BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010994
(496 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359483464|ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Vitis vinifera]
Length = 506
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/476 (70%), Positives = 403/476 (84%)
Query: 15 NAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRK 74
N + +R YYT+R K +LY+ ISPLG+P T + PELDNWV+NGNKV V ELQRII DLRK
Sbjct: 24 NPISNRTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRK 83
Query: 75 RKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTY 134
RKRFSQALE+S+WM++KGIC F+P +HAVQLDLIGRV GFLSAESYF++L++ +KT +TY
Sbjct: 84 RKRFSQALEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTY 143
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
GALLNCYVRQRQTDK+LSH +KMKEMG A S LTYNDIMCLY+ GQ+EKVPDVLTEMK
Sbjct: 144 GALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQ 203
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
N++PDNFSYRICINSYGA+SD++GME +L+EME QPHIV+DW+TYA AA+FYIKA L D
Sbjct: 204 SNVYPDNFSYRICINSYGAQSDIQGMENVLKEMERQPHIVMDWNTYAVAANFYIKAGLPD 263
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITML 314
KA + LKK+EERL+++DG+GYN LISLYASLGNK+EVLRLW LEK+ACKR INRDYITML
Sbjct: 264 KAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITML 323
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
E+L++LGE EEAEKVL+EWE SGN YD R+PN VIIGY GL + AEA+L++L+EKGK
Sbjct: 324 ESLVRLGELEEAEKVLREWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKI 383
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
TTPNSW VA+GY D G+ E+ +CMKAA+S++V KG KP+ +VI ILS LGD+G V+
Sbjct: 384 TTPNSWGTVASGYMDEGEMEKAVECMKAAISLHVNNKGRKPNSRVIAGILSWLGDKGRVE 443
Query: 435 DVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
DVEAFV +LR VIPMNR+MYH I ANIR GK VD LL SMKAD I EDEETK+IL
Sbjct: 444 DVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVDGLLASMKADKIVEDEETKKIL 499
>gi|147807263|emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/476 (70%), Positives = 402/476 (84%)
Query: 15 NAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRK 74
N + +R YYT+R K +LY+ ISPLG+P T + PELDNWV+NGNKV V ELQRII DLRK
Sbjct: 24 NPISNRTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRK 83
Query: 75 RKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTY 134
RKRFSQALE+S+WM++KGIC F+P +HAVQLDLIGRV GFLSAESYF++L++ +KT +TY
Sbjct: 84 RKRFSQALEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTY 143
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
GALLNCYVRQRQTDK+LSH +KMKEMG A S LTYNDIMCLY+ GQ+EKVPDVLTEMK
Sbjct: 144 GALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQ 203
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
+++PDNFSYRICINSY A+SD++GME +L+EME QPHIV+DW+TYA AA+FYIKA L D
Sbjct: 204 SHVYPDNFSYRICINSYAAQSDIQGMEKVLKEMERQPHIVMDWNTYAVAANFYIKAGLPD 263
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITML 314
KA + LKK+EERL+++DG+GYN LISLYASLGNK+EVLRLW LEK+ACKR INRDYITML
Sbjct: 264 KAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITML 323
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
E+L++LGE EEAEKVL+EWE SGN YD R+PN VIIGY GL + AEA+L++L+EKGK
Sbjct: 324 ESLVRLGELEEAEKVLREWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKI 383
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
TTP+SW VA+GY D G+ E+ +CMKAA+S++V KG KP+ +VI ILS LGD+G V+
Sbjct: 384 TTPDSWGTVASGYMDEGEMEKAVECMKAAISLHVNNKGRKPNSRVIAGILSWLGDKGRVE 443
Query: 435 DVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
DVEAFV +LR VIPMNR+MYH I ANIR GK VD LL SMKAD I EDEETK+IL
Sbjct: 444 DVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVDGLLASMKADKIVEDEETKKIL 499
>gi|224077120|ref|XP_002305141.1| predicted protein [Populus trichocarpa]
gi|222848105|gb|EEE85652.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/490 (67%), Positives = 398/490 (81%), Gaps = 1/490 (0%)
Query: 1 MIPKLKLSTNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKV 60
M KL T Q N + +R YYTN+ NK TLYS ISPLG+ + +EPELD+WV++GNKV
Sbjct: 1 MNTKLISKTLIQNQNTIITRSYYTNKANKATLYSKISPLGSTPS-LEPELDSWVRSGNKV 59
Query: 61 RVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY 120
RV ELQRII DLRKRKRFS AL+VS+WM++K IC+F+P +HAVQLDLIGRVHGF+SAE+Y
Sbjct: 60 RVAELQRIIHDLRKRKRFSHALQVSEWMHKKDICIFSPSEHAVQLDLIGRVHGFVSAENY 119
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
F+NL+D +K +TYGALLNCYVRQR+TDK++ H +KMKEMG A S+LTYNDIMCLY+ G
Sbjct: 120 FNNLRDQDKNEKTYGALLNCYVRQRETDKSILHLQKMKEMGFAKSSLTYNDIMCLYTNVG 179
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
Q+EKVP VL EMK N+ PDNFSYR+CINS+GAR DLEGME IL EME QP IV+DW+TY
Sbjct: 180 QHEKVPQVLNEMKENNVLPDNFSYRLCINSFGARDDLEGMEKILNEMEHQPDIVMDWNTY 239
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
A AA+FYI +L DKA D LKK+E RL++KDG GYN LISLYA LGNK+EVLRLWDLEK+
Sbjct: 240 AVAANFYIIGDLTDKAIDTLKKSEARLDKKDGTGYNHLISLYAKLGNKTEVLRLWDLEKS 299
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
AC+R+IN+DYI M+E+L+KL E EEAEK+LKEWE SGN YD R+PN +IIGY GL +
Sbjct: 300 ACERHINKDYIIMMESLLKLSEFEEAEKMLKEWESSGNFYDVRVPNTLIIGYSRKGLCEK 359
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
A+A+LE+L EKGK T PNSW +VAAG+FD + + F CMKAAL +YVE KGWKP+ +VI
Sbjct: 360 AKALLENLTEKGKMTLPNSWGIVAAGFFDKSEVAKAFSCMKAALCLYVENKGWKPNQRVI 419
Query: 421 TSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGI 480
ILS LGDEGS +D EAFV++L+TVIP+NR+MYHA +KANIR GK V LLD MK I
Sbjct: 420 NGILSWLGDEGSAEDAEAFVSSLKTVIPVNREMYHAVLKANIRAGKEVHRLLDGMKTYNI 479
Query: 481 DEDEETKEIL 490
EDEETK+IL
Sbjct: 480 KEDEETKKIL 489
>gi|255556039|ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541717|gb|EEF43265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 485
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/474 (68%), Positives = 393/474 (82%)
Query: 17 VFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRK 76
+ SR+YY NR K TLYS ISPLG+P T + PELDNWV++GNKVRVGELQRIIRDLRKR
Sbjct: 1 MISRYYYANRTKKVTLYSKISPLGDPNTSLVPELDNWVQDGNKVRVGELQRIIRDLRKRN 60
Query: 77 RFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGA 136
RF+QALEVS+WMN+KGIC+F+ +HAVQLDLIG+V GFLSAE+YF+NL D +KT +TYGA
Sbjct: 61 RFTQALEVSEWMNKKGICIFSSTEHAVQLDLIGKVRGFLSAENYFNNLMDHDKTDKTYGA 120
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LLNCYVRQRQTD+++SH++KMKEMG+A S L YNDIMCLY G YEKV VLTEMK
Sbjct: 121 LLNCYVRQRQTDRSISHWQKMKEMGLASSPLAYNDIMCLYINLGLYEKVLHVLTEMKENK 180
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
I PDNFSYRICINSYGARSD++GME +L EME + +DW+TYA A+FYIKA L DKA
Sbjct: 181 ISPDNFSYRICINSYGARSDIQGMEKVLNEMECRLGNAMDWNTYAVVANFYIKAGLADKA 240
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
D L+K+EE+L++KDGIGYN LISLYA+LG KSEVLR+WDL+K+ CKR INRD++TMLE+
Sbjct: 241 VDALRKSEEKLDKKDGIGYNHLISLYATLGIKSEVLRIWDLQKSVCKRRINRDFVTMLES 300
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
L+KLG+ EEAEKVLKEWE SGN YD RIPN V++GY NGL + AEA LE L+EKG+ATT
Sbjct: 301 LVKLGDLEEAEKVLKEWESSGNFYDVRIPNIVVVGYSKNGLHEKAEASLEALMEKGRATT 360
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV 436
PNSWA++A+GY + G+ + F+CMKAA S+ VE KGWKP+P+V+ IL LGDEGS +DV
Sbjct: 361 PNSWAMIASGYLEKGEKAKAFECMKAAFSLNVEKKGWKPNPRVVMDILIWLGDEGSPEDV 420
Query: 437 EAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
EAFVA+L IP+NRQ+YHA +KA IR+G+ E+LD MK D IDEDEETKEIL
Sbjct: 421 EAFVASLSVAIPLNRQIYHALLKAKIRSGRDAHEILDRMKTDKIDEDEETKEIL 474
>gi|224125490|ref|XP_002329818.1| predicted protein [Populus trichocarpa]
gi|222870880|gb|EEF08011.1| predicted protein [Populus trichocarpa]
Length = 494
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/490 (64%), Positives = 388/490 (79%), Gaps = 1/490 (0%)
Query: 1 MIPKLKLSTNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKV 60
M KL T Q NA+ SR YYTN+ NK TLYS +SPLG+ + +EPELD+W++NG KV
Sbjct: 1 MNTKLISKTLNQNQNAIISRSYYTNKTNKATLYSKLSPLGSTPS-LEPELDSWIQNGKKV 59
Query: 61 RVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY 120
+V ELQRII D R RKRF+ AL+VS+WMN+KGIC+F+P HAVQLDLIGRVHGF+SAE+Y
Sbjct: 60 KVAELQRIIHDFRMRKRFTHALQVSEWMNKKGICIFSPSQHAVQLDLIGRVHGFVSAENY 119
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
F+NL+D +K +TYGALLNCYV++R+TDK++SH +KMKEMG A S+L+YNDIMCLY+ G
Sbjct: 120 FNNLRDQDKNEKTYGALLNCYVQKRETDKSISHLQKMKEMGFAKSSLSYNDIMCLYTNVG 179
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
Q+EKVP VL EMK N+ PDNFSYR+C+NSYGAR DLEGME +L EME QP IV+DW++Y
Sbjct: 180 QHEKVPQVLNEMKENNVSPDNFSYRLCMNSYGARGDLEGMEKMLNEMEHQPDIVVDWNSY 239
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
A AA YIK L DKA D LKK+E RL++KDG GYN LISLYA+LG K+EVLRLWDLEK+
Sbjct: 240 AVAASSYIKGGLTDKAIDSLKKSETRLDKKDGTGYNHLISLYATLGEKTEVLRLWDLEKS 299
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
C+R IN+DYI ++ +L+KL E EE EKVLKEWE SGN YD R+PN +IIGY GL +
Sbjct: 300 TCERPINKDYINIMASLVKLDEFEEVEKVLKEWEASGNFYDVRVPNTLIIGYSGKGLYEK 359
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
A+A+LE+L EKGKAT PN W VAAG+FD + + F CMKAAL +Y E K WKP+ KVI
Sbjct: 360 AKALLENLTEKGKATLPNIWGKVAAGFFDKNEVAKAFSCMKAALCLYEENKEWKPNQKVI 419
Query: 421 TSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGI 480
T ILS LGDEGS +D EAFV++L+ VIPMNR+MYHA +KA+IR GK V LLD MK I
Sbjct: 420 TGILSWLGDEGSAEDAEAFVSSLKNVIPMNREMYHAVLKAHIRAGKEVHGLLDGMKTCKI 479
Query: 481 DEDEETKEIL 490
EDEETK+IL
Sbjct: 480 KEDEETKKIL 489
>gi|356555227|ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 486
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/475 (64%), Positives = 373/475 (78%)
Query: 16 AVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKR 75
AV SR YYT+R K +LYS ISPLGNP T + P LD+WV GNK+RV ELQRIIRDLRKR
Sbjct: 7 AVVSRSYYTSRSKKPSLYSKISPLGNPNTSVVPVLDDWVFKGNKLRVAELQRIIRDLRKR 66
Query: 76 KRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYG 135
RFSQAL++S+WM+ KG+C+F+P ++AV LDLIG+VHGF SAE+YF LKD KT +TYG
Sbjct: 67 SRFSQALQISEWMHNKGVCIFSPTEYAVHLDLIGKVHGFSSAETYFDALKDQHKTNKTYG 126
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
ALLNCYVRQRQTDKALSH +KMK++G A S LTYNDIMCLY+ GQ+EKVPDVL EMK
Sbjct: 127 ALLNCYVRQRQTDKALSHLQKMKDLGFASSPLTYNDIMCLYTNIGQHEKVPDVLREMKQN 186
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
+ PDNFSYRICINSYG RSD G+E +L+EME+QP+IV+DW+TY+ AA+FYIKA L
Sbjct: 187 QVLPDNFSYRICINSYGVRSDFGGVERVLKEMETQPNIVMDWNTYSIAANFYIKAGLTRD 246
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLE 315
A L+K+EERL+ KDG GYN LISLYA LG K+EV+R+WDLEK ACKR INRD+ T+LE
Sbjct: 247 AVCALRKSEERLDNKDGQGYNHLISLYAQLGLKNEVMRIWDLEKNACKRCINRDFTTLLE 306
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKAT 375
+L+KLGE +EAEK+LKEWE S N YD IP+ VIIGY GL + A A+LE+L K K T
Sbjct: 307 SLVKLGELDEAEKILKEWESSDNCYDFGIPSIVIIGYSQKGLHEKALAMLEELQNKEKVT 366
Query: 376 TPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
TPN W++VA GY G+ E+ F+C K ALS+YVE KGWKP+ KVI +L +GD GSV+D
Sbjct: 367 TPNCWSIVAGGYIHKGEMEKAFKCFKTALSLYVENKGWKPNAKVIAELLRWIGDNGSVED 426
Query: 436 VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
E V+ LR +P+NRQMYH IK IR GK VD+LL M+ DGIDE++ETK+I+
Sbjct: 427 AEVLVSLLRNAVPVNRQMYHTLIKTYIRGGKEVDDLLGRMEKDGIDENKETKKII 481
>gi|302143027|emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/482 (60%), Positives = 364/482 (75%), Gaps = 1/482 (0%)
Query: 9 TNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRI 68
+ T I N R YT R LYS ISPLG P + P LD WV+ G KVR EL RI
Sbjct: 16 SQTLISNVCSVRSVYTGRFANINLYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRI 75
Query: 69 IRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE 128
IRDLR RKR++QALEVS+WM+ K +C F+P AVQLDLIG+V G SAE+YF+N+ +E
Sbjct: 76 IRDLRSRKRYAQALEVSEWMSSKELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEE 135
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
K + YGALLNCYVR+R DK+LSH +KMKE+G A + L YN +MCLY T Q EK+PDV
Sbjct: 136 KIDKMYGALLNCYVRERVIDKSLSHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDV 195
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
L+EM+ I PDNFSYR+CINSYGARSDL ME IL EMES+ HI +DW TY+ A+FYI
Sbjct: 196 LSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYI 255
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
KA L +KA LKKAE +L KD +GYN LISLYASLG+K+E++RLW+ KTA K+ INR
Sbjct: 256 KAGLNEKALFFLKKAETKL-HKDPLGYNHLISLYASLGSKAEMMRLWERRKTASKKLINR 314
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
DYITML +L+KLGE E+ E +LKEWE SGN YD R+PN ++IG+C GL++ AE++L D+
Sbjct: 315 DYITMLGSLVKLGELEDTEALLKEWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDI 374
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
VE+GK TPNSW++VAAGY + E+ F+CMK A++V E KGW+P PKVI+SILS LG
Sbjct: 375 VEEGKTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLG 434
Query: 429 DEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKE 488
D V++VE FV+AL+ VIPM+R+MYHA I+A+IR GK VD +LDSMKAD IDEDEET++
Sbjct: 435 DNRDVEEVETFVSALKAVIPMDREMYHAQIRASIRAGKEVDGILDSMKADKIDEDEETRK 494
Query: 489 IL 490
IL
Sbjct: 495 IL 496
>gi|225461407|ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 293/488 (60%), Positives = 366/488 (75%), Gaps = 1/488 (0%)
Query: 9 TNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRI 68
+ T I N R YT R LYS ISPLG P + P LD WV+ G KVR EL RI
Sbjct: 16 SQTLISNVCSVRSVYTGRFANINLYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRI 75
Query: 69 IRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE 128
IRDLR RKR++QALEVS+WM+ K +C F+P AVQLDLIG+V G SAE+YF+N+ +E
Sbjct: 76 IRDLRSRKRYAQALEVSEWMSSKELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEE 135
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
K + YGALLNCYVR+R DK+LSH +KMKE+G A + L YN +MCLY T Q EK+PDV
Sbjct: 136 KIDKMYGALLNCYVRERVIDKSLSHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDV 195
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
L+EM+ I PDNFSYR+CINSYGARSDL ME IL EMES+ HI +DW TY+ A+FYI
Sbjct: 196 LSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYI 255
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
KA L +KA LKKAE +L KD +GYN LISLYASLG+K+E++RLW+ KTA K+ INR
Sbjct: 256 KAGLNEKALFFLKKAETKL-HKDPLGYNHLISLYASLGSKAEMMRLWERRKTASKKLINR 314
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
DYITML +L+KLGE E+ E +LKEWE SGN YD R+PN ++IG+C GL++ AE++L D+
Sbjct: 315 DYITMLGSLVKLGELEDTEALLKEWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDI 374
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
VE+GK TPNSW++VAAGY + E+ F+CMK A++V E KGW+P PKVI+SILS LG
Sbjct: 375 VEEGKTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLG 434
Query: 429 DEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKE 488
D V++VE FV+AL+ VIPM+R+MYHA I+A+IR GK VD +LDSMKAD IDEDEET++
Sbjct: 435 DNRDVEEVETFVSALKAVIPMDREMYHAQIRASIRAGKEVDGILDSMKADKIDEDEETRK 494
Query: 489 ILVCTMEK 496
IL +K
Sbjct: 495 ILSLKHDK 502
>gi|357446577|ref|XP_003593564.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482612|gb|AES63815.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 495
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 281/472 (59%), Positives = 362/472 (76%), Gaps = 1/472 (0%)
Query: 19 SRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRF 78
+R YYT++ K +LYS+ISPLGN T + P+LD+WV GNKV VGELQRI+RDLRKR RF
Sbjct: 17 NRSYYTSKTKKPSLYSVISPLGNQTTSVAPQLDDWVYKGNKVSVGELQRIVRDLRKRSRF 76
Query: 79 SQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALL 138
+QAL+VS+WMN+ G+C+F+P +HAV LDL GRVHGF +AE+YF++LKD E+ +T+GALL
Sbjct: 77 TQALQVSEWMNKIGVCIFSPVEHAVHLDLTGRVHGFYAAETYFNSLKDIERNEKTHGALL 136
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
NCYVRQRQ DK+LSH +KMKE+G ALS+LTYN+IMCLY+ GQ+EKV DV EMK ++
Sbjct: 137 NCYVRQRQVDKSLSHLKKMKELGFALSSLTYNNIMCLYTNIGQHEKVSDVFNEMKENHVL 196
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
PDNFSYRICI SYG RSD++GM IL+EMESQPHIV+DW+TY+ A+FYIKA L +A D
Sbjct: 197 PDNFSYRICIGSYGVRSDIDGMNAILKEMESQPHIVMDWNTYSVVANFYIKAELSSEAID 256
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALM 318
L+K E+RL+ KDG GYN LISLYA LG K+EVLRLWD+EK+ACKR +NRD+ITMLE+L+
Sbjct: 257 ALRKCEKRLDDKDGEGYNHLISLYARLGKKNEVLRLWDMEKSACKRCLNRDFITMLESLV 316
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
KL E +EA+K+LKEWE SGN YD +PN V++GY + AEAIL+D+ +K K T +
Sbjct: 317 KLEEFDEADKILKEWEFSGNCYDYGVPNVVVVGYSEKDFPEKAEAILQDIWKKRKYTDTS 376
Query: 379 SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA 438
SW +VA Y G+ E+ +C+K A+ +Y E K KP+ +VI+SI S +GD SV+D EA
Sbjct: 377 SWILVADRYLLKGEMEKALECLKTAVCLYPENKKRKPNHRVISSIYSWIGDNASVEDAEA 436
Query: 439 FVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
V L+ NR MYH+ +KA +R K VD +LD MK D IDE +T EI+
Sbjct: 437 LVRLLKK-FQKNRHMYHSLLKAYVRADKEVDGVLDRMKEDNIDETGKTAEIV 487
>gi|297799892|ref|XP_002867830.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313666|gb|EFH44089.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 283/475 (59%), Positives = 358/475 (75%), Gaps = 1/475 (0%)
Query: 17 VFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRK 76
+ SR+YYTNR+ KTTLYS ISPLG+P + + PEL NWV+ G KV V EL RI+ DLR+RK
Sbjct: 12 IASRYYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRK 71
Query: 77 RFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGA 136
RF ALEVS WMN G+CVF+P +HAV LDLIGRV+GF++AE YF NLK+ K +TYGA
Sbjct: 72 RFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNEKTYGA 131
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LLNCYVRQ+ +K+L HF+KMKEMG S+LTYN+IMCLY+ GQ+EKVP VL EMK +N
Sbjct: 132 LLNCYVRQQNVEKSLLHFQKMKEMGFVSSSLTYNNIMCLYTNIGQHEKVPGVLDEMKEEN 191
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ PDN+S+RICIN++GA SDLE + ILR+ME +P +DW+TYA AA FYI D+A
Sbjct: 192 VAPDNYSFRICINAFGAMSDLERIGGILRDMERRPDFTMDWNTYAVAAKFYIDGGDCDRA 251
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
++LK +E RLE+KDG GYN LI+LYA LGNK EVLRLW+LEK ACKR IN+DY+T+L++
Sbjct: 252 VELLKMSEYRLEKKDGEGYNHLITLYARLGNKIEVLRLWELEKEACKRRINQDYLTVLQS 311
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
LMK+ +EAE VL EWE SGN YD R+PN VI GY + + AEA+LEDL +GK TT
Sbjct: 312 LMKIDGLKEAEVVLTEWESSGNCYDFRVPNTVIRGYTGKSMEEKAEAMLEDLARRGKTTT 371
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV 436
P SW +VA Y + G F+CMK AL + VE + W+P K++TS+LS LG EGS+++V
Sbjct: 372 PESWGLVATAYAEKGALGNAFKCMKTALGIEVENRKWRPGLKLVTSVLSWLGGEGSLKEV 431
Query: 437 EAFVAALRTVIPMNRQMYHAFIKANIR-NGKGVDELLDSMKADGIDEDEETKEIL 490
E+FVA+LR I +N+QMYHA +KA+IR G +D LL MK D I+ DEET IL
Sbjct: 432 ESFVASLRNCIGVNKQMYHALVKADIREGGSNIDTLLKRMKDDQIETDEETTVIL 486
>gi|22328859|ref|NP_680735.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146702|sp|Q84JR3.1|PP334_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g21705, mitochondrial; Flags: Precursor
gi|28393142|gb|AAO42004.1| unknown protein [Arabidopsis thaliana]
gi|28827500|gb|AAO50594.1| unknown protein [Arabidopsis thaliana]
gi|332659092|gb|AEE84492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 492
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/477 (58%), Positives = 356/477 (74%), Gaps = 1/477 (0%)
Query: 15 NAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRK 74
N + SR+YYTNR+ KTTLYS ISPLG+P + + PEL NWV+ G KV V EL RI+ DLR+
Sbjct: 10 NLIASRYYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRR 69
Query: 75 RKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTY 134
RKRF ALEVS WMN G+CVF+P +HAV LDLIGRV+GF++AE YF NLK+ K +TY
Sbjct: 70 RKRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTY 129
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
GALLNCYVRQ+ +K+L HF KMKEMG S+LTYN+IMCLY+ GQ+EKVP VL EMK
Sbjct: 130 GALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKE 189
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
+N+ PDN+SYRICIN++GA DLE + LR+ME + I +DW+TYA AA FYI D
Sbjct: 190 ENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCD 249
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITML 314
+A ++LK +E RLE+KDG GYN LI+LYA LG K EVLRLWDLEK CKR IN+DY+T+L
Sbjct: 250 RAVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVL 309
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
++L+K+ EAE+VL EW+ SGN YD R+PN VI GY + + AEA+LEDL +GKA
Sbjct: 310 QSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKA 369
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
TTP SW +VA Y + G E F+CMK AL V V + W+P ++TS+LS +GDEGS++
Sbjct: 370 TTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLK 429
Query: 435 DVEAFVAALRTVIPMNRQMYHAFIKANIR-NGKGVDELLDSMKADGIDEDEETKEIL 490
+VE+FVA+LR I +N+QMYHA +KA+IR G+ +D LL MK D I+ DEET IL
Sbjct: 430 EVESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVIL 486
>gi|255573349|ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533018|gb|EEF34782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 502
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 279/483 (57%), Positives = 356/483 (73%), Gaps = 2/483 (0%)
Query: 9 TNTQIHNAVFSRFYYTN-RINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQR 67
T + NA+ +R YY R TL++ ISPLG P + P LDNWV+ G K+R ELQ+
Sbjct: 13 TQSLTANAILTRRYYNKARTASNTLFARISPLGEPDISLVPVLDNWVQEGKKIRGFELQK 72
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
IIRDLR +R++QAL+VS+WMN KG F+P DHAVQLDLIGRV G SAESYF NL +
Sbjct: 73 IIRDLRCHRRYTQALQVSEWMNGKGQSGFSPADHAVQLDLIGRVRGLESAESYFQNLVNQ 132
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
++ +TYGALLNCYVR+ DK+L H +KMKE+G A S L YND+MCLY++TGQ EKV D
Sbjct: 133 DRNDKTYGALLNCYVREGLVDKSLYHMQKMKELGFASSPLNYNDLMCLYTRTGQLEKVTD 192
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
VL+EMK I PD FSYRIC++S ARSDL+G+E IL EME+Q HI +DW TY++ A Y
Sbjct: 193 VLSEMKENGITPDLFSYRICMSSCAARSDLKGVEEILEEMENQSHISIDWVTYSTVASIY 252
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
+KA+L +KA LKK E+++ +D +GYN LISL ASLG K EV+RLW L KT CK+ +N
Sbjct: 253 VKASLKEKALIYLKKCEQKV-NRDALGYNHLISLNASLGIKDEVMRLWGLVKTKCKKQVN 311
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
RDYITML AL+KL E EEA+K+L+EWE S YD R+PN ++IGYC GL++ AEA+L+D
Sbjct: 312 RDYITMLGALVKLEELEEADKLLQEWESSCQCYDFRVPNVLLIGYCQQGLIEKAEAMLKD 371
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+V+K K TPNSWA++AAGY + E+ F CMK AL+V E KGW+P +I+SILS L
Sbjct: 372 IVKKQKNPTPNSWAIIAAGYVNKQNMEKAFNCMKEALTVQAENKGWRPKANLISSILSWL 431
Query: 428 GDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETK 487
G+ G V+DVEAFV L T +P +R++YH IKA IR GK VD +L++M A+ IDEDEETK
Sbjct: 432 GENGDVEDVEAFVNLLETKVPKDREIYHTLIKAYIRGGKQVDGVLENMTANKIDEDEETK 491
Query: 488 EIL 490
IL
Sbjct: 492 TIL 494
>gi|224114960|ref|XP_002316903.1| predicted protein [Populus trichocarpa]
gi|222859968|gb|EEE97515.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/438 (55%), Positives = 320/438 (73%), Gaps = 1/438 (0%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
LYS ISPLG+P + P LD WV+ G KV+ EL+ I++ LR+RKRF QALEVS WM+
Sbjct: 1 NLYSRISPLGDPRISLAPVLDQWVEEGKKVKDYELRTIVKGLRERKRFKQALEVSQWMSS 60
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
+C F+P D AV+LDLIG+VHG SAESYF NL + +K ++TYGALLNCYVR +K+
Sbjct: 61 NRLCNFSPSDDAVRLDLIGKVHGLESAESYFKNLDEKDKIHKTYGALLNCYVRGGLVEKS 120
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
LSH +KMKE+G + L YND+MCLY TG EKVPDVL++MK I PD FSYRIC+ S
Sbjct: 121 LSHVQKMKELGFFSTALNYNDLMCLYVNTGLLEKVPDVLSDMKENGISPDLFSYRICLKS 180
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
YG RSD + +E ILREMESQ HI +DW T+A+ A+ Y++A L +KA LKK EE++ K
Sbjct: 181 YGERSDFDNVEKILREMESQSHISMDWRTFATVANIYLEAGLKEKALVYLKKCEEKV-NK 239
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
+ +GYN LISLYASLGNK E++RLW+L K CK+ +NRDYIT+L +L+KLG EEAEK+L
Sbjct: 240 NALGYNHLISLYASLGNKDEMMRLWELAKANCKKQLNRDYITILGSLVKLGHLEEAEKLL 299
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
++WE S YD R+PN V+IGY GL + AEA+L+D++EK K P+SW++++AGY D
Sbjct: 300 QDWESSCQYYDFRVPNVVLIGYSRKGLPEKAEAMLQDIIEKQKMKNPSSWSIISAGYMDK 359
Query: 391 GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMN 450
E+ F+CMK AL+ E GW+P P +I++IL+ LGD Q+VEAFV L T +P +
Sbjct: 360 QNMEKAFECMKEALAAETENNGWRPKPAMISNILNWLGDNRDAQEVEAFVGLLETKVPKS 419
Query: 451 RQMYHAFIKANIRNGKGV 468
R+MYHA IK+ IR GK V
Sbjct: 420 REMYHALIKSYIRCGKEV 437
>gi|357146877|ref|XP_003574143.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Brachypodium distachyon]
Length = 511
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/454 (52%), Positives = 315/454 (69%), Gaps = 5/454 (1%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWV-KNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
+L S + PLG+P T + PE++ W K GN++R EL+RI+++LRKR+R QALEVS+WM+
Sbjct: 58 SLQSTLWPLGHPSTLLVPEIERWADKPGNRLRPVELERIVKELRKRRRHRQALEVSEWMS 117
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
KG+ F P DHAV LDLIG+VHG +AE+YF+ L D +KT + YGALLNCY R+ DK
Sbjct: 118 AKGLVKFLPKDHAVHLDLIGQVHGVGAAEAYFNKLADKDKTEKPYGALLNCYTRELLVDK 177
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
+L+HF+KMKE+G S+L YN++M LY+ GQ+EKVP V+ EMK+ I PDNFSYRICIN
Sbjct: 178 SLAHFQKMKELGFVFSSLPYNNLMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICIN 237
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
SYGAR+D GME L EME +P IV+DW+TYA A+ YIK NL DKA L+KAE +++
Sbjct: 238 SYGARADFFGMENTLEEMECEPQIVVDWNTYAVLANNYIKGNLRDKAISALQKAEAKIDI 297
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
KD YN L+SLY LG+KSEV RLW L+ + CKR+IN+DY TML L+KL E EEAE +
Sbjct: 298 KDSDTYNHLMSLYGQLGDKSEVKRLWALQMSNCKRHINKDYTTMLAMLLKLDEIEEAEAL 357
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
LKEWE S N++D +PN ++ GY L+ AEA+L+D ++KGK T SWA+VA GY +
Sbjct: 358 LKEWESSENAFDFHVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPTSTSWAIVAIGYAE 417
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
G + ++ K AL VY GW P P +I IL LGDE +++DVE FV L+ +PM
Sbjct: 418 KGDVAKAYELTKNALCVYAPNSGWIPRPAMIEMILKYLGDECNLKDVETFVHLLQAAVPM 477
Query: 450 NRQMYHAFIKANIRNGKGVD----ELLDSMKADG 479
N M A +A +R K V+ E L S KA G
Sbjct: 478 NSDMTDALARARMREEKKVEDTGKESLGSSKASG 511
>gi|115473169|ref|NP_001060183.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|34393591|dbj|BAC83218.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113611719|dbj|BAF22097.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|215706491|dbj|BAG93347.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/441 (53%), Positives = 307/441 (69%), Gaps = 1/441 (0%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWV-KNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
+L S + PLG+PGT + PE++ W K GN++R EL+RI+++LRKR+R QALEVS+WMN
Sbjct: 64 SLQSTLWPLGHPGTLLVPEIERWAAKPGNRLRHVELERIVKELRKRRRHRQALEVSEWMN 123
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
KG F P DHAV LDLIG +HG +AE+YF+NL D +KT + YGALLNCY R+ +K
Sbjct: 124 AKGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEK 183
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
+L+HF+KMKE+G STL YN+IM LY+ GQ+EKVP V+ EMK+ I PDNFSYRICIN
Sbjct: 184 SLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICIN 243
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
SYG R+D GME L EME +P IV+DW+TYA A YIK N+ +KA LKKAE ++
Sbjct: 244 SYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKAEAKINI 303
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
KD YN LISLY LG+KSEV RLW L+ + C R+IN+DY TML L+KL E EEAE +
Sbjct: 304 KDSDSYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEVL 363
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
LKEWE SGN++D ++PN ++ GY L+ AEA+L+D ++KGK SWA+VAAGY +
Sbjct: 364 LKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAGYAE 423
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
G + ++ K AL VY GW P P +I IL LGDEG V++VE FV L+ +P+
Sbjct: 424 KGDAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVEIFVDLLKVAVPL 483
Query: 450 NRQMYHAFIKANIRNGKGVDE 470
N M A +A +R K V +
Sbjct: 484 NSDMTDALSRARMREEKKVKD 504
>gi|326530906|dbj|BAK01251.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/453 (51%), Positives = 310/453 (68%), Gaps = 5/453 (1%)
Query: 32 LYSIISPLGNPGTRIEPELDNWV-KNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
L S + PLG+P T + PE++ W K GN++R EL+RI+++LRKR+R QALEVS+WM+
Sbjct: 59 LQSTLWPLGHPDTLLVPEIERWADKPGNRLRPVELERIVKELRKRRRHRQALEVSEWMSA 118
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
KG F P D+AV LDLIG+VHG +AE+YF+ L D +KT + YGALLNCY R+ D +
Sbjct: 119 KGHVRFLPKDYAVHLDLIGQVHGIGAAEAYFNTLPDKDKTEKPYGALLNCYTRELMVDGS 178
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
L+HF+KMKE+G S+L YN++M LY+ GQ+EKVP V+ EMK I PDNFSYRICINS
Sbjct: 179 LAHFQKMKELGFVFSSLPYNNLMGLYTNIGQHEKVPSVIAEMKGSGIMPDNFSYRICINS 238
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
YG R+D GME L +ME +P IV+DW+TYA A YIK NL +KA LKKAE +++ K
Sbjct: 239 YGTRADFFGMENTLEDMECEPQIVVDWNTYAVVASNYIKGNLREKAISALKKAEAKIDIK 298
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
D YN LISLY LG+KSE+ RLW L+ + CKR+IN+DY TML L++L E EEAE +L
Sbjct: 299 DSDTYNHLISLYGQLGDKSEMRRLWGLQMSNCKRHINKDYTTMLAMLVRLDEIEEAEALL 358
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
KEWE S N++D +PN ++ GY + ++ AEA+L+D ++KGK SWA+VA GY +
Sbjct: 359 KEWESSENAFDFHVPNVLLTGYRHKDMLDKAEALLDDFLKKGKMPPSTSWAIVAIGYAEK 418
Query: 391 GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMN 450
G + ++ +K AL VYV GW P P +I IL LGDEG ++DVE FV L+ +PMN
Sbjct: 419 GDCAKAYELIKNALCVYVPRSGWIPRPAMIEMILKYLGDEGDLKDVETFVQLLQAAMPMN 478
Query: 451 RQMYHAFIKANIR----NGKGVDELLDSMKADG 479
M A +A +R +G E L S KA G
Sbjct: 479 SHMTDALSRARMREEKKSGDAEKEALSSTKASG 511
>gi|356514762|ref|XP_003526072.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 492
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/463 (51%), Positives = 321/463 (69%), Gaps = 2/463 (0%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDW 87
N+ LYS ISPLG+P + P LD W++ GN V L II+ LR R R +QALEVS+W
Sbjct: 30 NRRNLYSRISPLGDPSISVVPVLDEWIEEGNAVDGPHLHHIIKILRTRNRNTQALEVSEW 89
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQT 147
M+ KG+ + + D AVQLDLIGRVHG SAE Y +L D +KT++ +GALLNCYVR+
Sbjct: 90 MSSKGLPISSR-DQAVQLDLIGRVHGVESAERYLQSLSDGDKTWKVHGALLNCYVREGLV 148
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
DK+LS +KMK+MG +S L YN+IM LY++T QYEKVP VL +MK + P+ FSYRIC
Sbjct: 149 DKSLSLMQKMKDMGF-VSFLNYNNIMSLYTQTQQYEKVPGVLEQMKKDGVPPNIFSYRIC 207
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
INSY R DL +E +L EME +PHI +DW TY+ +FYIKA++ +KA L K E++
Sbjct: 208 INSYCVRGDLANVEKLLEEMEREPHIGIDWITYSMVTNFYIKADMREKALVCLMKCEKKT 267
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAE 327
+ + + YN LIS A+L +K ++R W L+K CK+ +NR+YITML L+KLGE ++AE
Sbjct: 268 HRGNTVAYNHLISHNAALRSKGGMMRAWKLQKANCKKQLNREYITMLGCLVKLGELDKAE 327
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
KVL EWELSGN+ D R+PN ++IGYC GLV+ AEA+L +V +GK PNSW++VA+GY
Sbjct: 328 KVLGEWELSGNTCDFRVPNILLIGYCQRGLVEKAEALLRKMVAEGKTPIPNSWSIVASGY 387
Query: 388 FDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVI 447
E+ FQCMK A++V+ + K W+P VI+SI S + + +++ E FV + ++V
Sbjct: 388 VAKENMEKAFQCMKEAVAVHAQNKRWRPKVDVISSIFSWVTNNRDIEEAEDFVNSWKSVN 447
Query: 448 PMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
MNR MY + +K IR GK VD +L+SMKAD I+ DEE KE L
Sbjct: 448 AMNRGMYLSLMKMCIRYGKHVDGILESMKADNIEIDEEIKETL 490
>gi|242034057|ref|XP_002464423.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
gi|241918277|gb|EER91421.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
Length = 496
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/451 (50%), Positives = 303/451 (67%), Gaps = 1/451 (0%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWV-KNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
+L S + PLG+P T + PE++ W + N++R ELQRI+R+LRKR R QALEVS+WMN
Sbjct: 45 SLQSTLWPLGHPCTLLVPEIELWAARPRNRLRAVELQRIVRELRKRHRHRQALEVSEWMN 104
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
KG F P DHA+ LDLIG+VHG +AE+YF+NL D +KT + YGALLNCY R+ DK
Sbjct: 105 LKGHVKFLPKDHAIHLDLIGQVHGVGAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDK 164
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
AL+HF+ MKE+G S L+YN++M LY+ GQ+E+VP V+ EMK I PDNFSYRICIN
Sbjct: 165 ALAHFQNMKELGFVFSALSYNNLMGLYTNIGQHERVPMVMAEMKRDGIVPDNFSYRICIN 224
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
SYG R+D G+E L EME +P IV+DW+TYA A YIK L +KA L+KAE ++++
Sbjct: 225 SYGIRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGYLREKAYSALRKAEAKMDK 284
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
KDG Y LISLY LG+K EV RLW L CKRYIN+DY ML L+KL E EAE +
Sbjct: 285 KDGDAYGHLISLYGHLGDKLEVKRLWALHMLNCKRYINKDYTNMLAVLVKLDEITEAEDL 344
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
LKEWE S N++D ++PN ++ GY GL+ AE +L+ ++KGK T SW +VA GY +
Sbjct: 345 LKEWESSKNAFDFQVPNVLLTGYRQKGLLDKAETLLDGFLKKGKTPTSTSWWIVAIGYAE 404
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
G + ++ K ALSV+ GW P P +I IL LG+EG V+DVEAFV L+ +PM
Sbjct: 405 KGDVAKAYELTKNALSVFAPNSGWIPRPSIIEMILKYLGNEGEVKDVEAFVNLLKVAVPM 464
Query: 450 NRQMYHAFIKANIRNGKGVDELLDSMKADGI 480
N M A +A R + +E ++ + D I
Sbjct: 465 NSDMTEALSRARAREERKAEEATEAPREDII 495
>gi|293331503|ref|NP_001168643.1| uncharacterized protein LOC100382430 [Zea mays]
gi|223949857|gb|ACN29012.1| unknown [Zea mays]
gi|413933913|gb|AFW68464.1| hypothetical protein ZEAMMB73_255812 [Zea mays]
Length = 500
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/424 (52%), Positives = 295/424 (69%), Gaps = 1/424 (0%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWV-KNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
+L S + PLG+P T + PE++ W + N +R ELQRI+++LRKR+R QALEVS+WM+
Sbjct: 47 SLDSTLFPLGHPSTLLVPEIELWAARPRNLLRAVELQRIVKELRKRRRHRQALEVSEWMS 106
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
KG F P DHA+ LDLIG++HG +AE+YF+NL D +KT + YGALLNCY R+ DK
Sbjct: 107 LKGHVKFLPKDHAIHLDLIGQIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDK 166
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
AL+HFR MKE+G STL YND+M LY++ GQ+E+VP V+ EMK+ I PDNFSYRICIN
Sbjct: 167 ALAHFRNMKELGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRICIN 226
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
SYG R+D G+E L EME +P IV+DW+TYA A YIK +L +KA L KAE +L++
Sbjct: 227 SYGTRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGDLREKAYSALSKAEAKLDK 286
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
+D Y LISLY +LG+KSE RLW ++ + CKRYINRDY+ ML L+KL E EAE +
Sbjct: 287 QDPDAYRHLISLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEAEDL 346
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
LKEWE S NS+D R+PN ++ GY L+ AE +L+ ++KGK SW +VA GY +
Sbjct: 347 LKEWESSQNSFDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPSTSWGIVAIGYAE 406
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
G + ++ K ALSV+ GW P P ++ IL LGDEG V+DVEAFV+ L+ +P+
Sbjct: 407 KGDVAKAYEMTKNALSVHAPNTGWIPRPSMLEMILKYLGDEGEVKDVEAFVSLLKAAVPV 466
Query: 450 NRQM 453
+ M
Sbjct: 467 DSDM 470
>gi|242096946|ref|XP_002438963.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
gi|241917186|gb|EER90330.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
Length = 502
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/451 (49%), Positives = 300/451 (66%), Gaps = 1/451 (0%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWV-KNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
TL S + PLGNPGT + PE++ W + N +R +L+RI+++LR R+R QALEVS+WMN
Sbjct: 51 TLGSTLWPLGNPGTLLVPEIELWAARPENHLRDVDLRRIVKELRTRRRHRQALEVSEWMN 110
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
KG F P DHAV LDLIG +HG +AE+YF+NL D +KT + YGALLNCY R+R DK
Sbjct: 111 LKGHVKFLPKDHAVHLDLIGHIHGVGAAETYFNNLSDKDKTEKPYGALLNCYTRERLVDK 170
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
AL+HF+KMKE+G + L YN++M LY+ Q+E+VP V+ EMK+ I PDNFSYRICIN
Sbjct: 171 ALAHFQKMKELGFVFTALPYNNLMSLYTNIEQHERVPSVMAEMKSNGIVPDNFSYRICIN 230
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
SYG R+D G+E L EME +P IV+DW+TY A YIK +L +KA LKKAE ++
Sbjct: 231 SYGTRADFFGLENTLEEMECEPQIVVDWNTYTVVASQYIKGDLREKAYSALKKAEAKMGI 290
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
KD Y LISLY LG+KSEV RLW ++ + C+R++N DY +L L+KL E EAE +
Sbjct: 291 KDLAAYRHLISLYGHLGDKSEVKRLWAVQMSNCQRHLNTDYTNILAVLVKLDEIAEAEDL 350
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
LKEWE S N +D ++PN ++ YC GL+ AEA+L+ + KGK SW +VA+GY +
Sbjct: 351 LKEWETSKNEFDFKVPNVLLTWYCQKGLLDKAEALLDGFLIKGKMPPSTSWEIVASGYTE 410
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
G R ++ K AL +Y GW P+P +I IL LGDE V+DVEAF+ L+ +PM
Sbjct: 411 KGDVARAYELTKNALYMYAPNSGWVPEPSMIEMILKYLGDEREVKDVEAFIDLLKVAVPM 470
Query: 450 NRQMYHAFIKANIRNGKGVDELLDSMKADGI 480
N M A +A R K + ++++ D I
Sbjct: 471 NSDMTEALSRARSREEKKGEGAREALREDLI 501
>gi|222637397|gb|EEE67529.1| hypothetical protein OsJ_24995 [Oryza sativa Japonica Group]
Length = 491
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/441 (51%), Positives = 294/441 (66%), Gaps = 16/441 (3%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWV-KNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
+L S + PLG+PGT + PE++ W K GN++R EL+RI VS+WMN
Sbjct: 64 SLQSTLWPLGHPGTLLVPEIERWAAKPGNRLRHVELERI---------------VSEWMN 108
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
KG F P DHAV LDLIG +HG +AE+YF+NL D +KT + YGALLNCY R+ +K
Sbjct: 109 AKGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEK 168
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
+L+HF+KMKE+G STL YN+IM LY+ GQ+EKVP V+ EMK+ I PDNFSYRICIN
Sbjct: 169 SLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICIN 228
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
SYG R+D GME L EME +P IV+DW+TYA A YIK N+ +KA LKKAE ++
Sbjct: 229 SYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKAEAKINI 288
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
KD YN LISLY LG+KSEV RLW L+ + C R+IN+DY TML L+KL E EEAE +
Sbjct: 289 KDSDSYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEVL 348
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
LKEWE SGN++D ++PN ++ GY L+ AEA+L+D ++KGK SWA+VAAGY +
Sbjct: 349 LKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAGYAE 408
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
G + ++ K AL VY GW P P +I IL LGDEG V++VE FV L+ +P+
Sbjct: 409 KGDAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVEIFVDLLKVAVPL 468
Query: 450 NRQMYHAFIKANIRNGKGVDE 470
N M A +A +R K V +
Sbjct: 469 NSDMTDALSRARMREEKKVKD 489
>gi|242096944|ref|XP_002438962.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
gi|241917185|gb|EER90329.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
Length = 503
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/444 (48%), Positives = 294/444 (66%), Gaps = 1/444 (0%)
Query: 24 TNRINKTTLYSIISPLGNPGTRIEPELDNWV-KNGNKVRVGELQRIIRDLRKRKRFSQAL 82
T TL+S + PLG PGT + PE++ W ++G ++R EL +++DLR+R R QAL
Sbjct: 44 TPPARPPTLWSTLCPLGKPGTLLVPEIELWAARSGKRLRPCELHFVVKDLRRRHRHRQAL 103
Query: 83 EVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYV 142
EVS+WMN KG F P DHAV LDLIG +HG +AE+YF+NL D +KT + YGALL CY
Sbjct: 104 EVSEWMNLKGHVKFLPKDHAVHLDLIGHIHGVGAAETYFNNLSDKDKTEKPYGALLYCYT 163
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
R+ DKAL+HF+KMKE+G + L Y+++M LY+ Q+E+VP V+ EMK+ I P+NF
Sbjct: 164 RECLVDKALAHFQKMKELGFVFTPLPYSNLMILYANVEQHERVPSVMAEMKSNGIVPNNF 223
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
SY ICIN+YG R+D G+E L EME +V+DW TYA A YIK +L +KA L+K
Sbjct: 224 SYNICINAYGTRADFSGLENTLEEMEFASQVVVDWRTYADVASHYIKGDLREKAYSALQK 283
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGE 322
AE ++++KD Y+ LISLY LG+KSE+ RLW L+ CK IN+ Y ML L+KL E
Sbjct: 284 AEAKMDEKDSFAYSHLISLYGHLGDKSEIKRLWVLQMLKCKGCINKGYKYMLTVLVKLDE 343
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
EAE +LK+WE S N +D ++PN ++ GYC GL+ AEA+L+ + KGK + SWA+
Sbjct: 344 IAEAEDLLKKWESSKNEFDFKVPNILLKGYCQWGLLDKAEALLDGFLRKGKKPSATSWAI 403
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAA 442
VA+ Y + G R ++ K ALS+ V GW P+P +I IL LGDEG V+DVEAF+
Sbjct: 404 VASAYAEKGDVPRAYELTKRALSMCVPDSGWIPEPSMIEVILKYLGDEGEVKDVEAFIDL 463
Query: 443 LRTVIPMNRQMYHAFIKANIRNGK 466
L+ V+PMN M A +A R K
Sbjct: 464 LKVVVPMNSDMTEALSRARSREEK 487
>gi|449431834|ref|XP_004133705.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
gi|449478158|ref|XP_004155237.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
Length = 492
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/467 (48%), Positives = 322/467 (68%), Gaps = 15/467 (3%)
Query: 20 RFYYTNR-INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRF 78
R Y T R ++ LY+ ISPLG+P + P L+ W++ G ++ EL+RI+RDLR +R+
Sbjct: 35 RLYSTRRSCDRRNLYARISPLGDPECTVVPVLNQWIEEGRNIKDFELRRIVRDLRTCRRY 94
Query: 79 SQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALL 138
QALEVS+WM KG+ D A+QLDLIG+V G SAE YF ++ + ++ + YGALL
Sbjct: 95 RQALEVSEWMCSKGLFSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALL 154
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
NCYVR+ DK+L+H +KMKEMG+A S L YNDIMCLY TGQ +KVP+VL+EMK +
Sbjct: 155 NCYVREGLIDKSLAHMQKMKEMGLASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVL 214
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
PDNFSYRICI+SYGARSD+ ME +L+EME Q HI +DW+TY+ A F+IKA + DKA +
Sbjct: 215 PDNFSYRICISSYGARSDVISMENVLKEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMN 274
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALM 318
L+K E+++++ D +G+N LIS Y +LG+K+EV+RLW L K K+ +NRDYITML +L+
Sbjct: 275 YLRKCEDKVDE-DALGFNHLISHYTNLGHKNEVMRLWALLKKG-KKQLNRDYITMLGSLV 332
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
KL EEAE ++ EWE S YD R+PN V+IGY GL++ AE +L +++ G +PN
Sbjct: 333 KLELLEEAENLVMEWESSCQCYDFRVPNVVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPN 392
Query: 379 SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA 438
SW ++A+GY + E+ F+CMK AL+V + K W+P P V++SIL L + ++++
Sbjct: 393 SWGIIASGYLEKQNLEKAFECMKEALAVKGQNKVWRPKPNVLSSILRWLSENRRYEEMKE 452
Query: 439 FVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSM-KADGIDEDE 484
F+++L+TV M+ ++ +A +DELL+ M DGI +DE
Sbjct: 453 FMSSLKTVPSMDEKLNNA-----------LDELLEIMANDDGISKDE 488
>gi|125559056|gb|EAZ04592.1| hypothetical protein OsI_26742 [Oryza sativa Indica Group]
Length = 402
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/392 (52%), Positives = 265/392 (67%)
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQT 147
MN KG F P DHAV LDLIG +HG +AE+YF+NL D +KT + YGALLNCY R+
Sbjct: 1 MNAKGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLV 60
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
+K+L+HF+KMKE+G STL YN+IM LY+ GQ+EKVP V+ EMK+ I PDNFSYRIC
Sbjct: 61 EKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRIC 120
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
INSYG R+D GME L EME +P IV+DW+TYA A YIK N+ +KA LKKAE ++
Sbjct: 121 INSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKAEAKI 180
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAE 327
KD YN LISLY LG+KSEV RLW L+ + C R+IN+DY TML L+KL E EEAE
Sbjct: 181 NIKDSDSYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLVKLNEIEEAE 240
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
+LKEWE SGN++D ++PN ++ GY L+ AEA+L+D ++KGK SWA+VAAGY
Sbjct: 241 VLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAGY 300
Query: 388 FDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVI 447
+ G + ++ K AL VY GW P P +I IL LGDEG V++VE FV L+ +
Sbjct: 301 AEKGDAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVEIFVDLLKVAV 360
Query: 448 PMNRQMYHAFIKANIRNGKGVDELLDSMKADG 479
P+N M A +A +R K V + + DG
Sbjct: 361 PLNSDMTDALSRARMREEKKVKDAVRMWVGDG 392
>gi|223949005|gb|ACN28586.1| unknown [Zea mays]
Length = 396
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/366 (52%), Positives = 253/366 (69%)
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQT 147
M+ KG F P DHA+ LDLIG++HG +AE+YF+NL D +KT + YGALLNCY R+
Sbjct: 1 MSLKGHVKFLPKDHAIHLDLIGQIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTRELLV 60
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
DKAL+HFR MKE+G STL YND+M LY++ GQ+E+VP V+ EMK+ I PDNFSYRIC
Sbjct: 61 DKALAHFRNMKELGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRIC 120
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
INSYG R+D G+E L EME +P IV+DW+TYA A YIK +L +KA L KAE +L
Sbjct: 121 INSYGTRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGDLREKAYSALSKAEAKL 180
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAE 327
+++D Y LISLY +LG+KSE RLW ++ + CKRYINRDY+ ML L+KL E EAE
Sbjct: 181 DKQDPDAYRHLISLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEAE 240
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
+LKEWE S NS+D R+PN ++ GY L+ AE +L+ ++KGK SW +VA GY
Sbjct: 241 DLLKEWESSQNSFDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPSTSWGIVAIGY 300
Query: 388 FDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVI 447
+ G + ++ K ALSV+ GW P P ++ IL LGDEG V+DVEAFV+ L+ +
Sbjct: 301 AEKGDVAKAYEMTKNALSVHAPNTGWIPRPSMLEMILKYLGDEGEVKDVEAFVSLLKAAV 360
Query: 448 PMNRQM 453
P++ M
Sbjct: 361 PVDSDM 366
>gi|296086986|emb|CBI33242.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/287 (64%), Positives = 219/287 (76%), Gaps = 36/287 (12%)
Query: 15 NAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRK 74
N + +R YYT+R K +LY+ ISPLG+P T + PELDNWV+NGNKV V ELQRII DLRK
Sbjct: 24 NPISNRTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRK 83
Query: 75 RKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTY 134
RKRFSQALE+S+WM++KGIC F+P +HAVQLDLIGRV GFLSAESYF++L++ +KT +TY
Sbjct: 84 RKRFSQALEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTY 143
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
GALLNCYVRQRQTDK+LSH +KMKEMG A S LTYNDIMCLY+ GQ+EKVPDVLTEMK
Sbjct: 144 GALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQ 203
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
N++PDNFSYRICINSYGA+SD++GME +L+EME QPHI
Sbjct: 204 SNVYPDNFSYRICINSYGAQSDIQGMENVLKEMERQPHI--------------------- 242
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
+DG+GYN LISLYASLGNK+EVLRLW LEK
Sbjct: 243 ---------------RDGLGYNHLISLYASLGNKAEVLRLWSLEKNV 274
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 420 ITSILSKLGDEGSV-------QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELL 472
+ S+ + LG++ V ++VEAFV +LR VIPMNR+MYH I ANIR GK VD LL
Sbjct: 251 LISLYASLGNKAEVLRLWSLEKNVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVDGLL 310
Query: 473 DSMKADGIDEDEETKEIL 490
SMKAD I EDEETK+IL
Sbjct: 311 ASMKADKIVEDEETKKIL 328
>gi|225446335|ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial [Vitis vinifera]
Length = 499
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/423 (39%), Positives = 268/423 (63%), Gaps = 7/423 (1%)
Query: 24 TNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALE 83
T+ K +L S ISP + I P L+ W K G ++ +L R+IR LR KR++ ALE
Sbjct: 29 TSNAPKESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALE 88
Query: 84 VSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVR 143
+ +W+ K +P D A+QLDLI +VHG AE YF+ + +++Q YGALLNCY +
Sbjct: 89 IYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQ 148
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
++ +KA + ++M++MG + TL+YN ++ LYS+ G++EK+ +++ EM+ I D+F+
Sbjct: 149 KKSLEKAEAIMQEMRDMGF-VKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFT 207
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
Y I +N+Y A SD+EGME +L ++E+ P + DW+ Y AA+ Y+KA+L +KA ++LKK+
Sbjct: 208 YCIRLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKS 267
Query: 264 EERLEQKD-GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGE 322
E+ + + GY L++LYA++GNK+EV R+W+L KT K + N Y+ M+ +L+KL +
Sbjct: 268 EQFISGRSRRFGYEILLTLYATMGNKTEVYRIWNLYKTIGK-FFNTGYVAMVSSLLKLDD 326
Query: 323 HEEAEKVLKEWELSGNS-YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+ AEK +EW LSGN +D R+PN +I YC GL++ AE ++ +E+G+ +W
Sbjct: 327 MDGAEKTFEEW-LSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWD 385
Query: 382 VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
+AAGY + + E+ +K AL +GWKP+P +++ L L +G V++ E +
Sbjct: 386 ALAAGYHENNQMEKAVDTLKKAL--LATSQGWKPNPVTLSACLEYLKGKGDVEEAENLIR 443
Query: 442 ALR 444
LR
Sbjct: 444 LLR 446
>gi|147775992|emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
Length = 499
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 266/423 (62%), Gaps = 7/423 (1%)
Query: 24 TNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALE 83
T+ K +L S ISP + I P L+ W K G ++ +L R+IR LR KR++ ALE
Sbjct: 29 TSNAPKESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALE 88
Query: 84 VSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVR 143
+ +W+ K +P D A+QLDLI +VHG AE YF+ + +++Q YGALLNCY +
Sbjct: 89 IYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQ 148
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
++ +KA + ++M++MG + TL+YN ++ LYS+ G++EK+ +++ EM+ I D+F+
Sbjct: 149 KKSLEKAEAIMQEMRDMGF-VKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFT 207
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
Y I +N+Y A SD+EGME +L ++E+ P + DW+ Y AA+ Y+KA+L +KA ++LKK+
Sbjct: 208 YCIRLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKS 267
Query: 264 EERLEQKD-GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGE 322
E+ + + GY L++LYA++GNK+E R+W+L KT K + N Y+ M+ +L+KL +
Sbjct: 268 EQFISGRSRRFGYEILLTLYATMGNKTEXYRIWNLYKTIGK-FFNTGYVAMVSSLLKLDD 326
Query: 323 HEEAEKVLKEWELSGNS-YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+ AEK +EW LSGN +D R+PN +I YC GL++ AE ++ +E+G+ +W
Sbjct: 327 MDGAEKTFEEW-LSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWD 385
Query: 382 VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
+AAGY + + E+ +K AL +GWKP+P +++ L L + V++ E +
Sbjct: 386 ALAAGYHENNQMEKAVDTLKKAL--LATSQGWKPNPVTLSACLEYLKGKXDVEEAENLIR 443
Query: 442 ALR 444
LR
Sbjct: 444 LLR 446
>gi|449523946|ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 461
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 237/391 (60%), Gaps = 6/391 (1%)
Query: 18 FSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKR 77
F FY T + K LY ISP+G+P + P LD WV G V+ EL+ II++LR KR
Sbjct: 19 FVNFYST--VVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKR 76
Query: 78 FSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGAL 137
F ALE+S WM+ K + D A++++LI RVHG E YF N+ K YQ + AL
Sbjct: 77 FKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIAL 136
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI 197
LNCY ++ DKA + +K+KEMG A S L YN +M LY + G++E++ +L EMK + +
Sbjct: 137 LNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGV 196
Query: 198 FPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKAS 257
+ D F+Y I I++Y A SD G+E I+ +MES P IVLDW+ Y AA+ Y K LIDK+
Sbjct: 197 YYDRFTYSIRISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNKVGLIDKSI 256
Query: 258 DVLKKAEERLE--QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLE 315
+LKK+E L +K G +N + LYA G K E+ R+W+L K ++ N+ +I+M+
Sbjct: 257 SMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK--EKIFNKGFISMIT 314
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKAT 375
+L+ L + + AE++ KEWE SYD RIPN ++ YC GL++ AE +L ++V +
Sbjct: 315 SLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKF 374
Query: 376 TPNSWAVVAAGYFDAGKTERGFQCMKAALSV 406
+ SW +A+GY + + + +K A SV
Sbjct: 375 SVESWCYLASGYLQKDQLPQAVETLKLAASV 405
>gi|148909871|gb|ABR18022.1| unknown [Picea sitchensis]
Length = 561
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/469 (36%), Positives = 265/469 (56%), Gaps = 9/469 (1%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
LY IS LG+P EL+ W+ G +V+ L+ I+R+LRK R ALEV +WM++K
Sbjct: 96 LYRRISRLGDPKRSAVEELERWITEGREVKKWVLREIVRELRKYYRHKHALEVFEWMSKK 155
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
C D A+ L LI +VHG SAE Y+ +L EK + TY ALLNCYV+++ +K+
Sbjct: 156 FPCSVG--DRAMHLGLIAKVHGIASAEKYYVDLHHYEKNHLTYFALLNCYVQEKNIEKSE 213
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
+ ++K++G + Y ++M LY T Q+EKVP V+ EMK K I D Y I + SY
Sbjct: 214 AIMEELKDLGFIKTAFPYTEMMTLYMNTEQFEKVPLVIQEMKKKGISLDIHCYNIWMRSY 273
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ-- 269
A SD++ + + E+E +I DWS Y++ A+ YI A ++DKA LK+ E ++++
Sbjct: 274 AALSDMDQVAEVFNEIERDDNINTDWSIYSTLANIYINAKVLDKAGSALKEMENKMKEIE 333
Query: 270 --KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAE 327
KD + YN LISL+ LGNK EV R+W + A + NR Y+ +L +L+ +G+ E AE
Sbjct: 334 TKKDQLAYNHLISLHGRLGNKDEVYRIWQSFELAFPKMTNRSYVCLLSSLVGMGDIEGAE 393
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
+K+WE D+RI A++ Y G +Q AE +LE +V+KG +W +A GY
Sbjct: 394 VFIKKWESMKTFDDSRIYYALLNAYIEKGWLQKAELLLERVVDKGGKPNAKTWETLAEGY 453
Query: 388 FDAGKTERGFQCMKAALSVYVEGKG-WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV 446
+ + + MK +LS +EG W+P + ++L +G V+ E F LR V
Sbjct: 454 IQNEQIHKAMEAMKRSLS--IEGNSPWQPKSVNVLALLKHFEKQGDVKSAEEFFKILRGV 511
Query: 447 IPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCTME 495
++ ++Y++ ++ + GK + + M D + DEET +L T+E
Sbjct: 512 KFVSTEIYNSLLRTYVYVGKVPPRISELMLEDNVSPDEETDNLLKQTVE 560
>gi|449479000|ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 493
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 164/438 (37%), Positives = 261/438 (59%), Gaps = 12/438 (2%)
Query: 21 FYYTNRI----NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRK 76
FY T + + TL+ + G+P T I LD WV+ G +V+ +LQ +I+ LRK
Sbjct: 23 FYSTKSLPSPSTEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVKQSDLQTLIKQLRKFG 82
Query: 77 RFSQALEVSDWM-NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYG 135
RF+QAL++ +W+ N + C+ + D AV+L LI + G AE YFS++ + + ++ YG
Sbjct: 83 RFNQALQLCEWVRNERNQCL-STGDIAVELHLISKARGLEQAEKYFSSIGESSRDHKVYG 141
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
ALL+CYV + KA + +KM+E+G + L+YN ++ LY+ G++EK+ ++L EM+
Sbjct: 142 ALLHCYVENKNLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEM 201
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
I PD F+Y I +N+Y A SD+ ME +L +ME+ P + DW TY + Y KA L +
Sbjct: 202 GIGPDRFTYNIRMNAYAAASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLSEN 261
Query: 256 ASDVLKKAEERL-EQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITML 314
+ +LKKAE+ + +++ + Y +L++LYA++GNK EV R+W+L KR+ N Y+ ++
Sbjct: 262 SILMLKKAEQFIGDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLYTNLRKRF-NSGYLCII 320
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
+LMKL + + AE++LKEWE S+D RIPN +I YC G V AEA + L+E GK
Sbjct: 321 SSLMKLDDIDGAERILKEWESGDTSFDFRIPNMMINSYCMKGFVDKAEAYINRLIETGKE 380
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
N+W ++A+GY G T + + +K A+S V WKP ++ + L L +V
Sbjct: 381 PEANTWDLLASGYHSNGLTNKVAETLKKAIS--VSPPHWKPKYHILAACLEYLKTNENVD 438
Query: 435 DVEAFVAAL--RTVIPMN 450
E + L R + P+N
Sbjct: 439 LAEEIIGLLCKRDIFPLN 456
>gi|357140786|ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Brachypodium distachyon]
Length = 497
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 165/462 (35%), Positives = 266/462 (57%), Gaps = 7/462 (1%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNK-VRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
+LY ++ + P ++ P L+ W ++ V ELQ II+ L + +RFS ALE+S WM
Sbjct: 36 SLYHRVAAVAIPRLQLTPVLEQWAFAEDRPVEKHELQAIIKKLIRLRRFSHALEMSMWMT 95
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
+ P D A +L+LI +VHG SA YF L + K Q YG+LL CY + ++
Sbjct: 96 DRRYFPLKPGDVAYRLELISKVHGLKSAVEYFGGLSKEIKKSQCYGSLLKCYAEAKFVEE 155
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A F +M+EMG+ +S+ YN +M LY +TGQ EKV + M+ I PD F+ I +
Sbjct: 156 AEKFFGEMQEMGM-MSSYPYNVMMKLYWETGQVEKVRTMYRAMEESGIKPDLFTIDILLT 214
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
Y A DLEG+E +L + + + ++V W +YA A ++KA L KA L+++E+R++
Sbjct: 215 VYKASGDLEGIEEVLEKAKPRENLV-GWHSYAIVASAFMKAGLQGKALQALQESEKRIDP 273
Query: 270 KDG-IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
K+G + Y FL+S+ A G +SEV R+WD+ K+ N Y+ + AL+K+ + +EAEK
Sbjct: 274 KNGRVAYGFLLSMCADSGMRSEVDRIWDVYKSKVPT-CNSMYMCRISALLKMNDTDEAEK 332
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+EWE +D R+ N ++ GYC GL++ AEA++++ + KG+ N+W +AAG+F
Sbjct: 333 AFREWESRFVHHDFRLINLLLNGYCAEGLMEKAEALVDEAITKGRMPYANTWYKLAAGFF 392
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
G+ + + AL+ GW+PD + L ++ +V+ E + LR+++P
Sbjct: 393 KDGQVLKAVDLTRKALASAT--SGWEPDLTNVLMSLDHFMEQKNVEAAEEMASLLRSLVP 450
Query: 449 MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ R +YH+ +K + G V +LLD M DG + D+ET IL
Sbjct: 451 LTRDVYHSLLKTYVHAGMPVSDLLDRMNEDGFEADQETDRIL 492
>gi|224138178|ref|XP_002322749.1| predicted protein [Populus trichocarpa]
gi|222867379|gb|EEF04510.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/457 (36%), Positives = 266/457 (58%), Gaps = 12/457 (2%)
Query: 23 YTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQAL 82
+T+ +N LY+ IS L + I L++WV G V +L+ I++LR KR++ AL
Sbjct: 54 WTDAMN--VLYNRISSLADQRITISLFLNHWVLEGQPVNKNQLREFIKELRFHKRYAHAL 111
Query: 83 EVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYV 142
E+S WM G A D AVQLDLI +VHG A+ F+N K + Y ALLNCY
Sbjct: 112 EISTWMTDSGYFELASQDVAVQLDLISKVHGIEQAQKLFNNTPQHLKVLKVYSALLNCYA 171
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
+ + +KA S ++MK +G A + L YN I+ Y +TG +K+ ++ EM+ I D F
Sbjct: 172 KAKLVEKAESVVQEMKSLGFANTLLVYNVILNFYYQTGNPDKINSLMQEMEQNGIGCDKF 231
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
++ I +++Y + SD+ G+E L +MES P++ LDW++Y +AA YIK L+DKA ++L+K
Sbjct: 232 AHSIQLSAYASVSDIVGIEKTLAKMESDPNVFLDWTSYTAAAKGYIKVGLVDKALEMLEK 291
Query: 263 AEERLE-QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLG 321
+E + ++ G Y+ LI+LYA+ G +EVLR+W+L K K Y YI+++ +L+KL
Sbjct: 292 SERLVTGKRRGTAYDSLITLYAATGKTNEVLRIWELYKKNEKVY-KEAYISIITSLLKLD 350
Query: 322 EHEEAEKVLKEWELSGNS-YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
+ E AEK+ +EWE +S YD IPN +I Y GLV+ AE +++ + KG +W
Sbjct: 351 DFENAEKIFEEWEFQNHSCYDIHIPNFLIDAYSRKGLVEKAETLIDRAISKGGEPNAKTW 410
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
+A GY G+T + + MK A V V G+ WKP +++ + L L EG + + F+
Sbjct: 411 YHLATGYLQNGQTLKAVEAMKKA--VVVSGRMWKPSNEILANCLGYLKVEGDLGKLTNFM 468
Query: 441 AALR--TVIPMNRQMYHAFIKANIRNGKGVDELLDSM 475
LR +I ++ Q + +I+N K ++L ++
Sbjct: 469 DLLRDNDIISLDIQ---ERLLNHIKNAKSSSDVLGAL 502
>gi|255553771|ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542908|gb|EEF44444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 260/461 (56%), Gaps = 5/461 (1%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
TLY IS G P I P L+ W++ GN V+ ELQ+ ++ LRK +RF+ AL+VS+WM
Sbjct: 40 TLYGRISKAGKPSISIVPILEKWLEEGNDVKKPELQKFVKQLRKYRRFTHALQVSEWMTD 99
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
K C P D AV+LDLI +VHG + AE YF+++ D + Q YGALLNC + KA
Sbjct: 100 KKGCSLLPGDVAVRLDLISKVHGLVKAEEYFNSIPDTSRDRQVYGALLNCCAHSKLLGKA 159
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+ +KMK++G ++L+YN ++ LYS G YEK+ ++ EM+ I D +Y I +N+
Sbjct: 160 EATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRLNA 219
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE-Q 269
SD+EGME +L +ME P+I + + Y AA+ Y+KA L+DK +LK++E+ +
Sbjct: 220 CVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLISGN 279
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
Y FL++LY + GNK+EV R+W+ K R+ N YI M+ +L+KL + + AE++
Sbjct: 280 TRRFAYEFLLTLYTASGNKAEVYRIWNKYKE-IGRFFNSGYICMISSLLKLDDIDGAERI 338
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
+EW+ +D RIPN+++ Y G ++ AE + +V G+ SW +AAGY
Sbjct: 339 FEEWDSKKVLFDIRIPNSMVNVYSRKGHLEKAETYINKIVASGEEPDATSWNHLAAGYHS 398
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
+G+ + + ++ A+S V GWKP +++ L L +G + +E + +
Sbjct: 399 SGQMTKAVETIRKAIS--VSKPGWKPSLLTLSACLEFLKGQGDAETLEELLKIAKEHCCF 456
Query: 450 NRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ Y A + + I N LD M+ D + EE L
Sbjct: 457 SAGAY-AKLSSCIDNENLTTIALDQMEEDYQNFSEEPPAAL 496
>gi|449438086|ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 486
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 258/438 (58%), Gaps = 12/438 (2%)
Query: 21 FYYTNRI----NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRK 76
FY T + + TL+ + G+P T I LD WV+ G +V +LQ++I+ LR
Sbjct: 23 FYSTKSLPSPSTEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLRTFG 82
Query: 77 RFSQALEVSDW-MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYG 135
RF+ AL++ +W N + C +P A+QL LI + G AE YFS++ + + ++ YG
Sbjct: 83 RFNHALQLCEWERNERNKCP-SPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHKVYG 141
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
ALL+CYV + KA + +KM+E+G + L+YN ++ LY++ G++EK+ +++ EM+
Sbjct: 142 ALLHCYVENKNLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEM 201
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
I + F+Y + +N+Y A SD+ ME +L +ME+ P + DW Y + + Y KA L +
Sbjct: 202 GIGHNRFTYNVRMNAYAAASDITNMEKLLSKMEADPLVATDWHIYFTVGNGYFKAGLSEN 261
Query: 256 ASDVLKKAEERL-EQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITML 314
+ +LKKAE+ + +++ + Y +L++LYA++GNK EV R+W+L KR+ N Y+ ++
Sbjct: 262 SISMLKKAEQLIGDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLYTNLQKRF-NSGYLCII 320
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
+LMKL + + AE++LKEWE S+D +IPN +I YC G V AEA + L+E GK
Sbjct: 321 SSLMKLDDIDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKE 380
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
+W +A+GY G T + + +K A+S V WKP+ ++ + L L G+V+
Sbjct: 381 PRAYAWDRLASGYHSNGLTNKAAETLKKAIS--VSPPRWKPNYDILAACLEYLKTNGNVE 438
Query: 435 DVEAFVAAL--RTVIPMN 450
E + L R + P+N
Sbjct: 439 LAEEIIGLLCKRDIFPLN 456
>gi|15225409|ref|NP_179663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206559|sp|Q9SKU6.1|PP166_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g20710, mitochondrial; Flags: Precursor
gi|4454477|gb|AAD20924.1| hypothetical protein [Arabidopsis thaliana]
gi|51315392|gb|AAT99801.1| At2g20710 [Arabidopsis thaliana]
gi|330251965|gb|AEC07059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 490
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/459 (36%), Positives = 257/459 (55%), Gaps = 10/459 (2%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
TL ++ G+P I LD W+ GN V+ EL II+ LRK RFS AL++SDWM+
Sbjct: 39 TLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSE 98
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
+ + D A++LDLI +V G AE +F + + + Y YGALLNCY ++ KA
Sbjct: 99 HRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKA 158
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
F++MKE+G L YN ++ LY +TG+Y V +L EM+ + + PD F+ +++
Sbjct: 159 EQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHA 218
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE-Q 269
Y SD+EGME L E+ + LDW TYA A+ YIKA L +KA ++L+K+E+ + Q
Sbjct: 219 YSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQ 278
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
K Y L+S Y + G K EV RLW L K Y N YI+++ AL+K+ + EE EK+
Sbjct: 279 KRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFY-NTGYISVISALLKMDDIEEVEKI 337
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
++EWE + +D RIP+ +I GYC G+++ AE ++ LV+K + ++W +A GY
Sbjct: 338 MEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKM 397
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
AGK E+ + K A+ V GW+P V+ S + L EG +D+E LR +
Sbjct: 398 AGKMEKAVEKWKRAIE--VSKPGWRPHQVVLMSCVDYL--EGQ-RDMEGLRKILRLLSER 452
Query: 450 NRQMYHAFIKANIRNGKGVD-ELLDSMKADGIDEDEETK 487
Y + NG G+ +++D+M E+ E +
Sbjct: 453 GHISYDQLLYD--MNGAGLSWKIVDAMGKGRYVEEREVR 489
>gi|224121680|ref|XP_002330626.1| predicted protein [Populus trichocarpa]
gi|222872230|gb|EEF09361.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 249/420 (59%), Gaps = 11/420 (2%)
Query: 36 ISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICV 95
IS GNP I P ++ W+K GN ++ +LQ I+ R+ +RFS AL++S WM+ +
Sbjct: 10 ISRAGNPKVSIIPVIEQWLKEGNSIKQSDLQNFIKLFRRHRRFSHALQISQWMSDERGSE 69
Query: 96 FAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFR 155
+P D AV+LDLI +VHG AE Y++++ D + Q YGALLNCY +R+ +KA + +
Sbjct: 70 QSPGDFAVRLDLISKVHGLEQAEEYYNSIPDHLRGTQVYGALLNCYAHKRRLEKAEATMQ 129
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARS 215
KM+E+G+ + TL+YN ++ LYS G+YEK+ ++ EM+ K + D +++ I +++Y A S
Sbjct: 130 KMRELGL-VQTLSYNVMLSLYSHMGRYEKLEALVKEMEEKGVNSDIYTFNIRLHAYVATS 188
Query: 216 DLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGI-- 273
++E ME +L +ME+ I +D+ T+ + A+ Y+KA L++K+ +LK+AEE G
Sbjct: 189 NIEEMEKLLMKMETDSLINIDFHTFFAVANGYLKAGLLEKSIVMLKRAEELTVPMVGTTK 248
Query: 274 --GYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
Y L++LY S GNK V R+W+ K R N YI M+ +LM+LG+ + AE + +
Sbjct: 249 AHAYEMLLTLYGSAGNKDGVYRVWNSYKN-TGRIFNSTYICMINSLMRLGDIDGAEWISE 307
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
EW YD RIPN +I Y GL + AE + +VE G +SW +A GY G
Sbjct: 308 EWVSRKTLYDIRIPNTMIRAYSRKGLWKKAEEYVNKIVESGMQLEASSWDHLATGYHFGG 367
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL---GDEGSVQDVEAFVAALRTVIP 448
+ + + +K A+S + GWKP+P + + L L GDE + +++ FV+ V P
Sbjct: 368 QMAKAVETLKKAIS--ISKPGWKPNPYTLKTCLWYLESKGDEEAAEELLKFVSEHHPVSP 425
>gi|359485373|ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 461
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 256/446 (57%), Gaps = 6/446 (1%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
I ++LY I + +P I P L+ W++ G V +LQ ++R ++ +RF ALE+S
Sbjct: 19 IQISSLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQ 78
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQ 146
WM + P D A++LDLI VHG + AESYF+N+ ++ KT YGALL+ YVR++
Sbjct: 79 WMTDRRYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKS 138
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
+KA + +KM+EM A S+ YN ++ LYS+TG + K+ ++ EM++K I D F+ R
Sbjct: 139 VEKAEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRN 198
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
+ +Y A SD+ ME L ME PHI +DW+ Y+ AA Y+K LIDKA ++LKK E
Sbjct: 199 LMVAYVAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESN 258
Query: 267 LEQKDGI-GYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEE 325
+ + + FL+SLYA G+K E+ R+W+L K + + Y M+ L KL + E
Sbjct: 259 RPHLERLSAFKFLLSLYARTGHKQELYRVWNLYKPSYE--YPEAYSCMITCLTKLDDIEG 316
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
AEK+ +EWE YD R+ N ++ YC L AE+++ ++E+ + ++W ++A
Sbjct: 317 AEKIFQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEE-RMPYASTWNILAK 375
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
GY + + + + +K A+S V KGW+P+ ++ + + L +G+++++E +
Sbjct: 376 GYVEDKQMPKAVEMLKKAIS--VGRKGWRPNSIILDACIEYLEGQGNLEEIEEIARLCKN 433
Query: 446 VIPMNRQMYHAFIKANIRNGKGVDEL 471
+ + ++H ++ + K V +
Sbjct: 434 LGIPDGDIHHRLLRTSAAGEKSVSAI 459
>gi|359480173|ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 156/464 (33%), Positives = 259/464 (55%), Gaps = 4/464 (0%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
+ + LY +S LG G + L+ +K G + EL I+ LRK ++F ALE+ D
Sbjct: 41 VRQPRLYHRLSALGATGGSVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMD 100
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQ 146
WM + I F+ D+AV+LDL+ + G +AE YF+NL K TYG LLNCY +++
Sbjct: 101 WMENRKI-FFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKM 159
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
+KAL+ F KM E+ A ++LT+N++M L+ + G+ E VP ++ EMK ++I PD F+Y I
Sbjct: 160 EEKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNI 219
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
+ SY +D+EG E +L E++ + L W+TY++ A Y+ A L +KA LKK EE
Sbjct: 220 LMQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEE 279
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+ D + Y+FLISLYA + N SEV R+W+ K+A + N Y ML+AL L + +
Sbjct: 280 MGFHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGL 339
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
+ +EW+ S S+D R+ N + + ++++AE+IL + V++ + + A
Sbjct: 340 KICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAH 399
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV 446
+ + + + M+AA S V+ W+P P+ + + L +E V+ E F L+ +
Sbjct: 400 HLKVREIDTALKYMEAAAS-EVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKNI 458
Query: 447 IPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
++ Y ++ + G+ E+ MK D I+ D +K++L
Sbjct: 459 SGLDSNAYQLLLQTXVAAGRTEPEMRKRMKEDDIEVD--SKDLL 500
>gi|449438486|ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
gi|449479168|ref|XP_004155524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 500
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 264/454 (58%), Gaps = 12/454 (2%)
Query: 42 PGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH 101
P + P L+ WV +G + ELQ ++ ++ +RF+ ALE+S WM + +P D
Sbjct: 48 PKISVVPVLEKWVGDGRAIGKPELQYLVHLMKDSRRFNHALEISQWMTDRRYLSLSPSDA 107
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
AV+LDLI VHG AE+YF+++ KT YGALL CYVR++ +KA + ++M++MG
Sbjct: 108 AVRLDLIHSVHGLEHAENYFNSISIRLKTSNVYGALLGCYVREKSLEKAEAIMQEMRKMG 167
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
IA ++ YN ++ LY++ GQ++K+ ++ EMK K I D +S R +Y A++D+ GME
Sbjct: 168 IATTSFAYNVLINLYAQIGQHDKIDLLIEEMKTKGIPQDIYSIRNLCAAYVAKADISGME 227
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE-QKDGIGYNFLIS 280
IL+ +E + DW+ Y+ AA+ Y+ A L +A +LKK EE++ + + FL+S
Sbjct: 228 KILKRIEEDSELKADWTIYSIAANGYLTAGLETEALSMLKKTEEKVRPNTNKFAFKFLLS 287
Query: 281 LYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
LY G+K+EV R+W+ K K Y M+ +L KL + E AE++ +EWE Y
Sbjct: 288 LYERTGHKNEVYRVWNTFKPLTKETC-VPYALMITSLAKLDDIEGAERIFQEWESKCTVY 346
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAIL-EDLVEKGKATTP--NSWAVVAAGYFDAGKTERGF 397
D R+ N +++ YC GL+ AE+++ + +VE+ TP ++W+++A GY + G +
Sbjct: 347 DFRVLNRLLVAYCRKGLLDKAESVVNQAVVER----TPFRSTWSILATGYAEYGHMSKAV 402
Query: 398 QCMKAALSVYVEGKGWKPDP-KVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHA 456
+ +K A + V + WKP ++ + L L +G + ++ V ++ + ++MY+
Sbjct: 403 EMLKKA--ILVGRQNWKPKQGDILEACLDYLEKQGDAETMDEIVRLCKSSGTVMKEMYYR 460
Query: 457 FIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
++ +I GK V +L+ MK DG DEE +IL
Sbjct: 461 LLRTSIAGGKPVISILEQMKMDGFAADEEVDKIL 494
>gi|302143278|emb|CBI21839.3| unnamed protein product [Vitis vinifera]
Length = 501
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 252/437 (57%), Gaps = 6/437 (1%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
I ++LY I + +P I P L+ W++ G V +LQ ++R ++ +RF ALE+S
Sbjct: 19 IQISSLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQ 78
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQ 146
WM + P D A++LDLI VHG + AESYF+N+ ++ KT YGALL+ YVR++
Sbjct: 79 WMTDRRYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKS 138
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
+KA + +KM+EM A S+ YN ++ LYS+TG + K+ ++ EM++K I D F+ R
Sbjct: 139 VEKAEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRN 198
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
+ +Y A SD+ ME L ME PHI +DW+ Y+ AA Y+K LIDKA ++LKK E
