1mbu_A*
Probab=23.56 E-value=68 Score=26.08 Aligned_cols=32 Identities=6% Similarity=0.109 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 436 VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 436 VDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+..|+..|.++|+..+.+.|...+|.+.|=++
T Consensus 84 ~~~~l~~A~~~A~~~~~~~i~~ehLLlall~~ 115 (143)
T 1k6k_A 84 FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSE 115 (143)
T ss_dssp HHHHHHHHHHHHHSSSCSCBCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCCccCHHHHHHHHHhC
Confidence 45688899999999999999999999988653
No 392
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=23.55 E-value=79 Score=27.19 Aligned_cols=76 Identities=8% Similarity=0.115 Sum_probs=52.3
Q ss_pred HHHHHHHHHhhCCC-CCCCH-HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHH----HHhhhcCccccCCCc
Q 010992 404 KRSIQELVNQIDPS-ERLDP-DVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILV----HLERNWNMTLPGFSG 477 (496)
Q Consensus 404 KrKLqELVrqIDPs-esLDp-DVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQL----hLERnWNI~IPGFss 477 (496)
|.+++++.+.+|++ ..|+. ++.++|.+. ..=++++.....||-..+...|+..+..+ +-.+..|+.||....
T Consensus 32 ~~~y~~iF~~lD~~dG~Isg~elr~~~~~s--gLp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~Li~~~~~G~~lP~~LP 109 (121)
T 3fia_A 32 RAKHDQQFHSLKPISGFITGDQARNFFFQS--GLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQLPSALP 109 (121)
T ss_dssp HHHHHHHHHHTCCBTTBEEHHHHHHHHGGG--CCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTTCCCCSSCC
T ss_pred HHHHHHHHHHhCCCCCeECHHHHHHHHHHc--CCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 67788888888863 24554 466666543 34466777778899888998898887633 224445788887777
Q ss_pred cccc
Q 010992 478 DEIK 481 (496)
Q Consensus 478 DEIr 481 (496)
+++.
T Consensus 110 ~~l~ 113 (121)
T 3fia_A 110 PVMK 113 (121)
T ss_dssp GGGC
T ss_pred HHHH
Confidence 6664
No 393
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=23.54 E-value=71 Score=23.30 Aligned_cols=65 Identities=6% Similarity=0.155 Sum_probs=40.5
Q ss_pred HHHHHHHHHhhCCC--CCCCH-HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhc
Q 010992 404 KRSIQELVNQIDPS--ERLDP-DVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 404 KrKLqELVrqIDPs--esLDp-DVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (496)
+.+|.++.+.+|.+ ..|+. |+..+|..+...+-+..+...++.+-..+...|+..+..-.+.+..
T Consensus 8 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~ 75 (92)
T 2kn2_A 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVR 75 (92)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhcc
Confidence 56788888888764 35664 3666666654333344445555555556677788888866665543
No 394
>2r9v_A ATP synthase subunit alpha; TM1612, structural genomics, JOI for structural genomics, JCSG, protein structure initiative ATP synthesis; HET: ATP PG4; 2.10A {Thermotoga maritima MSB8}
Probab=23.48 E-value=37 Score=35.83 Aligned_cols=31 Identities=23% Similarity=0.484 Sum_probs=24.7
Q ss_pred HHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH
Q 010992 408 QELVNQIDPSERLDPDVEDILVDIAEDFVES 438 (496)
Q Consensus 408 qELVrqIDPsesLDpDVEELLLeIADDFVDs 438 (496)
.+++++|+.+..||+|.++.|.+++++|.+.
T Consensus 482 ~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~ 512 (515)
T 2r9v_A 482 QDILDDIKTKKELTSETEEKLKKAIEEFKTT 512 (515)
T ss_dssp HHHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Confidence 3566677677789999999999999998753
No 395
>1khy_A CLPB protein; alpha helix, chaperone; 1.95A {Escherichia coli} SCOP: a.174.1.1
Probab=23.41 E-value=79 Score=25.77 Aligned_cols=31 Identities=16% Similarity=0.073 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 436 VESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 436 VDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+..++..|..+|+.++...|+.+.|.+.|=+
T Consensus 10 ~~~~l~~A~~~A~~~~~~~i~~eHlLlaLl~ 40 (148)
T 1khy_A 10 FQLALADAQSLALGHDNQFIEPLHLMSALLN 40 (148)
T ss_dssp HHHHHHHHHHHHHHTTCSSBCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCccCHHHHHHHHHc
Confidence 4456777888999999999999888888744
No 396
>3rh3_A Uncharacterized DUF3829-like protein; all alpha protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=23.39 E-value=52 Score=32.45 Aligned_cols=65 Identities=14% Similarity=0.290 Sum_probs=41.7
Q ss_pred HHHHHHhhCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh--hcCccc
Q 010992 407 IQELVNQIDPSERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER--NWNMTL 472 (496)
Q Consensus 407 LqELVrqIDPsesLDpD-VEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER--nWNI~I 472 (496)
+.+|.+++|.+.+|... ..+-....-++|...|-.|.-.|.|-|......-+|.. .|.. +||+.|
T Consensus 196 ~~el~~qLeaa~kLp~~~~~~~e~~~y~~flk~~e~f~~~lrk~k~~g~yS~~dy~-~l~s~Y~~~~~~ 263 (264)
T 3rh3_A 196 MAELEKELKAAEKIPAVTGYDEELKNFQSFLSTVKSFMNDMQKARSKGAYSDKEYQ-AMSEAYEYGLSV 263 (264)
T ss_dssp HHHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHH-HHHHHHTTTTCC
T ss_pred HHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHH-HHHHHHhccccc
Confidence 55666666665555211 11344566788888888888888888888888888873 3444 444543
No 397
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=23.38 E-value=1.2e+02 Score=25.30 Aligned_cols=23 Identities=22% Similarity=0.401 Sum_probs=15.1
Q ss_pred hcCCCCcchhhHHHHHhhhcCcc
Q 010992 449 HRKSDTLEAKDILVHLERNWNMT 471 (496)
Q Consensus 449 HRKSdTLEvKDVQLhLERnWNI~ 471 (496)
..+...|+..+..-.|.+.|+-.
T Consensus 173 ~d~dG~I~~~EF~~~~~~~~~~~ 195 (208)
T 2hpk_A 173 TDKSGKLERTELVHLFRKFWMEP 195 (208)
T ss_dssp TTCCSSBCHHHHHHHHHHHHC--
T ss_pred CCCCCcCcHHHHHHHHHHHhcCC
Confidence 34566788888877777766433
No 398
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=23.36 E-value=2.1e+02 Score=23.07 Aligned_cols=10 Identities=0% Similarity=0.305 Sum_probs=4.5
Q ss_pred CCCCcchhhH
Q 010992 451 KSDTLEAKDI 460 (496)
Q Consensus 451 KSdTLEvKDV 460 (496)
+...|+..+.
T Consensus 125 ~dg~i~~~eF 134 (173)
T 1alv_A 125 EGGNMDFDNF 134 (173)
T ss_dssp SSSCBCHHHH
T ss_pred CCCcCcHHHH
Confidence 3334555444
No 399
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=23.36 E-value=87 Score=23.39 Aligned_cols=19 Identities=0% Similarity=0.102 Sum_probs=10.2
Q ss_pred hhhcCCCCcchhhHHHHHh
Q 010992 447 AKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 447 AKHRKSdTLEvKDVQLhLE 465 (496)
+-..+...|+..+..-.|.
T Consensus 89 ~D~~~dg~i~~~eF~~~~~ 107 (109)
T 1rwy_A 89 GDKDGDGKIGVEEFSTLVA 107 (109)
T ss_dssp HCTTCSSSEEHHHHHHHHH
T ss_pred HCCCCCCcCCHHHHHHHHH
Confidence 3334555667666654443
No 400
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A
Probab=23.34 E-value=39 Score=33.08 Aligned_cols=66 Identities=14% Similarity=0.214 Sum_probs=34.7
Q ss_pred CCCCH-HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cchhhHHHHHhh-----hcC----ccccCCCccccccc
Q 010992 418 ERLDP-DVEDILVDIAEDFVESITMFGCSLAKHRKSDT-LEAKDILVHLER-----NWN----MTLPGFSGDEIKTF 483 (496)
Q Consensus 418 esLDp-DVEELLLeIADDFVDsVvt~ACrLAKHRKSdT-LEvKDVQLhLER-----nWN----I~IPGFssDEIr~~ 483 (496)
..|+. |+++++-+|.|.=+.++--.|+.+|-+-|.++ =|+..+...+.. .|. +-+.|+|+|-.++|
T Consensus 11 ~~Lt~eEa~~~~~~i~~g~~~~~QiaAfL~alr~kget~~Eiag~~~am~~~~~~~~~~~~~~vD~~gTGGdg~~tf 87 (329)
T 2elc_A 11 EVLEEEEAYEVMRALMAGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLM 87 (329)
T ss_dssp CCCCHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCCCCSSEEEEEECCCCSSCCC
T ss_pred CCCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCCCCCCeeEEcCCCCCCCCcc
Confidence 34443 46677777777666666666666664333332 223222222221 232 55678888766554
No 401
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=23.31 E-value=49 Score=32.28 Aligned_cols=72 Identities=14% Similarity=0.144 Sum_probs=50.2
Q ss_pred HHHHHHHHhhCCCCCCCHHHH-HH---------HHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccccC
Q 010992 405 RSIQELVNQIDPSERLDPDVE-DI---------LVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 405 rKLqELVrqIDPsesLDpDVE-EL---------LLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPG 474 (496)
.-|++|.+.+|-...||.|.. |+ -.+.+|+.|-.++.....+-+.-+.-.+|+.||+-.|.. -++.+.|
T Consensus 149 ~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~~af~~~n~~l~~~v~~it~~ir~pG~iNvD~~dv~t~l~~-~g~~~~g 227 (320)
T 1ofu_A 149 EGIRALAESVDSLITIPNEKLLTILGKDASLLAAFAKADDVLAGAVRGISDIIKRPGMINVDFADVKTVMSE-MGMAMMG 227 (320)
T ss_dssp HHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSCSSSSCCHHHHHHHHTT-CEEEEEE
T ss_pred HHHHHHHHhCCEEEEEecHHhhhhhhcCCCHHHHHHHHHHHHHHHhcccHhhcccCCceeecHHHHHHhccC-CCeeEEE
Confidence 346677777777666666642 11 145566666676666666667777788999999999986 5777877
Q ss_pred CCc
Q 010992 475 FSG 477 (496)
Q Consensus 475 Fss 477 (496)
++.
T Consensus 228 ~g~ 230 (320)
T 1ofu_A 228 TGC 230 (320)
T ss_dssp EEE
T ss_pred EEe
Confidence 763
No 402
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=23.25 E-value=91 Score=25.38 Aligned_cols=63 Identities=6% Similarity=0.041 Sum_probs=39.8
Q ss_pred HHHHHHHHhhCCC--CCCCHH-HHHHHHH---------HHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 405 RSIQELVNQIDPS--ERLDPD-VEDILVD---------IAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 405 rKLqELVrqIDPs--esLDpD-VEELLLe---------IADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
.+|.++.+.+|.+ ..|+.+ ...+|.. +.++-|+.++...++.+-..+...|+..+..-.|.+.
T Consensus 98 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 172 (183)
T 1dgu_A 98 IKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 172 (183)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHHHCSS
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhC
Confidence 4666777777643 345544 5555543 4455566666667777766777788998887666553
No 403
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=23.24 E-value=3.2e+02 Score=22.57 Aligned_cols=76 Identities=16% Similarity=0.218 Sum_probs=0.0
Q ss_pred CCc--CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH---------HHHHHHHH------------HHHHHHhhhhcC
Q 010992 395 DEF--GNRILTKRSIQELVNQIDPSERLDPDVEDILVDI---------AEDFVESI------------TMFGCSLAKHRK 451 (496)
Q Consensus 395 ~e~--~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI---------ADDFVDsV------------vt~ACrLAKHRK 451 (496)
+.+ ++..|++..|..+++. ....-+..+++++..+ .+||+.-+ +..+.++.-..+
T Consensus 47 D~d~~~~G~i~~~e~~~~l~~--~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~ 124 (207)
T 2ehb_A 47 SSSIIDDGLIHKEEFQLALFR--NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQ 124 (207)
T ss_dssp TTSSSCSSCEEHHHHHHHHHS--CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTC
T ss_pred ccccCCCCccCHHHHHHHHhc--cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCC
Q ss_pred CCCcchhhHHHHHh---hhcCccc
Q 010992 452 SDTLEAKDILVHLE---RNWNMTL 472 (496)
Q Consensus 452 SdTLEvKDVQLhLE---RnWNI~I 472 (496)
...|+..++.-.|. +.++..+
T Consensus 125 ~G~I~~~E~~~~l~~~~~~~g~~~ 148 (207)
T 2ehb_A 125 TGFIEREELKEMVVALLHESELVL 148 (207)
T ss_dssp CSSEEHHHHHHHHHHHHHHHTCCC
T ss_pred CCcCcHHHHHHHHHHHHHHccccc
No 404
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=23.23 E-value=1.2e+02 Score=29.00 Aligned_cols=37 Identities=5% Similarity=-0.005 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 430 DIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 430 eIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
.+.+...++.+..++++.-..+...|+.+++.-.|..
T Consensus 410 ~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~ 446 (484)
T 3nyv_A 410 DRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV 446 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred hccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 3333344455667777777778888999999888865
No 405
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=23.19 E-value=1.2e+02 Score=24.62 Aligned_cols=25 Identities=8% Similarity=-0.101 Sum_probs=14.4
Q ss_pred HHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 442 FGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 442 ~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
.++++.-..+...|+..++.-.|+.
T Consensus 117 ~~F~~~D~d~~G~I~~~El~~~l~~ 141 (195)
T 1qv0_A 117 AVFDIFDKDGSGTITLDEWKAYGKI 141 (195)
T ss_dssp HHHHHTC----CEECHHHHHHHHHH
T ss_pred HHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 4555555566677888888777754
No 406
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=23.18 E-value=30 Score=33.29 Aligned_cols=73 Identities=18% Similarity=0.206 Sum_probs=48.9
Q ss_pred cCCHHHHHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHH----hhhh--cCCCCcchhhHHHHHhhhcCcccc
Q 010992 401 ILTKRSIQELVNQIDP-SERLDPDVEDILVDIAEDFVESITMFGCS----LAKH--RKSDTLEAKDILVHLERNWNMTLP 473 (496)
Q Consensus 401 ILtKrKLqELVrqIDP-sesLDpDVEELLLeIADDFVDsVvt~ACr----LAKH--RKSdTLEvKDVQLhLERnWNI~IP 473 (496)
-|.-+....+++.|.. -.++|++-.+...+=+++|+..+-...-+ |++. ++...|...|.--||.|.||+.+=
T Consensus 133 Wldp~n~~~~a~~I~~~L~~~DP~~a~~Y~~Na~~~~~~L~~Ld~~~~~~l~~~p~~~~~~v~~H~af~Yfa~~yGl~~~ 212 (307)
T 3ujp_A 133 WMSPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEI 212 (307)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCGGGCEEEEEESTTHHHHHHTTCEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCEEEEECchHHHHHHHCCCcEE
Confidence 3566666666666632 34677777777777777787776554433 3432 334456678999999999999864
No 407
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=23.15 E-value=3.5e+02 Score=23.08 Aligned_cols=76 Identities=12% Similarity=0.196 Sum_probs=0.0
Q ss_pred CCc--CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH---------HHHHHHHH------------HHHHHHhhhhcC
Q 010992 395 DEF--GNRILTKRSIQELVNQIDPSERLDPDVEDILVDI---------AEDFVESI------------TMFGCSLAKHRK 451 (496)
Q Consensus 395 ~e~--~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI---------ADDFVDsV------------vt~ACrLAKHRK 451 (496)
+.+ ++..|++..|..+++. .....+.++++++..+ .+||+.-+ +..+.++.-..+
T Consensus 58 D~d~~~~G~I~~~El~~~l~~--~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~ 135 (226)
T 2zfd_A 58 SSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQ 135 (226)
T ss_dssp HTSSSCSSSBCHHHHHHHHHS--CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTS
T ss_pred CcccCCCCeEcHHHHHHHHhc--cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCC
Q ss_pred CCCcchhhHHHHHh---hhcCccc
Q 010992 452 SDTLEAKDILVHLE---RNWNMTL 472 (496)
Q Consensus 452 SdTLEvKDVQLhLE---RnWNI~I 472 (496)
...|+..++.-.|+ +..|..+
T Consensus 136 ~G~Is~~E~~~~l~~~~~~~g~~~ 159 (226)
T 2zfd_A 136 QGFIERQEVKQMVVATLAESGMNL 159 (226)
T ss_dssp SSSEEHHHHHHHHHHHHHHTTCCC
T ss_pred CCcccHHHHHHHHHHHHHHcCCCC
No 408
>3rio_A PTSGHI operon antiterminator; twisted beta sheet, four helix bundle, transcriptional antitermination, transcription; 1.99A {Bacillus subtilis}
Probab=23.07 E-value=2.1e+02 Score=25.17 Aligned_cols=14 Identities=14% Similarity=0.413 Sum_probs=7.8
Q ss_pred HHHHHhhhcCcccc
Q 010992 460 ILVHLERNWNMTLP 473 (496)
Q Consensus 460 VQLhLERnWNI~IP 473 (496)
+.-.||+.||+.||
T Consensus 150 ~~~~Ie~~~~i~lp 163 (180)
T 3rio_A 150 VIDMINEKAGLCLP 163 (180)
T ss_dssp HHHHHHHHHTSCCC
T ss_pred HHHHHHHHHCCCCC
Confidence 34455666666654
No 409
>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1
Probab=23.06 E-value=30 Score=25.88 Aligned_cols=24 Identities=17% Similarity=0.310 Sum_probs=20.2
Q ss_pred CCCCcchhhHHHHHhhhcCccccC
Q 010992 451 KSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 451 KSdTLEvKDVQLhLERnWNI~IPG 474 (496)
|-+.|.+-++...||+.||+.||-
T Consensus 37 G~DSL~~vel~~~le~~fgi~i~~ 60 (83)
T 1or5_A 37 GYDSLALLETAAVLQQRYGIALTD 60 (83)
T ss_dssp SCCHHHHHHHHHHHHTTSCCCCSH
T ss_pred CCCHHHHHHHHHHHHHHHCCccCH
Confidence 567788888899999999999974
No 410
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=22.98 E-value=1.3e+02 Score=23.28 Aligned_cols=33 Identities=9% Similarity=0.058 Sum_probs=22.2
Q ss_pred HHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCc
Q 010992 438 SITMFGCSLAKHRKSDTLEAKDILVHLERNWNM 470 (496)
Q Consensus 438 sVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI 470 (496)
..+..++++.-..+...|+..++.-+|....|.
T Consensus 75 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~ 107 (155)
T 3ll8_B 75 QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN 107 (155)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcc
Confidence 345555666666677788899988887764443
No 411
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=22.98 E-value=81 Score=27.93 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=25.5
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHH-HHHHHHHHHHH
Q 010992 406 SIQELVNQIDPSERLDPDVEDILVD-IAEDFVESITM 441 (496)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLe-IADDFVDsVvt 441 (496)
.|+.|+.+-++..-++.|+.+++.+ =-++|...|-.