Sbjct: 199 LMVAYVAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESN 258
Query: 267 LEQKDGI-GYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEE 325
+ + + FL+SLYA G+K E+ R+W+L K + + Y M+ L KL + E
Sbjct: 259 RPHLERLSAFKFLLSLYARTGHKQELYRVWNLYKPSYE--YPEAYSCMITCLTKLDDIEG 316
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
AEK+ +EWE YD R+ N ++ YC L AE+++ ++E+ + ++W ++A
Sbjct: 317 AEKIFQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEE-RMPYASTWNILAK 375
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
GY + + + + +K A+S V KGW+P+ ++ + + L +G+++++E +
Sbjct: 376 GYVEDKQMPKAVEMLKKAIS--VGRKGWRPNSIILDACIEYLEGQGNLEEIEEIARLCKN 433
Query: 446 VIPMNRQMYHAFIKANI 462
+ + ++H F N
Sbjct: 434 LGIPDGDIHHRFSSLNF 450
>gi|357131918|ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 545
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 164/458 (35%), Positives = 260/458 (56%), Gaps = 17/458 (3%)
Query: 32 LYSIISPLGNPGT-RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
LY +S LGN G + L+ WV+ G + R +L+R +++LRK KR +QALE+ DWM
Sbjct: 80 LYRRLSALGNAGEGSVSRVLNKWVREGREARSVDLERYVKELRKYKRHAQALELMDWMVH 139
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
+ +HA++LDL+ +V G +AE YF+ L D K ++TYGALLNCY ++ +KA
Sbjct: 140 TKGMNMSYTNHAIRLDLVYKVRGIEAAEKYFNGLPDPAKNHRTYGALLNCYCSSKKEEKA 199
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
F KM ++GIA STL +N++M LY K GQ++KV + EMKAKN+ PDN + + + S
Sbjct: 200 TDLFHKMDDLGIASSTLPFNNLMSLYMKLGQHKKVAGLFEEMKAKNVKPDNLTCCVLMTS 259
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
Y A + ++ +E +L+EME + + L WS Y++ A Y+ A L++KA LKK E ++ +
Sbjct: 260 YAALNKIDAVEEVLKEMEEK-NAALGWSAYSTLASIYVSAGLVEKAESALKKLEGLVQPR 318
Query: 271 DG-IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
DG ++FL+SLYAS+GN SEV R+WD+ K + N Y +ML+AL KL + + +++
Sbjct: 319 DGRQPFDFLMSLYASVGNLSEVNRVWDVVKATFPKVTNTSYFSMLQALYKLNDADRIKQI 378
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
+EWE + YD ++ N + + NGL + AE + E KG + + Y
Sbjct: 379 FEEWESNHECYDVKLTNIMTRAHLKNGLTKEAELLWEKAKAKGADFDSKTCELFLDHYM- 437
Query: 390 AGKTERGFQCMKAALSVYVEG------KGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
G + MK+AL +VE K K D + I ++ VQ E + L
Sbjct: 438 ------GTEDMKSALH-WVENVTKLPKKAGKLDQEKIQKFSKYFEEQKDVQGAEKLCSCL 490
Query: 444 RTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGID 481
RT+ ++ ++Y + ++ + G+ L +K D I+
Sbjct: 491 RTLGCIDGKVYESLLRTYLAAGETNHSLRQQIKDDKIE 528
>gi|297832672|ref|XP_002884218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330058|gb|EFH60477.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 258/457 (56%), Gaps = 11/457 (2%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
TL ++ G+P I LD W+ G+ V+ EL II+ LRK RFS AL++SDWM+
Sbjct: 40 TLQRRVARAGDPSASIIRVLDGWLDQGHLVKTSELHGIIKMLRKFSRFSHALQISDWMSE 99
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
+ D A++LDLI +V G AE +F + + + Y YGALLNCY ++ KA
Sbjct: 100 HRVHEITEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKA 159
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
F++MKE+G L YN ++ LY +TG+Y V +L EM+ + PD F+ +++
Sbjct: 160 EQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDGTVKPDIFTVNTRLHA 219
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE-Q 269
Y A SD+EGME L E+ + LDW TYA A+ YIKA L +KA ++L+K+E+ + +
Sbjct: 220 YSAVSDVEGMEKFLMRCEADTGLHLDWRTYADTANGYIKAGLTEKAIEMLRKSEQMVNPR 279
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
K Y L+S Y + G K EV RLW L K Y N YI+++ AL+K+ + EE EK+
Sbjct: 280 KRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFY-NTGYISVISALLKMDDIEEVEKI 338
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
++EWE + +D RIP+ +I GYC G+++ AE ++ LV+K + ++W +A GY
Sbjct: 339 MEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNMLVQKWRVEDTSTWERLALGYKM 398
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
AG+ E+ + K A+ V GW+P V+ S + L EG +D+E+ LR +
Sbjct: 399 AGEMEKAVEKWKRAID--VSKPGWRPHQVVLMSCVDYL--EGR-RDMESLRKILRLLSER 453
Query: 450 NRQMYHAFIKANIRNGKGVD-ELLDSM-KADGIDEDE 484
Y + NG G+ +++D+M K I+E E
Sbjct: 454 GHISYDQLLYDM--NGAGLSWKIVDAMGKGRYIEEGE 488
>gi|255553773|ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542909|gb|EEF44445.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 254/461 (55%), Gaps = 7/461 (1%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
LY I + +P I P L+ WV G+ V LQ ++ ++ KRF+ ALE+S WM
Sbjct: 50 LYDRIQIVRDPKESIIPVLNQWVSEGHTVGKALLQSLVHLMKGYKRFNHALEMSHWMTDC 109
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
+P D AV+L+LI RV+G AE YF + D K+ YGALL+ YVR+ KA
Sbjct: 110 RYFSLSPSDVAVRLELIYRVYGSAHAEMYFEKISDKLKSGNVYGALLSGYVRENSVQKAE 169
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP-DNFSYRICINS 210
+ ++M+E GIA S+ YN ++ LY++ G +EK+ D+L E +N P D ++ R + +
Sbjct: 170 AVLQEMREKGIATSSFPYNIMINLYAQNGAFEKI-DILKEEMERNGIPQDKYTMRNLMAA 228
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE-Q 269
Y A SD+ GME IL ++E+ P + W Y+ AA Y+K LI+KA +L+K EE +
Sbjct: 229 YVAASDISGMERILNQLETHPQLGHGWQAYSVAASGYLKVGLIEKALKMLRKMEETMPIG 288
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
K +N+L++LYA G K E+ R+W+ K + + M+ +L K+ + E AE++
Sbjct: 289 KKTSAFNYLLTLYAKTGRKDELYRVWNSYKPLAE-VKETQFCCMISSLEKVDDIEGAERI 347
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
+EWE YD R+ N +++ YC GL +G+ ++W +A Y
Sbjct: 348 FEEWESQCMMYDFRVLNKLLLAYCRKGLY-TKAEAAFKKAAEGRTPYASTWITMAMSYIG 406
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
+ + + +K A+S V KGWKP+P +T+ L L ++G V+ +E V +L++ +
Sbjct: 407 QNQMSKAVEMLKKAIS--VSRKGWKPNPITLTTCLDYLEEQGDVEGIEEIVKSLKSTESL 464
Query: 450 NRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
R +YH ++ G V +++D MK D I DEET +IL
Sbjct: 465 TRDIYHRLVRTYTAAGIPVTKVIDKMKMDNIAADEETHKIL 505
>gi|224137116|ref|XP_002327026.1| predicted protein [Populus trichocarpa]
gi|222835341|gb|EEE73776.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 253/470 (53%), Gaps = 8/470 (1%)
Query: 11 TQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIR 70
+Q+HN + I +Y IS + NP L+ W G ++ EL R+++
Sbjct: 50 SQVHNYGTVDYERRPMIKWNGIYRRISLMENPELGSGSVLNRWENEGKRLTKWELCRVVK 109
Query: 71 DLRKRKRFSQALEVSDWM-NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEK 129
+LRK KR+ QALEV DWM NR+ +P D A+QLDLI +V G +AE +F +L + K
Sbjct: 110 ELRKYKRYQQALEVYDWMKNRQERFRLSPSDAAIQLDLIAKVRGVSTAEDFFLSLPNTFK 169
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ YGALLN YV+ R +KA + F +M++ G L +N M LY +Y+KV ++
Sbjct: 170 DRRVYGALLNAYVQNRMREKAETLFDEMRDKGYVTHALPFNVTMTLYMNIKEYDKVDLMI 229
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+EM KNI D +SY I ++S G++ + ME + +M+S I +W+T+++ A YIK
Sbjct: 230 SEMNEKNIKLDIYSYNIWLSSCGSQGSADKMEQVYEQMKSDRSINPNWTTFSTMATMYIK 289
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+KA D L++ E R+ +D I Y++L+SLY ++GNK EV R+W++ K+ N
Sbjct: 290 MGQFEKAEDCLRRVESRITGRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLG 349
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ +L++L + E AEK+ +EW SYD RI N I Y G + A++ + ++
Sbjct: 350 YHAIISSLVRLDDIEGAEKIYEEWLSIKTSYDPRIANLFIAAYVYQGNLDEAKSFFDHML 409
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E G N+W ++A G+ +T C+K A V K WKP+P +TS +
Sbjct: 410 EDGGKPNSNTWEILAQGHISERRTSEALSCLKEAF-VTPGSKSWKPNPANVTSFFKLCEE 468
Query: 430 EGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADG 479
E + + EA LR + + Y + + + DEL S K DG
Sbjct: 469 EADMANKEALEGFLRQSGHLKDKAYASLLGMPVTG----DEL--STKEDG 512
>gi|297809953|ref|XP_002872860.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
gi|297318697|gb|EFH49119.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
Length = 500
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 247/460 (53%), Gaps = 3/460 (0%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
++Y +S LG G ++E L+ V G V+ EL R +DLRK ++ +ALE+ +WM R
Sbjct: 39 SVYKKLSSLGTRGGKMEETLNQLVMEGVPVKKHELIRYAKDLRKFRQPQRALEIFEWMER 98
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
K I VF DHA++LDLI + G +AE+YF++L D K TYG+LLNCY +++ DKA
Sbjct: 99 KEI-VFTGSDHAIRLDLIAKTKGLEAAETYFNSLNDSIKNQSTYGSLLNCYCVEKEEDKA 157
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+HF M ++ ++L +N++M +Y + GQ EKVP ++ MK KNI P + +Y + I S
Sbjct: 158 KAHFENMVDLNHVSNSLPFNNLMAMYLRIGQSEKVPALVVAMKQKNITPCDITYSMWIQS 217
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
G+ DL+G+E +L EM+++ + W T+A+ A YIK L DKA + LK E ++
Sbjct: 218 CGSLKDLDGVEKVLDEMKAEGEGISSWDTFANLAAIYIKVGLYDKAEEALKSLENKMNPH 277
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
Y+FLISLYA + N SEV R+WDL K N Y+TML+AL KL + + +K+
Sbjct: 278 IRDCYHFLISLYAGIANASEVYRVWDLLKKRHPNVNNSSYLTMLQALSKLNDIDGIKKIF 337
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
EWE + +YD R+ N I Y + + AEA+ + K K + ++
Sbjct: 338 TEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMTKCKGQFSKARQLLMMHLLKN 397
Query: 391 GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMN 450
+ + + +AA V K W ++I+S + V E F L P+
Sbjct: 398 DQADLALKHFEAA--VLDLDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLG 455
Query: 451 RQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ Y +K + K ++ ++ GI DEE +L
Sbjct: 456 SETYTLLMKTYLSAEKACPDMKKRLEEQGIQVDEEQDCLL 495
>gi|242039187|ref|XP_002466988.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
gi|241920842|gb|EER93986.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
Length = 510
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 160/463 (34%), Positives = 252/463 (54%), Gaps = 9/463 (1%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
LY I +G P + P L W + G+ V+ +Q I++ L +RF+ ALE+S WM +
Sbjct: 45 LYRRIMNVGRPSIPLSPVLKQWDQEGHTVKKFVIQAIVKKLVGLRRFAHALELSFWMTDR 104
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
D A +LDLI +VHG A YF + + Q YG+LL CYV + DKA
Sbjct: 105 RHLHLTAGDVAYRLDLISKVHGLEKAVEYFGMVPKRLRMPQCYGSLLKCYVEAKAVDKAE 164
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
HF KM+EMG+ S+ TY +M LY +TGQ E+V + +M+ K + PD FS + +Y
Sbjct: 165 EHFAKMQEMGMK-SSYTYTSMMKLYLETGQLERVHAMFQDMEEKGVKPDTFSVESMLAAY 223
Query: 212 GARSDLEGMEIILREMESQPH-IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
A D+EG+ +L ++ PH ++ W A AA ++K+ + +A L +AE R+ K
Sbjct: 224 IAAEDVEGVGKVLD--KANPHEKLVKWHGQALAASLFMKSGMQVRAVMALLEAERRISPK 281
Query: 271 DG-IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
I Y FL+ Y LG EV R+W + K+ N Y++ + AL+K+ + + AE
Sbjct: 282 SSRIAYAFLLKTYTDLGMYPEVGRIWSVYKSKVPPS-NTMYLSRISALLKMNDIDGAEAT 340
Query: 330 LKEWE-LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
LKEWE +S +D R+ N ++ YC GLV+ A A+++D ++KG+ N+W +A G+F
Sbjct: 341 LKEWETVSLRYHDFRLINLMVDAYCREGLVEKAVALVDDAIKKGRTPYANTWYKLAGGFF 400
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
G+ + + AL WKPD + L ++ V+ E + L+ + P
Sbjct: 401 KTGEVSKAVDMTRKALESATP--PWKPDLTNVLMSLEHFMNQKDVEAAEEIASMLQKLGP 458
Query: 449 MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
+ +++YH +K +R GK V +LL+ MK DG++ DEET+ + V
Sbjct: 459 LTKEVYHCLLKTYVRAGKPVSDLLERMKKDGLEADEETERMRV 501
>gi|224130976|ref|XP_002320971.1| predicted protein [Populus trichocarpa]
gi|222861744|gb|EEE99286.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 160/463 (34%), Positives = 250/463 (53%), Gaps = 7/463 (1%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
LY +S LG G + L+++V G K +L IR+LRK RF A+EV +WM ++
Sbjct: 15 LYKRLSELGASGESVSKTLNDFVLEGGKTNKVDLLACIRELRKYGRFDYAIEVMEWMQKR 74
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
+ V HAV LDLI + G +AE+YF L E+ + T+GALL+CY R+ ++KAL
Sbjct: 75 KMNV----SHAVYLDLIAKKEGIAAAENYFDGLSPSEQNHSTHGALLSCYCRELMSEKAL 130
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
+ F KM +M L++L +N+++ L+ + Q EKV ++ EMK K + P F+Y + + SY
Sbjct: 131 TLFEKMDKMKFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYNMWMQSY 190
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
G +D EG+E +L EM+ W+TY + A Y+KA DKA LKK EE++E+
Sbjct: 191 GCLNDFEGVERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESALKKVEEQIERDY 250
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
Y+FLI+LYA N EV R+W+ K+ N Y+TML L KL + E K K
Sbjct: 251 REAYHFLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKCFK 310
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
EWE S +SYD R+ N I + + + A I +D +++ + N+ + +
Sbjct: 311 EWESSCHSYDMRLANVAIRACLEHDMYEEAALIFDDALKRTEGLFFNAREMFMVFFLKNH 370
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR 451
+ + + MKAA S V+ W+P+PK +++ + DE V E L+ + ++
Sbjct: 371 QLDLALKHMKAAFS-EVKEIEWQPEPKTVSAFFAYFEDEKDVNGAERLCKILKHINRLDS 429
Query: 452 QMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL--VC 492
Y +K I GK E+ ++ DGI+ + E + +L VC
Sbjct: 430 NAYDLLLKTYIAAGKLAPEMRQRLEEDGIEINPELENLLERVC 472
>gi|195613552|gb|ACG28606.1| tetratricopeptide-like helical [Zea mays]
gi|414870858|tpg|DAA49415.1| TPA: tetratricopeptide-like helical [Zea mays]
Length = 517
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/468 (33%), Positives = 250/468 (53%), Gaps = 9/468 (1%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
LY I +G P + P L+ W + G+ + +Q I++ L +RF+ ALE+S WM +
Sbjct: 42 LYRRIMNVGRPSIPLSPVLEQWNQEGHTAKKFVIQAIVKKLVGLRRFAHALELSFWMTDR 101
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
+ D A +LDLI +VHG A YF + + Q YG+LL CYV + DKA
Sbjct: 102 RHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEAKAVDKAE 161
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
HF KM+EMG+ S+ Y +M LY +TGQ E+V + +M+ K + PD FS + +Y
Sbjct: 162 EHFAKMQEMGMT-SSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEAMLAAY 220
Query: 212 GARSDLEGMEIILREMESQPH-IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
A D++G+ +L ++ PH ++ W +ASAA ++K+ + A L +AE R+ K
Sbjct: 221 IAAEDVQGVGKVLD--KANPHEKLVTWHGHASAASLFMKSGMQVGAVMALVEAERRISPK 278
Query: 271 DG-IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
I Y FL+ Y LG +E R+W + K+ N Y++ L AL++ + + AE
Sbjct: 279 SSRIAYAFLLKTYTELGMHAEAGRIWSVYKSKVPP-CNTMYMSRLSALLRTNDIDGAEAT 337
Query: 330 LKEWELSGNSY-DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
LKEWE Y D R+ N ++ YC GLV+ A A+++ ++KG+ N+W +A G+F
Sbjct: 338 LKEWETVPLRYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYANTWYKLAGGFF 397
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
G+ + AL W+PD + L+ D+ V E V+ L+ ++P
Sbjct: 398 KTGQVPEAVDMTRKALDSAT--PPWRPDLANVLMSLNHFVDQKDVGAAEEMVSTLQKLVP 455
Query: 449 MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCTMEK 496
+ R +YH +K +R GK +LL+ MK DG++ DEET+ IL E+
Sbjct: 456 LTRDVYHCLLKTYVRAGKPPSDLLERMKEDGLEADEETERILAGECER 503
>gi|449458295|ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/469 (33%), Positives = 263/469 (56%), Gaps = 7/469 (1%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDW 87
N+ LY +S LG G + ++ ++ GN V+ EL++ I++LRK +R+ L++ +W
Sbjct: 7 NQRGLYPRLSALGATGGSVAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCLQIMEW 66
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQT 147
M + I ++ D+A++LDLI +V+G +AE YF +L K TYGALLNCY ++
Sbjct: 67 METRKI-NYSFTDYALRLDLISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCYCKEMME 125
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
+KAL+ F+KM E+ I+ ++L++N++M +Y + EKVP ++ EMK + + F+Y +
Sbjct: 126 EKALTLFKKMDELKIS-TSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTYNVW 184
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
+NS + +D+ +E IL EM+ + DW+TY++ A FY+KA +KA LKK EE +
Sbjct: 185 MNSCASLNDIGKVEEILEEMKMEDRNKFDWTTYSNLASFYVKAGQFEKAELALKKLEEEM 244
Query: 268 --EQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEE 325
++ D + Y+ LISLYAS N SEV R+W+ K+ N Y+ ML+AL KL + E
Sbjct: 245 KSDKNDRLVYHCLISLYASTSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLKDIEG 304
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
++ KEWE + ++D RI N +I Y + ++A I ED ++ K + +
Sbjct: 305 LKRTYKEWESNCRNFDLRIVNDIIGAYLQQDMYEDAAMIFEDATKRSKGPFSRAREMFMV 364
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
+ + + F +++ALS E K W P T+ L+ +E V+ E F L+
Sbjct: 365 YFLKLKQVDSAFSHLESALSESKE-KEWHPSLATTTAFLNYFEEEKDVEGAEDFARILKR 423
Query: 446 VIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL--VC 492
+ ++ YH +K + GK ++ +K D I+ E +E+L VC
Sbjct: 424 LKCLDASGYHLLLKTYVAAGKLAPDMRKRLKEDDIEISSELEELLGTVC 472
>gi|125532539|gb|EAY79104.1| hypothetical protein OsI_34210 [Oryza sativa Indica Group]
Length = 513
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 257/459 (55%), Gaps = 17/459 (3%)
Query: 40 GNPGTRIEPELDNW-VKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP 98
+P + P L+ W + + V ELQ +++ LR+R+RFSQALE+S WM + +P
Sbjct: 59 ADPRIPLAPVLEQWWLAEEHPVSKPELQSLVKYLRRRRRFSQALELSMWMTERRHLHLSP 118
Query: 99 CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
D A +L+LI +VHG A YF + + + Q YG+LL CY + +KA F M+
Sbjct: 119 GDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYTEAERVEKAEELFENMR 178
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
MG+A ++ YN +M LYS+ GQ E+V + M+ I PD F+ +++Y D+E
Sbjct: 179 GMGMA-NSYAYNAMMNLYSQIGQVERVHSMYKSMEEGGIVPDIFTIDNLVSAYADVEDVE 237
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL-EQKDG-IGYN 276
+E +L ++ + ++ W ++A ++KA + ++A +++E+R+ +KDG + Y
Sbjct: 238 AIEKVLE--KASCNNLMSWHSFAIVGKVFMKAGMQERALQAFQESEKRITARKDGRVAYG 295
Query: 277 FLISLYASLGNKSEVLRLWDLEK-----TACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
FL+++YA L SEV R+WD+ + +AC N Y+ + L+K+ + AEK +
Sbjct: 296 FLLTMYADLQMDSEVDRIWDVYRSKVPASAC----NTMYMCRISVLLKMNDIVGAEKAYE 351
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
EWE +D+R+ N ++ YC GL++ AEA+++ ++KG+ N+W +A GYF G
Sbjct: 352 EWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTPFSNTWYKLAGGYFKVG 411
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR 451
+ + K AL+ WKPD + ++ ++ +V+ E + L+ ++P+ R
Sbjct: 412 QASKAADLTKKALA--SASNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQRLVPLTR 469
Query: 452 QMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+YH +K + G+ +LLD MK DGI+ DEET +IL
Sbjct: 470 DVYHGLLKTYVNAGEPASDLLDRMKKDGIEADEETDKIL 508
>gi|326502008|dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 164/458 (35%), Positives = 255/458 (55%), Gaps = 17/458 (3%)
Query: 32 LYSIISPLGNPGT-RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
LY +S LGN G + L+ W++ G + R +L+R +++LR+ KR SQALE+ DWM
Sbjct: 86 LYRRLSALGNAGEGSVSAVLNKWLREGRETRSVDLERYVKELRRYKRHSQALELMDWMVH 145
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
+ +HA++LDLI +V G +AE YF L D K ++T+GALLNCY ++ +KA
Sbjct: 146 TKGMNMSYTNHAIRLDLIYKVRGLEAAEKYFEGLPDPAKNHRTFGALLNCYCSSKEEEKA 205
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+RKM E+GI+ STL N++M LY K GQ++KV + EMK KN+ PDN + I + S
Sbjct: 206 TDLYRKMDELGISSSTLPINNLMSLYMKLGQHKKVCSLFEEMKEKNVKPDNLTCCILMTS 265
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
A + ++ +E +L+EME + VL WS Y++ A Y A L++KA LKK E ++ +
Sbjct: 266 LAALNKIDDVEQVLKEMEEKDG-VLGWSAYSTLASIYQSAGLVEKAESALKKLEGLVQDR 324
Query: 271 DG-IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
DG ++FL+SLYAS+GN SEV R+W + K + N Y +ML+AL+KL + + ++V
Sbjct: 325 DGRQPFDFLMSLYASVGNLSEVKRVWGVVKATFPKVTNTSYFSMLQALLKLNDADYMKQV 384
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
+EWE + YD ++ N + + NG+ + AE + E EKG + + Y
Sbjct: 385 FEEWESNHEFYDAKLTNVMTRAHLKNGMAKEAELLWEKAKEKGACFDSKTCELFLDHYMV 444
Query: 390 AGKTERGFQCMKAALSVYVEG------KGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
AG MK+AL+ +VE K K D I ++ VQ E F L
Sbjct: 445 AGD-------MKSALN-WVENVTKLPKKTAKLDQDKIPKFSKYFEEQKDVQGAERFCRCL 496
Query: 444 RTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGID 481
R + ++ + Y + ++ + G+ L +K D I+
Sbjct: 497 RALGCIDGKAYESLLRTYLAAGETSRSLRQQIKDDKIE 534
>gi|224063635|ref|XP_002301239.1| predicted protein [Populus trichocarpa]
gi|222842965|gb|EEE80512.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 238/435 (54%), Gaps = 2/435 (0%)
Query: 11 TQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIR 70
+QIHN + + +Y IS + NP L+ W +G ++ EL R+++
Sbjct: 50 SQIHNYGTVDYERRPMMKWNAIYRRISLMENPELGSGSVLNQWENDGKRLTKWELCRVVK 109
Query: 71 DLRKRKRFSQALEVSDWMN-RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEK 129
+LRK KR+ QALEV DWMN R+ +P D A+QLDLI +V G SAE +F L + K
Sbjct: 110 ELRKYKRYQQALEVYDWMNNRQERFGLSPSDAAIQLDLIAKVRGVSSAEDFFLRLPNTFK 169
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ YGALLN YVR R +KA S +M+ L YN +M LY +Y+KV ++
Sbjct: 170 DRRIYGALLNAYVRNRMREKAESLIDEMRGKDYVTHALPYNVMMTLYMNINEYDKVDLII 229
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+EM KNI D +SY I ++S G + + ME + +M+S I +W+T+++ A YIK
Sbjct: 230 SEMNEKNIKLDIYSYNIWLSSCGLQGSADKMEQVFEQMKSDGSINPNWTTFSTMATMYIK 289
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+KA D L++ E R+ +D I Y++L+SLY ++GNK EV R+W++ K+ N
Sbjct: 290 MGKFEKAEDCLRRVESRITGRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLG 349
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y M+ +L+++ + E AEK+ +EW SYD RI N + + G + AE+ + ++
Sbjct: 350 YHAMISSLVRMDDIEGAEKIYEEWLSIKTSYDPRIANLFMAAFVYQGNLDKAESFFDHML 409
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E+G +SW ++A G+ +T C+K A + K WKP+P ++S +
Sbjct: 410 EEGGKPNSHSWEILAQGHISERRTSEALSCLKEAFAT-PGSKSWKPNPANVSSFFKLCEE 468
Query: 430 EGSVQDVEAFVAALR 444
E + EA + LR
Sbjct: 469 EVDMASKEALASFLR 483
>gi|22329290|ref|NP_171717.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806400|sp|Q8LPS6.2|PPR3_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g02150
gi|2317908|gb|AAC24372.1| Unknown protein [Arabidopsis thaliana]
gi|332189272|gb|AEE27393.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 524
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 242/430 (56%), Gaps = 4/430 (0%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
+Y IS + P L+ W K G K+ EL R++++LRK KR +QALEV DWMN
Sbjct: 68 AIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNN 127
Query: 91 KGICV-FAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
+G + D A+QLDLIG+V G AE +F L ++ K + YG+LLN YVR + +K
Sbjct: 128 RGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREK 187
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A + M++ G AL L +N +M LY +Y+KV ++ EMK K+I D +SY I ++
Sbjct: 188 AEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLS 247
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
S G+ +E ME++ ++M+S I +W+T+++ A YIK +KA D L+K E R+
Sbjct: 248 SCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITG 307
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
++ I Y++L+SLY SLGNK E+ R+W + K+ N Y ++ +L+++G+ E AEKV
Sbjct: 308 RNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKV 367
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
+EW +SYD RIPN ++ Y N ++ AE + + +VE G + ++W ++A G+
Sbjct: 368 YEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTR 427
Query: 390 AGKTERGFQCMKAALSVYVEGKG-WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
C++ A S EG W+P +++ +E V EA + LR
Sbjct: 428 KRCISEALTCLRNAFS--AEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGD 485
Query: 449 MNRQMYHAFI 458
+ + Y A I
Sbjct: 486 LEDKSYLALI 495
>gi|297743994|emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 146/420 (34%), Positives = 238/420 (56%), Gaps = 2/420 (0%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
+ + LY +S LG G + L+ +K G + EL I+ LRK ++F ALE+ D
Sbjct: 80 VRQPRLYHRLSALGATGGSVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMD 139
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQ 146
WM + I F+ D+AV+LDL+ + G +AE YF+NL K TYG LLNCY +++
Sbjct: 140 WMENRKI-FFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKM 198
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
+KAL+ F KM E+ A ++LT+N++M L+ + G+ E VP ++ EMK ++I PD F+Y I
Sbjct: 199 EEKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNI 258
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
+ SY +D+EG E +L E++ + L W+TY++ A Y+ A L +KA LKK EE
Sbjct: 259 LMQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEE 318
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+ D + Y+FLISLYA + N SEV R+W+ K+A + N Y ML+AL L + +
Sbjct: 319 MGFHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGL 378
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
+ +EW+ S S+D R+ N + + ++++AE+IL + V++ + + A
Sbjct: 379 KICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAH 438
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV 446
+ + + + M+AA S V+ W+P P+ + + L +E V+ E F L+ +
Sbjct: 439 HLKVREIDTALKYMEAAAS-EVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKNI 497
>gi|115436124|ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|57899052|dbj|BAD87826.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|215694668|dbj|BAG89859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706899|dbj|BAG93359.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 522
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 161/460 (35%), Positives = 263/460 (57%), Gaps = 19/460 (4%)
Query: 31 TLYSIISPLGNPGT-RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM- 88
+LY +S LG G + ++ WV+ G + R +L + +++LRK KR + ALE+ +WM
Sbjct: 56 SLYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMV 115
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
N KG+ + + +HA++LDLI +V G +AE YF+ L D K ++TYGALLNCY + D
Sbjct: 116 NTKGMNM-SYTNHAIRLDLIYKVRGIEAAEQYFAGLPDPGKNHKTYGALLNCYCSAKMED 174
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
KA +RKM E+GI+ STL N++M LY K GQ+ KV + EMK KN+ PDN + + +
Sbjct: 175 KATDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLM 234
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
+SY A + ++ + +L+EME + + L WS Y++ A Y+ AN++++A LKK E ++
Sbjct: 235 SSYAALNKIDTVGEVLKEME-EKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLID 293
Query: 269 QKDG-IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAE 327
+ G ++FL+SLYAS+GN SEV R+W+L K ++ N Y+ ML+AL KL + + +
Sbjct: 294 VQAGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMK 353
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
++ ++WE + +YD R+ N + + NGL + AE + E + EKG + + Y
Sbjct: 354 QIYEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFDSKTCELFLEHY 413
Query: 388 FDAGKTERGFQCMKAALSVYVEG------KGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
G M +AL+ +VE K K D + I+ L + V+ E F+
Sbjct: 414 MGKGD-------MTSALN-WVENMTKLPRKKSKLDQEKISCFLKYFEEHKDVEGAERFLN 465
Query: 442 ALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGID 481
LRT ++ + Y + ++ + GK + +K D I+
Sbjct: 466 CLRTSGCIDGKAYESLLRTYLAAGKTSRSIRQMIKEDKIE 505
>gi|20453085|gb|AAM19786.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
gi|29028736|gb|AAO64747.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
Length = 524
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 242/430 (56%), Gaps = 4/430 (0%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
+Y IS + P L+ W K G K+ EL R++++LRK KR +QA+EV DWMN
Sbjct: 68 AIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQAIEVYDWMNN 127
Query: 91 KGICV-FAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
+G + D A+QLDLIG+V G AE +F L ++ K + YG+LLN YVR + +K
Sbjct: 128 RGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREK 187
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A + M++ G AL L +N +M LY +Y+KV ++ EMK K+I D +SY I ++
Sbjct: 188 AEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLS 247
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
S G+ +E ME++ ++M+S I +W+T+++ A YIK +KA D L+K E R+
Sbjct: 248 SCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITG 307
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
++ I Y++L+SLY SLGNK E+ R+W + K+ N Y ++ +L+++G+ E AEKV
Sbjct: 308 RNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKV 367
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
+EW +SYD RIPN ++ Y N ++ AE + + +VE G + ++W ++A G+
Sbjct: 368 YEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTR 427
Query: 390 AGKTERGFQCMKAALSVYVEGKG-WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
C++ A S EG W+P +++ +E V EA + LR
Sbjct: 428 KRCISEALTCLRNAFS--AEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGD 485
Query: 449 MNRQMYHAFI 458
+ + Y A I
Sbjct: 486 LEDKSYLALI 495
>gi|255573975|ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532680|gb|EEF34462.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 490
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 258/467 (55%), Gaps = 5/467 (1%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
LY + G+ ++ +L+ ++K+ +V E+ ++ LR R + AL++S+ M++
Sbjct: 24 ALYFRLFKEGSSEVKVREQLNQFLKSSKRVYKWEVGDTLKKLRSRGLYYPALKLSEAMSK 83
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
+G+ D A+ LDL+ + G +AE +F +L + K + TYGALLNCY Q T++A
Sbjct: 84 RGMNK-TVSDQAIHLDLVAKTRGIPAAEIFFIDLPETSKNHLTYGALLNCYCNQLMTEEA 142
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+ KMKE+ + LS+++YN +M LY+K GQ E++P ++ EMK+ +I PD+++Y + + +
Sbjct: 143 EALMEKMKELNLGLSSMSYNSLMTLYTKIGQPERIPGIIQEMKSDSIMPDSYTYNVWMRA 202
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
A +D+ G E ++ EM+ + DW+TY++ A Y+ A L +KA LK+ E+R +
Sbjct: 203 LAAVNDISGAERVIEEMKRDGRVAADWTTYSNLASIYVDAQLFEKAEKTLKELEKRNVHR 262
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
D + FLI+LY +GN E+ R+W + A + N Y+ M++ L+ L + AEK
Sbjct: 263 DHSAFQFLITLYGRIGNLHELYRIWRSLRLAFPKTSNISYLNMIQVLVNLKDLPGAEKCF 322
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+EWE + + YD R+ N +I Y GL++ AE + E + +G +W + + YF+
Sbjct: 323 REWESNCSGYDIRVANVLIKAYAKKGLLEKAEELKERAIGRGAKPNAKTWEIFSDYYFEN 382
Query: 391 GKTERGFQCMKAALSV-YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVI-P 448
G + +C+ A+S +G+ W P P+V+ S ++ + V E F+ L+
Sbjct: 383 GDIKLSVECLANAISKGRGDGQKWIPSPEVVASFMAHFEQQKDVDGAEGFIEILKKATDD 442
Query: 449 MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL--VCT 493
+ ++ + I+ G+ L +K + ++ E +++L +C
Sbjct: 443 VEANVFESLIRTYAAAGRTSQVLRRRLKMENVEVSEAGQKLLEMICV 489
>gi|225468646|ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/462 (31%), Positives = 259/462 (56%), Gaps = 3/462 (0%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
LY + G+ + +L++++K+ +V E+ ++ LR RKRF AL++S+ M +
Sbjct: 23 ALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSETMAK 82
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
+G+ + D A+ LDLI + G +AE+YF +L + K + TYGALLNCY ++ T+KA
Sbjct: 83 RGMNM-TISDQAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLTEKA 141
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+ +MKE+ + LS++ YN +M LY+K GQ EK+P ++ E+K+ +I PD+++Y I + +
Sbjct: 142 EALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRA 201
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
A +D+ G+E ++ EM+ + DW+TY++ A Y+ A + +KA LK+ E+R +
Sbjct: 202 LAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEKRNACR 261
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
D + FLI+LY +GN EV R+W + A + N Y+ M++ L+ L + AEK
Sbjct: 262 DLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCF 321
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+EWE + YD R+ NA+I Y +GL++ AE + E +G +W + A +
Sbjct: 322 REWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKPNAKTWEIFLAYHLKN 381
Query: 391 GKTERGFQCMKAALSV-YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR-TVIP 448
+ ++ C+ A+S +G+ W P P++I + E V E F+ L+ TV
Sbjct: 382 REMKQAVDCVANAISTGRGDGQKWVPSPEIIGVFMQHFEQEKDVDGAEGFLEILKSTVED 441
Query: 449 MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ +++ + I+ G+ + +K + ++ + K++L
Sbjct: 442 LGVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVSDSCKKLL 483
>gi|388517969|gb|AFK47046.1| unknown [Lotus japonicus]
Length = 496
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 250/423 (59%), Gaps = 6/423 (1%)
Query: 10 NTQIHNAVFSRFYYTNR-INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRI 68
N + + F +Y T ++ + L + + G+P T + P L+ WV+ G + +LQR+
Sbjct: 13 NMSLVSRPFPLYYSTEAPVDFSALETRVLKSGDPRTPMAPILNQWVEGGGDITQIQLQRL 72
Query: 69 IRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE 128
I L +RF+ AL+VS+WM+ + + A ++ LI +VHG AE +F + DD+
Sbjct: 73 ITRLAYFRRFTHALQVSEWMSNERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDK 132
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
+ ++ Y +LL+CY + ++A + +K+KE+ T+ YN ++ LY++ G+YEK+ +
Sbjct: 133 RGFKIYASLLSCYAEHKSLEEAEAIMKKIKELRPMHLTVCYNILLKLYAQKGKYEKLDRL 192
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
+ EMK +N + ++ I +N+Y A D+EGME +L +ME+ P +DW TY++AA+ Y+
Sbjct: 193 MQEMK-ENDLCNGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYL 251
Query: 249 KANLIDKASDVLKKAEERLE-QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
KA ++KA LKK+E+ ++ +K + Y L S YA++GNK EV RLW+ K + N
Sbjct: 252 KAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIKN-LQNCWN 310
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
YI ML +L+KL + + AEK+L EWE ++DTRIPN +I YC GL+ AEA ++
Sbjct: 311 SSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQK 370
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
L++ GK +SW +AAGY E+ Q MK A + GW+P P + + ++ L
Sbjct: 371 LLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKA--ILANRPGWRPSPSTLVACITYL 428
Query: 428 GDE 430
++
Sbjct: 429 KEK 431
>gi|125525544|gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
Length = 522
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/460 (35%), Positives = 263/460 (57%), Gaps = 19/460 (4%)
Query: 31 TLYSIISPLGNPGT-RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM- 88
+LY +S LG G + ++ WV+ G + R +L + +++LRK KR + ALE+ +WM
Sbjct: 56 SLYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMV 115
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
N KG+ + + +HA++LDLI +V G +AE YF+ L D K ++TYGALLNCY + D
Sbjct: 116 NTKGMNM-SYTNHAIRLDLIYKVRGIEAAELYFAGLPDPGKNHKTYGALLNCYCSAKMED 174
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
KA +RKM E+GI+ STL N++M LY K GQ+ KV + EMK KN+ PDN + + +
Sbjct: 175 KATDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLM 234
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
+SY A + ++ + +L+EME + + L WS Y++ A Y+ AN++++A LKK E ++
Sbjct: 235 SSYAALNKIDTVGEVLKEME-EKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLID 293
Query: 269 QKDG-IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAE 327
+ G ++FL+SLYAS+GN SEV R+W+L K ++ N Y+ ML+AL KL + + +
Sbjct: 294 VQAGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMK 353
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
++ ++WE + +YD R+ N + + NGL + AE + E + EKG + + Y
Sbjct: 354 QIYEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFDSKTCELFLEHY 413
Query: 388 FDAGKTERGFQCMKAALSVYVEG------KGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
G M +AL+ +VE K K D + I+ L + V+ E F+
Sbjct: 414 MGKGD-------MTSALN-WVENMTKLPRKKSKLDQEKISCFLKYFEEHKDVEGAERFLN 465
Query: 442 ALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGID 481
LRT ++ + Y + ++ + GK + +K D I+
Sbjct: 466 CLRTSGCIDGKAYESLLRTYLAAGKTSRSIRQMIKEDKIE 505
>gi|297848282|ref|XP_002892022.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337864|gb|EFH68281.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 523
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 242/430 (56%), Gaps = 4/430 (0%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
+Y IS + P L+ W K G K+ EL R++++LRK KR +QALEV DWMN
Sbjct: 67 AIYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNN 126
Query: 91 KGICV-FAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
+G + D A+QLDLIG+V G AE +F L ++ K + YG+LLN YVR + +K
Sbjct: 127 RGERFRLSASDAAIQLDLIGKVRGISDAEQFFLTLPENFKDRRVYGSLLNAYVRAKSREK 186
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A + M++ G AL L +N +M LY +Y+KV ++ EMK K+I D +SY I ++
Sbjct: 187 AEALLHTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLS 246
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
S G+ +E ME++ ++M+S I +W+T+++ A YIK +KA D L+K E R+
Sbjct: 247 SCGSLGSVEKMELVYQQMKSDVSINPNWTTFSTMATMYIKMGETEKAEDALRKVEARITG 306
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
++ I Y++L+SLY S+GNK E+ R+W++ K+ N Y ++ +L ++G+ E AEKV
Sbjct: 307 RNRIPYHYLLSLYGSVGNKKELYRVWNVYKSVVPSIPNLGYHALVSSLARMGDIEGAEKV 366
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
+EW +SYD RIPN ++ Y N ++ AE + + +VE G + ++W ++A G+
Sbjct: 367 YEEWLPVKSSYDPRIPNLLMNVYVKNDQLEKAEGLFDHMVEMGGKPSSSTWEILADGHTR 426
Query: 390 AGKTERGFQCMKAALSVYVEGKG-WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
C++ A S EG W+P +++ +E V EA + LR
Sbjct: 427 KRCIPEALTCLRKAFS--AEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGH 484
Query: 449 MNRQMYHAFI 458
+ + Y A I
Sbjct: 485 LEDKAYQALI 494
>gi|115482784|ref|NP_001064985.1| Os10g0501300 [Oryza sativa Japonica Group]
gi|22165054|gb|AAM93671.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432901|gb|AAP54477.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639594|dbj|BAF26899.1| Os10g0501300 [Oryza sativa Japonica Group]
Length = 513
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 255/459 (55%), Gaps = 17/459 (3%)
Query: 40 GNPGTRIEPELDNW-VKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP 98
+P + P L+ W + V ELQ +++ LR+R RFSQALE+S WM + +P
Sbjct: 59 ADPRIPLAPVLEQWWLAEERPVSKPELQSLVKYLRRRCRFSQALELSMWMTERRHLHLSP 118
Query: 99 CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
D A +L+LI +VHG A YF + + + Q YG+LL CY + +KA F M+
Sbjct: 119 GDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYAEAERVEKAEELFENMR 178
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
MG+A ++ YN +M LYS+ GQ E+V + M+ I PD F+ +++Y D+E
Sbjct: 179 GMGMA-NSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPDIFTIDNLVSAYADVEDVE 237
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL-EQKDG-IGYN 276
+E +L ++ + ++ W ++A ++KA + ++A +++E+R+ +KDG + Y
Sbjct: 238 AIEKVLE--KASCNNLMSWHSFAIVGKVFMKAGMQERALQAFQESEKRITARKDGRVAYG 295
Query: 277 FLISLYASLGNKSEVLRLWDLEK-----TACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
FL+++YA L SEV R+WD+ + +AC N Y+ + L+K+ + AEK +
Sbjct: 296 FLLTMYADLQMDSEVDRIWDVYRSKVPASAC----NTMYMCRISVLLKMNDIVGAEKAYE 351
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
EWE +D+R+ N ++ YC GL++ AEA+++ ++KG+ N+W +A GYF G
Sbjct: 352 EWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTLFSNTWYKLAGGYFKVG 411
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR 451
+ + K AL+ WKPD + ++ ++ +V+ E + L+ ++P+ R
Sbjct: 412 QVSKAADLTKKALA--SASNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQRLVPLTR 469
Query: 452 QMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+YH +K + G+ +LLD MK DGI+ DEET +IL
Sbjct: 470 DVYHGLLKTYVNAGEPASDLLDRMKKDGIEADEETDKIL 508
>gi|15219808|ref|NP_176276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097554|sp|O22714.1|PPR86_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g60770
gi|2462744|gb|AAB71963.1| Hypothetical protein [Arabidopsis thaliana]
gi|27754491|gb|AAO22693.1| unknown protein [Arabidopsis thaliana]
gi|28393975|gb|AAO42395.1| unknown protein [Arabidopsis thaliana]
gi|332195609|gb|AEE33730.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/464 (31%), Positives = 251/464 (54%), Gaps = 9/464 (1%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
LY+ + G ++ +L+ ++K V E+ I+ LR R + AL++S+ M +
Sbjct: 25 LYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVMEER 84
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
G+ D A+ LDL+ + + E+YF +L + KT TYG+LLNCY ++ T+KA
Sbjct: 85 GMNKTV-SDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAE 143
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
KMKE+ I S+++YN +M LY+KTG+ EKVP ++ E+KA+N+ PD+++Y + + +
Sbjct: 144 GLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRAL 203
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
A +D+ G+E ++ EM + DW+TY++ A Y+ A L KA L++ E + Q+D
Sbjct: 204 AATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRD 263
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
Y FLI+LY LG +EV R+W + A + N Y+ M++ L+KL + AE + K
Sbjct: 264 FTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFK 323
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
EW+ + ++YD RI N +I Y GL+Q A + E +G +W + Y +G
Sbjct: 324 EWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSG 383
Query: 392 KTERGFQCMKAALSVYVEGKG----WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVI 447
R +CM A+S+ GKG W P P+ + +++S + V E + L+
Sbjct: 384 DMARALECMSKAVSI---GKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGT 440
Query: 448 P-MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ +++ I+ GK + +K + ++ +E TK++L
Sbjct: 441 DNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLL 484
>gi|356522970|ref|XP_003530115.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 546
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 259/489 (52%), Gaps = 10/489 (2%)
Query: 3 PKLKLSTN---TQIHNAVFSRFYYTNR--INKTTLYSIISPLGNPGTRIEPELDNWVKNG 57
P+L + T ++IH+ + Y R + +Y IS NP L+ W G
Sbjct: 51 PRLSVVTTCSISKIHS--YGTVDYERRPIVGWNDVYRRISLNPNPQVGSAEVLNQWENEG 108
Query: 58 NKVRVGELQRIIRDLRKRKRFSQALEVSDWMN-RKGICVFAPCDHAVQLDLIGRVHGFLS 116
+ EL R++++LRK KRF +ALEV DWMN R + D A+QLDLI +V G S
Sbjct: 109 RHLTKWELSRVVKELRKYKRFRRALEVYDWMNNRPERFRVSESDAAIQLDLIAKVRGLSS 168
Query: 117 AESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLY 176
AE++F +L+D K +TYGALLN YV R +KA S F M+ G + L +N +M LY
Sbjct: 169 AEAFFLSLEDKLKDKKTYGALLNVYVHSRSKEKAESLFDTMRSKGYVIHALPFNVMMTLY 228
Query: 177 SKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLD 236
+Y KV + +EM KNI D ++Y I ++S G++ +E ME + +ME P I+ +
Sbjct: 229 MNLNEYAKVDILASEMMEKNIQLDIYTYNIWLSSCGSQGSVEKMEQVFEQMEKDPSIIPN 288
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
WST+++ A YI+ + +KA + L+K E R++ +D I +++L+SLY S+G K EV R+W+
Sbjct: 289 WSTFSTMASMYIRMDQNEKAEECLRKVEGRIKGRDRIPFHYLLSLYGSVGKKDEVCRVWN 348
Query: 297 LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
K+ N Y ++ +L+KL + E AEK+ +EW +SYD RI N +I Y G
Sbjct: 349 TYKSIFPSIPNLGYHAIISSLVKLDDIEVAEKLYEEWISVKSSYDPRIGNLLIGWYVKKG 408
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
A + E ++ G N+W +++ G+ + C+K A K W+P
Sbjct: 409 DTDKALSFFEQMLNDGCIPNSNTWEILSEGHIADKRISEAMSCLKEAFMAAGGSKSWRPK 468
Query: 417 PKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDS 474
P +++ L ++ ++ E + LR ++Y + I ++ K D D+
Sbjct: 469 PSYLSAFLELCQEQDDMESAEVLIGLLRQSKFNKSKVYASLIGSSDELPKIDTADRTDDA 528
Query: 475 MKADGIDED 483
+ ++ +D D
Sbjct: 529 VDSENMDND 537
>gi|255548417|ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545745|gb|EEF47249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 156/465 (33%), Positives = 251/465 (53%), Gaps = 6/465 (1%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
LY +S LG G + L+ + G + EL R IR+LRK +RF A E+ +WM ++
Sbjct: 40 LYHKLSALGATGGSVSRTLNEHIMEGKTITKIELSRCIRELRKYRRFDHAFEIMEWMEKR 99
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT-YGALLNCYVRQRQTDKA 150
+ F+ D A++LDLIG+ G +AE YF+ L K + T YGALLNCY ++ +DKA
Sbjct: 100 KM-NFSYADRAIRLDLIGKARGIAAAEDYFNGLSPSAKNHHTSYGALLNCYCKELMSDKA 158
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
L+ F++M E S+L +N++M +Y + GQ EKVP ++ EMK + + P +F+Y I + S
Sbjct: 159 LALFQEMDEKKFLYSSLPFNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFTYNIWMQS 218
Query: 211 YGARSDLEGMEIILREMESQP-HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
YG +D +G++ +LRE+ + L W+TY++ A Y+KA + +KA LKK E +
Sbjct: 219 YGCLNDFQGVDRVLREIVNDGGKDNLQWTTYSNLATIYLKAGIFEKAESALKKLEAIMGF 278
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
++ Y+FLIS+YA GN +EV R+W L K++ N Y+ ML+AL KL + E K
Sbjct: 279 RNREAYHFLISIYAGTGNSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKDVEGVAKC 338
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
+EWE +YD RI N I + + + + AE I +D +++ + + +
Sbjct: 339 FREWESGCTNYDMRIANVAIRVFLQHDMYEEAELIFDDALKRTRGPFFKARERFMLFFLK 398
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
+ + + M+AA S E WKP + + + E V E L+ + +
Sbjct: 399 IHQLDLALKHMRAAFSE-SEKHEWKPLQETVNAYFDYFRTEKDVDGAEKLSKILKHINCL 457
Query: 450 NRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL--VC 492
N +Y +K I GK E+ ++ D I+ +E + +L VC
Sbjct: 458 NSSVYSLLLKTYIAAGKLAPEMRQRLEEDNIEISDELEYLLESVC 502
>gi|224138182|ref|XP_002322750.1| predicted protein [Populus trichocarpa]
gi|222867380|gb|EEF04511.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 230/399 (57%), Gaps = 8/399 (2%)
Query: 48 PELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDL 107
P LD W++ G + + +I++LR+ +R+ ALE+S WM K AV+LDL
Sbjct: 64 PVLDKWIQEGETIWEDLIHALIKELRQYRRYHHALEISMWMTDKRYLALTSRAVAVRLDL 123
Query: 108 IGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
I +VHG E+YF+N+ K ++YGALLNCY + +KA + ++M+E+G A L
Sbjct: 124 ISKVHGIEQVENYFNNIPTKLKGLESYGALLNCYAYVKSVEKAEAVMQRMRELGFARKPL 183
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
+ ++ LY KTG EK+ ++ EM+ I D F+Y I ++SY A SD EG+E L+ +
Sbjct: 184 VFTVMLNLYYKTGNTEKLDPLMREMEENGISFDKFAYCIRLSSYAAASDSEGLEKTLKRI 243
Query: 228 ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE-QKDGIGYNFLISLYASLG 286
ES P++VLDW+TYA+ A+ Y K L+DKA ++LK+ E + ++ Y++L++ YA+ G
Sbjct: 244 ESDPNVVLDWATYATVANGYSKVGLLDKALEMLKRCERLITGERRSTPYDYLMTQYATTG 303
Query: 287 NKSEVLRLWDLEKTACKRYI-NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
K +VLR+W+L KRY+ NR I+++ +L+K + E AEK+ +EWE D IP
Sbjct: 304 TKEDVLRVWELH----KRYVGNRKNISVITSLLKFDDLESAEKIFEEWESQKLCDDIIIP 359
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
N ++ Y GL++ AE +L+ + G N+W ++A GY +T + + MK
Sbjct: 360 NFLVDAYSRKGLLEKAEMLLQRTMSNGTKPNANTWYLLAKGYLQHNQTPKAVEAMKEM-- 417
Query: 406 VYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
+ + G +P + L L D G + + E F+ LR
Sbjct: 418 IVLSGPRSRPSTVSWVACLQHLKDSGDMDNAEGFINLLR 456
>gi|297837423|ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332434|gb|EFH62852.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 251/464 (54%), Gaps = 9/464 (1%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
LY + G ++ +L+ ++K V E+ I+ LR R + AL++S+ M +
Sbjct: 25 LYHRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVMEER 84
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
G+ D A+ LDL+ + G + E+YF +L + KT TYG+LLNCY ++ T+KA
Sbjct: 85 GMNKTV-SDQAIHLDLVAKARGITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAE 143
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
KMKE+ I S+++YN +M LY+KTGQ EKVP ++ E+KA+N+ PD+++Y + + +
Sbjct: 144 GLLNKMKELNITPSSMSYNSLMTLYTKTGQTEKVPAMIQELKAENVMPDSYTYNVWMRAL 203
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
A +D+ G+E ++ EM + DW+TY++ A Y+ A L KA L++ E + Q+D
Sbjct: 204 AATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRD 263
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
Y FLI+LY LG +EV R+W + A + N Y+ M++ L+KL + AE + K
Sbjct: 264 FTAYQFLITLYGRLGKLTEVYRIWRSLRLAMPKTSNVAYLNMIQVLVKLNDLPGAETLFK 323
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
EW+ + ++YD RI N +I Y GL++ A+ + E +G +W + Y +G
Sbjct: 324 EWQANCSTYDIRIVNVLIGAYAKEGLIEKAKELKEKAPRRGGKANAKTWEIFMDYYVKSG 383
Query: 392 KTERGFQCMKAALSVYVEGKG----WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVI 447
+CM A+S+ GKG W P + + +++S + V E + L+
Sbjct: 384 DMAHALECMSKAVSI---GKGDGGKWIPSQETVRTLMSYFEQKKDVNGAENLLEILKNGT 440
Query: 448 P-MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ +++ + I+ GK + +K + ++ +E TK++L
Sbjct: 441 DNIGAEIFESLIRTYAAAGKSHPAMRRRLKMENVEVNEVTKKLL 484
>gi|356503236|ref|XP_003520417.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 555
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 247/464 (53%), Gaps = 10/464 (2%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN-R 90
+Y IS NP L+ W G + EL R++++LRK KRF +ALEV DWMN R
Sbjct: 82 VYRRISLNQNPQVGSAEVLNQWENEGRHLTKWELSRVVKELRKYKRFPRALEVYDWMNNR 141
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
+ D A+QLDLI +V G SAE++F +L+D K +TYGALLN YV R +KA
Sbjct: 142 PERFRVSESDAAIQLDLIAKVRGVSSAEAFFLSLEDKLKDKRTYGALLNVYVHSRSKEKA 201
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
S F M+ G + L N +M LY +Y KV + +EM KNI D ++Y I ++S
Sbjct: 202 ESLFDTMRSKGYVIHALPINVMMTLYMNLNEYAKVDMLASEMMEKNIQLDIYTYNIWLSS 261
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
G++ +E ME + +ME P IV +WST+++ A YI+ N +KA L+K E R++ +
Sbjct: 262 CGSQGSVEKMEQVFEQMERDPTIVPNWSTFSTLASMYIRMNQNEKAEKCLRKVEGRIKGR 321
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
D I +++L+SLY S+G K EV R+W+ K+ R N Y ++ +L+KL + E AEK+
Sbjct: 322 DRIPFHYLLSLYGSVGKKDEVYRVWNTYKSIFPRIPNLGYHAIISSLVKLDDIEGAEKLY 381
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+EW +SYD RI N ++ Y A + E + G N+W +++ G+
Sbjct: 382 EEWISVKSSYDPRIGNLLMGWYVKKDDTDKALSFFEQISNDGCIPNSNTWEILSEGHIAD 441
Query: 391 GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMN 450
+ C+K A V K W+P P +++ L ++ ++ E + LR
Sbjct: 442 KRISEALSCLKEAFMVAGGSKSWRPKPSYLSAFLELCQEQNDMESAEVLIGLLRQSKFSK 501
Query: 451 RQMYHAFIKA---NIRNGKG------VDELLDSMKADGIDEDEE 485
++Y + I + I NG+ D D++ ++ +D+D +
Sbjct: 502 IKVYASIIGSPDCTIDNGELQSKIDITDRTDDAVDSENMDDDSQ 545
>gi|395146485|gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linum usitatissimum]
Length = 516
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 157/501 (31%), Positives = 261/501 (52%), Gaps = 12/501 (2%)
Query: 3 PKLKLSTNTQIHNAVFSRFYYTNRI--NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKV 60
P+ +LST T+ + Y R N LY +S LG G ++ L+++V +G +
Sbjct: 15 PRRQLSTATEASASAPDPSYKEQRSSGNPLRLYRRLSALGATGGTVDKVLNDYVMDGMSI 74
Query: 61 RVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY 120
R EL R +++LRK RF+ LE+ +WM ++GI + D AV+LDLI + G AE+Y
Sbjct: 75 RKVELMRCVKELRKYGRFNHGLEIMEWMEKRGINL-GHGDLAVRLDLICKTKGITEAENY 133
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
F+ L K TYG+LLN Y ++ ++KAL F+KM ++ ++L +N++M +Y + G
Sbjct: 134 FNGLVPSAKNPATYGSLLNSYCKKLDSEKALQLFQKMDKLKFFRNSLPFNNLMSMYMRLG 193
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV--LDWS 238
Q EKVP+++++MK N+ P F+Y I I S G D EG++ +L EM + + +W+
Sbjct: 194 QQEKVPELVSQMKQMNLPPCTFTYNIWIQSLGHMRDFEGIKKVLEEMRNDVNFGNNFNWT 253
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
TY++ A Y A ++A LK EER++ D Y+FL++LY + + EV R+W
Sbjct: 254 TYSNLAAVYTSAGEFERAKLALKMMEERIDSHDRNAYHFLLTLYGGIADLEEVHRVWGCL 313
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
K + N Y+ ML+AL +L + E KV +EWE SYD R+ N I Y G+
Sbjct: 314 KAKFNQVTNASYLVMLQALARLKDVEGISKVFEEWESVCTSYDMRVANVAIRVYLEKGMY 373
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG-----KGW 413
AEA+ + +E+ + ++ + E + MKAA + + K W
Sbjct: 374 NEAEAVFDGAMERTPGPYFKTREMLMVSLLKRRQLEPALKQMKAAFTEVGQNEKGHEKEW 433
Query: 414 KPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLD 473
+P +++ + +E V+ E L+ + + +Y +K I GK ++
Sbjct: 434 RPSAEIVNAFFGYFEEEKDVEGAEKMWKILKCINRCDSTVYRLLMKTYIAAGKSAVDMRT 493
Query: 474 SMKADGIDEDEETKEIL--VC 492
+ D ++ DEE + +L VC
Sbjct: 494 RLAEDAVEVDEEIQRLLDVVC 514
>gi|22165052|gb|AAM93669.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432900|gb|AAP54476.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125575303|gb|EAZ16587.1| hypothetical protein OsJ_32059 [Oryza sativa Japonica Group]
Length = 545
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 258/468 (55%), Gaps = 15/468 (3%)
Query: 31 TLYSIISPLGNPGTRIEPELDNW-VKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
+L+ ++ +P + P L+ W + + E+Q II+ L +R+RFSQAL++S WM
Sbjct: 82 SLFRRVAAAADPRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWMT 141
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
+ +P D A +L+LI +VHG A YF ++ D K Q YG+LL CY + +K
Sbjct: 142 ERLHLHLSPGDVAYRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEAKCVEK 201
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A F KM+ MG+A S+ YN +M LY + GQ E+V + M+ I D F+ +
Sbjct: 202 AEELFEKMRGMGMA-SSYAYNVMMRLYLQDGQVERVHSMHRTMEESGIVADVFTTDTLVA 260
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
+Y D+E +E +L + ++ + ++ W +YA+ +++ + ++A +++E+++ +
Sbjct: 261 AYVVAEDIEAIEKVLEKADT-CNDLMTWHSYATIGKVLMQSGMEERALQAFQESEKKIAK 319
Query: 270 KDG-IGYNFLISLYASLGNKSEVLRLWDLEK-----TACKRYINRDYITMLEALMKLGEH 323
K + Y FL+++YA LG SEV R+WD+ K +AC N Y+ + L+K+ +
Sbjct: 320 KSNRVAYGFLLTMYADLGMNSEVDRIWDVYKSKVPASAC----NSMYMCRISVLLKMNDI 375
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
AEK +EWE +D+R+ N ++ YC GL++ AEA+++ V+KG+ N+W +
Sbjct: 376 VGAEKAYEEWESKHVYHDSRLINLLLTAYCKEGLMEKAEALVDQFVKKGRTPFGNTWYKL 435
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
A GYF G+ + K AL+ W PD + L+ ++ +V+ E + L
Sbjct: 436 AGGYFKVGQASKAADLTKKALA--SGSNEWTPDLTNVLMSLNYFAEQKNVEAAEEMASLL 493
Query: 444 RTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
+ +I R +YH +K + GK V +LLD MK DG++ DEET++IL
Sbjct: 494 QRLITPTRDIYHGLLKTYVNAGKPVSDLLDRMKKDGMEADEETEKILA 541
>gi|224084592|ref|XP_002307350.1| predicted protein [Populus trichocarpa]
gi|222856799|gb|EEE94346.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 251/473 (53%), Gaps = 5/473 (1%)
Query: 19 SRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRF 78
+++ Y + + + L + I L +P +R+ L +W+ NGNKV++ +L I + L K KR+
Sbjct: 39 TKYKYIHSSSSSRLETEILRLKSP-SRV---LQDWINNGNKVKLSQLNLISKQLLKSKRY 94
Query: 79 SQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALL 138
QALE+ WM + P HA+ ++LI +V+G A YF + LL
Sbjct: 95 KQALEILQWMENQNNFRITPGHHALMMELIVKVNGLNKAGEYFERIPGSGSKKAASLPLL 154
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
+ YV++R KA S K+ G+ ++ YN++M LY QYEKVP V+ EMK +
Sbjct: 155 HGYVKERDISKAESFMIKLSSSGLLVTPHPYNEMMKLYMALSQYEKVPLVIAEMKRNKLC 214
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
+ SY + + ++G ++ E++ +EM S ++ + WST AS A+ YIKA +DKA
Sbjct: 215 RNVLSYNLWMGAFGEVFEVAKAEMVYKEMVSDENVGVGWSTLASLANVYIKAGFVDKALL 274
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALM 318
VLK AE +L +GY FLI+LY+SL NK VLRLW+ K R DY+ ++ L+
Sbjct: 275 VLKDAEMKLSTNGRLGYFFLITLYSSLKNKEGVLRLWEASKAVGGRIPCADYMCVISCLV 334
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
K+G+ AE+V EWE + YD R+ N ++ Y NGL+ AE+ VE+G
Sbjct: 335 KVGDLVAAEQVFAEWETNCFKYDIRVSNVLLGAYVRNGLMGKAESFHLHTVERGGCPNYK 394
Query: 379 SWAVVAAGYFDAGKTERGFQCMKAALSVY-VEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
+W ++ G+ + K ++ MK SV VE W+P ++ +I G+ +D
Sbjct: 395 TWEILMEGWVKSQKMDKAIDAMKKGFSVLKVERCDWRPSHSILMAIAEHFEKHGNFEDAN 454
Query: 438 AFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
++ A+ + +Y F++ + + ++L M+ D I+ D+ET ++
Sbjct: 455 HYIKAVHGLGVATLPLYKLFLRMYLNAQRPAWDILKMMEKDRIELDDETSALV 507
>gi|115436132|ref|NP_001042824.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|14495231|dbj|BAB60950.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532355|dbj|BAF04738.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|125525550|gb|EAY73664.1| hypothetical protein OsI_01547 [Oryza sativa Indica Group]
gi|125570062|gb|EAZ11577.1| hypothetical protein OsJ_01442 [Oryza sativa Japonica Group]
gi|215713519|dbj|BAG94656.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 504
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/460 (33%), Positives = 248/460 (53%), Gaps = 7/460 (1%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
LY+ +S G +E EL W++ + ++ +R RK K+ AL++ DWM
Sbjct: 42 ALYARLSAHLPSGGMVE-ELGRWLRERRPLSEEQVLFCVRRFRKFKQNKHALQLMDWMEA 100
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
+G+ + HA++LDL+ +++G +AE YF +L D ++ QTY LLNCY R +K
Sbjct: 101 RGVNLELK-HHALRLDLVSKLNGIHAAEEYFGSLPDIFRSKQTYSTLLNCYAEHRMAEKG 159
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
L + MK M I L YN++MCLY KT Q EK+P + +M+ I P+ FSY + S
Sbjct: 160 LELYENMKAMNIVSDILVYNNLMCLYLKTDQPEKIPTTVVKMQESGIQPNKFSYFVLTES 219
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
Y +D+E E +L+E++ + WS YA+ A+ Y K DKA LKKAEE L++
Sbjct: 220 YIMMNDIESAEKVLKELQEVNSV--PWSLYATLANGYNKLQQFDKAEFTLKKAEEVLDKH 277
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
D ++ L+S YA+ GN SEV R+W+ K+A K+ NR Y+ ML+AL KL + + +++
Sbjct: 278 DVFSWHCLLSHYANSGNLSEVKRIWESLKSAFKKCTNRSYLVMLKALKKLDDFDTLQQIF 337
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+EWE S YD +IPN +I Y + G+V AEA+ + + + + ++ + A Y +
Sbjct: 338 QEWESSHEHYDMKIPNIIIQAYLDKGMVDKAEAMRQTTMAQDHSNY-RTFCIFAEFYLEK 396
Query: 391 GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMN 450
K Q K A + V+G+ W P+ K++ L D V +E F L+ + ++
Sbjct: 397 SKMNEALQVWKDAKKM-VKGQDWVPE-KLVNRYLKHFEDSKDVDGMETFCECLKNLGRLD 454
Query: 451 RQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ Y A I+ I G+ + M+ D +D E E L
Sbjct: 455 AEAYEALIRTYISVGRTNPSIPQRMEVDRVDIRPEMFESL 494
>gi|297737393|emb|CBI26594.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/441 (33%), Positives = 245/441 (55%), Gaps = 5/441 (1%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+ W + G+ VR EL RI+R+LRK KR+ ALE+ +WM ++ D+AV LDLI
Sbjct: 76 IQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIA 135
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
++ G SAE +F +L D K T ALL+ YV+ + ++KA + KM E G L Y
Sbjct: 136 KIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPY 195
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ LY GQ EKVP ++ E+K KN PD +Y + + +++D+E E +L E++
Sbjct: 196 NHMISLYISDGQLEKVPGMIQELK-KNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIK- 253
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ I DW TY+S + YIK L+DKA+ L + E+R +K I Y+ LISL+ ++ +K
Sbjct: 254 KAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKD 313
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
V R+W K+ + + +Y M+ +L+KLGE EEAE + EW + D+R+PN ++
Sbjct: 314 GVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILL 373
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
Y N ++ AE +VE+G + +W ++ GY + E+ + A+
Sbjct: 374 AAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSV-- 431
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD 469
K W PD K++ + L ++G+++ E + LR ++ ++Y+ ++A + GK
Sbjct: 432 -KKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLLRAYAKAGKMPL 490
Query: 470 ELLDSMKADGIDEDEETKEIL 490
+ + MK D ++ DEET ++
Sbjct: 491 IVAEWMKKDKVEMDEETHRLI 511
>gi|359490027|ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/441 (33%), Positives = 245/441 (55%), Gaps = 5/441 (1%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+ W + G+ VR EL RI+R+LRK KR+ ALE+ +WM ++ D+AV LDLI
Sbjct: 189 IQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIA 248
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
++ G SAE +F +L D K T ALL+ YV+ + ++KA + KM E G L Y
Sbjct: 249 KIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPY 308
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ LY GQ EKVP ++ E+K KN PD +Y + + +++D+E E +L E++
Sbjct: 309 NHMISLYISDGQLEKVPGMIQELK-KNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIK- 366
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ I DW TY+S + YIK L+DKA+ L + E+R +K I Y+ LISL+ ++ +K
Sbjct: 367 KAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKD 426
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
V R+W K+ + + +Y M+ +L+KLGE EEAE + EW + D+R+PN ++
Sbjct: 427 GVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILL 486
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
Y N ++ AE +VE+G + +W ++ GY + E+ + A+
Sbjct: 487 AAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSV-- 544
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD 469
K W PD K++ + L ++G+++ E + LR ++ ++Y+ ++A + GK
Sbjct: 545 -KKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLLRAYAKAGKMPL 603
Query: 470 ELLDSMKADGIDEDEETKEIL 490
+ + MK D ++ DEET ++
Sbjct: 604 IVAEWMKKDKVEMDEETHRLI 624
>gi|224121672|ref|XP_002330624.1| predicted protein [Populus trichocarpa]
gi|222872228|gb|EEF09359.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 235/403 (58%), Gaps = 4/403 (0%)
Query: 36 ISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICV 95
IS + +P + P ++ WV+ G V +L+ IR LRK RFS AL++S WM+ +
Sbjct: 39 ISMVEDPMVPVIPVIEKWVQEGQVVTNSDLKHFIRKLRKIHRFSHALQISQWMSDQRGHN 98
Query: 96 FAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFR 155
+P D AV+LDLI +VHG A +YF+++ + + + YGALLNCY + ++A + R
Sbjct: 99 LSPGDVAVRLDLISKVHGLEQAVTYFNSVPESLRGLEVYGALLNCYAHYKHLEEAEATMR 158
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARS 215
KM+EMG + L+YN ++ LY + G+YEK+ ++ EM+ I N +Y+I +N+Y A S
Sbjct: 159 KMREMGFVRNVLSYNVMLNLYYQMGKYEKIQVLMQEMEKWGICFSNITYKILLNAYVATS 218
Query: 216 DLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG-IG 274
++E ++ IL +ME+ P + +DW Y AA+ Y+KA LIDK +L ++E+ + K
Sbjct: 219 NIEEIKKILMKMEADPLVSIDWYAYVVAANGYLKAGLIDKTLTMLWRSEQLISGKSARFA 278
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
L+SLY ++GNK +V R+W+L KT R +N Y+ M+ +L+KL + + AE++ +EW
Sbjct: 279 CETLLSLYTAVGNKEQVYRVWNLYKTK-GRSLNSSYLCMINSLLKLDDVDGAERIWEEWV 337
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
+D RIPN ++ Y GL + AEA + +V G ++ +A GY G+
Sbjct: 338 SIVKFFDIRIPNVMVSAYSKKGLWEKAEAFVGKIVASGIKIEASTLDRLATGYHVRGQML 397
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
+ + +K A+S + GWKP+ + + L L V+ +E
Sbjct: 398 KASETIKKAIS--ISQPGWKPNVYTLAACLEYLKGREDVKKIE 438
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/441 (33%), Positives = 245/441 (55%), Gaps = 5/441 (1%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+ W + G+ VR EL RI+R+LRK KR+ ALE+ +WM ++ D+AV LDLI
Sbjct: 76 IQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIA 135
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
++ G SAE +F +L D K T ALL+ YV+ + ++KA + KM E G L Y
Sbjct: 136 KIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPY 195
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ LY GQ EKVP ++ E+K KN PD +Y + + +++D+E E +L E++
Sbjct: 196 NHMISLYISDGQLEKVPGMIQELK-KNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIK- 253
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ I DW TY+S + YIK L+DKA+ L + E+R +K I Y+ LISL+ ++ +K
Sbjct: 254 KAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKD 313
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
V R+W K+ + + +Y M+ +L+KLGE EEAE + EW + D+R+PN ++
Sbjct: 314 GVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILL 373
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
Y N ++ AE +VE+G + +W ++ GY + E+ + A+
Sbjct: 374 AAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSV-- 431
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD 469
K W PD K++ + L ++G+++ E + LR ++ ++Y+ ++A + GK
Sbjct: 432 -KKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLLRAYAKAGKMPL 490
Query: 470 ELLDSMKADGIDEDEETKEIL 490
+ + MK D ++ DEET ++
Sbjct: 491 IVAEWMKKDKVEMDEETHRLI 511
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 12/198 (6%)
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
+D + +N LIS YA G+ +E L L+D + + + +L A L EE EKV
Sbjct: 832 RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEGEKV 891
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
++ I A+I Y G ++ + I + E+ T W V+ +GY
Sbjct: 892 HNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVIT----WNVMISGYGM 947
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR--TVI 447
G + + +E KP+ ++LS G V++ + ++ +V
Sbjct: 948 HGDARSAIEXFQQ-----MEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVA 1002
Query: 448 PMNRQMYHAFIKANIRNG 465
P N + Y + R+G
Sbjct: 1003 P-NLKHYACMVDLLGRSG 1019
>gi|449432307|ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
gi|449525818|ref|XP_004169913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
Length = 537
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/450 (33%), Positives = 233/450 (51%), Gaps = 4/450 (0%)
Query: 11 TQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIR 70
+Q+H+ F +Y IS + NP L+ W G + EL R+++
Sbjct: 51 SQVHSYGTVDFERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVK 110
Query: 71 DLRKRKRFSQALEVSDWM-NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEK 129
+LRK KRF +ALE+ DWM NR+ D A+QLDLI +V G SAE YF L + K
Sbjct: 111 ELRKYKRFERALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLK 170
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ YGALLN Y + RQ +KA + KM+ G L +N +M LY +YEKV ++
Sbjct: 171 DRRIYGALLNAYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLV 230
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+EM +I D +SY I ++S G + E ME + +M+ I +W+T+++ A YIK
Sbjct: 231 SEMTENSIQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIK 290
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
L++KA + L++ E R+ +D I Y++LISLY S+GNK E+ R+W++ K N
Sbjct: 291 MGLMEKAEECLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLG 350
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ AL+++G+ E AEK+ +EW ++YD RI N I Y G AE+ + +V
Sbjct: 351 YHAIISALIRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMV 410
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG-KGWKPDPKVITSILSKLG 428
E G ++W ++ + G+ K A S EG K W+P P + +
Sbjct: 411 EVGGKPNSSTWEILVDRHTKEGRVSDALASWKEAFS--AEGSKSWRPKPYNVLAYFDLCE 468
Query: 429 DEGSVQDVEAFVAALRTVIPMNRQMYHAFI 458
EG + E V LR + + Y + I
Sbjct: 469 KEGDIASKEVLVGLLRQPKYLQDKTYASLI 498
>gi|224119780|ref|XP_002331159.1| predicted protein [Populus trichocarpa]
gi|118487894|gb|ABK95769.1| unknown [Populus trichocarpa]
gi|222873242|gb|EEF10373.1| predicted protein [Populus trichocarpa]
Length = 490
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 249/462 (53%), Gaps = 3/462 (0%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
LY + G+ + +L+ ++K+ +V E+ I+ LR R + A+++S+ M+
Sbjct: 24 ALYVRLFKEGSSEVSVRQQLNQFLKSSKRVFKWEVGDTIKKLRSRNLYYPAVKLSETMSS 83
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
+G+ D A+ LDL+ + G +AE+YF +L + K +TYGALLNCY ++ T++A
Sbjct: 84 RGMNKTVS-DQAIHLDLVAKTRGIPAAENYFIDLPETSKNLRTYGALLNCYCKELMTEEA 142
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+ KMKE+ + LS+++YN +M LY+K GQ E++P ++ EMKA N+ PD+++Y + + +
Sbjct: 143 EALIEKMKELNLGLSSMSYNSLMTLYTKVGQPERIPAIIQEMKADNVMPDSYTYNVWMRA 202
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
A +D+ G+E ++ EM+ + +W+TY++ A Y+ A DKA LK+ E+ K
Sbjct: 203 LAAVNDISGVERVIEEMKRDGRVAANWTTYSNLASIYVDAGYFDKAEKALKELEKINANK 262
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
D + FLI+LY G EV R+W + A + N Y+ M++ L+ L + AEK
Sbjct: 263 DLFAFQFLITLYGRTGKLIEVYRIWRSLRLAFPKTANISYLNMIQVLVNLKDVPGAEKCF 322
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+EWE ++YD R+ N VI Y GLV AE + E +G +W + Y
Sbjct: 323 REWESGCSTYDIRVANVVISAYAKEGLVDKAEELKERARRRGAKPNSKTWEIFCDYYLKN 382
Query: 391 GKTERGFQCMKAALSV-YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVI-P 448
G + G C+ A+S G+ W P P ++ S+++ + V E + L+ +
Sbjct: 383 GDVKLGVDCIANAVSAGRGNGQKWVPSPVIVGSLMAHFEQQKDVDGAEDLIEILKKAVDD 442
Query: 449 MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ +++ + I+ G+ + +K + ++ ++ +++L
Sbjct: 443 VAVEVFESLIRTYAAAGRKSQLMRRRLKMENVEVSDDCQKLL 484
>gi|225453344|ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
[Vitis vinifera]
Length = 527
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 239/450 (53%), Gaps = 7/450 (1%)
Query: 11 TQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIR 70
+QIH+ + + +Y IS + NP L+ W G ++ EL R+++
Sbjct: 39 SQIHSYGTVDYERRPLVKWNAVYRRISLMENPEMGSASVLNQWENEGKRLTKWELCRVVK 98
Query: 71 DLRKRKRFSQALEVSDWMNRKGICV-FAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEK 129
+LRK KRF ALEV +WMN +G + D A+QLDLI +V G SAE YFS L D K
Sbjct: 99 ELRKFKRFKMALEVYEWMNNRGERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLK 158
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ YGALLN YV+ + DKA K++ G A + L +N +M LY + +KV ++
Sbjct: 159 DKRIYGALLNAYVQAKMRDKAEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMI 218
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+EM KNI D +SY I ++S E ME + +M+ + I +W+T+++ A YIK
Sbjct: 219 SEMMNKNIQLDIYSYNIWLSSC---ESTERMEQVFEQMKLERTINPNWTTFSTMATMYIK 275
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+KA + LKK E R+ +D + Y++LISLY S GNK+EV R W++ K+ N
Sbjct: 276 LGQFEKAEECLKKVESRITNRDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLG 335
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ +L+++G+ E AEK+ +EW +SYD RI N ++ Y G ++ AE L+ ++
Sbjct: 336 YHALISSLVRVGDLEGAEKIYEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMI 395
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK-GWKPDPKVITSILSKLG 428
E G +W ++A G K C K A V EG GWKP P +++ L
Sbjct: 396 EAGGKPNSTTWEILAEGNTGVKKISDALSCFKRA--VLAEGSNGWKPKPVNVSAFLDLCE 453
Query: 429 DEGSVQDVEAFVAALRTVIPMNRQMYHAFI 458
+E EA + LR + + + Y +
Sbjct: 454 EEADTATKEALMGLLRQMGCLEDEPYASLF 483
>gi|225459164|ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Vitis vinifera]
Length = 475
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/441 (30%), Positives = 245/441 (55%), Gaps = 1/441 (0%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L NW+ G+KV +L+ + R L K KR ALE+ WM + + DHA++L+LI
Sbjct: 31 LQNWIDQGHKVTASDLRNVSRQLLKSKRHKHALEILAWMEAQNRFQMSAADHAIRLELII 90
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
++ AE YF +L + LL+ YV++R +KA + K+ ++G+ +S +
Sbjct: 91 KIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIEKAEALMLKLNDLGLTVSPHPF 150
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N++M LY T Q+E+VP V+ +MK I + SY + +++ S L E++ ++M
Sbjct: 151 NEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWMSACSEVSGLASAEMVYKDMVD 210
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
++ + WST ++ A+ Y+K+ LI KA+ LK AE++L + +GY FLI++YASL NK
Sbjct: 211 DKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLSAHNRLGYFFLITMYASLSNKE 270
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
EVLRLW+ K R + +Y+ +L L+KLG+ EAE++ +EWE YD R+ N ++
Sbjct: 271 EVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFREWESKCWKYDIRVSNVLL 330
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
Y G + AE++ +E+G +W ++ G+ + ++ MK S+ ++
Sbjct: 331 GAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGWMKSQNMDKAINAMKKGFSM-LK 389
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD 469
W+P+ ++T+I L + G+V D+ +V + + +Y + ++ ++ + V
Sbjct: 390 HCDWRPNHGLVTAIARYLEEHGNVNDLNQYVKVIHQLGVAKLPLYKSLLRMHLLFQRPVF 449
Query: 470 ELLDSMKADGIDEDEETKEIL 490
++L M+ D I+ D+ET ++
Sbjct: 450 DILKMMEKDEIEMDDETSALV 470
>gi|18411800|ref|NP_567220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163252|sp|Q93WC5.1|PP300_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01990, mitochondrial; Flags: Precursor
gi|14517494|gb|AAK62637.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|16323354|gb|AAL15390.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|332656708|gb|AEE82108.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 502
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/461 (33%), Positives = 247/461 (53%), Gaps = 4/461 (0%)
Query: 31 TLYSIISPLGN-PGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
++Y +S LG G ++E L+ +V G V+ +L R +DLRK ++ +ALE+ +WM