T Consensus 125 si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~ 161 (172)
T 2y9m_A 125 AVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKY 161 (172)
T ss_dssp HHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHH
Confidence 3566676667778899999998887 55566655543
No 412
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=22.79 E-value=1.1e+02 Score=29.46 Aligned_cols=72 Identities=7% Similarity=0.227 Sum_probs=0.0
Q ss_pred CCcCCccCCHHHHHHHHHhh-------------CCCCCCCHHHHHHHHHH---------HHHHHH-----------HHHH
Q 010992 395 DEFGNRILTKRSIQELVNQI-------------DPSERLDPDVEDILVDI---------AEDFVE-----------SITM 441 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI-------------DPsesLDpDVEELLLeI---------ADDFVD-----------sVvt 441 (496)
|.+++..|++..|..+++++ ......++++++++..+ .+||+. +.+.
T Consensus 341 D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~ 420 (486)
T 3mwu_A 341 DTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERME 420 (486)
T ss_dssp CTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCCHHHHH
T ss_pred CCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccchHHHHH
Q ss_pred HHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 442 FGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 442 ~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
.+.++.-..+...|+.+++.-.|++
T Consensus 421 ~~F~~~D~d~dG~Is~~El~~~l~~ 445 (486)
T 3mwu_A 421 RAFKMFDKDGSGKISTKELFKLFSQ 445 (486)
T ss_dssp HHHHHHCSSCSSSBCSSCC------
T ss_pred HHHHHhCCCCCCcCCHHHHHHHHHH
No 413
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=22.71 E-value=1.2e+02 Score=26.79 Aligned_cols=45 Identities=11% Similarity=0.096 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhc
Q 010992 424 VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 424 VEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (496)
...+|..+.....++.+..+.++.-..+...|+..++.-.|+..+
T Consensus 151 f~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~ 195 (256)
T 2jul_A 151 FVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIY 195 (256)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 334444443334455666777777777788899999988877654
No 414
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=22.68 E-value=54 Score=33.45 Aligned_cols=50 Identities=14% Similarity=0.069 Sum_probs=31.3
Q ss_pred CCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHhhhhc------CCCCcchhhHHHHHhh
Q 010992 417 SERLDPDVEDILVDIAE-----DFVESITMFGCSLAKHR------KSDTLEAKDILVHLER 466 (496)
Q Consensus 417 sesLDpDVEELLLeIAD-----DFVDsVvt~ACrLAKHR------KSdTLEvKDVQLhLER 466 (496)
...|++++.+.|++-.+ .-++.++..+|+.|..+ +..+|+.+||.-+|.+
T Consensus 280 ~i~i~~~~l~~l~~~~~~~~~vR~L~~~i~~~~~~aa~~~~~~~~~~~~It~~~l~~~Lg~ 340 (543)
T 3m6a_A 280 NLQLRDQAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEERKRITVTEKNLQDFIGK 340 (543)
T ss_dssp GCEECHHHHHHHHHHHCCCSSSHHHHHHHHHHHHHHHHHHHTTCCSCCEECTTTTHHHHCS
T ss_pred cccCCHHHHHHHHHhCChhhchhHHHHHHHHHHHHHHHHHHhcCCcceecCHHHHHHHhCC
Confidence 34678888777776444 12335555555555443 4457888999877765
No 415
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=22.62 E-value=1.7e+02 Score=32.57 Aligned_cols=69 Identities=16% Similarity=0.147 Sum_probs=59.2
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhc
Q 010992 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (496)
+-.+.-.+++.|+ +-.-..+++..+--.|.-+.+-..-+|++.|...||..+...|..+||++.+...-
T Consensus 102 ~l~~pv~~~~~~l-~~~~~~r~~~~~~~y~~avleyl~~~~l~la~~~~~~~~~~~i~p~~~~~ai~~d~ 170 (1049)
T 3ksy_A 102 PLSLPVEKIHPLL-KEVLGYKIDHQVSVYIVAVLEYISADILKLVGNYVRNIRHYEITKQDIKVAMCADK 170 (1049)
T ss_dssp SCSSCHHHHHHHH-HHHHCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCHHHHHHHHHHCS
T ss_pred CccccHHHHHHHh-hcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHcCCceecCccccccccCCH
Confidence 3457788899999 44456799999999999999999999999999999998888899999998886643
No 416
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=22.58 E-value=63 Score=32.66 Aligned_cols=72 Identities=14% Similarity=0.040 Sum_probs=52.2
Q ss_pred HHHHHHHHHhhCCCCCCCHHH-----------HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcCccc
Q 010992 404 KRSIQELVNQIDPSERLDPDV-----------EDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL 472 (496)
Q Consensus 404 KrKLqELVrqIDPsesLDpDV-----------EELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I 472 (496)
..-|++|++.+|-...||.|. ++ -.+.+|+.|-.++.....+-+.-+.-.||+.||+-.|.. .++.+
T Consensus 148 ~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~-af~~~N~li~~~vs~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~ 225 (382)
T 1rq2_A 148 ENGIAALRESCDTLIVIPNDRLLQMGDAAVSLMD-AFRSADEVLLNGVQGITDLITTPGLINVDFADVKGIMSG-AGTAL 225 (382)
T ss_dssp HHHHHHHHHHCSEEEEEEHHHHTTSSCTTCCHHH-HHHHHHHHHHHHHHHHHHHHHSBCSSCCCHHHHHHHHTT-CEEEE
T ss_pred HHHHHHHHHhCCEEEEEechhHHHHhcCCCCHHH-HHHHHHHHHHHHHHHHHHHHccCCceeccHHHHHHhccC-CCeeE
Confidence 344778888887644444442 23 367778888888877777777778888999999999976 67888
Q ss_pred cCCCc
Q 010992 473 PGFSG 477 (496)
Q Consensus 473 PGFss 477 (496)
-|++.
T Consensus 226 ~g~g~ 230 (382)
T 1rq2_A 226 MGIGS 230 (382)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 77764
No 417
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=22.57 E-value=64 Score=29.50 Aligned_cols=54 Identities=15% Similarity=0.168 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCcchhh----HHHHHhhhcCccccCCCcccccccCCc
Q 010992 432 AEDFVESITMFGCSLAKHRKSDTLEAKD----ILVHLERNWNMTLPGFSGDEIKTFRKP 486 (496)
Q Consensus 432 ADDFVDsVvt~ACrLAKHRKSdTLEvKD----VQLhLERnWNI~IPGFssDEIr~~rk~ 486 (496)
.++||+||.----.-|+.-+.+ -|+.. |+-++++...-.+|.|...|.|-+...
T Consensus 122 ~~eF~~Dv~lIf~n~~~~~~~~-~e~~~ag~~l~~~f~~~l~~vfpwf~~~~~~~~~~~ 179 (183)
T 3lqh_A 122 VLEFSDDIVKIIQAAINSDGGQ-PEIKKANSMVKSFFIRQMERVFPWFSVKKSRFWEPN 179 (183)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCC-HHHHHHHHHHHHHHHHHHHHHCTTSCGGGCTTCC--
T ss_pred HHHHHHHHHHHHHHHhhccCCC-hhhhhhhhHHHHHHHHHHHHHCCCCCcccccccccc
Confidence 4688888765443334433333 34332 566788888999999999999876643
No 418
>1k3x_A Endonuclease VIII; hydrolase/DNA, hydrolase-DNA complex; HET: BRU PED; 1.25A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8 PDB: 1k3w_A* 1q39_A 2ea0_A* 2oq4_A* 1q3c_A 2opf_A* 1q3b_A*
Probab=22.55 E-value=84 Score=29.69 Aligned_cols=10 Identities=20% Similarity=0.255 Sum_probs=8.9
Q ss_pred CcccccCCCC
Q 010992 485 KPVRIVTDPI 494 (496)
Q Consensus 485 k~~~~~~d~~ 494 (496)
++|..||++|
T Consensus 235 ~pC~~CG~~I 244 (262)
T 1k3x_A 235 EPCERCGSII 244 (262)
T ss_dssp SBCTTTCCBC
T ss_pred CCCCCCCCEe
Confidence 4899999998
No 419
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=22.51 E-value=2.3e+02 Score=22.82 Aligned_cols=25 Identities=4% Similarity=-0.000 Sum_probs=11.7
Q ss_pred HHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 441 MFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 441 t~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
..++++.-..+...|+..++.-+|.