Sbjct: 40 SIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWME 99
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
RK I F DHA++L+LI + G +AE+YF++L D K TYG+LLNCY +++ K
Sbjct: 100 RKEI-AFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVK 158
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A +HF M ++ ++L +N++M +Y GQ EKVP ++ MK K+I P + +Y + I
Sbjct: 159 AKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQ 218
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
S G+ DL+G+E +L EM+++ + W+T+A+ A YIK L KA + LK E +
Sbjct: 219 SCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNP 278
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
Y+FLI+LY + N SEV R+WDL K N Y+TML AL KL + + +KV
Sbjct: 279 DVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKV 338
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
EWE + +YD R+ N I Y + + AEA+ ++K K + ++
Sbjct: 339 FAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLK 398
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
+ + + +AA V + K W ++I+S + V E F L P+
Sbjct: 399 NDQADLALKHFEAA--VLDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPL 456
Query: 450 NRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ + Y +K + GK ++ ++ GI DEE + +L
Sbjct: 457 SSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLL 497
>gi|4558568|gb|AAD22661.1|AC007138_25 hypothetical protein [Arabidopsis thaliana]
gi|7268583|emb|CAB80692.1| hypothetical protein [Arabidopsis thaliana]
Length = 501
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/461 (33%), Positives = 247/461 (53%), Gaps = 4/461 (0%)
Query: 31 TLYSIISPLGN-PGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
++Y +S LG G ++E L+ +V G V+ +L R +DLRK ++ +ALE+ +WM
Sbjct: 39 SIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWME 98
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
RK I F DHA++L+LI + G +AE+YF++L D K TYG+LLNCY +++ K
Sbjct: 99 RKEI-AFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVK 157
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A +HF M ++ ++L +N++M +Y GQ EKVP ++ MK K+I P + +Y + I
Sbjct: 158 AKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQ 217
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
S G+ DL+G+E +L EM+++ + W+T+A+ A YIK L KA + LK E +
Sbjct: 218 SCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNP 277
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
Y+FLI+LY + N SEV R+WDL K N Y+TML AL KL + + +KV
Sbjct: 278 DVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKV 337
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
EWE + +YD R+ N I Y + + AEA+ ++K K + ++
Sbjct: 338 FAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLK 397
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
+ + + +AA V + K W ++I+S + V E F L P+
Sbjct: 398 NDQADLALKHFEAA--VLDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPL 455
Query: 450 NRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ + Y +K + GK ++ ++ GI DEE + +L
Sbjct: 456 SSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLL 496
>gi|449434959|ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Cucumis sativus]
gi|449478594|ref|XP_004155363.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Cucumis sativus]
Length = 489
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 252/452 (55%), Gaps = 4/452 (0%)
Query: 40 GNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPC 99
G + +L+ ++K+ +V E+ +R LR RK + AL++S+ M ++G+
Sbjct: 35 GGSEKSVRLQLNKFIKSHKRVFKWEVGDTLRKLRDRKLYYPALKLSEIMAKRGMNKTV-S 93
Query: 100 DHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
D A+ LDL+ + G +AE+YF +L + K + +Y +LLNCY ++ T+KA + F K+KE
Sbjct: 94 DQAIHLDLVAKARGIDAAENYFVSLPESSKNHLSYSSLLNCYCKELLTEKAEALFEKIKE 153
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
+ + ++ + YN +M LYSK G+ +KV ++ EMKA N+ D ++Y + + + A +D+ G
Sbjct: 154 LNLPVTPVPYNSLMTLYSKIGRPDKVCTIIQEMKAANVTFDPYTYIVWMRALAALNDISG 213
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+E ++ EM+ + + DW+TY++ A Y+ AN+ +KA+ LK E+ ++D IG+ FLI
Sbjct: 214 VERVIDEMK-RDGVKGDWTTYSNLASIYVNANMFEKAAKALKDLEKINTRRDLIGFQFLI 272
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
+LY +G+ +EV R+W + A R N Y+ M++ L KL + AEK KEWE +
Sbjct: 273 TLYGQIGDLTEVYRVWRSLRLAFPRTANISYLNMIQTLTKLKDLPGAEKCFKEWESGSPT 332
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC 399
YD RIPNA+I Y GL++ A A+ E + +G +W Y G + C
Sbjct: 333 YDIRIPNALIGAYTKGGLLEKAMALKERALRRGARPNAKTWEFFLNYYLKNGDFKLAGDC 392
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFI 458
+ A+ GK W P P++I S +S E V E+F+ + +TV + +++ + I
Sbjct: 393 VAKAIGKGDRGK-WIPSPEIIKSFMSHFEQEKDVDGAESFLEIVKKTVDSLESEVFESLI 451
Query: 459 KANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ G+ + +K + ++ E K++L
Sbjct: 452 RTYSAAGRTSSSMSRRLKMENVEVSEACKKLL 483
>gi|108862755|gb|ABA99305.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215704853|dbj|BAG94881.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712260|dbj|BAG94387.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 514
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/447 (30%), Positives = 246/447 (55%), Gaps = 11/447 (2%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L W + G V+ +L R++R+LRK +RF ALE+ +WM + P DHAV LDL+
Sbjct: 63 LRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMRTQPEMRLLPGDHAVHLDLVA 122
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+V G SAE +F ++ + K T ALL+ YV+ + DKA + +M + G L +
Sbjct: 123 KVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAGYLTCALPF 182
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N +M LY +G+ EKVP+++ E++ I PD +Y I + ++ ++ E + M+
Sbjct: 183 NHMMSLYMSSGELEKVPEMIKELRRYTI-PDLVTYNIWLTYCSKKNSVKAAEKVYDLMKD 241
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ +V DW T++ YI A L K D L + E+R +K+ Y+ L++LYASL ++
Sbjct: 242 E-RVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTLYASLSDRG 300
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+ R+W + +++ + +Y ML +L + G+ EAE EWE + + D+RIPN ++
Sbjct: 301 NLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESASGTRDSRIPNTIL 360
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
Y NG+++ AE L+ +V+KG + ++W + GY G+ ++ +C+K ALS
Sbjct: 361 AFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKVLECLKKALSCL-- 418
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKG-- 467
+ W P+P++ T+I S++ ++G ++ E + R + ++Y++ ++ +
Sbjct: 419 -EKWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYVTTEIYNSVLRTYAKAELMPL 477
Query: 468 -VDELLDSMKADGIDEDEETKEILVCT 493
VDE +D D + D+ET+ +L T
Sbjct: 478 IVDERMDQ---DKVSMDDETRSLLRLT 501
>gi|297734632|emb|CBI16683.3| unnamed protein product [Vitis vinifera]
Length = 423
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/408 (36%), Positives = 223/408 (54%), Gaps = 7/408 (1%)
Query: 41 NPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICV-FAPC 99
NP L+ W G ++ EL R++++LRK KRF ALEV +WMN +G +
Sbjct: 3 NPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNNRGERFRLSSS 62
Query: 100 DHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
D A+QLDLI +V G SAE YFS L D K + YGALLN YV+ + DKA K++
Sbjct: 63 DAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKLRN 122
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
G A + L +N +M LY + +KV +++EM KNI D +SY I ++S E
Sbjct: 123 KGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSC---ESTER 179
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
ME + +M+ + I +W+T+++ A YIK +KA + LKK E R+ +D + Y++LI
Sbjct: 180 MEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITNRDRMPYHYLI 239
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
SLY S GNK+EV R W++ K+ N Y ++ +L+++G+ E AEK+ +EW +S
Sbjct: 240 SLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEWLSVKSS 299
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC 399
YD RI N ++ Y G ++ AE L+ ++E G +W ++A G K C
Sbjct: 300 YDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTGVKKISDALSC 359
Query: 400 MKAALSVYVEGK-GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV 446
K A V EG GWKP P +++ L +E EA + LR +
Sbjct: 360 FKRA--VLAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQM 405
>gi|326493098|dbj|BAJ85010.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510377|dbj|BAJ87405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 231/430 (53%), Gaps = 3/430 (0%)
Query: 30 TTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM- 88
++LY ++ +G+ G + L +W + ++ EL RI R+LRK +RF+ ALEV DWM
Sbjct: 68 SSLYRRVA-VGHGGRPVGRTLADWDEGERRLDKWELCRIARELRKFRRFNLALEVYDWMT 126
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
+R+ + D A+QLDLI +V G AE YF L D K +TYG+LLN Y + R +
Sbjct: 127 DRRDRFSLSSSDMAIQLDLIAKVRGVPDAEEYFEKLPDPLKDKRTYGSLLNVYAQARMKE 186
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
K F +M++ G A TL +N +M Y + EKV V EMK +NI D +Y I I
Sbjct: 187 KTEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVCTYNIWI 246
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
A D + ME +L +M + +V +W+TY + A +IK +KA + LK+AE+R
Sbjct: 247 KCCAAMKDADAMERVLNQMTADESVVANWTTYTTLASMHIKLENFEKAEECLKEAEKRAT 306
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
+D ++FLI+LY+ L K EV R+W+ K K N Y +L AL++LG+ E AE
Sbjct: 307 GRDKKCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNLGYQEVLSALVRLGDIEGAEL 366
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ +EW +S+D + N ++ Y G V A+ L VEKG PN+W ++A Y
Sbjct: 367 LYEEWASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRFVEKGGNPKPNTWEILATAYL 426
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
+ C++ A +V K W+P P + ++L+ ++ + V+ ++ LR+
Sbjct: 427 KDNQLSEALSCLEKATAVKSASK-WRPRPTNVETLLAYFKEKNDTESVDRLMSVLRSRGC 485
Query: 449 MNRQMYHAFI 458
+ Y + I
Sbjct: 486 AENEEYKSLI 495
>gi|224064562|ref|XP_002301516.1| predicted protein [Populus trichocarpa]
gi|222843242|gb|EEE80789.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 248/472 (52%), Gaps = 15/472 (3%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
+Y +S LG G + L+ + G K L I+ LRK RF A+EV +WM ++
Sbjct: 1 MYRRLSELGASGGSVSKTLNELILEGGKTSKINLTTCIKKLRKYGRFDHAIEVMEWMQKR 60
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
+ F+ DHAV LDL + G +AE+YF NL + + TY LLNCY ++ ++KAL
Sbjct: 61 KMN-FSHVDHAVYLDLTAKTKGIAAAENYFDNLPPSVQNHVTYSTLLNCYCKELMSEKAL 119
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
+ F KM +M + +++ +N++M L+ + GQ EKV ++ EMK + + P F+Y I + SY
Sbjct: 120 TLFEKMDKMKLLSTSMPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNIWMQSY 179
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE--- 268
G +D EG++ +L EM++ W+TY++ A Y+KA L DKA L+K EE++E
Sbjct: 180 GCLNDFEGVQRVLDEMKTDGKENFSWTTYSNLATIYVKAGLFDKAESALRKLEEQIECGR 239
Query: 269 ----QK------DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALM 318
QK D Y+FLISLYA N SEV R+W+ K++ + N Y+ +L+AL
Sbjct: 240 DCDFQKKRRHDADREAYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQALA 299
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
KL + E K KEWE S +SYD + N I + + + A +I ++ +++ K
Sbjct: 300 KLKDVEGILKCFKEWESSCHSYDMGLANVAIRACLEHDMYEEAASIFDEALKRTKGLFFK 359
Query: 379 SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA 438
+ + + + + + MKAA S E + W+PD K +++ L+ D V E
Sbjct: 360 AREMFMVFFLKNHQPDLALKHMKAAFSEAKEIE-WQPDQKTVSAFLNYFEDGKDVDGAER 418
Query: 439 FVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ + +N Y +K G+ E+ ++ D I+ + E + +L
Sbjct: 419 LCKIWKQINRLNSNAYILLLKTYTAAGRLAPEMRQRLEEDNIEINPELENLL 470
>gi|224085447|ref|XP_002307578.1| predicted protein [Populus trichocarpa]
gi|222857027|gb|EEE94574.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 245/441 (55%), Gaps = 5/441 (1%)
Query: 53 WVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVH 112
W + G+ VR EL RI+R+LRK KR+ ALEV +WM ++ P D+AV LDLI ++
Sbjct: 63 WKEEGHNVRKYELNRIVRELRKLKRYKHALEVCEWMTKQSDIKLVPGDYAVHLDLIAKIR 122
Query: 113 GFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI 172
G SAE +F ++ D + YQ ALL+ YV+ + KA + KM E G + L YN +
Sbjct: 123 GLNSAEKFFEDIPDKMRDYQACSALLHVYVQNKSISKAEALMEKMSECGFLKNALPYNHM 182
Query: 173 MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH 232
+ +Y GQ EKV +++ E+K K PD +Y + + + +++D+E E + E++ +
Sbjct: 183 LSVYVANGQLEKVAEIIQELKKKT-SPDVVTYNMWLTACASQNDVETAEKVFMELK-KSK 240
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
+ DW TY++ + YIK ++KA+ LK+ E+R +K+ + Y+ L+SL+A++ +K +
Sbjct: 241 LDPDWVTYSTLTNLYIKKECLEKAAYTLKEVEKRASKKNRVTYSSLLSLHANMKDKDGLH 300
Query: 293 RLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
R W+ K+ + + +Y M+ +L+KLGE AE + EWE + D+R+ N V+ Y
Sbjct: 301 RTWNKMKSVFNKMNDAEYNCMISSLVKLGEFGGAENLYNEWESVSATRDSRVSNIVLASY 360
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
N +++AE + +V+KG +W ++ G+ + E+ + K AL +
Sbjct: 361 INRNQMEDAENFCQRMVQKGITPCYTTWELLTCGHLKTEQMEKVLENFKKALCSV---RK 417
Query: 413 WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELL 472
W PD ++I I L + G ++ E + LR ++ +Y++ ++ + GK +
Sbjct: 418 WTPDKRLIGDIFKNLEERGDIEGAEKLLVILRDAGHVSTMIYNSLLRTYAKAGKMPVIIE 477
Query: 473 DSMKADGIDEDEETKEILVCT 493
+ M+ D ++ D+ET +++ T
Sbjct: 478 ERMQKDNVELDDETHKLIQTT 498
>gi|255571041|ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534146|gb|EEF35862.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 230/405 (56%), Gaps = 3/405 (0%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
I ++Y IS + P L+ K+G K+ EL R++++LRK KR QALEV D
Sbjct: 66 IKWNSVYRRISLMEKPELGAATVLNEMEKDGKKLTKWELCRVVKELRKYKRHKQALEVYD 125
Query: 87 WMN-RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQR 145
WMN R+ + D A+QLDL+ +V G SAE YF L D+ K + YGALLN YV+ R
Sbjct: 126 WMNNREERFRLSASDAAIQLDLVAKVRGVSSAEDYFMRLSDNVKDRRVYGALLNSYVKAR 185
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
+KA S KM++ L +N +M LY +Y+KV +++EM AKNI D +SY
Sbjct: 186 MREKAESLIEKMRKKDYTTHALPFNVMMTLYMNLKEYDKVDMMISEMMAKNIRLDIYSYN 245
Query: 206 ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
I ++S G++ +E ME + +M+ I +W+T+++ A YIK ++KA D L++ E
Sbjct: 246 IWLSSRGSQGSIERMEEVYEQMKLDSTINPNWTTFSTMATMYIKMGQLEKAEDCLRRVES 305
Query: 266 RLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEE 325
R+ +D I Y++L+SLY ++GNK E+ R+W++ K+ N Y ++ +L+++ + E
Sbjct: 306 RITGRDRIPYHYLLSLYGNVGNKEEIYRVWNIYKSIFATIPNLGYHAIISSLVRMDDIEG 365
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
AEK+ +EW +SYD RI N ++ Y G + AE+ + ++E G ++W ++A
Sbjct: 366 AEKIYEEWLPVKSSYDPRIGNLLMGWYVRGGNLDKAESFFDHMMEVGGKPNSSTWEILAD 425
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G+ + C K A + K WKP P +I+S KL +E
Sbjct: 426 GHTREKRISEALSCFKEAF-LAQGSKSWKPKPVIISSFF-KLCEE 468
>gi|326498623|dbj|BAK02297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/430 (33%), Positives = 230/430 (53%), Gaps = 3/430 (0%)
Query: 30 TTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM- 88
++LY ++ +G+ G + L +W + ++ EL RI R+LRK +RF+ ALEV DWM
Sbjct: 68 SSLYRRVA-VGHGGRPVGRTLADWDEGERRLDKWELCRIARELRKFRRFNLALEVYDWMT 126
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
+R+ + D A+QLDLI +V G E YF L D K +TYG+LLN Y + R +
Sbjct: 127 DRRDRFSLSSSDMAIQLDLIAKVRGVPDTEEYFEKLPDPLKDKRTYGSLLNVYAQARMKE 186
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
K F +M++ G A TL +N +M Y + EKV V EMK +NI D +Y I I
Sbjct: 187 KTEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVCTYNIWI 246
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
A D + ME +L +M + +V +W+TY + A +IK +KA + LK+AE+R
Sbjct: 247 KCCAAMKDADAMERVLNQMTADESVVANWTTYTTLASMHIKLENFEKAEECLKEAEKRAT 306
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
+D ++FLI+LY+ L K EV R+W+ K K N Y +L AL++LG+ E AE
Sbjct: 307 GRDKKCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNLGYQEVLSALVRLGDIEGAEL 366
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ +EW +S+D + N ++ Y G V A+ L VEKG PN+W ++A Y
Sbjct: 367 LYEEWASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRFVEKGGNPKPNTWEILATAYL 426
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
+ C++ A +V K W+P P + ++L+ ++ + V+ ++ LR+
Sbjct: 427 KDNQLSEALSCLEKATAVKSASK-WRPRPTNVETLLAYFKEKNDTESVDRLMSVLRSRGC 485
Query: 449 MNRQMYHAFI 458
+ Y + I
Sbjct: 486 AENEEYKSLI 495
>gi|296083491|emb|CBI23460.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 222/378 (58%), Gaps = 1/378 (0%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
LY + G+ + +L++++K+ +V E+ ++ LR RKRF AL++S+ M ++
Sbjct: 24 LYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSETMAKR 83
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
G+ + D A+ LDLI + G +AE+YF +L + K + TYGALLNCY ++ T+KA
Sbjct: 84 GMNM-TISDQAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAE 142
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
+ +MKE+ + LS++ YN +M LY+K GQ EK+P ++ E+K+ +I PD+++Y I + +
Sbjct: 143 ALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRAL 202
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
A +D+ G+E ++ EM+ + DW+TY++ A Y+ A + +KA LK+ E+R +D
Sbjct: 203 AAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEKRNACRD 262
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
+ FLI+LY +GN EV R+W + A + N Y+ M++ L+ L + AEK +
Sbjct: 263 LTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCFR 322
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
EWE + YD R+ NA+I Y +GL++ AE + E +G +W + A +
Sbjct: 323 EWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKPNAKTWEIFLAYHLKNR 382
Query: 392 KTERGFQCMKAALSVYVE 409
+ ++ C+ A+S VE
Sbjct: 383 EMKQAVDCVANAISTGVE 400
>gi|147819856|emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
Length = 494
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 147/475 (30%), Positives = 247/475 (52%), Gaps = 5/475 (1%)
Query: 21 FYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQ 80
F + + +LY +S L + LD WVK G V+ ++ + LR+ K++
Sbjct: 20 FSTATKDKEASLYWKLSALRGTEGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKH 79
Query: 81 ALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNC 140
A ++ +WM K D A+++DL+ + G AE+YF++L++ KT +TYGALLNC
Sbjct: 80 AAQIYEWM-EKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNC 138
Query: 141 YVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD 200
Y ++ DKA+ F+K+KE+ S L+YN+++ LY + GQ EKVP ++ EM+ K+I D
Sbjct: 139 YCKENMVDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPAD 198
Query: 201 NFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVL 260
++Y + +NSY + D E +E +L +M+ + + DW TY + A+ Y+ A KA+ L
Sbjct: 199 LYTYNLLMNSYASVKDFEAVEQVLEKMKKRG-VERDWFTYGNLANIYVDAGHTKKANYAL 257
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKL 320
+K E+ D + LI+LYA N V R W+ K A + N+ Y+ ML AL KL
Sbjct: 258 QKLEQNKNLHDPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKL 317
Query: 321 GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
G+ EK KEWE ++YD R+ N ++ Y N +++ A + E + ++G +
Sbjct: 318 GDVAGLEKCFKEWESGCSTYDVRLSNVMLESYLNREMIEEANLLSESIAKRGPELKLKTL 377
Query: 381 AVVAAGYFDAGKTERGFQCMKAALS-VYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
+ Y + + + + S E W P + IT L + V E F
Sbjct: 378 DLFMKFYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSAEKF 437
Query: 440 VAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL--VC 492
+R + ++ ++Y + ++ I GK + + MK DGI+ ET+++L VC
Sbjct: 438 CETMRKISRLDSKIYDSLLRTYIAAGKEEPLMSERMKDDGIEISSETEKLLQKVC 492
>gi|357142115|ref|XP_003572464.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 546
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 152/462 (32%), Positives = 246/462 (53%), Gaps = 9/462 (1%)
Query: 32 LYSIIS--PLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
LY+ +S P P + ELD W++ + +L +R LR + + +ALE+ DWM
Sbjct: 85 LYTRLSTLPPDAPLGCLAAELDQWLRERRPLSEQQLFSYVRKLRSYRHYKRALELMDWME 144
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
+G + HAV+L L+ +V+G +AE YF +L + K+ +TY +LLNCY R+ DK
Sbjct: 145 ARGASL-QLGHHAVRLGLVCKVNGLEAAEEYFWSLPEMFKSIKTYSSLLNCYAEHRKADK 203
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
L F KMK M I STL YN++M LY KT Q EK+P +M+ ++ D+F+Y +
Sbjct: 204 GLELFEKMKAMNITPSTLVYNNLMDLYLKTDQPEKIPTTFEQMRENHVRTDSFTYYMLTQ 263
Query: 210 SYGARSDLEGMEIILREME-SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
SY +DL+ E + E+E S P + WS Y A+ Y K DKA LKKAEE ++
Sbjct: 264 SYIMVNDLKSAEKFVEELEKSTP---VPWSLYTVLANNYNKLAQFDKAVLALKKAEEVMD 320
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
+ + ++ L+SLYAS GN SEV R+W+ K+A + INR Y+ ML AL KL + + ++
Sbjct: 321 RSEISAWHNLLSLYASSGNSSEVKRVWESLKSAFTKCINRSYLVMLSALKKLDDFDSLQQ 380
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ +EWE + YD RI N +I Y + AEA+ + + KG + ++ + Y
Sbjct: 381 LFQEWESTHERYDMRITNVMIEAYLAKDMTDEAEALRQTAMAKGHSNV-TTFYIFVVSYL 439
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
+ +T + A + V+ W P +++T L + V +EAF L+ +
Sbjct: 440 EKSRTSEALDIWRDAEKM-VKTPNWVPPKELVTRFLKHFEEAKDVDGMEAFWEHLKKLGC 498
Query: 449 MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
++ + Y A I+ G+ + ++ D ++ + +E+L
Sbjct: 499 LDAEAYGALIRTYAAAGRTNTSISRRIEEDRVEIGPDMEELL 540
>gi|255559466|ref|XP_002520753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540138|gb|EEF41715.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 247/441 (56%), Gaps = 5/441 (1%)
Query: 53 WVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVH 112
W G+KV+ +L RI+R+LRK KR+ ALEV +WM ++ P D+AV LDL+ +V
Sbjct: 59 WKTEGHKVQKYQLNRIVRELRKMKRYKHALEVCEWMTQERELKLLPGDYAVHLDLVAKVR 118
Query: 113 GFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI 172
G SAE +F +L D+ + +QT ALL+ YV+ + KA + KM++ + L YN +
Sbjct: 119 GLTSAEKFFEDLPDEMRGWQTCTALLHTYVKCKDVVKAEALMEKMRDCSFVKNPLPYNHM 178
Query: 173 MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH 232
+ LY G+++K ++ E+K K+ PD ++ + ++ + +D+E + + +
Sbjct: 179 ISLYIADGEFDKAKRIVEELK-KSTTPDVVTFNLWLSMCASLNDVESAKKV-LLELKKLK 236
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
I DW TY++ + Y+K L++ A LK+ E+R +K+ + Y+ L+SLY ++G+K V
Sbjct: 237 IEADWITYSTLTNLYLKNKLLEDAVSTLKEMEKRASRKNRLAYSSLLSLYTNMGDKDAVH 296
Query: 293 RLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
R+W+ K+ + + +Y ML +L+KL E E+AE + EWE + D ++ N ++ Y
Sbjct: 297 RIWNKMKSLFCKMNDAEYTCMLSSLIKLEEIEKAENLYTEWESVSGTGDPQVANILLAAY 356
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
N ++++E +VEKG +W ++ G+ + E+ C K A+++ K
Sbjct: 357 INRNQIEDSENFYRRMVEKGVCPCYTTWELLTWGHLKTKQMEKVLDCFKKAITIV---KT 413
Query: 413 WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELL 472
W PD +++ + L ++G+ + E F+ LR ++ ++Y++ ++ + GK +
Sbjct: 414 WSPDKRLVREVFKILEEKGNAEGAEEFLVMLRNAGYVSTEIYNSLLRTYAKAGKMPLIVT 473
Query: 473 DSMKADGIDEDEETKEILVCT 493
+ MK DG++ DEET ++ T
Sbjct: 474 ERMKKDGVELDEETHRLIKTT 494
>gi|302143279|emb|CBI21840.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 239/445 (53%), Gaps = 63/445 (14%)
Query: 6 KLSTNTQIHNAVFSRFYY-----TNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKV 60
+ + +T + VF Y T+ K +L S ISP + I P L+ W K G +
Sbjct: 6 RFAVDTSSISRVFRVLPYSTETLTSNAPKESLQSRISPAIDLRVSIVPALEQWRKEGRSI 65
Query: 61 RVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY 120
+ +L R+IR LR KR++ ALE+ +W+ K +P D A+QLDLI +VHG AE Y
Sbjct: 66 KQQDLHRLIRKLRTFKRYNHALEIYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKY 125
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
F+ + +++Q YGALLNCY +++ +KA + ++M++MG + TL+YN ++ LYS+ G
Sbjct: 126 FNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGF-VKTLSYNVMLGLYSRLG 184
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
++EK+ +++ EM+ I D+F+Y I +N+Y A SD+EGME +L ++E+ P + DW+ Y
Sbjct: 185 KHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAY 244
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
AA+ Y+KA+L +KA ++LK + +L+ DG EKT
Sbjct: 245 IVAANGYLKADLKEKAVEMLKNSLLKLDDMDGA------------------------EKT 280
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS-YDTRIPNAVIIGYCNNGLVQ 359
+EW LSGN +D R+PN +I YC GL++
Sbjct: 281 -----------------------------FEEW-LSGNKFFDFRVPNLLIRAYCKKGLLE 310
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
AE ++ +E+G+ +W +AAGY + + E+ +K AL +GWKP+P
Sbjct: 311 KAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKAL--LATSQGWKPNPVT 368
Query: 420 ITSILSKLGDEGSVQDVEAFVAALR 444
+++ L L +G V++ E + LR
Sbjct: 369 LSACLEYLKGKGDVEEAENLIRLLR 393
>gi|225450579|ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial [Vitis vinifera]
gi|296089781|emb|CBI39600.3| unnamed protein product [Vitis vinifera]
Length = 498
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/467 (31%), Positives = 245/467 (52%), Gaps = 5/467 (1%)
Query: 29 KTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM 88
+ +LY +S L + LD WVK G V+ ++ + LR+ K++ A ++ +WM
Sbjct: 32 EASLYWKLSALRGTEGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQIYEWM 91
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
K D A+++DL+ + G AE+YF++L++ KT +TYGALLNCY ++ D
Sbjct: 92 -EKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMLD 150
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
KA+ F+K+KE+ S L+YN+++ LY + GQ EKVP ++ EM+ K+I D ++Y + +
Sbjct: 151 KAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLM 210
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
NSY + D E +E +L +M+ + + DW TY + A+ Y+ A KA+ L+K E+
Sbjct: 211 NSYASVKDFEAVEQVLDKMKKRG-VERDWFTYGNLANIYVDAGHTKKANYALQKLEQNKN 269
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
D + LI+LYA N V R W+ K A + N+ Y+ ML AL KLG+ EK
Sbjct: 270 LHDPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEK 329
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
KEWE ++YD R+ N ++ Y N +++ A + E + ++G + + Y
Sbjct: 330 CFKEWESGCSTYDVRLSNVMLESYLNREIIEEANLLSESIAKRGPELKLKTLDLFMKFYL 389
Query: 389 DAGKTERGFQCMKAALS-VYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVI 447
+ + + + S E W P + IT L + V E F +R +
Sbjct: 390 KKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFCETMRKIS 449
Query: 448 PMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL--VC 492
++ ++Y + ++ I GK + + MK DGI+ ET+++L VC
Sbjct: 450 RLDSKIYDSLLRTYIAAGKEEPLMSERMKDDGIEISSETEKLLQKVC 496
>gi|242076656|ref|XP_002448264.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
gi|241939447|gb|EES12592.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
Length = 515
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 223/415 (53%), Gaps = 3/415 (0%)
Query: 30 TTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
+TLY I+ +G+ G + L W + ++ EL RI ++LRK +RF+ AL+V DWM
Sbjct: 80 STLYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIAKELRKFRRFNLALQVYDWMT 138
Query: 90 -RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
R+ + D A+QLDLI +V G AE YF L D K +TYG+LLN Y + +
Sbjct: 139 ERRDRFSLSSSDMAIQLDLIAKVRGVSHAEKYFDELPDAMKDKRTYGSLLNVYAQAMMKE 198
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
K F +M++ G A TL N +M Y +G+ +V ++ EMK +N+ D +Y I I
Sbjct: 199 KTEDTFEQMRKKGFASDTLPCNVLMNFYVDSGEPNEVLAIIDEMKERNVSFDVCTYNIWI 258
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
S A+ D E ME + +M + +V +W+TY + A YIK +KA + LK AE+R
Sbjct: 259 KSCAAKQDAEEMERVFSQMIADESVVANWTTYTTLASMYIKLGNSEKAEECLKDAEKRTT 318
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
++ +++L++LY+ LG K EV R+W+ K N Y +L AL+++G+ E AE
Sbjct: 319 GREKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGYQELLSALVRIGDIEGAEL 378
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ +EW +S+D + N ++ Y GL+ AE L VEKG PN+W ++A Y
Sbjct: 379 LYEEWASKSSSFDPKTMNILLAWYAKEGLITKAEQTLNRFVEKGGNPKPNTWEILATAYM 438
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
K CM+ A ++ K WKP P + S+L+ ++ + + V+ L
Sbjct: 439 KDDKISEALSCMEKATAIKSANK-WKPRPTNVESLLASFKEKNDAEGADRLVSVL 492
>gi|297814019|ref|XP_002874893.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320730|gb|EFH51152.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/442 (31%), Positives = 250/442 (56%), Gaps = 7/442 (1%)
Query: 53 WVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVH 112
W + G+ VR EL RI+R+LRK KR+ ALE+ +WM + D+AV LDLI ++
Sbjct: 77 WKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVLQEDIKLQAGDYAVHLDLISKIR 136
Query: 113 GFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI 172
G SAE +F +L D + + +LL+ YV+ + +DKA + F KM E G S L YN +
Sbjct: 137 GLNSAEKFFEDLPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHM 196
Query: 173 MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME-IILREMESQP 231
+ ++ GQ+EKV ++ E+K K PD +Y + + ++ + +D+EG E + L+ ES+
Sbjct: 197 LSMFISKGQFEKVSVLIKELKMKT-SPDIVTYNLWLTAFASGNDVEGAEKVYLKAKESKL 255
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
+ DW TY+ + Y K + ++KA LK+ E+ + +K+ + Y LISL+A+LG+K V
Sbjct: 256 NP--DWVTYSVLTNLYAKTDNLEKAKLALKEMEKLVSKKNRVAYASLISLHANLGDKDGV 313
Query: 292 LRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
W +++ K+ + +Y++M+ A++KLGE E+A+ + EWE + D RIPN ++
Sbjct: 314 NLTWKKVRSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAE 373
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
Y N + E E +VEKG + ++W ++ Y E+ C + A+ K
Sbjct: 374 YMNRDEILLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDLEKVLDCFEKAIDSV---K 430
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDEL 471
W + +++ ++ +L ++G+V+ E + L+ +N Q+Y++ ++ + G+ +
Sbjct: 431 KWTVNVRLVKAVCKELEEQGNVKGAEKLMTLLQKAGHVNTQLYNSLLRTYAKAGEMALIV 490
Query: 472 LDSMKADGIDEDEETKEILVCT 493
+ M D ++ DEETKE++ T
Sbjct: 491 EERMAKDNVELDEETKELIRLT 512
>gi|326531954|dbj|BAK01353.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 518
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 245/457 (53%), Gaps = 10/457 (2%)
Query: 39 LGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP 98
L +PG +D W + +V +LQR + LR+ +R+ ALE+ WM+ P
Sbjct: 57 LRSPGAAAA-AIDRWAQERGRVSRPDLQRAVSQLRRARRYGHALEILSWMDSHKEIKLLP 115
Query: 99 CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
DHA +LDLI +VHG AE Y++ L + LL+CYV +R KA S ++
Sbjct: 116 LDHAARLDLIAKVHGTSQAEEYYNKLPNSASREAASFPLLHCYVAERNVQKAESFMASLQ 175
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
+G+ + ++N++M LY T +YEKV V+ MK NI + SY + +N+ SD+
Sbjct: 176 SIGLPVDPHSFNEMMKLYVATCEYEKVFSVIDLMKRNNIPRNALSYNLWMNACSV-SDVT 234
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
++ + +EM + I + WSTY + A+ ++K L KA L+ AE +L +GY+F+
Sbjct: 235 SVQSVFKEMVNDGTIEVGWSTYCTLANIFMKHGLNSKAFACLRTAETKLSTAQRLGYSFV 294
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
++ YA+LG+ V+RLW+ K R + +Y++ + L+K+G+ + AE + WE+
Sbjct: 295 MTCYAALGDSDGVMRLWEASKCVPGRIPSANYMSAILCLIKVGDIDRAEWIFGSWEVECR 354
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+D R+ N ++ Y NG ++ AE + ++EKG +W ++ G+ + + ++
Sbjct: 355 KHDVRVSNVLLGAYVRNGWIEKAEKLHLHMLEKGGRPNYKTWEILMEGFVQSRQMDKAVN 414
Query: 399 CMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR----TVIPMNRQMY 454
MK ALS+ ++G W+P +++ +I + ++G+ D ++ L+ T +P+ + +
Sbjct: 415 AMKKALSL-MKGCHWRPPLRLVEAIATFFEEQGNTDDANRYIKVLQKFNLTSLPLYKSVL 473
Query: 455 HAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
A+IKA+ + E++ D I DEE +++
Sbjct: 474 RAYIKADTMLPTNISEMI---ARDDIVMDEEMDHLII 507
>gi|15235508|ref|NP_192191.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213327|sp|Q9SY07.1|PP302_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g02820, mitochondrial; Flags: Precursor
gi|4263527|gb|AAD15353.1| hypothetical protein [Arabidopsis thaliana]
gi|7269767|emb|CAB77767.1| hypothetical protein [Arabidopsis thaliana]
gi|332656833|gb|AEE82233.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 532
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 247/442 (55%), Gaps = 7/442 (1%)
Query: 53 WVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVH 112
W + G+ VR EL RI+R+LRK KR+ ALE+ +WM + D+AV LDLI ++
Sbjct: 84 WKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIR 143
Query: 113 GFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI 172
G SAE +F ++ D + + +LL+ YV+ + +DKA + F KM E G S L YN +
Sbjct: 144 GLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHM 203
Query: 173 MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME-IILREMESQP 231
+ +Y GQ+EKVP ++ E+K + PD +Y + + ++ + +D+EG E + L+ E +
Sbjct: 204 LSMYISRGQFEKVPVLIKELKIRT-SPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKL 262
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
+ DW TY+ + Y K + ++KA LK+ E+ + +K+ + Y LISL+A+LG+K V
Sbjct: 263 NP--DWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGV 320
Query: 292 LRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
W K++ K+ + +Y++M+ A++KLGE E+A+ + EWE + D RIPN ++
Sbjct: 321 NLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAE 380
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
Y N V E E +VEKG + ++W ++ Y E+ C A+ K
Sbjct: 381 YMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAIDSV---K 437
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDEL 471
W + +++ +L ++G+V+ E + L+ +N Q+Y++ ++ + G+ +
Sbjct: 438 KWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAKAGEMALIV 497
Query: 472 LDSMKADGIDEDEETKEILVCT 493
+ M D ++ DEETKE++ T
Sbjct: 498 EERMAKDNVELDEETKELIRLT 519
>gi|326533934|dbj|BAJ93740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 241/454 (53%), Gaps = 11/454 (2%)
Query: 32 LYSIIS--PLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
LY +S P P + ELD W+ + +L +R LR ++ +ALE+ DWM
Sbjct: 38 LYKRLSKLPPAAPLGCVAAELDRWLCERKPLCGHQLLFYVRKLRNFRQHRRALELMDWME 97
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
+G + P DHA++LDLI V+G +AE YF +L D K+ +TY +LL+CY + + +K
Sbjct: 98 ARGANLL-PGDHALRLDLICTVNGLEAAEEYFLSLPDMYKSVKTYSSLLHCYA-EHKAEK 155
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
AL + KM+ M I +TL Y ++M LY KTGQ EK+ EM+A + DNF+Y +
Sbjct: 156 ALELYEKMRTMNIVPNTLVYKNLMSLYLKTGQPEKILQTFEEMRANGVRTDNFTYYMLTE 215
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
S+ + LE E L ++E I + WS Y A Y K DKA LKKAEE +++
Sbjct: 216 SHIMLNGLESTEKFLEDLEKS--IPVHWSLYTRLADSYNKVGQFDKAGLTLKKAEEVMDR 273
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
+ ++ L+SLYAS GN SEV R+W ++ K NR Y+ ML AL KL + + ++V
Sbjct: 274 GEMFAWHNLLSLYASSGNLSEVKRVWSSLRSELKISSNRSYLVMLSALKKLDDFDCMQQV 333
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
+EWEL+ SYD RIPN +I Y + AEA+ + + +G + P ++ + Y +
Sbjct: 334 FQEWELTQESYDMRIPNVMIKAYLAKDMTDEAEALRQTAMAQGH-SNPLTFYIFTESYLE 392
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
+TE + + A + V+ W P P+++ L + V +E+F A L + +
Sbjct: 393 KSRTEAALEVWRDAGKM-VKTPNWAPPPELVKRFLKHFEEAKDVDGMESFCACLEKLECL 451
Query: 450 NRQMYHAFIKANIRNGKGVDELLDSMKADGIDED 483
+ A + + G+ + L S+ I+ED
Sbjct: 452 DTDARDALSRTYVAAGR---KNLSSVAHHQIEED 482
>gi|242057165|ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
gi|241929703|gb|EES02848.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
Length = 530
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 160/459 (34%), Positives = 246/459 (53%), Gaps = 19/459 (4%)
Query: 32 LYSIISPLGNPGT-RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM-N 89
LY +S LG G + L+ WV+ G R EL + +++LRK KR + ALEV DWM N
Sbjct: 66 LYRRLSALGIAGEGSVSRVLNKWVREGGAPRSEELVKHVKELRKYKRHAHALEVMDWMVN 125
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
+G+ + + +HA++LDLI +V G +AE+YF+NL D K ++TYGALL+CY + +K
Sbjct: 126 ARGMNM-SITNHAIRLDLIYKVRGLEAAENYFANLPDPAKNHRTYGALLSCYCSAKMEEK 184
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A +R+M E+G TL N++M LY K Q+ KV + EMK KNI PD+ + I +
Sbjct: 185 ATYLYRQMDELGFWSGTLPINNLMSLYMKLDQHRKVDSLFEEMKVKNIKPDSLTCCILMT 244
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
SY A + ++ +E +L+EM + + L WS Y++ A Y+ A ++KA LKK E +
Sbjct: 245 SYAASNKIDAIEELLKEM-VEKDVSLGWSAYSTLASIYVNAGQVEKAESALKKLEGLIGA 303
Query: 270 KDG-IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
+DG ++FL+SLYASLGN SE+ R+WD+ K N Y+ ML AL KL + + ++
Sbjct: 304 EDGRQPFDFLMSLYASLGNLSEINRVWDVIKAKFSTVTNISYLGMLHALYKLNDIDRMKQ 363
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ EWE + +YD R+ N +I G+ G+ + AE + E EKG + + Y
Sbjct: 364 IYMEWESNYQTYDVRLTNMMIRGHLRLGMSEEAETLREKAKEKGVEFDSKTCELFLDHYM 423
Query: 389 DAGKTERGFQCMKAALSVYVEG------KGWKPDPKVITSILSKLGDEGSVQDVEAFVAA 442
G M +AL+ +VE K K D I + E F
Sbjct: 424 GKGD-------MNSALN-WVENMTKLPKKAGKLDQDRIYKFQKYFEEHKDADSAERFCNC 475
Query: 443 LRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGID 481
LR + ++ + Y + ++ + GK L +K D I+
Sbjct: 476 LRMLGCIDGKAYESLLRTYLAAGKKSCSLRQQIKNDKIE 514
>gi|17064738|gb|AAL32523.1| Unknown protein [Arabidopsis thaliana]
gi|27311917|gb|AAO00924.1| Unknown protein [Arabidopsis thaliana]
Length = 532
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/442 (31%), Positives = 247/442 (55%), Gaps = 7/442 (1%)
Query: 53 WVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVH 112
W + G+ VR EL RI+R+LRK KR+ ALE+ +WM + D+AV LDLI ++
Sbjct: 84 WKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIR 143
Query: 113 GFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI 172
G SAE +F ++ D + + +LL+ YV+ + +DKA + F KM E G S L YN +
Sbjct: 144 GLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHM 203
Query: 173 MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME-IILREMESQP 231
+ +Y GQ+EKVP ++ E+K + PD +Y + + ++ + +D+EG E + L+ E +
Sbjct: 204 LSMYISRGQFEKVPVLIKELKIRT-SPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKL 262
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
+ DW TY+ + Y K + ++KA L++ E+ + +K+ + Y LISL+A+LG+K V
Sbjct: 263 NP--DWVTYSVLTNLYAKTDNVEKARLALREMEKLVSKKNRVAYASLISLHANLGDKDGV 320
Query: 292 LRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
W K++ K+ + +Y++M+ A++KLGE E+A+ + EWE + D RIPN ++
Sbjct: 321 NLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAE 380
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
Y N V E E +VEKG + ++W ++ Y E+ C A+ K
Sbjct: 381 YMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAIDSV---K 437
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDEL 471
W + +++ +L ++G+V+ E + L+ +N Q+Y++ ++ + G+ +
Sbjct: 438 KWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAKAGEMALIV 497
Query: 472 LDSMKADGIDEDEETKEILVCT 493
+ M D ++ DEETKE++ T
Sbjct: 498 EERMAKDNVELDEETKELIRLT 519
>gi|297843032|ref|XP_002889397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335239|gb|EFH65656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 243/465 (52%), Gaps = 5/465 (1%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
LY +S L G + L+ ++ G VR +L R +DLRK +R ALE+ DWM ++
Sbjct: 60 LYKKLSKLSVAGGTVAETLNQFIMEGITVRKVDLFRCAKDLRKFRRHQHALEIFDWMEKR 119
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQ-TYGALLNCYVRQRQTDKA 150
+ F+ DHA++LDLI + G +AE+YF+NL K +Q TYGAL+NCY + + KA
Sbjct: 120 KM-TFSVSDHAIRLDLIAKAKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEGKA 178
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+HF KM E+ ++L +N++M +Y + Q EKVP ++ MK + I P +Y I + S
Sbjct: 179 KAHFEKMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQS 238
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
G+ +DL+G+E I+ EM W+T+++ A + KA L +KA LK E+++
Sbjct: 239 CGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIFTKAGLYEKAESALKSMEKKMNPN 298
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
+ ++FLISLYA + +EV R+W+ K A N Y+ ML+A+ KLG+ + +K+
Sbjct: 299 NRDSHHFLISLYAGISKGTEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDIDGIKKIF 358
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
EWE +YD R+ N I Y + + AE IL+ +EK K + ++ +
Sbjct: 359 TEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMEKSKGPFSKARQLLMIHLLEN 418
Query: 391 GKTERGFQCMKAALSVYVEGKG-WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
GK + + ++ A+S E K W ++++ V E F L P+
Sbjct: 419 GKADLAMKHLETAVSDPAENKDEWSWSSELVSLFFLHFKRAKDVDGAEDFCKILSNWKPV 478
Query: 450 NRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL--VC 492
+ + IK K ++ + + I+ EE +++L VC
Sbjct: 479 DCETMSFLIKTYAAAEKTCPDMRERLSQHQIEVSEEIQDLLKTVC 523
>gi|255545872|ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547082|gb|EEF48579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 496
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/469 (31%), Positives = 254/469 (54%), Gaps = 6/469 (1%)
Query: 23 YTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQAL 82
YTN + L + I L +PG I L W+ NG+KV V +L+ I L K KR+ AL
Sbjct: 26 YTN----SNLKNQIMKLKSPGLNITSILQKWIDNGHKVTVSQLRYINGLLVKSKRYKHAL 81
Query: 83 EVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYG-ALLNCY 141
E+ WM + + D+A++L+LI +V+G AE YF+ + D T + ALL+ Y
Sbjct: 82 EIFTWMETQKNFRMSVSDYALRLELIIKVNGIEEAEEYFNFIPHDSVTRKAASFALLHGY 141
Query: 142 VRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDN 201
V+ + KA + K+ +G+ ++ +N++M LY T QYEKV V+ +MK I +
Sbjct: 142 VKVKDVVKAEALMMKLYNLGLIVNCYPFNEMMKLYMATSQYEKVALVIDQMKRNKIALNL 201
Query: 202 FSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK 261
SY + ++SYG S + +E++ +EM + ++ + WST A+ A+ Y KA ++DKA LK
Sbjct: 202 LSYNLWMSSYGEVSKVVKVELVYKEMVNDDNVEVGWSTLATLANIYTKAGIVDKALLALK 261
Query: 262 KAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLG 321
AE+ L +GY FL++ Y+SL NK V RLW+ K R +Y+ +L L+K+G
Sbjct: 262 NAEKILSTSHLLGYFFLMTQYSSLKNKEGVQRLWEACKGVNGRITCANYMCVLSCLVKVG 321
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+ EAEKV ++WEL+ YD R+ N ++ Y GL+ AE++ +++G +
Sbjct: 322 DLLEAEKVFRDWELNCRKYDIRVSNVLLGAYVRKGLMNKAESLHLHTLDRGGCPNYKTLE 381
Query: 382 VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
++ G+ + K ++ M A+S+ +E W+P +I SI L + +D F+
Sbjct: 382 ILMEGWVKSQKMDKAIDAMTQAISM-LEHCHWRPSHGIIMSIAEHLERNRNFEDANHFIQ 440
Query: 442 ALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ + + +Y ++ ++ + ++L M+ D I+ D+ET ++
Sbjct: 441 VIHHLGVASLPLYKVLLRMHLHAQRAAFDILKMMEKDKIELDDETSALV 489
>gi|356526773|ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Glycine max]
Length = 490
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/462 (30%), Positives = 246/462 (53%), Gaps = 3/462 (0%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
LY + G+ + L+N+VK+ +V E+ ++ LR RK + AL++S+ M +
Sbjct: 24 ALYMKLFKDGSSQLIVRQSLNNFVKSRKRVYKWEVGDTLKKLRDRKLYQPALKLSETMAK 83
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
+ + + DHA+ LDL+ + G +AE+YF +L + K + YGALLNCY ++ T+K+
Sbjct: 84 RNM-IKTVSDHAIHLDLLAKARGITAAENYFVSLPEPSKNHLCYGALLNCYCKELMTEKS 142
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
KMKE+ + LS++ YN +M LY+K GQ EK+P ++ EMKA N+ D+++Y + + +
Sbjct: 143 EGLMEKMKELSLPLSSMPYNSLMTLYTKVGQPEKIPSLIQEMKASNVMLDSYTYNVWMRA 202
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
A +D+ G+E + EM+ + DW+TY++ A ++ A L DKA LK+ E+R K
Sbjct: 203 LAAVNDISGVERVHDEMKRGGQVTGDWTTYSNLASIFVDAGLFDKAEVALKELEKRNAFK 262
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
D Y FLI+LY GN EV R+W + A + N Y+ M++ L+ L + AEK
Sbjct: 263 DLTAYQFLITLYGRTGNLYEVYRVWRSLRLAFPKTANISYLNMIQVLVNLKDLPGAEKCF 322
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+EWE +YD R+ N +I Y +++ AE + E +G + + Y
Sbjct: 323 REWECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERARRRGAKPNAKTLEIFMDYYLLK 382
Query: 391 GKTERGFQCMKAALSV-YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIP 448
G + + A+S+ G+ W P ++I+ ++ E V E F+ L ++V
Sbjct: 383 GDFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMMRHFEQEKDVDGAEEFLEILKKSVES 442
Query: 449 MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+++ + I+ G+ + +K + ++ E T+++L
Sbjct: 443 PGVEVFESLIRTYAAAGRISSAMQRRLKMENVEVSEGTQKLL 484
>gi|356536682|ref|XP_003536865.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Glycine max]
Length = 593
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 246/469 (52%), Gaps = 12/469 (2%)
Query: 29 KTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM 88
K LY ++S L G + LD ++ G ++ EL+R + LRK +RF ALE+ +WM
Sbjct: 27 KPNLYRMLSALDITGGTVSQTLDQYIMEGKVIKKPELERCVEQLRKYRRFQHALEIIEWM 86
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
+ + F+ ++AVQLDL+ + G +AE++F L K TYGALLNCY ++ D
Sbjct: 87 EIRKVN-FSWSNYAVQLDLVSKTKGVDAAENFFGGLPPPAKNRYTYGALLNCYCKELMKD 145
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
KALSHF M E+G ++ L +N++M L+ K G+ +KVP ++ MK + I F+Y I +
Sbjct: 146 KALSHFDTMDELGY-VTNLAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWM 204
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
NS + +DL G E + EM+++ + W TY++ A Y+K +KA +LK EE+++
Sbjct: 205 NSCASSNDLGGAERVYEEMKTENEGQIGWHTYSNLASIYVKFKDFEKAEMMLKMLEEQVK 264
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
K Y+ L+ LYA GN EV R+WD K+ N Y+ ML L +L + E K
Sbjct: 265 PKQRDAYHCLLGLYAGTGNLGEVHRVWDSLKSVSP-VTNFSYLVMLSTLRRLNDMEGLTK 323
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
KEWE S SYD R+ + + + N +++ AE + E+ + K +
Sbjct: 324 CFKEWEASCVSYDARLVSVCVSAHLNQNMLEEAELVFEEASRRSKGPFFRVREEFMKFFL 383
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
+ + + ++AALS V+G W+P P+V+ + L +E V V+ L+
Sbjct: 384 KKHELDAAVRHLEAALS-EVKGDKWRPSPQVVGAFLKYYEEETDVDGVDELSKILKA--- 439
Query: 449 MNRQMYHAFIKANIRNGKGVDELLDSMKADG-IDEDEETKEILVCTMEK 496
++IK+ I K E+ MK D + +ET+ L+ MEK
Sbjct: 440 --NNFDDSWIKSCITASKSSPEIDPGMKEDSQVYHAQETR--LLDIMEK 484
>gi|357440753|ref|XP_003590654.1| WD repeat-containing protein [Medicago truncatula]
gi|355479702|gb|AES60905.1| WD repeat-containing protein [Medicago truncatula]
Length = 562
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 240/446 (53%), Gaps = 10/446 (2%)
Query: 50 LDNWVKNGNKV-RVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLI 108
++ W + G+ + R +L R+IR+LRK KR+ ALEV +WM + D+AVQLDLI
Sbjct: 56 INKWKEEGHTLPRKYQLNRMIRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVQLDLI 115
Query: 109 GRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLT 168
+V G SAE +F +L D + T ALL+ YV+ T+KA + KM E G S +
Sbjct: 116 TKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLTNKAEALMSKMSECGFLRSPVP 175
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
YN +M LY G+ EKVP + E+K N PD ++ + + + + +D+E E +L +++
Sbjct: 176 YNRMMSLYISNGKLEKVPKLFEELKV-NTSPDVVTFNLLLTACASENDVETAERVLLQLK 234
Query: 229 SQPHIVLDWSTYASAAHFYIKANLID----KASDVLKKAEERLEQKDGIGYNFLISLYAS 284
+ + DW TY++ + YI+ +D KA+ LK+ E+R ++ + Y+ L+SL+A+
Sbjct: 235 -KAKVDPDWVTYSTLTNLYIRNASVDDCLEKAASTLKEMEKRTSRETRVAYSSLLSLHAN 293
Query: 285 LGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
+GN EV R+W K + + +Y+ M+ +L+KLG+ E + KEWE + D R+
Sbjct: 294 MGNVDEVNRIWGKMKACFCKMSDDEYVCMISSLVKLGDFAGVENLYKEWESVSGTNDVRV 353
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
N ++ Y + G ++ AE LVEKG + +SW ++ GY ++ A+
Sbjct: 354 SNLLLTSYVDQGQMEMAEIFCNQLVEKGVCLSYSSWELLTRGYLKKKDVKKFLHYFGKAI 413
Query: 405 SVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRN 464
S K W PDP+++ + + ++ ++ E + LR +N +Y+ F+K
Sbjct: 414 S---SVKQWIPDPRLVQEAFTVIQEQAHIEGAEQLLVILRNAGHVNTNIYNLFLKTYAAA 470
Query: 465 GKGVDELLDSMKADGIDEDEETKEIL 490
GK + + MK D + D+ET +L
Sbjct: 471 GKMPLVVAERMKKDNVQLDKETHRLL 496
>gi|359497206|ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 212/363 (58%), Gaps = 4/363 (1%)
Query: 84 VSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVR 143
+S WM+ K P D A++++LI +VHG E+YF+N+ + KTYQ Y ALLNCY
Sbjct: 102 ISQWMSDKRYIPLMPRDIALRMNLILKVHGLEQVENYFNNIHKNLKTYQVYIALLNCYAL 161
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
++ DKA + ++++++G + L YN +M +Y + G +EK+ ++ EM+ K IF D F+
Sbjct: 162 EKSVDKAEAIMQRLRDLGFVRTALGYNTLMNVYYRMGNWEKLDILMHEMEEKGIFCDKFT 221
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
I +++Y A S++ G++ I+ MES P I+LDW++YA AH Y+K L+DK ++KK
Sbjct: 222 LAIRLSAYAAASNIVGIDNIVTRMESDPRIILDWNSYAVVAHGYLKVGLVDKTLVMMKKL 281
Query: 264 EERLEQK-DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGE 322
EE ++ K + ++ L+ LYA + E+ R+W L K K Y N+ Y+ M+ +L+K +
Sbjct: 282 EELIDAKGSNVAFDNLLKLYAETRQRDELDRVWMLYKKKEKIY-NKGYMAMISSLLKFDD 340
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
+ AEKVL+EWE SYD R+PN +I YC GL + AEA++ ++ KG ++W
Sbjct: 341 IDAAEKVLEEWESRRLSYDFRVPNFLIDAYCRKGLTEKAEALVNKILTKGGNPLVDTWFY 400
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAA 442
+A GY + + + + +K A V V WKP + + L L V+ F+
Sbjct: 401 LANGYLEDSQIPKAVEALKKA--VVVCPPNWKPSKNTLATCLEYLEGNRDVEGAGEFIRF 458
Query: 443 LRT 445
L+
Sbjct: 459 LQN 461
>gi|297603118|ref|NP_001053460.2| Os04g0544400 [Oryza sativa Japonica Group]
gi|255675659|dbj|BAF15374.2| Os04g0544400 [Oryza sativa Japonica Group]
Length = 571
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 238/454 (52%), Gaps = 8/454 (1%)
Query: 30 TTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
++LY I+ +G+ G + L W + ++ EL RI R+LRK +RF+ AL+V DWM
Sbjct: 76 SSLYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMT 134
Query: 90 -RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
R+ + D A+QLDLI +V G AE YF L D K +TYG+LLN Y + +
Sbjct: 135 ERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKE 194
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
K S F +M++ G A TL +N +M Y + EKV ++ EM +N+ D +Y I I
Sbjct: 195 KTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWI 254
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
S A D + ME + +M +V +W+TY + A +IK +KA + LK+AE+R
Sbjct: 255 KSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT 314
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
++ +++L++LY+ LG K EV R+W+ K N Y +L AL++LG+ E AE
Sbjct: 315 GREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAEL 374
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ +EW +S+D + N ++ Y G V AE L VEKG PN+W ++ Y
Sbjct: 375 LYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYL 434
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT-VI 447
G++ C++ A +V K W+P P + S+L+ ++ + + + LR+
Sbjct: 435 KDGQSSEALSCLEKATAVASPSK-WRPRPTNVESLLANFKEKNDAESADRLMNVLRSRRC 493
Query: 448 PMNRQMYHAFI----KANIRNGKGVDELLDSMKA 477
N + + + K R KG + ++++KA
Sbjct: 494 EENEEQSDSHVASRPKGPTRPSKGPNSRMETLKA 527
>gi|255647669|gb|ACU24296.1| unknown [Glycine max]
Length = 484
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 147/451 (32%), Positives = 235/451 (52%), Gaps = 9/451 (1%)
Query: 29 KTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM 88
K LY ++S L G + LD ++ G ++ EL+R + LRK +RF ALE+ +WM
Sbjct: 27 KPNLYRMLSALDITGGTVSQTLDQYIMEGKVIKKPELERCVEQLRKYRRFQHALEIIEWM 86
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
+ + F+ ++AVQLDL+ + G +AE++F L K TYGALLNCY ++ D
Sbjct: 87 EIRKVN-FSWSNYAVQLDLVSKTKGVDAAENFFGGLPPPAKNRYTYGALLNCYCKELMKD 145
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
KALSHF M E+G ++ L +N++M L+ K G+ +KVP ++ MK + I F+Y I +
Sbjct: 146 KALSHFDTMDELGY-VTNLAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWM 204
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
NS + +DL G E + EM+++ + W TY++ A Y+K +KA +LK EE+++
Sbjct: 205 NSCASSNDLGGAERVYEEMKTENEGQIGWHTYSNLASIYVKFKDFEKAEMMLKMLEEQVK 264
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
K Y+ L+ LYA GN EV R+WD K+ N Y+ ML L +L + E K
Sbjct: 265 PKQRDAYHCLLGLYAGTGNLGEVHRVWDSLKSVSP-VTNFSYLVMLSTLRRLNDMEGLTK 323
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
KEWE S SYD R+ + + + N +++ AE + E+ + K +
Sbjct: 324 CFKEWEASCVSYDARLVSVCVSAHLNQNMLEEAELVFEEASRRSKGPFFRVREEFMKFFL 383
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
+ + + ++AALS V+G W+P P+V+ + +E V V+ F +
Sbjct: 384 KKHELDAAVRHLEAALSE-VKGDKWRPSPQVVGAFFKYYEEETDVDGVDEFSKIFKA--- 439
Query: 449 MNRQMYHAFIKANIRNGKGVDELLDSMKADG 479
++IK+ I K E+ MK D
Sbjct: 440 --NNFDDSWIKSCITASKSSPEIDPGMKEDS 468
>gi|125549215|gb|EAY95037.1| hypothetical protein OsI_16851 [Oryza sativa Indica Group]
Length = 511
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 142/434 (32%), Positives = 228/434 (52%), Gaps = 3/434 (0%)
Query: 30 TTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
++LY I+ +G+ G + L W + ++ EL RI R+LRK +RF+ AL+V DWM
Sbjct: 76 SSLYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMT 134
Query: 90 -RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
R+ + D A+QLDLI +V G AE YF L D K +TYG+LLN Y + +
Sbjct: 135 ERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKE 194
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
K S F +M++ G A TL +N +M Y + EKV ++ EM +N+ D +Y I I
Sbjct: 195 KTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWI 254
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
S A D + ME + +M +V +W+TY + A +IK +KA + LK+AE+R
Sbjct: 255 KSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT 314
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
++ +++L++LY+ LG K EV R+W+ K N Y +L AL++LG+ E AE
Sbjct: 315 GREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAEL 374
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ +EW +S+D + N ++ Y G V AE L VEKG PN+W ++ Y
Sbjct: 375 LYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYL 434
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
G++ C++ A +V K W+P P + S+L+ ++ + + + LR+
Sbjct: 435 KDGQSSEALSCLEKATAVASPSK-WRPRPTNVESLLANFKEKNDAESADRLMNVLRSRRC 493
Query: 449 MNRQMYHAFIKANI 462
+ Y + I +
Sbjct: 494 EENEEYKSLINTYV 507
>gi|293332912|ref|NP_001168310.1| hypothetical protein [Zea mays]
gi|223947377|gb|ACN27772.1| unknown [Zea mays]
gi|414586053|tpg|DAA36624.1| TPA: hypothetical protein ZEAMMB73_688721 [Zea mays]
Length = 513
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 142/429 (33%), Positives = 228/429 (53%), Gaps = 3/429 (0%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN- 89
TLY I+ +G+ G + L W + ++ EL RI ++LRK +RF+ AL+V DWM
Sbjct: 79 TLYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIAKELRKFRRFNLALQVYDWMTE 137
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
R+ + D A+QLDLI +V G AE YF L D K +TYG+LLN Y + +K
Sbjct: 138 RRDRFPLSSSDMAIQLDLIAKVRGVPHAEKYFDELPDAMKDKRTYGSLLNVYAQAMMKEK 197
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
F +M++ G A TL N +M Y +G+ ++V ++ EMK +N+ D +Y I I
Sbjct: 198 TEETFEQMRKKGFASDTLPCNVLMNFYVDSGEPDEVLAIIDEMKERNVSFDVCTYNIWIK 257
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
S A+ D E ME + +M + +V +W+TY + A Y+K +KA + LK AE+R
Sbjct: 258 SCAAKQDAEEMEQVFSQMIADESVVANWTTYTTLASMYLKLGNSEKAEECLKDAEKRTTG 317
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
++ +++L++LY+ LG K EV R+W+ K N Y +L AL+++G+ E AE +
Sbjct: 318 REKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGYQELLSALIRIGDIEGAELL 377
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
+EW S+D + N ++ Y GL+ AE + VEKG PN+W ++A Y +
Sbjct: 378 YEEWASKSYSFDPKTMNILLAWYAKEGLITKAEQTVNRFVEKGGNPKPNTWEILATAYMN 437
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
K CM+ A +V K WKP P + ++L+ ++ + + V+ L +
Sbjct: 438 DDKISEALSCMEKATAVKSASK-WKPRPTNVETLLASFKEKNDAEGADRLVSVLTSRGCA 496
Query: 450 NRQMYHAFI 458
+ Y + I
Sbjct: 497 EDEEYKSLI 505
>gi|32488964|emb|CAE04345.1| OSJNBb0038F03.9 [Oryza sativa Japonica Group]
Length = 511
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 227/430 (52%), Gaps = 3/430 (0%)
Query: 30 TTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
++LY I+ +G+ G + L W + ++ EL RI R+LRK +RF+ AL+V DWM
Sbjct: 76 SSLYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMT 134
Query: 90 -RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
R+ + D A+QLDLI +V G AE YF L D K +TYG+LLN Y + +
Sbjct: 135 ERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKE 194
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
K S F +M++ G A TL +N +M Y + EKV ++ EM +N+ D +Y I I
Sbjct: 195 KTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWI 254
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
S A D + ME + +M +V +W+TY + A +IK +KA + LK+AE+R
Sbjct: 255 KSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT 314
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
++ +++L++LY+ LG K EV R+W+ K N Y +L AL++LG+ E AE
Sbjct: 315 GREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAEL 374
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ +EW +S+D + N ++ Y G V AE L VEKG PN+W ++ Y
Sbjct: 375 LYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYL 434
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
G++ C++ A +V K W+P P + S+L+ ++ + + + LR+
Sbjct: 435 KDGQSSEALSCLEKATAVASPSK-WRPRPTNVESLLANFKEKNDAESADRLMNVLRSRRC 493
Query: 449 MNRQMYHAFI 458
+ Y + I
Sbjct: 494 EENEEYKSLI 503
>gi|326505170|dbj|BAK02972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 242/445 (54%), Gaps = 6/445 (1%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L W + G V +L R++R+LRK +RF ALE+ +WM + P DHAV LDL+
Sbjct: 58 LRRWAEEGRAVHKYQLNRVVRELRKYRRFKHALEICEWMRTQPEIRLLPGDHAVHLDLVA 117
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+V G SAE +F ++ + K T +LL+ YV+ DKA + ++M + G L +
Sbjct: 118 KVRGLASAEKFFEDVPERAKGPSTCNSLLHAYVQHGARDKAEAMLKEMADAGYLTCALPF 177
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N +M LY G+ EKVP+++ E++ I PD +Y I + ++ ++ E + M+
Sbjct: 178 NHMMSLYMSVGELEKVPEMIKELRRYTI-PDLVTYNIWLTYCSRKNSVKSAEKVFDLMKD 236
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+V DW T++ A YI A L K D L + E+R +K+ Y+ L+++YASL ++
Sbjct: 237 D-RVVPDWMTFSLLASIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTMYASLSDRG 295
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+ R+W + +++ + +Y ML +L + G+ AE V EWE + D+RIPN ++
Sbjct: 296 NLDRVWSKMRQTFRKFSDAEYKCMLTSLTRFGDIAAAEFVYGEWESQSGTKDSRIPNTIL 355
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF-DAGKTERGFQCMKAALSVYV 408
Y NG ++ AE+ L+ +V+KG + ++W + GY + +T++ +C+K ALS
Sbjct: 356 SFYIKNGEMEKAESFLQYIVQKGVKPSYSTWELFVWGYLGNDERTDKVMECLKKALSSL- 414
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGV 468
+ W+P+P+++ ++ S++ +G ++ E + LR + ++Y+ ++ +
Sbjct: 415 --EKWEPNPQLVAALFSQIEKKGDIEAAEELLVVLRGAGYVTTEIYNLVLRTYAKAEMMP 472
Query: 469 DELLDSMKADGIDEDEETKEILVCT 493
+ + M D + D+ET+ +L T
Sbjct: 473 LIIDERMDQDKVSMDDETRRLLKST 497
>gi|356518447|ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 496
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 241/448 (53%), Gaps = 9/448 (2%)
Query: 48 PELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDL 107
P L NWV GN V +L+ I R L K KR+ ALEV +W+ + P DHA++L+L
Sbjct: 48 PALQNWVDQGNDVSPFQLRSIARTLVKSKRYHHALEVFEWIKNQKNFHMIPADHAMKLEL 107
Query: 108 IGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
I HG + AE YF NL D LL YVR R T KA + K+ E+G+ +S
Sbjct: 108 IIENHGLMEAEEYFMNLPDSAAKKAACLILLRGYVRDRDTSKAETFMLKLYELGLVVSPH 167
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG-----MEI 222
+N++M LY T +Y KVP V+ +MK I + SY + +N A S+ EG +E
Sbjct: 168 PFNEMMKLYLVTCEYRKVPLVIQQMKRNKIPCNVLSYNLWMN---ACSEEEGYVVAAVET 224
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+ R+M + ++ + W + A+ A+ Y KA KA VLK AE++L + +G+ FLI+LY
Sbjct: 225 VFRQMLNDRNVEVGWGSLATLANAYKKAGQSKKAILVLKDAEKKLSTCNRLGHFFLITLY 284
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
ASL +K VLRLW+ K R +YI +L L+KLG+ +A+++ EWE + YD
Sbjct: 285 ASLKDKEGVLRLWEASKAVRGRISCANYICILTCLVKLGDIVQAKRIFLEWESNCQKYDI 344
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA 402
R+ N ++ Y NGL++ AE++ ++KG + ++ GY + K + MK
Sbjct: 345 RVSNVLLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTLEILMEGYVNWQKMDEAIITMKR 404
Query: 403 ALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANI 462
AL++ ++ W+P ++ +I L +G+++ + ++ + + ++ +Y ++ ++
Sbjct: 405 ALAM-MKDCHWRPPHGIVLAIAEYLEKDGNLEYADKYITDIHNLGLVSLSLYKVLLRMHL 463
Query: 463 RNGKGVDELLDSMKADGIDEDEETKEIL 490
K +L M D ++ D ET IL
Sbjct: 464 SANKPPFHILKMMDEDKVEIDNETLSIL 491
>gi|357165075|ref|XP_003580262.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Brachypodium distachyon]
Length = 513
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 141/430 (32%), Positives = 226/430 (52%), Gaps = 3/430 (0%)
Query: 30 TTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
++LY I+ +G+ + L +W + ++ EL R+ R+LRK +RF+ AL+V DWM
Sbjct: 78 SSLYRRIA-VGHGRRPVGRTLADWDEGERRLDKWELCRVARELRKFRRFNLALQVYDWMT 136
Query: 90 -RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
R+ + D A+QLDL+ +V G AE YF +L D K +TYG+LLN Y + R +
Sbjct: 137 ERRDRFSLSSSDMAIQLDLVAKVRGVPHAEEYFESLPDPLKDKRTYGSLLNVYAQARMKE 196
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
K F +M++ G A TL +N +M Y + +KV V EMK +N+ D +Y I I
Sbjct: 197 KTEDTFEQMRKKGYASDTLPFNVLMNFYVDVEEPQKVSAVTDEMKERNVSFDVCTYNIWI 256
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
S+ A D +GM+ + +M + +V +W+TY + A +IK +KA LK+AE+R
Sbjct: 257 KSFAAMKDADGMDRVFNQMIADESVVANWTTYTTLASMHIKLGNFEKAEVCLKEAEKRTT 316
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
+D ++FLI+LY+ L K EV R+W+ K N Y +L AL++LG+ E AE
Sbjct: 317 GRDKKCFHFLITLYSYLQKKEEVYRIWNWYKATFSTIHNLGYQEVLSALVRLGDIEGAEL 376
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ +EW +S+D + N ++ Y G V AE L VEKG PN+W ++A+ Y
Sbjct: 377 LYEEWASKSSSFDPKTMNILLAWYSREGFVVKAEQTLNRFVEKGGNPKPNTWEILASAYL 436
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
+ CM+ A +V + W+P P + S+L+ + + + L +
Sbjct: 437 KDNQLSEALSCMEKAAAVKSASR-WRPRPSNVESLLAYFKENNDTDSADRLMGVLTSRGC 495
Query: 449 MNRQMYHAFI 458
+ Y + I
Sbjct: 496 AENEEYKSLI 505
>gi|356547012|ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20710, mitochondrial-like [Glycine max]
Length = 482
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/395 (34%), Positives = 229/395 (57%), Gaps = 5/395 (1%)
Query: 40 GNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPC 99
G+P + + P L+ WV+ G +V +L+ + L + +RF+ AL+V +WM+ + +P
Sbjct: 32 GDPLSSVSPILNQWVEEGREVTKLQLEDLAYRLTQSRRFTHALQVLEWMSNERNYELSPG 91
Query: 100 DHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
A Q++LI +VHG AE YF + DD+ ++ Y ALL CY + ++A + + +KE
Sbjct: 92 SIAKQINLISKVHGLEQAERYFRGIPDDKIEFKIYAALLRCYAEHKSVEEAEAVMKXIKE 151
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
+ T N ++ LY+K G+YEK+ ++ EMK K+I + +Y I +N+Y +D++G
Sbjct: 152 LHPVNITPCCNMMLELYAKKGKYEKLDRLMQEMKEKDIC-NASTYTIRLNAYVVVTDIKG 210
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE-QKDGIGYNFL 278
ME +L +ME+ P +DW TY +AA+ Y + + +K +++LKK+E + + +
Sbjct: 211 MEKLLMQMEADPVATVDWYTYMTAANGYRRVHNFEKVAEMLKKSEHLARGNTRRLAFESI 270
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
++YA +GNK EV RLW++ T+ K+ N YI ML +L KL E + AEK+L+EWE
Sbjct: 271 QTMYAIIGNKDEVYRLWNM-CTSLKKPNNSSYIRMLSSLAKLDEIDGAEKILEEWESKYA 329
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
++D RIPN +I YC G AEA + L++ GK +W +A GY E+ Q
Sbjct: 330 NFDVRIPNLMISAYCKWGQFDKAEAYIRRLLDGGKQLDGRTWDRLACGYKAGNDMEKAVQ 389
Query: 399 CMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
MK A+S + G+ +PDP + + + L ++G +
Sbjct: 390 AMKKAVSKNLGGR--RPDPFTLVACVKYLKEKGDL 422
>gi|147766620|emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
Length = 448
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 238/446 (53%), Gaps = 19/446 (4%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
I ++LY I + +P I P L+ W++ G V +LQ ++R ++ +RF ALE+S
Sbjct: 19 IQISSLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQ 78
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQ 146
WM + P D A++LDLI V + YGALL+ YVR++
Sbjct: 79 WMTDRRYFTLTPSDAAIRLDLISMVPWTXAGXD-------------AYGALLSGYVREKS 125
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
+KA + +KM+EM A S+ YN ++ LYS+TG + K+ ++ EM+ K I D F+
Sbjct: 126 VEKAEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQXKAIPCDAFTVXN 185
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE- 265
+ +Y A SD+ ME L ME PHI +DW+ Y+ AA Y+K LIDKA ++LKK E
Sbjct: 186 LMVAYVAASDISAMEKXLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESN 245
Query: 266 RLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEE 325
R + + L+SLYA +K E+ R+W+L K + + Y M+ L KL + E
Sbjct: 246 RPHLERXSAFKXLLSLYARTXHKQELYRVWNLYKPSYE--YPEAYSCMITCLTKLDDIEG 303
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
AEK+ +EWE YD R+ N ++ YC L AE+++ ++E+ + ++W ++A
Sbjct: 304 AEKIFQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEE-RMPYASTWNILAK 362
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
GY + + + + +K A+S V KGW+P+ ++ + + L +G+++++E +
Sbjct: 363 GYVEDKQMPKAVEMLKKAIS--VGRKGWRPNSIILDACIEYLEGQGNLEEIEEIARLCKN 420
Query: 446 VIPMNRQMYHAFIKANIRNGKGVDEL 471
+ + ++H ++ + K V +
Sbjct: 421 LGIPDGDIHHRLLRTSAAGEKSVSAI 446
>gi|449462348|ref|XP_004148903.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
gi|449491586|ref|XP_004158945.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
Length = 531
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 147/486 (30%), Positives = 259/486 (53%), Gaps = 5/486 (1%)
Query: 8 STNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQR 67
S NT + A +R + TL + L P + W + G VR EL R
Sbjct: 26 SENTALEGAAGTRVVSGKGGGRDTLGRRLMSLIFPKRSAVTAIRKWQEEGRTVRKYELNR 85
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+R+LRK KR+ ALEV +WM + P D+AV LDLI ++ G AE +F +L D
Sbjct: 86 NVRELRKLKRYKHALEVCEWMTLQKDMRLVPGDYAVHLDLICKIRGLNRAEKFFEDLPDK 145
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+ +LL+ YV+ ++KA + KM E G S L++N ++ L+ Q EKVP
Sbjct: 146 IREQSVCTSLLHAYVQNNLSEKAEALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPA 205
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
++ +K KN PD +Y + +N ++D E E I EM+ + I DW ++++ A+ Y
Sbjct: 206 LIEGLK-KNTKPDVVTYNLLLNVCTLQNDTEAAENIFLEMK-KTKIQPDWVSFSTLANLY 263
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
K L +KA+ LK+ E+ + + + + L+SLY +LG+K+EV R+W K++ ++ +
Sbjct: 264 CKNQLTEKAAATLKEMEKMAFKSNRLSLSSLLSLYTNLGDKNEVYRIWKKLKSSFRKMSD 323
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
R+Y+ M+ +L+KL E EEAEK+ EWE + DTR+ N ++ Y ++ AE+
Sbjct: 324 REYMCMISSLVKLNELEEAEKLYTEWESVSGTRDTRVSNVMLGAYIKKNQIEQAESFYNR 383
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+++KG + +W ++ GY + E+ + A++ K W D +++ + KL
Sbjct: 384 MLQKGTVPSYTTWELLTWGYLKENQMEKVLHFFRKAVN---RVKKWNADERLVKGVCKKL 440
Query: 428 GDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETK 487
++G++ VE + LR ++ ++Y++ ++ + GK + + M+ D + ++ET+
Sbjct: 441 EEQGNINGVEQLLLILRNAGHVDTEIYNSLLRTYAKAGKMPLIVAERMERDNVQLNDETR 500
Query: 488 EILVCT 493
E+L T
Sbjct: 501 ELLRLT 506
>gi|356536769|ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Glycine max]
Length = 516
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 239/445 (53%), Gaps = 6/445 (1%)
Query: 50 LDNWVKNGNKV-RVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLI 108
++ W + G++ R +L RI+R+LRK KR+ ALEV +WM + D+AV LDLI
Sbjct: 64 INKWKEEGHEPPRKYQLNRIVRELRKDKRYKHALEVCEWMTLQKDMKLVQGDYAVHLDLI 123
Query: 109 GRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLT 168
+V G SAE +F +L D + QT ALL+ YV+ DKA + KM E + ++ L
Sbjct: 124 TKVRGLNSAEKFFEDLPDRMRGKQTCSALLHAYVQNNLVDKAEALMLKMSECDLLINPLP 183
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
YN ++ LY G+ EKVP ++ E+K N PD ++ + + + +++D+E E +L E++
Sbjct: 184 YNHMISLYISNGKLEKVPKIIQELKM-NTSPDIVTFNLWLAACASQNDVETAERVLLELK 242
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
+ I DW TY++ + YIK ++KA +K+ E R +K + Y+ L+SL+ ++GNK
Sbjct: 243 -KAKIDPDWVTYSTLTNLYIKNASLEKAGATVKEMENRTSRKTRVAYSSLLSLHTNMGNK 301
Query: 289 SEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
+V R+W+ K + ++ + +YI M+ +L+KLG+ AE + +EWE + D R+ N +
Sbjct: 302 DDVNRIWEKMKASFRKMNDNEYICMISSLLKLGDFAGAEDLYREWESVSGTNDVRVSNIL 361
Query: 349 IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYV 408
+ Y N ++ AE +V+KG +W + GY E+ A+S
Sbjct: 362 LGSYINQDQMEMAEDFCNQIVQKGVIPCYTTWELFTWGYLKRKDVEKFLDYFSKAISSVT 421
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGV 468
+ W PD +++ + ++ + E + LR +N +Y+ F+K GK
Sbjct: 422 K---WSPDQRLVQEAFKIIEEQAHTKGAEQLLVILRNAGHVNTNIYNLFLKTYATAGKMP 478
Query: 469 DELLDSMKADGIDEDEETKEILVCT 493
+ + M+ D + DEET+ +L T
Sbjct: 479 MIVAERMRKDNVKLDEETRRLLDLT 503
>gi|226533322|ref|NP_001142217.1| uncharacterized protein LOC100274385 [Zea mays]
gi|194707648|gb|ACF87908.1| unknown [Zea mays]
gi|414870857|tpg|DAA49414.1| TPA: hypothetical protein ZEAMMB73_857299 [Zea mays]
Length = 472
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 223/417 (53%), Gaps = 9/417 (2%)
Query: 83 EVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYV 142
++S WM + + D A +LDLI +VHG A YF + + Q YG+LL CYV
Sbjct: 48 QLSFWMTDRRHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYV 107
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
+ DKA HF KM+EMG+ S+ Y +M LY +TGQ E+V + +M+ K + PD F
Sbjct: 108 EAKAVDKAEEHFAKMQEMGMT-SSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTF 166
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPH-IVLDWSTYASAAHFYIKANLIDKASDVLK 261
S + +Y A D++G+ +L ++ PH ++ W +ASAA ++K+ + A L
Sbjct: 167 SVEAMLAAYIAAEDVQGVGKVLD--KANPHEKLVTWHGHASAASLFMKSGMQVGAVMALV 224
Query: 262 KAEERLEQKDG-IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKL 320
+AE R+ K I Y FL+ Y LG +E R+W + K+ N Y++ L AL++
Sbjct: 225 EAERRISPKSSRIAYAFLLKTYTELGMHAEAGRIWSVYKSKVPP-CNTMYMSRLSALLRT 283
Query: 321 GEHEEAEKVLKEWELSGNSY-DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
+ + AE LKEWE Y D R+ N ++ YC GLV+ A A+++ ++KG+ N+
Sbjct: 284 NDIDGAEATLKEWETVPLRYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYANT 343
Query: 380 WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
W +A G+F G+ + AL W+PD + L+ D+ V E
Sbjct: 344 WYKLAGGFFKTGQVPEAVDMTRKALDSAT--PPWRPDLANVLMSLNHFVDQKDVGAAEEM 401
Query: 440 VAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCTMEK 496
V+ L+ ++P+ R +YH +K +R GK +LL+ MK DG++ DEET+ IL E+
Sbjct: 402 VSTLQKLVPLTRDVYHCLLKTYVRAGKPPSDLLERMKEDGLEADEETERILAGECER 458
>gi|223974825|gb|ACN31600.1| unknown [Zea mays]
Length = 515
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 248/458 (54%), Gaps = 17/458 (3%)
Query: 32 LYSIISPLGNPGT-RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM-N 89
LY +S LG+ G + L+ WV+ G R +L + +++LRK KR + ALE+ DWM N
Sbjct: 50 LYRRLSALGSAGEGSVSRVLNKWVREGGATRSDDLVKHVKELRKYKRHAHALELMDWMVN 109
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
+G+ + + +HA++L+LI +V G +AE+YF+NL D K ++TYG+LL+CY + +K
Sbjct: 110 ARGMNM-SHTNHAIRLELIYKVRGLEAAENYFANLPDPAKNHRTYGSLLSCYCSAKMEEK 168
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A + +R+M E+GI STL N++M LY K QY KV + EMK KN+ P++ + I +
Sbjct: 169 ATNLYRQMDELGIWSSTLPINNLMSLYMKLDQYRKVVSLFEEMKLKNVKPNSLTCCILMT 228
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE- 268
SY A + ++ +E +L+EM + + L WS Y++ A Y+ A KA LKK E +
Sbjct: 229 SYAALNKIDDIEELLKEM-VEKDVTLGWSAYSTLASIYVNAGQFGKAESALKKLEGLISA 287
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
D ++FL+SLYASLGN SEV R+W++ K+ + N Y+ ML AL KL + + ++
Sbjct: 288 HDDRQPFDFLLSLYASLGNLSEVNRVWNVIKSKFSKVTNTSYLGMLHALYKLNDIDRMKQ 347
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ EWE + ++D ++ N +I + G+ + AE ++E + E G + + Y
Sbjct: 348 IYMEWESNYETFDVKLTNMMIRSHLKVGMTEEAEMLVEKVKENGAEFDTKTCELFLDHYM 407
Query: 389 DAGKTERGFQCMKAALS-----VYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
G + M +AL+ + K K D I + E F L
Sbjct: 408 -------GTEDMNSALNWLENMTKLSKKAEKLDQDRIYKFQKYFEEHKDADGAERFCNCL 460
Query: 444 RTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGID 481
RT+ ++ + Y + ++ + GK L +K D ++
Sbjct: 461 RTLGCIDGKAYESLLRTYLAAGKKSCSLRQQIKNDKVE 498
>gi|356542147|ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Glycine max]
Length = 483
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 231/405 (57%), Gaps = 6/405 (1%)
Query: 30 TTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
+L + + +G+P + P L WV+ G +V +L+ ++ L + +RF+ AL+V +WM+
Sbjct: 22 ASLENRVFKVGDPVIPVSPILKQWVEEGREVTKLQLENLVYRLTQSRRFTHALQVLEWMS 81
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
+ +P + A Q++LI +V G AE YF + D + ++ Y ALL CY + ++
Sbjct: 82 NERNYELSPGNIAKQINLISKVRGLEQAEKYFRGIPDAKIEFKIYAALLRCYAEHKSVEE 141
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A + +K+KE+ T N ++ LY+K G+YEK+ ++ EMK K+I + +Y I +N
Sbjct: 142 AEAVLKKIKELHPVNITACCNMMLELYAKKGKYEKLDRLMQEMKEKDIC-NAGTYTIRLN 200
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
+Y +D++GME +L +ME P +DW TY +AA+ Y K + +K + +LKK+E
Sbjct: 201 AYVIATDIKGMEKLLMQMEVDPMATVDWYTYMTAANGYRKVHNFEKVAAMLKKSEHVARG 260
Query: 270 KDG-IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
K + Y + ++YA +GNK EV RLW++ + K N+ YI ML +L+KL + + AEK
Sbjct: 261 KTKRLAYESIQTMYAIIGNKDEVHRLWNMCTSPKKP--NKSYIRMLSSLVKLDDIDGAEK 318
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+L+EWE ++D RIPN +I YC G AEA + L++ GK +W +A GY
Sbjct: 319 ILEEWESVHENFDVRIPNLMISAYCKWGQFDKAEAYIRRLLDGGKHLDGRTWDRLACGYN 378
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
E Q MK A+S + G+ +PDP + + + L ++G +
Sbjct: 379 AGNDMENAVQAMKKAVSTNLAGR--RPDPFTLVACVKYLKEKGDL 421
>gi|357151797|ref|XP_003575907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 240/445 (53%), Gaps = 6/445 (1%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L W + G V+ +L R++R+LRK +RF ALE+ +WM + P DHAV LDL+
Sbjct: 50 LRRWTEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMRTQPEMKLLPGDHAVHLDLVA 109
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+V G SAE +F ++ + K T ALL+ YV+ DKA + R+M + G L +
Sbjct: 110 KVRGLASAEKFFEDVPERAKGPSTCNALLHAYVQNGVRDKAEAMLREMADAGYLTCALPF 169
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N +M +Y +G+ EKVP+++ E++ I PD +Y I + ++ ++ E + M+
Sbjct: 170 NHMMSMYMSSGELEKVPEMIKELRRYTI-PDLVTYNIWLTYCSRKNSVKTAEKVFDLMKD 228
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ DW T++ A YI A L K D L + E+R +K+ Y+ L++LYASL ++
Sbjct: 229 D-KVFPDWMTFSLMASIYINAGLHVKGRDALVEMEKRASRKERTAYSSLLTLYASLSDRG 287
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+ R+W + +++ + +Y ML +L + G+ AE V EWE + D+RIPN ++
Sbjct: 288 NLDRVWSKMREIFRKFSDTEYKCMLTSLTRFGDITAAESVYSEWESESGTRDSRIPNTIL 347
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF-DAGKTERGFQCMKAALSVYV 408
+ NG ++ AE+ L+ +++KG + ++W + GY + + ++ +C+K ALS
Sbjct: 348 SFHIKNGKMEMAESFLQHIMQKGVKPSYSTWELFVWGYLGNDERIDKILECLKKALSSL- 406
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGV 468
W+P+P+++ ++ S + G ++ E + LR + ++Y++ ++ +
Sbjct: 407 --DKWEPNPQLVAALFSLIEKRGDIEAAEELLVVLRGAGYVTTEIYNSVLRTYSKAEMMP 464
Query: 469 DELLDSMKADGIDEDEETKEILVCT 493
+ + M D + DEET+ +L T
Sbjct: 465 LIIDERMDQDKVSMDEETRGLLKLT 489
>gi|226530677|ref|NP_001151760.1| tetratricopeptide-like helical [Zea mays]
gi|195649553|gb|ACG44244.1| tetratricopeptide-like helical [Zea mays]
gi|223942137|gb|ACN25152.1| unknown [Zea mays]
gi|413916645|gb|AFW56577.1| Tetratricopeptide-like helical [Zea mays]
Length = 501
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 239/445 (53%), Gaps = 8/445 (1%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L W G V+ +L R++R+LRK RF ALE+ +WM + P DHAV LDL+
Sbjct: 51 LQRWADEGRTVQKYQLNRVVRELRKYGRFKHALEICEWMRTQPEMRLLPGDHAVHLDLVA 110
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+V G SA +F ++ + K T ALL+ YV+ +KA + +M +G L +
Sbjct: 111 KVRGLASATKFFEDMPERAKGPSTCNALLHAYVQNGAREKAEAMLAEMARVGYLTCALPF 170
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N +M LY TG+ E+VP+++ E++ + PD +Y I + + ++ E + M+
Sbjct: 171 NHMMSLYMATGELERVPEMIKELR-RYTLPDLVTYNIWLTYCSKKDSVKSAEKVFGLMKD 229
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+V DW T++ YI A L + + L + E+R +K+ Y+ L++LYASL ++
Sbjct: 230 DC-VVPDWMTFSLLGSIYINAGLHVEGRNALVEMEKRASRKERAAYSSLLTLYASLSDRG 288
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+ R+W+ + +++ + +Y ML +L++ + AE + EWE + + D+RIPN ++
Sbjct: 289 NLDRVWNKMRGTFRKFSDTEYKCMLTSLLRFDDIAAAESIFSEWESTSGTRDSRIPNTIL 348
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
Y NG+++ AE+ L+ +VEKG + ++W GY KT++ +CMK ALS
Sbjct: 349 SYYIKNGMIKKAESFLDHIVEKGVKPSYSTWEAFVWGYL-GDKTDKVLECMKKALSCL-- 405
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD 469
+ W+P+ ++ T+I S++ G ++ E + R + +MY++ ++ K +
Sbjct: 406 -EKWEPNHELATAIFSQIEKTGDIEAAEKLLVIFRDAEYVTTEMYNSVLR-TYAEAKLMP 463
Query: 470 ELLDS-MKADGIDEDEETKEILVCT 493
++D M+ D + D ETK +L T
Sbjct: 464 LIVDERMEQDKVAMDVETKRLLRLT 488
>gi|15217734|ref|NP_171739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173342|sp|Q9FZ24.1|PPR4_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02370, mitochondrial; Flags: Precursor
gi|9857533|gb|AAG00888.1|AC064879_6 Hypothetical protein [Arabidopsis thaliana]
gi|332189300|gb|AEE27421.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 240/465 (51%), Gaps = 5/465 (1%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
LY +S L G + L+ ++ G VR +L R + LRK +R A E+ DWM ++
Sbjct: 73 LYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKR 132
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQ-TYGALLNCYVRQRQTDKA 150
+ F+ DHA+ LDLIG+ G +AE+YF+NL K +Q TYGAL+NCY + + +KA
Sbjct: 133 KM-TFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKA 191
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+HF M E+ ++L +N++M +Y + Q EKVP ++ MK + I P +Y I + S
Sbjct: 192 KAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQS 251
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
G+ +DL+G+E I+ EM W+T+++ A Y KA L +KA LK EE++
Sbjct: 252 CGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPN 311
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
+ ++FL+SLYA + EV R+W+ K A N Y+ ML+A+ KLG+ + +K+
Sbjct: 312 NRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIF 371
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
EWE +YD R+ N I Y + + AE IL+ ++K K + ++ +
Sbjct: 372 TEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLEN 431
Query: 391 GKTERGFQCMKAALSVYVEGKG-WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
K + + ++AA+S E K W ++++ V E F L P+
Sbjct: 432 DKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKPL 491
Query: 450 NRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL--VC 492
+ + IK K ++ + + I+ EE +++L VC
Sbjct: 492 DSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQDLLKTVC 536
>gi|356510143|ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 530
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 147/449 (32%), Positives = 236/449 (52%), Gaps = 11/449 (2%)
Query: 48 PELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDL 107
P L NWV GN V EL+RI R L K K + ALEV W+ + P D+A++L+L
Sbjct: 73 PALKNWVDEGNDVSHSELRRIARTLVKSKCYHHALEVVKWIENQKNFHMIPADYAMKLEL 132
Query: 108 IGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
I + + AE YF NL D LL Y+R R T+KA + K+ E+G+ LS
Sbjct: 133 IIENYDLMEAEEYFMNLPDSAAKKAACLTLLRGYIRVRDTNKAETFMVKLYELGLVLSPH 192
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS------YGARSDLEGME 221
+N++M LY T +Y KVP V+ +MK + + SY + +N+ YG + +E
Sbjct: 193 PFNEMMKLYLATCEYRKVPLVMQQMKRNKVPCNVLSYNLWMNACTEEEGYG----VAAVE 248
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
+ R+M++ ++ + WS+ A+ A+ Y KA KA VLK AE +L + +GY FLI+L
Sbjct: 249 TVFRQMQNDRNVEVGWSSLATLANAYKKAGQSKKAILVLKDAERKLSTCNRLGYFFLITL 308
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
YASL K VLRLW+ K R +YI +L L+KLG+ +A+++ EWE + YD
Sbjct: 309 YASLKEKEGVLRLWEASKAVGGRISCANYICILICLVKLGDIVQAKRIFLEWESNCQKYD 368
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
R+ N ++ Y NG ++ AE++ ++KG + ++ GY + K + MK
Sbjct: 369 IRVSNVLLGAYARNGSMEEAESLHLHTLQKGGCPNYKTLEILMEGYVNWQKMDEAIITMK 428
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKAN 461
AL++ ++ W+P ++ +I L +G+++ ++ LR + +Y ++ +
Sbjct: 429 RALAM-MKDCHWRPPHGLVLAIAEYLEKDGNLKYANKYITDLRNFGLFSLSLYKILLRMH 487
Query: 462 IRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ K +L M D I+ D ET IL
Sbjct: 488 LSANKPPFHILKMMDEDKIEMDNETLSIL 516
>gi|125575304|gb|EAZ16588.1| hypothetical protein OsJ_32060 [Oryza sativa Japonica Group]
Length = 475
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 136/435 (31%), Positives = 236/435 (54%), Gaps = 23/435 (5%)
Query: 70 RDLRKRKRF-------SQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFS 122
R R +K F + + +S WM + +P D A +L+LI +VHG A YF
Sbjct: 45 RAFRGKKPFFGGFPGPNPGIPLSMWMTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFD 104
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
+ + + Q YG+LL CY + +KA F M+ MG+A ++ YN +M LYS+ GQ
Sbjct: 105 AVPNQLRELQCYGSLLRCYAEAERVEKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQV 163
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
E+V + M+ I PD F+ +++Y D+E +E +L + + + ++ W ++A
Sbjct: 164 ERVDSMYKAMEEGGIVPDIFTIDNLVSAYADVEDVEAIEKVLEK--ASCNNLMSWHSFAI 221
Query: 243 AAHFYIKANLIDKASDVLKKAEERL-EQKDG-IGYNFLISLYASLGNKSEVLRLWDLEKT 300
++KA + ++A +++E+R+ +KDG + Y FL+++YA L SEV R+WD+ ++
Sbjct: 222 VGKVFMKAGMQERALQAFQESEKRITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRS 281
Query: 301 -----ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
AC N Y+ + L+K+ + AEK +EWE +D+R+ N ++ YC
Sbjct: 282 KVPASAC----NTMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINILLTAYCKE 337
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
GL++ AEA+++ ++KG+ N+W +A GYF G+ + K AL+ WKP
Sbjct: 338 GLMEKAEALVDQFIKKGRTLFSNTWYKLAGGYFKVGQVSKAADLTKKALA--SASNEWKP 395
Query: 416 DPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSM 475
D + ++ ++ +V+ E + L+ ++P+ R +YH +K + G+ +LLD M
Sbjct: 396 DLANVLMSINYFAEQKNVEAAEEMASLLQRLVPLTRDVYHGLLKTYVNAGEPASDLLDRM 455
Query: 476 KADGIDEDEETKEIL 490
K DGI+ DEET +IL
Sbjct: 456 KKDGIEADEETDKIL 470
>gi|218195308|gb|EEC77735.1| hypothetical protein OsI_16848 [Oryza sativa Indica Group]
Length = 1300
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 219/409 (53%), Gaps = 3/409 (0%)
Query: 30 TTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
++LY I+ +G+ G + L W + ++ EL RI R+LRK +RF+ AL+V DWM
Sbjct: 76 SSLYRRIA-VGHGGRPVGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMT 134
Query: 90 -RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
R+ + D A+QLDLI +V G AE YF L D K +TYG+LLN Y + +
Sbjct: 135 ERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKE 194
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
K S F +M++ G A TL +N +M Y + EKV ++ EM +N+ D +Y I I
Sbjct: 195 KTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWI 254
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
S A D + ME + +M +V +W+TY + A +IK +KA + LK+AE+R
Sbjct: 255 KSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT 314
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
++ +++L++LY+ LG K EV R+W+ K N Y +L AL++LG+ E AE
Sbjct: 315 GREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAEL 374
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ +EW +S+D + N ++ Y G V AE L VEKG PN+W ++ Y
Sbjct: 375 LYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYL 434
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
G++ C++ A +V K W+P P + S+L+ ++ + +
Sbjct: 435 KDGQSSEALSCLEKATAVASPSK-WRPRPTNVESLLANFKEKNDAESAD 482
>gi|17529324|gb|AAL38889.1| unknown protein [Arabidopsis thaliana]
Length = 537
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 240/465 (51%), Gaps = 5/465 (1%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
LY +S L G + L+ ++ G VR +L R + LRK +R A E+ DWM ++
Sbjct: 73 LYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKR 132
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQ-TYGALLNCYVRQRQTDKA 150
+ F+ DHA+ LDLIG+ G +AE+YF+NL K +Q TYGAL+NCY + + +KA
Sbjct: 133 KM-TFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKA 191
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+HF M E+ ++L +N++M +Y + Q EKVP ++ +K + I P +Y I + S
Sbjct: 192 KAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAIKQRGISPCGVTYSIWMQS 251
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
G+ +DL+G+E I+ EM W+T+++ A Y KA L +KA LK EE++
Sbjct: 252 CGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPN 311
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
+ ++FL+SLYA + EV R+W+ K A N Y+ ML+A+ KLG+ + +K+
Sbjct: 312 NRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIF 371
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
EWE +YD R+ N I Y + + AE IL+ ++K K + ++ +
Sbjct: 372 TEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLEN 431
Query: 391 GKTERGFQCMKAALSVYVEGKG-WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
K + + ++AA+S E K W ++++ V E F L P+
Sbjct: 432 DKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKPL 491
Query: 450 NRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL--VC 492
+ + IK K ++ + + I+ EE +++L VC
Sbjct: 492 DSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQDLLKTVC 536
>gi|42570837|ref|NP_973492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|119935915|gb|ABM06033.1| At2g20710 [Arabidopsis thaliana]
gi|330251966|gb|AEC07060.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 395
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 223/402 (55%), Gaps = 10/402 (2%)
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQT 147
M+ + + D A++LDLI +V G AE +F + + + Y YGALLNCY ++
Sbjct: 1 MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 60
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
KA F++MKE+G L YN ++ LY +TG+Y V +L EM+ + + PD F+
Sbjct: 61 HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 120
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
+++Y SD+EGME L E+ + LDW TYA A+ YIKA L +KA ++L+K+E+ +
Sbjct: 121 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMV 180
Query: 268 E-QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
QK Y L+S Y + G K EV RLW L K Y N YI+++ AL+K+ + EE
Sbjct: 181 NAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFY-NTGYISVISALLKMDDIEEV 239
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
EK+++EWE + +D RIP+ +I GYC G+++ AE ++ LV+K + ++W +A G
Sbjct: 240 EKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALG 299
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV 446
Y AGK E+ + K A+ V GW+P V+ S + L EG +D+E LR +
Sbjct: 300 YKMAGKMEKAVEKWKRAIE--VSKPGWRPHQVVLMSCVDYL--EGQ-RDMEGLRKILRLL 354
Query: 447 IPMNRQMYHAFIKANIRNGKGVD-ELLDSMKADGIDEDEETK 487
Y + NG G+ +++D+M E+ E +
Sbjct: 355 SERGHISYDQLLYD--MNGAGLSWKIVDAMGKGRYVEEREVR 394
>gi|343172214|gb|AEL98811.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 204/348 (58%), Gaps = 2/348 (0%)
Query: 78 FSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGAL 137
+ AL++SD M KG+ + D A+ LDLIG+ HG +AE+YF +L + K + YGAL
Sbjct: 1 YYAALKLSDTMAWKGMNM-TISDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGAL 59
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI 197
LN Y ++ DKA + KMKE+G+ ++ ++YN +M LYSKTG EKVP ++ EMKA +I
Sbjct: 60 LNIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDI 119
Query: 198 FPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKAS 257
++Y + + + A D+ G+E +L EM+ + DW+TY++ A Y+++ + +KA
Sbjct: 120 MLQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFEKAE 179
Query: 258 DVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEAL 317
+ LK+ E+R +D Y FL++LY GN EV R+W + A + N Y+ M++ L
Sbjct: 180 NALKELEKRNTSQDLSPYQFLLTLYGKTGNLIEVYRVWRSLRLAFPKTPNVAYLNMIQRL 239
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
+ L + + AEK +WE S +YD RI N ++ Y +GL+Q A+ + + ++G
Sbjct: 240 VTLKDLKGAEKCFADWESSCTNYDIRIANVLMGAYIKDGLLQQAKELKKRACKRGAKPNA 299
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSV-YVEGKGWKPDPKVITSIL 424
+W + Y AG+ + C++ A+++ +G W P KV+ SI+
Sbjct: 300 KTWEIFLEHYLKAGEVKLAVDCVERAVAIGRGDGSKWVPSSKVVNSIM 347
>gi|224121664|ref|XP_002330622.1| predicted protein [Populus trichocarpa]
gi|222872226|gb|EEF09357.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 224/403 (55%), Gaps = 41/403 (10%)
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQT 147
M + F D AV+L LI RV G AE+YF+ L KT TYGA+LN VR++
Sbjct: 1 MTARRFFTFTTEDAAVRLGLIHRVRGLEEAENYFNKLSVKLKTKYTYGAILNGCVREKSV 60
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
KA + ++M+E G+ S+ YN ++ LYS+TG ++K+P ++ EM+ I D ++ R
Sbjct: 61 QKAEAVMQEMREGGMTTSSFPYNILIILYSQTGDFDKIPPLMKEMERNGIAEDKYTLRNL 120
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
I + A SD+ G+E IL+ ME P + LDW YA AA Y+K I+ A +L+K E+ +
Sbjct: 121 IAASVAASDISGVERILKLMEENPELGLDWKLYAMAADAYLKIGSIETALTMLEKLEKWM 180
Query: 268 E-QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+K +NFL+SLYA GNK E+ R+W+L K + + ++ Y M+++L KL + E A
Sbjct: 181 AFRKKKAVFNFLLSLYAKTGNKDELYRIWNLYKPSSES-MDTSYCCMIDSLTKLDDIEGA 239
Query: 327 EKVLKEWELS-GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
EK+ +EWE +YD R+ N +++ YCN GL + AEA +E V+ G+ ++W V+A
Sbjct: 240 EKIFEEWESQCTTTYDFRVLNGLLVAYCNRGLFEKAEAAIEKAVQ-GRTPYASTWHVMAK 298
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
GY + + + + +K A++V G+ WKPDP ++ + L E +AA
Sbjct: 299 GYMEHDQIPKTVEMLKRAVNV---GRDWKPDPILVNTCL------------ENSMAA--- 340
Query: 446 VIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKE 488
GK V+++L MK DG DEET++
Sbjct: 341 -------------------GKSVNDVLYQMKMDGFAVDEETQK 364
>gi|255553777|ref|XP_002517929.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542911|gb|EEF44447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/427 (32%), Positives = 233/427 (54%), Gaps = 5/427 (1%)
Query: 25 NRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEV 84
N+++ S I L +P + P LD WV GN VR L+ ++ ++ RF+ AL++
Sbjct: 3 NKLSFPLKSSRIVNLKDPKASVIPVLDQWVNEGNTVRKALLRSLVNLMKGFNRFNHALQI 62
Query: 85 SDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQ 144
S WM + +P D V+L+L+ R++G AE YF L D K + Y ALL+ YV++
Sbjct: 63 SQWMADRPNLTLSPSDVVVRLELVHRIYGSAHAEKYFEKLPDKFKCREVYCALLSGYVQE 122
Query: 145 RQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSY 204
KA + +M+ G+A S YN ++ LY K G YEK+ ++ EM+ + ++
Sbjct: 123 SSVRKAEAIMEEMRAKGMANSCFPYNLLINLYPKNGDYEKINMLIQEMETNGVVRGAYTM 182
Query: 205 RICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE 264
+ +Y A S++ GME IL ++E P + DW Y+ AA Y+K LI+KA +L+K E
Sbjct: 183 SNLMAAYVAASNISGMERILNQIEKDPQLGNDWRVYSVAASGYLKFGLIEKALTMLRKLE 242
Query: 265 ERLE-QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEH 323
+ + +K ++ L++LY G + E+ +W+ K + +TM+ +L KL +
Sbjct: 243 DVMPLEKKTSAFDILVTLYGKTGKRDELYLVWNTYKPLIE-LKETSVMTMISSLSKLDDI 301
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
+ AEK+ +EWE YD R+ N ++ YC GL++ AEA + K + +SW ++
Sbjct: 302 KGAEKIFREWESQCMMYDFRVLNTLLFAYCRKGLLKKAEAA-VEKAAKDRTPCASSWGIL 360
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
A GY + + + + +K ALS + G+GW+P+ +T+ L+ L +G V+ VE L
Sbjct: 361 AMGYIEHNQMYKAVEMLKKALS--ISGQGWRPNSMTLTACLNFLEKQGDVEGVEEVTKLL 418
Query: 444 RTVIPMN 450
+++ P+N
Sbjct: 419 KSLEPLN 425
>gi|326507912|dbj|BAJ86699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 226/446 (50%), Gaps = 17/446 (3%)
Query: 32 LYSIISPL--GNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
LY IS + G P + E+D W++ + ++ +R+L + K+ ALE+ DWM
Sbjct: 51 LYKRISKVSQGKPPGTVAAEMDEWLRQRRRPSQLQVLAYVRELTRFKKNESALELLDWME 110
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
+G +P A++LDLI +VHG +AE YF ++ D K+ +TY LLNCY + K
Sbjct: 111 SRG-ANLSPGHQAMRLDLISKVHGIQAAEEYFWSIPDISKSVKTYSCLLNCYGKHGLAYK 169
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
L + KMK I L YN +M LY K GQ EK+ EM+ I D F+Y I
Sbjct: 170 GLEFYEKMKAKSIVPDKLVYNYLMILYQKAGQPEKILSTFEEMRESGISADKFAYFTLIE 229
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
SY +DL+ E +L E++ + WS Y A+ YIK L KA +KKAEE +++
Sbjct: 230 SYITMNDLDAAEKVLAELQKVAPV--HWSLYTLMANNYIKLKLFGKAEVAIKKAEEGMDK 287
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
D + L+SL+A GN +EV R+W K+ K+ +NR Y+ ML+AL + + E +++
Sbjct: 288 ADLRSWYALLSLHAHCGNSTEVKRVWKSLKSTFKKCLNRSYLVMLQALSMIDDFESLQQI 347
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW-----AVVA 384
+EW+ S YD RI N VI Y + G++ AEAI + + +G W + A
Sbjct: 348 FQEWQSSHEHYDKRIANVVIKAYLDKGMIDEAEAIRQSTMAQG------HWHEGMVCIFA 401
Query: 385 AGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
Y D + ++ A ++ V + W P ++++ L + E+F+ L+
Sbjct: 402 EFYLDKSDVNAALEILRDAKNM-VMARKWVPSKELVSRFLKHYEESNDASGAESFLECLK 460
Query: 445 TVIPMNRQMYHAFIKANIRNGKGVDE 470
+ ++ + A + + G+ D+
Sbjct: 461 KLECLDLDAFEAAKQTYVVAGRASDD 486
>gi|115457716|ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|32490390|emb|CAE04700.1| OSJNBa0041M06.2 [Oryza sativa Japonica Group]
gi|38344779|emb|CAE01505.2| OSJNBb0026L04.10 [Oryza sativa Japonica Group]
gi|113564029|dbj|BAF14372.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|125543501|gb|EAY89640.1| hypothetical protein OsI_11170 [Oryza sativa Indica Group]
gi|125589896|gb|EAZ30246.1| hypothetical protein OsJ_14297 [Oryza sativa Japonica Group]
gi|215767374|dbj|BAG99602.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 524
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/502 (29%), Positives = 240/502 (47%), Gaps = 42/502 (8%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
LY + G+ + E+D ++ + + E+ +R LRK+ + AL++S+ M R+
Sbjct: 21 LYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRKQALYRPALKLSEVMARR 80
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
G+ D A++LDL+ + G +AE YF +L + KT+ TYGALLNCY + T+KA
Sbjct: 81 GMNPTV-SDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYGALLNCYCKDLMTEKAE 139
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
+ KMKE+ A + + YN +M LY+K Q+EKVP V+ +MKA ++ PD ++Y + + +
Sbjct: 140 ALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYNVWMRAL 199
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
AR D++G+E ++ EM+ + DW+TY++ A Y+ A L +KA LK+ E+ D
Sbjct: 200 AARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAALKELEKWNTSND 259
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
Y FLI+LYA N EV R+W K R N Y+ M++AL L + AE K
Sbjct: 260 LEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPGAEACFK 319
Query: 332 EW-------------------------------------ELSGNSYDTRIPNAVIIGYCN 354
EW EL YD R+ NA+I Y
Sbjct: 320 EWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHPKYDIRVANAMIKAYIT 379
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSV-YVEGKGW 413
G+ A A+ + +G +W + Y G + C A+ + G+ W
Sbjct: 380 EGMFDKAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKMVHWCADRAIKKGHSAGRIW 439
Query: 414 KPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP-MNRQMYHAFIKANIRNGKGVDELL 472
P +V +++ V E FV L+ V + ++ ++ GK + +
Sbjct: 440 VPPHEVTETLMDYFEKNKDVDGAEKFVEVLKKVQKDLGTVVFEPLVRTYAAAGKKLPGMR 499
Query: 473 DSMKADGIDEDEETKEIL--VC 492
+K + ++ EET ++L VC
Sbjct: 500 HRLKIENVEVSEETAKLLDSVC 521
>gi|242083618|ref|XP_002442234.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
gi|241942927|gb|EES16072.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
Length = 501
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 237/445 (53%), Gaps = 7/445 (1%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L W + G V +L R++R+LRK RF ALE+ +WM + P DHAV LDL+
Sbjct: 50 LRRWAEEGRTVEKYQLNRVVRELRKYGRFKHALEICEWMRTRPEMRLLPGDHAVHLDLVA 109
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+V G SA +F ++ + K T ALL+ YV+ +KA + +M G L +
Sbjct: 110 KVRGLASAVKFFEDMPERAKAPSTCNALLHAYVQHGAREKAEAMMAEMARAGYLTCALPF 169
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N +M LY +G+ E+VP+++ E++ + PD +Y + + + ++ E + M+
Sbjct: 170 NHMMSLYMASGELERVPEMIKELRRYTV-PDLVTYNMWLTYCSKKKSVKSAEKVFALMKD 228
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+V DW T++ YI A L + + L + E+ +K+ Y+ L++LYASL ++
Sbjct: 229 D-RVVPDWMTFSLLGSIYINAGLHVEGRNALVEMEKMASRKERAAYSSLLTLYASLSDRG 287
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+ R+W+ + +++ + +Y ML +L + + AE + +EWE + + D+RIPN ++
Sbjct: 288 NLDRVWNKMRETFRKFSDTEYKCMLTSLTRFNDIAAAEGLYREWESASGTRDSRIPNTIL 347
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
Y NG+++ AE+ L +VEKG + ++W + GY KT++ +C+K ALS
Sbjct: 348 SYYIKNGMIEKAESFLGQIVEKGVKPSYSTWELFIWGYLGDNKTDKVLECLKKALSSL-- 405
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD 469
+ W+P+ ++ T+I S++ G ++ E + R + +MY++ ++ K +
Sbjct: 406 -EKWEPNHELATAIFSQVEKTGDIEAAEKLLVVFRDAGYVTTEMYNSVLR-TYAEAKLMP 463
Query: 470 ELLDS-MKADGIDEDEETKEILVCT 493
++D M+ D + D ET+ +L T
Sbjct: 464 LIVDERMEQDKVAMDVETRRLLRLT 488
>gi|116309055|emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]
Length = 524
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 147/502 (29%), Positives = 240/502 (47%), Gaps = 42/502 (8%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
LY + G+ + E+D ++ + + E+ +R LRK+ + AL++S+ M R+
Sbjct: 21 LYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRKQALYRPALKLSEVMARR 80
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
G+ D A++LDL+ + G +AE YF +L + KT+ TYGALLNCY + T+KA
Sbjct: 81 GMNPTV-SDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYGALLNCYCKDLMTEKAE 139
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
+ KMKE+ A + + YN +M LY+K Q+EKVP V+ +MKA ++ PD ++Y + + +
Sbjct: 140 ALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYNVWMRAL 199
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
AR D++G+E ++ EM+ + DW+TY++ A Y+ A L +KA LK+ E+ D
Sbjct: 200 AARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAALKELEKWNTSND 259
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
Y FLI+LYA N EV R+W K R N Y+ M++AL L + AE K
Sbjct: 260 LEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPGAEACFK 319
Query: 332 EW-------------------------------------ELSGNSYDTRIPNAVIIGYCN 354
EW EL YD R+ NA+I Y
Sbjct: 320 EWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHPKYDIRVANAMIKEYIT 379
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSV-YVEGKGW 413
G+ A A+ + +G +W + Y G + C A+ + G+ W
Sbjct: 380 EGMFDQAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKMVHWCADRAIKKGHSAGRIW 439
Query: 414 KPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP-MNRQMYHAFIKANIRNGKGVDELL 472
P +V +++ V E FV L+ V + ++ ++ GK + +
Sbjct: 440 VPPHEVTETLMDYFEKNKDVDGAEKFVEVLKKVQKDLGTVVFEPLVRTYAAAGKKLPGMR 499
Query: 473 DSMKADGIDEDEETKEIL--VC 492
+K + ++ EET ++L VC
Sbjct: 500 HRLKIENVEVSEETAKLLDSVC 521
>gi|343172216|gb|AEL98812.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 202/348 (58%), Gaps = 2/348 (0%)
Query: 78 FSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGAL 137
+ AL++SD M KG+ + D A+ LDLIG+ HG +AE+YF +L + K + YGAL
Sbjct: 1 YYAALKLSDTMAWKGMNMTIN-DQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGAL 59
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI 197
LN Y ++ DKA + KMKE+G+ ++ ++YN +M LYSKTG EKVP ++ EMKA +I
Sbjct: 60 LNIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDI 119
Query: 198 FPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKAS 257
++Y + + + A D+ G+E +L EM+ + DW+TY++ A Y+++ + DKA
Sbjct: 120 MLQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFDKAE 179
Query: 258 DVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEAL 317
+ LK+ E+R ++ Y FL++LY GN EV RLW + A + N Y+ M++ L
Sbjct: 180 NALKELEKRNTSRELSPYQFLLTLYGKTGNLIEVYRLWRSLRLAFPKTPNVAYLNMIQRL 239
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
+ L + + AEK +WE S +YD RI N ++ Y +G +Q A+ + + ++G
Sbjct: 240 VTLKDLKGAEKCFADWESSCTNYDIRIANVLMGAYIKDGSLQQAKELKKRACKRGAKPNA 299
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSV-YVEGKGWKPDPKVITSIL 424
+W + Y AG+ + C++ A+++ +G W P V+ SI+
Sbjct: 300 KTWEIFLEHYLKAGEVKLAVDCVERAVAIGRGDGSKWVPSTNVVNSIM 347
>gi|297803972|ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
gi|297315706|gb|EFH46129.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
Length = 480
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 216/389 (55%), Gaps = 4/389 (1%)
Query: 23 YTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQAL 82
Y + + + LY ISPLG+P I P LD W GN EL+ +I++L K KRF AL
Sbjct: 29 YGSSMGRFGLYKRISPLGDPKISIVPVLDEWRGEGNYTSKEELRGMIKELIKYKRFVHAL 88
Query: 83 EVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYV 142
EVS WM+ + + D +++LI RV G AE +F N+ D K + +LL+CY
Sbjct: 89 EVSRWMSDRMFFPLSLTDFGTRINLISRVCGLGEAEVFFENIPKDMKGIAVFSSLLSCYA 148
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
R++ +KA MKE G+++ T YN +M +Y + + K+ D++ EM+ + D F
Sbjct: 149 REKSAEKAAKLVEAMKEAGVSMDTRCYNLMMNMYYQMNVHGKLDDLMLEMEQNGVSFDQF 208
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
+ I +++Y A S++EG+E + ++ S +DW+ Y++AA+ ++K LID+A+ +LKK
Sbjct: 209 TLSIRLSAYAAASNIEGIEKTIEKISSMSETAIDWTIYSAAANAFLKVELIDEATMMLKK 268
Query: 263 AEERLEQKDG-IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLG 321
EE + + G ++ L+ LY G K ++ R+W L ++ N Y M+ + +K G
Sbjct: 269 CEEFVNEDSGNEAFHTLLKLYGETGRKEDLSRVW-LRFKEERKVFNSGYKIMISSALKFG 327
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP-NSW 380
+ E EKV +WE SYD RIPN +I YC L + AE +L+ E + + P +++
Sbjct: 328 DIELVEKVFNQWESEKLSYDFRIPNLLINFYCEKDLTEKAELLLKK-AEGNRVSPPMDAY 386
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVE 409
+A Y + + + + ++ A+S +E
Sbjct: 387 ICLANIYLEGDEISKATEAIERAVSTQIE 415
>gi|302142021|emb|CBI19224.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 200/357 (56%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L NW+ G+KV +L+ + R L K KR ALE+ WM + + DHA++L+LI
Sbjct: 58 LQNWIDQGHKVTASDLRNVSRQLLKSKRHKHALEILAWMEAQNRFQMSAADHAIRLELII 117
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
++ AE YF +L + LL+ YV++R +KA + K+ ++G+ +S +
Sbjct: 118 KIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIEKAEALMLKLNDLGLTVSPHPF 177
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N++M LY T Q+E+VP V+ +MK I + SY + +++ S L E++ ++M
Sbjct: 178 NEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWMSACSEVSGLASAEMVYKDMVD 237
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
++ + WST ++ A+ Y+K+ LI KA+ LK AE++L + +GY FLI++YASL NK
Sbjct: 238 DKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLSAHNRLGYFFLITMYASLSNKE 297
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
EVLRLW+ K R + +Y+ +L L+KLG+ EAE++ +EWE YD R+ N ++
Sbjct: 298 EVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFREWESKCWKYDIRVSNVLL 357
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSV 406
Y G + AE++ +E+G +W ++ G+ + ++ MK S+
Sbjct: 358 GAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGWMKSQNMDKAINAMKKGFSI 414
>gi|357442213|ref|XP_003591384.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480432|gb|AES61635.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 226/417 (54%), Gaps = 4/417 (0%)
Query: 29 KTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM 88
K LY ++ L G + L+ ++ G + EL+R +++LRK +RF A E+ +WM
Sbjct: 89 KANLYRRLADLEKTGGTVSQTLNQYIIEGKALGKDELERCVQELRKYRRFHHAFEIMEWM 148
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
+ I F+ ++AV LDL+ +V G + AE++F++ K TYG+LLNCY ++ D
Sbjct: 149 MMRQIN-FSWDNYAVYLDLVSKVKGVVEAENHFNSFPPPAKNKYTYGSLLNCYCKELMLD 207
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
KALSHF KM E G L++L++ ++M +Y + Q KVP ++ MK + I F+Y + +
Sbjct: 208 KALSHFDKMDEFGY-LTSLSFTNLMSMYMRLSQPSKVPQLVNVMKERKIRMTEFTYILWM 266
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
NS A +DL +E + EM+ + +DW TY++ A YIKA +KA +LKK E ++
Sbjct: 267 NSCAALNDLGEVERVYEEMKREDEDKIDWKTYSNLAAIYIKAGFFEKAELMLKKVEGVMK 326
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
+ Y+FL+SLYA GN EV R+W K NR Y+ ML L +L + E K
Sbjct: 327 PRQRETYHFLLSLYAGTGNVKEVYRVWGTLKKITP-VTNRSYLIMLSNLRRLNDMEGIIK 385
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ KEWE SYD+R+ + Y + + + A + E+ ++ + + A
Sbjct: 386 LFKEWESRHVSYDSRLVGVAVQAYLSQNMDKEAVLVFEEALKSCRGPFFRIREMFMASLL 445
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
+ G+ + ++AALS + K ++P P+V+++ L +E + V+ LR+
Sbjct: 446 EKGQLDGAMSHLEAALSEASDYK-YQPSPQVVSAFLKYYEEETDLDGVDELSKILRS 501
>gi|242066836|ref|XP_002454707.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
gi|241934538|gb|EES07683.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
Length = 527
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 230/446 (51%), Gaps = 9/446 (2%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+D W + + EL+R I LR+ +R+ ALE+ WM + + DHA +LDLI
Sbjct: 76 IDRWARESVHISQPELRRAIAMLRRARRYEHALEIFSWMESCNSVLLSSWDHAARLDLIA 135
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+ +G AE Y++ L+ LL+CYV +R KA + +++ G+ + ++
Sbjct: 136 KAYGTSQAEEYYNKLQSPAARQAASFPLLHCYVTERNVQKAETFMAQLQSCGLPVDPHSF 195
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N+IM LY T QYEK V+ MK NI + SY + +N S + ++ + +EM +
Sbjct: 196 NEIMKLYIATFQYEKALSVIDLMKRNNIPRNVLSYNLWMNVCAEVSGVAPVQSVFQEMLN 255
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + WSTY + A+ + K L KA L+KAE +L +GY+F+++ YA+L +
Sbjct: 256 DETVEVGWSTYCTLANIFRKNGLNTKAQACLRKAETKLSPTGRLGYSFVMTCYAALNDSD 315
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
V+RLW+ K+ R +Y+T + +K+G+ +AE + WE +D R+ N ++
Sbjct: 316 GVMRLWEASKSVPGRIPAANYMTAMLCSIKVGDISQAEWIFGSWEAGCRKHDVRVSNVLL 375
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
Y N ++ AE + ++EKG +W ++ GY + + ++ CMK LS+ ++
Sbjct: 376 GAYVRNRWIEKAERLHLHMLEKGARPNYKTWEILMEGYVQSRQMDKAVGCMKKGLSL-LK 434
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR----TVIPMNRQMYHAFIKANIRNG 465
W+P +++ +I ++GS D ++ L+ T +P+ + + A+I A+I
Sbjct: 435 SCHWRPPLELMEAIGKHFEEQGSADDAYRYIKVLQRFNLTSLPLYKSLIRAYINADIVP- 493
Query: 466 KGVDELLDSMKADGIDEDEETKEILV 491
+L+ + D I DEE +++
Sbjct: 494 ---PNILEMIAKDQIVTDEEMDRLII 516
>gi|147803609|emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]
Length = 736
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 208/384 (54%), Gaps = 8/384 (2%)
Query: 78 FSQAL-EVSDWMNRKGICV-FAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYG 135
F +AL +V +WMN +G + D A+QLDLI +V G SAE YFS L D K + YG
Sbjct: 314 FVEALYKVYEWMNNRGERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYG 373
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
ALLN YV+ + DKA K++ G A + L +N +M LY + +KV +++EM K
Sbjct: 374 ALLNAYVQAKMRDKAEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNK 433
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
NI D +SY I ++S E ME + +M+ + I +W+T+++ A YIK +K
Sbjct: 434 NIQLDIYSYNIWLSSC---ESTERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEK 490
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLE 315
A + LKK E R+ +D + Y++LISLY S GNK+EV R W++ K+ N Y ++
Sbjct: 491 AEECLKKVESRITNRDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALIS 550
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKAT 375
+L+++G+ E AEK+ +EW +SYD RI N ++ Y G ++ AE L+ ++E G
Sbjct: 551 SLVRVGDLEGAEKIYEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKP 610
Query: 376 TPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK-GWKPDPKVITSILSKLGDEGSVQ 434
+W ++A G K C K A V EG GWKP P +++ L +E
Sbjct: 611 NSTTWEILAEGNTGVKKISDALSCFKRA--VLAEGSNGWKPKPVNVSAFLDLCEEEADTA 668
Query: 435 DVEAFVAALRTVIPMNRQMYHAFI 458
EA + LR + + + Y +
Sbjct: 669 TKEALMGLLRQMGCLEDEPYASLF 692
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 11 TQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIR 70
+QIH+ + + +Y IS + NP L+ W G ++ EL R+++
Sbjct: 39 SQIHSYGTVDYERRPLVKWNAVYRRISLMENPEMGSASVLNQWENEGKRLTKWELCRVVK 98
Query: 71 DLRKRKRFSQALEVS 85
+LRK KRF ALE++
Sbjct: 99 ELRKFKRFKMALELT 113
>gi|125536853|gb|EAY83341.1| hypothetical protein OsI_38557 [Oryza sativa Indica Group]
Length = 444
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 226/416 (54%), Gaps = 11/416 (2%)
Query: 81 ALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNC 140
L++ +WM + P DHAV LDL+ +V G SAE +F ++ + K T ALL+
Sbjct: 24 CLQICEWMRTQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHA 83
Query: 141 YVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD 200
YV+ + DKA + +M + G L +N +M LY +G+ EKVP+++ E++ I PD
Sbjct: 84 YVQHGRRDKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTI-PD 142
Query: 201 NFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVL 260
+Y I + ++ ++ E + M+ + +V DW T++ YI A L K D L
Sbjct: 143 LVTYNIWLTYCSKKNSVKAAEKVYDLMKDE-RVVPDWMTFSLLGSIYINAGLHVKGRDAL 201
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKL 320
+ E+R +K+ Y+ L++LYASL ++ + R+W + +++ + +Y ML +L +
Sbjct: 202 VEMEKRASRKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRF 261
Query: 321 GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
G+ EAE EWE + + D+RIPN ++ Y NG+++ AE L+ +V+KG + ++W
Sbjct: 262 GDIAEAESFYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTW 321
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
+ GY G+ ++ +C+K ALS + W P+P++ T+I S++ ++G ++ E +
Sbjct: 322 ELFVWGYLSDGRMDKVLECLKKALSCL---EKWDPNPQLATAIYSQIEEKGDIEAAEKLL 378
Query: 441 AALRTVIPMNRQMYHAFIKANIRNGKG---VDELLDSMKADGIDEDEETKEILVCT 493
R + ++Y++ ++ + VDE +D D + D+ET+ +L T
Sbjct: 379 VMFREAGYVTTEIYNSVLRTYAKAELMPLIVDERMDQ---DKVSMDDETRSLLRLT 431
>gi|293336604|ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea mays]
gi|223949449|gb|ACN28808.1| unknown [Zea mays]
Length = 536
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 146/524 (27%), Positives = 241/524 (45%), Gaps = 70/524 (13%)
Query: 24 TNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALE 83
T + + LY + G+ + E+D ++ + + E+ +R +R+ + +L+
Sbjct: 13 TKKYVEEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYRPSLK 72
Query: 84 VSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVR 143
+S+ M R+G+ D A++LDLI + G +AE YF +L + KT+ TYGALLN Y +
Sbjct: 73 LSEVMARRGMNPTV-SDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCK 131
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
+ T+KA S KMKE+ A + +++N +M +Y+K Q EKVP ++ +MKA ++ PD F+
Sbjct: 132 ELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFT 191
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
Y + + + A D+ G+E ++ EM+ + DW+TY++ A Y++A + +KA LK+
Sbjct: 192 YNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKEL 251
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEH 323
E+R D Y FLI+LY N EV R+W K R N Y+ M++ L L +
Sbjct: 252 EKRNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDL 311
Query: 324 EEAEKVLKEWEL---------------------------------SGN------------ 338
AE KEWE SG
Sbjct: 312 SAAEACFKEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAEDLQ 371
Query: 339 ----SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
YD R+ NA+I Y G++ A A+ + +G +W + Y G +
Sbjct: 372 PKHPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKTGDLK 431
Query: 395 RGFQCMKAALSV-YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-----IP 448
C A+ + G+ W P P V +++S + V E +V AL+ V P
Sbjct: 432 MAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALKKVQKDLGAP 491
Query: 449 MNRQMYHAFIKA--------------NIRNGKGVDELLDSMKAD 478
+ + + A N+ G+G +LLDS+ AD
Sbjct: 492 VFEPLVRTYAAAGKKFPGMRQRLKIENVEVGEGTAQLLDSICAD 535
>gi|413953408|gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 596
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 146/524 (27%), Positives = 241/524 (45%), Gaps = 70/524 (13%)
Query: 24 TNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALE 83
T + + LY + G+ + E+D ++ + + E+ +R +R+ + +L+
Sbjct: 73 TKKYVEEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYRPSLK 132
Query: 84 VSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVR 143
+S+ M R+G+ D A++LDLI + G +AE YF +L + KT+ TYGALLN Y +
Sbjct: 133 LSEVMARRGMNPTV-SDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCK 191
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
+ T+KA S KMKE+ A + +++N +M +Y+K Q EKVP ++ +MKA ++ PD F+
Sbjct: 192 ELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFT 251
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
Y + + + A D+ G+E ++ EM+ + DW+TY++ A Y++A + +KA LK+
Sbjct: 252 YNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKEL 311
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEH 323
E+R D Y FLI+LY N EV R+W K R N Y+ M++ L L +
Sbjct: 312 EKRNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDL 371
Query: 324 EEAEKVLKEWEL---------------------------------SGN------------ 338
AE KEWE SG
Sbjct: 372 SAAEACFKEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAEDLQ 431
Query: 339 ----SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
YD R+ NA+I Y G++ A A+ + +G +W + Y G +
Sbjct: 432 PKHPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKTGDLK 491
Query: 395 RGFQCMKAALSV-YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-----IP 448
C A+ + G+ W P P V +++S + V E +V AL+ V P
Sbjct: 492 MAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALKKVQKDLGAP 551
Query: 449 MNRQMYHAFIKA--------------NIRNGKGVDELLDSMKAD 478
+ + + A N+ G+G +LLDS+ AD
Sbjct: 552 VFEPLVRTYAAAGKKFPGMRQRLKIENVEVGEGTAQLLDSICAD 595
>gi|15240937|ref|NP_198098.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214236|sp|Q3E911.1|PP400_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27460
gi|332006308|gb|AED93691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 236/457 (51%), Gaps = 6/457 (1%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDW 87
N+ +L I+ G P + L + +G+ V + EL+ I + L + R+ AL++ +W
Sbjct: 37 NRNSLKEILRKNG-PRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEW 95
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT----YGALLNCYVR 143
M + F+ D A++LDLI + HG E YF L + + Y LL YV+
Sbjct: 96 MENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVK 155
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
+ +A + K+ +G ++ +N++M LY +GQYEKV V++ MK I + S
Sbjct: 156 NKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLS 215
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
Y + +N+ S + +E + +EM + + WS+ + A+ YIK+ +KA VL+ A
Sbjct: 216 YNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDA 275
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEH 323
E+ L + + +GY FLI+LYASLGNK V+RLW++ K+ C R +YI +L +L+K G+
Sbjct: 276 EKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDL 335
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
EEAE+V EWE +YD R+ N ++ Y NG ++ AE++ ++E+G +W ++
Sbjct: 336 EEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEIL 395
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
G+ E+ M V + W+P ++ +I E +++ A+V L
Sbjct: 396 MEGWVKCENMEKAIDAMHQVF-VLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDL 454
Query: 444 RTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGI 480
+ + +Y ++ + + ++ + MK D +
Sbjct: 455 HRLGLASLPLYRLLLRMHEHAKRPAYDIYEMMKLDKL 491
>gi|357110627|ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Brachypodium distachyon]
Length = 536
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 138/511 (27%), Positives = 238/511 (46%), Gaps = 53/511 (10%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
LY + G+ + E+D ++ + + E+ +R LR+++ + AL++++ M R+
Sbjct: 21 LYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRRQELYRPALKLTEVMARR 80
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
G+ D A++LDL+ + G +AE YF +L + KT+ TYGALLNCY ++ T+KA
Sbjct: 81 GMNPTV-GDQAIRLDLVAKSRGIAAAEKYFMDLPETSKTHLTYGALLNCYCKESMTEKAE 139
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
+ KMKE+ A + ++YN +M LY+K Q EKVP ++ +MKA ++ PD ++Y + + S
Sbjct: 140 ALMEKMKELNFAFTAMSYNSLMTLYTKVNQPEKVPSIIQDMKADDVLPDVYTYNVWMRSL 199
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
AR D+ G+E ++ EM+ +V DW+TY++ A Y++A L +KA LK+ E+R D
Sbjct: 200 AARQDISGVERVIEEMKRDGRVVPDWTTYSNLASIYVEAGLFEKAEAALKELEKRNTSND 259
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
Y FLI+LY N EV +W K R N Y+ M++ L L + AE K
Sbjct: 260 LEAYQFLITLYGRTQNLVEVHHVWRSLKRNNPRKANMSYLNMIQVLANLKDLPAAEACFK 319
Query: 332 EWE--------------------------------------------------LSGNSYD 341
EWE + YD
Sbjct: 320 EWEARYIRPPKTKAIDAVTTETSKLDQESSTTNASNNDSDAKGTEDKGMEEIDMKHPKYD 379
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
R+ NA++ Y G++ A A+ + +G +W + Y G + C
Sbjct: 380 IRVANALMKAYVTEGMLDKAVALKKRAKMRGGRLNSKTWEIFMEHYIKVGDLKNAHWCTD 439
Query: 402 AALSV-YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP-MNRQMYHAFIK 459
A+ + G+ W P V +++ + V E FV L+ V + ++ ++
Sbjct: 440 RAIKKGHSSGRIWVPPRDVTETLMGYFEKKKDVDGAEKFVEVLKKVQKDLGTVVFEPLVR 499
Query: 460 ANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
GK + +K + ++ EE +++
Sbjct: 500 TYAAAGKKFPGMRHRLKIENVEVSEEIAKLV 530
>gi|115449217|ref|NP_001048388.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|47497029|dbj|BAD19082.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497238|dbj|BAD19283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537919|dbj|BAF10302.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|125584008|gb|EAZ24939.1| hypothetical protein OsJ_08720 [Oryza sativa Japonica Group]
Length = 517
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 236/447 (52%), Gaps = 11/447 (2%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
++ W + +V EL+R + LR+ +R+ QALE+ WM+ +P DH V+LDLI
Sbjct: 69 VERWARERGRVSPPELRRDVVRLRRARRYEQALEILSWMDSHNDFRLSPSDHMVRLDLIA 128
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+VHG AE Y+ L LL+CYV +R KA + +++ G+ + ++
Sbjct: 129 KVHGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNVQKAETFMAELQRYGLPVDPHSF 188
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N+IM LY T QYEKV V+ MK NI + SY I +N+ S L ++ +EM +
Sbjct: 189 NEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLASVQSAFKEMLN 248
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + WSTY + A+ + K KA L+ AE +L +GY+F+++ YA+L ++
Sbjct: 249 DDMVEVGWSTYCTLANIFKKYGQSSKALACLRTAETKLSSTGRLGYSFIMTCYAALNDRD 308
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
V+RLW+ K R +Y++ + L+K+G+ AE WE +D R+ N ++
Sbjct: 309 GVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLL 368
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
Y NG ++ AE + ++EKG +W ++ G+ + + ++ MK LS+ ++
Sbjct: 369 GAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILMEGFVQSKQMDKAVNAMKKGLSL-LK 427
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR----TVIPMNRQMYHAFIKANIRNG 465
W+P +++ +I ++GSV+D + F+ L+ T +P+ + + A+I A+I
Sbjct: 428 TCHWRPPLELLEAIAKYFEEQGSVEDADRFIKVLQKFNLTSLPLYKSLLGAYINADI--- 484
Query: 466 KGVDELLDSMKA-DGIDEDEETKEILV 491
V + + M A D ID DEE ++++
Sbjct: 485 --VPQNIPQMIAGDQIDMDEEMDQLII 509
>gi|226502666|ref|NP_001140872.1| uncharacterized protein LOC100272948 [Zea mays]
gi|194701536|gb|ACF84852.1| unknown [Zea mays]
gi|413924212|gb|AFW64144.1| hypothetical protein ZEAMMB73_253479 [Zea mays]
Length = 525
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 233/454 (51%), Gaps = 9/454 (1%)
Query: 42 PGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH 101
P ++ W ++ V EL+R I LR+ +R+ QALE+ WM + DH
Sbjct: 66 PAGTAAAAVERWAQDRVHVSQPELRRAIGMLRRERRYEQALEIFSWMESCSSLRLSSWDH 125
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
A +LDLI + + AE Y++ L+ LL+CYV +R KA + +++ G
Sbjct: 126 AARLDLIAKAYSTSQAEEYYNKLQSPATRQAASFPLLHCYVMERDVQKAETFMAQLQSHG 185
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
+ + ++N+IM LY T QYEKV V+ MK NI + SY + +N+ S ++ ++
Sbjct: 186 LPVDPHSFNEIMKLYVATCQYEKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVSGVDSVQ 245
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
+ + M + + + WSTY + A+ + K L ++A L KAE +L +GY+F+++
Sbjct: 246 SVFQVMLNDETVKVGWSTYCTLANIFRKNGLNNEAQACLVKAEAKLSPAGRLGYSFVMTC 305
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
YA+L + V+R+W+ K+ R Y+ + +K+G+ +AE + +WE +D
Sbjct: 306 YAALNDSDGVMRMWEASKSVPGRIPTAYYMAAMSCSIKVGDISQAECIFGKWEAGCRKHD 365
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
R+ N ++ Y N ++ AE + ++EKG +W ++ GY + + ++ CMK
Sbjct: 366 VRVSNVLLGAYVRNRWIEKAERLHLHMLEKGACPNYKTWEILMEGYVQSRQMDKAVGCMK 425
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR----TVIPMNRQMYHAF 457
LS+ ++ W+P +++ +I ++GS D ++ L+ T +P+ + + A+
Sbjct: 426 KGLSL-LKSCHWRPPVELMEAIGKHFEEQGSADDAYRYIKVLQRFNLTSLPLYKSLIRAY 484
Query: 458 IKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
I A++ +L+ + D ID DEE +++
Sbjct: 485 INADVVP----PNVLEMIAKDQIDMDEEMDRLII 514
>gi|125541465|gb|EAY87860.1| hypothetical protein OsI_09282 [Oryza sativa Indica Group]
Length = 517
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 236/447 (52%), Gaps = 11/447 (2%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
++ W + +V EL+R + LR+ +R+ QALE+ WM+ +P DH V+L+LI
Sbjct: 69 VERWARERGRVSPPELRRDVVRLRRARRYEQALEILSWMDSHNDFRLSPSDHMVRLELIA 128
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+VHG AE Y+ L LL+CYV +R KA + +++ G+ + ++
Sbjct: 129 KVHGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNVQKAETFMAELQRYGLPVDPHSF 188
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N+IM LY T QYEKV V+ MK NI + SY I +N+ S L ++ +EM +
Sbjct: 189 NEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLASVQSAFKEMLN 248
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + WSTY + A+ + K KA L+ AE +L +GY+F+++ YA+L ++
Sbjct: 249 DDMVEVGWSTYCTLANIFKKYGQSSKALACLRTAETKLSSTGRLGYSFIMTCYAALNDRD 308
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
V+RLW+ K R +Y++ + L+K+G+ AE WE +D R+ N ++
Sbjct: 309 GVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLL 368
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
Y NG ++ AE + ++EKG +W ++ G+ + + ++ MK LS+ ++
Sbjct: 369 GAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILMEGFVQSKQMDKAVNAMKKGLSL-LK 427
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR----TVIPMNRQMYHAFIKANIRNG 465
W+P +++ +I ++GSV+D + F+ L+ T +P+ + + A+I A+I
Sbjct: 428 TCHWRPPLELLEAIAKYFEEQGSVEDADRFIKVLQKFNLTSLPLYKSLLGAYINADI--- 484
Query: 466 KGVDELLDSMKA-DGIDEDEETKEILV 491
V + + M A D ID DEE ++++
Sbjct: 485 --VPQNIPQMIAGDQIDMDEEMDQLII 509
>gi|358344191|ref|XP_003636175.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355502110|gb|AES83313.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 790
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 204/383 (53%), Gaps = 3/383 (0%)
Query: 71 DLRKRKRFSQALEVSDWMN-RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEK 129
D K L+V DWMN R + D A+QLDLI RVHG SAES+F NL +D K
Sbjct: 284 DFMKVMTNEHVLQVYDWMNNRPERFRISASDVAIQLDLIARVHGVSSAESFFLNLTNDLK 343
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+TYGALLN YV R +KA S M+ +L +N +M L Y+KV ++
Sbjct: 344 DKRTYGALLNAYVHSRSREKAESLLEVMRSKRYLTHSLPFNLMMTLSMNLKDYDKVDMLV 403
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+EMK KNI D ++Y I ++S G++ +E ME + +M P I+ +WST+++ A YIK
Sbjct: 404 SEMKEKNIQLDIYTYNIWLSSCGSQGSIEKMEQVFEQMLKDPTIIPNWSTFSTMAAMYIK 463
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
L +KA + LKKAE R+ +D + +++L+SLY S+GNK EV R+W+ K+ N
Sbjct: 464 MELFEKAQECLKKAEGRILGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLG 523
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ + +++ + E AEK+ +EW S D+RI N +I Y G + + +
Sbjct: 524 YHAVISSFVRMDDIERAEKLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMS 583
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP-KVITSILSKLG 428
E G +W +++ G+ + C++ A + + K WKP K +L +L
Sbjct: 584 EGGGCPNSTTWELLSEGHIAEKRVSEALSCLEKAF-MTSDSKSWKPKANKNCAEVLIELL 642
Query: 429 DEGSVQDVEAFVAALRTVIPMNR 451
+ + EA+ A + P NR
Sbjct: 643 RKSGYHNDEAYAAIISKDEPSNR 665
>gi|357137419|ref|XP_003570298.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Brachypodium distachyon]
Length = 513
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 238/455 (52%), Gaps = 13/455 (2%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA 102
G+ + ++ W + V +L+R + LR+ +R+ ALE+ WM+ + +P DHA
Sbjct: 55 GSAVAAAIERWAQERGHVSRPDLRRAVSQLRRARRYDHALEILSWMDSRKDLNLSPLDHA 114
Query: 103 VQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+LDLI +VHG AE Y+ L++ LL+CYV +R KA S ++ +G+
Sbjct: 115 ARLDLIAKVHGTCHAEEYYKKLRNAACREAASFPLLHCYVAERNVQKAESFMASLQSIGL 174
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+ ++N+++ LY T Q+EK V+ MK NI + SY + +N+ + ++
Sbjct: 175 PVDPHSFNEMLKLYVATCQFEKALAVIDLMKRSNIPRNVLSYNLWMNACSVLG-VASVQS 233
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+ +EM + + + WST+ + A+ +IK L KA L+ AE +L + +GY+F+++ Y
Sbjct: 234 VFKEMVNDGTVEVGWSTFCTLANIFIKHGLNSKALACLRTAETKLSPRQRLGYSFVMTCY 293
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL-SGNSYD 341
A L + V+RLW+ K+ R + +Y++ + +K+G+ +AE + WE G D
Sbjct: 294 ARLDDSDGVMRLWEASKSVPGRIPSANYMSTIICSIKVGDIAQAEWIFGSWEAECGRKND 353
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
R+ N ++ Y NG ++ AE + ++EKG +W ++ G+ + + ++ +K
Sbjct: 354 VRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILLEGFVQSRQMDKAVNAIK 413
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR----TVIPMNRQMYHAF 457
ALS+ + W+P +++ +I + + G+V D ++ L+ T +P+ + + A+
Sbjct: 414 KALSLS-KSCHWRPPLELVEAIATFFEEHGNVDDANRYIKVLQKFNLTSLPLYKSVLRAY 472
Query: 458 IKANIRNGKGVDELLDSMKA-DGIDEDEETKEILV 491
IKA+ V + M A D I DEE +++
Sbjct: 473 IKAD-----AVPPNISEMIARDQIIMDEEMDRLII 502
>gi|125591164|gb|EAZ31514.1| hypothetical protein OsJ_15655 [Oryza sativa Japonica Group]
Length = 531
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 194/368 (52%), Gaps = 2/368 (0%)
Query: 79 SQALEVSDWMN-RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGAL 137
S A +V DWM R+ + D A+QLDLI +V G AE YF L D K +TYG+L
Sbjct: 144 SLAKDVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSL 203
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI 197
LN Y + +K S F +M++ G A TL +N +M Y + EKV ++ EM +N+
Sbjct: 204 LNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNV 263
Query: 198 FPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKAS 257
D +Y I I S A D + ME + +M +V +W+TY + A +IK +KA
Sbjct: 264 AFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAE 323
Query: 258 DVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEAL 317
+ LK+AE+R ++ +++L++LY+ LG K EV R+W+ K N Y +L AL
Sbjct: 324 ESLKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSAL 383
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
++LG+ E AE + +EW +S+D + N ++ Y G V AE L VEKG P
Sbjct: 384 VRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKP 443
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
N+W ++ Y G++ C++ A +V K W+P P + S+L+ ++ + +
Sbjct: 444 NTWEILGTAYLKDGQSSEALSCLEKATAVASPSK-WRPRPTNVESLLANFKEKNDAESAD 502
Query: 438 AFVAALRT 445
+ LR+
Sbjct: 503 RLMNVLRS 510
>gi|125579556|gb|EAZ20702.1| hypothetical protein OsJ_36321 [Oryza sativa Japonica Group]
Length = 491
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 232/448 (51%), Gaps = 21/448 (4%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVS-DWMNRKGICVFAPCDHAVQLDLI 108
L W + G V+ +L R++ LRK +RF ALE + C C
Sbjct: 48 LRRWAEEGRTVQKYQLNRVVCQLRKYRRFKHALERKLSFFRGPRRCTSTSCQ-------- 99
Query: 109 GRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLT 168
R G SAE +F ++ + K T ALL+ YV+ + DKA + +M + G L
Sbjct: 100 -RSGGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAGYLTCALP 158
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
+N +M LY +G+ EKVP+++ E++ I PD +Y I + ++ ++ E + M+
Sbjct: 159 FNHMMSLYMSSGELEKVPEMIKELRRYTI-PDLVTYNIWLTYCSKKNSVKAAEKVYDLMK 217
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
+ +V DW T++ YI A L K D L + E+R +K+ Y+ L++LYASL ++
Sbjct: 218 DE-RVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTLYASLSDR 276
Query: 289 SEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
+ R+W + +++ + +Y ML +L + G+ EAE EWE + + D+RIPN +
Sbjct: 277 GNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESASGTRDSRIPNTI 336
Query: 349 IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYV 408
+ Y NG+++ AE L+ +V+KG + ++W + GY G+ ++ +C+K ALS
Sbjct: 337 LAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKVLECLKKALSCL- 395
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKG- 467
+ W P+P++ T+I S++ ++G ++ E + R + ++Y++ ++ +
Sbjct: 396 --EKWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYVTTEIYNSVLRTYAKAELMP 453
Query: 468 --VDELLDSMKADGIDEDEETKEILVCT 493
VDE +D D + D+ET+ +L T
Sbjct: 454 LIVDERMDQ---DKVSMDDETRSLLRLT 478
>gi|242091818|ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
gi|241914622|gb|EER87766.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
Length = 536
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/522 (26%), Positives = 237/522 (45%), Gaps = 54/522 (10%)
Query: 24 TNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALE 83
T + + LY + G+ + E+D ++ + + E+ +R +R+ + AL+
Sbjct: 13 TKKYVEEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYRPALK 72
Query: 84 VSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVR 143
+S+ M R+G+ D A+ LDLI + G +AE YF +L + KT+ TYGALLN Y +
Sbjct: 73 LSEVMTRRGMNPTV-SDQAICLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCK 131
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
+ T+KA S KM E+ A + + +N +M +Y+K Q EKVP ++ MKA ++ P F+
Sbjct: 132 ELMTEKAESLMAKMSELNFAFTAMPFNSLMTMYTKVNQPEKVPGIIQYMKADDVLPHVFT 191
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
Y + + + A +D+ G+E ++ EM+ + DW+TY++ A Y+ A L +KA LK+
Sbjct: 192 YNVWMRALAALNDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVDAGLFEKAEAALKEL 251
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEH 323
E+R D Y FLI+LY N EV R+W K R N Y+ M++ L L +
Sbjct: 252 EKRNTSNDVEAYQFLITLYGRTQNLVEVHRVWRSLKRNNPRMANMSYLNMIQVLANLKDL 311
Query: 324 EEAEKVLKEWE------------------------------------------------- 334
AE KEWE
Sbjct: 312 PAAEACFKEWEARHIHPPKTKAKDSGADNISTTDPESSSNLPNNQSGIKETGDEAAKDLQ 371
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
L YD R+ NA+I Y G++ A A+ + G +W + + G +
Sbjct: 372 LKHPKYDIRVANAMIKAYIAEGMLDKAVAVKKRAKMHGGRLNAKTWEIFMEHHLKTGDLK 431
Query: 395 RGFQCMKAALSV-YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP-MNRQ 452
C A+ + G+ W P P V +++S + V E +V +L+ V +
Sbjct: 432 MAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAEQYVESLKKVQKDLGTP 491
Query: 453 MYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL--VC 492
++ ++ GK + +K + ++ EET ++L +C
Sbjct: 492 VFEPLLRTYAAAGKKFPGMRQRLKIENVEVGEETDQLLDSIC 533
>gi|413953409|gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 626
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 215/466 (46%), Gaps = 70/466 (15%)
Query: 82 LEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCY 141
L +S+ M R+G+ D A++LDLI + G +AE YF +L + KT+ TYGALLN Y
Sbjct: 161 LVLSEVMARRGMNPTV-SDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSY 219
Query: 142 VRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDN 201
++ T+KA S KMKE+ A + +++N +M +Y+K Q EKVP ++ +MKA ++ PD
Sbjct: 220 CKELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDV 279
Query: 202 FSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK 261
F+Y + + + A D+ G+E ++ EM+ + DW+TY++ A Y++A + +KA LK
Sbjct: 280 FTYNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALK 339
Query: 262 KAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLG 321
+ E+R D Y FLI+LY N EV R+W K R N Y+ M++ L L
Sbjct: 340 ELEKRNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLK 399
Query: 322 EHEEAEKVLKEWEL---------------------------------SGN---------- 338
+ AE KEWE SG
Sbjct: 400 DLSAAEACFKEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAED 459
Query: 339 ------SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
YD R+ NA+I Y G++ A A+ + +G +W + Y G
Sbjct: 460 LQPKHPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKTGD 519
Query: 393 TERGFQCMKAALSV-YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV----- 446
+ C A+ + G+ W P P V +++S + V E +V AL+ V
Sbjct: 520 LKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALKKVQKDLG 579
Query: 447 IPMNRQMYHAFIKA--------------NIRNGKGVDELLDSMKAD 478
P+ + + A N+ G+G +LLDS+ AD
Sbjct: 580 APVFEPLVRTYAAAGKKFPGMRQRLKIENVEVGEGTAQLLDSICAD 625
>gi|449438490|ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 334
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 180/300 (60%), Gaps = 6/300 (2%)
Query: 154 FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGA 213
+KM+E+G + L+YN ++ LY+ G++EK+ ++L EM+ I PD F+Y I +N+Y A
Sbjct: 1 MQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAA 60
Query: 214 RSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL-EQKDG 272
SD+ ME +L +ME+ P + DW TY + Y KA L + + +LKKAE+ + +++
Sbjct: 61 ASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKKAEQFIGDKQKW 120
Query: 273 IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
+ Y +L++LYA++GNK EV R+W+L KR+ N Y+ ++ +LMKL + + AE++LKE
Sbjct: 121 LAYQYLMTLYAAIGNKDEVYRVWNLYTNLQKRF-NSGYLCIISSLMKLDDIDGAERILKE 179
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
WE S+D RIPN +I YC G V AEA + L+E GK N+W ++A+GY G
Sbjct: 180 WESGDTSFDFRIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEANTWDLLASGYHSNGL 239
Query: 393 TERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMN 450
T + + +K A+S V WKP ++ + L L +V E + L R + P+N
Sbjct: 240 TNKVAETLKKAIS--VSPPHWKPKYHILAACLEYLKTNENVDLAEEIIGLLCKRDIFPLN 297
>gi|297808773|ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318107|gb|EFH48529.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 239/461 (51%), Gaps = 6/461 (1%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDW 87
++ +L I+ G P + L + +G+ V + EL+ I + L + R+ AL++ +W
Sbjct: 34 HRNSLKEILRKNG-PRRSVTSLLQERIDSGHAVALSELRFISKRLIRSNRYDLALQMIEW 92
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT----YGALLNCYVR 143
M + F+ D +++L+LI + HG AE YF L + + + Y LL YV+
Sbjct: 93 MENQKEIQFSVYDISLRLELIIKTHGLKQAEEYFEKLLNSSASLRVAKSAYLPLLRSYVK 152
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
++ + K+ +G ++ +N++M LY +GQYEKV V++ MK I + S
Sbjct: 153 KKMVKEGEVFMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKVNKIPRNVLS 212
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
Y + +N+ S + +E + REM + + WS+ + A+ YIK +KA VL+ A
Sbjct: 213 YNLWMNACCQVSGVTAVETVYREMVGDKSVEVGWSSLCTLANVYIKGGFDEKAKLVLENA 272
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEH 323
E+ L + + +GY FLI+LYASLG+K V+RLW+ K C R +YI +L +L+K+G+
Sbjct: 273 EKLLNRSNRLGYFFLITLYASLGDKEGVVRLWEASKLVCGRISCANYICVLSSLVKIGDL 332
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
EEAE+V EWE +YD R+ N ++ Y NG ++ AE++ ++E+G +W ++
Sbjct: 333 EEAERVFNEWEAQCFNYDVRVSNVLLGAYMRNGEIRKAESLHARVLERGGNPNYKTWEIL 392
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
G+ E+ M A + ++G W+P ++ +I +E +++ ++ L
Sbjct: 393 MEGWVKCQSMEKAIVAMHRAFEL-MKGCHWRPSESIVMAIAKYFEEEEKIEEANTYIRDL 451
Query: 444 RTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDE 484
+ + +Y ++ + ++ + MK D I DE
Sbjct: 452 HHLGLASLPLYRLLLRMQEHAQRPAFDIYEMMKLDKIGIDE 492
>gi|449470082|ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 188/329 (57%)
Query: 59 KVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAE 118
+ + +L+R+++ K KRF +ALE M + P +HA++L+L + HG L AE
Sbjct: 89 RTSITKLRRVVKKFCKSKRFERALEALILMETRDNFRMYPAEHALRLELTIKAHGLLKAE 148
Query: 119 SYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
YF+ L + LL+ YV++R T+KA + K+++ G+ ++ YN++M LY
Sbjct: 149 EYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVA 208
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
T Q EKVP V+ +MK I + SY + +N+ + +E++ EM + ++ + WS
Sbjct: 209 TYQNEKVPLVIKDMKQNQIPRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGWS 268
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
T + A+ YI+ L++KA LK+AE++L +GY FLI+LYASL +K V R+W
Sbjct: 269 TMCTLANVYIQEGLVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRAS 328
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
K +YI +L L+KLGE ++AEKV KEWEL+ +YD R+ N ++ Y NGL+
Sbjct: 329 KAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLL 388
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGY 387
+ AE++ + +G +W ++ G+
Sbjct: 389 EKAESLHRHTLGRGGNPNYKTWEILMEGW 417
>gi|449515498|ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 191/330 (57%), Gaps = 2/330 (0%)
Query: 59 KVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAE 118
+ + +L+R+++ K KR+ +ALE M + P +HA++L+L + HG L AE
Sbjct: 89 RTSITKLRRVVKKFCKSKRYERALEALILMETRDNFRMYPAEHALRLELTIKAHGLLKAE 148
Query: 119 SYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
YF+ L + LL+ YV++R T+KA + K+++ G+ ++ YN++M LY
Sbjct: 149 EYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVA 208
Query: 179 TGQYEKVPDVLTEMKAKNIFPDN-FSYRICINSYGARSDLEGMEIILREMESQPHIVLDW 237
T Q EKVP V+ +MK +N+ P N SY + +N+ + +E++ EM + ++ + W
Sbjct: 209 TYQNEKVPLVIKDMK-QNLIPRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGW 267
Query: 238 STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
ST + A+ YI+ L++KA LK+AE++L +GY FLI+LYASL +K V R+W
Sbjct: 268 STMCTLANVYIQEGLVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRA 327
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
K +YI +L L+KLGE ++AEKV KEWEL+ +YD R+ N ++ Y NGL
Sbjct: 328 SKAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGL 387
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
++ AE++ + +G +W ++ G+
Sbjct: 388 LEKAESLHRHTLGRGGNPNYKTWEILMEGW 417
>gi|357163843|ref|XP_003579864.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Brachypodium distachyon]
Length = 422
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 180/324 (55%), Gaps = 1/324 (0%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
LD W G EL+R+ RDL + +R+ ALEV++WM + D+ V++DLI
Sbjct: 88 LDRWAGEGRAAPAPELRRVARDLSRARRYKHALEVAEWMKTHHESDLSENDYGVRIDLIT 147
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+V G +AE +F L + K+ + Y ALL+ Y R + TDKA F +MK+ +++ L Y
Sbjct: 148 KVFGANAAEDFFEKLPSEAKSLEAYTALLHSYARSKMTDKAERLFERMKDADLSIDVLVY 207
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N++M LY G+ +KVP V E+K +N+ PD F+Y + I++ A DLE + IL EM
Sbjct: 208 NEMMTLYISVGELDKVPAVAEELKRQNVSPDLFTYNLRISASAASMDLEIFKGILDEMSK 267
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
P+ W+ Y + A Y+ A+ + + + L +AE ++ Q++ I Y+FLI L+ LGN
Sbjct: 268 DPNSNEGWTLYRNLATIYVNASQLVSSGNSLVEAEAKISQREWITYDFLILLHTGLGNLE 327
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS-GNSYDTRIPNAV 348
V +W + +R +R+YI +L + + G+ ++A++++ +W+ S +D N +
Sbjct: 328 RVKDIWKSMQMTSQRMTSRNYICVLSSYLMCGQLKDAKEIVDQWQRSKAPEFDISACNRL 387
Query: 349 IIGYCNNGLVQNAEAILEDLVEKG 372
G A++ E +++K
Sbjct: 388 FDALLGAGFTDTADSFRELMLQKS 411
>gi|242073288|ref|XP_002446580.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
gi|241937763|gb|EES10908.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
Length = 415
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 189/352 (53%), Gaps = 1/352 (0%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
L S I LG LD W G EL+RI RDL + +R+ ALEV+DWM
Sbjct: 63 LRSRIFRLGLAKRSATAALDKWSGEGRAAPAAELRRIARDLSRVRRYKHALEVADWMKTH 122
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
+ D+ +++DLI +V G +AE +F L K+ + Y ALL+ Y R + TDKA
Sbjct: 123 HESDLSESDYGMRIDLITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYGRSKMTDKAE 182
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
F +MK+ +++ L YN++M LY G+ +KV + E+K +N+ PD F+Y + +++
Sbjct: 183 RLFERMKDANLSMDALVYNEMMTLYISVGELDKVEIIAEELKRQNVSPDLFTYNLRVSAA 242
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
A DLEG + IL EM P+ W+ Y + A Y+ A+ + + + L +AE ++ Q++
Sbjct: 243 AASMDLEGFKGILDEMSKDPNSKEGWTLYRNLASVYVDASQLVGSGNSLVEAEAKISQRE 302
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
I Y+FL+ L+A LGN+ + +W +R +R+YI ++ + + G+ ++A +++
Sbjct: 303 WITYDFLVILHAGLGNQERIKDIWKSMVMTSQRMTSRNYICVISSYLMCGQLKDAGEIVD 362
Query: 332 EWELS-GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
+W+ S +D N ++ + GL A+ E +++K T + V
Sbjct: 363 QWQRSKAPEFDISACNRLLDALLSAGLTDTADRFRELMLQKSCILTSRATVV 414
>gi|449438238|ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
gi|449478839|ref|XP_004155431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
Length = 406
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 189/325 (58%), Gaps = 2/325 (0%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L+ W GN+V + EL+ I ++LRK +R+ ALE+ +WM + D A+++DL+
Sbjct: 76 LERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMVSHNQSELSDSDFAIRIDLMT 135
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+V G +AE YF L D KT +TY ALL+ + + TDKA + + KMKE I L+ L +
Sbjct: 136 KVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAETLYEKMKESDIPLTALPF 195
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N++M LY+ GQ EKV ++ ++K + + PD F+Y + I+S A +++G++ IL EM
Sbjct: 196 NEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVKQILNEMNH 255
Query: 230 QPHIVLDWSTYASAAHFYIK-ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
P+ +W Y + Y+K ANL+ S+ + ++ + Q++ I Y+ LI LYA LGNK
Sbjct: 256 NPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSGISQREWITYDLLIILYAGLGNK 315
Query: 289 SEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS-YDTRIPNA 347
++ ++W + ++ +R+YI ++ + L + +E +V+ +W+ S + +D N
Sbjct: 316 DKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVIDQWKQSTTTDFDISSCNR 375
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKG 372
++ + GL + A + + L++K
Sbjct: 376 LVNAFIEAGLHEKANSFVNVLIQKN 400
>gi|359484901|ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial [Vitis vinifera]
Length = 396
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 194/350 (55%), Gaps = 2/350 (0%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
L S I L P + L W+ GN+V + EL+ I ++LR+ +R+ ALE+S+WM
Sbjct: 46 LKSRIFKLRLPKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMVSH 105
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
+ D+AV++DL+ RV G +AE YF L KT +TY ALL+ Y + +KA
Sbjct: 106 DEFELSDSDNAVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAE 165
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
+ ++KE + L+ L YN++M LY GQ EKV V+ E+K + + PD F+Y + ++S
Sbjct: 166 ELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSC 225
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA-NLIDKASDVLKKAEERLEQK 270
A D++G+ IL+EM + W Y + A+ YI A +L++ AS+ + +A Q+
Sbjct: 226 AATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMAGHLVNSASNSVVEAGTNTTQR 285
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
D I Y+FLI LYA LGNK ++ ++W K ++ +R Y+ +L + + LG ++ V+
Sbjct: 286 DWITYDFLIILYAGLGNKDKIDQIWKSLKMTKQKIKSRSYVCILSSYVMLGHIKDVGIVI 345
Query: 331 KEWELSGNS-YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
EW+ S + +D + ++ + L++ AE + L+ K T S