T Consensus 126 ~~~F~~~D~d~~G~I~~~E~~~~l~ 150 (191)
T 3khe_A 126 LAAFQQFDSDGSGKITNEELGRLFG 150 (191)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred HHHHHHHCCCCcCcCCHHHHHHHHc
Confidence 3344444334444555555554444
No 420
>1vmg_A Hypothetical protein SSO3215; 13816655, MAZG nucleotide pyrophosphohydrolase, structural G JCSG, protein structure initiative, PSI; HET: MSE; 1.46A {Sulfolobus solfataricus} SCOP: a.204.1.2
Probab=22.50 E-value=1.5e+02 Score=24.47 Aligned_cols=14 Identities=14% Similarity=0.249 Sum_probs=6.7
Q ss_pred HHHHHHHHhhhhcC
Q 010992 438 SITMFGCSLAKHRK 451 (496)
Q Consensus 438 sVvt~ACrLAKHRK 451 (496)
||+...+.||++-+
T Consensus 69 DvLf~lv~lA~~lg 82 (95)
T 1vmg_A 69 DVIAWTVSIANLEG 82 (95)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC
Confidence 34444455555444
No 421
>1abv_A Delta subunit of the F1F0-ATP synthase; ATP synthesis, F1-ATPase, spectroscopy; NMR {Escherichia coli} SCOP: a.70.1.1 PDB: 2a7u_B
Probab=22.42 E-value=1.6e+02 Score=24.03 Aligned_cols=33 Identities=18% Similarity=0.259 Sum_probs=19.7
Q ss_pred ccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHH
Q 010992 400 RILTKRSIQELVNQIDPSERLDPDVEDILVDIAE 433 (496)
Q Consensus 400 rILtKrKLqELVrqIDPsesLDpDVEELLLeIAD 433 (496)
..+++.+-.++|.+|-.+ .+++.+..+|.-|+|
T Consensus 49 P~i~~~~K~~~l~~~~~~-~~~~~~~nfl~ll~~ 81 (134)
T 1abv_A 49 GALAPETLAESFIAVCGE-QLDENGQNLIRVMAE 81 (134)
T ss_dssp CSSCHHHHHHHHHHHHCS-CCCHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHhc-cCCHHHHHHHHHHHH
Confidence 455666666666666432 566666666665555
No 422
>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1
Probab=22.29 E-value=37 Score=26.85 Aligned_cols=24 Identities=21% Similarity=0.369 Sum_probs=21.5
Q ss_pred CCCCcchhhHHHHHhhhcCccccC
Q 010992 451 KSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 451 KSdTLEvKDVQLhLERnWNI~IPG 474 (496)
|-+.|.+-+|...||+.||+.||-
T Consensus 38 G~DSL~~vel~~~le~~fgi~i~~ 61 (95)
T 1nq4_A 38 GYDSLALLNTVGRIERDYGVQLGD 61 (95)
T ss_dssp TCCSHHHHHHHHHHHHHTCCCSCT
T ss_pred CCCHHHHHHHHHHHHHHHCCccCH
Confidence 678889999999999999999984
No 423
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=22.13 E-value=66 Score=24.17 Aligned_cols=15 Identities=0% Similarity=0.082 Sum_probs=7.8
Q ss_pred cCCCCcchhhHHHHH
Q 010992 450 RKSDTLEAKDILVHL 464 (496)
Q Consensus 450 RKSdTLEvKDVQLhL 464 (496)
.+...|+..+..-.+
T Consensus 93 ~~dg~i~~~EF~~~~ 107 (109)
T 3fs7_A 93 DGDGKIGVEEFQSLV 107 (109)
T ss_dssp TCSSSBCHHHHHHHH
T ss_pred CCCCcCcHHHHHHHH
Confidence 344556666654333
No 424
>3zri_A CLPB protein, CLPV; chaperone, HSP100 proteins, AAA+ proteins, T6SS, secretion,; 1.80A {Vibrio cholerae} PDB: 3zrj_A
Probab=22.03 E-value=57 Score=28.90 Aligned_cols=35 Identities=17% Similarity=0.058 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 433 EDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 433 DDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
.+-+..++..|..+|+.++...|+.+.|.+.|=++
T Consensus 26 T~~a~~aL~~A~~~A~~~~h~~I~~EHLLlaLL~~ 60 (171)
T 3zri_A 26 NAQSKLALEQAASLCIERQHPEVTLEHYLDVLLDN 60 (171)
T ss_dssp CHHHHHHHHHHHHHHHHHTCSEECHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHc
Confidence 34455677888889999999988888888877554
No 425
>1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A*
Probab=21.97 E-value=75 Score=25.30 Aligned_cols=39 Identities=10% Similarity=0.021 Sum_probs=26.0
Q ss_pred HHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010992 405 RSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFG 443 (496)
Q Consensus 405 rKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~A 443 (496)
+.+.+.++.+.....++.+..+.|..+..++|++++..+
T Consensus 17 ~~~r~~~~~~~~~~~~~~~~~~~l~~il~~l~~Nai~h~ 55 (145)
T 1th8_A 17 SFARVTVAAFVAQLDPTMDELTEIKTVVSEAVTNAIIHG 55 (145)
T ss_dssp HHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccCcchhhHHHHHHHHHHHHHHHHHHh
Confidence 344555555555556777777788888888887776654
No 426
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=21.94 E-value=46 Score=23.89 Aligned_cols=34 Identities=15% Similarity=0.297 Sum_probs=20.6
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHH
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDPD-VEDILVD 430 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLe 430 (496)
+.+++..|++..|..+++.+. ..++++ +++++..
T Consensus 24 D~d~~G~i~~~el~~~l~~~g--~~~~~~~~~~~~~~ 58 (85)
T 2ktg_A 24 DKDNDNKLTAEELGTVMRALG--ANPTKQKISEIVKD 58 (85)
T ss_dssp CTTCCSEEEHHHHHHHHHTTS--SCCCHHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHhC--CCCCHHHHHHHHHH
Confidence 445666788888888888763 334444 4444433
No 427
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=21.93 E-value=2e+02 Score=22.31 Aligned_cols=19 Identities=16% Similarity=0.261 Sum_probs=13.0
Q ss_pred CCcCCccCCHHHHHHHHHh
Q 010992 395 DEFGNRILTKRSIQELVNQ 413 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrq 413 (496)
+.+++..|++..|..++++
T Consensus 14 D~d~dG~i~~~E~~~~l~~ 32 (166)
T 3akb_A 14 DQDGNGHIDRSDFSGAAKA 32 (166)
T ss_dssp CTTCSSEECHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHHHHHH
Confidence 4566677888888776544
No 428
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=21.91 E-value=87 Score=24.52 Aligned_cols=20 Identities=20% Similarity=0.499 Sum_probs=12.2
Q ss_pred CCcCCccCCHHHHHHHHHhh
Q 010992 395 DEFGNRILTKRSIQELVNQI 414 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI 414 (496)
+.+++..|++..|..+++.+
T Consensus 95 D~d~~G~I~~~el~~~l~~~ 114 (153)
T 2ovk_B 95 DEDGQGFIPEDYLKDLLENM 114 (153)
T ss_dssp CSSCSSCCCHHHHHHHHHHS
T ss_pred CCCCCCeEcHHHHHHHHHHc
Confidence 34555566666666666665
No 429
>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*
Probab=21.91 E-value=15 Score=27.89 Aligned_cols=23 Identities=13% Similarity=0.325 Sum_probs=14.3
Q ss_pred CCCCcchhhHHHHHhhhcCcccc
Q 010992 451 KSDTLEAKDILVHLERNWNMTLP 473 (496)
Q Consensus 451 KSdTLEvKDVQLhLERnWNI~IP 473 (496)
|-+.|.+-++...||+.||+.|+
T Consensus 51 G~DSl~~~~l~~~l~~~~g~~l~ 73 (99)
T 2liu_A 51 GLDSIVGVEWTTTINQTYNLNLK 73 (99)
T ss_dssp TCCHHHHHHHHHHHHHHHTCCCC
T ss_pred CccHHHHHHHHHHHHHHHCCCcC
Confidence 44555666666666666666654
No 430
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=21.90 E-value=1.2e+02 Score=25.93 Aligned_cols=42 Identities=19% Similarity=0.258 Sum_probs=32.4
Q ss_pred HHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010992 407 IQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAK 448 (496)
Q Consensus 407 LqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAK 448 (496)
|+.|+.+-++..-++.|+.+++.+=-++|.+.|-....+.|+
T Consensus 109 i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 109 ICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 555665556777899999998888788898888887777664
No 431
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=21.88 E-value=1.9e+02 Score=22.49 Aligned_cols=18 Identities=6% Similarity=0.121 Sum_probs=11.0
Q ss_pred hcCCCCcchhhHHHHHhh
Q 010992 449 HRKSDTLEAKDILVHLER 466 (496)
Q Consensus 449 HRKSdTLEvKDVQLhLER 466 (496)
.-+...|+..+..-.|.+
T Consensus 133 ~d~dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_C 133 EDLEGNVKYEDFVKKVMA 150 (156)
T ss_dssp CCTTSEEEHHHHHHHHHH
T ss_pred CCCCCcEeHHHHHHHHhc
Confidence 345556777777655554
No 432
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=21.82 E-value=2.7e+02 Score=24.47 Aligned_cols=66 Identities=11% Similarity=0.061 Sum_probs=38.9
Q ss_pred HHHHHHHHHhhCC--CCCCCHH-HHHHHHHHHH------------HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhc
Q 010992 404 KRSIQELVNQIDP--SERLDPD-VEDILVDIAE------------DFVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (496)
Q Consensus 404 KrKLqELVrqIDP--sesLDpD-VEELLLeIAD------------DFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (496)
+.+|.++.+.+|. +..|+.+ ...+|..+.+ +..++.+...++.+-.-+...|+..++.-.|.++-
T Consensus 164 ~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~~ 243 (256)
T 2jul_A 164 HEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDE 243 (256)
T ss_dssp HHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhCH
Confidence 4456666666664 3456654 4445544432 12455666666666666667788888877777643
Q ss_pred C
Q 010992 469 N 469 (496)
Q Consensus 469 N 469 (496)
+
T Consensus 244 ~ 244 (256)
T 2jul_A 244 N 244 (256)
T ss_dssp S
T ss_pred H
Confidence 3
No 433
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=21.79 E-value=1.6e+02 Score=26.60 Aligned_cols=37 Identities=14% Similarity=-0.040 Sum_probs=18.0
Q ss_pred CCCHHHHHHHHHHHHH-------HHHHHHHHHHHhhhhcCCCCc
Q 010992 419 RLDPDVEDILVDIAED-------FVESITMFGCSLAKHRKSDTL 455 (496)
Q Consensus 419 sLDpDVEELLLeIADD-------FVDsVvt~ACrLAKHRKSdTL 455 (496)
.++++...+|+.|+.- .+.+|...-+.+|+..+.+.+
T Consensus 287 ~l~~~~~~~l~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (387)
T 2v1u_A 287 TLPLHAKLVLLSIMMLEDGGRPASTGEIYERYKELTSTLGLEHV 330 (387)
T ss_dssp SSCHHHHHHHHHHHHHSSSSCCEEHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhcCCCCC
Confidence 3455555555555531 134444544555555554444
No 434
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=21.79 E-value=1.2e+02 Score=24.65 Aligned_cols=30 Identities=7% Similarity=0.071 Sum_probs=19.4
Q ss_pred HHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 438 SITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 438 sVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
+.+..+.++.-..+...|+..++.-.|.+.