Sbjct: 346 DEWKKSTTTDFDISVFYRLLDAFAELRLIEEAETFHKLLIRKSCLPTDES 395
>gi|125548508|gb|EAY94330.1| hypothetical protein OsI_16098 [Oryza sativa Indica Group]
Length = 430
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 176/323 (54%), Gaps = 1/323 (0%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L+ W G EL+ I RDL + R+ ALEV++WM + D+ +++DLI
Sbjct: 96 LERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMKTHHESDLSENDYGMRIDLIT 155
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
RV G +AE +F L ++ + Y ALL+ Y R + TDKA F++MK+ ++++ L Y
Sbjct: 156 RVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVY 215
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N++M LY G+ +KVP + E+K + PD F+Y + I++ A DLEG + IL EM
Sbjct: 216 NEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEMSK 275
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
P+ W Y + A Y+ A + + + L +AE ++ Q++ I Y+FL+ L+ LGN+
Sbjct: 276 DPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISQREWITYDFLVILHTGLGNRD 335
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS-GNSYDTRIPNAV 348
+ +W +R +R+YI +L + + G+ ++A +V+ +W+ S +D N +
Sbjct: 336 RIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISACNRL 395
Query: 349 IIGYCNNGLVQNAEAILEDLVEK 371
+ N G A + E +++K
Sbjct: 396 FDAFLNAGFTDTANSFRELMLQK 418
>gi|326504724|dbj|BAK06653.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523789|dbj|BAJ93065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 176/324 (54%), Gaps = 1/324 (0%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L+ W G EL+RI RDL + +R+ ALEV++WM + D+ V++DLI
Sbjct: 85 LEKWAGEGRAAPAPELRRIARDLSRARRYKHALEVAEWMKTHHESDLSENDYGVRIDLIT 144
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+V G +AE +F L K+ + Y ALL+ Y R + DKA F++MK+ + + L Y
Sbjct: 145 KVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLPIDVLVY 204
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N++M LY G+ +KVP + E+K +N+ PD F+Y + I++ A DLE + IL EM
Sbjct: 205 NEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGILDEMSK 264
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
P+ W Y + A Y+ A+ + + + L +AE ++ Q++ I Y+ L+ L+A LGN
Sbjct: 265 DPNSNEGWMLYRNLASIYVDASQLVSSGNSLVEAEAKISQREWITYDLLVILHAGLGNLD 324
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG-NSYDTRIPNAV 348
V +W + +R +R+Y+ +L A + G+ ++A +V+ +W+ S +D N +
Sbjct: 325 RVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAEVVDQWQRSKVPEFDVSACNRL 384
Query: 349 IIGYCNNGLVQNAEAILEDLVEKG 372
G A++ E +++K
Sbjct: 385 FDALLAAGFTDTADSFRELMLQKS 408
>gi|125590560|gb|EAZ30910.1| hypothetical protein OsJ_14991 [Oryza sativa Japonica Group]
Length = 471
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 176/323 (54%), Gaps = 1/323 (0%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L+ W G EL+ I RDL + R+ ALEV++WM + D+ +++DLI
Sbjct: 137 LERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMKTHHESDLSENDYGMRIDLIT 196
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
RV G +AE +F L ++ + Y ALL+ Y R + TDKA F++MK+ ++++ L Y
Sbjct: 197 RVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVY 256
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N++M LY G+ +KVP + E+K + PD F+Y + I++ A DLEG + IL EM
Sbjct: 257 NEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEMSK 316
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
P+ W Y + A Y+ A + + + L +AE ++ +++ I Y+FL+ L+ LGN+
Sbjct: 317 DPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRREWITYDFLVILHTGLGNRD 376
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS-GNSYDTRIPNAV 348
+ +W +R +R+YI +L + + G+ ++A +V+ +W+ S +D N +
Sbjct: 377 RIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISACNRL 436
Query: 349 IIGYCNNGLVQNAEAILEDLVEK 371
+ N G A + E +++K
Sbjct: 437 FDAFLNAGFTDTANSFRELMLQK 459
>gi|21740710|emb|CAD40831.1| OSJNBa0086B14.3 [Oryza sativa Japonica Group]
gi|116310079|emb|CAH67100.1| H0818E04.17 [Oryza sativa Indica Group]
Length = 430
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 176/323 (54%), Gaps = 1/323 (0%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L+ W G EL+ I RDL + R+ ALEV++WM + D+ +++DLI
Sbjct: 96 LERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMKTHHESDLSENDYGMRIDLIT 155
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
RV G +AE +F L ++ + Y ALL+ Y R + TDKA F++MK+ ++++ L Y
Sbjct: 156 RVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVY 215
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N++M LY G+ +KVP + E+K + PD F+Y + I++ A DLEG + IL EM
Sbjct: 216 NEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEMSK 275
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
P+ W Y + A Y+ A + + + L +AE ++ +++ I Y+FL+ L+ LGN+
Sbjct: 276 DPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRREWITYDFLVILHTGLGNRD 335
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS-GNSYDTRIPNAV 348
+ +W +R +R+YI +L + + G+ ++A +V+ +W+ S +D N +
Sbjct: 336 RIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISACNRL 395
Query: 349 IIGYCNNGLVQNAEAILEDLVEK 371
+ N G A + E +++K
Sbjct: 396 FDAFLNAGFTDTANSFRELMLQK 418
>gi|388490914|gb|AFK33523.1| unknown [Lotus japonicus]
Length = 358
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 170/282 (60%), Gaps = 1/282 (0%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L WV GN V V EL+ I ++LR+ +R+ ALE+S+WM + D+A+++DL+
Sbjct: 70 LHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRIDLMT 129
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+V G +AE YF L KT +TY ALL+ Y + T+KA ++++K+ ++ LTY
Sbjct: 130 KVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDALTY 189
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N++M LY GQ EKVP V+ E+K +N+ PD F+Y + I+S A +++ + IL EM
Sbjct: 190 NEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEMSH 249
Query: 230 QPHIVLDWSTYASAAHFYIKANLID-KASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
W+ Y + A+ Y+ A+ +D +S+ L + E+R+ Q I Y+FLI LYA LG+K
Sbjct: 250 GADSNESWTRYLNLANVYVTASRLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLGSK 309
Query: 289 SEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
++ ++W+ + ++ INR+Y ++ A + LG +E ++L
Sbjct: 310 DKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVVRLL 351
>gi|326520694|dbj|BAJ92710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 175/324 (54%), Gaps = 1/324 (0%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L+ W G EL+RI RDL + +R+ ALEV++WM + D+ V++DLI
Sbjct: 85 LEKWAGEGRAAPAPELRRIARDLSRARRYKHALEVAEWMKTHHESDLSENDYGVRIDLIT 144
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+V G +AE +F L K+ + Y ALL+ Y R + DKA F++MK+ + + L Y
Sbjct: 145 KVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLPIDVLVY 204
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N++M LY G+ +KVP + E+K +N+ PD F+Y + I++ A DLE + IL EM
Sbjct: 205 NEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGILDEMSK 264
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
P+ W Y + A Y+ A+ + + + L +AE ++ Q++ I Y+ L+ L+A LGN
Sbjct: 265 DPNSNEGWMLYRNLASIYVDASQLVSSGNSLVEAEAKISQREWITYDLLVILHAGLGNLD 324
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG-NSYDTRIPNAV 348
V +W + +R +R+Y+ +L A + G+ ++A V+ +W+ S +D N +
Sbjct: 325 RVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAGVVDQWQRSKVPEFDVSACNRL 384
Query: 349 IIGYCNNGLVQNAEAILEDLVEKG 372
G A++ E +++K
Sbjct: 385 FDALLAAGFTDTADSFRELMLQKS 408
>gi|255563224|ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538091|gb|EEF39702.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 426
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 184/325 (56%), Gaps = 2/325 (0%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+ NWV GN V EL+ I +LRK +R+ ALE+S+WM D+A ++DL+
Sbjct: 94 IHNWVSEGNTVTASELRNISNELRKLQRYKHALEISEWMVTNKEFELMDFDYATRIDLMT 153
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+V G +AE YF L KT +TY ALL+ Y +Q KA + ++K ++ + LTY
Sbjct: 154 KVFGIDAAERYFEGLPITVKTSETYTALLHSYAGVKQLGKAEELYERIKGSNLSFTALTY 213
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N++M LY GQ EKV V+ E+K + I PD F+Y + I+S A +++ + IL EM+
Sbjct: 214 NEMMTLYMSVGQVEKVSLVVEELKRQKIAPDIFTYNLWISSCAAILNIDQVTRILDEMKH 273
Query: 230 QPHIVLDWSTYASAAHFYIKA-NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
DW Y A+ Y+KA +L++ S + +AE+ + Q++ I Y+FLI LYA L +K
Sbjct: 274 DSGCNDDWLRYIDIANIYVKAGHLVNTESSAVVEAEKSITQREWITYDFLIILYAGLRDK 333
Query: 289 SEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS-YDTRIPNA 347
+V ++W + ++ NR+++ +L + M LG +EA +VL +W+ S + +D +
Sbjct: 334 DKVDQIWKSLRMTKQKMTNRNFVCILSSYMMLGHLKEAGEVLDQWKKSTTTDFDLSACSR 393
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKG 372
++ + +GL + A L+E+
Sbjct: 394 LLDAFSGSGLTEIANDFHMLLIERN 418
>gi|356525847|ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 395
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 190/342 (55%), Gaps = 2/342 (0%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
L S I L P L WV GN V + +L+ I ++LR+ +R+ ALE+S+WM
Sbjct: 47 LRSRIFRLRLPKRSATNVLQKWVLQGNPVTLSQLRDISKELRRSQRYKHALEISEWMVSH 106
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
+ D+A ++DL +V G +AE YF L KT +TY ALL+ Y + T KA
Sbjct: 107 EEYELSDSDYAARIDLTTKVFGIDAAERYFEGLPLATKTAETYTALLHSYAGAKLTKKAE 166
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
++++K+ ++ LTYN++M LY GQ+EKVP V+ E+K + + PD F+Y + I+
Sbjct: 167 ELYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFTYNLWISYC 226
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA-SDVLKKAEERLEQK 270
A +++ + IL EM W Y + A+ YI +D A S+ L + E+R+ Q+
Sbjct: 227 AAILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVGHLDNASSNTLVETEKRITQR 286
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
I Y+FLI LY LG+K ++ ++W+ + ++ I+R+YI ++ + + LG +E +V+
Sbjct: 287 QWITYDFLIILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIISSYLMLGHTKEVGEVI 346
Query: 331 KEWELSGNS-YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+W+ S + +D +++ + + GL + A + L+EK
Sbjct: 347 DQWKQSTTTDFDMLACKKIMVAFRDMGLAEIANNLNMILIEK 388
>gi|255581582|ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528792|gb|EEF30799.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 300
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 152/254 (59%), Gaps = 1/254 (0%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDW 87
N LY ISP+G+P I P LD W++ G V +LQ I++LR KR++ ALE+S W
Sbjct: 47 NLNQLYRRISPVGDPKVSIVPILDQWIEEGKSVNKDQLQVFIKELRYCKRYTHALEISMW 106
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQT 147
M+ K D A++LDL+ +V G AE YF N+ K + Y ALLNCY +
Sbjct: 107 MSDKRYFALTSRDVAIRLDLMSKVLGIEQAEKYFENVPQKLKVLEVYNALLNCYAYAKSV 166
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
DKA + + M+++G A TLTYN ++ L+ +TG ++K+ ++ EM+ I D F+ I
Sbjct: 167 DKAEAVMQNMRDLGFAGKTLTYNVMLNLHYQTGNFKKLEALMLEMEENGIAYDRFTLGIQ 226
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
+++Y A D++ ME I+ MES ++V DW YA A+ Y KA L+DKA ++LKK+E +
Sbjct: 227 LSAYAAICDIQRMEKIMSRMESDANVVTDWCNYAIVANGYRKAGLMDKALEMLKKSEGLI 286
Query: 268 E-QKDGIGYNFLIS 280
+K YNFL++
Sbjct: 287 TGKKRSSAYNFLLT 300
>gi|356554749|ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 399
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 195/342 (57%), Gaps = 2/342 (0%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
L S I L P L WV GN + + +L+ I ++LR+ +R+ ALE+S+WM
Sbjct: 51 LRSRIFRLRLPKRSATNVLQKWVLQGNPITLSQLRDISKELRRSQRYKHALEISEWMVSN 110
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
+ D+AV++DL+ +V G +AE YF L KT +TY ALL+ Y + T+KA
Sbjct: 111 EEYELSDSDYAVRIDLMTQVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLTEKAE 170
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
++++K+ ++ LTYN++M LY GQ+EKVP V+ E+K + + PD F+Y + I+S
Sbjct: 171 ELYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFTYNLWISSC 230
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK-ANLIDKASDVLKKAEERLEQK 270
A +++ + IL EM W Y + A+ YI A+L + +S+ L + E+R+ Q+
Sbjct: 231 AAILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVAHLDNASSNTLVETEKRITQR 290
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
I Y+FLI LY LG+K ++ ++W+ ++ I+R+Y+ ++ + + LG +E +V+
Sbjct: 291 QWITYDFLIILYGGLGSKDKLDQIWNSLGMTKQKMISRNYMCIISSYLMLGLTKEVGEVI 350
Query: 331 KEWELSGNS-YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+W+ S + +D +++ + + GL + A + L+EK
Sbjct: 351 DQWKQSTTTDFDMLACKKILVAFRDIGLAEIANNLNVILIEK 392
>gi|193806501|sp|Q9C7F1.2|PPR61_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g28020
Length = 566
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 177/324 (54%), Gaps = 2/324 (0%)
Query: 44 TRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAV 103
+I P L+ W + GN+V ++ II+ LR + QAL+VS+WM+++ IC P D A
Sbjct: 50 AQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAA 109
Query: 104 QLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQT-DKALSHFRKMKEMGI 162
+L LI V G AE +F ++ + + Y +LLN Y R +T KA + F+KM+++G+
Sbjct: 110 RLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGL 169
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
L + YN +M LYS EKV ++L EMK ++ DN + + Y A D+ ME
Sbjct: 170 LLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEK 229
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD-GIGYNFLISL 281
L + E I L+W T A Y++A KA +L+ E+ ++QK Y+ L+ L
Sbjct: 230 FLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKL 289
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
Y GN+ EVLR+W L K+ N Y T++ +L+K+ + AE++ K WE +D
Sbjct: 290 YGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFD 349
Query: 342 TRIPNAVIIGYCNNGLVQNAEAIL 365
RIP + GY + G+ + AE ++
Sbjct: 350 HRIPTMLASGYRDRGMTEKAEKLM 373
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 36/211 (17%)
Query: 46 IEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQL 105
+ P L+ W G++++ +L+ +I++LR K+FS+AL+VS+WM K +C D+A +L
Sbjct: 387 VTPLLEQW---GDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARL 443
Query: 106 DLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
L V G AE YF N+ ++ K Y Y ALL+ Y + +DK L +
Sbjct: 444 YLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAK---SDKNLGNM----------- 489
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
V ++L EM+ N+ PD + + Y A S ++ ME+ +R
Sbjct: 490 -------------------VDEILREMEENNVDPDLITVNHVLKVYAAESKIQAMEMFMR 530
Query: 226 EMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
++ I L+ T + A Y+KA L K+
Sbjct: 531 RWGTEDGIKLERGTMIAMAKAYVKAGLTKKS 561
>gi|15217811|ref|NP_174123.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322989|gb|AAG51479.1|AC069471_10 hypothetical protein [Arabidopsis thaliana]
gi|332192782|gb|AEE30903.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 177/325 (54%), Gaps = 2/325 (0%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA 102
+I P L+ W + GN+V ++ II+ LR + QAL+VS+WM+++ IC P D A
Sbjct: 49 NAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFA 108
Query: 103 VQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQT-DKALSHFRKMKEMG 161
+L LI V G AE +F ++ + + Y +LLN Y R +T KA + F+KM+++G
Sbjct: 109 ARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLG 168
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
+ L + YN +M LYS EKV ++L EMK ++ DN + + Y A D+ ME
Sbjct: 169 LLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEME 228
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD-GIGYNFLIS 280
L + E I L+W T A Y++A KA +L+ E+ ++QK Y+ L+
Sbjct: 229 KFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMK 288
Query: 281 LYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
LY GN+ EVLR+W L K+ N Y T++ +L+K+ + AE++ K WE +
Sbjct: 289 LYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEF 348
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAIL 365
D RIP + GY + G+ + AE ++
Sbjct: 349 DHRIPTMLASGYRDRGMTEKAEKLM 373
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 36/180 (20%)
Query: 46 IEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQL 105
+ P L+ W G++++ +L+ +I++LR K+FS+AL+VS+WM K +C D+A +L
Sbjct: 387 VTPLLEQW---GDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARL 443
Query: 106 DLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
L V G AE YF N+ ++ K Y Y ALL+ Y + +DK L +
Sbjct: 444 YLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAK---SDKNLGNM----------- 489
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
V ++L EM+ N+ PD + + Y A S ++ ME+ +R
Sbjct: 490 -------------------VDEILREMEENNVDPDLITVNHVLKVYAAESKIQAMEMFMR 530
>gi|297851240|ref|XP_002893501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339343|gb|EFH69760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 186/356 (52%), Gaps = 4/356 (1%)
Query: 14 HNAVFSRFY--YTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRD 71
N + R Y Y N I +TL I+ + +I P L+ W + GN+V ++ II+
Sbjct: 10 RNMLAKRLYGAYQNVITVSTLNHRITDALHRNAQIIPVLEQWRQQGNQVNPSHVRVIIKK 69
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY 131
LR + QAL+VS+WM+++ IC P D A +L LI V G AE +F ++ + +
Sbjct: 70 LRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARDD 129
Query: 132 QTYGALLNCYVRQRQT-DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
Y LLN Y R +T KA + F+KM+E+G+ YN +M LY EKV ++L
Sbjct: 130 SVYTTLLNWYARSDKTLCKAEATFQKMRELGLLSRPSPYNAMMSLYIALNDREKVEELLR 189
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
EMK ++ D+ + + Y A D+ ME L + E I L+W T A Y++A
Sbjct: 190 EMKDNDVEADSITVNNVLKLYSAVCDVTAMEKFLNKWEGINGIKLEWLTTLDMAKAYLRA 249
Query: 251 NLIDKASDVLKKAEERLEQKD-GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
KA +L+ EE ++K Y+ L+ LY GN+ EVLR+W+L K + N+
Sbjct: 250 RSNGKAIKMLRLTEELADRKSLKSAYDHLMKLYGEAGNREEVLRIWNLYKMNIGQRDNKG 309
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y T++ +L+K+ + AE++ K WE +D RIP + GY G+ + AE ++
Sbjct: 310 YRTVIRSLLKVDDIFGAEEIYKVWESLSLEFDIRIPTMLASGYRERGMTEKAEKLI 365
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 36/180 (20%)
Query: 46 IEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQL 105
+ P L+ W G++++ +L+ +I++LR +FS+AL+VS+WM K +C D+A +L
Sbjct: 379 VTPLLEQW---GDQMKPSDLKCLIKNLRDSNQFSKALQVSEWMGEKRVCDLYSEDYAARL 435
Query: 106 DLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
L V G AE YF N+ ++ K Y Y ALL+ Y + +DK L +
Sbjct: 436 YLTENVLGLEKAEKYFENIPENMKDYSVYVALLSSYAK---SDKNLENM----------- 481
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
V ++L EM+ N+ PD+ + + Y A S +E ME+ +R
Sbjct: 482 -------------------VEEILREMEENNVDPDSITVNYVLKVYAAASKVEAMEMFMR 522
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 94/216 (43%), Gaps = 54/216 (25%)
Query: 170 NDIMCLYSK---TGQYEK---VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII 223
+D+ CL + Q+ K V + + E + +++ ++++ R+ + ++ G+E
Sbjct: 393 SDLKCLIKNLRDSNQFSKALQVSEWMGEKRVCDLYSEDYAARLYLTE-----NVLGLEKA 447
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKA--NLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
+ E+ P + D+S Y + Y K+ NL + ++L++ EE D I N+++ +
Sbjct: 448 EKYFENIPENMKDYSVYVALLSSYAKSDKNLENMVEEILREMEENNVDPDSITVNYVLKV 507
Query: 282 YASLGNKSEVL----RLWDLEK----TACKRYINR------------------------- 308
YA+ +K E + R W +E CKR ++
Sbjct: 508 YAA-ASKVEAMEMFMRHWAVEMYGNVAGCKREVHNLWEECKNKKEEKVGDGKECLNVVST 566
Query: 309 -------DYITMLEALMKLGEHEEAEKVLKEWELSG 337
Y T++ +L+KL + + AEKV EW+ G
Sbjct: 567 LLKMDDDGYRTVISSLLKLDDVQGAEKVYGEWKPKG 602
>gi|224141193|ref|XP_002323959.1| predicted protein [Populus trichocarpa]
gi|222866961|gb|EEF04092.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 188/349 (53%), Gaps = 4/349 (1%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDW 87
N+ L I L P + +D WV+ GN V EL+ I ++LRK +RF ALE+S+W
Sbjct: 6 NEDDLKGRIFRLRLPKRSVTNVIDKWVREGNTVSSSELRHISKELRKSQRFKHALEISEW 65
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQT 147
M + DHA ++DL+ +V G +AE YF L KT +TY ALL+ Y +
Sbjct: 66 MVAHEEFELSDTDHASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAAAKLI 125
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
+KA ++++K + + L YN++M LY GQ EKV V+ E+K + + PD F+Y +
Sbjct: 126 EKAEEFYKRIKGSNLPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIFTYNLW 185
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI---DKASDVLKKAE 264
I+S A +++ + IL EM + DW Y + Y+ A + + ++ + +AE
Sbjct: 186 ISSCAAALNIDKVRRILDEMSQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAAVVEAE 245
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHE 324
+++ Q++ I Y+FL+ LYA LG K ++ ++W + ++ +R+++ +L + + LG +
Sbjct: 246 KKITQREWITYDFLVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLMLGHLK 305
Query: 325 EAEKVLKEWELSGNS-YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
E +++ +W+ S + +D N ++ GL + A L+E+
Sbjct: 306 EVGEIVDQWKQSTTTDFDISACNRLLDAISCLGLTEIANNFHMLLIERN 354
>gi|21592522|gb|AAM64472.1| unknown [Arabidopsis thaliana]
Length = 409
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 180/326 (55%), Gaps = 7/326 (2%)
Query: 29 KTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM 88
K L S I L P L+ W+ GN++ + EL+ I ++LR+ +R+ ALEV++WM
Sbjct: 54 KDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWM 113
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
+ + D+A ++DLI +V G +AE YF L D KT +TY +LL+ Y +QT+
Sbjct: 114 VQHEESKISDADYASRIDLISKVFGIDAAERYFEGLHIDSKTAETYTSLLHAYAASKQTE 173
Query: 149 KALSHFRKMKEM-GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
+A + F+++ E + +TYN++M LY GQ EKVP+V+ +K K + PD F+Y +
Sbjct: 174 RAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLW 233
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK-KAEER 266
++S A +++ + IL EM W Y YI ++ + A L +AE+
Sbjct: 234 LSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKS 293
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+ Q++ I Y+FL+ L+ LGNK + ++W + + +R YI +L + + LG EA
Sbjct: 294 ISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREA 353
Query: 327 EKVLKEWELSGNS-YDT----RIPNA 347
E+++ +W+ S + +D RI NA
Sbjct: 354 EEIIHQWKESKTTEFDASACLRILNA 379
>gi|115436130|ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|57899055|dbj|BAD87829.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532354|dbj|BAF04737.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|222618277|gb|EEE54409.1| hypothetical protein OsJ_01440 [Oryza sativa Japonica Group]
Length = 484
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 185/330 (56%), Gaps = 9/330 (2%)
Query: 50 LDNWVKNGNK--VRVGELQRIIRDLRKRKRFSQALEVSDWM-NRKGICVFAPCDHAVQLD 106
LD WV+ G + + +L + RDL K KR + ALE+ DWM N KG+ + +A+ L+
Sbjct: 66 LDEWVREGREEAIAAADLAKCARDLHKVKRDAHALELMDWMVNTKGMSM-TYARYALHLE 124
Query: 107 LIGRVHGFLSAESYFSNLKD--DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIAL 164
L+ V+G +AE YFS + ++ ++TYGALLNCY + +KA + +R+M E+GI
Sbjct: 125 LLYSVYGIEAAEEYFSGIPSFTRDQNHRTYGALLNCYCSAKMEEKATNIYRRMDELGIPS 184
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIIL 224
ST N++M LY + GQ+ KV ++ EMK +N+ PD + I + S+ A + ++ ++
Sbjct: 185 STKLMNNLMGLYLELGQHSKVANLFDEMKERNVQPDELTCCILMRSHAAHNKIDTVKETF 244
Query: 225 REMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG-IGYNFLISLYA 283
M S + WS + + Y+ A ++++A +A+E L G + FL+ +A
Sbjct: 245 YNM-SLLDVPKQWSIFRTLGSIYMNAGMVEEAELAFMRAQEFLGFDHGRHPFYFLMRQFA 303
Query: 284 SLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
S+GN V R+W D++ T N Y+ ML+ L KLG+ + +++ KEWE +YD
Sbjct: 304 SIGNLRGVNRVWKDIKMTFSYNRTNFSYLLMLQCLYKLGDTDRMKEIYKEWEYRYENYDP 363
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
R+ N + + NG+ AE + E + E+G
Sbjct: 364 RLTNMLTRAHLRNGMTNEAELLWEKVKERG 393
>gi|18415979|ref|NP_568214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75165070|sp|Q94B59.1|PP372_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g09450, mitochondrial; Flags: Precursor
gi|14596093|gb|AAK68774.1| putative protein [Arabidopsis thaliana]
gi|27311913|gb|AAO00922.1| putative protein [Arabidopsis thaliana]
gi|332004012|gb|AED91395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 180/326 (55%), Gaps = 7/326 (2%)
Query: 29 KTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM 88
K L S I L P L+ W+ GN++ + EL+ I ++LR+ +R+ ALEV++WM
Sbjct: 54 KDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWM 113
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
+ + D+A ++DLI +V G +AE YF L D KT +TY +LL+ Y +QT+
Sbjct: 114 VQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTE 173
Query: 149 KALSHFRKMKEM-GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
+A + F+++ E + +TYN++M LY GQ EKVP+V+ +K K + PD F+Y +
Sbjct: 174 RAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLW 233
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK-KAEER 266
++S A +++ + IL EM W Y YI ++ + A L +AE+
Sbjct: 234 LSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKS 293
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+ Q++ I Y+FL+ L+ LGNK + ++W + + +R YI +L + + LG EA
Sbjct: 294 ISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREA 353
Query: 327 EKVLKEWELSGNS-YDT----RIPNA 347
E+++ +W+ S + +D RI NA
Sbjct: 354 EEIIHQWKESKTTEFDASACLRILNA 379
>gi|297806979|ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
gi|297317210|gb|EFH47632.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
Length = 410
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 181/326 (55%), Gaps = 7/326 (2%)
Query: 29 KTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM 88
K L S I L P L+ WV GN++ + EL+ I ++LR+ +R ALEV++WM
Sbjct: 55 KDDLKSRIFRLRLPKRSATTVLERWVGEGNQITINELREISKELRRTRRHKHALEVTEWM 114
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
+ + D+A ++DLI +V G +AE YF L D KT +TY +LL+ Y +QT+
Sbjct: 115 VQHEELKVSDADYASRIDLISKVFGIDAAERYFEGLHIDAKTTETYTSLLHAYAGSKQTE 174
Query: 149 KALSHFRKMKEM-GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
+A + F+++ E ++ +TYN++M LY GQ EKVP+V+ +K K + PD F+Y +
Sbjct: 175 RAEALFKRIIETDSLSFGAITYNEMMTLYMSVGQVEKVPEVIQVLKHKKVSPDIFTYNLW 234
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA-SDVLKKAEER 266
++S A +++ + IL EM W Y + YI ++ + A S +AE+
Sbjct: 235 LSSCAATFNIDELRRILEEMRHDASSNEGWVRYINLTSIYINSSRVTNAESTSPVEAEKS 294
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+ Q++ I Y+FL+ L+ LGNK + ++W ++ +R YI +L + + LG EA
Sbjct: 295 ISQREWITYDFLMILHTGLGNKVMIDQIWKSLGNTNQKLSSRSYICVLSSYLMLGHLREA 354
Query: 327 EKVLKEWELSGNS-YDT----RIPNA 347
E+++ +W+ S + +D RI NA
Sbjct: 355 EEIIHQWKESKTTEFDASACLRILNA 380
>gi|168063926|ref|XP_001783918.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664548|gb|EDQ51263.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 224/452 (49%), Gaps = 7/452 (1%)
Query: 42 PGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH 101
P + P + W+ G + L I+ LR+R+R+ QA+E+SDWM+ + + D+
Sbjct: 1 PQKSVVPLIKEWLNEGYALDKRVLVSILIRLRRRQRYKQAMEISDWMSEEKNIKWEMADN 60
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
V++DL ++ F AE + + KT Y LL Y + KA + K+K G
Sbjct: 61 IVRIDLKAKMKQFAVAEQLLEDSPPEFKTELAYHTLLRNYADYQMAQKADALLEKLKGTG 120
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
I +N +M LY + G KV ++L +MK + D ++Y I ++ D+EGME
Sbjct: 121 ILTLPFAFNQMMLLYKRKGMMNKVTEILADMKTHGVPKDVYTYNILMDVKARSGDIEGME 180
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
I E+ + ++ D +T+ + A F + A L+DKA LK+ EE ++ Y+ LIS
Sbjct: 181 KIFEELSADENVKADAATFGTLATFCVHAGLLDKARSYLKEMEEGDVFRNRSAYDILISQ 240
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
Y ++G++ V R+W+ K+ NR YIT++EA KLG E+AE++ S
Sbjct: 241 YGAVGDQEGVERVWEKVKSGP-VVSNRSYITVIEAFGKLGMVEKAEELYGIMSKSKGLIL 299
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+R N+++ Y GL++ AE ++ED+V+ G+ ++ + GY + ++ MK
Sbjct: 300 SRQFNSLLSAYARQGLMEKAEKLVEDMVKLGRKKNAVTYHHLVTGYLKTDQLDKALAVMK 359
Query: 402 AALSVYVEGKG--WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM-NRQMYHAFI 458
A +G+ W + + S+L + G V E ++ P N Q+Y+ +
Sbjct: 360 EAQGDSKQGRSRLW---VETLISVLDAYAERGDVISAEKQFQDIKKAYPRPNIQVYNILL 416
Query: 459 KANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
KA I++ L M AD + +EET +L
Sbjct: 417 KAYIKSRVPALGFLQRMLADKLVPNEETLNLL 448
>gi|218188053|gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indica Group]
Length = 484
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 184/330 (55%), Gaps = 9/330 (2%)
Query: 50 LDNWVKNGNK--VRVGELQRIIRDLRKRKRFSQALEVSDWM-NRKGICVFAPCDHAVQLD 106
LD WV+ G + + +L + RDL K KR + ALE+ DWM N KG+ + +A+ L+
Sbjct: 66 LDEWVREGREEAIAAADLAKCARDLHKVKRDAHALELMDWMVNTKGMSM-TYARYALHLE 124
Query: 107 LIGRVHGFLSAESYFSNLKD--DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIAL 164
L+ V+G +AE YFS + ++ ++TYGALLNCY + +KA + +R+M E+GI
Sbjct: 125 LLYSVYGIEAAEEYFSGIPSFTRDQNHRTYGALLNCYCSAKMEEKATNIYRRMDELGIPS 184
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIIL 224
ST N++M LY + GQ+ K ++ EMK +N+ PD + I + S+ A + ++ ++
Sbjct: 185 STKLMNNLMGLYLELGQHSKAANLFDEMKERNVQPDELTCCILMRSHAAHNKIDTVKETF 244
Query: 225 REMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG-IGYNFLISLYA 283
M S + WS + + Y+ A ++++A +A+E L G + FL+ +A
Sbjct: 245 YNM-SLLDVPKQWSIFRTLGSIYMNAGMVEEAELAFMRAQEFLGFDHGRHPFYFLMRQFA 303
Query: 284 SLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
S+G+ V R+W D++ T N Y+ ML+ L KLG+ + +++ KEWE +YD
Sbjct: 304 SIGSLRGVNRVWKDIKMTFSYNRTNFSYLLMLQCLYKLGDTDRMKEIYKEWEYRYENYDP 363
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
R+ N + + NG+ AE + E + E+G
Sbjct: 364 RLTNMLTRAHLRNGMTNEAELLWEKVKERG 393
>gi|449457725|ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 227
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 130/211 (61%), Gaps = 2/211 (0%)
Query: 18 FSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKR 77
F FY T + K LY ISP+G+P + P LD WV G V+ EL+ II++LR KR
Sbjct: 19 FVNFYST--VVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKR 76
Query: 78 FSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGAL 137
F ALE+S WM+ K + D A++++LI RVHG E YF N+ K YQ + AL
Sbjct: 77 FKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIAL 136
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI 197
LNCY ++ DKA + +K+KEMG A S L YN +M LY + G++E++ +L EMK + +
Sbjct: 137 LNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGV 196
Query: 198 FPDNFSYRICINSYGARSDLEGMEIILREME 228
+ D F+Y I I++Y A SD G+E I+ +ME
Sbjct: 197 YYDRFTYSIRISAYAAASDFRGIEKIMEQME 227
>gi|414586983|tpg|DAA37554.1| TPA: hypothetical protein ZEAMMB73_139718 [Zea mays]
Length = 423
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 174/352 (49%), Gaps = 12/352 (3%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
L S I LG L+ W G EL+RI RDL + +R+ ALEV+DWM
Sbjct: 56 LRSRIFRLGLAKRSATAALEKWSSEGRDAPTAELRRIARDLTRVRRYKHALEVADWMKTH 115
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
+ D+ +++DLI +V G +AE +F L K+ + Y ALL+ Y R + TD+A
Sbjct: 116 HESDLSENDYGMRIDLITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYGRSKMTDRAE 175
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
F +MK+ + + L YN++M LY G+ KV V E+K +N+ PD F+Y + ++
Sbjct: 176 RLFERMKDASLPMDALVYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLFTYNLRASAA 235
Query: 212 GARSDLEGMEIILREMESQPHIVLD--WSTYASAAHFYIKAN--LIDKASDVLKKAEERL 267
A DLEG +L EM P + W+ Y A Y+ A L S ++ E R+
Sbjct: 236 AASMDLEGFRAVLDEMSRDPKSSTEGGWALYRDLASVYVDAGQLLGSVNSPPVEAGEARI 295
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLW-------DLEKTACKRYINRDYITMLEALMKL 320
Q++ I Y+FL+ L+A LG + +W + +R +R+Y+ ++ + +
Sbjct: 296 SQREWITYDFLVILHAGLGRPERIRDIWRSMVATSQSQSQQQQRMTSRNYVCVVSSYLAC 355
Query: 321 GEHEEAEKVLKEWELS-GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
G E+A +V+ +W+ S +D N ++ GL A E +++K
Sbjct: 356 GRLEDAGEVVDQWQRSKAPEFDVSACNRLLDALLRAGLADAAGRFRELMLQK 407
>gi|168006155|ref|XP_001755775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693094|gb|EDQ79448.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 208/411 (50%), Gaps = 5/411 (1%)
Query: 82 LEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCY 141
+E+SDWM + + D+ V++DL ++ F AE N + KT Y LL Y
Sbjct: 1 MEISDWMALEKGTKWELADNIVRIDLKSKMKQFTVAEQLLENSPPEFKTELAYHTLLKNY 60
Query: 142 VRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDN 201
V + KA + K+K G+ ++N +M LY + G K+P++L +MKA + D
Sbjct: 61 VDHQMAQKAGALLEKLKSTGLLTLPFSFNQMMLLYKRKGMENKLPEILEDMKAHGVPKDV 120
Query: 202 FSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK 261
++Y I ++ D+EGME I E+++ ++ D +T+ + A + A L++KA LK
Sbjct: 121 YTYNILMDVKSRSGDIEGMEKIFEELKADENVKADAATFGTLATACVHAGLLEKAKVYLK 180
Query: 262 KAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI-NRDYITMLEALMKL 320
+ EE ++ Y+ LIS Y ++G+ V R+W EK + NR YIT++EA KL
Sbjct: 181 EMEEGDIFRNRSAYDILISQYGAVGDVDGVERVW--EKVKSGPIVSNRSYITVIEAFGKL 238
Query: 321 GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
G E+AE++ + S +R N+++ Y GL+ AE +++D+ + G+ ++
Sbjct: 239 GMVEKAEELYEVMSQSKGLILSRQFNSLLSAYTRQGLMDKAEKLMDDMEKLGRKKNAITY 298
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
+ GY + ++ MK AL +G+ KP + + ++L + G+V + E
Sbjct: 299 HHLVTGYLKTDQLDKAVAAMKEALVDPKQGRS-KPWFETLVAVLDAFAERGNVVNAEQQF 357
Query: 441 AALRTVIP-MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
++ P +N Q+Y+ +KA I + L M D + ++ET +L
Sbjct: 358 QEIKKAYPRLNIQVYNILLKAYINSRVPALGFLHRMSTDKLVPNDETLSLL 408
>gi|9955532|emb|CAC05471.1| putative protein [Arabidopsis thaliana]
Length = 402
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 175/326 (53%), Gaps = 14/326 (4%)
Query: 29 KTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM 88
K L S I L P L+ W+ GN++ + EL+ I ++LR+ +R+ ALE +
Sbjct: 54 KDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEHEE-- 111
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
+ D+A ++DLI +V G +AE YF L D KT +TY +LL+ Y +QT+
Sbjct: 112 -----SKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTE 166
Query: 149 KALSHFRKMKEM-GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
+A + F+++ E + +TYN++M LY GQ EKVP+V+ +K K + PD F+Y +
Sbjct: 167 RAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLW 226
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK-KAEER 266
++S A +++ + IL EM W Y YI ++ + A L +AE+
Sbjct: 227 LSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKS 286
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+ Q++ I Y+FL+ L+ LGNK + ++W + + +R YI +L + + LG EA
Sbjct: 287 ISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREA 346
Query: 327 EKVLKEWELSGNS-YDT----RIPNA 347
E+++ +W+ S + +D RI NA
Sbjct: 347 EEIIHQWKESKTTEFDASACLRILNA 372
>gi|226528511|ref|NP_001143788.1| uncharacterized protein LOC100276555 [Zea mays]
gi|195627038|gb|ACG35349.1| hypothetical protein [Zea mays]
Length = 422
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 176/360 (48%), Gaps = 12/360 (3%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
L S I LG L+ W G EL+RI RDL + +R+ ALEV+DWM
Sbjct: 56 LRSRIFRLGLAKRSATAALEKWSSEGRDAPAAELRRIARDLTRVRRYKHALEVADWMKTH 115
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
+ D+ +++DLI +V G +AE +F L K+ + Y ALL+ Y R + TD+A
Sbjct: 116 HESDLSENDYGMRIDLITKVFGASAAEDFFEKLPAGAKSLEAYTALLHSYGRSKMTDRAE 175
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
F +MK + + L YN++M LY G+ KV V E+K +N+ PD F+Y + ++
Sbjct: 176 RLFERMKGASLPMDALVYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLFTYNLRASAA 235
Query: 212 GARSDLEGMEIILREMESQPHIVLD--WSTYASAAHFYIKAN--LIDKASDVLKKAEERL 267
A DLEG +L EM + W+ Y A Y+ A L S ++ E R+
Sbjct: 236 AASMDLEGFRAVLDEMSRDLKSSTEGGWALYRDLASVYVDAGQLLGSVNSPPVEAGEARI 295
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLW-------DLEKTACKRYINRDYITMLEALMKL 320
Q++ I Y+FL+ L+A LG + +W + + +R +R+Y+ ++ + +
Sbjct: 296 SQREWITYDFLVILHAGLGRPERIRDIWRSMVATSQSQSQSQQRMTSRNYVCVVSSYLAC 355
Query: 321 GEHEEAEKVLKEWELS-GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
G E+A +V+ +W+ S +D N ++ GL A E +++K T +S
Sbjct: 356 GRLEDAGEVVDQWQRSKAPEFDVSACNRLLDALLRAGLADAAGRFRELMLQKRCILTSSS 415
>gi|224137686|ref|XP_002322619.1| predicted protein [Populus trichocarpa]
gi|222867249|gb|EEF04380.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 210/444 (47%), Gaps = 12/444 (2%)
Query: 39 LGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP 98
+ PG + LD WV G + E+ + +LRKR+ F +AL++S+W+ F
Sbjct: 13 ISAPGVSVHSVLDKWVAEGRDLDQLEISNAMFNLRKRRLFGRALQLSEWVEANKRKDFDE 72
Query: 99 CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
D+A +LDLI +V G AE Y + K Y LL V KA+ F KMK
Sbjct: 73 RDYASRLDLIAKVRGLQKAEVYIEKIPKSLKGEVIYRTLLANCVSANNAKKAVEVFNKMK 132
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
++ + ++ +YN ++ LY + + +K+ DVL M+ +N+ P F+Y + I++ G +D+
Sbjct: 133 DLELPITLFSYNQLLLLYKRHDK-KKIADVLLSMEKENVKPSLFTYILLIDTKGQSNDIA 191
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
GME I M+++ I D T A A Y+ L +KA VLK+ E ++ F+
Sbjct: 192 GMEQIAETMKAE-GIEPDIKTQAIMARHYVSGGLKEKAEIVLKEMEGGNLEEHRWACQFM 250
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDY-ITMLEALMKLGEHEEAEKVLKEWELSG 337
+ LY +LG EV RLW CK+ D + +EA +L + EAE V + +
Sbjct: 251 LPLYGTLGKADEVSRLWKF----CKKSPRLDECMAAIEAWGQLKKIPEAEAVFELMSKTW 306
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
++ +A++ Y NN ++ + +++ + + G P +W + Y +AG+ E+
Sbjct: 307 KKLSSKHYSALLKVYANNKMLSKGKDLIKQMGDSGCRIGPLTWDALIKLYVEAGEVEKAD 366
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-QMYHA 456
+ A V+ KP I+ K +G + + E +R R + +
Sbjct: 367 SILNKA----VQQNQMKPMFSSYMIIMEKYAKKGDIHNAEKMFHRMRQAGYQARSKQFQT 422
Query: 457 FIKANIRNGKGVDELLDSMKADGI 480
I+A I + + +KADG+
Sbjct: 423 LIQAYINAKAPCYGMRERLKADGL 446
>gi|356565994|ref|XP_003551220.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Glycine max]
Length = 469
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 202/432 (46%), Gaps = 33/432 (7%)
Query: 61 RVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY 120
R E+ ++ L RK + AL++S+ M ++ + + DHA+ LDL+ + G +A++Y
Sbjct: 63 RKWEVNDTLKKLDDRKLYQLALKLSETMAKRNM-IKTVRDHAIHLDLLAKARGITAAKNY 121
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
F NL + K + +GA+LNCY ++ +KA KMKE+ + LS++ YN ++ LY+K G
Sbjct: 122 FVNLPESAKNHLCHGAILNCYCKEPMIEKAEGFMEKMKELSLPLSSMPYNSLIMLYTKVG 181
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
Q EKV ++ EMK NI D+++Y + + + A +D+ +E + EM +
Sbjct: 182 QPEKVSSLIQEMKTSNIMLDSYTYNVWMRALAAVNDISSVERVHDEMMA----------- 230
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
L + E+R KD Y FLI+ Y N EV R+W +
Sbjct: 231 -------------------LTELEKRNAFKDLTAYQFLITFYGXTSNLYEVFRVWRSLRL 271
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
A + N Y+ M+ L+K + EK E E +YD R+ N +I Y +++
Sbjct: 272 AFPKTANISYLNMIRVLVKSKDLLGEEKCFXEXECGCPTYDIRVVNVLIRAYAKLDMLEK 331
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSV-YVEGKGWKPDPKV 419
AE + E +G + + Y G + C+ A+S+ G+ W P K+
Sbjct: 332 AEELKEHARRRGAKPNGKTLEIFMDYYLQKGNFKSTVDCLDEAISMGRWNGEKWVPXSKI 391
Query: 420 ITSILSKLGDEGSVQDVEAFVAALRTVIPM-NRQMYHAFIKANIRNGKGVDELLDSMKAD 478
I ++ E V E F+ L+ + +++ + + G+ +L +K +
Sbjct: 392 IDIMMRNFEQEKDVDGAEEFLEILKKSMESPGVEVFESLTRTYAATGRISSAMLRRLKME 451
Query: 479 GIDEDEETKEIL 490
+ E T+++L
Sbjct: 452 NVQVSEGTQKLL 463
>gi|297835552|ref|XP_002885658.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
gi|297331498|gb|EFH61917.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
Length = 737
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 180/353 (50%), Gaps = 12/353 (3%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKN---GNKVRVGELQRIIRDLRKRKRFSQALEVSDW 87
TL S I I L+ W + G ++ ++ ++ +LR +R +ALEVS+W
Sbjct: 23 TLQSRIEAALEKKAEITTVLEQWRQQQEQGKQLNPSLVRGVVENLRDSQRCREALEVSNW 82
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQT 147
M + IC P D + LI V G A ++ ++ ++ + Y +LL+ YVR+
Sbjct: 83 MIVQKICNLIPEDFTTRFHLIENVFGLEEAGNFVESIPENLRNESIYNSLLSSYVRRNDL 142
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKT--GQYEKVPDVLTEMKAKNIFPDNFSYR 205
DKA S F+KM+E+G+ L YN + LY + G KV ++L EMK NI D +
Sbjct: 143 DKAESTFKKMRELGLLLRASPYNSMTSLYRRIPHGNRCKVDEILREMKESNIKLDRDTVN 202
Query: 206 ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
+ Y + + ME L E E + LDW T A Y+++ KA ++L++ E
Sbjct: 203 NALRVYADVTHIATMEKFLAEWEG--NTPLDWLTRLDMAKAYLRSGFKGKAKEMLRRTE- 259
Query: 266 RLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEE 325
E +D Y L+ LY G + +V R+WDL K K+ N + ++ +L+KL +
Sbjct: 260 --ELRDPKSYEELMRLYGEAGGRKDVYRVWDLYKKLSKK-DNEGFRALIGSLLKLDDING 316
Query: 326 AEKV-LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
AE+ KEWE SG +D RIP ++ Y G+V+ A+ +++++++ ++ P
Sbjct: 317 AEEFYYKEWECSGLPFDVRIPTMLVSSYREKGMVEKADKLIKEIMKNEESVKP 369
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 168/333 (50%), Gaps = 51/333 (15%)
Query: 46 IEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQL 105
I P L++ + GN V+ EL+ +I++L +F +ALE S WM+ K P D+A +L
Sbjct: 370 ITPLLESLERKGNVVKPSELRDLIKNLCDSNQFYKALEASKWMSTKTSFNLFPQDYAARL 429
Query: 106 DLIGRVHGFLSAESYFS-----NLKDDEKTYQTYGALLNCYVRQRQT-DKALSHFRKMKE 159
+I V GF AE +F N+KDD YG LL+CY + +T DKA + F KM +
Sbjct: 430 HMIENVLGFEEAEKFFERSIPENMKDD----YVYGTLLSCYAKSHKTLDKAEAIFEKMGD 485
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
+G +N ++ LYS+ G+ EKV +++++MK NI PD+ + + Y +D++
Sbjct: 486 LGFLSKPSPFNSMISLYSQLGKREKVENLISKMKCMNIEPDSLTMNNVLRMYADETDIKT 545
Query: 220 MEIILRE-MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
M+ RE + ++ + L+ T + A+ Y +A L+ KA ++ +
Sbjct: 546 MDKYKREWINAEKNTKLEMRTMVAMANAYERAGLLLKAIEITR----------------- 588
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRD---------------YITMLEALMKLGEH 323
+K+EV RLW+ K KR D Y +++ +L+KL +
Sbjct: 589 --------SKNEVHRLWNEYKEKEKRNYKIDDANLCKCRSAVGDEEYQSVISSLLKLDDL 640
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
+ AE++ EWE G ++TRIP +I YC G
Sbjct: 641 KGAEEIYGEWEPEGPEFNTRIPCLIISRYCKEG 673
>gi|307136025|gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 608
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 212/446 (47%), Gaps = 22/446 (4%)
Query: 42 PGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH 101
P + LD WV G+++ ++ + LRKR+ F +AL+ S+W+ G F D+
Sbjct: 152 PALSVTSALDKWVSEGHELSRDDISSTMFGLRKRRMFGKALQFSEWLEASGQLEFNEADY 211
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
A LDLI +V G AE+Y + + + + Y LL YV KA F +MK++
Sbjct: 212 ASHLDLIAKVQGLHKAETYIAKIPNSFRGEAVYRTLLANYVLANDVKKAEEVFNRMKDLE 271
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
++T Y+ ++ LY + + ++ D+L+ M+ +N+ P F+Y+I I++ G +D+ GME
Sbjct: 272 FPMTTFAYDQMLILYKRIDR-RRIADILSLMEKENVKPRPFTYKILIDAKGLSNDISGME 330
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
++ M+++ I LD T A Y+ L DKA +LK EE + +L+ L
Sbjct: 331 QVVDTMKAE-GIKLDVDTLLLLAKHYVLGGLKDKAMPILKATEEVNSKGSRWPCRYLLPL 389
Query: 282 YASLGNKSEVLRLWDLEKTACKRYIN-RDYITMLEALMKLGEHEEAEK----VLKEWE-L 335
Y L + EV RLW++ C+ N + + + A KL +EAEK V+K W+ L
Sbjct: 390 YGELQMEDEVRRLWEI----CEPNPNVEECMAAIVAWGKLKNIQEAEKIFDRVVKTWKRL 445
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
S Y T +I Y ++ ++ + ++ + + G P W V Y +AG+ E+
Sbjct: 446 STKHYST-----MIKVYGDSKMLTKGKELVNQMAKSGCRIDPMIWDAVVKLYVEAGEVEK 500
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMY 454
+ A+ Y G KP +++ +G V + E +R + P + +
Sbjct: 501 ADSFLFKAVKQY----GMKPLFDSYRTLMVHYARKGDVHNSEKIFHKIRQSGYPTHFGQF 556
Query: 455 HAFIKANIRNGKGVDELLDSMKADGI 480
++A + + + M AD +
Sbjct: 557 VTLVQAYLNAKTPAYGMRERMMADNV 582
>gi|125599572|gb|EAZ39148.1| hypothetical protein OsJ_23575 [Oryza sativa Japonica Group]
Length = 610
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 231/485 (47%), Gaps = 30/485 (6%)
Query: 2 IPKLKLSTNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVR 61
P + S +T++ N + ++ L+ I+ L P + LD W+++GN++
Sbjct: 128 FPAIDRSGDTKLQNKTY----------RSYLFQIV--LDAPSNSLRHVLDKWIEDGNQLE 175
Query: 62 VGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYF 121
+ ++ L+K+ + +AL+ +WM R + F D+A LDLI R HG +A+ Y
Sbjct: 176 RNDAMLVLFHLKKQHMYRKALQFVEWMERGKLLNFEKRDYACHLDLIARSHGIETAQKYI 235
Query: 122 SNLK---DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
+ +E Y+T ++NC V KA F+++K++ + L+ N ++ LY +
Sbjct: 236 KRVPLPFRNEVLYETL--IVNC-VLAGDIQKAEEVFKEIKDLCLRLTVTLCNQMILLYKR 292
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
KV VL M+ +N+ P F+YR+ I+ G +DL G+E++L EM++ I S
Sbjct: 293 IAP-GKVASVLMLMEKENVKPSAFTYRLLIDLKGRSNDLAGIEVVLNEMKAY-GIEPSTS 350
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQ-KDGIGY-NFLISLYASLGNKSEVLRLWD 296
T A FYI L +KA V+K+ E +L KDG L+ LYA+L ++V R+W+
Sbjct: 351 TQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIKSLLHLYAALNKPNDVARIWE 410
Query: 297 LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
+ C + D+++ ++A +LG E+AE+ + + ++ NA++ Y N
Sbjct: 411 M----CTEPMLEDFLSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNK 466
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
L+ + +E + G P +W + Y ++G+ E+ + L+V E KP
Sbjct: 467 LLSKGKQFVERMCRDGCPNGPLTWDALINLYVNSGEVEKADSFL---LNVAEENPDRKPL 523
Query: 417 PKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK-GVDELLDSM 475
++ G + + E L+ V R +++A + N K L+ M
Sbjct: 524 FTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGYAPRPLHYAVLLEAYVNAKVPAHGFLERM 583
Query: 476 KADGI 480
+ D +
Sbjct: 584 RGDNV 588
>gi|414877074|tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea mays]
Length = 613
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 129/474 (27%), Positives = 229/474 (48%), Gaps = 16/474 (3%)
Query: 23 YTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQAL 82
+ R +TL + L P ++ L+ W K+GN + GEL ++ +LRKRK + +AL
Sbjct: 139 HIKRTFGSTLLKTV--LEAPRHQVTSALEKWAKDGNALDRGELYYVLLNLRKRKWYHKAL 196
Query: 83 EVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYV 142
E+ +++ + D+A ++DL +V+G AE Y + ++ Y LL V
Sbjct: 197 ELVEYVQNSQLLELGERDYAARVDLTAKVYGLHKAEQYIEKIPASHRSEVVYRTLLANCV 256
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
+ K+ F +MK++G ++T + N ++ LY + + +K+ DVLT M+ +++ P F
Sbjct: 257 AEGNVKKSEQVFNRMKDLGFPVTTFSSNQLLLLYKRLDK-KKIADVLTMMEKEDVKPSIF 315
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
+Y++ +++ G D+E ME ++ M + I D + A+ A YI DKA +L+
Sbjct: 316 TYKVLVDAKGMVGDVEAMEKVVESM-VKDGIEPDLTFNATIARQYIFNGQRDKAETLLES 374
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY-ITMLEALMKLG 321
E QK+ FL+ LYA LGN V R+W + C+ D ++ ++A KLG
Sbjct: 375 MEGDDIQKNRAACKFLLPLYAFLGNGDAVERIWKV----CEDNTRIDECLSAIDAFGKLG 430
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG-KATTPNSW 380
E+AEKV ++ + + ++ A++ Y N L+ E + + + E+G K TP
Sbjct: 431 NVEKAEKVFEDMFVKWKNLSSKYYTALLKVYANQNLLDKGEELAKRMDEEGAKFGTPTLN 490
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
A+V Y DAG+ E+ + + LS+ KP ++L +G V + E
Sbjct: 491 ALVKL-YADAGEVEKA-ESLLHKLSL---KNNVKPSYSSYMTLLDSYSKKGDVHNSEKVF 545
Query: 441 AALRTVIPMNR-QMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCT 493
LR + R +MY + + + + MKAD I + ++ T
Sbjct: 546 NKLRQIGYTGRIRMYQFLLHSYLHAKAPAYGFKERMKADNIFPNSAVATLIAAT 599
>gi|148906608|gb|ABR16456.1| unknown [Picea sitchensis]
Length = 600
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 202/418 (48%), Gaps = 11/418 (2%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDW 87
N + LY + L + L+ W+ +GN + E+ LR R+ F + L+VSDW
Sbjct: 130 NASPLYQTV--LSCKFIDLPSSLEQWLADGNVLTRREVVITFVHLRNRRMFKRLLKVSDW 187
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQT 147
+ K D+A +LD+I ++ G E YF+++ D + + YG LL Y
Sbjct: 188 LEGKKPFKKTERDYASRLDVITKILGIFKGEKYFASIPSDMRGQRAYGTLLANYSSTCNV 247
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
+KA F+KMK G +L+ YN ++ LY + + +K+ DVL M+ + + P F+Y+I
Sbjct: 248 EKAEEIFKKMKAEGFSLTAFEYNQLLLLYKRLDK-KKIQDVLKMMEDEGVKPTIFTYKIL 306
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
I+ G D+ GME + M+S+ I +D T A YI+A L +KA VLK+ E
Sbjct: 307 IDVKGWMGDIGGMEQVAENMKSE-DIEMDSGTLELLARHYIRAGLAEKAEVVLKELENVS 365
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+ L+ LYA LG +EV R+W D E R +Y T + A KLG+ E+A
Sbjct: 366 LKDKRSRLKMLLPLYAELGKPTEVERIWKDFEAFPALRL--DEYATGVVAWGKLGQIEKA 423
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
E ++ SG + NA++ Y ++ L+ + +++ + + G P W +
Sbjct: 424 EITFEKLLNSGKKLSAKHYNALLNVYADHHLLLKGKELVKRMSDNGCTIEPPIWDALIRL 483
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
+ +AG+ E+ + A + K +P + +IL K + G V + E +R
Sbjct: 484 HVNAGELEKADSILFKACN----QKQLRPKYWTMVTILEKYAERGDVANAEKIFDRMR 537
>gi|125557709|gb|EAZ03245.1| hypothetical protein OsI_25393 [Oryza sativa Indica Group]
Length = 610
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 231/485 (47%), Gaps = 30/485 (6%)
Query: 2 IPKLKLSTNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVR 61
P + S +T++ N + ++ L+ I+ L P + LD W+++GN++
Sbjct: 128 FPAIDRSGDTKLQNKTY----------RSYLFQIV--LDAPSNSLRHVLDKWIEDGNQLE 175
Query: 62 VGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYF 121
+ ++ L+K+ + +AL+ +WM R + F D+A LDLI R HG +A+ Y
Sbjct: 176 RNDAMLVLFHLKKQHMYRKALQFVEWMERGKLLNFEKRDYACHLDLIARSHGIETAQKYI 235
Query: 122 SNLK---DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
+ +E Y+T ++NC V KA F+++K++ + L+ N ++ LY +
Sbjct: 236 KRVPLPFRNEVLYETL--IVNC-VLAGDIQKAEEVFKEIKDLCLRLTVTLCNQMILLYKR 292
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
KV VL M+ +N+ P F+YR+ I+ G +DL G+E+++ EM++ I S
Sbjct: 293 IAP-GKVASVLMLMEKENVKPSAFTYRLLIDLKGRSNDLAGIEVVINEMKAY-GIEPSTS 350
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQ-KDGIGY-NFLISLYASLGNKSEVLRLWD 296
T A FYI L +KA V+K+ E +L KDG L+ LYA+L ++V R+W+
Sbjct: 351 TQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIKSLLHLYAALNKPNDVARIWE 410
Query: 297 LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
+ C + D+++ ++A +LG E+AE+ + + ++ NA++ Y N
Sbjct: 411 M----CTEPMLEDFLSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNK 466
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
L+ + +E + G P +W + Y ++G+ E+ + L+V E KP
Sbjct: 467 LLSKGKQFVERMCRDGCPNGPLTWDALINLYVNSGEVEKADSFL---LNVAEENPDRKPL 523
Query: 417 PKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK-GVDELLDSM 475
++ G + + E L+ V R +++A + N K L+ M
Sbjct: 524 FTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGYAPRPLHYAVLLEAYVNAKVPAHGFLERM 583
Query: 476 KADGI 480
+ D +
Sbjct: 584 RGDNV 588
>gi|115458674|ref|NP_001052937.1| Os04g0450200 [Oryza sativa Japonica Group]
gi|113564508|dbj|BAF14851.1| Os04g0450200, partial [Oryza sativa Japonica Group]
Length = 292
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 153/274 (55%), Gaps = 1/274 (0%)
Query: 100 DHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
D+ +++DLI RV G +AE +F L ++ + Y ALL+ Y R + TDKA F++MK+
Sbjct: 8 DYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKD 67
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
++++ L YN++M LY G+ +KVP + E+K + PD F+Y + I++ A DLEG
Sbjct: 68 ANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEG 127
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+ IL EM P+ W Y + A Y+ A + + + L +AE ++ +++ I Y+FL+
Sbjct: 128 FKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRREWITYDFLV 187
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS-GN 338
L+ LGN+ + +W +R +R+YI +L + + G+ ++A +V+ +W+ S
Sbjct: 188 ILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAP 247
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+D N + + N G A + E +++K
Sbjct: 248 EFDISACNRLFDAFLNAGFTDTANSFRELMLQKS 281
>gi|413946863|gb|AFW79512.1| DNA-binding protein [Zea mays]
Length = 622
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 227/468 (48%), Gaps = 21/468 (4%)
Query: 23 YTNRINKTTLYSIISP-------LGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKR 75
+T R++ + L +S L P ++ L+ W K+GN GEL ++ +LRKR
Sbjct: 139 HTRRLSDSILLKTLSDSILLKTVLEAPRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKR 198
Query: 76 KRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYG 135
+S+ALE+ +W+ + + F D+A LDL +V+G AE + + Y
Sbjct: 199 HWYSKALELVEWVQKSQLFEFVERDYAAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYR 258
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
LL V K+ F +MK++G ++ ++N ++ LY + + +K+ DVL M+ +
Sbjct: 259 TLLANCVSASNIKKSEQVFNRMKDLGFPVTQFSFNQLLLLYKRLDR-KKIADVLAMMEKE 317
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
++ P F+Y+I +++ G+ D+E ME ++ ME + I D + A+ A YI +K
Sbjct: 318 DVKPSLFTYKILVDAKGSVGDIEAMEKVIESME-KDSIEPDLTFNATIARHYIFYGQREK 376
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-RDYITML 314
A +LK E QK+ L+ L+A LGN V R+W AC+ + ++ +
Sbjct: 377 AEALLKAMEGDDIQKNRAACKTLLPLHAFLGNSDAVERIW----KACEDNTRVAESVSAI 432
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE-KGK 373
EA KLG+ E+AEKV ++ + + ++ NA++ Y ++ L+ + + + + E + +
Sbjct: 433 EAFGKLGDVEKAEKVFEDMLVHWKTLSSKFYNALLKVYADHNLLDKGKELAKRMDENRVR 492
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
P A+V Y +AG+ E+ + + LS+ KP ++L +G V
Sbjct: 493 FGAPTLDALVKL-YVEAGEVEKA-ESLVHKLSI---QNHIKPIYNTYMTLLDSYSKKGDV 547
Query: 434 QDVEAFVAALRTVIPMNR-QMYHAFIKANIRNGKGVDELLDSMKADGI 480
++ E LR R +MY + A +R + MKAD I
Sbjct: 548 RNSEKVFNKLRQSGYTGRIRMYQVLLHAYVRAKAPAYGFRERMKADNI 595
>gi|298572004|gb|ADI87999.1| PPR protein [Silene latifolia]
gi|298572006|gb|ADI88000.1| PPR protein [Silene latifolia]
Length = 224
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 138/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + REM+ P I+ +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
+ N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298571984|gb|ADI87989.1| PPR protein [Silene latifolia]
Length = 224
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 138/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV D+++EMK K I D++SY I +++ G++ E ME + +EM+ P I+ +W+T+++
Sbjct: 61 KVEDLVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
+ N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|413950397|gb|AFW83046.1| hypothetical protein ZEAMMB73_939845 [Zea mays]
Length = 453
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 173/368 (47%), Gaps = 36/368 (9%)
Query: 76 KRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYG 135
+R+ QALE+ WM + DHA +LDLI + + AE Y++ L+
Sbjct: 122 RRYEQALEIFSWMESCSSLRLSSWDHAARLDLIAKAYSTSQAEEYYNKLQSPATRQAASF 181
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
LL+CYV +R +K LS V+ MK
Sbjct: 182 PLLHCYVMERDHEKVLS-----------------------------------VIDLMKRN 206
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
NI + SY + +N+ S ++ ++ + + M + + + WSTY + A+ + K L +
Sbjct: 207 NIHRNVLSYNLWMNACAEVSGVDSVQSVFQVMLNDETVKVGWSTYCTLANIFRKNGLNTE 266
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLE 315
A L KAE +L +GY+F+++ YA+L + V+R+W+ K+ R + Y+ +
Sbjct: 267 AQACLVKAEAKLSPTGRLGYSFVMTCYAALNDSDGVMRMWEASKSVPGRILTAYYMAAMS 326
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKAT 375
+K+G+ +AE + +WE +D R+ N ++ Y N ++ AE + ++EKG
Sbjct: 327 CSIKVGDISQAECIFGKWEAGCRKHDVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGACP 386
Query: 376 TPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
+W ++ GY + + ++ CMK LS+ ++ W+P +++ +I ++GS D
Sbjct: 387 NYKTWEILMEGYVQSRQMDKAVGCMKKGLSL-LKSCHWRPPVELMEAIGKHFEEQGSADD 445
Query: 436 VEAFVAAL 443
++ L
Sbjct: 446 AYRYIKVL 453
>gi|298571988|gb|ADI87991.1| PPR protein [Silene latifolia]
Length = 224
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 139/223 (62%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + +EM+ P IV +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K+ ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
+ N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 97/237 (40%), Gaps = 42/237 (17%)
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
P + D Y + + Y+ A + DKA ++++ + + YN +++LY
Sbjct: 2 PDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLY-------- 53
Query: 291 VLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
MKL E ++ E+++ E + S D+ N +
Sbjct: 54 ---------------------------MKLDELDKVEELVSEMKQKKISLDSYSYNIWLS 86
Query: 351 GYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYV 408
+ G ++ E + +++ + PN +++ +A+ Y +G+ E+ QC++ L +
Sbjct: 87 ARGSQGSPESMEQVFQEM-DLDPRIVPNWTTFSTMASMYAKSGQLEKAEQCLR-NLETRI 144
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG 465
+ P + S+ LG+ G V V ++ IP YH+ I + +R+G
Sbjct: 145 TNRDRMPY-HYLLSLYGSLGNRGEVYRVWNIYKSVFPKIP--NWGYHSVISSLVRSG 198
>gi|226530081|ref|NP_001147602.1| DNA-binding protein [Zea mays]
gi|195612448|gb|ACG28054.1| DNA-binding protein [Zea mays]
Length = 622
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 231/481 (48%), Gaps = 21/481 (4%)
Query: 23 YTNRINKTTLYSIISP-------LGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKR 75
+T R++ + L +S L P ++ L+ W K+GN GEL ++ +LRKR
Sbjct: 139 HTRRLSDSILLKTLSDSILLKTVLEAPRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKR 198
Query: 76 KRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYG 135
+S+ALE+ +W+ + + F D+A LDL +V+G AE + + Y
Sbjct: 199 HWYSKALELVEWVQKSQLFEFVERDYAAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYR 258
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
LL V K+ F +MK++G ++ ++N ++ LY + + +K+ DVL M+ +
Sbjct: 259 TLLANCVSASNIKKSEQVFNRMKDLGFPVTQFSFNQLLLLYKRLDR-KKIADVLAMMEKE 317
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
++ P F+Y+I +++ G+ D+E ME ++ ME + I D + A+ A YI +K
Sbjct: 318 DVKPSLFTYKILVDAKGSVGDIEAMEKVIESME-KDSIEPDLTFNATIARHYIFYGQREK 376
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-RDYITML 314
A +LK E QK+ L+ L+A LGN V R+W AC+ + ++ +
Sbjct: 377 AEALLKAMEGDDIQKNRAACKTLLPLHAFLGNSDAVERIW----KACEDNTRVAESVSAI 432
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE-KGK 373
EA KLG+ E+AEKV ++ + + ++ NA++ Y ++ L+ + + + + E + +
Sbjct: 433 EAFGKLGDVEKAEKVFEDMLVHWKTLSSKFYNALLKVYADHNLLDKGKELAKRMDENRVR 492
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
P A+V Y +AG+ E+ + + LS+ KP ++L +G V
Sbjct: 493 FGAPTLDALVKL-YVEAGEVEKA-ESLVHKLSI---QNHIKPIYNTYMTLLDSYSKKGDV 547
Query: 434 QDVEAFVAALRTVIPMNR-QMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVC 492
++ E LR R +MY + + A + + MKAD I + ++
Sbjct: 548 RNSEKVFNKLRQSGYTGRIRMYQSLLHAYVHAKAPAYGFRERMKADNIFPNSAVSTLIAA 607
Query: 493 T 493
T
Sbjct: 608 T 608
>gi|357509403|ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500005|gb|AES81208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 223/458 (48%), Gaps = 19/458 (4%)
Query: 39 LGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP 98
+ G I L+ WV++G ++ E+ + +LR+RK + +AL++S+W+ K F
Sbjct: 165 MNGTGPTIYTALEKWVEDGKELSREEISLTMINLRRRKIYLKALQLSEWLESKKHLEFVE 224
Query: 99 CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
D+A QLDLI ++HG AE Y + + + Y LL V Q KA F KMK
Sbjct: 225 RDYASQLDLIAKLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNKMK 284
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
++ L+ N ++ LY +T + +K+ DVL M+ +N+ P +++I I+ G +D++
Sbjct: 285 DLEFPLTPFACNQLLLLYKRTDK-KKIADVLLLMEQENVKPSPLTFKILIDVKGQSNDID 343
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
GM+ I+ +M ++ I D T A YI DKA +LK+ E +++ L
Sbjct: 344 GMDQIVDQMRAE-GIEPDNYTKAVLVGHYISGGHDDKAKMLLKEMEGENLKENRWVCRLL 402
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL----KEWE 334
++LYA LG EV R+W + +T R D + +EA KL + +EAE V ++W+
Sbjct: 403 LALYAKLGMADEVGRVWKVCET---RPSVEDCVAAIEAWGKLKKIDEAEAVFEVMARKWK 459
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
L+ + + ++ Y NN ++ + +++ + KG P +W + Y AG+ E
Sbjct: 460 LTSKNC-----SVLLNVYANNKMLTKGKDLIKRMAHKGCRIGPLTWNALVKLYVQAGEVE 514
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-QM 453
+ ++ A ++ +P ++L + G + + E ++ ++R +
Sbjct: 515 KADSVLQKA----IQQSPVRPIFSSYNTLLEEYSKRGDIHNSEKIFYRMKQAGYISRLKQ 570
Query: 454 YHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
Y I+A R + D +KAD + ++ +LV
Sbjct: 571 YQILIEAYRRANVPAYGIRDRLKADNVFPNKTLANLLV 608
>gi|298572066|gb|ADI88030.1| PPR protein [Silene latifolia]
Length = 224
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 137/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + +EM+ P IV +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K +DKA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGQLDKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572010|gb|ADI88002.1| PPR protein [Silene latifolia]
gi|298572034|gb|ADI88014.1| PPR protein [Silene latifolia]
gi|298572054|gb|ADI88024.1| PPR protein [Silene latifolia]
Length = 224
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 137/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + REM+ P I+ +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|449437710|ref|XP_004136634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
gi|449506005|ref|XP_004162626.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 606
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 182/373 (48%), Gaps = 19/373 (5%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA 102
G + LD WV GN++ ++ + LR+R+ F +AL+ S+W+ G F D+A
Sbjct: 149 GLSVSSALDKWVSEGNELSWDDISSTMMSLRRRRMFGKALQFSEWLEASGQLEFNENDYA 208
Query: 103 VQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+LDLI +V G AESY + + + Y LL YV +KA F KMK++
Sbjct: 209 SRLDLIAKVQGLHKAESYIAKIPKSFQGEVMYRTLLANYVAANNVNKAEEVFNKMKDLEF 268
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
++T YN ++ LY + + K+ DVL M+ +N+ P F+Y+I I++ G D+ GME
Sbjct: 269 PMTTFAYNQVLVLYKRNDR-RKIADVLLLMEKENVKPSPFTYKILIDAKGLSKDISGMEQ 327
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
++ M+++ I LD A Y+ L DKA LK+ EE + L+ LY
Sbjct: 328 VVDTMKAE-GIELDVFALCLLAKHYVSCGLKDKAKATLKEMEEINSKGSRWPCRLLLPLY 386
Query: 283 ASLGNKSEVLRLWDLEKTACKRYIN-RDYITMLEALMKLGEHEEAE----KVLKEW---E 334
L + EV RLW++ C+ + + + + A KL EAE KV+K W +
Sbjct: 387 GELEMEDEVRRLWEI----CEANPHIEECMAAIVAWGKLKNIHEAEKIFDKVVKTWPKKK 442
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
+S Y T I + G C ++ + ++ + E G + P +W V Y +AG+ E
Sbjct: 443 ISTKHYCTMIK---VYGDCK--MLTKGKELVNQMAESGYSIDPLAWDAVVKLYVEAGEVE 497
Query: 395 RGFQCMKAALSVY 407
+ + A+ Y
Sbjct: 498 KADTFLVKAVKKY 510
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE-M 192
Y ++ Y + K +M E G ++ L ++ ++ LY + G+ EK L + +
Sbjct: 448 YCTMIKVYGDCKMLTKGKELVNQMAESGYSIDPLAWDAVVKLYVEAGEVEKADTFLVKAV 507
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
K + P SYR +N Y R D+ E I +M
Sbjct: 508 KKYEMRPLYCSYRTLMNHYARRGDVHNAEKIFYKM 542
>gi|298571976|gb|ADI87985.1| PPR protein [Silene latifolia]
gi|298571992|gb|ADI87993.1| PPR protein [Silene latifolia]
gi|298572000|gb|ADI87997.1| PPR protein [Silene latifolia]
gi|298572064|gb|ADI88029.1| PPR protein [Silene latifolia]
Length = 224
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 138/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + +EM+ P IV +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K+ ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 97/237 (40%), Gaps = 42/237 (17%)
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
P + D Y + + Y+ A + DKA ++++ + + YN +++LY
Sbjct: 2 PDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLY-------- 53
Query: 291 VLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
MKL E ++ E+++ E + S D+ N +
Sbjct: 54 ---------------------------MKLDELDKVEELVSEMKQKKISLDSYSYNIWLS 86
Query: 351 GYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYV 408
+ G ++ E + +++ + PN +++ +A+ Y +G+ E+ QC++ L +
Sbjct: 87 ARGSQGSPESMEQVFQEM-DLDPRIVPNWTTFSTMASMYAKSGQLEKAEQCLR-NLETRI 144
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG 465
+ P + S+ LG+ G V V ++ IP YH+ I + +R+G
Sbjct: 145 TNRDRMPY-HYLLSLYGSLGNRGEVYRVWNIYKSVFPNIP--NWGYHSVISSLVRSG 198
>gi|298572060|gb|ADI88027.1| PPR protein [Silene latifolia]
Length = 224
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 138/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + +EM+ P IV +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGKLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
+ N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572018|gb|ADI88006.1| PPR protein [Silene latifolia]
Length = 224
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 137/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G+ E ME + +EM+ P IV +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K+ ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572036|gb|ADI88015.1| PPR protein [Silene latifolia]
Length = 224
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 138/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + +EM+ P I+ +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K+ ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 103/247 (41%), Gaps = 44/247 (17%)
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
P + D Y + + Y+ A + DKA ++++ + + YN +++LY
Sbjct: 2 PDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLY-------- 53
Query: 291 VLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
MKL E ++ E+++ E + S D+ N +
Sbjct: 54 ---------------------------MKLDELDKVEELVSEMKQKKISLDSYSYNIWLS 86
Query: 351 GYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYV 408
+ G ++ E + +++ + PN +++ +A+ Y +G+ E+ QC++ L +
Sbjct: 87 ARGSQGSPESMEQVFQEM-DLDPRIIPNWTTFSTMASMYAKSGQLEKAEQCLR-NLETRI 144
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG--K 466
+ P + S+ LG+ G V V ++ IP YH+ I + +R+G +
Sbjct: 145 TNRDRMPY-HYLLSLYGSLGNRGEVYRVWNIYKSVFPNIP--NWGYHSVISSLVRSGDIE 201
Query: 467 GVDELLD 473
G ++L +
Sbjct: 202 GAEKLYE 208
>gi|298572008|gb|ADI88001.1| PPR protein [Silene latifolia]
gi|298572012|gb|ADI88003.1| PPR protein [Silene latifolia]
gi|298572028|gb|ADI88011.1| PPR protein [Silene latifolia]
gi|298572052|gb|ADI88023.1| PPR protein [Silene latifolia]
Length = 224
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 138/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + +EM+ P I+ +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
+ N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|297842839|ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
gi|297335142|gb|EFH65560.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 214/444 (48%), Gaps = 18/444 (4%)
Query: 42 PGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH 101
PG I LD WV+ GN++ E+ + + LR+R+ + +AL++S+W+ D+
Sbjct: 141 PGLSIGSALDKWVEEGNEITRVEVAKAMLQLRRRRMYGRALQLSEWLEANKKIEMNERDY 200
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
+ +LDL ++ G + E+Y + K Y LL V K+ F +MK++G
Sbjct: 201 SSRLDLTVKIRGLENGEAYMQKIPKSFKGEVIYRTLLANCVAAGNVKKSELVFNRMKDLG 260
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
LS T + ++ LY + + +K+ DVL M+ +N+ P +Y+I I+ GA +D+ GME
Sbjct: 261 FPLSGFTCDQMLLLYKRIDR-KKIADVLLLMEKENVKPSLLTYKILIDVKGATNDISGME 319
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
IL M+ + + D+ T A A Y A L +KA VLK+ E + + + L+S+
Sbjct: 320 QILETMKDE-GVQPDFQTQALTAKHYSGAGLKEKAEKVLKEMEGESLEANRRAFKDLLSI 378
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
YASLG + EV R+W + K Y + + + + A KL + +EAE + ++ G
Sbjct: 379 YASLGREDEVTRIWKI--CESKPYFD-ESLAAIHAFGKLNKVQEAEAIFEKIVTMGRRAS 435
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+ + ++ Y ++ ++ + +++ + E G +W + Y +AG+ E+ +
Sbjct: 436 SNTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSMLD 495
Query: 402 AALSVYVEGKGWKPDPKVITS----ILSKLGDEGSVQDVEAFVAALRTVIPMNR-QMYHA 456
A + K++ + I+ + G V + E +R V +R + + A
Sbjct: 496 KA--------SKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREVGYTSRLRQFQA 547
Query: 457 FIKANIRNGKGVDELLDSMKADGI 480
++A I + D MKAD I
Sbjct: 548 LLQAYINAKAPAYGMRDRMKADNI 571
>gi|298572058|gb|ADI88026.1| PPR protein [Silene latifolia]
Length = 224
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 136/223 (60%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + REM+ P I+ +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298571978|gb|ADI87986.1| PPR protein [Silene latifolia]
gi|298571980|gb|ADI87987.1| PPR protein [Silene latifolia]
gi|298571982|gb|ADI87988.1| PPR protein [Silene latifolia]
gi|298571990|gb|ADI87992.1| PPR protein [Silene latifolia]
gi|298571994|gb|ADI87994.1| PPR protein [Silene latifolia]
gi|298571996|gb|ADI87995.1| PPR protein [Silene latifolia]
gi|298571998|gb|ADI87996.1| PPR protein [Silene latifolia]
gi|298572002|gb|ADI87998.1| PPR protein [Silene latifolia]
gi|298572020|gb|ADI88007.1| PPR protein [Silene latifolia]
gi|298572022|gb|ADI88008.1| PPR protein [Silene latifolia]
Length = 224
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 137/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + +EM+ P IV +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|357131430|ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 612
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 222/457 (48%), Gaps = 13/457 (2%)
Query: 39 LGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP 98
L P + L WV +GN V ++ + +LR+R+ FS+AL++ +W+ +
Sbjct: 153 LEAPWNDVSGTLKKWVNDGNTVDRSDVFFAVLNLRRRRFFSKALQLLEWLEESKLIELVE 212
Query: 99 CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
D+A +LDL+ +VHG AE + N+ + Y LL V + KA F KMK
Sbjct: 213 RDYASRLDLMAKVHGIYKAEKFIDNIPASLRGEIVYRTLLANCVAEVNVKKAEEVFNKMK 272
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
++G ++ N ++ LY + + +K+ DVLT M+ +++ P F+Y++ +++ GA D+E
Sbjct: 273 DLGFPVTVFAINQLLLLYKRVDK-KKISDVLTMMEKEDVKPSLFTYKLLVDTKGASRDIE 331
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
GME +++ ME++ I D A+ A YI +KA +L+ E +++ +
Sbjct: 332 GMEKVVQSMEAE-GITPDLLLQATIAKHYIFGGHREKAEAILESMEGDMKENRN-ACKMV 389
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRD-YITMLEALMKLGEHEEAEKVLKEWELSG 337
+ LYA LG K +V R+W + C+ D ++ +EA +LG+ E+AE+V +
Sbjct: 390 MPLYAFLGKKDDVERIWKV----CQSNTRLDECLSAIEAFGRLGDVEKAEEVFGNMFKTW 445
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+ ++ NA++ Y N L+ + + + + E G ++ + Y DAG+ E+
Sbjct: 446 KTLSSKYYNAMMRVYANQNLMDKGKELAKRMEEDGCRLGISTLDSLVKLYVDAGEVEKA- 504
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-QMYHA 456
+ + LSV + K ++ SK+GD V + E + LR + R + Y
Sbjct: 505 ESLLHKLSVKNKMKPQYSSYLMLLDSYSKIGD---VHNSEKVFSKLRQMGYNGRIRQYQL 561
Query: 457 FIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCT 493
+ A + V + MKAD I + +L T
Sbjct: 562 LLHAYLHAKAPVYGFRERMKADNIFPNSVIASLLAAT 598
>gi|298572048|gb|ADI88021.1| PPR protein [Silene latifolia]
Length = 224
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 137/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+V ++++EMK K I D++SY I +++ G++ E ME + REM+ P I+ +W+T+++
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSTRGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572040|gb|ADI88017.1| PPR protein [Silene latifolia]
Length = 224
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 137/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + +EM+ P IV +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFT 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572050|gb|ADI88022.1| PPR protein [Silene latifolia]
Length = 224
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 137/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+V ++++EMK K I D++SY I +++ G++ E ME + REM+ P I+ +W+T+++
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 90/236 (38%), Gaps = 40/236 (16%)
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
P + D Y + + Y+ A + DKA ++++ + + YN +++LY L E
Sbjct: 2 PDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDE 61
Query: 291 VLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR-IPNAVI 349
V L K + Y L A G E E+V +E +L D R IPN
Sbjct: 62 VEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDL-----DPRIIPNWT- 115
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
+++ +A+ Y G+ E+ QC++ L +
Sbjct: 116 -----------------------------TFSTMASMYAKLGQLEKAEQCLR-NLETRIT 145
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG 465
+ P + S+ LG+ G V V ++ IP YH+ I + +R+G
Sbjct: 146 NRDRMPY-HYLLSLYGSLGNRGEVYRVWNIYKSVFPNIP--NWGYHSVISSLVRSG 198
>gi|298572062|gb|ADI88028.1| PPR protein [Silene latifolia]
Length = 224
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 136/223 (60%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G+ E ME + +EM+ P IV +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572024|gb|ADI88009.1| PPR protein [Silene latifolia]
gi|298572032|gb|ADI88013.1| PPR protein [Silene latifolia]
gi|298572044|gb|ADI88019.1| PPR protein [Silene latifolia]
gi|298572056|gb|ADI88025.1| PPR protein [Silene latifolia]
Length = 224
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 137/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + +EM+ P I+ +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|357119107|ref|XP_003561287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 576
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 211/457 (46%), Gaps = 12/457 (2%)
Query: 25 NRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEV 84
+RI++ L+ + L ++ LD W+++GN++ E+ ++ L+K++ + +A +
Sbjct: 105 HRIHRPYLFQTV--LDAHSLSVKSVLDKWIEDGNQLERNEVLLVLFHLKKQRLYWKAFQF 162
Query: 85 SDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQ 144
+W+ R + F D+A LDLI R G A Y + + Y LL VR
Sbjct: 163 MEWIERGHLLNFEERDYACHLDLIARNTGIEDARKYIDRVPKPFRNEVLYETLLVNCVRA 222
Query: 145 RQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSY 204
R KA FR+++++ + L+ N ++ LY + + KV D++ M+ +NI P F+Y
Sbjct: 223 RDIQKAEEVFREIRDLSLPLTVSACNQMILLYKRVAR-TKVADIIMLMEKENIKPSPFTY 281
Query: 205 RICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE 264
++ I+ G +D+ G+E+ L EM++ + D+ T A FYI LI+KA V+ + E
Sbjct: 282 KLIIDLKGRSNDISGVEVTLNEMKAA-GVEPDFVTQTMVAKFYISGGLIEKAKAVVSEIE 340
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHE 324
+ L+ LYA+L EV R+W L C D++ +EA KLG E
Sbjct: 341 MEYMKDKRHAVRSLLHLYAALSKPDEVARIWKL----CTEPKLDDFMAAIEAWGKLGCIE 396
Query: 325 EAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
+AE+ + + ++ N ++ Y N L+ + +E + G P +W +
Sbjct: 397 QAEETFEAMLEATQKLSSKYYNGMLNVYAENKLMDKGKKFVERMSFDGCPNGPLTWDALV 456
Query: 385 AGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
Y ++G+ + ++ A + +P +L G + + E L+
Sbjct: 457 KLYVNSGEVAKADSFLQNATE---QNPDRRPTYGSYIYLLMAYAKMGDIYNAEKMFDRLK 513
Query: 445 TV-IPMNRQMYHAFIKANIRNGKGVDELLDSMKADGI 480
+ P + Y ++A + ++ M+ADG+
Sbjct: 514 NIRYPGRKPPYPVLLEAYVNAKVRPHGFIERMRADGV 550
>gi|298572042|gb|ADI88018.1| PPR protein [Silene latifolia]
Length = 224
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 137/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + +EM+ P IV +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFT 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572030|gb|ADI88012.1| PPR protein [Silene latifolia]
Length = 224
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 137/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+V ++++EMK K I D++SY I +++ G++ E ME + REM+ P I+ +W+T+++
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
+ N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 KIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572026|gb|ADI88010.1| PPR protein [Silene latifolia]
gi|298572046|gb|ADI88020.1| PPR protein [Silene latifolia]
Length = 224
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 137/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + +EM+ P I+ +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572014|gb|ADI88004.1| PPR protein [Silene latifolia]
gi|298572038|gb|ADI88016.1| PPR protein [Silene latifolia]
Length = 224
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 136/223 (60%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + +EM+ P IV +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|449506011|ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 613
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 206/441 (46%), Gaps = 11/441 (2%)
Query: 42 PGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH 101
PG + LD WV G ++ ++ + +LRK + + +AL+ S+W+ G F D+
Sbjct: 156 PGLTVSSALDKWVSEGKELSRDDISSAMLNLRKCRMYGKALQFSEWLEANGKLDFVEKDY 215
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
A +LDLIG++ G AE+Y + + + Y LL V KA F KMK++
Sbjct: 216 ASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYRTLLANCVIACNVQKAEEVFNKMKDLE 275
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
++ N ++ LY +T + KV D+L M+ +N+ P F+YRI I++ G +D+ GME
Sbjct: 276 FPITAFACNQLLLLYKRTDK-RKVADILLLMEKENVKPSRFTYRILIDTKGLSNDITGME 334
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
++ M+++ I LD ST + A YI L DKA +LK+ EE + L+ L
Sbjct: 335 QVVDTMKAE-GIELDVSTLSVLAKHYISGGLKDKAKAILKEMEEINSEGSRWPCRILLPL 393
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
Y L + EV RLW++ +I + + + A KL +EAEK+ +G
Sbjct: 394 YGELQMEDEVRRLWEI--CGSNPHIE-ECMAAIVAWGKLKNIQEAEKIFDRVVKTGEKLS 450
Query: 342 TRIPNAVIIGYCNNG-LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCM 400
R + ++ Y + ++ + +++ + E G P + V Y +AG+ E+ +
Sbjct: 451 ARHYSTMLNVYREDSKMLTKGKEVVKQMAESGSRMDPVTLDAVVKLYVEAGEVEKADSFL 510
Query: 401 KAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-QMYHAFIK 459
+ Y + KP +++ + G V + E +R + R + I+
Sbjct: 511 VKTVLQYKK----KPMFTTYITLMDRYASRGDVPNAEKIFGMMRKYGYVGRLSQFQTLIQ 566
Query: 460 ANIRNGKGVDELLDSMKADGI 480
A + + + MKAD +
Sbjct: 567 AYVNAKAPAYGMRERMKADSV 587
>gi|298572960|gb|ADI88477.1| PPR protein [Silene vulgaris]
Length = 224
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 136/223 (60%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVAAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + +EM+ P I +W+T+++
Sbjct: 61 KVEELVSEMKQKKIQLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIAPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++LISLY SLGN+ EV R+W++ K+
Sbjct: 121 AAMYSKLGQLEKAEQCLRNLETRITNRDRMPYHYLISLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298572016|gb|ADI88005.1| PPR protein [Silene latifolia]
Length = 224
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 137/223 (61%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN Y + DKA + +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYGGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + +EM+ P IV +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K+ ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|298571986|gb|ADI87990.1| PPR protein [Silene latifolia]
Length = 224
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 136/223 (60%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K + YGALLN YV + DKA +M+ G ++ L YN +M LY K + +
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
KV ++++EMK K I D++SY I +++ G++ E ME + +EM+ P I+ +W+T+++
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A Y K ++KA L+ E R+ +D + Y++L+SLY SLGN+ EV R+W++ K+
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFP 180
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
N Y +++ +L++ G+ E AEK+ +EW +S+D +I N
Sbjct: 181 NIPNWGYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGN 223
>gi|297844450|ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335948|gb|EFH66365.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 221/446 (49%), Gaps = 24/446 (5%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA 102
G + LD WV+ G E + LRKR+ + +AL++++W++ D+A
Sbjct: 139 GLSVGSALDKWVEQGKDTSRTEFASAMLQLRKRRMYGRALQMTEWLDDNKQFEMKERDYA 198
Query: 103 VQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+LDLI +V G E+Y + + + Y LL+ YV A + F KMK++G
Sbjct: 199 SRLDLISKVRGLYKGEAYIETIPESFRGELVYRTLLSNYVATSNVRTAEAVFNKMKDLGF 258
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
LST T N ++ LY + + +K+ DVL M+ +N+ P+ +Y+I I++ G +D+ GME
Sbjct: 259 PLSTFTCNQMLILYKRVDK-KKIADVLLLMEKENLKPNLNTYKILIDTKGLSNDITGMEQ 317
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE-ERLEQKDGIGYNFLISL 281
I+ M+S+ + D A A Y A L +KA VLK+ E E LE+ + Y L+S+
Sbjct: 318 IVETMKSE-GVEPDLRARALIARNYASAGLKEKAEKVLKEMEGESLEENRHV-YKDLLSV 375
Query: 282 YASLGNKSEVLRLWDLEKTACK---RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
Y L EV R+W + C+ RY + + + A K+ + +EAE V ++ +
Sbjct: 376 YGFLQRADEVTRIWKI----CEEKPRY--NESLAAILAFGKIDKVKEAEAVFEKMLKMSH 429
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ + + ++ Y ++ +V + +++ +++ G + V Y +AG+ E+
Sbjct: 430 RVSSNVYSVLLRVYVDHKMVSEGKDLVKQMLDSGCNIGALTLDAVIKLYLEAGEVEKA-- 487
Query: 399 CMKAALSVYVEGKGWKPDPKVITSILSKLGD---EGSVQDVEAFVAALRTVIPMNR-QMY 454
+++LS ++ K KP +++S + +G+ G V + E ++ +R + Y
Sbjct: 488 --ESSLSKAIQSKQIKP---LMSSFMYVMGEYVRRGDVHNTEKIFQRMKQFGYQSRFRTY 542
Query: 455 HAFIKANIRNGKGVDELLDSMKADGI 480
A I+A + + D MKAD I
Sbjct: 543 QALIQAYVNAKAPAYGMKDRMKADNI 568
>gi|449506017|ref|XP_004162629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 608
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 187/389 (48%), Gaps = 11/389 (2%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
LD WV G + E+ + LRKR+ F +AL+ S+W+ G F D+A +LDLI
Sbjct: 160 LDKWVSEGKDLSRAEISLAMLHLRKRRMFGKALQFSEWLEANGQLEFNQRDYASRLDLIA 219
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+V G AESY + + + + LL YV KA F KMK++ ++ +
Sbjct: 220 KVQGLPKAESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFNKMKDLEFPMTPFAH 279
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
+ ++ LY + + K+ D+L+ M+ +N+ P F+Y+I I++ G +D+ GME ++ M++
Sbjct: 280 DQMLILYKRIDK-RKLADILSLMEKENVKPSPFTYKILIDAKGLCNDISGMEQVVDSMKA 338
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ I D ST + A Y+ L DKA +LK EE + + L+ LY +L +
Sbjct: 339 E-GIKPDVSTLSLLAKHYVSNGLKDKAKVILKDMEENNSKGSRLPCRILLPLYGALQMED 397
Query: 290 EVLRLWDLEKTACKRYIN-RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
EV RLW + C+ + + + + A KL +EAEK+ + + TR N +
Sbjct: 398 EVRRLWKI----CEANPHMEESMAAIVAWGKLKNVQEAEKIFDRFVKTWKKPSTRHYNTM 453
Query: 349 IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYV 408
+ Y + ++ + ++ + E G +W V Y +AG+ E+ + A+ Y
Sbjct: 454 MNVYGGSKMLTKGKELVNQMAESGCRMDELTWDAVVKLYVEAGEVEKADSFLVKAVQKY- 512
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQDVE 437
G KP +++ G V + E
Sbjct: 513 ---GMKPLFTSYKTLMDHYARRGDVHNAE 538
>gi|449479004|ref|XP_004155478.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 259
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 134/223 (60%), Gaps = 6/223 (2%)
Query: 21 FYYTNRI----NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRK 76
FY T + + TL+ + G+P T I LD WV+ G +V +LQ++I+ LR
Sbjct: 23 FYSTKSLPSPSTEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLRTFG 82
Query: 77 RFSQALEVSDW-MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYG 135
RF+ AL++ +W N + C +P A+QL LI + G AE YFS++ + + ++ YG
Sbjct: 83 RFNHALQLCEWERNERNKCP-SPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHKVYG 141
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
ALL+CYV + KA + +KM+E+G + L+YN ++ LY++ G++EK+ +++ EM+
Sbjct: 142 ALLHCYVENKNLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEM 201
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
I + F+Y + +N+Y A SD+ ME +L +ME+ P + DWS
Sbjct: 202 GIGHNRFTYNVRMNAYAAASDITNMEKLLSKMEADPLVATDWS 244
>gi|356503391|ref|XP_003520493.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80270, mitochondrial-like [Glycine max]
Length = 580
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 213/437 (48%), Gaps = 30/437 (6%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L+ W++ GN EL R RKRK F +AL +S+W+ K F D+A +LDLI
Sbjct: 142 LEKWLEEGN-----ELTRX----RKRKLFGRALLLSEWLESKKEFEFIERDYASRLDLIA 192
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
++ G AE Y + + Y LL V Q KA F KMK++ + ++ T
Sbjct: 193 KLRGLHKAEVYIETIPESCSREIMYRTLLANCVSQNNVKKAEEVFSKMKDLDLPITVFTC 252
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N+++ LY + + +K+ D+L M+ + I P SY I I++ G D+ GM+ I+ M++
Sbjct: 253 NELLFLYKRNDK-KKIADLLLLMENEKIKPSRHSYSILIDTKGQSKDIGGMDQIVDRMKA 311
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE-ERLEQKDGIGYNFLISLYASLGNK 288
Q I D +T A A YI A L DK +LK+ E E L+Q + L+ LYA+LG
Sbjct: 312 Q-GIEPDINTQAVLARHYISAGLQDKVETLLKQMEGENLKQNRWLC-RILLPLYANLGKV 369
Query: 289 SEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV----LKEWELSGNSYDTRI 344
EV R+W + +T RY + + +EA KL + +EAEKV +K+W+LS ++
Sbjct: 370 DEVGRIWKVCETN-PRY--DECLGAIEAWGKLNKIDEAEKVFEMMVKKWKLS-----SKT 421
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
+ ++ Y NN ++ + +++ + + G P +W + Y G+ E+ ++ A
Sbjct: 422 CSILLKVYANNEMLMKGKDLMKRIGDGGCRIGPLTWDTIVKLYVQTGEVEKADSVLQKA- 480
Query: 405 SVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-QMYHAFIKANIR 463
+ KP +IL + G + + E ++ ++ +MY + A I
Sbjct: 481 ---AQQSQMKPMFSTYLTILEQYAKRGDIHNSEKIFLRMKQADYTSKAKMYQVLMNAYIN 537
Query: 464 NGKGVDELLDSMKADGI 480
+ D +KAD I
Sbjct: 538 AKVPAYGIRDRLKADSI 554
>gi|15220095|ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42572199|ref|NP_974190.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|145327755|ref|NP_001077853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262222|sp|Q9C977.1|PP135_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80270, mitochondrial; Flags: Precursor
gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical protein; 8785-10851 [Arabidopsis thaliana]
gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis thaliana]
gi|20259918|gb|AAM13306.1| unknown protein [Arabidopsis thaliana]
gi|332198258|gb|AEE36379.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198259|gb|AEE36380.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198260|gb|AEE36381.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 211/444 (47%), Gaps = 18/444 (4%)
Query: 42 PGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH 101
PG I LD WV+ GN++ E+ + + LR+R+ + +AL++S+W+ D+
Sbjct: 140 PGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDY 199
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
A +LDL ++ G E+ + K Y LL V K+ F KMK++G
Sbjct: 200 ASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLG 259
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
LS T + ++ L+ + + +K+ DVL M+ +NI P +Y+I I+ GA +D+ GME
Sbjct: 260 FPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 318
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
IL M+ + + LD+ T A A Y A L DKA VLK+ E + + + L+S+
Sbjct: 319 QILETMKDEG-VELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSI 377
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
YASLG + EV R+W + K Y + + ++A KL + +EAE + ++
Sbjct: 378 YASLGREDEVKRIWKI--CESKPYFE-ESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRAS 434
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+ + ++ Y ++ ++ + +++ + E G +W + Y +AG+ E+ +
Sbjct: 435 SSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLD 494
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDE----GSVQDVEAFVAALRTVIPMNR-QMYHA 456
A + K++ + + DE G V + E +R +R + + A
Sbjct: 495 KA--------SKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQA 546
Query: 457 FIKANIRNGKGVDELLDSMKADGI 480
++A I + D +KAD I
Sbjct: 547 LMQAYINAKSPAYGMRDRLKADNI 570
>gi|297729245|ref|NP_001176986.1| Os12g0527850 [Oryza sativa Japonica Group]
gi|255670359|dbj|BAH95714.1| Os12g0527850 [Oryza sativa Japonica Group]
Length = 313
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 140/254 (55%), Gaps = 3/254 (1%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L W + G V+ +L R++R+LRK +RF ALE+ +WM + P DHAV LDL+
Sbjct: 48 LRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMRTQPEMRLLPGDHAVHLDLVA 107
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+V G SAE +F ++ + K T ALL+ YV+ + DKA + +M + G L +
Sbjct: 108 KVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAGYLTCALPF 167
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N +M LY +G+ EKVP+++ E++ I PD +Y I + ++ ++ E + M+
Sbjct: 168 NHMMSLYMSSGELEKVPEMIKELRRYTI-PDLVTYNIWLTYCSKKNSVKAAEKVYDLMKD 226
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG-NK 288
+ +V DW T++ YI A L K D L + E+R +K+ Y+ L++LYASL +
Sbjct: 227 E-RVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTLYASLLIDL 285
Query: 289 SEVLRLWDLEKTAC 302
+ VL L L +C
Sbjct: 286 ARVLFLHRLGDKSC 299
>gi|224089975|ref|XP_002308888.1| predicted protein [Populus trichocarpa]
gi|222854864|gb|EEE92411.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 209/443 (47%), Gaps = 24/443 (5%)
Query: 46 IEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQL 105
++ LD WV G + E+ + +LRKR+ F +AL++S+W F D+A +L
Sbjct: 103 VQSVLDKWVAEGKDLDRLEISNAMINLRKRRMFGRALQLSEWFEANKPQEFVERDYASRL 162
Query: 106 DLIGRVHGFLSAESYFSNLKDDEKTYQTYGALL-NCYVRQRQTDKALSHFRKMKEMGIAL 164
DLI +V G AE Y + K Y LL NC V KA F KM+++ +
Sbjct: 163 DLIAKVRGLHKAEVYIDKIPKSFKGEVIYRTLLANCVV-DHNVKKAEEVFNKMRDLEFPI 221
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIIL 224
+ N ++ LY + + +K+ DVL M+ +N+ P F+Y+I I++ G +D+ GM+ I+
Sbjct: 222 TPFACNQLLLLYKRLDK-KKIADVLLLMEKENVKPSLFTYKILIDTKGQSNDMTGMDQIV 280
Query: 225 REMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
M+++ I D T A A Y+ L +KA +LK+ E ++ F++ LY +
Sbjct: 281 ETMKAE-GIEPDIRTQAIMARHYVSGGLKEKAEAILKEMEGGNLEEHRWACRFMLPLYGA 339
Query: 285 LGNKSEVLRLWDLEKTACKRYINRDY-ITMLEALMKLGEHEEAEKVL----KEW-ELSGN 338
LG EV R+W C++ D + +EA +L + +EAE V K W +LS
Sbjct: 340 LGKADEVSRVWKF----CEKSPRLDECMAAIEAWGRLKKIDEAEAVFELMSKTWKKLSSR 395
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
Y T ++ Y N+ ++ + +++ + + G P +W + Y +AG+ E+
Sbjct: 396 HYST-----LLKVYANHKMLSKGKDLIKRMGDSGCRIGPLTWDALVKLYVEAGEVEKADS 450
Query: 399 CMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-QMYHAF 457
+ A V+ KP I+ + +G + + E +R R + +
Sbjct: 451 ILNKA----VQQNKIKPMYSSFLIIMERYATKGDIHNAEKMFHRMRQAGYQARIRQFQTL 506
Query: 458 IKANIRNGKGVDELLDSMKADGI 480
I+A I + + +KADGI
Sbjct: 507 IQAYIIAKAPCYGMRERLKADGI 529
>gi|125532536|gb|EAY79101.1| hypothetical protein OsI_34208 [Oryza sativa Indica Group]
Length = 369
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 147/263 (55%), Gaps = 12/263 (4%)
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG-IGYNFLISLYASLGNKSEVL 292
++ W +YA+ +++ + ++A +++E+++ +K + Y FL+++YA LG SEV
Sbjct: 108 LMTWHSYATIGKVLMQSGMEERALQAFQESEKKIAKKSNRVAYGFLLTMYADLGMNSEVD 167
Query: 293 RLWDLEKT-----ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
R+WD+ K+ AC N Y+ + L+K+ + AEK +EWE +D+R+ N
Sbjct: 168 RIWDVYKSKVPASAC----NSMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINL 223
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
++ YC GL++ AEA+++ V+KG+ N+W +A GYF G+ + K AL+
Sbjct: 224 LLTAYCKEGLMEKAEALVDQFVKKGRTPFGNTWYKLAGGYFKVGQASKAADLTKKALA-- 281
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKG 467
W PD + L+ ++ +V+ E ++ L+ ++ R +YH +K + GK
Sbjct: 282 SASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLKTYVNAGKP 341
Query: 468 VDELLDSMKADGIDEDEETKEIL 490
V +LL MK DG++ DEET++IL
Sbjct: 342 VSDLLRRMKKDGMEADEETEKIL 364
>gi|356534606|ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 600
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 220/468 (47%), Gaps = 37/468 (7%)
Query: 26 RINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVS 85
R + L+ +I L PG ++ L W G ++ E+ +R+LR+RK + +A ++
Sbjct: 131 RWTQLKLFKVI--LNAPGLSVDSALSKWAGQGKELSRKEIFLAVRELRRRKMYGRAFQLF 188
Query: 86 DWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQR 145
W+ F D+A QLDLI ++ G AE Y ++ + + Y LL Q
Sbjct: 189 QWLESNKKLEFMESDYASQLDLIAKLRGLPQAEKYIESVPESFRGELLYRTLLANCASQN 248
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
+ F KMK++ + L+ N ++ LY K +K+ DVL M+ +N+ P F+YR
Sbjct: 249 NLIASEKIFNKMKDLDLPLTVFACNQLLLLYKKL-DKKKIADVLLLMEKENVKPSLFTYR 307
Query: 206 ICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
I I+S G +D+ GME + M+ +P I L A A Y A L +KA +LK+
Sbjct: 308 ILIDSKGHSNDIAGMEQVFETMKEEGFEPDIQLQ----ALLARHYTSAGLKEKAEAILKE 363
Query: 263 AE-ERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLG 321
E E LE+K + L+ LYA+LG EV R+W + K ++ D + +EA KL
Sbjct: 364 IEGENLEEKQWVCAT-LLRLYANLGKADEVERIWKV--CESKPRVD-DCLAAVEAWGKLE 419
Query: 322 EHEEAEKVL----KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
+ EEAE V K+W+L+ +Y + ++ Y NN ++ + +++ + + G P
Sbjct: 420 KIEEAEAVFEMASKKWKLNSKNY-----SILLKIYANNKMLAKGKDLIKRMADSGLRIGP 474
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
+W + Y AG+ E+ ++ A ++ +P IL + G V + E
Sbjct: 475 LTWNALVKLYIQAGEVEKADSVLQKA----IQQSQLQPMFTTYLDILEQYAKRGDVHNSE 530
Query: 438 AFVAALRTV-----IPMNRQMYHAFIKANIRNGKGVDELLDSMKADGI 480
+R I + + A++ A + G+ E MKAD +
Sbjct: 531 KIFLKMRQAGYTSRISQFKVLMQAYVNAKV-PAYGIRE---RMKADNL 574
>gi|125532538|gb|EAY79103.1| hypothetical protein OsI_34209 [Oryza sativa Indica Group]
Length = 479
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 209/462 (45%), Gaps = 72/462 (15%)
Query: 31 TLYSIISPLGNPGTRIEPELDNW-VKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
+L+ ++ +P + P L+ W + + E+Q II+ L +R+RFSQAL++S WM
Sbjct: 83 SLFRRVAAAADPRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWMT 142
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
+ +P D A +L+LI +VHG A YF ++ D K Q
Sbjct: 143 ERLHLHLSPGDVANRLELITKVHGLDRAVEYFDSMPDQLKQQQC---------------- 186
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
Y ++ Y++ EK ++ +M+ + +++Y + +
Sbjct: 187 -------------------YGSLLKCYAEANCVEKAEELFEKMRGMGM-ASSYAYNVMMR 226
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
Y +E + + + ME + IV D ST H + VL+K +
Sbjct: 227 LYLQNGQVERVHSMHQAME-ESGIVPDVST----THTLVA---------VLRKKKT---- 268
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKT-ACKRYINRDYITMLEALMKLGEHEEAEK 328
L++ Y + + + LEK +C N Y+ + L+K+ + AEK
Sbjct: 269 --------LVAAYVVAEDIKAIENV--LEKANSC----NSMYMCRIGVLLKMNDMVGAEK 314
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+EWE +D+R+ N ++ YC GL+ AEA+++ ++KG+ N+ +A GYF
Sbjct: 315 AYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAGGYF 374
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
G+ + K AL+ W PD + L+ ++ +V+ E + L+ +I
Sbjct: 375 KVGQVSKAADLTKKALA--SASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMASLLQRLIT 432
Query: 449 MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
R +YH +K + GK V +LLD MK DG++ DEET++IL
Sbjct: 433 PTRDIYHGLLKTYVNAGKPVSDLLDRMKKDGMEADEETEKIL 474
>gi|224125312|ref|XP_002329774.1| predicted protein [Populus trichocarpa]
gi|222870836|gb|EEF07967.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 166/343 (48%), Gaps = 64/343 (18%)
Query: 104 QLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
+L+L G H + Y + + K + Y ALLNCY R++ +KA++ F+K+ ++G+
Sbjct: 4 ELNLEGPWHT--RSREYANAIPQKLKGFMVYTALLNCYAREKDVEKAVATFKKLTDIGVM 61
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII 223
S L +N +M LY +T
Sbjct: 62 RSPLVFNILMYLYFQT-------------------------------------------- 77
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL-EQKDGIGYNFLISLY 282
+V DW+TY AA +KA +++ A +LKK E ++ E+ I ++ L+ LY
Sbjct: 78 ------DGEVVGDWNTYCVAADRCLKAGIMEMAMTMLKKLEGQITEKTKSIAFDTLLKLY 131
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
A GNK E+ R+W ++ K Y N+ Y++M+ +L+ L + E AE + K+WE G SY
Sbjct: 132 ARKGNKDELYRIWKSDEKRDKIY-NKGYMSMISSLLMLDDIEAAEMMFKKWESRGLSYYF 190
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA 402
R+PN +I YC N L++ A ++++ + KG + ++W +A+GY + + MK
Sbjct: 191 RVPNILINAYCRNNLLEKAGSLIDHAMMKGSEPSADAWYSLASGYLEV-------EAMKK 243
Query: 403 ALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
A+ V GWKP + + S L L +G E F+ LRT
Sbjct: 244 AILV---CPGWKPIKETLASCLDHLEGKGDQNKAEEFIELLRT 283
>gi|357439923|ref|XP_003590239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479287|gb|AES60490.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 222/450 (49%), Gaps = 33/450 (7%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA 102
G ++ LD WV+ G ++ E+ + LR+RK + +AL+ DW+ F ++A
Sbjct: 152 GLSVDSALDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLESNKKLEFTEKEYA 211
Query: 103 VQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALL-NCYVRQ--RQTDKALSHFRKMKE 159
+LDLI ++ G AE Y ++ + + Y LL NC + R+T++ F KM+E
Sbjct: 212 SKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRKTEET---FNKMRE 268
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
+G ++ N ++ L K +K+ DVL M+ +N+ P +++Y+I I+ G +D++G
Sbjct: 269 LGFPVTAFACNQLL-LIYKKIDKKKIADVLLMMEKENVKPSSYTYKILIDVKGLSNDIDG 327
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
M I+ M+++ LD T AS A Y A L +K +LK+ E +++ L+
Sbjct: 328 MSQIVETMKAE-GCELDHLTRASLARHYAAAGLTEKTEAILKEIEGENLKENMWVCPTLL 386
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK----EWEL 335
LYA LG EV R+W + ++ + D + +EA +L + EEAE V + +W+L
Sbjct: 387 RLYAILGRADEVERIWKVCESKPRV---EDCLAAIEAWGRLKKIEEAEAVFEMMSNKWKL 443
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
+ +Y++ ++ Y + ++ + +++ + + G P +W + + Y AG+ E+
Sbjct: 444 TARNYES-----LLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDALVSLYVQAGEVEK 498
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-QMY 454
++ AL + KP +I+ + G V + E LR ++R +
Sbjct: 499 ADTVLQKAL----QQNKMKPMFTTFMTIMEQYAKRGDVHNAEKIFYRLRQANYISRISPF 554
Query: 455 HAFIKANIRNGK----GVDELLDSMKADGI 480
HA +A +N K G+ E MKAD +
Sbjct: 555 HALAQA-YKNAKLPAYGIRE---RMKADNL 580
>gi|125575301|gb|EAZ16585.1| hypothetical protein OsJ_32057 [Oryza sativa Japonica Group]
Length = 400
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 198/428 (46%), Gaps = 71/428 (16%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSN 123
E+Q II+ L +R+RFSQAL++S WM + +P D A +L+LI +V+G A YF +
Sbjct: 38 EVQSIIKYLCRRRRFSQALQLSMWMTERLHLHLSPGDVANRLELITKVYGLDRAVEYFDS 97
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D K Q YG+LL C Y++ E
Sbjct: 98 MPDQLKQQQCYGSLLKC-----------------------------------YAEANCVE 122
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
K ++ +M+ + +++Y + + Y +E + + + ME + IV D ST
Sbjct: 123 KAEELFEKMRGMGM-ASSYAYNVMMRLYLQNGQVERVHSMHQAME-ESGIVPDVST---- 176
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT-AC 302
H + VL+K + L++ Y + + + LEK +C
Sbjct: 177 THTLVA---------VLRKKKT------------LVAAYVVAEDIKAIENV--LEKANSC 213
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
N Y+ + L+K+ + AEK +EWE +D+R+ N ++ YC GL+ AE
Sbjct: 214 ----NSMYMCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAE 269
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
A+++ ++KG+ N+ +A GYF G+ + K AL+ W PD +
Sbjct: 270 ALVDQFIKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKKALA--SASNEWIPDLTNVLM 327
Query: 423 ILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDE 482
L+ ++ +V+ E ++ L+ ++ R +YH +K + GK V +LL MK DG++
Sbjct: 328 SLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLKTYVNAGKPVSDLLHRMKKDGMEA 387
Query: 483 DEETKEIL 490
DEET++IL
Sbjct: 388 DEETEKIL 395
>gi|357439973|ref|XP_003590264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479312|gb|AES60515.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 557
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 220/450 (48%), Gaps = 33/450 (7%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA 102
G ++ LD WV+ G ++ E+ + LR+RK + +AL+ DW+ F ++A
Sbjct: 103 GLSVDSALDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLESNKKLEFTEKEYA 162
Query: 103 VQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALL-NCYVRQ--RQTDKALSHFRKMKE 159
+LDLI ++ G AE Y ++ + + Y LL NC + R+T++ F KM+E
Sbjct: 163 SKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRKTEET---FNKMRE 219
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
+G ++ N ++ L K +K+ DVL M+ +N+ P +++Y+I I+ G +D++G
Sbjct: 220 LGFPVTAFACNQLL-LIYKKIDKKKIADVLLMMEKENVKPSSYTYKILIDVKGLSNDIDG 278
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
M I+ M+++ LD T AS A Y A L +K +LK+ E +++ L+
Sbjct: 279 MSQIVETMKAE-GCELDHLTRASLARHYAAAGLTEKTEAILKEIEGENLKENMWVCPTLL 337
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK----EWEL 335
LYA LG EV R+W K + D + +EA +L + EEAE V + +W+L
Sbjct: 338 RLYAILGRADEVERIW---KVCESKPRVEDCLAAIEAWGRLKKIEEAEAVFEMMSNKWKL 394
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
+ +Y++ ++ Y + ++ + +++ + + G P +W + + Y AG+ E+
Sbjct: 395 TARNYES-----LLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDALVSLYVQAGEVEK 449
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-QMY 454
++ AL + KP +I+ + G V + E LR ++R +
Sbjct: 450 ADTVLQKAL----QQNKMKPMFTTFMTIMEQYAKRGDVHNAEKIFYRLRQANYISRISPF 505
Query: 455 HAFIKANIRNGK----GVDELLDSMKADGI 480
HA +A +N K G+ E MKAD +
Sbjct: 506 HALAQA-YKNAKLPAYGIRE---RMKADNL 531
>gi|56783681|dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|56784204|dbj|BAD81589.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|125569936|gb|EAZ11451.1| hypothetical protein OsJ_01319 [Oryza sativa Japonica Group]
Length = 611
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 219/469 (46%), Gaps = 12/469 (2%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
I K+ + + L +P + W+ +GN + EL ++ LRKRK +++AL++ +
Sbjct: 139 IKKSQSTLLKALLVSPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLE 198
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQ 146
++ + D+A ++DL+ +VHG AE Y N+ + Y LL V
Sbjct: 199 YVEESKLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIAN 258
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
K F KMK++G ++ + N ++ LY + + +K+ DVLT M+ +N+ P F+Y++
Sbjct: 259 VKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKL 317
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
+++ GA D+E ME +++ M++ I D A+ A YI +KA +L++ E
Sbjct: 318 LVDTKGAARDIEDMEKVIQAMQAD-GIEPDLLIQATIARHYIFGGYREKAEAILEQIEGD 376
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YITMLEALMKLGEHEE 325
++ F++ LYA LG K++V R+W + C+ D ++ +EA KLG+ E+
Sbjct: 377 DINENRSACKFVLPLYAFLGKKADVERIWKV----CEVNARLDECMSAIEAFGKLGDVEK 432
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
AE++ + + + NA++ Y N L + + + + + G P++ +
Sbjct: 433 AEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVK 492
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
Y DAG+ E+ + L KP +L +G V + E + +R
Sbjct: 493 LYSDAGEVEKA----DSILHKLSYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQ 548
Query: 446 VIPMNR-QMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCT 493
+ R + Y ++A + + MKAD I + +L T
Sbjct: 549 MGYTGRIRQYQLLLEAYLNAKTPPYGFKERMKADDIFPNRAVASLLAAT 597
>gi|125525413|gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
Length = 611
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 219/469 (46%), Gaps = 12/469 (2%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
I K+ + + L +P + W+ +GN + EL ++ LRKRK +++AL++ +
Sbjct: 139 IKKSQSTLLKALLVSPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLE 198
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQ 146
++ + D+A ++DL+ +VHG AE Y N+ + Y LL V
Sbjct: 199 YVEESKLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIAN 258
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
K F KMK++G ++ + N ++ LY + + +K+ DVLT M+ +N+ P F+Y++
Sbjct: 259 VKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKL 317
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
+++ GA D+E ME +++ M++ I D A+ A YI +KA +L++ E
Sbjct: 318 LVDTKGATRDIEDMEKVIQAMQAD-GIEPDLLIQATIARHYIFGGYREKAEAILEQIEGD 376
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YITMLEALMKLGEHEE 325
++ F++ LYA LG K++V R+W + C+ D ++ +EA KLG+ E+
Sbjct: 377 DINENRSACKFVLPLYAFLGKKADVERIWKV----CEVNARLDECMSAIEAFGKLGDVEK 432
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
AE++ + + + NA++ Y N L + + + + + G P++ +
Sbjct: 433 AEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVK 492
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
Y DAG+ E+ + L KP +L +G V + E + +R
Sbjct: 493 LYSDAGEVEKA----DSILHKLSYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQ 548
Query: 446 VIPMNR-QMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCT 493
+ R + Y ++A + + MKAD I + +L T
Sbjct: 549 MGYTGRIRQYQLLLEAYLNAKTPPYGFKERMKADDIFPNRAVASLLAAT 597
>gi|5103846|gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]
Length = 623
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 219/448 (48%), Gaps = 28/448 (6%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA 102
G + LD WV+ G E + + LRKR+ F +AL++++W++ D+A
Sbjct: 168 GLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYA 227
Query: 103 VQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+LDLI +V G+ E+Y + + + Y LL +V A + F KMK++G
Sbjct: 228 CRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGF 287
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
LST T N ++ LY + + +K+ DVL ++ +N+ P+ +Y+I I++ G+ +D+ GME
Sbjct: 288 PLSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQ 346
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE-ERLEQKDGIGYNFLISL 281
I+ M+S+ + LD A A Y A L +KA VLK+ E E LE+ + + L+S+
Sbjct: 347 IVETMKSEG-VELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKD-LLSV 404
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA-------EKVLK-EW 333
Y L + EV R+W + C+ N Y +L A++ G+ ++ EKVLK
Sbjct: 405 YGYLQREDEVRRVWKI----CEE--NPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSH 458
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
+S N Y + ++ Y ++ +V + +++ + + G +W V Y +AG+
Sbjct: 459 RVSSNVY-----SVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEV 513
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-Q 452
E+ +++LS ++ K KP ++ + G V + E ++ +R
Sbjct: 514 EKA----ESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFW 569
Query: 453 MYHAFIKANIRNGKGVDELLDSMKADGI 480
Y I+A + + + MKAD I
Sbjct: 570 AYQTLIQAYVNAKAPAYGMKERMKADNI 597
>gi|11138066|dbj|BAB17739.1| putative DNA-binding protein [Oryza sativa Japonica Group]
Length = 591
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 219/469 (46%), Gaps = 12/469 (2%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
I K+ + + L +P + W+ +GN + EL ++ LRKRK +++AL++ +
Sbjct: 119 IKKSQSTLLKALLVSPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLE 178
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQ 146
++ + D+A ++DL+ +VHG AE Y N+ + Y LL V
Sbjct: 179 YVEESKLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIAN 238
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
K F KMK++G ++ + N ++ LY + + +K+ DVLT M+ +N+ P F+Y++
Sbjct: 239 VKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKL 297
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
+++ GA D+E ME +++ M++ I D A+ A YI +KA +L++ E
Sbjct: 298 LVDTKGAARDIEDMEKVIQAMQAD-GIEPDLLIQATIARHYIFGGYREKAEAILEQIEGD 356
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY-ITMLEALMKLGEHEE 325
++ F++ LYA LG K++V R+W + C+ D ++ +EA KLG+ E+
Sbjct: 357 DINENRSACKFVLPLYAFLGKKADVERIWKV----CEVNARLDECMSAIEAFGKLGDVEK 412
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
AE++ + + + NA++ Y N L + + + + + G P++ +
Sbjct: 413 AEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVK 472
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
Y DAG+ E+ + L KP +L +G V + E + +R
Sbjct: 473 LYSDAGEVEKA----DSILHKLSYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQ 528
Query: 446 VIPMNR-QMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCT 493
+ R + Y ++A + + MKAD I + +L T
Sbjct: 529 MGYTGRIRQYQLLLEAYLNAKTPPYGFKERMKADDIFPNRAVASLLAAT 577
>gi|145335742|ref|NP_173001.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806396|sp|Q9XI21.2|PPR44_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15480, mitochondrial; Flags: Precursor
gi|332191207|gb|AEE29328.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 594
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 219/448 (48%), Gaps = 28/448 (6%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA 102
G + LD WV+ G E + + LRKR+ F +AL++++W++ D+A
Sbjct: 139 GLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYA 198
Query: 103 VQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+LDLI +V G+ E+Y + + + Y LL +V A + F KMK++G
Sbjct: 199 CRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGF 258
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
LST T N ++ LY + + +K+ DVL ++ +N+ P+ +Y+I I++ G+ +D+ GME
Sbjct: 259 PLSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQ 317
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE-ERLEQKDGIGYNFLISL 281
I+ M+S+ + LD A A Y A L +KA VLK+ E E LE+ + + L+S+
Sbjct: 318 IVETMKSEG-VELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKD-LLSV 375
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA-------EKVLK-EW 333
Y L + EV R+W + C+ N Y +L A++ G+ ++ EKVLK
Sbjct: 376 YGYLQREDEVRRVWKI----CEE--NPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSH 429
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
+S N Y + ++ Y ++ +V + +++ + + G +W V Y +AG+
Sbjct: 430 RVSSNVY-----SVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEV 484
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-Q 452
E+ +++LS ++ K KP ++ + G V + E ++ +R
Sbjct: 485 EKA----ESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFW 540
Query: 453 MYHAFIKANIRNGKGVDELLDSMKADGI 480
Y I+A + + + MKAD I
Sbjct: 541 AYQTLIQAYVNAKAPAYGMKERMKADNI 568
>gi|296090465|emb|CBI40661.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 125/220 (56%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRK 91
L S I L P + L W+ GN+V + EL+ I ++LR+ +R+ ALE+S+WM
Sbjct: 53 LKSRIFKLRLPKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMVSH 112
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
+ D+AV++DL+ RV G +AE YF L KT +TY ALL+ Y + +KA
Sbjct: 113 DEFELSDSDNAVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAE 172
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
+ ++KE + L+ L YN++M LY GQ EKV V+ E+K + + PD F+Y + ++S
Sbjct: 173 ELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSC 232
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
A D++G+ IL+EM + W Y + A+ YI A+
Sbjct: 233 AATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMAD 272
>gi|449437712|ref|XP_004136635.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 204/444 (45%), Gaps = 17/444 (3%)
Query: 42 PGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH 101
PG + LD WV G ++ ++ + +LRK + + +AL+ S+W+ G F D+
Sbjct: 148 PGLTVSSALDKWVSEGKELSRDDISSAMLNLRKCRMYGKALQFSEWLEANGKLDFVEKDY 207
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDD---EKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
A +LDLIG++ G AE+Y + + E YQT L+NC + KA F KMK
Sbjct: 208 ASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYQTL--LVNCVIAS-NVHKAEKVFNKMK 264
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
+ ++ N ++ LY +T + K+ DVL MK +N+ +YRI I+ G +D+
Sbjct: 265 NLEFPITAFACNQLLLLYKRTDK-RKIADVLLLMKKENVKYSTSTYRILIDVNGLSNDIT 323
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
GME ++ M+++ I LD T + Y+ L DKA +LK+ EE + L
Sbjct: 324 GMEEVVDSMKAE-GIKLDVETLSRLVKHYVSGGLKDKAKAILKEMEEINSEGSRWPCRIL 382
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
+ LY L + EV RLW++ +I + + + A KL +EAEK+ +G
Sbjct: 383 LPLYGELQMEDEVRRLWEI--CGSNPHIE-ECMAAIVAWGKLKNIQEAEKIFDRVVKTGE 439
Query: 339 SYDTRIPNAVIIGYCNNG-LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
R + ++ Y + ++ + +++ + E G P + V Y +AG+ E+
Sbjct: 440 KLSARHYSTMLNVYREDSKMLTKGKEVVKQMAESGSRMDPVTLDAVVKLYVEAGEVEKAD 499
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-QMYHA 456
+ + Y + KP +++ + G V + E +R + R +
Sbjct: 500 SFLVKTVLQYKK----KPMFTTYITLMDRYASRGDVPNAEKIFGMMRKYGYVGRLSQFQT 555
Query: 457 FIKANIRNGKGVDELLDSMKADGI 480
I+A + + + MKAD +
Sbjct: 556 LIQAYVNAKAPAYGMRERMKADSV 579
>gi|6958202|gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
Length = 612
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 213/457 (46%), Gaps = 12/457 (2%)
Query: 39 LGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP 98
L P + L W+ GN ++ +I +LRKRK + +AL++ +W+ +
Sbjct: 153 LEAPRNGVSGTLKKWLDGGNTFDRSDIFYVIMNLRKRKFYFKALQLLEWLEDSKVIDLGE 212
Query: 99 CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
D+A +LDL+ +VHG AE Y ++ + Y LL V + K+ F KMK
Sbjct: 213 RDYASRLDLVAKVHGVYKAEKYIDSIPISHRGEIVYRTLLANCVSEANVKKSEEVFNKMK 272
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
++G ++ N ++ LY + + +K+ DVL +M+ +N+ P F+Y++ +++ GA D+
Sbjct: 273 DLGFPVTVFAINQLLLLYKRVDK-KKIADVLAKMEKENVKPSLFTYKLLVDTKGAIRDIA 331
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
GME ++ M+++ + D A+ A YI A +KA +L+ E + + L
Sbjct: 332 GMEKVVESMQAE-GVEPDLLFQATIAKHYIFAGHREKAEAILESMEGGDIKGNRNACKIL 390
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRD-YITMLEALMKLGEHEEAEKVLKEWELSG 337
+ LYA LG K +V R+W + C+ D ++ +E+ +LG+ E AEKV ++ +
Sbjct: 391 LPLYAFLGKKDDVERMWQV----CEANPRLDECLSAIESFGRLGDVERAEKVFEDMFATW 446
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+ ++ NA++ Y + L + + + + + E G ++ + Y AG+ ++
Sbjct: 447 KTLSSKFYNALMKVYADQNLFKKGKELAKRMDEDGCRLGISTIDSLVKLYVGAGEVDKA- 505
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-QMYHA 456
++ L + KP +L +G + + E LR + R + Y
Sbjct: 506 ---ESILHKLSKSNKMKPQYSSYLMLLDTYSKKGDIHNSEKVFDQLRQMGYNGRVRQYQL 562
Query: 457 FIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCT 493
+ A + V + MKAD I + +L T
Sbjct: 563 LLNAYVHAKTPVYGFRERMKADNIFPNSVIASLLAAT 599
>gi|307136024|gb|ADN33878.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 470
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 169/337 (50%), Gaps = 8/337 (2%)
Query: 42 PGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH 101
PG + LD WV G ++ ++ + LR+R+ F +AL+ S+W+ G V D+
Sbjct: 141 PGLSVPSALDKWVSEGKELSRADISLTMLYLRRRRMFGKALKFSEWLEANGKLV-TDRDY 199
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
A QLDLIG++ G AE+Y S + + Y LL V KA F KMK++
Sbjct: 200 ASQLDLIGKLRGLRMAENYISKIPKSFQGEVVYRTLLANCVMSTNVRKAEEVFNKMKDLE 259
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
++ N ++ LY +T + +K+ DVL M+ +N+ P F+Y+I I++ G +D+ GME
Sbjct: 260 FPITAFACNQLLLLYKRTDK-KKIADVLLLMEKENVKPSPFTYKILIDAKGLSNDISGME 318
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
++ M+++ I L T A Y+ A L DKA LK+ EE + FL+ L
Sbjct: 319 QVVDTMKAE-GIKLGVGTLLLLAKHYVSAGLKDKAKATLKETEEINSKGSRRPCRFLLPL 377
Query: 282 YASLGNKSEVLRLWDLEKTACKRYIN-RDYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
Y L + EV RLW++ C+ + + + + A KL +EAEK+ +G
Sbjct: 378 YGELQMEDEVRRLWEI----CESNPHVEECMAAIVAWGKLKNVQEAEKIFDRVVKTGKKL 433
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
TR + ++ Y ++ ++ + ++ + E G + P
Sbjct: 434 STRHYSTMMNVYRDSKMLTKGKELVNQMAESGCSMDP 470
>gi|356498381|ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 609
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 216/461 (46%), Gaps = 23/461 (4%)
Query: 26 RINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVS 85
R ++ L+ I+ PG ++ L+ WV++G ++ E+ +R+LR+RK + +A ++
Sbjct: 140 RRTQSELFKAIA--NAPGLSVDSALNKWVEHGKELSRKEILLAVRELRRRKMYGRAFQLF 197
Query: 86 DWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQR 145
W+ F D+A QLDLI ++ G AE Y ++ + + Y LL Q
Sbjct: 198 QWLESNKKLEFMESDYASQLDLIAKLRGLPKAEKYIESVPESFRGELLYRTLLANCASQN 257
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
F KMK++ + L+ N ++ LY K +K+ DVL M+ +N+ P F+YR
Sbjct: 258 NLIATEKIFNKMKDLDLPLTAFACNQLLLLYKKL-DKKKIADVLLLMEKENVKPSLFTYR 316
Query: 206 ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE- 264
I I+S G +D+ GME + M+ + D A A Y + L +KA +LK+ E
Sbjct: 317 ILIDSKGQSNDIAGMEQVFETMKEE-GFEPDIQIQALLARHYTSSGLKEKAEAMLKEMEG 375
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHE 324
E L++ + L+ LYA+LG EV R+W K + D + +EA KL + E
Sbjct: 376 ENLKENQWVCAT-LLRLYANLGKADEVERIW---KVCESKPRVEDCLAAVEAWGKLNKIE 431
Query: 325 EAEKVL----KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
EAE V K+W+L+ +Y + ++ Y NN ++ + +++ + + G P +W
Sbjct: 432 EAEAVFEMVSKKWKLNSKNY-----SVLLKIYANNKMLTKGKELVKLMADSGVRIGPLTW 486
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
+ Y AG+ E+ + A ++ +P +IL + G V + E
Sbjct: 487 DALVKLYIQAGEVEKADSILHKA----IQQNQLQPMFTTYLAILEQYAKRGDVHNSEKIF 542
Query: 441 AALRTVIPMNR-QMYHAFIKANIRNGKGVDELLDSMKADGI 480
+R +R + I+A + + + +KAD +
Sbjct: 543 LKMRQAGYTSRISQFQVLIQAYVNAKVPAYGIRERIKADNL 583
>gi|449506007|ref|XP_004162627.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 207/447 (46%), Gaps = 24/447 (5%)
Query: 42 PGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH 101
P + L WV GNK+ ++ + LR+R+ F +AL+ S+W+ G F D+
Sbjct: 154 PDFSVASALVKWVSQGNKLSRDDISSTMISLRRRQMFRKALQFSEWLEANGQLEFNERDY 213
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
A ++ LI +V G AESY + + + + ALL YV +KA F K+K++
Sbjct: 214 ASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVVANNVEKAEEVFNKIKDLE 273
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
+S YN ++ LY K + K+ DVL M+ +NI P F+Y+I I+ G +D+ GME
Sbjct: 274 FPMSIFAYNQMLVLYKKIDR-RKIADVLLLMEKENIKPCPFTYKILIDGKGLSNDISGME 332
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
++ M+++ I LD ST + A Y+ L KA +LK+ EE L+
Sbjct: 333 QVVDSMKAE-GIELDVSTLSLLAKHYVSCGLKVKAKAILKEIEETNSNGPQWLCRILLPF 391
Query: 282 YASLGNKSEVLRLWDLEKTACKRYIN-RDYITMLEALMKLGEHEEAEK----VLKEW-EL 335
Y L + EV RLW++ C+ + + + + A +L +EAEK V+K W +L
Sbjct: 392 YGKLQMEDEVRRLWEI----CEANPHIEECMAAIVAWGQLKNVQEAEKIFDRVVKTWKKL 447
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
S Y + ++ Y ++ ++ + ++ + E G + + Y +AG+ E+
Sbjct: 448 SARHY-----SIMMNVYRDSKMLTKGKEVVNQMAESGCHIDLLTCNAIVKLYVEAGEVEK 502
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR--TVIPMNRQM 453
+ A+ Y G KP +++ G V + E +R + IP Q
Sbjct: 503 ADSFLVKAVKKY----GMKPLFTSYKTLMDHYARRGDVHNAEKIFDKMRQSSYIPRLGQ- 557
Query: 454 YHAFIKANIRNGKGVDELLDSMKADGI 480
+ I+A + + + M AD +
Sbjct: 558 FGTLIQAYVNAKTPAYGMRERMMADKV 584
>gi|224072985|ref|XP_002303946.1| predicted protein [Populus trichocarpa]
gi|222841378|gb|EEE78925.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 192/413 (46%), Gaps = 19/413 (4%)
Query: 79 SQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALL 138
S +L+ S+W+ R F D+A LD I +V G AE + + + + Y LL
Sbjct: 31 SVSLQFSEWLERSKQTDFTERDYACHLDCIAKVLGLWKAEKFIEKIPESFRGKLVYQTLL 90
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
V KA S FRKM+++G+ ++ ++ +Y + + +K+P++L MK +NI
Sbjct: 91 ASCVSVLNIKKAESVFRKMRDLGLPITVEACEQMIIIYKRL-EKKKIPNILLMMKDQNIK 149
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
P +Y++ I++ +D GME ++ M ++ + LD A A YI L DKA
Sbjct: 150 PSFLTYKLLIDAKCQFNDTTGMEKLVEAMRNE-GMELDVFALAVIARHYISVGLKDKADL 208
Query: 259 VLKKAEERLEQKDGIGY-NFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEAL 317
+LK+ E+R ++ G+G L+SLYASLGN EV R+W K K+ + I + A
Sbjct: 209 ILKQIEKRKQKGGGLGARRSLLSLYASLGNADEVGRIWKECKADPKQ---SECIAAIRAW 265
Query: 318 MKLGEHEEAEKV----LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
KLG+ EEAE V L+ W+ Y T + N Y +N L + ++E + + G
Sbjct: 266 GKLGKVEEAEAVSEMMLQTWKNPTFGYYTSLLNV----YIDNNLTSKGKDLVEQMGDIGS 321
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
P +W + Y +G E+ + L K +P +++ G +
Sbjct: 322 WAGPLTWDALVRLYIKSGDVEKA----HSILLKVARMKRKRPLYTTCIAVMEHYAKRGDI 377
Query: 434 QDVEAFVAALRTVIPMNR-QMYHAFIKANIRNGKGVDELLDSMKADGIDEDEE 485
+ E ++R + R + + + A I + L MKAD + +E
Sbjct: 378 HNTEKLFQSMRELGYTARFKPFEILVDAYINAKTPIYGLRARMKADNLYPKKE 430
>gi|125535921|gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
Length = 611
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 215/469 (45%), Gaps = 12/469 (2%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
I K+ + + L +P + L W+ +GN + EL ++ LR+RK + +AL++ +
Sbjct: 139 IKKSQSTLLKALLESPRVDVAGALKKWLNDGNTLDRSELFYVLLSLRRRKLYIKALQLLE 198
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQ 146
++ + D+A ++DL+ + H AE Y N+ + Y LL V
Sbjct: 199 YVEESKLIDLGERDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIAN 258
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
KA F KMK++G +S + N ++ LY + + +K+ DVLT M+ +N+ P F+Y++
Sbjct: 259 VKKAEQVFNKMKDLGFPVSVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKL 317
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
+++ GA D+E ME +++ M++ I D A+ A YI +KA +L++
Sbjct: 318 LVDTKGAARDIEDMEKVIQAMQAD-GIEPDLLFQATIARHYIFGGYREKAEAILEQMVGD 376
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YITMLEALMKLGEHEE 325
++ F++ LYA LG +V R+W + C+ D ++ +EA KLG+ E+
Sbjct: 377 DINENRSACKFVLPLYAFLGKNDDVERIWKV----CEANARLDECMSAIEAFGKLGDVEK 432
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
AE++ + + ++ NA++ Y N L + + + + + G P + +
Sbjct: 433 AEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPYTLDSLVK 492
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
Y DAG+ E+ + L KP +L +G V + E + +R
Sbjct: 493 LYSDAGEVEKA----DSILHKLSYKNKIKPMYTTYLMLLDSYSKKGDVHNAEKLFSKVRQ 548
Query: 446 VIPMNR-QMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCT 493
+ R + Y ++A + + MKAD I + +L T
Sbjct: 549 MGYTGRIRQYQLLLEAYLNAKTPPYGFKERMKADDIFPNRAVASLLAAT 597
>gi|302789381|ref|XP_002976459.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
gi|300156089|gb|EFJ22719.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
Length = 509
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 212/455 (46%), Gaps = 17/455 (3%)
Query: 45 RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQ 104
R+ P + W++ GN V L R++R LR RKR+ QAL DW+ + + F + +
Sbjct: 47 RVVPAIKQWIREGNSVTSCGLDRVVRRLRSRKRYLQALMAVDWVANEKVIPFGYHETLQR 106
Query: 105 LDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIAL 164
LDL R H F L + Y LL Y ++ + A ++++ +GI
Sbjct: 107 LDLCSRCHHVTRTLLLFRRLPKQWRGEDAYCILLEMYYKRDMLEDAEKTMQELRGIGIK- 165
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI---NSYGARSDLEGME 221
S Y+ ++ Y G + ++TE+K + D Y I + +S+G D+ +E
Sbjct: 166 SLQPYHLMLSFYKLRGMEMRFERMVTEIKGSGLALDRSFYTILLAARDSFGG--DMVAVE 223
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF---- 277
+L EME + + LD + A Y+++ L K+ VL++ E+ L+ + N
Sbjct: 224 DVLAEMEGR-GLKLDAVGCLAVAGIYLRSGLRHKSERVLQRLEKSLKSGEFKYSNSIRRR 282
Query: 278 LISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
+++++ LG++ V R+W +E++A D+I +EA ++G+ +EAE + +
Sbjct: 283 MLAMFGKLGDRDAVDRIWHSIERSASTTV--EDFIFGIEAFGRVGKMDEAEDMY--MRVG 338
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
NS + R+ NA + G V A A++E + + ++ ++ Y AG R
Sbjct: 339 CNSCNPRLHNAFLAVLVEQGDVIRAVALVERMKGVRCLLSTVTYHLLIKVYLKAGDVSRA 398
Query: 397 FQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAA-LRTVIPMNRQMYH 455
++ S + + + +P + + +L G VQ E V + P++ ++H
Sbjct: 399 TLAFESLRSAFGKLEWPRPSSETLAVMLEFFVGTGDVQASERLVKKWMEDGFPLSAAVFH 458
Query: 456 AFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ ++ + G GVD M + G++ ET+++L
Sbjct: 459 SLVRVYAKGGAGVDNFPGRMLSAGVEPTRETEQLL 493
>gi|414884017|tpg|DAA60031.1| TPA: hypothetical protein ZEAMMB73_016344 [Zea mays]
Length = 703
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 183/369 (49%), Gaps = 11/369 (2%)
Query: 29 KTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM 88
K L+ I+ L + + P LD WVK GN++ ++ ++ LRK++ +++AL+ +W+
Sbjct: 247 KPFLFQIV--LDTSMSSLMPVLDGWVKIGNRLERDKVNMVLFHLRKQRMYNKALKFVEWI 304
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALL-NCYVRQRQT 147
R+ + F D+A LDLI R +G +A+ Y + + ++ Y LL NC R
Sbjct: 305 ERRKLLNFEERDYASHLDLIARNYGVEAAQKYIERVPEAFRSEVLYETLLVNCVCRD-DA 363
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
KA F +++E+ + L+ N ++ LY + + KV D+LT M+ +NI F+Y++
Sbjct: 364 QKAEQVFNEIRELSLPLTISACNQMLLLYKRVSR-NKVVDILTLMEKENIKYSIFTYKLM 422
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
I+ +D+ GME +L M+ + +++ A FYI +KA +V+ E +
Sbjct: 423 IDLKVRSNDILGMEQVLNSMKEN-GLEPNFTIQTMVAKFYISGCFTEKAEEVINAMEVHV 481
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAE 327
+ + L+ LYA LG +V R+W+L C D++ ++A KLG E AE
Sbjct: 482 -KANRHAVRSLLDLYAILGRPVDVERVWNL----CAEPKLEDFLAAIKAWSKLGHIERAE 536
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
++ + ++ NA++ Y N L+ ++ +E + G P +W V Y
Sbjct: 537 EIFDVLVKTFPKLTSKYFNAMLEVYAENKLLDKSKKFIERMCLDGCTIGPLTWDAVVKLY 596
Query: 388 FDAGKTERG 396
+ G+ +
Sbjct: 597 VNLGELSKA 605
>gi|297739953|emb|CBI30135.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/475 (23%), Positives = 222/475 (46%), Gaps = 17/475 (3%)
Query: 7 LSTNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQ 66
L T+T + R R++ +I++ P I L+ W + G + E+
Sbjct: 140 LDTDTDVSEKRSPR----KRVSSELFKAIMAASDQP---IHSVLNKWDQEGKDMSRAEIA 192
Query: 67 RIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD 126
+ + +LRK + F +AL+ S+WM D+A ++DLI +V G AE Y +
Sbjct: 193 QTMLNLRKIRMFLKALQFSEWMEEHKKLDMVERDYASRVDLIAKVRGLQKAEHYIEKIPK 252
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
+ Y LL V KA F KMK++G ++T N ++ LY + + +K+
Sbjct: 253 SFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFPITTFACNQLLLLYKRVDK-KKIA 311
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
DVL M+ +++ P F+Y + I++ G +D+ GME I+ M+++ I + +
Sbjct: 312 DVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITGMEQIVETMKAE-GIEPNLQVQSILVRH 370
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y+ L +KA +LK+ E +++ L+ YA+LG +V R+W + ++ +
Sbjct: 371 YVFGGLKEKAEAILKEMEGGNLKENRWVCRVLLPPYAALGKADDVERIWKVCESNPRL-- 428
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+++ +EA KL + EEAE + + + ++ +A++ Y ++ ++ + +++
Sbjct: 429 -PEFVAAIEAYGKLKKVEEAEAIFNKMSKTFKRLSSKHYSALLKVYADHKMLIKGKDLVK 487
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ + G P +W + Y +AG+ E+ + ++ A+ + KP +I+ +
Sbjct: 488 QMSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKAM----QQSPIKPMFSTYMAIMDQ 543
Query: 427 LGDEGSVQDVEAFVAALRTVIPMNR-QMYHAFIKANIRNGKGVDELLDSMKADGI 480
G + + E +R ++R + + I+A + + + MKAD I
Sbjct: 544 YAKRGDIHNSEKMFHQMRQSGYVSRLRQFQCLIQAYVNAKAPAYGIKERMKADNI 598
>gi|225441211|ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Vitis vinifera]
Length = 587
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/475 (23%), Positives = 222/475 (46%), Gaps = 17/475 (3%)
Query: 7 LSTNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQ 66
L T+T + R R++ +I++ P I L+ W + G + E+
Sbjct: 103 LDTDTDVSEKRSPR----KRVSSELFKAIMAASDQP---IHSVLNKWDQEGKDMSRAEIA 155
Query: 67 RIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD 126
+ + +LRK + F +AL+ S+WM D+A ++DLI +V G AE Y +
Sbjct: 156 QTMLNLRKIRMFLKALQFSEWMEEHKKLDMVERDYASRVDLIAKVRGLQKAEHYIEKIPK 215
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
+ Y LL V KA F KMK++G ++T N ++ LY + + +K+
Sbjct: 216 SFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFPITTFACNQLLLLYKRVDK-KKIA 274
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
DVL M+ +++ P F+Y + I++ G +D+ GME I+ M+++ I + +
Sbjct: 275 DVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITGMEQIVETMKAE-GIEPNLQVQSILVRH 333
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y+ L +KA +LK+ E +++ L+ YA+LG +V R+W + ++ +
Sbjct: 334 YVFGGLKEKAEAILKEMEGGNLKENRWVCRVLLPPYAALGKADDVERIWKVCESNPRL-- 391
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+++ +EA KL + EEAE + + + ++ +A++ Y ++ ++ + +++
Sbjct: 392 -PEFVAAIEAYGKLKKVEEAEAIFNKMSKTFKRLSSKHYSALLKVYADHKMLIKGKDLVK 450
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ + G P +W + Y +AG+ E+ + ++ A+ + KP +I+ +
Sbjct: 451 QMSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKAM----QQSPIKPMFSTYMAIMDQ 506
Query: 427 LGDEGSVQDVEAFVAALRTVIPMNR-QMYHAFIKANIRNGKGVDELLDSMKADGI 480
G + + E +R ++R + + I+A + + + MKAD I
Sbjct: 507 YAKRGDIHNSEKMFHQMRQSGYVSRLRQFQCLIQAYVNAKAPAYGIKERMKADNI 561
>gi|297800434|ref|XP_002868101.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
gi|297313937|gb|EFH44360.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 171/354 (48%), Gaps = 26/354 (7%)
Query: 20 RFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFS 79
R Y T L S I N I P L +W K G++V+ +L+ I++LR +FS
Sbjct: 25 RSYGTVSAADQNLPSRIVTNSNQNAHITPMLASWQKQGHQVKPSDLRGFIKNLRGSNQFS 84
Query: 80 QALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLN 139
+ALE S+WM + + P D++ +L L+ V G AE +F ++ + Y Y LL+
Sbjct: 85 KALEASEWMGEQKVFDIVPEDYSARLHLVENVLGLEEAEKFFKSIPKNMTDYFVYATLLS 144
Query: 140 CYVRQRQT-DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
Y + T DKA + F KM+E+G L +N ++ LY + + + V ++ EM+ +
Sbjct: 145 SYTKSENTLDKAEATFEKMRELGFLLKPSPFNSMISLYGQLQKLDMVEKLVREMQETKVE 204
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
D+ + + Y ++ ME ++ Q I L+ T + A Y+++ I+KA
Sbjct: 205 CDSPTVNNVLRVYADTCKIKAMETFKTWVDEQ-GIKLEGGTIVAMAKAYLRSGSIEKA-- 261
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASL-GNKSEVLRLWDLEKTACKRYINRDYITMLEAL 317
I +Y ++ G++ EV RLWD K K N Y T+L +L
Sbjct: 262 --------------------IEMYGNVAGSEKEVYRLWDEYKKETKVNDN-GYRTVLSSL 300
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+KL + AEK+ +EW+ G D IP+ ++ Y G+ N + +++ + +K
Sbjct: 301 LKLDNVQGAEKIYEEWKPEGPKLDMSIPSLLLSRYYAEGMEINIDQMVKSIRKK 354
>gi|115487560|ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|77553759|gb|ABA96555.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|125578643|gb|EAZ19789.1| hypothetical protein OsJ_35368 [Oryza sativa Japonica Group]
gi|215767656|dbj|BAG99884.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 611
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 215/469 (45%), Gaps = 12/469 (2%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
I K+ + + L +P + L W+ +GN + EL ++ LR+RK + +AL++ +
Sbjct: 139 IKKSQSTLLKALLESPRVDVAGALKKWLNDGNTLDRSELFYVLLILRRRKLYIKALQLLE 198
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQ 146
++ + D+A ++DL+ + H AE Y N+ + Y LL V
Sbjct: 199 YVEESKLIDLGERDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIAN 258
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
KA F KMK++G +S + N ++ LY + + +K+ DVLT M+ +N+ P F+Y++
Sbjct: 259 VKKAEQVFNKMKDLGFPVSVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKL 317
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
+++ GA D+E ME +++ M++ I D A+ A YI +K+ +L++
Sbjct: 318 LVDTKGAARDIEDMEKVIQAMQAD-GIEPDLLFQATIARHYIFGGYREKSEAILEQMVGD 376
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YITMLEALMKLGEHEE 325
++ F++ LYA LG +V R+W + C+ D ++ +EA KLG+ E+
Sbjct: 377 DINENRSACKFVLPLYAFLGKNDDVERIWKV----CEANARLDECMSAIEAFGKLGDVEK 432
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
AE++ + + ++ NA++ Y N L + + + + + G P + +
Sbjct: 433 AEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPYTLDSLVK 492
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
Y DAG+ E+ + L KP +L +G V + E + +R
Sbjct: 493 LYSDAGEVEKA----DSILHKLSYKNKIKPMYTTYLMLLDSYSKKGDVHNAEKLFSKVRQ 548
Query: 446 VIPMNR-QMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCT 493
+ R + Y ++A + + MKAD I + +L T
Sbjct: 549 MGYTGRIRQYQLLLEAYLNAKTPPYGFKERMKADDIFPNRAVASLLAAT 597
>gi|115482780|ref|NP_001064983.1| Os10g0501000 [Oryza sativa Japonica Group]
gi|113639592|dbj|BAF26897.1| Os10g0501000, partial [Oryza sativa Japonica Group]
Length = 451
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/468 (25%), Positives = 208/468 (44%), Gaps = 84/468 (17%)
Query: 31 TLYSIISPLGNPGTRIEPELDNW-VKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
+L+ ++ +P + P L+ W + V E+Q II+ L +R+RFSQAL++S WM
Sbjct: 55 SLFRRVAAAADPRLPLSPVLEQWCLAEERHVAKPEVQSIIKYLCRRRRFSQALQLSMWMT 114
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
+ +P D A +L+LI +V+G A YF ++ D K Q YG+LL CY +K
Sbjct: 115 ERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEK 174
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A F KM+ MG+A S+ YN +M LY + GQ E+V + M+ I PD + +
Sbjct: 175 AEELFEKMRGMGMA-SSYAYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVA 233
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVL--KKAEERL 267
+ L ++ ++++ +++ ++ S + + ++ K +D++ +KA E
Sbjct: 234 VLRKKKTLVAAYVVAEDIKAIENVLEKANSCNSM--YMCRIGVLLKMNDMVGAEKAYEEW 291
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAE 327
E K + LI+L +++A K G ++AE
Sbjct: 292 ESKHVYHDSRLINL-------------------------------LVDAYCKEGLMDKAE 320
Query: 328 KVLKEWELSGNSYDTRIPNA-----VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
++ ++ G R+P A + GY G V A DL +K A+ N W
Sbjct: 321 ALVDQFIKKG-----RMPFANTCYKLAGGYFKVGQVSKA----ADLTKKALASASNEWI- 370
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAA 442
PD + L+ ++ +V+ E ++
Sbjct: 371 --------------------------------PDLTNVLMSLNYFAEQKNVEAAEEMMSL 398
Query: 443 LRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
L+ ++ R +YH +K + GK V +LL MK DG++ DEET++IL
Sbjct: 399 LQRLVTPTRDIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEETEKIL 446
>gi|297834428|ref|XP_002885096.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
gi|297330936|gb|EFH61355.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 200/434 (46%), Gaps = 14/434 (3%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L+ WVK G + E+ I LRKRK ++ L++ +W+ F ++A QLDL+
Sbjct: 156 LEKWVKEGKDLSQAEVSLAIFHLRKRKYYAMCLQLWEWLGANTQFEFTEANYASQLDLVA 215
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+VH AE++ ++ + + Y LL V + +KA F KMKE+ S
Sbjct: 216 KVHSLQKAENFLKDIPESFRGEVVYRTLLANCVLKHHVNKAEDLFNKMKELKFPTSVFAC 275
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ LYS + +K+ DVL M+ +NI P +Y+ INS G D+ GME I+ M+
Sbjct: 276 NQLLLLYSMHDR-KKISDVLLLMERENIKPSRGTYQFLINSKGLAGDITGMEKIVETMKE 334
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ I +D A+ A +YI+A L ++A D++K+ E + Q+ L+ LYA +G+
Sbjct: 335 E-GIEVDPELQATLAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSD 393
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
V RL RY N I+ + A KL E EEAE V + + A++
Sbjct: 394 NVRRLSTFVDQNL-RYDN--CISAIRAWGKLKEVEEAEAVFERLVEKYKIFPMLPYFALM 450
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
Y N ++ + +++ + G P++W + Y AG + KA L +
Sbjct: 451 EIYTENKMLAKGKDLVKRMGNAGVTIGPSTWHALVKLYIKAG------EVGKAELILNRA 504
Query: 410 GKGWKPDPKVIT--SILSKLGDEGSVQDVE-AFVAALRTVIPMNRQMYHAFIKANIRNGK 466
K K P I+ +IL + G V + E F+ R Y + A I+
Sbjct: 505 TKDNKMRPMFISYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQLMQYETVLLAYIKAKT 564
Query: 467 GVDELLDSMKADGI 480
+ + MKAD +
Sbjct: 565 PAYGMFERMKADNV 578
>gi|22331104|ref|NP_188178.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273796|sp|Q9LRP6.1|PP234_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g15590, mitochondrial; Flags: Precursor
gi|11994226|dbj|BAB01348.1| DNA-binding protein [Arabidopsis thaliana]
gi|20856658|gb|AAM26678.1| AT3g15590/MQD17_5 [Arabidopsis thaliana]
gi|27363266|gb|AAO11552.1| At3g15590/MQD17_5 [Arabidopsis thaliana]
gi|332642175|gb|AEE75696.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 201/439 (45%), Gaps = 24/439 (5%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L+ WVK G + E+ I +LRKRK ++ L++ +W+ F ++A QLDL+
Sbjct: 161 LEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQLDLVA 220
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+VH AE + ++ + + Y LL V + +KA F KMKE+ S
Sbjct: 221 KVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVFAC 280
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ LYS + +K+ DVL M+ +NI P +Y INS G D+ GME I+ ++
Sbjct: 281 NQLLLLYSMHDR-KKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKE 339
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ I LD + A +YI+A L ++A D++K+ E + Q+ L+ LYA +G+
Sbjct: 340 E-GIELDPELQSILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSD 398
Query: 290 EVLRLWDLEKTACKRYINR-----DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
V RL R++++ + I+ ++A KL E EEAE V + +
Sbjct: 399 NVRRL--------SRFVDQNPRYDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMP 450
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
A++ Y N ++ +++ + G A P++W + Y AG + KA L
Sbjct: 451 YFALMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLYIKAG------EVGKAEL 504
Query: 405 SVYVEGKGWKPDPKVIT--SILSKLGDEGSVQDVE-AFVAALRTVIPMNRQMYHAFIKAN 461
+ K K P T +IL + G V + E F+ R Y + A
Sbjct: 505 ILNRATKDNKMRPMFTTYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQLMQYETVLLAY 564
Query: 462 IRNGKGVDELLDSMKADGI 480
I +++ MKAD +
Sbjct: 565 INAKTPAYGMIERMKADNV 583
>gi|449437992|ref|XP_004136774.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 604
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 190/400 (47%), Gaps = 12/400 (3%)
Query: 83 EVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYV 142
+ S+W+ G F D+A +LDLI +V G AESY + + + + LL YV
Sbjct: 189 QFSEWLEANGQLEFNQRDYASRLDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYV 248
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
KA F KMK++ ++ ++ ++ LY + + K+ D+L+ M+ +N+ P F
Sbjct: 249 AANNVKKAEEVFNKMKDLEFPMTPFAHDQMLILYKRIDK-RKLADILSLMEKENVKPSPF 307
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
+Y+I I++ G +D+ GME ++ M+++ I D ST + A Y+ L DKA +LK
Sbjct: 308 TYKILIDAKGLCNDISGMEQVVDSMKAE-GIKPDVSTLSLLAKHYVSNGLKDKAKVILKD 366
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-RDYITMLEALMKLG 321
EE + + L+ LY +L + EV RLW + C+ + + + + A KL
Sbjct: 367 MEENNSKGSRLPCRILLPLYGALQMEDEVRRLWKI----CEANPHMEESMAAIVAWGKLK 422
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+EAEK+ + + TR N ++ Y + ++ + ++ + E G +W
Sbjct: 423 NVQEAEKIFDRFVKTWKKPSTRHYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDELTWD 482
Query: 382 VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
V Y +AG+ E+ + A+ ++ K KP +++ + G V +VE A
Sbjct: 483 AVVKLYVEAGEVEKADSFLVKAV---LQNKK-KPMFTTYITLMDRYASRGDVPNVEKNFA 538
Query: 442 ALRTVIPMNR-QMYHAFIKANIRNGKGVDELLDSMKADGI 480
+R + + R + I+A + + + MKAD +
Sbjct: 539 MMRRLGYVGRLSQFQTLIQAYVNAKAPAYGMRERMKADNV 578
>gi|242043362|ref|XP_002459552.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
gi|241922929|gb|EER96073.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
Length = 421
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 185/394 (46%), Gaps = 19/394 (4%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY 131
LRK++ +++AL+ +W++R+ + F D+A LDL+ R HG +AE Y + + ++
Sbjct: 6 LRKQRMYNKALKFMEWIDRRKLLNFEERDYASHLDLVARNHGIEAAEKYIERVPEAFRSE 65
Query: 132 QTYGALL-NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
Y LL NC R KA F +++E+ + L+ N ++ LY + + KV D+L
Sbjct: 66 VLYETLLVNCVCRD-DAQKAEQVFNEIRELSLPLTVSACNQMLLLYKRVSR-NKVVDILK 123
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFY 247
M+ +NI P F+Y++ I+ G +D GME +L M+ +P D+ A FY
Sbjct: 124 LMENENIKPSLFTYKLMIDLKGRSNDTLGMESVLNLMKENGFEP----DFGIQTMVAKFY 179
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
I +L +KA +V A E + L+ LYA LG +V R+W+L C
Sbjct: 180 ISGDLAEKAEEV-TNAMEVYVNANRHAIRSLLDLYAILGRPDDVERIWNL----CTEPKL 234
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
D++ ++A KLG E AE+ + ++ NA++ Y N L+ + +E
Sbjct: 235 EDFLAAIKAWGKLGHIERAEETFDALVKTSPKLTSKYFNAMLYVYAENELLDKGKKFIER 294
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ G ++P +W V Y ++G+ + + +V + P + +L
Sbjct: 295 MSLDGCPSSPLTWDAVVKLYVNSGELAKADSFLA---NVTEDNPDRYPLFRSYVILLKAF 351
Query: 428 GDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKA 460
++G + + E L+ T P Y+ + A
Sbjct: 352 AEKGDIHNAEKIFNRLKQTSYPARTLPYNLLLAA 385
>gi|297829684|ref|XP_002882724.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328564|gb|EFH58983.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 518
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 158/342 (46%), Gaps = 39/342 (11%)
Query: 31 TLYSIISPLGNPGTRIEPELDNW---VKNGN-KVRVGELQRIIRDLRKRKRFSQALEVSD 86
TL S I + I L+ W K+GN ++ ++ I+ L KR+ QALEVS+
Sbjct: 40 TLLSRIESAADQKAAITTVLEEWRQQQKHGNHQLNPSLVKGIVEKLHDSKRYRQALEVSN 99
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQ 146
WM K IC P D AV+ LI V G AE +F ++ ++ K Y +LL Y + +
Sbjct: 100 WMIEKKICNHLPEDLAVRFHLIENVLGLEEAEKFFQSIPENLKGESIYTSLLKSYAKSGE 159
Query: 147 TD--KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSY 204
KA F KM+++G+ L YN ++ LYS KV ++L EMK N+ D+ +
Sbjct: 160 ISLRKAEYTFEKMRKLGMLLRPSPYNSMVSLYSSLRNRNKVDEILREMKENNLELDSPTV 219
Query: 205 RICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE 264
+ Y A D+ M+ L + + L+W T A Y
Sbjct: 220 NNALRVYAAVCDVATMDKFLADWNAI--TTLEWLTTLEMAKAY----------------- 260
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHE 324
LI LY G + +V R+WDL K K N + ++ +L+KL +
Sbjct: 261 ------------RLIRLYGEAGEREDVYRIWDLYKN-TKEKDNEGFRALIGSLLKLDDIN 307
Query: 325 EAEKV-LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
AEK+ EWE SG +D RIP ++ GY G+V+ A+ +L
Sbjct: 308 GAEKIYYDEWESSGLEFDLRIPTMLMSGYRAKGMVKKADKLL 349
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 89/156 (57%), Gaps = 4/156 (2%)
Query: 46 IEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM-NRKGICVFAPCDHAVQ 104
I P ++ VKN N+V+ +L+ +I++LR + S+ALE S WM ++G +F P D+A++
Sbjct: 362 INPFVEELVKNRNQVKPSDLRDLIKNLRDSNQLSKALEASTWMCEKRGFNLF-PEDYAIR 420
Query: 105 LDLIGRVHGFLSAESYF-SNLKDDEKTYQTYGALLNCYVRQRQT-DKALSHFRKMKEMGI 162
LI +V G AE +F S++ + K Y Y LL Y R +T KA F KM+E+G
Sbjct: 421 FHLIEKVLGLEEAEKFFESSIPKNMKDYSVYDTLLTSYTRSDKTLVKAEGVFEKMRELGF 480
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
+N I+ LY + + KV +L +MK NI+
Sbjct: 481 LSKLSPFNSIISLYIEQRKLSKVNKLLCDMKQNNIY 516
>gi|297596551|ref|NP_001042753.2| Os01g0280400 [Oryza sativa Japonica Group]
gi|255673117|dbj|BAF04667.2| Os01g0280400, partial [Oryza sativa Japonica Group]
Length = 426
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 193/421 (45%), Gaps = 12/421 (2%)
Query: 75 RKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTY 134
R+ L++ +++ + D+A ++DL+ +VHG AE Y N+ + Y
Sbjct: 2 RRYLLHFLQLLEYVEESKLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVY 61
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
LL V K F KMK++G ++ + N ++ LY + + +K+ DVLT M+
Sbjct: 62 RTLLANCVAIANVKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEK 120
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
+N+ P F+Y++ +++ GA D+E ME +++ M++ I D A+ A YI +
Sbjct: 121 ENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAMQAD-GIEPDLLIQATIARHYIFGGYRE 179
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY-ITM 313
KA +L++ E ++ F++ LYA LG K++V R+W + C+ D ++
Sbjct: 180 KAEAILEQIEGDDINENRSACKFVLPLYAFLGKKADVERIWKV----CEVNARLDECMSA 235
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
+EA KLG+ E+AE++ + + + NA++ Y N L + + + + + G
Sbjct: 236 IEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGC 295
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
P++ + Y DAG+ E+ + L KP +L +G V