T Consensus 99 ~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~ 128 (190)
T 1g8i_A 99 EKLRWAFKLYDLDNDGYITRNEMLDIVDAI 128 (190)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCCeECHHHHHHHHHHH
Confidence 344455555555666778888887777664
No 435
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=21.74 E-value=2.7e+02 Score=21.94 Aligned_cols=58 Identities=3% Similarity=-0.002 Sum_probs=35.2
Q ss_pred HHhhCCC--CCCCHH-HHHHHHHHHHH---------HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhhcC
Q 010992 411 VNQIDPS--ERLDPD-VEDILVDIAED---------FVESITMFGCSLAKHRKSDTLEAKDILVHLERNWN 469 (496)
Q Consensus 411 VrqIDPs--esLDpD-VEELLLeIADD---------FVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERnWN 469 (496)
++.+|.+ ..|+-+ ...++..+..+ ..+..+..+.++.-..+...|+..++.-.|++ +|
T Consensus 66 f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~-~g 135 (185)
T 2sas_A 66 KGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKN-FQ 135 (185)
T ss_dssp HHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTS-SC
T ss_pred HHhcCCCCCCeEcHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH-hC
Confidence 7777654 345543 33333333221 24456677777777777788999999877754 44
No 436
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=21.71 E-value=2.4e+02 Score=22.31 Aligned_cols=45 Identities=16% Similarity=0.422 Sum_probs=27.9
Q ss_pred cCC-ccCCHHHHHHHHHh-hCC--CCCCCH-HHHHHHHHH---------HHHHHHHHHH
Q 010992 397 FGN-RILTKRSIQELVNQ-IDP--SERLDP-DVEDILVDI---------AEDFVESITM 441 (496)
Q Consensus 397 ~~n-rILtKrKLqELVrq-IDP--sesLDp-DVEELLLeI---------ADDFVDsVvt 441 (496)
+++ ..|++..|..+++. +.. +..+++ +|++++.++ -+|||.-+..
T Consensus 24 dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 82 (98)
T 3n22_A 24 EGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLAL 82 (98)
T ss_dssp SSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred CCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 444 48999999999985 321 234454 466665554 3478765543
No 437
>1vq8_R 50S ribosomal protein L22P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.55.1.1 PDB: 1vq4_R* 1vq5_R* 1vq6_R* 1vq7_R* 1s72_R* 1vq9_R* 1vqk_R* 1vql_R* 1vqm_R* 1vqn_R* 1vqo_R* 1vqp_R* 1yhq_R* 1yi2_R* 1yij_R* 1yit_R* 1yjn_R* 1yjw_R* 2otj_R* 2otl_R* ...
Probab=21.56 E-value=1.6e+02 Score=26.47 Aligned_cols=52 Identities=6% Similarity=0.116 Sum_probs=36.7
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH------------------------------------HHHHHHHHHHHH
Q 010992 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIA------------------------------------EDFVESITMFGC 444 (496)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIA------------------------------------DDFVDsVvt~AC 444 (496)
=++-+|+.++++.|-+. .|+|+|.-|- -+||..++..|.
T Consensus 23 rvS~kk~r~va~~IrG~-----~v~~A~~~L~~V~~~k~~vPf~r~~~gvg~~~~~~~~~~gr~PkKaa~~ilklL~sA~ 97 (155)
T 1vq8_R 23 QMSFKHSKAIAREIKGK-----TAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAFLDLLENAV 97 (155)
T ss_dssp CSCHHHHHHHHHHHTTS-----BHHHHHHHHHHHHHTSSCEECSSSCTTCCBCTTCSSSSBEECCHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHcCC-----cHHHHHHHHHHHHhcceeccceeccCCCCccccccccccCCCcHHHHHHHHHHHHHHH
Confidence 35678999999999553 2344444333 379999999999
Q ss_pred HhhhhcCCCCcchhhH
Q 010992 445 SLAKHRKSDTLEAKDI 460 (496)
Q Consensus 445 rLAKHRKSdTLEvKDV 460 (496)
..|.|.+ ||+.++
T Consensus 98 aNAe~kg---ld~d~L 110 (155)
T 1vq8_R 98 GNADHQG---FDGEAM 110 (155)
T ss_dssp HHHHHTT---SCGGGS
T ss_pred HHHHHcC---CChhhe
Confidence 9999974 444443
No 438
>1j1v_A Chromosomal replication initiator protein DNAA, 5'-D(*CP*CP*TP*GP*TP*GP*GP*AP*TP*AP*AP*CP*A)-3'; protein-DNA complex; 2.10A {Escherichia coli} SCOP: a.4.12.2
Probab=21.53 E-value=10 Score=30.99 Aligned_cols=48 Identities=21% Similarity=0.366 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh-cCccccC
Q 010992 424 VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN-WNMTLPG 474 (496)
Q Consensus 424 VEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn-WNI~IPG 474 (496)
+++++-.+|+.|=-++-+ -+.|-|+.+.+.++.|.+||-|+ .|+.+|.
T Consensus 3 ~~~I~~~Va~~f~i~~~d---l~s~~R~~~i~~aRqiamyL~r~~t~~Sl~~ 51 (94)
T 1j1v_A 3 IDNIQKTVAEYYKIKVAD---LLSKRRSRSVARPRQMAMALAKELTNHSLPE 51 (94)
T ss_dssp HHHHHHHHHHHTTCCHHH---HHSCCCCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHhCCCHHH---HhCCCCCchhHHHHHHHHHHHHHHHCcCHHH
Confidence 566777778877333322 35788889999999999999887 5777764
No 439
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=21.51 E-value=74 Score=27.52 Aligned_cols=45 Identities=20% Similarity=0.246 Sum_probs=36.4
Q ss_pred HHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 010992 407 IQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRK 451 (496)
Q Consensus 407 LqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRK 451 (496)
|+.|+..-++..-++.|+.+++.+=-++|.+.|-....+.|+.|.
T Consensus 110 i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~~~ 154 (155)
T 1jat_A 110 IQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKKKP 154 (155)
T ss_dssp HHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEECC
T ss_pred HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcccCC
Confidence 556666556677899999999998888999999998888887653
No 440
>2y1q_A CLPC N-domain, negative regulator of genetic competence CLPC/MEC; transcription, proteolysis; 1.50A {Bacillus subtilis} PDB: 2y1r_A* 2k77_A
Probab=21.50 E-value=79 Score=25.90 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 435 FVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 435 FVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
-+..|+..|.++|+..+.+.|....|.+.|=++
T Consensus 83 ~~~~vL~~A~~~A~~~~~~~i~~ehlLlall~~ 115 (150)
T 2y1q_A 83 RAKKVIELSMDEARKLGHSYVGTEHILLGLIRE 115 (150)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCeecHHHHHHHHHhC
Confidence 355788999999999999999999999888543
No 441
>1us7_B HSP90 CO-chaperone CDC37; chaperone CO-chaperone regulation, ATP-binding, H shock,; 2.3A {Homo sapiens} SCOP: a.205.1.1 PDB: 2k5b_B 2w0g_A
Probab=21.36 E-value=2e+02 Score=28.16 Aligned_cols=41 Identities=15% Similarity=0.116 Sum_probs=30.4
Q ss_pred HHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010992 405 RSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAK 448 (496)
Q Consensus 405 rKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAK 448 (496)
.-+.-+.++| ..=|+.+.+++.+=.++|++.|..+|-.+.+
T Consensus 119 ~~v~~FF~ki---~~~~~~~~~~F~ddV~~~~~RIk~Ra~~~~~ 159 (265)
T 1us7_B 119 ACFRQFFTKI---KTADRQYMEGFNDELEAFKERVRGRAKLRIE 159 (265)
T ss_dssp GTHHHHHHHH---HTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHH---hccChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555 2237889999999999999999999886643
No 442
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=21.36 E-value=1.3e+02 Score=28.90 Aligned_cols=64 Identities=16% Similarity=0.288 Sum_probs=37.7
Q ss_pred HHHHHHHHHhh--CCCCCCC---H---HHHHHHHHHHHHHHHHH-------------HHHHHHhhhhcCC--CCcchhhH
Q 010992 404 KRSIQELVNQI--DPSERLD---P---DVEDILVDIAEDFVESI-------------TMFGCSLAKHRKS--DTLEAKDI 460 (496)
Q Consensus 404 KrKLqELVrqI--DPsesLD---p---DVEELLLeIADDFVDsV-------------vt~ACrLAKHRKS--dTLEvKDV 460 (496)
|.++++++..| ||-..=. . .+-|+-.+||-.-||-+ .+--|++-|-|+. +.|...||
T Consensus 41 R~~F~~mc~siGVDPlas~kg~ws~~lG~gdfy~eLavqIvEvC~~tr~~nGGli~L~el~~~~~r~Rg~~~~~IS~dDi 120 (234)
T 3cuq_A 41 RVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDL 120 (234)
T ss_dssp HHHHHHHHHHHTCCTTSCTTSHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSSEEEHHHHHHHHHHTTTTCCSSCCHHHH
T ss_pred HHHHHHHHHHcCCCcccCCcchhhhhcCcchHHHHHHHHHHHHHHHHHHhcCCeeEHHHHHHHHHHhcCCccCccCHHHH
Confidence 56788888887 4322110 0 13456556655555432 2334677777776 67788888
Q ss_pred HHHHhhh
Q 010992 461 LVHLERN 467 (496)
Q Consensus 461 QLhLERn 467 (496)
...+++-
T Consensus 121 ~rAik~L 127 (234)
T 3cuq_A 121 IRAIKKL 127 (234)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777663
No 443
>1f16_A Protein (apoptosis regulator BAX, membrane isoform alpha); helical protein; NMR {Homo sapiens} SCOP: f.1.4.1 PDB: 2k7w_A
Probab=21.29 E-value=28 Score=31.80 Aligned_cols=39 Identities=18% Similarity=0.463 Sum_probs=27.7
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH----------HHHHHHHhhhh
Q 010992 406 SIQELVNQIDPSERLDPDVEDILVDIAEDFVES----------ITMFGCSLAKH 449 (496)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLeIADDFVDs----------Vvt~ACrLAKH 449 (496)
+++.++++++. | .+.+.+.++||++.+| ++.|++.||++
T Consensus 75 ~~~~~~~~l~~----~-~a~~~F~~Va~elF~dG~inWGRIValf~F~g~La~~ 123 (192)
T 1f16_A 75 ELQRMIAAVDT----D-SPREVFFRVAADMFSDGNFNWGRVVALFYFASKLVLK 123 (192)
T ss_dssp HHHHHHTTSCC----S-CHHHHHHHHHHHHTSSSSCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCc----c-cHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 35555555542 2 4788899999998765 46788888876
No 444
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=21.20 E-value=1.3e+02 Score=26.73 Aligned_cols=33 Identities=6% Similarity=-0.039 Sum_probs=21.3
Q ss_pred HHHHhhCCCCCCCHH----HHHHHHHHHHHHHHHHHH
Q 010992 409 ELVNQIDPSERLDPD----VEDILVDIAEDFVESITM 441 (496)
Q Consensus 409 ELVrqIDPsesLDpD----VEELLLeIADDFVDsVvt 441 (496)
+-|+++.....|.+| +++-|.+|+|+||..|=.