Sbjct: 296 RLGPSTLDSLVKLYSDAGEVEKA----DSILHKLSYKNKIKPLYTTYLMLLDSYSKKGDV 351
Query: 434 QDVEAFVAALRTVIPMNR-QMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVC 492
+ E + +R + R + Y ++A + + MKAD I + +L
Sbjct: 352 HNAEKLFSKVRQMGYTGRIRQYQLLLEAYLNAKTPPYGFKERMKADDIFPNRAVASLLAA 411
Query: 493 T 493
T
Sbjct: 412 T 412
>gi|22165078|gb|AAM93695.1| putative leaf protein [Oryza sativa Japonica Group]
Length = 372
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 182/409 (44%), Gaps = 71/409 (17%)
Query: 83 EVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYV 142
++S WM + +P D A +L+LI +V+G A YF ++ D K Q YG+LL C
Sbjct: 29 QLSMWMTERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKC-- 86
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
Y++ EK ++ +M+ + ++
Sbjct: 87 ---------------------------------YAEANCVEKAEELFEKMRGMGM-ASSY 112
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
+Y + + Y +E + + + ME + IV D ST H + VL+K
Sbjct: 113 AYNVMMRLYLQNGQVERVHSMHQAME-ESGIVPDVST----THTLVA---------VLRK 158
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT-ACKRYINRDYITMLEALMKLG 321
+ L++ Y + + + LEK +C N Y+ + L+K+
Sbjct: 159 KKT------------LVAAYVVAEDIKAIENV--LEKANSC----NSMYMCRIGVLLKMN 200
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+ AEK +EWE +D+R+ N ++ YC GL+ AEA+++ ++KG+ N+
Sbjct: 201 DMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCY 260
Query: 382 VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
+A GYF G+ + K AL+ W PD + L+ ++ +V+ E ++
Sbjct: 261 KLAGGYFKVGQVSKAADLTKKALA--SASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMS 318
Query: 442 ALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
L+ ++ R +YH +K + GK V +LL MK DG++ DEET++IL
Sbjct: 319 LLQRLVTPTRDIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEETEKIL 367
>gi|78708864|gb|ABB47839.1| expressed protein [Oryza sativa Japonica Group]
gi|215701127|dbj|BAG92551.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 341
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 179/405 (44%), Gaps = 71/405 (17%)
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQ 146
WM + +P D A +L+LI +V+G A YF ++ D K Q YG+LL C
Sbjct: 2 WMTERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKC------ 55
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
Y++ EK ++ +M+ + +++Y +
Sbjct: 56 -----------------------------YAEANCVEKAEELFEKMRGMGM-ASSYAYNV 85
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
+ Y +E + + + ME + IV D ST H + VL+K +
Sbjct: 86 MMRLYLQNGQVERVHSMHQAME-ESGIVPDVST----THTLVA---------VLRKKKT- 130
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT-ACKRYINRDYITMLEALMKLGEHEE 325
L++ Y + + + LEK +C N Y+ + L+K+ +
Sbjct: 131 -----------LVAAYVVAEDIKAIENV--LEKANSC----NSMYMCRIGVLLKMNDMVG 173
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
AEK +EWE +D+R+ N ++ YC GL+ AEA+++ ++KG+ N+ +A
Sbjct: 174 AEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAG 233
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
GYF G+ + K AL+ W PD + L+ ++ +V+ E ++ L+
Sbjct: 234 GYFKVGQVSKAADLTKKALA--SASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQR 291
Query: 446 VIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
++ R +YH +K + GK V +LL MK DG++ DEET++IL
Sbjct: 292 LVTPTRDIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEETEKIL 336
>gi|449479164|ref|XP_004155523.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 201
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 5/174 (2%)
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
++LYA++GNK EV R+W+L KR+ N Y+ ++ +LMKL + + AE++LKEWE
Sbjct: 1 MTLYAAIGNKDEVYRVWNLYTNLQKRF-NSGYLCIISSLMKLDDIDGAERILKEWESGDT 59
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
S+D +IPN +I YC G V AEA + L+E GK +W +A+GY G T + +
Sbjct: 60 SFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLASGYHSNGLTNKAAE 119
Query: 399 CMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMN 450
+K A+S V WKP+ ++ + L L G+V+ E + L R + P+N
Sbjct: 120 TLKKAIS--VSPPRWKPNYDILAACLEYLKTNGNVELAEEIIGLLCKRDIFPLN 171
>gi|356557435|ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 208/460 (45%), Gaps = 23/460 (5%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA 102
G + +W+++G V G++ I LRK +AL+V +W+ R+ D++
Sbjct: 51 GESVGSAFRSWMRDGLPVHGGDIFHAINRLRKLNMNKRALQVMEWVIRERPYRPRELDYS 110
Query: 103 VQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
++ ++HG E FS + + ++ Y L+ + + +L + +KM+E+G
Sbjct: 111 YLVEFTTKLHGISHGEKLFSRIPVEFQSELLYNNLVIACLDKGVIKLSLEYMKKMRELGF 170
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+S L +N ++ L+S G+ + +P +LT+MKA + P +Y I + +LE +
Sbjct: 171 PISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLVK 230
Query: 223 ILREM---ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+ M + +P+ + +Y A + A L ++ E+ + + + L+
Sbjct: 231 VFGRMKVAQVEPNEI----SYCILAIAHAVARLYTATEAYVEAVEKSITGNNWSTLDVLL 286
Query: 280 SLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
LY LGN+ E+ R+W +++ R ++ Y+ +EA ++G+ AE++ E + +
Sbjct: 287 MLYGYLGNQKELERVWATIQELPSIR--SKSYMLAIEAFGRIGQLNRAEEIWLEMKSTKG 344
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
N+++ YC +G + A + +++ G ++ +A G +G E+ +
Sbjct: 345 LKSVEQFNSMMSVYCKHGFIDRAAKLYKNMKASGCKPNAITYHQLALGCLKSGMAEQALK 404
Query: 399 CMKAALSVYVEGK-----GWKPDPKVITSILSKLGDEGSVQDV-EAFVAA--LRTVIPMN 450
+ L + + + W I I ++ GD G+V+ + E F A R N
Sbjct: 405 TLDLGLRLTISKRVRNSTPWLETTLSIVEIFAEKGDVGNVERLFEEFHKAKYCRYTFVYN 464
Query: 451 RQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ A++KA I N LL M G D ET +L
Sbjct: 465 -TLIKAYVKAKIYN----PNLLKRMILGGARPDAETYSLL 499
>gi|302805546|ref|XP_002984524.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
gi|300147912|gb|EFJ14574.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
Length = 547
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 207/470 (44%), Gaps = 35/470 (7%)
Query: 46 IEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQL 105
+ P ++ W+ GN++ L + LR+RKRF AL +SDW+ K + P DH L
Sbjct: 75 VVPIVEEWMAEGNEITRYGLIIVRHKLRRRKRFHHALRISDWIAYKKRVI--PYDHKEAL 132
Query: 106 ---DLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
DL+ RV A F NL D K+ + Y LL+ YVR A S + +K G+
Sbjct: 133 NHIDLVSRV-SVTRAREMFDNLPADWKSREGYTVLLSMYVRHSMAADAESIYTTLKRWGL 191
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
S N ++ LY K + KV +++ + + + S+ I + + ME
Sbjct: 192 R-SISPINMMLTLYQKHQVFWKVAELIRDAEEAGQSLNMCSFNILLPMTFRAGGVAEMES 250
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE----QKDGIGYNFL 278
++ MES+ LD TY A Y +A ++DKA ++L E+ +E + YN +
Sbjct: 251 LVEMMESKN--FLDEHTYCMLASSYGRAGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVI 308
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
I +Y +G+ V R+WD+ T+ DYI M+ + K+G E+AE
Sbjct: 309 IVIYGFIGDVEGVKRIWDI--TSRMDPTAEDYICMIRSSAKVGLFEQAESGFLALAAQRK 366
Query: 339 SYDTRIPNAVIIGYCNNG-LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG- 396
+ T + N V++ C G V AE++L + + G P ++ + A + +R
Sbjct: 367 MHIT-VCN-VMLQVCQAGNFVLRAESLLRKIHQMGFKPDPATYHHLIAIHLKNDNIQRAL 424
Query: 397 --FQCMKAALSVYVE-------------GKGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
FQ + V E K KP ++ L + G V E
Sbjct: 425 DLFQLERQVFRVPFELSPQERKFMSTEPRKDIKPWVGTCRMMMLALAERGEVVACETLFR 484
Query: 442 ALRT-VIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
R + ++++A ++A + V ++ ++ADG++ DEET IL
Sbjct: 485 NWRLEKWKTDVRLFNALLRAYEVAREPVAGFMERLEADGVEADEETIGIL 534
>gi|302782563|ref|XP_002973055.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
gi|300159656|gb|EFJ26276.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
Length = 547
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 206/470 (43%), Gaps = 35/470 (7%)
Query: 46 IEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQL 105
+ P ++ W+ GN++ L + LR+RKRF AL +SDW+ K + P DH L
Sbjct: 75 VVPIVEEWMAEGNEITRYGLIIVRHKLRRRKRFHHALRISDWIAYKKRVI--PYDHKEAL 132
Query: 106 ---DLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
DL+ RV A F NL D K+ + Y LL+ YVR A S + +K G+
Sbjct: 133 NHIDLVSRV-SVTRAREMFDNLPADWKSREAYTVLLSMYVRHSMAADAESIYTTLKRWGL 191
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
S N ++ LY K + KV +++ + + + S+ I + + ME
Sbjct: 192 R-SISPINMMLTLYQKHQVFWKVAELIRDAEEAGQSLNMCSFNILLPMTFRAGGVAEMES 250
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE----QKDGIGYNFL 278
++ MES+ LD TY A Y +A ++DKA ++L E+ +E + YN +
Sbjct: 251 LVEMMESKN--FLDEHTYCMLASSYGRAGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVI 308
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
I +Y +G+ V R+WD+ T+ DYI M+ + K+G E AE
Sbjct: 309 IVIYGFIGDVEGVKRIWDI--TSRMDPTAEDYICMIRSSAKVGLFELAESGFLALAAQRK 366
Query: 339 SYDTRIPNAVIIGYCNNG-LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG- 396
+ T + N V++ C G V AE++L + + G P ++ + A + +R
Sbjct: 367 MHIT-VCN-VMLQVCQAGNFVLRAESLLRKIHQMGFKPDPATYHHLIAIHLKNDNIQRAL 424
Query: 397 --FQCMKAALSVYVE-------------GKGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
FQ + V E K KP ++ L + G V E
Sbjct: 425 DLFQLERQVFRVPFELSPQERKFMSTEPRKDIKPWVGTCRMVMLALAERGEVVACETLFR 484
Query: 442 ALRT-VIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
R + ++++A ++A + V ++ ++ADG++ DEET IL
Sbjct: 485 NWRLEKWKTDVRLFNALLRAYEVAREPVAGFMERLEADGVEADEETIAIL 534
>gi|118482495|gb|ABK93170.1| unknown [Populus trichocarpa]
Length = 96
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIK 459
MKAAL +Y E K WKP+ KVIT ILS LGDEGS +D EAFV++L+ VIPMNR+MYHA +K
Sbjct: 1 MKAALCLYEENKEWKPNQKVITGILSWLGDEGSAEDAEAFVSSLKNVIPMNREMYHAVLK 60
Query: 460 ANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
A+IR GK V LLD MK I EDEETK+IL
Sbjct: 61 AHIRAGKEVHGLLDGMKTCKIKEDEETKKIL 91
>gi|356547249|ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 202/454 (44%), Gaps = 11/454 (2%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA 102
G + +W+++G V ++ + LRK +AL+V +W+ R+ D++
Sbjct: 51 GESVGAAFCSWMRDGLPVHGVDVFHAVNRLRKLNMNKRALQVMEWVIRERPYRPKELDYS 110
Query: 103 VQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
++ ++HG E FS + + + Y L+ + + +L + +KM+E+G
Sbjct: 111 YLVEFTTKLHGISHGEKLFSRIPVEFQNELLYNNLVIACLDKGVIKLSLEYMKKMRELGF 170
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+S L +N ++ L+S G+ + +P +LT+MKA + P +Y I + +LE +
Sbjct: 171 LISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLVK 230
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
M+ + + +Y A + A L ++ E+ + + + L+ LY
Sbjct: 231 FFSRMKV-AQVAPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNNWSTLDVLLMLY 289
Query: 283 ASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
LGN+ E+ R+W + + R ++ Y+ +EA ++G+ +AE++ E E +
Sbjct: 290 GYLGNQKELERVWATIRELPSVR--SKSYMLAIEAFGRIGQLNQAEELWLEMESTKGLKS 347
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
N+++ YC +G + A + +++ G ++ +A G +G E+G + +
Sbjct: 348 VEQFNSMMSVYCKHGFIGKAAKLYKNMKASGCKPNAITYRQLALGCLKSGMAEQGLKTLD 407
Query: 402 AALSVYVEGK-----GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHA 456
L + + + W I I ++ GD G+V+ + F ++ +Y+
Sbjct: 408 LGLRLTISKRVRNSIPWLETTLSIVEIFAEKGDMGNVERL--FEEFHKSKYCRYTFVYNT 465
Query: 457 FIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
IKA ++ LL M G D ET +L
Sbjct: 466 LIKAYVKAKIYDPNLLKRMILGGARPDAETYSLL 499
>gi|255584236|ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527393|gb|EEF29534.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 200/459 (43%), Gaps = 14/459 (3%)
Query: 38 PLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFA 97
P G P I +W++ G + G++ I LRK K +ALEV +W+ R+
Sbjct: 63 PRGEP---IGLAFQSWMREGFPIHRGDVFHAINRLRKLKLNKRALEVMEWVIRERPYRPK 119
Query: 98 PCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKM 157
D++ L+ ++HG E F+ + + + Y L+ + + +L + +KM
Sbjct: 120 ELDYSYLLEFTTKLHGISHGEKLFTRIPTEFQNELLYNNLVIACLEKGVIRLSLEYMKKM 179
Query: 158 KEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL 217
+E+G +S L +N ++ L+S G+ + +P +LT+MKA + +Y I + ++
Sbjct: 180 RELGHPISHLIFNRLIILHSSPGRRKMIPKILTQMKADKVVRHVSTYNILMKIEANEHNV 239
Query: 218 EGMEIILREM---ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
EG+ + EM E +P+ V ++ A + A L A ++ E+ +
Sbjct: 240 EGLIKVFGEMKRLEVEPNEV----SFCILAIAHAVARLYTVAEAYVEAVEKSYTGDNWST 295
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
+ LI LY L ++ R+W K ++ YI +EA ++G+ AE++ E +
Sbjct: 296 LDVLIILYGYLRKGKKLDRIWGTVK-ELPHVRSKSYILAIEAFGRIGQLGRAEELWLEMK 354
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
T N+++ YC GLV+ A I ++ G ++ +A G A E
Sbjct: 355 SLKGLKSTEQFNSMLSIYCKCGLVKKATDIFREMDRNGCKPNAITFRHLALGCLKAELVE 414
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKLGDEGSVQDVEAFVAAL-RTVIPMNR 451
+ ++ + K P + T SI+ ++G V + E F L +
Sbjct: 415 EALKTLEMGMDFTTSNKIKNSIPWLETTFSIVEIFAEKGDVANAEKFFEELHKAKYARYT 474
Query: 452 QMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+Y+ IKA ++ V LL M G D ET ++
Sbjct: 475 FVYNTLIKAYVKAKVYVPYLLRRMILGGARPDAETYSLI 513
>gi|225434953|ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 201/456 (44%), Gaps = 8/456 (1%)
Query: 38 PLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFA 97
P G P + +W+ G + G + I LRK K +ALEV +W+ R+
Sbjct: 92 PRGEP---VGLAFQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRPK 148
Query: 98 PCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKM 157
D++ L+ ++HG E FS++ + + Y L+ + + +L++ +KM
Sbjct: 149 ELDYSYLLEFTTKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKM 208
Query: 158 KEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL 217
+E+G +S L +N ++ L+S + + +P +LT+MKA + +Y I + ++
Sbjct: 209 RELGHPISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNI 268
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
EG+ + EM+ Q + + +Y A + A L A ++ E+ + + +
Sbjct: 269 EGLVKVFGEMKQQ-QVEPNEVSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNNWSTLDV 327
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
LI LY LG +++ R W + + ++ Y+ +EA ++G+ AE++ E +
Sbjct: 328 LIILYGYLGKPTDLERTWGIVQ-ELPHVRSKSYMLAIEAFGRIGQLNRAEELWLEIKSKK 386
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
T N++I Y +G + A + ++ G ++ +A G AG E
Sbjct: 387 ELKSTEQFNSMISVYSKHGFIDKASGLFREMEMNGCKANAITYRNLALGCLKAGLLEEAL 446
Query: 398 QCMKAALSVYVEGKGWKPDPKVIT--SILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMY 454
+ ++ + + + K P + T SI+ + G V++ E L+T +Y
Sbjct: 447 KTLELGKGLTISTRIRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFVY 506
Query: 455 HAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ IKA ++ LL M G D ET ++
Sbjct: 507 NTLIKAYVKAKVYDPNLLRRMILGGARPDAETYSLM 542
>gi|449523950|ref|XP_004168986.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 191
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 104/211 (49%), Gaps = 38/211 (18%)
Query: 18 FSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKR 77
F FY T + K +LY ISP+G+P + P LD WV V+ EL+ II++LR KR
Sbjct: 19 FVNFYST--VVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKR 76
Query: 78 FSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGAL 137
F ALEV D YF+N+ K Q + AL
Sbjct: 77 FKHALEVED---------------------------------YFNNMPSQLKRCQVHIAL 103
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI 197
LNCY ++ DKA + +K+KEMG A ++L YN M LY + G++E++ L E +
Sbjct: 104 LNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLDSPLKETDVDH- 162
Query: 198 FPDNFSYRICINSYGARSDLEGMEIILREME 228
D F+Y +++Y D G+E I+ +ME
Sbjct: 163 --DQFTYTTRLSAYATAFDFTGIEKIMEQME 191
>gi|302788498|ref|XP_002976018.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
gi|300156294|gb|EFJ22923.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
Length = 603
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 196/450 (43%), Gaps = 31/450 (6%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
LD W + G + V + +I L+ R + ALE+ +W+ + + QL++
Sbjct: 169 LDKWKEEGKDLTVSMIVTVINRLKNSNRMAHALEMIEWVVDEPDYKDFKLARSFQLEITA 228
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG-IALSTLT 168
R G +AE F L +EKT Y ALL YV KA F +M + G ++ S
Sbjct: 229 RSKGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAGFLSQSPFA 288
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
N +M LY G K ++L + K + P+ F+Y + ++ D+EGME I EM+
Sbjct: 289 LNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGMEKIFEEMK 348
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
P+ D ++Y + Y+KA L DKA L + E ++ + +++ Y LG
Sbjct: 349 LNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRMEVGPFRRTKATFEYMMLAYGQLGLI 408
Query: 289 SEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK---EWELSGNSYDTRIP 345
S+V R+W K N ++ A+ GE + + + K +W+ S + D +
Sbjct: 409 SDVERMWQKCKMVPGDGFN-SFLAFQRAMALAGEVQRVDSMFKHMDKWKRS-KTVDLKRH 466
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
N +++ Y G+ + + + + E T W + + KAA +
Sbjct: 467 NNLLLAYYKKGMKCEIKELEKKMNEMDLRVTLVDW------------EKEPIKMSKAAKA 514
Query: 406 VYVEGKGWKPDPKVITSILSKLGDEGSVQ--DVEAFVAALRTVIPMNRQ---MYHAFIKA 460
V + K + ++ G E +V+ DV+A +A N +++ +KA
Sbjct: 515 VVRKDKE--------KEMAARKGLEEAVEKADVKAAESAFEKCKAGNMAKVGVWNKLLKA 566
Query: 461 NIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ L MKA+G++ +EET +L
Sbjct: 567 YVNAQVPAYGFLQRMKAEGVEANEETHSLL 596
>gi|115471209|ref|NP_001059203.1| Os07g0222700 [Oryza sativa Japonica Group]
gi|34394024|dbj|BAC84055.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113610739|dbj|BAF21117.1| Os07g0222700 [Oryza sativa Japonica Group]
gi|117380751|gb|ABK34463.1| DNA-binding protein [Oryza sativa Japonica Group]
Length = 411
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 170/357 (47%), Gaps = 15/357 (4%)
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
+E Y+T ++NC V KA F+++K++ + L+ N ++ LY + KV
Sbjct: 45 NEVLYETL--IVNC-VLAGDIQKAEEVFKEIKDLCLRLTVTLCNQMILLYKRIAP-GKVA 100
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
VL M+ +N+ P F+YR+ I+ G +DL G+E++L EM++ I ST A F
Sbjct: 101 SVLMLMEKENVKPSAFTYRLLIDLKGRSNDLAGIEVVLNEMKAY-GIEPSTSTQTMVARF 159
Query: 247 YIKANLIDKASDVLKKAEERLE-QKDGIGY-NFLISLYASLGNKSEVLRLWDLEKTACKR 304
YI L +KA V+K+ E +L KDG L+ LYA+L ++V R+W++ C
Sbjct: 160 YIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIKSLLHLYAALNKPNDVARIWEM----CTE 215
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+ D+++ ++A +LG E+AE+ + + ++ NA++ Y N L+ +
Sbjct: 216 PMLEDFLSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQF 275
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+E + G P +W + Y ++G+ E+ + L+V E KP ++
Sbjct: 276 VERMCRDGCPNGPLTWDALINLYVNSGEVEKADSFL---LNVAEENPDRKPLFTSYFFLM 332
Query: 425 SKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK-GVDELLDSMKADGI 480
G + + E L+ V R +++A + N K L+ M+ D +
Sbjct: 333 KGYAKRGDIHNTEKIFDRLKNVGYAPRPLHYAVLLEAYVNAKVPAHGFLERMRGDNV 389
>gi|449450908|ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 196/443 (44%), Gaps = 6/443 (1%)
Query: 52 NWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRV 111
+W+ +G + G++ I LRK +R +ALEV +W+ R+ D++ L+ +
Sbjct: 79 SWMGDGFPIHRGDIFHAINRLRKLERNKRALEVMEWVIREKPYRINELDYSYLLEFTIKH 138
Query: 112 HGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
HG E FSN+ + + + L+ + + +L++ RKM+E+G ++S L +N
Sbjct: 139 HGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVGHSISHLVFNR 198
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP 231
++ L+S + + +P +L++MKA + +Y I + ++EG+ + +M +
Sbjct: 199 LIILHSSFRRRKIIPKILSQMKADKVPLHVSTYNILMKIEANEHNIEGLMRVFSDMR-RA 257
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
+ + +Y A + A L ++ E+ + + Y+ LI LY L + E+
Sbjct: 258 KVEPNEVSYCIVATAHAVAKLYTVVEAYVEALEKSIAGNNWSTYDVLIILYGYLNKEKEL 317
Query: 292 LRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
R W + + ++ +I +EA ++G AE++ E + T N+++
Sbjct: 318 ERTWGIIQ-GFPHIPSKSFILAIEAFGRIGLLSRAEELWLEMKTKRGIKATDQFNSILSV 376
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
YC +GL++ A I + G ++ +A G AG E + + + K
Sbjct: 377 YCRHGLIKKATEIFRKIEANGCKPNAITFRHLAFGCLKAGLVEEALKTLDLGSNTTSSTK 436
Query: 412 GWK---PDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ-MYHAFIKANIRNGKG 467
+ P + S++ L + G +++ E L+ +Y+ IKA ++
Sbjct: 437 IVRKSTPWLETTLSMIEILAERGDIENTEKLFKELKEAKYTRYTFVYNTLIKAYVKAKIH 496
Query: 468 VDELLDSMKADGIDEDEETKEIL 490
LL M G D ET ++
Sbjct: 497 NPNLLRRMIVGGARPDSETYSLI 519
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 195/435 (44%), Gaps = 14/435 (3%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L + ++ ALEV M KG C + +D +G+ F A + ++D+
Sbjct: 50 LINSLGRAGKWEAALEVVAEMQAKG-CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDN 108
Query: 128 E--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+TY L++ + + +A + F +M+E G T TYN ++ K G+ +K
Sbjct: 109 GCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKA 168
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
++L EM+ PD +Y I G + + +EM+ + D T+ +
Sbjct: 169 MELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKP-DSITFTALMD 227
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKR 304
KA +D A ++L + +ER + + YN LI+ + +G+ E L D +++ CK
Sbjct: 228 ALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKP 287
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+ Y ++ L+K + +EA +VLK+ E G DT N +I G GL+ +A +
Sbjct: 288 DV-VTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRL 346
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+ + KG +++ + A + E L +E G +PD SI+
Sbjct: 347 FDRMKSKGCNPDVVTYSTLITALGKAARVESA-----CVLFEEMESVGIQPDLFTYCSII 401
Query: 425 SKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGID 481
+ LG G V D + + +R + + Y+AF+ + R G K ++ + MK G+
Sbjct: 402 TVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLL 461
Query: 482 EDEETKEILVCTMEK 496
D T + L+ + K
Sbjct: 462 PDVATYDALLLGLSK 476
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 170/410 (41%), Gaps = 17/410 (4%)
Query: 31 TLYSIISPLGNPGTRIEP--ELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM 88
T S+I+ LG G ++ + G K ++ L K R ALE+ D M
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQ 146
+G+ +A+ + G+V + A + +K + + TY L+ ++ Q
Sbjct: 246 KERGVKPGVVTYNAL-IAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQ 304
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
D+A +KM++ G T+TYN ++ K G + MK+K PD +Y
Sbjct: 305 LDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYST 364
Query: 207 CINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
I + G + +E ++ EMES QP D TY S KA +D A + +
Sbjct: 365 LITALGKAARVESACVLFEEMESVGIQP----DLFTYCSIITVLGKAGQVDDADRLFSEM 420
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEH 323
+ D I YN ++ G E ++++ K + Y +L L K E
Sbjct: 421 RGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEV 480
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
++A +LKE G ++D+ + + + G V A +L+ KG +S+ +
Sbjct: 481 DDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNAL 540
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
AG+ F ++ ++ +G KPD +S++S LG G +
Sbjct: 541 IDALAKAGRVSEAFNTLED-----LKEQGGKPDIVSYSSLISALGQTGQI 585
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 150/355 (42%), Gaps = 6/355 (1%)
Query: 31 TLYSIISPLGNPGTRIEPE--LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM 88
T ++I+ G G +E LD +NG K V +I L K + +A +V M
Sbjct: 256 TYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKM 315
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQ 146
++G C + ++ +G+ A F +K TY L+ + +
Sbjct: 316 EKEG-CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAAR 374
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
+ A F +M+ +GI TY I+ + K GQ + + +EM+ K + PD +Y
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
+NS G + I +M+ + ++ D +TY + K +D A +LK+ E+
Sbjct: 435 FLNSLGRGGRFKEARKIFEDMK-ESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQ 493
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
D + ++ + + S GN E L + Y +++AL K G EA
Sbjct: 494 GCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEA 553
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
L++ + G D +++I G + A +LE++ ++G +P S++
Sbjct: 554 FNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYS 608
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 157/370 (42%), Gaps = 15/370 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +LLN + Q ++A F ++K ++Y+ ++ + G++E +V+ EM
Sbjct: 11 TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+AK P+ ++Y ++ G + +L EM V D TY KA
Sbjct: 71 QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDN-GCVPDVRTYNCLISTLGKAGR 129
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYI 311
+ +A + + ER D YN LI +G + + L ++E+ C + Y
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDV-MTYS 188
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+++ L K GE +A K+ +E + G D+ A++ G V +A +L+++ E+
Sbjct: 189 SLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKER 248
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G ++ + AG+ G + + ++ G KPD + +++ L
Sbjct: 249 GVKPGVVTYNALIAGFGKVGDLVEAYNLLDE-----MKRNGCKPDVVTYSCLITGLIKAS 303
Query: 432 SVQDVEAFVAAL-RTVIPMNRQMYHAFI----KANIRNGKGVDELLDSMKADGIDEDEET 486
+ + + + + P + Y+ I KA + N G L D MK+ G + D T
Sbjct: 304 QLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAG--RLFDRMKSKGCNPDVVT 361
Query: 487 KEILVCTMEK 496
L+ + K
Sbjct: 362 YSTLITALGK 371
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 131/337 (38%), Gaps = 48/337 (14%)
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIIL 224
+ +TYN ++ +K GQ E+ + E+KA PD SY INS G E ++
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67
Query: 225 REMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
EM+++ W+ YN L+
Sbjct: 68 AEMQAKGCKPNLWT------------------------------------YNTLVDCLGK 91
Query: 285 LGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
G E LRL ++ C + R Y ++ L K G EA + E G DT
Sbjct: 92 AGQFDEALRLLAEMRDNGCVPDV-RTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTF 150
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAA 403
N++I G G Q A +LE++ G +++ + G G+T + F+ +
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQE- 209
Query: 404 LSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKAN 461
++ +G KPD T+++ LG G V D + + R V P Y+A I
Sbjct: 210 ----MKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKP-GVVTYNALIAGF 264
Query: 462 IRNGKGVD--ELLDSMKADGIDEDEETKEILVCTMEK 496
+ G V+ LLD MK +G D T L+ + K
Sbjct: 265 GKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK 301
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 14/261 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGIC--VFAPCDHAVQLDLIGRVHGFLSAESYFSNLK 125
+I L K R A + + M GI +F C L G+V A+ FS ++
Sbjct: 365 LITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVD---DADRLFSEMR 421
Query: 126 DDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ TY A LN R + +A F MKE G+ TY+ ++ SKT + +
Sbjct: 422 GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVD 481
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+L E+ + D+ + C+ + +++ +L+ S+ + S+Y +
Sbjct: 482 DACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSK-GLWPGASSYNAL 540
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
KA + +A + L+ +E+ + D + Y+ LIS +LG ++ ++L + K
Sbjct: 541 IDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLIS---ALGQTGQIDTAFELLEEMSK 597
Query: 304 RYIN---RDYITMLEALMKLG 321
R + R Y ++ L G
Sbjct: 598 RGLKLSPRSYSNLVRKLQDWG 618
>gi|357139769|ref|XP_003571450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Brachypodium distachyon]
Length = 517
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 194/444 (43%), Gaps = 5/444 (1%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+ W+ G V G + I LR+R+ L+V +W+ R+ + D++ L+
Sbjct: 68 IRGWMAAGRAVHRGHVFHAINRLRRRRLHRTGLQVMEWVIRERPYKLSELDYSYLLEFTA 127
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+VHG AES F + + + Y L+ + + + RKM+E+ + +S Y
Sbjct: 128 KVHGISEAESLFLRIPQEYRNELLYNNLVMACLELSLIKLSYGYMRKMRELSLPISPYVY 187
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ L+S G+ + +P +L +MKA + P +Y I + +++G+ + +M+
Sbjct: 188 NRLIILHSSEGRRKTIPKILAQMKASKVTPHTSTYNILLKIQANEHNIDGVARVFNDMK- 246
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + + TY A + A L + ++ + + + L+ LY LG +
Sbjct: 247 RAKVEPNEITYGILAISHAVARLYTVSQTYIEAIKNSMTGTNWSTQEILLILYGYLGKEK 306
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
E+ W L + ++ + +EA K+G E+AE++ E + + T N+++
Sbjct: 307 ELKMTWKLMQV-LPHIRSKSFTLAIEAFGKIGSIEQAEEIWGEIKSARKLRLTEQFNSML 365
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
YC +G+V A A+ +++ G ++ +A G AG ++ M V
Sbjct: 366 SVYCRHGVVDKASAVFKEMRASGCQPNAITYRHLALGCLKAGLVKQALNTMDMGKKEVVT 425
Query: 410 GKGWKPDPKVITS--ILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGK 466
K P + T+ +L + G +++ + A L + N +Y+ +KA ++
Sbjct: 426 RKVRNSTPWLETTHMLLENFAEIGDLENAKIVYAELNESKYCRNSFVYNTLLKAYVKAKV 485
Query: 467 GVDELLDSMKADGIDEDEETKEIL 490
+ +M G D ET +L
Sbjct: 486 YEPNFVRTMILRGAMPDAETHSLL 509
>gi|297729251|ref|NP_001176989.1| Os12g0531500 [Oryza sativa Japonica Group]
gi|255670362|dbj|BAH95717.1| Os12g0531500 [Oryza sativa Japonica Group]
Length = 352
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 116/214 (54%), Gaps = 9/214 (4%)
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
SL ++ + R+W + +++ + +Y ML +L + G+ EAE EWE + + D+
Sbjct: 132 TSLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESASGTRDS 191
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA 402
RIPN ++ Y NG+++ AE L+ +V+KG + ++W + GY G+ ++ +C+K
Sbjct: 192 RIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKVLECLKK 251
Query: 403 ALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANI 462
ALS + W P+P++ T+I S++ ++G ++ E + R + ++Y++ ++
Sbjct: 252 ALSCL---EKWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYVTTEIYNSVLRTYA 308
Query: 463 RNGKG---VDELLDSMKADGIDEDEETKEILVCT 493
+ VDE +D D + D+ET+ +L T
Sbjct: 309 KAELMPLIVDERMDQ---DKVSMDDETRSLLRLT 339
>gi|186478941|ref|NP_174121.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332192779|gb|AEE30900.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 388
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 143/281 (50%), Gaps = 5/281 (1%)
Query: 18 FSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKR 77
F+ + ++N+T+ +S I LG ++ P LD W+K G + L+ +I L + +R
Sbjct: 22 FAGTLTSPKLNETS-HSRIMALGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQR 80
Query: 78 FSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGAL 137
F+ AL+VS+W+ ++GI + D A +L L+ G AE +F ++ ++ + + L
Sbjct: 81 FNHALQVSEWITKRGIFDLSTEDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTL 140
Query: 138 LNCYVRQRQT-DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L+ Y ++T +A + ++ M+ + L Y ++ LY+ G+ + ++L +MK
Sbjct: 141 LSLYTISKKTRHEAEATYQTMRVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENG 200
Query: 197 IFPD-NFSYRICINSYGARSDLEGMEIILREME-SQPHIVLDWSTYASAAHFYIKANLID 254
+ D N + + +Y + D+E ME+ L +E +P L W T S A Y+K
Sbjct: 201 VEHDKNLTANNVLKAYASLPDVEAMEMFLMGLEVEEPRFSLAWQTGISIAKAYLKGGSSR 260
Query: 255 KASDVLKKAEERLEQKDGIGYN-FLISLYASLGNKSEVLRL 294
KA ++L++ E ++ K N L+ +Y G K + RL
Sbjct: 261 KAVEMLRRTELVVDTKSKDSANKVLMMMYWDAGAKQDASRL 301
>gi|413917311|gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]
Length = 514
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 196/444 (44%), Gaps = 5/444 (1%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+ W+ +G V G + I LR+ + AL+V +W+ R+ + D++ L+
Sbjct: 65 MRGWMADGRAVHRGHVFHAINRLRRHRLHRTALQVMEWIVRERPYKLSELDYSYLLEFTA 124
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+VHG AES F + + + Y L+ + + ++ RKM+E+ + +S Y
Sbjct: 125 KVHGISEAESLFLRVPQECRKELLYNNLVMAALDLNHIKHSYAYMRKMRELSLPISPYVY 184
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ L+S G+ + + +L++MKA + P +Y I + +++G+ + M+
Sbjct: 185 NRLIILHSSPGRRKTISKILSQMKADRVVPHTSTYNILLKIQANEHNIDGLARVFNGMK- 243
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ I + TY A + A L ++ E + + L+ LY LG +
Sbjct: 244 RAKIEPNEITYGILAIAHAVARLYTVCHTYVEAIENSMTGTNWSTLEILLILYGYLGKEK 303
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
E+ R W++ + ++ + +EA K+G ++AEK+ + + T N+++
Sbjct: 304 ELKRTWEIMQD-LPHIRSKSFTLAIEAFGKVGSIDQAEKIWIHIKSTKKLSLTEQFNSML 362
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
YC +G+V A ++ +++ G ++ +A G +G + + V
Sbjct: 363 SVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCLKSGLVKEALNTIDMGKKEVVT 422
Query: 410 GKGWKPDPKVITS--ILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGK 466
K P + T+ +L + G +++ + + L + +N +Y+ +KA ++
Sbjct: 423 KKVRSSTPWLETTHLLLENFAEIGDLENAKRLYSELNESKYSLNSFVYNTLLKAYVKAKV 482
Query: 467 GVDELLDSMKADGIDEDEETKEIL 490
+L +M G D ET +L
Sbjct: 483 YEPDLSRTMILRGAMPDAETYSLL 506
>gi|224106481|ref|XP_002314181.1| predicted protein [Populus trichocarpa]
gi|222850589|gb|EEE88136.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 196/456 (42%), Gaps = 15/456 (3%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA 102
G + +W+ G + G++ I LRK + +ALEV +W+ R+ D++
Sbjct: 69 GESVGYAFQSWMGEGFPIHRGDVFHTINRLRKLRLNKRALEVMEWVVRERPYRLKELDYS 128
Query: 103 VQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
L+ + HG E F ++ + + Y L+ + + +L + +KM+E G
Sbjct: 129 YLLEFTTKHHGISHGEKLFLHVPSEFQNELLYNNLVISCLEKGVIRLSLDYMKKMREQGH 188
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+S L +N ++ L+S G + +P +L +M+A + P +Y I + +++G+
Sbjct: 189 PISYLIFNRLIILHSSPGSRKMIPKILAQMRADKVVPHVSTYNILMKIEANEHNIDGLVK 248
Query: 223 ILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+ +M+ +P+ V ++ A + A L A ++ E+ + + LI
Sbjct: 249 VFNDMKRFKVEPNEV----SFCILATAHAAARLYTVAEAYVEAVEKSCSGDNWSTLDVLI 304
Query: 280 SLYASLGNKSEVLRLWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
LY LG + E+ R W LE + ++ Y+ +EA K+G+ AE++ E +
Sbjct: 305 ILYGHLGKEKELERTWGIVLELPHVR---SKSYMLAIEAYGKIGQLSRAEELWLEMKSIH 361
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
T N+++ YC +GL++ A ++ G ++ +A G A E
Sbjct: 362 GLRSTEQFNSMLSVYCKHGLIKKATGNFREMEINGCKANSITFRHLALGCLKANLVEEAL 421
Query: 398 QCMKAA--LSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ-MY 454
+ ++ L+ K P + SI+ ++G V +VE L + ++
Sbjct: 422 KTLEMGKNLTTSNRVKNSTPWLETTLSIIELFAEKGDVVNVEKLFEELAKAKYIRHTFVF 481
Query: 455 HAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ IKA ++ LL M G D ET ++
Sbjct: 482 NILIKAYVKAKIYSPNLLRRMILGGARPDAETYSLI 517
>gi|302764000|ref|XP_002965421.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
gi|300166235|gb|EFJ32841.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
Length = 584
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 187/448 (41%), Gaps = 46/448 (10%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
LD W + G + V + +I L+ R + ALE+ +W +
Sbjct: 169 LDKWKEEGKDLTVSMIVTVINRLKNSNRMAHALEMIEW-------------------ITA 209
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG-IALSTLT 168
R G +AE F L +EKT Y ALL YV KA F +M + G ++ S
Sbjct: 210 RSKGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAGFLSQSPFA 269
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
N +M LY G K ++L + K + P+ F+Y + ++ D+EGME I EM+
Sbjct: 270 LNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGMEKIFEEMK 329
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
P+ D ++Y + Y+KA L DKA L + E ++ + +++ Y LG
Sbjct: 330 LNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRMEVGPFRRTKATFEYMMLAYGQLGLI 389
Query: 289 SEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK---EWELSGNSYDTRIP 345
S+V R+W K N ++ A+ GE + + + K +W+ S + D +
Sbjct: 390 SDVERMWQKCKMVPGDGFN-SFLAFQRAMALAGEVQRVDSMFKHMDKWKRS-KTVDLKRH 447
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
N +++ Y G+ + + + + E T W + + KAA +
Sbjct: 448 NNLLLAYYKKGMKCEIKELEKKMNEMDLRVTLVDW------------EKEPIKMSKAAKA 495
Query: 406 VYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ---MYHAFIKANI 462
V + D + T+ L + DV+A +A N +++ +KA +
Sbjct: 496 VV------RKDKEKETAARKGLEEAVEKADVKAAESAFEKCKAGNMAKVGVWNKLLKAYV 549
Query: 463 RNGKGVDELLDSMKADGIDEDEETKEIL 490
L MKA+G++ +EET +L
Sbjct: 550 NAQVPAYGFLQRMKAEGVEANEETHSLL 577
>gi|388512893|gb|AFK44508.1| unknown [Medicago truncatula]
Length = 244
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 118/233 (50%), Gaps = 3/233 (1%)
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
L +KA + LKKAE R+ +D + +++L+SLY S+GNK EV R+W+ K+ N Y
Sbjct: 3 LFEKAQECLKKAEGRILGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGYH 62
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++ +L+++ + E AEK+ +EW S D+RI N +I Y G + + + E
Sbjct: 63 AIISSLVRMDDIEGAEKLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMSEG 122
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G +W +++ G+ + C++ A + + K WKP P + + L DE
Sbjct: 123 GGCPNSTTWELLSEGHIAEKRVSEALSCLEKAF-MTSDSKSWKPKPIKLAAFLKLCQDED 181
Query: 432 SVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDE 484
++ + + LR N + Y A I + + + E +D + ++ +D+D+
Sbjct: 182 DMESAKVLIELLRKPGYHNDEAYAALISKDEPSNRT--ERIDDVDSENMDDDD 232
>gi|242078281|ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
gi|241940259|gb|EES13404.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
Length = 521
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 196/444 (44%), Gaps = 5/444 (1%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+ W+ +G V G + I LR+ + AL+V +W+ R+ + D++ L+
Sbjct: 72 MRGWMADGRAVHRGHVFHAINRLRRHRLHRTALQVMEWIVRERPYKLSELDYSYLLEFTA 131
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+VHG AES F + + + Y L+ + + ++ RKM+E+ + +S Y
Sbjct: 132 KVHGISEAESLFLRVPQEYQKELLYNNLVMAALDLDLIKHSYAYMRKMRELSLPISPYVY 191
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ L+S + + + +L +MKA + P +Y I + +++G+ + +M+
Sbjct: 192 NRLIILHSSPSRRKTISKILYQMKADRVTPHTSTYNILLKIQANEHNIDGLARVFSDMK- 250
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ I + TY A + A L ++ E + + L+ LY LG +
Sbjct: 251 RAKIEPNEITYGILAISHAVARLYTVCHTYVEAIENSMTGTNWSTLEILLILYGYLGKEK 310
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
E+ R W++ + ++ + +EA K+G ++AEK+ + + + T N+++
Sbjct: 311 ELKRTWEIMQD-LPHVRSKSFTVAIEAFGKVGSIDQAEKIWVQIKSTKKLSLTEQFNSIL 369
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
YC +G+V A ++ +++ G ++ +A G +G + + V
Sbjct: 370 SVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCLKSGLVKEALNTIDMGKKEVVT 429
Query: 410 GKGWKPDPKVITS--ILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGK 466
K P + T+ +L + G +++ + + L + N +Y+ +KA ++
Sbjct: 430 KKVRSSTPWLETTHLLLENFAEIGDLENAKRLYSELNESKYSRNSFVYNTLLKAYVKAKV 489
Query: 467 GVDELLDSMKADGIDEDEETKEIL 490
+LL +M G D ET +L
Sbjct: 490 YEPDLLRTMILRGAMPDAETYSLL 513
>gi|125602283|gb|EAZ41608.1| hypothetical protein OsJ_26140 [Oryza sativa Japonica Group]
Length = 524
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 195/444 (43%), Gaps = 5/444 (1%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+ W+ +G V G + + LR+R+ AL+V +W+ R+ + D++ L+
Sbjct: 68 IRGWMGDGRAVHRGHVFHAVNRLRRRRLHRAALQVMEWIMRERPYKLSELDYSYLLEFTA 127
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+VHG AES F + + + Y L+ + A + RKM+E+ + +S Y
Sbjct: 128 KVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELSLPISPYVY 187
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ L+S G+ + + +L +MK + P +Y I + +++G+ + +M+
Sbjct: 188 NRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVARVFNDMK- 246
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + + TY A + A L + ++ E + + L+ LY G
Sbjct: 247 RAKVEPNEITYGILAIAHAVARLYTVSHTYVEAIENSMTGTNWSTLEILLILYGYHGKAK 306
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
E+ WDL + + +I +EA K+G ++AE++ ++E + T N+++
Sbjct: 307 ELKMTWDLMQ-GLPHIRPKSFILAIEAFGKVGSIDQAEEIWGKFESTRKPKLTEQFNSIL 365
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
YC +GLV A A+ +++ G ++ + G AG + + M A V
Sbjct: 366 SVYCRHGLVDKASAVFKEMRANGCQPNAITYRHLTLGCLKAGIVKEALKTMDIAKKEVVT 425
Query: 410 GKGWKPDPKVITS--ILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGK 466
K P + T+ IL + G + + + L + N +Y+ +KA+++
Sbjct: 426 KKVKSSTPWLETTHMILESFAENGDLVNAKRVFDELNESKYCRNSFVYNTLLKAHVKAKV 485
Query: 467 GVDELLDSMKADGIDEDEETKEIL 490
+LL +M G D ET +L
Sbjct: 486 YEPDLLRAMILRGAMPDAETYSLL 509
>gi|302811145|ref|XP_002987262.1| hypothetical protein SELMODRAFT_426086 [Selaginella moellendorffii]
gi|300144897|gb|EFJ11577.1| hypothetical protein SELMODRAFT_426086 [Selaginella moellendorffii]
Length = 564
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 205/456 (44%), Gaps = 21/456 (4%)
Query: 48 PELDNWVKNGNKVRVGEL----QRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAV 103
P + + + NG G+ +R++ R ++R + DW+ + + F +
Sbjct: 13 PMIGHAIGNGQAAWPGKCCQLEERLMNLERHQERNKVVFKALDWVANEKVIPFGYHETLQ 72
Query: 104 QLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
+LDL R H F L ++ Y LL Y ++ + A ++++ +GI
Sbjct: 73 RLDLCSRCHHVTRTLLLFRRLPKQWRSEDAYCILLELYYKRDMLEDAEKTMQELRGIGIK 132
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI---NSYGARSDLEGM 220
S Y+ ++ Y G + ++TE+K + D Y I + +S+G D+ +
Sbjct: 133 -SLQPYHLMLSFYKLRGMEMRFERMVTEIKGSGLALDRSFYTILLAARDSFGG--DMVAV 189
Query: 221 EIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF--- 277
E +L EME + + LD + A Y+++ L K+ VL++ E+ L+ + N
Sbjct: 190 EDVLAEMEGR-GLKLDAVGCLAVAGIYLRSGLRHKSERVLQRLEKSLKSGEFKDSNSIRR 248
Query: 278 -LISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
+++++ LG++ V R+W +E++A D+I +EA ++G+ +EAE + +
Sbjct: 249 RMLAMFGKLGDRDAVDRIWHSIERSASTTV--EDFIFGIEAFGRVGKMDEAEDMYM--RV 304
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
NS + R+ NA + G V A A++E + + ++ ++ Y AG R
Sbjct: 305 GCNSCNPRLHNAFLAVLVEQGDVIRAVALVERMKGVRCLLSTVTYHLLIKVYLKAGDVSR 364
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAA-LRTVIPMNRQMY 454
++ S + + + +P + + +L G VQ E V + P++ ++
Sbjct: 365 ATLAFESLRSAFGKLEWPRPSSETLAVMLEFFVGIGDVQASERLVKKWMEDGFPLSAAVF 424
Query: 455 HAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
H+ + + G GVD M + G++ ET+++L
Sbjct: 425 HSLFRVYAKGGAGVDNFPGRMLSAGVEPTRETEQLL 460
>gi|12322983|gb|AAG51473.1|AC069471_4 hypothetical protein [Arabidopsis thaliana]
Length = 349
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 131/260 (50%), Gaps = 4/260 (1%)
Query: 39 LGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP 98
LG ++ P LD W+K G + L+ +I L + +RF+ AL+VS+W+ ++GI +
Sbjct: 3 LGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRGIFDLST 62
Query: 99 CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQT-DKALSHFRKM 157
D A +L L+ G AE +F ++ ++ + + LL+ Y ++T +A + ++ M
Sbjct: 63 EDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQTM 122
Query: 158 KEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD-NFSYRICINSYGARSD 216
+ + L Y ++ LY+ G+ + ++L +MK + D N + + +Y + D
Sbjct: 123 RVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLPD 182
Query: 217 LEGMEIILREME-SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
+E ME+ L +E +P L W T S A Y+K KA ++L++ E ++ K
Sbjct: 183 VEAMEMFLMGLEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDTKSKDSA 242
Query: 276 N-FLISLYASLGNKSEVLRL 294
N L+ +Y G K + RL
Sbjct: 243 NKVLMMMYWDAGAKQDASRL 262
>gi|449474117|ref|XP_004154078.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like, partial [Cucumis sativus]
Length = 263
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 15/277 (5%)
Query: 22 YYTNRINKTTLYSIISPLGNPGTRIEP-ELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQ 80
++ R+N+T + S G+ P + + +NG + V E+ F
Sbjct: 1 WFDARLNRTGSGTAASLFGSAFVYCWPYKSHDRQENGYAIFVTEI------------FCS 48
Query: 81 ALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNC 140
S+W+ G F D+A ++ LI +V G AESY + + + + ALL
Sbjct: 49 YCVFSEWLEANGQLEFNERDYASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLAN 108
Query: 141 YVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD 200
YV +KA F K+K++ +S YN ++ LY K + K+ DVL M+ +NI P
Sbjct: 109 YVVANNVEKAEEVFNKIKDLEFPMSIFAYNQMLVLYKKIDR-RKIADVLLLMEKENIKPC 167
Query: 201 NFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVL 260
F+Y+I I+ G +D+ GME ++ M+++ I LD ST + A Y+ L KA +L
Sbjct: 168 PFTYKILIDGKGLSNDISGMEQVVDSMKAEG-IELDVSTLSLLAKHYVSCGLKVKAKAIL 226
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
K+ EE L+ Y L + EV RLW++
Sbjct: 227 KEIEETNSNGPQWLCRILLPFYGKLQMEDEVRRLWEI 263
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 198/453 (43%), Gaps = 47/453 (10%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYF 121
EL I++ L + ++++ALEV +WM + F P AV L ++GR + F
Sbjct: 48 ELLSIMKGLGREGQWNKALEVFNWMRQS--VNFRPDGVTIAVMLRILGRESQLTTVSRLF 105
Query: 122 SNLKDDEKTYQTYG--ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
+L+++ Y +L++ R R+ +AL F +MKE G S +TYN I+ LY K
Sbjct: 106 KSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKK 165
Query: 180 GQ-YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
G+ +E + ++ EMKA+ I PD ++Y I + + S E + +M+S + D
Sbjct: 166 GRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSS-NCTPDRV 224
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
TY + Y KA ++A++VLK+ E + + YN L+S + G + + D
Sbjct: 225 TYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKD-- 282
Query: 299 KTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
+ + I D Y ++L A + G+ E+A ++ + S + ++ NA+I + N
Sbjct: 283 -SMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKN 341
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD-----------AGKTERGFQCMKAAL 404
I ED+ G +W + + G + GF+ KA
Sbjct: 342 KNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATF 401
Query: 405 SVYVEG-------------------KGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-R 444
++ +E G PD ++L+ L EG + E + L R
Sbjct: 402 NILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNR 461
Query: 445 TVIPMNRQMYHAFIKANIRNG--KGVDELLDSM 475
+ N Y + + A G + + E++D++
Sbjct: 462 SSYKPNDIAYASMLHAYANGGELEKLKEMVDTL 494
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 17/212 (8%)
Query: 93 ICVFAPC---DHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
+ V++ C D A L R HG+LS S T+ A+++ Y ++ DK
Sbjct: 510 VLVYSKCSLVDEAEDAFLAMRHHGYLSDTS-------------TFNAMISMYGKKGMMDK 556
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A F ++ G+ +TYN +M +Y + G Y K L E A PD SY I
Sbjct: 557 ATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIF 616
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
SY L I EM S I D TY + Y+ + +A V+K + +
Sbjct: 617 SYSKHGQLSSATRIFHEMVSN-GIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCK 675
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
D + Y L+ Y +G EV R+ K++
Sbjct: 676 PDEVTYRTLVDAYCKIGKFEEVERILKFIKSS 707
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/435 (20%), Positives = 187/435 (42%), Gaps = 22/435 (5%)
Query: 68 IIRDL--RKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAES--YFSN 123
+I DL +K + + LE+ + M +GI P ++ + G L E+ F+
Sbjct: 157 VIIDLYGKKGRSWENILELFEEMKAQGI---QPDEYTYNTAITACASGSLCEEATELFTQ 213
Query: 124 LKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
+K T TY ALL+ Y + ++A + ++M+ G + +TYN+++ + + G
Sbjct: 214 MKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGL 273
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
++ M +K I PD F+Y +++Y +E I +M + + + T+
Sbjct: 274 CNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTS-NCTPNSFTFN 332
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
+ + K + + + + + D + +N L+ + G SEVL+++ K A
Sbjct: 333 ALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKA 392
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
+ ++EA + G ++A + +G + D N ++ G ++A
Sbjct: 393 GFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHA 452
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
E IL++L ++A + Y + G+ E+ + + ++YV P K++
Sbjct: 453 ELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYV------PFTKILL 506
Query: 422 SILSKLGDEGSVQD--VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDS---MK 476
+ + S+ D +AF+A + ++A I + G +D+ D+ ++
Sbjct: 507 KTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGM-MDKATDTFALLR 565
Query: 477 ADGIDEDEETKEILV 491
+ G++ D T L+
Sbjct: 566 STGLEPDVVTYNCLM 580
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 114/319 (35%), Gaps = 81/319 (25%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+ Y R +D+ALS + M + G T+N ++ ++ G++E +L E+
Sbjct: 400 TFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDEL 459
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVL----------------- 235
+ P++ +Y +++Y +LE L+EM H +
Sbjct: 460 NRSSYKPNDIAYASMLHAYANGGELEK----LKEMVDTLHTIYVPFTKILLKTFVLVYSK 515
Query: 236 ---------------------DWSTYASAAHFYIKANLIDKASDVL-------------- 260
D ST+ + Y K ++DKA+D
Sbjct: 516 CSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVT 575
Query: 261 --------------KKAEERLEQ-------KDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
+K E L + D + YN +I Y+ G S R++
Sbjct: 576 YNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMV 635
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
+ + + Y T + + G EA V+K +G D ++ YC G +
Sbjct: 636 SNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFE 695
Query: 360 NAEAILEDLVEKGKATTPN 378
E IL+ + K++ PN
Sbjct: 696 EVERILKFI----KSSDPN 710
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 112 HGFLSA------ESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
HG LS+ E + ++ D TY T+ + CYV +ALS + M + G
Sbjct: 621 HGQLSSATRIFHEMVSNGIQPDSFTYNTF---VGCYVNGGMFPEALSVVKHMHKTGCKPD 677
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
+TY ++ Y K G++E+V +L +K+ + NFS
Sbjct: 678 EVTYRTLVDAYCKIGKFEEVERILKFIKSSD---PNFS 712
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 192/446 (43%), Gaps = 31/446 (6%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPC--DHAVQLDLIGRVHGFLSAESYFSNLK 125
+++ L + +AL + NR G FAP + LD + R + S +
Sbjct: 138 VVKSLSRLGFVPKALTLLHLANRHG---FAPTVLSYNAVLDALLR-----RSSSNHRDYD 189
Query: 126 DDEKTYQ------------TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
D E+ ++ TY ++ V Q +K L RKM++ GI+ + +TYN ++
Sbjct: 190 DAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLI 249
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
K + ++ +L M + + SY IN + + + ++ EM + +
Sbjct: 250 DASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG-L 308
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
V D TY + + + K + + +L + + + + Y LI+ GN S +
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
++D + R R Y T+++ + G EA KVL E +SG S NA++ GYC
Sbjct: 369 IFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC 428
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
G VQ A IL +VE+G S++ V AG+ + + FQ MK + VE KG
Sbjct: 429 FLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQ-MKEEM---VE-KGV 483
Query: 414 KPDPKVITSILSKLG-DEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDE 470
PD +S++ L + V+ + F +R +P + Y + I A +G+
Sbjct: 484 LPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALR 543
Query: 471 LLDSMKADGIDEDEETKEILVCTMEK 496
L D M G D T +L+ + K
Sbjct: 544 LHDEMVQRGFLPDNVTYSVLINGLNK 569
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 162/380 (42%), Gaps = 31/380 (8%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
L+ +E+TY T L++ + ++ ++A +M G + S +TYN ++ Y G+ +
Sbjct: 378 LRPNERTYTT---LIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQ 434
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+ +L M + + PD SY I + +L G ++E + ++ D TY+S
Sbjct: 435 EAVGILRGMVERGLPPDVVSYSTVIAGFCREREL-GKAFQMKEEMVEKGVLPDTVTYSSL 493
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
+ +A D+ ++ R D + Y LI+ Y G S+ LRL D + +
Sbjct: 494 IQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHD--EMVQR 551
Query: 304 RYI--NRDYITMLEALMKLGEHEEAEKVL-----KEWELSGNSYDTRIPN---------- 346
++ N Y ++ L K + A+++L +E +Y+T I N
Sbjct: 552 GFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVE 611
Query: 347 AVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSV 406
++ G+C GL+ A+ + + ++++ + ++ G+ G + + L +
Sbjct: 612 GLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYN-----LYM 666
Query: 407 YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA-ALRTVIPMNRQMYHAFIKANIRNG 465
+E + + +++ L EG ++ + LR+ + ++ ++ N + G
Sbjct: 667 ELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEG 726
Query: 466 K--GVDELLDSMKADGIDED 483
V +L M DG+ D
Sbjct: 727 NMDAVLNVLTEMAKDGLLPD 746
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 170/394 (43%), Gaps = 19/394 (4%)
Query: 104 QLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
QL + H L + N+ D +Y +++ Y + Q K L +++ G+
Sbjct: 264 QLGKVKEAHSLLIQMEFRGNVPD----VVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLK 319
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII 223
+ TYN I+ KTG+ + VL MK + IFPDN Y I+ +G ++ +
Sbjct: 320 PNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKL 379
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
EM+ + IV D+ TY S H +A + +A + + + + D + Y LI Y
Sbjct: 380 FDEMKRK-KIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYC 438
Query: 284 SLGNKSEVLRLWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
G E L + +EK + Y +++ L K GE + A ++L E G +
Sbjct: 439 KAGEMKEAFSLHNQMVEKGLTPNVVT--YTALVDGLCKCGEVDIANELLHEMSEKGLQPN 496
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
NA+I G C G ++ A ++E++ G ++ + Y G+ + + ++
Sbjct: 497 VCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLR 556
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIK 459
L KG +P +++ G ++D E + + + ++P N +++ +K
Sbjct: 557 IMLD-----KGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMP-NATTFNSLMK 610
Query: 460 A-NIRNG-KGVDELLDSMKADGIDEDEETKEILV 491
IRN + E+ M A G+ D T IL+
Sbjct: 611 QYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILI 644
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 138/290 (47%), Gaps = 16/290 (5%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A FR+ E+G+ +T++YN I+ L + G+ ++ +L +M+ + PD SY + ++
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
Y L + ++ E++ + + + TY S F K + +A VL+ + +
Sbjct: 296 GYCQVEQLGKVLKLMEELQRK-GLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIF 354
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEA 326
D + Y LIS + GN S +L+D K ++ I D++T M+ L + G+ EA
Sbjct: 355 PDNVVYTTLISGFGKSGNVSVEYKLFDEMK---RKKIVPDFVTYTSMIHGLCQAGKVVEA 411
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVA 384
K+ E G D A+I GYC G ++ A ++ +VEKG TPN ++ +
Sbjct: 412 RKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG--LTPNVVTYTALV 469
Query: 385 AGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
G G+ + + + + KG +P+ ++++ L G+++
Sbjct: 470 DGLCKCGEVDIANELLHE-----MSEKGLQPNVCTYNALINGLCKVGNIE 514
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 160/396 (40%), Gaps = 52/396 (13%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRD----------LRKRKR 77
N+ T SIIS L G +E E +RV + QRI D K
Sbjct: 321 NQYTYNSIISFLCKTGRVVEAE--------QVLRVMKNQRIFPDNVVYTTLISGFGKSGN 372
Query: 78 FSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGF------LSAESYFS-----NLKD 126
S ++ D M RK I P D +I HG + A FS LK
Sbjct: 373 VSVEYKLFDEMKRKKI---VP-DFVTYTSMI---HGLCQAGKVVEARKLFSEMLSKGLKP 425
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
DE TY AL++ Y + + +A S +M E G+ + +TY ++ K G+ +
Sbjct: 426 DEVTYT---ALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIAN 482
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
++L EM K + P+ +Y IN ++E ++ EM+ D TY +
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFP-DTITYTTIMDA 541
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL--WDLEKTACKR 304
Y K + KA ++L+ ++ Q + +N L++ + G + RL W L+K
Sbjct: 542 YCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPN 601
Query: 305 YINRDYITMLEALMKL----GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
T +LMK ++ K G DT N +I G+C ++
Sbjct: 602 ------ATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKE 655
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
A + +++VEKG + T S+ + G++ K E
Sbjct: 656 AWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEA 691
>gi|12321886|gb|AAG50982.1|AC073395_24 hypothetical protein, 3' partial; 101251-102939 [Arabidopsis
thaliana]
Length = 532
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 177/409 (43%), Gaps = 69/409 (16%)
Query: 31 TLYSIISPLGNPGTRIEP----ELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
TL S I + I L + G ++ L+ I+ LR R QALEVSD
Sbjct: 38 TLQSRIEAASHQKAEITTVLEQWLQQQQQQGKQLNPSLLRGIVEKLRSSNRPRQALEVSD 97
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQ-- 144
WM + + P D + + L +V AE +F ++ ++ + Y +LL Y RQ
Sbjct: 98 WMVEQKMYNL-PEDFSARFHLTEKVLNLEEAEKFFESIPENMRFESMYNSLLRSYARQSG 156
Query: 145 -RQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
+ KA S F+KMK++G+ L YN + LYS G +KV ++L EMK N+ DN +
Sbjct: 157 EKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNRDKVDEILREMKENNVELDNVT 216
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
+ Y A SD+ M+ L + +K
Sbjct: 217 VNNALRVYAAVSDVATMDKFLAD----------------------------------RKE 242
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEH 323
RL DG+ + Y G +V R+WD K A ++ N ++ T++ +L+KLG+
Sbjct: 243 ITRL---DGLTMLAMAKAYVRDGEIEDVHRVWDKYK-ATRQKDNEEFRTLIGSLLKLGDT 298
Query: 324 EEAEKV-LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA-----------------IL 365
+ AEK+ EWE SG +D RIP+ ++ GY G+V A+ +L
Sbjct: 299 KGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMVMKADKLVNKTLWIRGLATPITLLL 358
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ-----CMKAALSVYVE 409
E++ +KG +P + D+ + + + C K +++ E
Sbjct: 359 EEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSE 407
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 8/176 (4%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
+NKT I L P T + E+D K GNKV L+ +I++LR + S+ALE S
Sbjct: 341 VNKTLW---IRGLATPITLLLEEMD---KKGNKVSPPGLRDLIKNLRDSNQLSKALEAST 394
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYF-SNLKDDEKTYQTYGALLNCYVRQR 145
WM +K + D+A +L L +V G AE++F S++ ++ K Y Y LL+CY R
Sbjct: 395 WMCQKKVFNLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSS 454
Query: 146 QT-DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD 200
T KA + F KM+E+G+ +N ++ LYS G+ V +L +MK KNI PD
Sbjct: 455 NTQSKAEAVFEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPD 510
>gi|302798913|ref|XP_002981216.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
gi|300151270|gb|EFJ17917.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
Length = 463
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 192/462 (41%), Gaps = 28/462 (6%)
Query: 40 GNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPC 99
G P I L W+ G + GE+ ++ L+ RF QA E+SDW+ ++
Sbjct: 19 GGPVLHI---LHQWIAEGRESH-GEIIAAMKRLKWLGRFKQAYEISDWVIKERSLELQKF 74
Query: 100 DHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY-QTYGALLNC---YVRQRQTDKALSHFR 155
LDL GRV +A+++ L + Y ++ AL+ YV KA +
Sbjct: 75 HFINHLDLTGRVVNMNAAKNFL--LTKMPRVYAKSEAALITMFENYVIHSLLSKARLVLK 132
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARS 215
MKE + + +N + LY+ + + +P +L EM+ I P+ +Y I I +
Sbjct: 133 LMKEKNLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYNILIGIKAKKG 192
Query: 216 DLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE-QKDGIG 274
D EGME + +M+ + + A Y+ A +KA LK+A E Q+
Sbjct: 193 DTEGMERLFSKMKCDGDGTPNCEILCTLASGYVNAGDHEKAMAYLKEAVASEEFQESRRV 252
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
++ +I+LYA++G + R+W + N Y+ + A K+G + AEKV E
Sbjct: 253 HDKVIALYAAMGRADMIDRIWRFTRRFPVVSAN-SYVATIAAYEKVGRIDRAEKVFA--E 309
Query: 335 LSGNSYDTRIPNAVII--GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
L+ R + V + YC G + AE +LE + S+ + AGY +G
Sbjct: 310 LTEKRTLLRPAHYVPLFRAYCEGGEMGKAEKLLERIRHGNGHINNLSYHHLVAGYMKSGN 369
Query: 393 TERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA----FVAALRTVIP 448
+ + + V P +++ L + DV + F R
Sbjct: 370 PKMAAETLNRMFEERV--------PPCFDTVMLILKEHAKNADVSSAELLFQDMRRESYN 421
Query: 449 MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
N Y++ ++A + GK L M D + + T E+L
Sbjct: 422 KNVAAYNSLLEAYVNAGKHAYRFLQRMATDKVAPNARTFELL 463
>gi|302801578|ref|XP_002982545.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
gi|300149644|gb|EFJ16298.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
Length = 1138
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 214/459 (46%), Gaps = 18/459 (3%)
Query: 45 RIEPELDNWVKNGNKVRVG--ELQRIIRDLRKRKRFSQALEVSDWM--NRKGICVFAPCD 100
R++ + W+++ + V VG E ++R LRKRKR ALE++DWM +R D
Sbjct: 677 RVQRIVRGWLRSRD-VEVGKHEFVYVMRRLRKRKRVKHALEIADWMALSRPRPFTLTTKD 735
Query: 101 HAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEM 160
+ ++DL R AE F L + ++ Y ALL Y ++++ +A F+++K
Sbjct: 736 NIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNALLLSYTKKKKRGRAERLFKELKAT 795
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGM 220
G S + N + +Y + G +V + E + + D Y + + + LE +
Sbjct: 796 GTISSCYSLNLLASMYRQLGLDAEVLMLAKEAQKLGVELDMCFYNLLLPAKFRVQGLEEV 855
Query: 221 EIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ----KDGIGYN 276
E + + S P + T + A+ Y+ A DK ++L+ ++ +E K YN
Sbjct: 856 EKLYATITS-PRDRTRFFTCLAMANIYVSAGRNDKVLEMLELIDQGMEAGTIVKQRRRYN 914
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRYIN-RDYITMLEALMKLGEHEEAEKVLKEWEL 335
LIS+YASL + + V R W E+ +R N DY ++ A KLG AE + + E
Sbjct: 915 VLISMYASLEDGARVERTW--ERLKQQRQPNTEDYCCIIRAWGKLGHVVRAETIFQVAEA 972
Query: 336 SGNS--YDTRIPNAVIIGYCNNGLVQNAEAILEDL-VEKGKATTPNSWAVVAAGYFDAGK 392
+ S Y T + NA++ Y G+ + AE +++ + E G P + + Y AG
Sbjct: 973 NEKSLKYST-VFNAMMFVYSVAGMREEAEGLVQRMEYELGVKLDPWCYHHLVLLYAKAGD 1031
Query: 393 TERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNR 451
+ ++AA + + + + P + + L+ L D G V E + R+ +
Sbjct: 1032 IGKMLSTLRAAQAGGKKERRFTPLAATLWAALNTLADAGDVDTAEETLTRWKRSGYRVTT 1091
Query: 452 QMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+Y+ ++A++ + + ++ M DG+ + ET+++
Sbjct: 1092 GLYNRLLRAHLVAARPTERFVERMLVDGVVPNGETEKLF 1130
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 203/466 (43%), Gaps = 37/466 (7%)
Query: 46 IEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQL 105
+ P L W + GN + L+ I+ LRK KR S ALEV+DWM D +++
Sbjct: 94 VVPMLKEWEEEGNVLDKEMLRAIMLKLRKWKRGSLALEVADWMYYTKQFPQDLDDVILRM 153
Query: 106 DLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
D+ R A+ F L+ EKT Y + + +++ A + K KE + +
Sbjct: 154 DMAVRAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKEAKLKPN 213
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP-DNFSYRICINSYGARSDLEGMEIIL 224
+T++ + CLY + G + KV + +++A + P F + ++ Y EI
Sbjct: 214 DITFSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMVSKYELHGISSAEEIFN 273
Query: 225 REMES-----QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ----KDGIGY 275
+ + + + H+ STY+ A Y+ A + DKA ++L+ E+ ++Q K Y
Sbjct: 274 QLVPAGSDLKRSHL----STYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPKLRRTY 329
Query: 276 NFLISLYASLGNKSEVLRLW----DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
+ LIS+Y+++ N+ + R+W DL+ +DY+ M+E+ + E AEK K
Sbjct: 330 HILISMYSTMKNRDGMERVWKKIEDLKA--------QDYVAMIESCGRADEVGSAEKYFK 381
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
E + G + A++ Y G AE + + + E+ + + + +A
Sbjct: 382 EADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDALCYHYIILANLNAK 441
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE-GSVQDVEAFVA-----ALRT 445
+R + ++ A + + +P +L + E G V E +A RT
Sbjct: 442 NIDRAVEILELAEAAGMRDGRSRPFLGTFCDVLKTIAKETGDVALAETLLADWRKGKYRT 501
Query: 446 VIPMNRQMYHAFIKANIRNGKGVD-ELLDSMKADGIDEDEETKEIL 490
I + + ++KA GK V L + + + ET ++L
Sbjct: 502 DIAVYNHLLRVYLKA----GKQVQGPFLKRLAGNNMKPTRETHQLL 543
>gi|302798621|ref|XP_002981070.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
gi|300151124|gb|EFJ17771.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
Length = 1138
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 213/459 (46%), Gaps = 18/459 (3%)
Query: 45 RIEPELDNWVKNGNKVRVG--ELQRIIRDLRKRKRFSQALEVSDWM--NRKGICVFAPCD 100
R++ + W+++ + V VG E ++R LRKRKR ALE++DWM +R D
Sbjct: 677 RVQRIVRGWLRSRD-VEVGKHEFVYVMRRLRKRKRVKHALEIADWMALSRPRPFTLTTKD 735
Query: 101 HAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEM 160
+ ++DL R AE F L + ++ Y ALL Y ++++ +A F+++K
Sbjct: 736 NIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNALLLSYTKKKKRGRAERLFKELKAT 795
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGM 220
G S + N + +Y + +V + E + + D Y + + + LE +
Sbjct: 796 GTISSCYSLNLLASMYRQLRLDAEVLMLAKEAQKLGVELDMCFYNLLLPAKFRVQGLEDV 855
Query: 221 EIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ----KDGIGYN 276
E + + S P + T + A+ Y+ A DK ++L+ ++ +E K YN
Sbjct: 856 EKLYATITS-PRDRTRFFTCLAMANIYVSAGRNDKVLEMLELIDQGMEAGTIVKQRRRYN 914
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRYIN-RDYITMLEALMKLGEHEEAEKVLKEWEL 335
LIS+YASL + + V R W E+ +R N DY ++ A KLG AE + + E
Sbjct: 915 VLISMYASLEDGARVERTW--ERLKQQRQPNTEDYCCIIRAWGKLGHVVRAETIFQVAEA 972
Query: 336 SGNS--YDTRIPNAVIIGYCNNGLVQNAEAILEDL-VEKGKATTPNSWAVVAAGYFDAGK 392
+ S Y T + NA++ Y G+ + AE ++ + E G P + + Y AG
Sbjct: 973 NEKSLKYST-VFNAMMFVYSVAGMREEAEGLVRRMEYELGVKLDPWCYHHLVLLYAKAGD 1031
Query: 393 TERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNR 451
+ ++AA + + + + P + + L+ L D G V E + R+ +
Sbjct: 1032 IGKMLSTLRAAQACGKKERRFTPLAATLWAALNTLADAGDVDTAEETLTRWKRSGYRVTT 1091
Query: 452 QMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+Y+ ++A++ + + ++ M ADG+ + ET+++
Sbjct: 1092 GLYNRLLRAHLVAARPTERFVERMLADGVVPNGETEKLF 1130
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 203/466 (43%), Gaps = 37/466 (7%)
Query: 46 IEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQL 105
+ P L W + GN + L+ I+ LRK KR S ALEV+DWM D +++
Sbjct: 94 VVPMLKEWEEEGNVLDKEMLRAIMLKLRKWKRGSLALEVADWMYYTKQFPQDLDDVILRM 153
Query: 106 DLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
D+ R A+ F L+ EKT Y + + +++ A + K KE + +
Sbjct: 154 DMAVRAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKEAKLKPN 213
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP-DNFSYRICINSYGARSDLEGMEIIL 224
+T++ + CLY + G + KV + +++A + P F + ++ Y EI
Sbjct: 214 DITFSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMVSKYELHGISSAEEIFN 273
Query: 225 REMES-----QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ----KDGIGY 275
+ + + + H+ STY+ A Y+ A + DKA ++L+ E+ ++Q K Y
Sbjct: 274 QLVPAGSDLKRSHL----STYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPKLRRTY 329
Query: 276 NFLISLYASLGNKSEVLRLW----DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
+ LIS+Y+++ N+ + R+W DL+ +DY+ M+E+ + E AEK K
Sbjct: 330 HILISMYSTMKNRDGMERVWKKIEDLKA--------QDYVAMIESCGRADEVGSAEKYFK 381
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
E + G + A++ Y G AE + + + E+ + + + +A
Sbjct: 382 EADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDALCYHYIILANLNAR 441
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE-GSVQDVEAFVA-----ALRT 445
+R + ++ A + + +P +L + E G V E +A RT
Sbjct: 442 NIDRAVEILELAEAAGMRDGRSRPFLGTFCDVLKTIARETGDVALAETLLADWRKGKYRT 501
Query: 446 VIPMNRQMYHAFIKANIRNGKGVD-ELLDSMKADGIDEDEETKEIL 490
I + + ++KA GK V L + + + ET ++L
Sbjct: 502 DIAVYNHLLRVYLKA----GKQVQGPFLKRLAGNNMKPTRETHQLL 543
>gi|302801860|ref|XP_002982686.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
gi|300149785|gb|EFJ16439.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
Length = 463
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 192/462 (41%), Gaps = 28/462 (6%)
Query: 40 GNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPC 99
G P I L W+ G + GE+ ++ L+ RF QA E+SDW+ ++
Sbjct: 19 GGPVLHI---LHQWIAEGRESH-GEIIAAMKRLKWLGRFKQAYEISDWVIKERSLELQKF 74
Query: 100 DHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY-QTYGALLNC---YVRQRQTDKALSHFR 155
L+L GRV +A+++ L + Y ++ AL+ YV KA +
Sbjct: 75 HFINHLELTGRVVNMNAAKNFL--LTKMPRVYAKSEAALITMFENYVIHSLLSKARLVLK 132
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARS 215
MKE + + +N + LY+ + + +P +L EM+ I P+ +Y I I +
Sbjct: 133 LMKEKNLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYNILIGIKAKKG 192
Query: 216 DLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG- 274
D EGME + +M+ + + A Y+ A +KA LK+A E ++
Sbjct: 193 DTEGMERLFSKMKCDGDGTPNGEILCTLASGYVNAGDHEKAMAYLKEAVASDEFRESRRV 252
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
++ +I+LYA++G + R+W + N Y+ + A K+G + AEKV E
Sbjct: 253 HDKVIALYAAMGRADMIDRIWRFTRRFPVVSAN-SYVATIAAYEKVGRIDRAEKVFA--E 309
Query: 335 LSGNSYDTRIPNAVII--GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
L+ R + V + YC G + AE +LE + S+ + AGY +G
Sbjct: 310 LTEKRTLLRPAHYVPLFRAYCEGGEMGKAEKLLERIRHGNGHINNLSYHHLVAGYMKSGN 369
Query: 393 TERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA----FVAALRTVIP 448
+ + + V P +++ L + DV + F R
Sbjct: 370 PKMAAETLTRMFEERV--------PPCFDTVMLILKEHAKNADVNSAELLFQDMRRESYN 421
Query: 449 MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
N Y++ ++A + GK L M D + + T E+L
Sbjct: 422 KNVAAYNSLLEAYVNAGKHAYRFLQRMATDKVAPNARTFELL 463
>gi|15222438|ref|NP_172238.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163930|sp|Q940Q2.1|PPR19_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07590, mitochondrial; Flags: Precursor
gi|15809864|gb|AAL06860.1| At1g07590/F22G5_2 [Arabidopsis thaliana]
gi|332190025|gb|AEE28146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 198/457 (43%), Gaps = 17/457 (3%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA 102
G + L +W+ +G V G++ I LRK R +ALE+ +W+ R+ +++
Sbjct: 78 GVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYS 137
Query: 103 VQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
L+ ++HG E F+ + + + Y L+ + Q AL + +KM+E+G
Sbjct: 138 YLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGY 197
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
S L YN ++ S G+ + + L MKA P +Y I + +++G+
Sbjct: 198 RTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLK 257
Query: 223 ILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
M+ +P+ V +Y A + A L A ++ E+ + + + L+
Sbjct: 258 AFDGMKKAGVEPNEV----SYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILM 313
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
LY LG + E+ R W++ + ++ Y+ EA ++G + AE++ E +
Sbjct: 314 ILYGRLGKEKELARTWNVIR-GFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGL 372
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS--WAVVAAGYFDAGKTERGF 397
+T N+++ YC +GL++ A + ++ G PNS + +A G A +
Sbjct: 373 KETEQFNSLLSVYCKDGLIEKAIGVFREMT--GNGFKPNSITYRHLALGCAKAKLMKEAL 430
Query: 398 QCMKAALSVYVEGKGWKPDPKVIT--SILSKLGDEGSVQDVEAFVAALRTVIPMNRQ--M 453
+ ++ L++ P + T SI+ ++G V++ E ++ NR +
Sbjct: 431 KNIEMGLNLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNA-KYNRYAFV 489
Query: 454 YHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
Y+A KA ++ L M G D E+ +L
Sbjct: 490 YNALFKAYVKAKVYDPNLFKRMVLGGARPDAESYSLL 526
>gi|91806413|gb|ABE65934.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 279