T Consensus 65 d~lKKl~KdkeISEDe~kr~e~eIQKLTDkyIkkID~ 101 (121)
T 3lf9_A 65 NDLAALGKDKEVNWFDISQALWEIQKLTDVAVKKIDE 101 (121)
T ss_dssp HHHHHGGGCTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhcCCCCHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 334444333345554 578888999999988765
No 445
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=21.17 E-value=1.7e+02 Score=22.35 Aligned_cols=67 Identities=10% Similarity=0.200 Sum_probs=34.2
Q ss_pred CCcCCccCCHHHHHHHHHh----hCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 395 DEFGNRILTKRSIQELVNQ----IDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrq----IDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+.+++..|++..|..+++. +.....-+++..+ + ++.++.++...++.+-..+...|+..+..-++.+
T Consensus 30 D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~-~----~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 100 (103)
T 1snl_A 30 DINSDGVLDEQELEALFTKELEKVYDPKNEEDDMRE-M----EEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR 100 (103)
T ss_dssp CSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHH-T----THHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred cCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHH-H----HHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHhc
Confidence 4566778899999988886 3221111111111 1 1112223333334455556667888777555544
No 446
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=21.16 E-value=3.1e+02 Score=21.87 Aligned_cols=19 Identities=5% Similarity=0.128 Sum_probs=11.7
Q ss_pred CcCCccCCHHHHHHHHHhh
Q 010992 396 EFGNRILTKRSIQELVNQI 414 (496)
Q Consensus 396 e~~nrILtKrKLqELVrqI 414 (496)
.+++..|++..|..+++.+
T Consensus 83 ~d~~G~i~~~el~~~l~~~ 101 (167)
T 1gjy_A 83 SDRSGTVDPQELQKALTTM 101 (167)
T ss_dssp TTCCSEECHHHHHHHHHTT
T ss_pred CCCCCcCCHHHHHHHHHHc
Confidence 3455566666666666655
No 447
>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A
Probab=21.10 E-value=23 Score=26.95 Aligned_cols=24 Identities=25% Similarity=0.261 Sum_probs=19.3
Q ss_pred CCCCcchhhHHHHHhhhcCccccC
Q 010992 451 KSDTLEAKDILVHLERNWNMTLPG 474 (496)
Q Consensus 451 KSdTLEvKDVQLhLERnWNI~IPG 474 (496)
|-|.|.+-++.-.|++.||+.|+-
T Consensus 51 G~DSL~a~~l~~~l~~~~g~~l~~ 74 (95)
T 2ju1_A 51 GFDSLAAVRLRNLLNAATGLRLPS 74 (95)
T ss_dssp TCSSHHHHHHHHHHGGGTSSCCCT
T ss_pred CCcHHHHHHHHHHHHHHHCCCCCh
Confidence 556777788888999999998864
No 448
>3agt_A Hemerythrin-like domain protein DCRH; metal binding protein, oxygen binding, DIIRON, four-helix BU; 1.40A {Desulfovibrio vulgaris} PDB: 2awy_A 2avk_A 3agu_A 2awc_A
Probab=21.02 E-value=1.3e+02 Score=25.04 Aligned_cols=44 Identities=11% Similarity=0.058 Sum_probs=28.6
Q ss_pred HHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 010992 405 RSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHR 450 (496)
Q Consensus 405 rKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAKHR 450 (496)
++|.+|..+++.+. +..+++++..|.|=|++-|...-.++|++-
T Consensus 87 ~~v~~l~~~~~~g~--~~~~~~l~~~L~~Wl~~HI~~~D~~~~~~l 130 (136)
T 3agt_A 87 ETVLKWEKQLAAGD--PEVVMTTLRGLVDWLVNHIMKEDKKYEAYL 130 (136)
T ss_dssp HHHHHHHHHHTTCC--HHHHHHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHcCC--hHHHHHHHHHHHHHHHHHhHHHhHHHHHHH
Confidence 34666666665532 234566666777777788888777777754
No 449
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=20.99 E-value=1.2e+02 Score=31.12 Aligned_cols=74 Identities=9% Similarity=0.206 Sum_probs=47.5
Q ss_pred HHHHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHH--hhhcCccc--cCC--Cc
Q 010992 405 RSIQELVNQIDPS-ERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHL--ERNWNMTL--PGF--SG 477 (496)
Q Consensus 405 rKLqELVrqIDPs-esLDpDVEELLLeIADDFVDsVvt~ACrLAKHRKSdTLEvKDVQLhL--ERnWNI~I--PGF--ss 477 (496)
+.+.+|.+.++.. ...|..+-|+..-+++-|.+-=+.|+-.||..-..--+++.+|.-.+ ++.||..+ ||+ |+
T Consensus 203 ~~~~~ly~~~~~~~~~~~~~~AE~~Kl~eN~~ravnIa~~NEla~ice~~GiDv~eV~~a~~~d~rig~~~l~PG~G~GG 282 (444)
T 3vtf_A 203 SFLLDVYKAVDAPKLVMKPREAELVKYASNVFLALKISFANEVGLLAKRLGVDTYRVFEAVGLDKRIGRHYFGAGLGFGG 282 (444)
T ss_dssp HHHHHHTTTSCSCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTSCSTTCCCSSCCCT
T ss_pred HHHHHHHhccCCCEEEechhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCCCCCCCCCCCCCCCCC
Confidence 3455555555432 35688888999999999998877777766655544445666664444 45677544 555 55
Q ss_pred c
Q 010992 478 D 478 (496)
Q Consensus 478 D 478 (496)
-
T Consensus 283 ~ 283 (444)
T 3vtf_A 283 S 283 (444)
T ss_dssp T
T ss_pred c
Confidence 3
No 450
>1wer_A P120GAP; GTPase activation, RAS, signal transduction, growth regulation, cancer; 1.60A {Homo sapiens} SCOP: a.116.1.2 PDB: 1wq1_G*
Probab=20.89 E-value=90 Score=30.07 Aligned_cols=41 Identities=29% Similarity=0.453 Sum_probs=25.7
Q ss_pred HHHHHHHHHhh---CCCCCCCH-------HHH---HHHHHHHHHHHHHHHHHHH
Q 010992 404 KRSIQELVNQI---DPSERLDP-------DVE---DILVDIAEDFVESITMFGC 444 (496)
Q Consensus 404 KrKLqELVrqI---DPsesLDp-------DVE---ELLLeIADDFVDsVvt~AC 444 (496)
|..|.++|++| +.+..+|+ +++ +.|.+++++|++.|+....
T Consensus 98 ~~~L~~~i~~i~~~~~~~EiDP~ki~~~~~~~~n~~~L~~~~~~~~~~I~~s~~ 151 (334)
T 1wer_A 98 HHALKDSILKIMESKQSCELSPSKLEKNEDVNTNLTHLLNILSELVEKIFMASE 151 (334)
T ss_dssp HHHHHHHHHHHHHCCCCCCCCGGGTCSSCCHHHHHHHHHHHHHHHHHHHHTTGG
T ss_pred HHHHHHHHHHHHcCCCCeeeCHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666655 22344444 333 5788999999999886443
No 451
>2jer_A Agmatine deiminase; hydrolase, tetramer, AGDI, 5- fold pseudosymmetric structure, agmatine degradation pathway, covalent amidino adduct; HET: AGT; 1.65A {Enterococcus faecalis} SCOP: d.126.1.6
Probab=20.79 E-value=26 Score=35.59 Aligned_cols=40 Identities=28% Similarity=0.337 Sum_probs=33.6
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhhcC----cccc-CCCccc
Q 010992 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWN----MTLP-GFSGDE 479 (496)
Q Consensus 439 Vvt~ACrLAKHRKSdTLEvKDVQLhLERnWN----I~IP-GFssDE 479 (496)
+++..|.|.++|+-. |.-.+|.-.|++.+| |||| |+..||
T Consensus 170 ltTe~clLn~nRNP~-lsk~eiE~~Lk~~LGv~kvIWL~~Gl~~Dd 214 (389)
T 2jer_A 170 LTTEMCLLSEGRNPQ-LSKEAIEQKLCDYLNVEKVLWLGDGIDPEE 214 (389)
T ss_dssp EEEHHHHTSTTTCTT-SCHHHHHHHHHHHHTCSEEEEECCCSCTTT
T ss_pred EEEeeeecCCCCCCC-cCHHHHHHHHHHHcCCCEEEEcCCcCCCCC
Confidence 567899999999987 788899999999888 6788 776665
No 452
>2fu2_A Hypothetical protein SPY2152; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.15A {Streptococcus pyogenes}
Probab=20.75 E-value=57 Score=27.05 Aligned_cols=35 Identities=9% Similarity=0.284 Sum_probs=28.4
Q ss_pred HHHHHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHH
Q 010992 404 KRSIQELVNQI--DPSERLDPDVEDILVDIAEDFVES 438 (496)
Q Consensus 404 KrKLqELVrqI--DPsesLDpDVEELLLeIADDFVDs 438 (496)
++.|.+++.++ |+..+.|++..++|++.|++-...
T Consensus 4 ~~~L~~~i~~ay~d~ev~~~~~L~~~il~aa~~L~k~ 40 (102)
T 2fu2_A 4 EKEILDALSKVYSEQVIQADDYFRQAIFELASQLEKE 40 (102)
T ss_dssp HHHHHHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCChhhccCHHHHHHHHHHHHHhhcC
Confidence 45677777777 678899999999999999988665
No 453
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=20.73 E-value=1.3e+02 Score=25.29 Aligned_cols=33 Identities=21% Similarity=0.541 Sum_probs=19.3
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCH-HHHHHHH
Q 010992 395 DEFGNRILTKRSIQELVNQIDPSERLDP-DVEDILV 429 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDp-DVEELLL 429 (496)
+.+++..|++..|..+++.++. .+++ +|+++|.
T Consensus 94 D~d~~G~I~~~el~~~l~~~g~--~~~~~ei~~l~~ 127 (176)
T 2lhi_A 94 DKNGDGLISAAELKHVLTSIGE--KLTDAEVDDMLR 127 (176)
T ss_dssp CSSCSSSBCHHHHHHHHHTTTC--CCCHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHcCc--ccchHHHHHHHH
Confidence 4566667777777777776532 3333 3444443
No 454
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=20.70 E-value=55 Score=30.78 Aligned_cols=28 Identities=11% Similarity=0.062 Sum_probs=16.1
Q ss_pred CCCCHHHHHHHHHHHHH------HHHHHHHHHHH
Q 010992 418 ERLDPDVEDILVDIAED------FVESITMFGCS 445 (496)
Q Consensus 418 esLDpDVEELLLeIADD------FVDsVvt~ACr 445 (496)
..|++++.+.|++.+.+ .+.++++.+|.
T Consensus 304 ~~~~~~a~~~l~~~~~~~~~~~R~L~~~le~~~~ 337 (376)
T 1um8_A 304 LIFEEEAIKEIAQLALERKTGARGLRAIIEDFCL 337 (376)
T ss_dssp EEECHHHHHHHHHHHHHTTCTGGGHHHHHHHHHH
T ss_pred EEECHHHHHHHHHHhcccccCcHHHHHHHHHHHH
Confidence 45777777777766543 34455555444
No 455
>2pfx_A Uncharacterized peroxidase-related protein; YP_614459.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE PG4; 1.70A {Silicibacter SP} SCOP: a.152.1.3
Probab=20.57 E-value=1.1e+02 Score=26.45 Aligned_cols=68 Identities=12% Similarity=0.002 Sum_probs=37.6
Q ss_pred CHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH---HHHHHHHhhhhcCCCCcchhhHHHH--HhhhcCccc
Q 010992 403 TKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVES---ITMFGCSLAKHRKSDTLEAKDILVH--LERNWNMTL 472 (496)
Q Consensus 403 tKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDs---Vvt~ACrLAKHRKSdTLEvKDVQLh--LERnWNI~I 472 (496)
+..+|..|.. ++.+..-++-|.+++++||+++.+ |......-+|..|-+.-++-||.+. +-.-||+..
T Consensus 103 ~~~~i~~l~~--~~~~~~~~~~e~a~l~~a~~lt~~~~~v~d~~~~~l~~~G~s~~ei~el~~~ia~~~~~nr~~ 175 (191)
T 2pfx_A 103 DPQLGEMLVM--NYRVAPLDARQRVMLDFAAKMTRASAEIEEADREVLRSHGFNDRDIWDIANVTGFFNMTNRVA 175 (191)
T ss_dssp CHHHHHHHHH--CGGGSCCCHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHH--hhhcCCCCHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555543 222224456788899999888764 3444444445554555577777443 344455433
No 456
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=20.55 E-value=86 Score=29.76 Aligned_cols=27 Identities=26% Similarity=0.281 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010992 422 PDVEDILVDIAEDFVESITMFGCSLAK 448 (496)
Q Consensus 422 pDVEELLLeIADDFVDsVvt~ACrLAK 448 (496)
+++.+.|++-+++|++.....--++|+
T Consensus 75 ~~~k~~l~~~~~~~~~~~~~~~~~Ia~ 101 (276)
T 1vb5_A 75 TNRRDILKSRALEFLRRMEEAKRELAS 101 (276)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677889999999887766555554
No 457
>3g33_B CCND3 protein; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=20.46 E-value=1.4e+02 Score=28.45 Aligned_cols=59 Identities=12% Similarity=0.286 Sum_probs=41.0
Q ss_pred HHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH---------HHHHHHHh--hhhcCCCCcchhhHHH
Q 010992 404 KRSIQELVNQIDPSERLDPDVEDILVDIAEDFVES---------ITMFGCSL--AKHRKSDTLEAKDILV 462 (496)
Q Consensus 404 KrKLqELVrqIDPsesLDpDVEELLLeIADDFVDs---------Vvt~ACrL--AKHRKSdTLEvKDVQL 462 (496)
|+.|-+.+-+|.-..+|..++.-+=..|.|.|+.. ++..+|.+ ||......++++|+..
T Consensus 71 R~~lvdwl~ev~~~~~l~~~t~~lAv~~lDRfls~~~v~~~~lqLv~~tcL~lAsK~eE~~p~~~~~l~~ 140 (306)
T 3g33_B 71 RKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCI 140 (306)
T ss_dssp HHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHHCCCCGGGHHHHHHHHHHHHHHHHCSSCCCTTHHHH
T ss_pred HHHHHHHHHHHHHHhCCcHhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhccCCCCCHHHHHH
Confidence 77788888888888899999998888999999876 33333332 3444444456666544
No 458
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=20.46 E-value=1.2e+02 Score=27.71 Aligned_cols=43 Identities=23% Similarity=0.441 Sum_probs=35.4
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010992 406 SIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAK 448 (496)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACrLAK 448 (496)
.|+.|+..-++..-++.|+.+++.+=-++|...|-....+.|+
T Consensus 150 sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya~ 192 (193)
T 2f4z_A 150 SIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFAK 192 (193)
T ss_dssp HHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 3566777667888899999999998888999998888877775
No 459
>3fh2_A Probable ATP-dependent protease (heat shock prote; struct genomics, PSI2, MCSG, protein structure initiative; 1.60A {Corynebacterium glutamicum}
Probab=20.42 E-value=85 Score=26.08 Aligned_cols=33 Identities=12% Similarity=0.170 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhh
Q 010992 435 FVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (496)
Q Consensus 435 FVDsVvt~ACrLAKHRKSdTLEvKDVQLhLERn 467 (496)
-+..|+..|..+|+.++.+.|+.+.|.+.|=++
T Consensus 10 ~~~~~l~~A~~~A~~~~~~~i~~eHLLlaLl~~ 42 (146)
T 3fh2_A 10 RARRVIVLAQEEARMLNHNYIGTEHILLGLIHE 42 (146)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCchHHHHHHHHHhC
Confidence 345677888889999999999999988887654
No 460
>1khy_A CLPB protein; alpha helix, chaperone; 1.95A {Escherichia coli} SCOP: a.174.1.1
Probab=20.41 E-value=80 Score=25.75 Aligned_cols=30 Identities=10% Similarity=0.112 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 010992 436 VESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (496)
Q Consensus 436 VDsVvt~ACrLAKHRKSdTLEvKDVQLhLE 465 (496)
+..|+..|.++|+..+.+.|.+.+|.+.|-
T Consensus 87 ~~~vl~~A~~~a~~~~~~~i~~ehlLlall 116 (148)
T 1khy_A 87 LVRVLNLCDKLAQKRGDNFISSELFVLAAL 116 (148)
T ss_dssp HHHHHHHHHHHHHHHTCSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCeecHHHHHHHHH
Confidence 567889999999999999999999988875
No 461
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=20.34 E-value=2.4e+02 Score=23.30 Aligned_cols=31 Identities=13% Similarity=0.069 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 436 VESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 436 VDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
.+..+...++.+-..+...|+..+..-.|.+
T Consensus 146 ~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~ 176 (204)
T 1jba_A 146 PEEVVDRIFLLVDENGDGQLSLNEFVEGARR 176 (204)
T ss_dssp HHHHHHHHHHHHCCSCCSCBCHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCCCeEcHHHHHHHHHc
Confidence 3445555666665566667888877666654
No 462
>2hsb_A Hypothetical UPF0332 protein AF0298; DUF103 family, structural genomics, joint center for structu genomics, JCSG; HET: MSE PG4; 1.95A {Archaeoglobus fulgidus}
Probab=20.32 E-value=2.1e+02 Score=22.89 Aligned_cols=24 Identities=21% Similarity=0.234 Sum_probs=16.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHH
Q 010992 418 ERLDPDVEDILVDIAEDFVESITM 441 (496)
Q Consensus 418 esLDpDVEELLLeIADDFVDsVvt 441 (496)
..++.+--+-.++.|++||+-|-.
T Consensus 97 ~~~~~~~a~~al~~A~~~i~~v~~ 120 (126)
T 2hsb_A 97 KEVSKDLAIKILKDAEIFVQKAKN 120 (126)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 456666666677788888877654
No 463
>1x9z_A DNA mismatch repair protein MUTL; alpha-beta fold, dimer, replication, signaling protein; HET: DNA MSE; 2.10A {Escherichia coli} SCOP: d.292.1.1
Probab=20.26 E-value=1.2e+02 Score=26.71 Aligned_cols=42 Identities=5% Similarity=0.076 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHH--------HHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 423 DVEDILVDIAEDF--------VESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 423 DVEELLLeIADDF--------VDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
+++++|.+|.|++ -+-+...||+. -|..+.|....+.--|++
T Consensus 107 ~~~~li~~ll~~l~~~~~~~~~~~~~~~AC~~--ik~g~~Ls~~em~~Ll~~ 156 (188)
T 1x9z_A 107 NLQILIPELIGYLAKQSVFEPGNIAQWIARNL--MSEHAQWSMAQAITLLAD 156 (188)
T ss_dssp CHHHHHHHHHHHHTTCSSCCHHHHHHHHHHTT--SCCCCSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCcchHHHHHHHHHHhh--CccCCCCCHHHHHHHHHH
Confidence 4556666666655 22355678887 345566766666444443
No 464
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=20.24 E-value=1.3e+02 Score=29.97 Aligned_cols=40 Identities=15% Similarity=0.148 Sum_probs=25.1
Q ss_pred HHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-hhh
Q 010992 407 IQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCS-LAK 448 (496)
Q Consensus 407 LqELVrqIDPsesLDpDVEELLLeIADDFVDsVvt~ACr-LAK 448 (496)
++.+++.|.. +.=.+++.+.|++-+++|+++.+. +|+ +++
T Consensus 98 ~~~~~~~i~~-~~~~~~~k~~l~~~~~~~~~e~~~-~~~~I~~ 138 (351)
T 1t5o_A 98 IERALNAALK-GESVEEVKELALREAEKLAEEDVE-RNRKMGE 138 (351)
T ss_dssp HHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 3444444432 222345778899999999999886 454 444
No 465
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=20.19 E-value=3.7e+02 Score=23.12 Aligned_cols=62 Identities=6% Similarity=0.029 Sum_probs=33.8
Q ss_pred HHHHHHHHhhCCC--CCCCHH-HHHHHHHHHH---------HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 010992 405 RSIQELVNQIDPS--ERLDPD-VEDILVDIAE---------DFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (496)
Q Consensus 405 rKLqELVrqIDPs--esLDpD-VEELLLeIAD---------DFVDsVvt~ACrLAKHRKSdTLEvKDVQLhLER 466 (496)
.+|..+.+.+|.+ ..|+.+ +.++|..+.. +-|+.++...++.+-..+...|+..+..-.+.+
T Consensus 129 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 202 (214)
T 2l4h_A 129 IKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 202 (214)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 3555666655542 345543 4444444332 334455555556665566667777777665554
No 466
>1i4j_A 50S ribosomal protein L22; mutant, erythromycin resistance, RNA binding, RNA binding protein; 1.80A {Thermus thermophilus} SCOP: d.55.1.1 PDB: 1bxe_A 1giy_S 1ml5_s* 1vsa_Q 1vsp_Q 1yl3_S 2b66_W 2b9n_W 2b9p_W 2hgj_V 2hgq_V 2hgu_V 2j01_W 2j03_W 2jl6_W 2jl8_W 2v47_W 2v49_W 2wdi_W 2wdj_W ...
Probab=20.15 E-value=2e+02 Score=24.17 Aligned_cols=52 Identities=13% Similarity=0.167 Sum_probs=37.0
Q ss_pred CCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH------HHHHHHHHHHHHHhhhhcCCCCcchhhH
Q 010992 402 LTKRSIQELVNQIDPSERLDPDVEDILVDIA------EDFVESITMFGCSLAKHRKSDTLEAKDI 460 (496)
Q Consensus 402 LtKrKLqELVrqIDPsesLDpDVEELLLeIA------DDFVDsVvt~ACrLAKHRKSdTLEvKDV 460 (496)
++-+|+.++++.|-+. .|+|+|..|- -+||..|+..|...|.|.. -||..++
T Consensus 12 ~SpkK~r~va~~IrG~-----~v~~Al~~L~~~pkkaa~~v~klL~sA~aNAe~n~--gld~d~L 69 (110)
T 1i4j_A 12 ISPRKVRLVVDLIRGK-----SLEEARNILRYTNKRGAYFVAKVLESAAANAVNNH--DALEDRL 69 (110)
T ss_dssp SCHHHHHHHHHHHTTC-----BHHHHHHHHHHCCCTTHHHHHHHHHHHHHHHHHTS--CCCGGGE
T ss_pred CCHHHHHHHHHHHcCC-----cHHHHHHHHHHCCHHHHHHHHHHHHHHHHhHHHhc--CCChhhe
Confidence 5678899999999653 3555555443 4899999999999999852 2444443
No 467
>1ais_B TFB TFIIB, protein (transcription initiation factor IIB); hyperthermophIle, ribosome binding, complex (ribosome binding/ DNA); HET: DNA 5IU; 2.10A {Pyrococcus woesei} SCOP: a.74.1.2 a.74.1.2 PDB: 1d3u_B*
Probab=20.09 E-value=3.2e+02 Score=23.59 Aligned_cols=20 Identities=15% Similarity=0.252 Sum_probs=15.4
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 010992 419 RLDPDVEDILVDIAEDFVES 438 (496)
Q Consensus 419 sLDpDVEELLLeIADDFVDs 438 (496)
.++++|++.-.+|++++.++
T Consensus 120 ~l~~~v~~~A~~i~~~~~~~ 139 (200)
T 1ais_B 120 GLSEKVRRRAIEILDEAYKR 139 (200)
T ss_dssp TCCHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHc
Confidence 36788888888888888764
No 468
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=20.05 E-value=1.5e+02 Score=24.18 Aligned_cols=20 Identities=20% Similarity=0.336 Sum_probs=12.8
Q ss_pred CCcCCccCCHHHHHHHHHhh
Q 010992 395 DEFGNRILTKRSIQELVNQI 414 (496)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI 414 (496)
+.+++..|++..|..+++.+
T Consensus 58 D~d~dG~I~~~El~~~l~~~ 77 (147)
T 1wy9_A 58 DLNGNGDIDIMSLKRMLEKL 77 (147)
T ss_dssp CCCTTSSEEHHHHHHHHHHT
T ss_pred CCCCCCcCcHHHHHHHHHHh
Confidence 44555667777777777665
No 469
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=20.03 E-value=94 Score=28.71 Aligned_cols=18 Identities=11% Similarity=0.209 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010992 424 VEDILVDIAEDFVESITM 441 (496)
Q Consensus 424 VEELLLeIADDFVDsVvt 441 (496)
+|+-|-+|.|+||..|=.
T Consensus 156 ~e~~iQkltd~~i~~id~ 173 (185)
T 1is1_A 156 AQEEIQKLTDVAVKKIDE 173 (185)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 677888889999887744
No 470
>3r8s_S 50S ribosomal protein L22; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_Q 1p86_Q 1vs8_S 1vs6_S 2aw4_S 2awb_S 1vt2_S 2i2v_S 2j28_S 2i2t_S* 2qao_S* 2qba_S* 2qbc_S* 2qbe_S 2qbg_S 2qbi_S* 2qbk_S* 2qov_S 2qox_S 2qoz_S* ...
Probab=20.02 E-value=2e+02 Score=24.21 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=33.6
Q ss_pred CCHHHHHHHHHhhCCCCCCCHHHHHHHHHH------HHHHHHHHHHHHHHhhhhc
Q 010992 402 LTKRSIQELVNQIDPSERLDPDVEDILVDI------AEDFVESITMFGCSLAKHR 450 (496)
Q Consensus 402 LtKrKLqELVrqIDPsesLDpDVEELLLeI------ADDFVDsVvt~ACrLAKHR 450 (496)
++-+|+.++++.|-+. .|+|+|..| |-+||..|+..|...|.|.
T Consensus 12 ~S~kK~r~va~~IrG~-----~v~~Al~~L~f~pkkaa~~v~k~L~sA~aNAe~~ 61 (110)
T 3r8s_S 12 SSAQKVRLVADLIRGK-----KVSQALDILTYTNKKAAVLVKKVLESAIANAEHN 61 (110)
T ss_dssp SCHHHHHHHHHHHTTC-----BHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCC-----cHHHHHHHHhhCCHHHHHHHHHHHHHHHHhHHHh
Confidence 5678899999999542 344555444 5589999999999999986
Done!