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 8/176 (4%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
+NKT I L P T + E+D K GNKV L+ +I++LR + S+ALE S
Sbjct: 87 VNKTLW---IRGLATPITLLLEEMD---KKGNKVSPPGLRDLIKNLRDSNQLSKALEAST 140
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYF-SNLKDDEKTYQTYGALLNCYVRQR 145
WM +K + D+A +L L +V G AE++F S++ ++ K Y Y LL+CY R
Sbjct: 141 WMCQKKVFNLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSS 200
Query: 146 QT-DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD 200
T KA + F KM+E+G+ +N ++ LYS G+ V +L +MK KNI PD
Sbjct: 201 NTQSKAEAVFEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPD 256
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 24/154 (15%)
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL-KEWELSG 337
+SLY G +V R+WD K A ++ N ++ T++ +L+KLG+ + AEK+ EWE SG
Sbjct: 1 MSLYGEAGEIEDVHRVWDKYK-ATRQKDNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSG 59
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEA-----------------ILEDLVEKGKATTPNSW 380
+D RIP+ ++ GY G+V A+ +LE++ +KG +P
Sbjct: 60 LEFDNRIPDMLVSGYREKGMVMKADKLVNKTLWIRGLATPITLLLEEMDKKGNKVSPPGL 119
Query: 381 AVVAAGYFDAGKTERGFQ-----CMKAALSVYVE 409
+ D+ + + + C K +++ E
Sbjct: 120 RDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSE 153
>gi|302801852|ref|XP_002982682.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
gi|300149781|gb|EFJ16435.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
Length = 414
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 182/438 (41%), Gaps = 60/438 (13%)
Query: 65 LQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL 124
L +I LR +F QA E+ DWM R + DH + L+L+GR+ F A F +
Sbjct: 6 LLNVIYKLRITAKFGQAREICDWMIRNKVFEIEESDHVLLLELVGRISKF-QATRCFWEM 64
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
+ ++ Y A+L + R A +MK + + YN ++ +Y + + +K
Sbjct: 65 PAELRSEAAYTAMLQVFARWHAIPAAEDTMSEMKSLNLITRVEPYNIMLDMYKRKNEDDK 124
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
V + E+ + + PD +Y I + + +G+E
Sbjct: 125 VRAMYDELSSLGVAPDAHTYLIVLRAKQKIGGFDGIE----------------------- 161
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIG-YNFLISLYASLGNKSEVLRLWDLEKTACK 303
++V K +E+L + + Y ++ +Y L + + + L + K
Sbjct: 162 ------------AEVRKFLDEQLTSRQPLFIYECMLRIYTLLRDLTAIENLRSILLKTFK 209
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN--AVIIGYCNNGLVQNA 361
++ + Y +L+A +LGE E AE++ E GN + I + A+I Y +NG ++ A
Sbjct: 210 KFSSSSYNCLLDAYRQLGEVERAERLFNE---IGNKFTLNIQSYRAMIAVYASNGRMEKA 266
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW------KP 415
+ + L G P + + AGY DA AL Y GK W P
Sbjct: 267 NELYKQLFRAGFECHPAIYHAMVAGYIDARDHSN-------ALIQY--GKAWDRSLLGHP 317
Query: 416 DPKVITS--ILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGKGVDELL 472
P T+ +L L ++G E+ V L R + ++Y+ +KA I+ V
Sbjct: 318 KPLRATTLLVLRVLAEQGDFSRAESIVRDLKRERQGSDVEVYNWLLKAYIKAEVPVFGFD 377
Query: 473 DSMKADGIDEDEETKEIL 490
M A G+ ++E+ E+L
Sbjct: 378 GRMLAAGVRPNDESLELL 395
>gi|15229739|ref|NP_187745.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322901|gb|AAG51439.1|AC008153_12 hypothetical protein; 6614-8314 [Arabidopsis thaliana]
gi|332641514|gb|AEE75035.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 541
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 8/176 (4%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
+NKT I L P T + E+D K GNKV L+ +I++LR + S+ALE S
Sbjct: 349 VNKTLW---IRGLATPITLLLEEMD---KKGNKVSPPGLRDLIKNLRDSNQLSKALEAST 402
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYF-SNLKDDEKTYQTYGALLNCYVRQR 145
WM +K + D+A +L L +V G AE++F S++ ++ K Y Y LL+CY R
Sbjct: 403 WMCQKKVFNLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSS 462
Query: 146 QT-DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD 200
T KA + F KM+E+G+ +N ++ LYS G+ V +L +MK KNI PD
Sbjct: 463 NTQSKAEAVFEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPD 518
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 162/375 (43%), Gaps = 67/375 (17%)
Query: 65 LQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL 124
L+ I+ LR R QALEVSDWM + + P D + + L +V AE +F ++
Sbjct: 78 LRGIVEKLRSSNRPRQALEVSDWMVEQKMYNL-PEDFSARFHLTEKVLNLEEAEKFFESI 136
Query: 125 KDDEKTYQTYGALLNCYVRQ---RQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
++ + Y +LL Y RQ + KA S F+KMK++G+ L YN + LYS G
Sbjct: 137 PENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGN 196
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
+KV ++L EMK N+ DN + + Y A SD+ M+ L + + LD T
Sbjct: 197 RDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLADRKEITR--LDGLTML 254
Query: 242 SAAHFYIKANLIDKASDV--LKKAEERLE---QKDGIGYNFLISLYASLGNKSEVLRLWD 296
+ A Y +L +A ++ + + ++ + QKD + LI +L+L D
Sbjct: 255 AMAKAYELMSLYGEAGEIEDVHRVWDKYKATRQKDNEEFRTLIG---------SLLKLGD 305
Query: 297 LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
K A K Y N EWE SG +D RIP+ ++ GY G
Sbjct: 306 -TKGAEKIYYN------------------------EWECSGLEFDNRIPDMLVSGYREKG 340
Query: 357 LVQNAEA-----------------ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ- 398
+V A+ +LE++ +KG +P + D+ + + +
Sbjct: 341 MVMKADKLVNKTLWIRGLATPITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEA 400
Query: 399 ----CMKAALSVYVE 409
C K +++ E
Sbjct: 401 STWMCQKKVFNLFSE 415
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 183/415 (44%), Gaps = 16/415 (3%)
Query: 58 NKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH--AVQLDLIGRVHGFL 115
NK+ + + I R+ +R + +AL + +M R C P +H + + ++GR
Sbjct: 34 NKLTINDFSLIFREFAQRSDWQKALRLFKYMQRHQWC--KPNEHVYTIMIGIMGREGMLD 91
Query: 116 SAESYFSN--LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A F + L D E ++ AL+N Y R Q + +L +MK + + +TYN ++
Sbjct: 92 KASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVI 151
Query: 174 CLYSKTG-QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH 232
+K G ++E + + +M+ + I PD +Y +++ +R +E ++ R M ++
Sbjct: 152 NACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTM-NEAG 210
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
+V D TY + Y +A+ + ++L++ E+ D + YN LI Y G
Sbjct: 211 VVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAA 270
Query: 293 RLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
+++ +++ C + + T+LEA K G ++E + + + G D N +I
Sbjct: 271 KMFKQMQEAGCTPDV-VTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQV 329
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
+ G Q + + DL++ G +++A + G + + + L YV
Sbjct: 330 FGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYV--- 386
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVE-AFVAALRTVIPMNRQMYHAFIKANIRNG 465
P T +++ G+ + AF + + + + Y+A I A+ G
Sbjct: 387 --TPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGG 439
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 140/351 (39%), Gaps = 14/351 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LL+ + ++A FR M E G+ ++TYN ++ +Y + ++E V ++L EM
Sbjct: 182 TYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREM 241
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD +Y I I +YG + ++M+ + D T+++ Y K
Sbjct: 242 EQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQ-EAGCTPDVVTFSTLLEAYGKHGC 300
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTACKRYINRDYI 311
D+ + +ER + D YN LI ++ G E + L WDL + ++ Y
Sbjct: 301 YDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMS-TYA 359
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+L + K G H+ A+K+ + S + T +I Y N L A + E
Sbjct: 360 GLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKES 419
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G ++ + + AG G C + + + +G D S++ G G
Sbjct: 420 GCKPDLETYNALIGAH--AGG---GLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGG 474
Query: 432 SVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVDELLDSMKADGID 481
D F + NR Y A + G L D KA +D
Sbjct: 475 LFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAG-----LFDEAKAQFLD 520
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 120/286 (41%), Gaps = 9/286 (3%)
Query: 103 VQLDLIGRVHGFLSAESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEM 160
+ ++ GR + +A F +++ T T+ LL Y + D+ F MKE
Sbjct: 255 ILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKER 314
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGM 220
G TYN ++ ++ + G +++ ++ ++ + PD +Y + S G +
Sbjct: 315 GTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAA 374
Query: 221 EIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
+ I R M Q ++ + Y A L +A+ +E + D YN LI
Sbjct: 375 KKIHRHM-LQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIG 433
Query: 281 LYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSG 337
+A G E + T I+ D Y +++EA + G ++A + ++ E +
Sbjct: 434 AHAGGGLYCEAGSAY---LTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEAR 490
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
S + A++ YC GL A+A DL G+ + +S+ ++
Sbjct: 491 CSPNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGGELPSVDSYCLL 536
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 189/467 (40%), Gaps = 53/467 (11%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGIC-VFAPCDHAVQLDL-IGRVHG--FLSAESYFSN 123
+I+ R +A E M KG+ C+ + L L + R L AE +
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+K + T+ ++N ++ + KA M+ G+ + +TYN I+ Y +G+ E
Sbjct: 217 IKS---SVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVL----- 235
+LT MK + I PD+F+Y I+ + LE I EM + P V+
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Query: 236 --------------------------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
STY S H D+A ++K+ +E+
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
D I YN LI+ Y N + L D + + + Y ++L L K +EA+ +
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
K+ G D + NA+I G+C+N V+ A +L+D+ ++ + G+
Sbjct: 454 FKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA---ALRTV 446
GK E + ++ +G KPD +++S G ++D AF L T
Sbjct: 514 EGKVEEARELFDE-----MKRRGIKPDHISFNTLISGYSRRGDIKD--AFRVRNEMLDTG 566
Query: 447 IPMNRQMYHAFIKANIRNGKG--VDELLDSMKADGIDEDEETKEILV 491
Y+A ++ +N +G +ELL M + G+ D+ T L+
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 147/365 (40%), Gaps = 17/365 (4%)
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
K+ + L+ + D+A F MKE G+ + T N ++ L+ K + E +
Sbjct: 149 KSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVL 208
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAH 245
EM I +++ I IN L+ + + ME+ +P+IV TY + H
Sbjct: 209 YAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIV----TYNTIVH 264
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
Y + ++ A +L + + + D Y LIS G E ++++ R
Sbjct: 265 GYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y T+++ G + A E G S N++I AE ++
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMI 384
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+++ EKG + ++ ++ GY ++ F L+ G KP K TS+L
Sbjct: 385 KEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLA-----SGIKPTKKTYTSLLH 439
Query: 426 KLGDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGID 481
L + +++ + + + V+P + M++A I + N KG ELL M +
Sbjct: 440 VLSKKNRMKEADDLFKKITSEGVLP-DVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVP 498
Query: 482 EDEET 486
DE T
Sbjct: 499 PDEVT 503
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 122/260 (46%), Gaps = 7/260 (2%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY +L++ +++TD+A ++++E GI+ +TYN ++ Y + +K +
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLH 419
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM A I P +Y ++ ++ ++ + + +++ S+ ++ D + + +
Sbjct: 420 DEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE-GVLPDVIMFNALIDGHCS 478
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ + A ++LK + D + +N ++ + G E L+D K +R I D
Sbjct: 479 NSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMK---RRGIKPD 535
Query: 310 YI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+I T++ + G+ ++A +V E +G + NA++ G C N AE +L+
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLK 595
Query: 367 DLVEKGKATTPNSWAVVAAG 386
++V KG ++ + G
Sbjct: 596 EMVSKGMTPDDTTYFTLIEG 615
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 189/467 (40%), Gaps = 53/467 (11%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGIC-VFAPCDHAVQLDL-IGRVHG--FLSAESYFSN 123
+I+ R +A E M KG+ C+ + L L + R L AE +
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+K + T+ ++N ++ + KA M+ G+ + +TYN I+ Y +G+ E
Sbjct: 217 IKS---SVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVL----- 235
+LT MK + I PD+F+Y I+ + LE I EM + P V+
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Query: 236 --------------------------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
STY S H D+A ++K+ +E+
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
D I YN LI+ Y N + L D + + + Y ++L L K +EA+ +
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
K+ G D + NA+I G+C+N V+ A +L+D+ ++ + G+
Sbjct: 454 FKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA---ALRTV 446
GK E + ++ +G KPD +++S G ++D AF L T
Sbjct: 514 EGKVEEARELFDE-----MKRRGIKPDHISFNTLISGYSRRGDIKD--AFRVRNEMLDTG 566
Query: 447 IPMNRQMYHAFIKANIRNGKG--VDELLDSMKADGIDEDEETKEILV 491
Y+A ++ +N +G +ELL M + G+ D+ T L+
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 147/365 (40%), Gaps = 17/365 (4%)
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
K+ + L+ + D+A F MKE G+ + T N ++ L+ K + E +
Sbjct: 149 KSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVL 208
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAH 245
EM I +++ I IN L+ + + ME+ +P+IV TY + H
Sbjct: 209 YAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIV----TYNTIVH 264
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
Y + ++ A +L + + + D Y LIS G E ++++ R
Sbjct: 265 GYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y T+++ G + A E G S N++I AE ++
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMI 384
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+++ EKG + ++ ++ GY ++ F L+ G KP K TS+L
Sbjct: 385 KEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLA-----SGIKPTKKTYTSLLH 439
Query: 426 KLGDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGID 481
L + +++ + + + V+P + M++A I + N KG ELL M +
Sbjct: 440 VLSKKNRMKEADDLFKKITSEGVLP-DAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVP 498
Query: 482 EDEET 486
DE T
Sbjct: 499 PDEVT 503
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 122/260 (46%), Gaps = 7/260 (2%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY +L++ +++TD+A ++++E GI+ +TYN ++ Y + +K +
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLH 419
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM A I P +Y ++ ++ ++ + + +++ S+ ++ D + + +
Sbjct: 420 DEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE-GVLPDAIMFNALIDGHCS 478
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ + A ++LK + D + +N ++ + G E L+D K +R I D
Sbjct: 479 NSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMK---RRGIKPD 535
Query: 310 YI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+I T++ + G+ ++A +V E +G + NA++ G C N AE +L+
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLK 595
Query: 367 DLVEKGKATTPNSWAVVAAG 386
++V KG ++ + G
Sbjct: 596 EMVSKGMTPDDTTYFTLIEG 615
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 183/441 (41%), Gaps = 30/441 (6%)
Query: 58 NKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSA 117
NK+ + + + ++ +R + ++L + +M R+ C H + + L+GR
Sbjct: 94 NKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKC 153
Query: 118 ESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCL 175
F + + +T +Y A++N Y R Q +L MK+ ++ S LTYN ++
Sbjct: 154 REVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINA 213
Query: 176 YSKTG-QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
++ G +E + + EM+ + I PD +Y + + R + E++ R M ++ IV
Sbjct: 214 CARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTM-NESGIV 272
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
D +TY+ + K N ++K S++L++ E D YN L+ YA LG+ E + +
Sbjct: 273 PDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGV 332
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
+ + A Y +L K G +++ + E ++S D N +I +
Sbjct: 333 FRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGE 392
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG--FQCMKAALS------- 405
G + + D+ E+ PN +T G F C K L
Sbjct: 393 GGYFKEVVTLFHDMAEEN--VEPNM------------QTYEGLIFACGKGGLYEDAKKIL 438
Query: 406 VYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP-MNRQMYHAFIKANIRN 464
+++ KG P K T ++ G ++ + V + Y++ I A R
Sbjct: 439 LHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARG 498
Query: 465 G--KGVDELLDSMKADGIDED 483
G K + +L M G+ D
Sbjct: 499 GLYKEAEAILSRMNESGLKRD 519
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 10/277 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y LL Y +A+ FR+M+ G + TY+ ++ LY K G+Y+ V D+ EM
Sbjct: 312 SYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEM 371
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K N PD +Y I I +G + + + +M ++ ++ + TY K L
Sbjct: 372 KVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDM-AEENVEPNMQTYEGLIFACGKGGL 430
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A +L E+ Y +I + E L +++ Y +
Sbjct: 431 YEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNS 490
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ A + G ++EAE +L SG D N VI + G Q EA+ + VE
Sbjct: 491 LIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGG--QYEEAV-KSYVEME 547
Query: 373 KATT-PNSWAV--VAAGYFDAGKTERG---FQCMKAA 403
KA PN + V + Y AG + G FQ +KA+
Sbjct: 548 KANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKAS 584
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 177/450 (39%), Gaps = 62/450 (13%)
Query: 35 IISPLGNPGT--RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKG 92
+I+ LG G + D NG V II + +F +LE+ + M ++
Sbjct: 140 MITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQER 199
Query: 93 I--------CVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQ 144
+ V C LD G + F AE ++ D TY T LL +
Sbjct: 200 VSPSILTYNTVINACARG-GLDWEGLLGLF--AEMRHEGIQPDVITYNT---LLGACAHR 253
Query: 145 RQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSY 204
D+A FR M E GI TY+ ++ + K + EKV ++L EM+ PD SY
Sbjct: 254 GLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSY 313
Query: 205 RICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE 264
+ + +Y ++ + R+M++ V + +TY+ + Y K D D+ + +
Sbjct: 314 NVLLEAYAELGSIKEAMGVFRQMQAA-GCVANAATYSVLLNLYGKHGRYDDVRDLFLEMK 372
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKT--------------ACKR----- 304
D YN LI ++ G EV+ L+ D+ + AC +
Sbjct: 373 VSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYE 432
Query: 305 -------YIN--------RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
++N + Y ++EA + +EEA + G++ N++I
Sbjct: 433 DAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLI 492
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
+ GL + AEAIL + E G +S+ V + G+ E + V +E
Sbjct: 493 HAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSY-----VEME 547
Query: 410 GKGWKPDPKVITSILS-----KLGDEGSVQ 434
+P+ + ++LS L DEG Q
Sbjct: 548 KANCEPNELTLEAVLSIYCSAGLVDEGEEQ 577
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 106/249 (42%), Gaps = 7/249 (2%)
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD--DEKTYQTYGALLNCYVRQR 145
MN KG+ + V ++ G+ + A F+ + + T +TY +L++ + R
Sbjct: 441 MNEKGVVPSSKAYTGV-IEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGG 499
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
+A + +M E G+ ++N ++ + + GQYE+ EM+ N P+ +
Sbjct: 500 LYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLE 559
Query: 206 ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA-E 264
++ Y + ++ E +E+++ I+ Y Y K + ++ A +++
Sbjct: 560 AVLSIYCSAGLVDEGEEQFQEIKAS-GILPSVMCYCMMLALYAKNDRLNDAYNLIDAMIT 618
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKLGEH 323
R+ + + + N V ++D L C + R Y +LEAL + +
Sbjct: 619 MRVSDIHQVIGQMIKGDFDDESNWQIVEYVFDKLNSEGCGLGM-RFYNALLEALWCMFQR 677
Query: 324 EEAEKVLKE 332
E A +VL E
Sbjct: 678 ERAARVLNE 686
>gi|302798905|ref|XP_002981212.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
gi|300151266|gb|EFJ17913.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
Length = 414
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 182/438 (41%), Gaps = 60/438 (13%)
Query: 65 LQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL 124
L +I LR +F QA E+ DWM R + DH + L+L+GR+ F A F +
Sbjct: 6 LLNVIYKLRITAKFGQAREICDWMIRNKVFEIEESDHVLLLELVGRISKF-QATRCFWEM 64
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
+ ++ Y A+L + R A +MK + + YN ++ +Y + + +K
Sbjct: 65 PAELRSEDAYTAMLQVFARWHAIPAAEDTMSEMKSLNLITRVEPYNIMLDMYKRKNEDDK 124
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
V + E+ + + PD +Y I + + +G+E
Sbjct: 125 VRAMYDELSSLGVAPDAHTYLIVLRAKQKIGGFDGIE----------------------- 161
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIG-YNFLISLYASLGNKSEVLRLWDLEKTACK 303
++V K +E+L + + Y ++ +Y L + + + L + K
Sbjct: 162 ------------AEVRKFLDEQLTSRQPLFIYECMLRIYTLLRDLAAIENLRSILLKTFK 209
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN--AVIIGYCNNGLVQNA 361
++ + Y +L++ +LGE E AE++ E GN + I + A+I Y +NG ++ A
Sbjct: 210 KFSSSSYNCLLDSYRQLGEVERAERLFNE---IGNKFTLNIQSYRAMIAVYASNGRMEKA 266
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW------KP 415
+ + L G P + + AGY DA AL Y GK W P
Sbjct: 267 NELYKQLFRAGFECHPAIYHAMVAGYIDARDHSN-------ALIQY--GKAWDRSLLGHP 317
Query: 416 DPKVITS--ILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGKGVDELL 472
P T+ +L L ++G E+ V L R + ++Y+ +KA I+ V
Sbjct: 318 KPLRATTLLVLRVLAEQGDFSRAESIVRDLKRERQGSDVEVYNWLLKAYIKAEVPVFGFD 377
Query: 473 DSMKADGIDEDEETKEIL 490
M A G+ ++E+ E+L
Sbjct: 378 GRMLAAGVRPNDESLELL 395
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 165/372 (44%), Gaps = 22/372 (5%)
Query: 28 NKTTLYSIISPLGNPGTRIEPEL---DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEV 84
N T ++++ GN G +++ L D K+G V I+ L K+ RF+ LE+
Sbjct: 348 NAFTYNTVMTAYGNIG-KVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEM 406
Query: 85 SDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT------YQTYGALL 138
M+R G C + V + + V G E Y + + + K+ TY L+
Sbjct: 407 LGEMSRSG-CT----PNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLI 461
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
Y R A + +M G A TYN ++ + S+ G + ++++M+ K
Sbjct: 462 AAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFK 521
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
P++ SY + + Y ++ G++ I +E+ + W + K +
Sbjct: 522 PNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGG-TVFPSWVILRTLVIANFKCRRLGGIEK 580
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLE 315
++ + R D + +N ++S+YA G S+V ++D K + ++ D IT +++
Sbjct: 581 AFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIK---QSGLSPDLITYNSLMD 637
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKAT 375
K E EAEK+L + + S D N VI G+C GL++ A+ IL +++ G A
Sbjct: 638 MYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAP 697
Query: 376 TPNSWAVVAAGY 387
++ + GY
Sbjct: 698 CVVTYHTLVGGY 709
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 170/427 (39%), Gaps = 60/427 (14%)
Query: 57 GNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHG- 113
G+++ V ++ L + R+ +A+E+ + R+G+ AP + V LD+ GR+
Sbjct: 168 GSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGV---APTLVTYNVVLDVYGRMGRS 224
Query: 114 -----FLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLT 168
L E + ++ D+ T T ++ R D+A++ F +K G +T
Sbjct: 225 WPRIVALLDEMRAAGVEPDDFTAST---VIAACCRDGLVDEAVAFFEDLKARGHTPCVVT 281
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
YN ++ ++ K G Y + VL EM+ PD +Y ++L G
Sbjct: 282 YNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTY----------NELAGT-------- 323
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
Y +A ++A+ L + + YN +++ Y ++G
Sbjct: 324 ------------------YARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKV 365
Query: 289 SEVLRLWD-LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
E L L+D ++K+ C +N Y +L L K ++L E SG + + N
Sbjct: 366 DEALALFDQMKKSGCVPNVN-TYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNT 424
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
++ G+ +LE + G + +++ + A Y G F+ S
Sbjct: 425 MLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSA- 483
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK 466
G+ P ++L+ L +G ++ V+ +RT N Q Y ++ + G
Sbjct: 484 ----GFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGN 539
Query: 467 --GVDEL 471
G+D +
Sbjct: 540 IAGIDAI 546
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 7/130 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ ++L+ Y + K F +K+ G++ +TYN +M +Y+K + + +L ++K
Sbjct: 597 FNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLK 656
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKA 250
+ + PD SY IN + + ++ + IL EM + P +V TY + Y
Sbjct: 657 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVV----TYHTLVGGYASL 712
Query: 251 NLIDKASDVL 260
+ +A +V+
Sbjct: 713 EMFSEAREVI 722
>gi|297849054|ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338250|gb|EFH68667.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 199/464 (42%), Gaps = 31/464 (6%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA 102
G + L +W+ +G V G++ I LRK R +ALE+ +W+ R+ +++
Sbjct: 80 GVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRPGELEYS 139
Query: 103 VQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
L+ ++HG E F+ + + + Y L+ + Q AL + +KM+E+G
Sbjct: 140 YLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGY 199
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
S L YN ++ S G+ + + L MKA P +Y I + +++G+
Sbjct: 200 RTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLK 259
Query: 223 ILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
M+ +P+ V +Y A + A L A ++ E+ + + + L+
Sbjct: 260 AFDGMKKAGVEPNEV----SYCILAMAHAVARLYTVAEAYTEEIEKSVTGNNWSTLDILM 315
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
LY LG + E++R W++ + ++ Y+ EA ++G + AE++ E +
Sbjct: 316 ILYGRLGKEKELVRTWNVIR-GFHHVRSKSYLLATEAFAQVGNLDRAEELWLEMKNVRGL 374
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS--WAVVAAGYFDAGKTERGF 397
+T N+++ YC +GL++ A + +++ G PNS + +A G A
Sbjct: 375 KETEQFNSLLSVYCKDGLIEKAIGVFREMM--GDGFKPNSITYRHLALGCAKA------- 425
Query: 398 QCMKAALSVYVEGKGWK---------PDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
+ MK AL G K P + SI+ ++G V++ E ++
Sbjct: 426 KLMKEALKNIEMGSNLKTSNSIRSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNA-K 484
Query: 449 MNRQ--MYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
NR +Y+A KA ++ L M G D E+ +L
Sbjct: 485 YNRYAFVYNALFKAYVKAKVYDPNLFKRMVLGGARPDAESYSLL 528
>gi|255562320|ref|XP_002522167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538605|gb|EEF40208.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 342
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 156/325 (48%), Gaps = 10/325 (3%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
MK++ ++T N ++ LY + + +K+ DVL M+ +NI P F+Y++ I++ G +D
Sbjct: 1 MKDLEFPVTTFACNQLLLLYKRLDK-KKIADVLLLMEKENIKPSLFTYKLLIDTKGQSND 59
Query: 217 LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
L GM+ I+ M++ I D + A A Y L +KA +LK+ E ++
Sbjct: 60 LTGMDQIVETMKADG-IEPDINIRAILAKHYASGGLKEKAEAILKEMEGGNLEEHRWACR 118
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
L+ LYA+LG EV R+W + +++ + + + ++EA KL + ++AE+V +
Sbjct: 119 LLLPLYAALGKADEVERVWKVCESSPQL---EECVAVIEAWGKLKKIDKAEEVFNRMLTT 175
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
+R +A++ Y ++ ++ N + +++ + + G P +W + Y +AG+ E+
Sbjct: 176 WKKLSSRHYSALLKVYASHKMLANGKDLIKKMADSGCRIGPLTWDSLVKLYVEAGEVEKA 235
Query: 397 FQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-QMYH 455
+ A + KP I+ + G V + E +R + R + +
Sbjct: 236 DSVLHKA----AQQNHMKPMFSSYIVIMDQYAKRGDVHNAEKMFHRMRQAGYVARLRQFQ 291
Query: 456 AFIKANIRNGKGVDELLDSMKADGI 480
A ++ I + + MKAD I
Sbjct: 292 ALVQTYINAKAPAYGIRERMKADNI 316
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 4/145 (2%)
Query: 109 GRVHGFLSAESYFSNLKDDEKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
G++ AE F+ + K + Y ALL Y + +KM + G +
Sbjct: 157 GKLKKIDKAEEVFNRMLTTWKKLSSRHYSALLKVYASHKMLANGKDLIKKMADSGCRIGP 216
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF-SYRICINSYGARSDLEGMEIILR 225
LT++ ++ LY + G+ EK VL + +N F SY + ++ Y R D+ E +
Sbjct: 217 LTWDSLVKLYVEAGEVEKADSVLHKAAQQNHMKPMFSSYIVIMDQYAKRGDVHNAEKMFH 276
Query: 226 EMESQPHIVLDWSTYASAAHFYIKA 250
M Q V + + YI A
Sbjct: 277 RMR-QAGYVARLRQFQALVQTYINA 300
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 169/405 (41%), Gaps = 27/405 (6%)
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDK 149
G+CV D A+ L F +KDDE T +TY L+ + +
Sbjct: 297 GLCVARRIDEAMDL---------------FVKMKDDECFPTVRTYTVLIKSLCGSERKSE 341
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
AL+ ++M+E GI + TY ++ ++EK ++L +M K + P+ +Y IN
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
Y R +E ++ MES+ + + TY Y K+N + KA VL K ER
Sbjct: 402 GYCKRGMIEDAVDVVELMESR-KLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVL 459
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
D + YN LI GN RL L Y +M+++L K EEA +
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
E G + + + A+I GYC G V A +LE ++ K ++ + G
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA-FVAALRTVIP 448
GK + + + + G +P T ++ +L +G + F L +
Sbjct: 580 DGKLKEATLLEEKMVKI-----GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 449 MNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
+ Y FI+ R G+ +D +++ M+ +G+ D T L+
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 131/300 (43%), Gaps = 15/300 (5%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY L+ Y + KA+ KM E + +TYN ++ ++G ++ +L+
Sbjct: 429 RTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYI 248
M + + PD ++Y I+S +E + +E + P++V+ Y + Y
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM----YTALIDGYC 543
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYIN 307
KA +D+A +L+K + + + +N LI + G E L + + K + ++
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
D I ++ L+K G+ + A ++ SG D I YC G + +AE ++
Sbjct: 604 TDTI-LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ E G + +++ + GY D G+T F +K + G +P S++ L
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR-----MRDTGCEPSQHTFLSLIKHL 717
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 112/255 (43%), Gaps = 3/255 (1%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y LLN R D+ + +M E + + TYN ++ Y K G E+ ++++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ PD F+Y I Y R DL+ + EM + + Y H A I
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK-GCRRNEVAYTHLIHGLCVARRI 304
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYIT 312
D+A D+ K ++ Y LI KSE L L ++E+T K I+ Y
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT-YTV 363
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++++L + E+A ++L + G + NA+I GYC G++++A ++E + +
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 373 KATTPNSWAVVAAGY 387
+ ++ + GY
Sbjct: 424 LSPNTRTYNELIKGY 438
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 109/289 (37%), Gaps = 18/289 (6%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+ T T L++ ++ D A S F++M G TY + Y + G+ D
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM-----ESQPHIVLDWSTY-- 240
++ +M+ + PD F+Y I YG +L+ M E H L +
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 241 --------ASAAHFYIKANLI--DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
S +N++ D ++L+K E + Y LI +GN
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778
Query: 291 VLRLWD-LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+++D +++ + +L KL +H EA KV+ + G+ +I
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
G G + ++ ++L++ G +W ++ G G E ++
Sbjct: 839 CGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 139/345 (40%), Gaps = 21/345 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++N Y + ++A + K+ E G+ TY ++ Y + + V EM
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
Query: 193 KAKNIFPDNFSYRICINSYG-ARSDLEGMEII--LREMESQPHIVLDWSTYASAAHFYIK 249
K + +Y I+ AR E M++ +++ E P + TY
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTV----RTYTVLIKSLCG 335
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN--KSEVLRLWDLEKTACKRYIN 307
+ +A +++K+ EE + + Y LI S K+ L LEK I
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y ++ K G E+A V++ E S +TR N +I GYC + V A +L
Sbjct: 396 --YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNK 452
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
++E+ ++ + G +G + ++ L + +G PD TS++ L
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYR-----LLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 428 GDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVDE 470
V++ +L + V P N MY A I + GK VDE
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNP-NVVMYTALIDGYCKAGK-VDE 550
>gi|449457827|ref|XP_004146649.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 204
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 87/150 (58%), Gaps = 4/150 (2%)
Query: 259 VLKKAEERLE--QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
+LKK+E L +K G +N + LYA G K E+ R+W+L K ++ N+ +I+M+ +
Sbjct: 1 MLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK--EKIFNKGFISMITS 58
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
L L + + AE++ KEWE SYD RIPN ++ YC GL++ AE +L ++V + +
Sbjct: 59 LFVLDDIKGAERIYKEWETQKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFS 118
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSV 406
SW +A+GY + + + +K A SV
Sbjct: 119 VESWCYLASGYLQKDQLPQAVETLKLAASV 148
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 160/373 (42%), Gaps = 22/373 (5%)
Query: 28 NKTTLYSIISPLGNPGTRIEPEL---DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEV 84
N T ++++ GN G +++ L D K G V ++ L K+ RF+ LE+
Sbjct: 349 NAFTYNTVMTAYGNVG-KVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEM 407
Query: 85 SDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD------EKTYQTYGALL 138
M+R G C + V + + V G E Y + + + E + TY L+
Sbjct: 408 LGEMSRSG-CT----PNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLI 462
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
Y R A + +M G TYN ++ + S+ G + ++++M+ K
Sbjct: 463 AAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFK 522
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
P+ SY + + Y ++ G+ I E+ + W + K +D
Sbjct: 523 PNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMET 582
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLE 315
++ + R D + +N ++S+YA G S+ ++D K + ++ D IT +++
Sbjct: 583 AFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIK---RSGLSPDLITYNSLMD 639
Query: 316 ALMKLGEHEEAEKVLKEWELSGN-SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
K E EAEK+L + + S D N VI G+C GLV+ A+ +L ++V G A
Sbjct: 640 MYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMA 699
Query: 375 TTPNSWAVVAAGY 387
++ + GY
Sbjct: 700 PCAVTYHTLVGGY 712
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 167/419 (39%), Gaps = 58/419 (13%)
Query: 57 GNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHG- 113
G+++ V ++ L + R+ +ALE+ + R+G+ AP + V LD+ GR+
Sbjct: 169 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGV---APTLVTYNVVLDVYGRMGRS 225
Query: 114 -----FLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLT 168
L E + ++ D T T ++ R D+A++ F +K G A +T
Sbjct: 226 WPRIVALLDEMRAAGVEPDGFTAST---VIAACCRDGLVDEAVAFFEDLKARGHAPCVVT 282
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
YN ++ ++ K G Y + VL EM+ PD +Y ++L G
Sbjct: 283 YNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTY----------NELAG--------- 323
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
TYA A F ++A+ L + + YN +++ Y ++G
Sbjct: 324 ----------TYARAGFF-------EEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKV 366
Query: 289 SEVLRLWD-LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
E L L+D ++KT +N Y +L L K ++L E SG + + N
Sbjct: 367 DEALALFDQMKKTGFVPNVN-TYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNT 425
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
++ G+ +LE + G + +++ + A Y G F+ S
Sbjct: 426 MLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSA- 484
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG 465
G+ P ++L+ L +G ++ V+ +RT N Q Y ++ + G
Sbjct: 485 ----GFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGG 539
>gi|15218232|ref|NP_175000.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75268143|sp|Q9C545.1|PPR72_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g43010
gi|12321535|gb|AAG50822.1|AC026757_3 hypothetical protein [Arabidopsis thaliana]
gi|12323053|gb|AAG51513.1|AC068324_1 hypothetical protein [Arabidopsis thaliana]
gi|332193817|gb|AEE31938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 257
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 114/243 (46%), Gaps = 8/243 (3%)
Query: 15 NAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRK 74
N +F R Y T TL S I N I P L+ W K G +V L+ +I++L
Sbjct: 21 NCLFRRSYETLPAANQTLPSRIKTDINQKASIIPLLEQWRKQGYEVNPSHLRGLIKNLSD 80
Query: 75 RKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTY 134
K F+ ALE S WM + + P D A QL L+ V G AE F N+ + + Y
Sbjct: 81 CKNFTTALEASKWMFKHSVFDNFPEDCAAQLHLVNTVLGLEEAEKMFKNIPEK---MRDY 137
Query: 135 GALLNCYVRQ-RQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
LL+ Y + R DKA + F+KM+E+G L +N ++CLY + + + V +L ++K
Sbjct: 138 SVLLSSYTKPVRTVDKAEATFKKMRELGFLLKPYLFNSMICLYGQLQRLDMVEKLLYKLK 197
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
N+ + Y + +E + + S+ I L+ T + A Y +A I
Sbjct: 198 KNNMEVGSLKVNNVSRVYANINAMEKFKTWV----SKEGIELERDTIVAMAKAYHRAGSI 253
Query: 254 DKA 256
+KA
Sbjct: 254 EKA 256
>gi|218200516|gb|EEC82943.1| hypothetical protein OsI_27919 [Oryza sativa Indica Group]
Length = 500
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 149/323 (46%), Gaps = 2/323 (0%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+ W+ +G V G + + LR+R+ AL+V +W+ R+ + D++ L+
Sbjct: 69 IRGWMGDGRAVHRGHVFHAVNRLRRRRLHRAALQVMEWIMRERPYKLSELDYSYLLEFTA 128
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+VHG AES F + + + Y L+ + A + RKM+E+ + +S Y
Sbjct: 129 KVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELSLPISPYVY 188
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ L+S G+ + + +L +MK + P +Y I + +++G+ + +M+
Sbjct: 189 NRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVARVFNDMK- 247
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + + TY A + A L + ++ E + + L+ LY G
Sbjct: 248 RAKVEPNEITYGILAIAHAVARLYTVSHTYVEAIENSMTGTNWSTLEILLILYGYHGKAK 307
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
E+ WDL + + +I +EA K+G ++AE++ ++E + T N+++
Sbjct: 308 ELKMTWDLMQ-GLPHIRPKSFILAIEAFGKVGSIDQAEEIWGKFESTRKPKLTEQFNSIL 366
Query: 350 IGYCNNGLVQNAEAILEDLVEKG 372
YC +GLV A A+ +++ G
Sbjct: 367 SVYCRHGLVDKASAVFKEMRANG 389
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 180/397 (45%), Gaps = 27/397 (6%)
Query: 108 IGRVHGFLSAESYFSNL-----KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+G+V F A F ++ + D+ TY T ++N + +T A F+KM+E G
Sbjct: 55 LGKVGKFAQAVELFDDMVARGCQPDDYTYTT---IINGLCKIGETALAAGLFKKMEEAGC 111
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
L+ +TY+ ++ K + + D+ + MKAK+I P F+Y I S +
Sbjct: 112 QLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASA 171
Query: 223 ILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+L EM S P++V T+ + K + A VLK E + D + YN L+
Sbjct: 172 LLNEMTSLNIMPNVV----TFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLM 227
Query: 280 SLYASLGNKSEVLRLWDLEKT-ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
Y+ E +L+D+ T CK + Y ++ K +EA+++ E G+
Sbjct: 228 YGYSMWTEVVEARKLFDVMITKGCKPDV-FSYSILINGYCKAKRIDEAKQLFNEMIHQGS 286
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ + N +I G C G ++ A+ + +++ G ++A++ G+ G + F+
Sbjct: 287 TPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFR 346
Query: 399 CMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAF 457
+A S Y+ KP+ + +++ + G+++D + L + + N Q+Y
Sbjct: 347 LFRAMQSTYL-----KPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTI 401
Query: 458 IKANIRNGKGVDELLDS---MKADGIDEDEETKEILV 491
I + G +DE L++ M+ DG DE + +++
Sbjct: 402 INGLCKEGL-LDEALEAFRNMEDDGCPPDEFSYNVII 437
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 139/347 (40%), Gaps = 30/347 (8%)
Query: 57 GNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLS 116
G ++ V +I L K +R ++AL++ +M K I +P I +
Sbjct: 110 GCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDI---SP--------TIFTYTSLIQ 158
Query: 117 AESYFSNLKD-----DEKT-------YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIAL 164
FS K+ +E T T+ L++ + ++ + A + M EMG+
Sbjct: 159 GLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEP 218
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIIL 224
+TYN +M YS + + + M K PD FSY I IN Y ++ + +
Sbjct: 219 DVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLF 278
Query: 225 REMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
EM Q P+ V +Y + H + + +A D+ K + Y L+
Sbjct: 279 NEMIHQGSTPNNV----SYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDG 334
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+ G + RL+ ++ + Y ++ A+ K G ++A ++ E + G +
Sbjct: 335 FCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPN 394
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+I +I G C GL+ A ++ + G S+ V+ G+
Sbjct: 395 VQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFL 441
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 130/314 (41%), Gaps = 8/314 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T L+NC+ + ++ D S K ++G+ + +T+ ++ K G++ + ++ +M
Sbjct: 12 TLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDM 71
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
A+ PD+++Y IN + + ++ME + L+ TY++ H K
Sbjct: 72 VARGCQPDDYTYTTIINGLCKIGETALAAGLFKKME-EAGCQLNVVTYSTLIHSLCKYRR 130
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-RDYI 311
+++A D+ + + Y LI + E L + E T+ N +
Sbjct: 131 VNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLN-EMTSLNIMPNVVTFN 189
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+++ K G+ AE VLK G D N+++ GY V A + + ++ K
Sbjct: 190 VLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITK 249
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G S++++ GY A + + Q + +G P+ +++ L G
Sbjct: 250 GCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIH-----QGSTPNNVSYNTLIHGLCQLG 304
Query: 432 SVQDVEAFVAALRT 445
+++ + + T
Sbjct: 305 RLREAQDLFKNMHT 318
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 166/363 (45%), Gaps = 23/363 (6%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ + + D AL+ F++M+ GI + +TY+ ++ G++ +L++M
Sbjct: 259 YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKA 250
+ I PD F++ I+++ L E + EM + P IV TY+S + +
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV----TYSSLINGFCMH 374
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI---N 307
+ +D+A + + + D + Y+ LI + E + L+ + +R +
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELF---REMSQRGLVGNT 431
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+++ L + G+ + A+++ KE G + N ++ G C NG ++ A + E
Sbjct: 432 VTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
L T ++ ++ G AGK E G+ L + KG KPD +++S
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD-----LFCNLSLKGVKPDVVAYNTMISGF 546
Query: 428 GDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
+GS ++ +A ++ +P N Y+ I+A +R+G + EL+ M++ G D
Sbjct: 547 CRKGSKEEADALFKEMKEDGTLP-NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Query: 484 EET 486
T
Sbjct: 606 AST 608
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 180/427 (42%), Gaps = 52/427 (12%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAV------------QLDLIGRV 111
E +++ + K +F + + + M G+ P +H QL L V
Sbjct: 83 EFSKLLSAIAKMNKFDVVISLGEQMQNLGM----PHNHYTYSILINCFCRRSQLPLALAV 138
Query: 112 HGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
G + Y E T +LLN Y ++ +A++ +M G +T+T+N
Sbjct: 139 LGKMMKLGY-------EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191
Query: 172 I---MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
+ + L++K + + D M AK PD +Y + +N R D + I+L +ME
Sbjct: 192 LIHGLFLHNKASEAVALID---RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKME 248
Query: 229 S---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
+P +++ Y + K +D A ++ K+ E + + + + Y+ LIS +
Sbjct: 249 QGKLEPGVLI----YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 286 GNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
G S+ RL +R IN D T +++A +K G+ EAEK+ E+ S D
Sbjct: 305 GRWSDASRLL---SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD--EMVKRSIDP 359
Query: 343 RIP--NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCM 400
I +++I G+C + + A+ + E +V K S++ + G+ A + + G +
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELF 419
Query: 401 KAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIK 459
+ + +G + T+++ L G E F + +P N Y+ +
Sbjct: 420 RE-----MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Query: 460 ANIRNGK 466
+NGK
Sbjct: 475 GLCKNGK 481
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 120/250 (48%), Gaps = 9/250 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ AL++ +V++ + +A + +M + I S +TY+ ++ + + ++ + M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 193 KAKNIFPDNFSYRICINSY--GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+K+ FPD SY I + R D EGME + REM SQ +V + TY + +A
Sbjct: 388 VSKHCFPDVVSYSTLIKGFCKAKRVD-EGME-LFREM-SQRGLVGNTVTYTTLIQGLFQA 444
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRD 309
D A ++ K+ + + YN L+ G + + +++ L+++ + I
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI-YT 503
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y M+E + K G+ E+ + L G D N +I G+C G + A+A+ +++
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 370 EKGKATTPNS 379
E G T PNS
Sbjct: 564 EDG--TLPNS 571
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 147/356 (41%), Gaps = 51/356 (14%)
Query: 26 RINKTTLYSIISPLGNPGT--------------RIEPE-------LDNWVKNGNKVRVGE 64
R N T S+IS L N G +I P+ +D +VK G V E
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV---E 344
Query: 65 LQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL 124
+++ ++ KR + S +N G C+ D A Q+ F+ ++ F ++
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLIN--GFCMHDRLDEAKQM------FEFMVSKHCFPDV 396
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
+Y L+ + + ++ D+ + FR+M + G+ +T+TY ++ + G +
Sbjct: 397 -------VSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDM 449
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII---LREMESQPHIVLDWSTYA 241
++ EM + + P+ +Y ++ LE ++ L+ + +P I TY
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY----TYN 505
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
KA ++ D+ + + D + YN +IS + G+K E L+ K
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
+ Y T++ A ++ G+ E + +++KE G + D A IG N L
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD-----ASTIGLVTNML 616
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 177/426 (41%), Gaps = 64/426 (15%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKG--ICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK 125
II+ L +F AL + D++ + + + AV + ++G+ A S NL+
Sbjct: 112 IIKGLGFNNKFDLALSLFDFIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLHNLE 171
Query: 126 DDEKTYQTYG--ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ-- 181
D YG +L+ Y ++ AL F KMKE+G + +TYN I+ +Y K G
Sbjct: 172 ADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPW 231
Query: 182 ----------------------------------YEKVPDVLTEMKAKNIFPDNFSYRIC 207
YE+ D+ E+K PD +Y
Sbjct: 232 AKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNAL 291
Query: 208 INSYG-ARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
++ YG +R E ME +L++MES +P +V TY S Y++ L++ A + +K
Sbjct: 292 LDVYGKSRRPKEAME-VLKQMESNSFRPSVV----TYNSLVSAYVRGGLLEDALVLKRKM 346
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKL-- 320
++ + D Y L+S + + G + + ++ ++ K CK I AL+K+
Sbjct: 347 VDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCK-----PNICTFNALIKMYG 401
Query: 321 --GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
G+ EE KV KE ++ S D N ++ + NG+ + E++ A +
Sbjct: 402 DRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERD 461
Query: 379 SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA 438
++ + + Y G ++ K L G PD ++L+ L G + E
Sbjct: 462 TFNTLISAYGRCGSFDQAMAAYKRMLEA-----GVSPDLSTYNAVLATLARGGLWEQSEK 516
Query: 439 FVAALR 444
+A ++
Sbjct: 517 VLAEMK 522
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 5/170 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T A+L+ Y R++ KA M E G+ LS +YN +M +YS+T + K + E+
Sbjct: 602 TSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREI 661
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K I PD SY I I +Y ++ + I+ EM+ P V D TY + Y ++
Sbjct: 662 LDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKV-PAPVPDVVTYNTFIAAYAADSM 720
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE----VLRLWDLE 298
+A DV++ ++ + + YN ++ Y L + E V L DL+
Sbjct: 721 FVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQNLGDLD 770
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 126/302 (41%), Gaps = 18/302 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L++ YVR + AL RKM + GI TY ++ + G+ E +V EM
Sbjct: 322 TYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEM 381
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+ P+ ++ I YG R E M + +E+ + P IV W+T + + +
Sbjct: 382 RKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIV-TWNTLLAV---FGQ 437
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ + S V ++ + + +N LIS Y G+ + + + A
Sbjct: 438 NGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLST 497
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +L L + G E++EKVL E + G + ++++ Y N V+ A+ E++
Sbjct: 498 YNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIY 557
Query: 370 E---KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
K A + +V + +TER F + +G PD ++LS
Sbjct: 558 SGTIKTHAVLLKTLVLVNSKVDLLVETERAF--------LEFRKRGISPDVTTSNAMLSI 609
Query: 427 LG 428
G
Sbjct: 610 YG 611
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 133/311 (42%), Gaps = 25/311 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ Y R D+A++ +++M E G++ TYN ++ ++ G +E+ VL EM
Sbjct: 462 TFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEM 521
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
K P+ +Y +++Y ++E M + E+ S + H VL + K
Sbjct: 522 KDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVL----LKTLVLVNSK 577
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+L+ + + +R D N ++S+Y G K V + ++ + +
Sbjct: 578 VDLLVETERAFLEFRKRGISPDVTTSNAMLSIY---GRKKMVPKANEILNFMYESGLTLS 634
Query: 310 YITMLEALMKLGEHEE----AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+T +LM + E +E++ +E G D N VI YC N ++ A+ I+
Sbjct: 635 -LTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRII 693
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
E++ K A P+ VV F A + Y+ +G KP+ SI+
Sbjct: 694 EEM--KVPAPVPD---VVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVD 748
Query: 426 -----KLGDEG 431
KL DE
Sbjct: 749 WYCKLKLRDEA 759
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 16/266 (6%)
Query: 154 FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG- 212
F ++K G+AL+ +YN ++C ++K G +KV +V+ EM + + PD FS+ I +Y
Sbjct: 86 FLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAM 145
Query: 213 ARSDLEGMEII--LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
+R G+++ ++ P IV TY + + ++++ +A ++ ++ Q
Sbjct: 146 SRKPERGLQVFSNMKAAGVLPDIV----TYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQP 201
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
D Y+ L+S+Y G ++ L ++ + R Y +++ A + G EE+ K
Sbjct: 202 DFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHF 261
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+ E G D + N +I Y G+V +A +L L +G S+A++ G+ A
Sbjct: 262 SQMEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFLHA 321
Query: 391 GKTERGFQCMKAALSVY--VEGKGWK 414
G E AL+ Y + G G+K
Sbjct: 322 GHVEE-------ALAAYASMSGAGFK 340
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 9/198 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
++ AL+ Y R+ ++ L F MK G+ +TY ++ ++S++ +++ ++ EM
Sbjct: 135 SFNALIAAYAMSRKPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSSMHKEAIEMFEEM 194
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIK 249
PD F Y + ++ YG + +I ++ +P+IV TY S ++
Sbjct: 195 VVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIV----TYTSLISAHLH 250
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR- 308
L++++ + E + D N +I YA G ++ L TA NR
Sbjct: 251 KGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLH-RLTAQGVCPNRA 309
Query: 309 DYITMLEALMKLGEHEEA 326
Y ++E + G EEA
Sbjct: 310 SYAIIVEGFLHAGHVEEA 327
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 181/398 (45%), Gaps = 33/398 (8%)
Query: 84 VSDWMNRKGICVFAPCDHAVQ--LDLIGRVHG----FLSAESYFSNLKDDEKTYQTYGAL 137
VSD ++ C F P H V+ D++ RV F A F + EK G
Sbjct: 98 VSDVVSLVDECEFEP--HFVETLCDMLFRVCADNRMFRDALKVFDYVM--EKGLVVEGR- 152
Query: 138 LNCYVRQ-RQTDKALSHFRKMKEMG---IALSTLT-YNDIMCLYSKTGQYEKVPDVLTEM 192
+C+ ++ + + + FR+M E G I + +LT D++C + G+ + +++ EM
Sbjct: 153 -SCFXKKCNKVELCVRFFRRMVESGRVDIGVQSLTIVVDVLC---RRGEVGRAKELMNEM 208
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
A+ + P F+Y +N+ R D EG++ IL ME + +V TY +Y +
Sbjct: 209 AARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMERE-GVVASLVTYTILIEWYASSER 267
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI--NRDY 310
I +A V ++ ER + D Y +IS GN L+D + C+ + +
Sbjct: 268 IGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFD--EMICRGIVPNTXTF 325
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++ + K G+ E AE +L+E + G + I N ++ GYC G++ A + + +
Sbjct: 326 GALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMER 385
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
KG ++ ++A+G + E K L+V VE KG P+ + + E
Sbjct: 386 KGFEADVFTYNILASGLCKLHRYEEA----KRVLNVMVE-KGVAPNVVTCATFIEIYCQE 440
Query: 431 GSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGK 466
G++ + E F+ + R V+P N Y+ I A +N K
Sbjct: 441 GNLAEPERFLRNIEKRGVVP-NIVTYNTLIDAYSKNEK 477
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 120/301 (39%), Gaps = 10/301 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ Y + +A + +M E + + Y ++ + G + + EM
Sbjct: 254 TYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEM 313
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ I P+ ++ I+ +E EI+L EM+ + + L+ + + Y K +
Sbjct: 314 ICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCK-GVDLNVVIFNTMMDGYCKRGM 372
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+D+A + E + + D YN L S L E R+ + +EK +
Sbjct: 373 MDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVT--C 430
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T +E + G E E+ L+ E G + N +I Y N V+ A + ++VE
Sbjct: 431 ATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVE 490
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
KG ++ + G K + + L KG + + K T+I+S L E
Sbjct: 491 KGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLV-----KGIRGNVKTYTAIISGLSKE 545
Query: 431 G 431
G
Sbjct: 546 G 546
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 144/355 (40%), Gaps = 15/355 (4%)
Query: 83 EVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--KDDEKTYQTYGALLNC 140
E+ M R+G+ V + + + ++ AE + + ++ E Y ++++
Sbjct: 238 EILGLMEREGV-VASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISW 296
Query: 141 YVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD 200
R +A + F +M GI +T T+ ++ K GQ E +L EM+ K + +
Sbjct: 297 NCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLN 356
Query: 201 NFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVL 260
+ ++ Y R ++ L+++ + D TY A K + ++A VL
Sbjct: 357 VVIFNTMMDGYCKRGMMDE-AFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVL 415
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTACKRYINRDYITMLEALMK 319
E+ + + I +Y GN +E R L ++EK I Y T+++A K
Sbjct: 416 NVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNI-VTYNTLIDAYSK 474
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
+ ++A + E G D ++I G C V A + +++ KG +
Sbjct: 475 NEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKT 534
Query: 380 WAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGS 432
+ + +G G+ + AL +Y E G PD +V +++ L S
Sbjct: 535 YTAIISGLSKEGRADE-------ALKLYDEMMRMGLIPDDRVFEALVGSLHKPSS 582
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 189/499 (37%), Gaps = 82/499 (16%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++R L R R + AL V D M R+G P H + L+ R GF SA +L
Sbjct: 128 VVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVI-LEAACRGGGFRSAVRVLEDLHAR 186
Query: 128 EKTYQTYGA--LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---CL------- 175
+LN Q D+AL R + G ++YN ++ C+
Sbjct: 187 GCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 246
Query: 176 -------------------------YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+ G +E+V +VL +M PD Y I+
Sbjct: 247 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDG 306
Query: 211 YGARSDLEGMEIILREMES---QPHIV-------------------------------LD 236
LE IL M S +P++V LD
Sbjct: 307 ICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLD 366
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
T+ F+ + L+D+ ++L++ ER D I Y +I+ + G E + L
Sbjct: 367 DVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLK 426
Query: 297 LEKTACKRYINR-DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
TAC N Y +L+ L +AE ++ + G + N +I C
Sbjct: 427 -SMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 485
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
GLV+ A +L+ ++ G + S++ V G AGKT+ + L+V V KG P
Sbjct: 486 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALE----LLNVMVN-KGMSP 540
Query: 416 DPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKG--VDELL 472
+ + +SI S L EG + V + F T I + +Y+A I + + G+ E L
Sbjct: 541 NTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFL 600
Query: 473 DSMKADGIDEDEETKEILV 491
M + G +E T IL+
Sbjct: 601 AYMVSSGCVPNESTYTILI 619
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 79/214 (36%), Gaps = 15/214 (7%)
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
YN +++ Y G RL Y Y ++ AL G +A VL E
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVPVPPNAY---TYFPVVRALCARGRIADALAVLDEMP 149
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G + + + ++ C G ++A +LEDL +G A + +V D G +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE---GSVQDVEAFVAALRTVIPMNR 451
++ S G +PD ++L L G VQ E +R P N
Sbjct: 210 EALHLLRDLPSF-----GCEPDVVSYNAVLKGLCMAKRWGCVQ--ELMEEMVRMACPPNI 262
Query: 452 QMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
++ I RNG + V E+L M G D
Sbjct: 263 VTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPD 296
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 178/431 (41%), Gaps = 74/431 (17%)
Query: 75 RKRFSQALEVSDWMNRKGICVFAPCDH--AVQLDLIGR-------VHGFLSAESYFSNLK 125
++ + +ALEV +W+N + ++P A L ++G+ V F+ AES N
Sbjct: 153 QENWQRALEVFEWLNLRHW--YSPNARMLATILAVLGKANQEALAVEIFIRAESTVDN-- 208
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
T Q Y A++ Y R + +K M+E G +++N ++ K G
Sbjct: 209 ----TVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAM--T 262
Query: 186 PDV----LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWS 238
P+V L E++ + PD +Y I++ S+LE + +ME+ QP D
Sbjct: 263 PNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQP----DLW 318
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
TY + Y + KA + K+ E + D + YN L+ +A GN +V
Sbjct: 319 TYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKV------- 371
Query: 299 KTACKRYINRDYI-------TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
K C + +I T++ K G+H A ++ ++ +LSG + D +I
Sbjct: 372 KEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDS 431
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK---TERGFQCMK------- 401
+ A ++ +++ G T +++ + GY AG+ E F CM+
Sbjct: 432 LGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPD 491
Query: 402 ------------------AALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
A+ +Y E G PDP V ++L LG E V+D++ +
Sbjct: 492 QLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIR 551
Query: 442 ALRTVIPMNRQ 452
+ V MN Q
Sbjct: 552 DMEEVCGMNPQ 562
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 142/386 (36%), Gaps = 64/386 (16%)
Query: 10 NTQIHNAVFSRFYYTNRINKT--------------------TLYSIISPLGNPGTRIEPE 49
Q++NA+ + T R NK TL + G + E
Sbjct: 209 TVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIE 268
Query: 50 LDNWVK-NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLI 108
L N V+ +G + + +I + +A++V D M C + + +
Sbjct: 269 LLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAH-YCQPDLWTYNAMISVY 327
Query: 109 GRVHGFLSAESYFSNLKDDEKTY----QTYGALLNCYVRQRQTDKALSHFRKMKEMGIAL 164
GR AE F L + K Y TY +LL + R+ DK +M +MG
Sbjct: 328 GRCGFSGKAEQLFKEL--ESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIR 385
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIIL 224
+TYN I+ +Y K GQ+ + +MK PD +Y + I+S G
Sbjct: 386 DEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLG------------ 433
Query: 225 REMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
KAN + +A++V+ + + Y+ LI YA
Sbjct: 434 ------------------------KANKMVEAANVMSEMLNIGVKPTLRTYSALICGYAR 469
Query: 285 LGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
G + E +D + + R Y ML+ ++ E +A + +E G + D +
Sbjct: 470 AGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTV 529
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVE 370
A++ V++ + I+ D+ E
Sbjct: 530 YGAMLRNLGRENKVEDIQRIIRDMEE 555
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/376 (19%), Positives = 152/376 (40%), Gaps = 54/376 (14%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A + F+ + D T + LL + + ++ +++++MG +S + I+
Sbjct: 789 ARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILD 848
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
+++ + + MKA FP YRI I + +E ++ EME +
Sbjct: 849 AFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEME-EAGFR 907
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
D S + S Y + K + ++ +E Q D YN LI +Y
Sbjct: 908 PDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMY------------ 955
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
C+ + + +++ + ++G E ++Y ++I +
Sbjct: 956 -------CRDHRPEEGCSLMHEMRRIG-----------LEPKLDTY-----KSLIAAFGK 992
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG---KTERGFQCMKAALSVYVEGK 411
LV +AE + E+L+ KG + + ++ Y ++G K E+ MK A
Sbjct: 993 QQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDA-------- 1044
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRN---GKG 467
G +P + ++ G G Q+ E + L+ + + ++ Y + I A ++N G
Sbjct: 1045 GVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVG 1104
Query: 468 VDELLDSMKADGIDED 483
+ +L++ MK +G++ D
Sbjct: 1105 IQKLVE-MKKEGLEPD 1119
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
AE S +KD E T T L+ Y Q +A +KEMG++LSTL Y+ ++
Sbjct: 1034 AEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVID 1093
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDN 201
Y K Y L EMK + + PD+
Sbjct: 1094 AYLKNKDYSVGIQKLVEMKKEGLEPDH 1120
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 167/363 (46%), Gaps = 23/363 (6%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ + + D AL+ F++M+ GI + +TY+ ++ G++ +L++M
Sbjct: 873 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 932
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKA 250
+ I PD F++ I+++ L E + EM + P IV TY+S + +
Sbjct: 933 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV----TYSSLINGFCMH 988
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+ +D+A + + + D + YN LI + E + ++ + +R + +
Sbjct: 989 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF---REMSQRGLVGNT 1045
Query: 311 IT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
+T +++ L + G+ + A+++ KE G + N ++ G C NG ++ A + E
Sbjct: 1046 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 1105
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
L T ++ ++ G AGK E G+ L + KG KPD +++S
Sbjct: 1106 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD-----LFCNLSLKGVKPDVVAYNTMISGF 1160
Query: 428 GDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
+GS ++ +A ++ +P N Y+ I+A +R+G + EL+ M++ G D
Sbjct: 1161 CRKGSKEEADALFKEMKEDGTLP-NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 1219
Query: 484 EET 486
T
Sbjct: 1220 AST 1222
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 149/317 (47%), Gaps = 18/317 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y A+++ + ++ + A F++++ GI + +TY ++ + ++ +L++M
Sbjct: 296 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 355
Query: 194 AKNIFPDNFSYRICINSYGARSD-LEGMEII--LREMESQPHIVLDWSTYASAAHFYIKA 250
K I P+ +Y ++++ LE E+ + M P IV TY+S +
Sbjct: 356 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV----TYSSLINGLCLH 411
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD- 309
+ ID+A+ + + D + YN LI+ + + ++L+ + +R + +
Sbjct: 412 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF---REMSQRGLVSNT 468
Query: 310 --YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+++ + G+ ++A++ + + G S D N ++ G C+NG ++ A I ED
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 528
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ ++ ++ V G GK E + + +LS+ KG KPD T+++S L
Sbjct: 529 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWS-LFCSLSL----KGLKPDIVTYTTMMSGL 583
Query: 428 GDEGSVQDVEAFVAALR 444
+G + +VEA ++
Sbjct: 584 CTKGLLHEVEALYTKMK 600
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 145/334 (43%), Gaps = 22/334 (6%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDL 107
+D V+ G K + II L K KR + A + + RKGI P + ++
Sbjct: 281 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI---RPNVVTYTALVNG 337
Query: 108 IGRVHGFLSAESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
+ + A S++ + T TY ALL+ +V+ + +A F +M M I
Sbjct: 338 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 397
Query: 166 TLTYNDI---MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+TY+ + +CL+ + + ++ D+ M +K D SY IN + +E
Sbjct: 398 IVTYSSLINGLCLHDRIDEANQMFDL---MVSKGCLADVVSYNTLINGFCKAKRVEDGMK 454
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+ REM SQ +V + TY + + +A +DKA + + + D YN L+
Sbjct: 455 LFREM-SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 513
Query: 283 ASLGNKSEVLRLW-DLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGN 338
G + L ++ D++K R ++ D Y T++ + K G+ EEA + L G
Sbjct: 514 CDNGELEKALVIFEDMQK----REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 569
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
D ++ G C GL+ EA+ + ++G
Sbjct: 570 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 603
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 179/426 (42%), Gaps = 50/426 (11%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAV------------QLDLIGRV 111
E +++ + K +F + + + M GI P +H QL L V
Sbjct: 697 EFSKLLSAIAKMNKFDVVISLGEQMQNLGI----PHNHYTYSILINCFCRRSQLPLALAV 752
Query: 112 HGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
G + Y N+ T +LLN Y ++ +A++ +M G +T+T+N
Sbjct: 753 LGKMMKLGYEPNI-------VTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 805
Query: 172 I---MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
+ + L++K + + D M AK PD +Y + +N R D + +L +ME
Sbjct: 806 LIHGLFLHNKASEAMALID---RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 862
Query: 229 S---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
+P +++ Y + K +D A ++ K+ E + + + + Y+ LIS +
Sbjct: 863 QGKLEPGVLI----YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 918
Query: 286 GNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
G S+ RL +R IN D T +++A +K G+ EAEK+ E+ S D
Sbjct: 919 GRWSDASRLL---SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD--EMVKRSIDP 973
Query: 343 RIP--NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCM 400
I +++I G+C + + A+ + E +V K ++ + G+ + E G +
Sbjct: 974 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 1033
Query: 401 KAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKA 460
+ + G + ++ L + GD Q++ F + +P N Y+ +
Sbjct: 1034 REMSQRGLVGNTVTYN--ILIQGLFQAGDCDMAQEI--FKEMVSDGVPPNIMTYNTLLDG 1089
Query: 461 NIRNGK 466
+NGK
Sbjct: 1090 LCKNGK 1095
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 118/249 (47%), Gaps = 7/249 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ AL++ +V++ + +A + +M + I S +TY+ ++ + + ++ + M
Sbjct: 942 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 1001
Query: 193 KAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
+K+ FPD +Y I + + EGME + REM SQ +V + TY +A
Sbjct: 1002 VSKHCFPDVVTYNTLIKGFCKYKRVEEGME-VFREM-SQRGLVGNTVTYNILIQGLFQAG 1059
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDY 310
D A ++ K+ + + YN L+ G + + +++ L+++ + I Y
Sbjct: 1060 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI-YTY 1118
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
M+E + K G+ E+ + L G D N +I G+C G + A+A+ +++ E
Sbjct: 1119 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 1178
Query: 371 KGKATTPNS 379
G T PNS
Sbjct: 1179 DG--TLPNS 1185
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 148/356 (41%), Gaps = 51/356 (14%)
Query: 26 RINKTTLYSIISPLGNPGT--------------RIEPE-------LDNWVKNGNKVRVGE 64
R N T S+IS L N G +I P+ +D +VK G V E
Sbjct: 902 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV---E 958
Query: 65 LQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL 124
+++ ++ KR + S +N G C+ D A Q+ F+ ++ F ++
Sbjct: 959 AEKLYDEMVKRSIDPSIVTYSSLIN--GFCMHDRLDEAKQM------FEFMVSKHCFPDV 1010
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
TY L+ + + ++ ++ + FR+M + G+ +T+TYN ++ + G +
Sbjct: 1011 -------VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 1063
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII---LREMESQPHIVLDWSTYA 241
++ EM + + P+ +Y ++ LE ++ L+ + +P I TY
Sbjct: 1064 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY----TYN 1119
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
KA ++ D+ + + D + YN +IS + G+K E L+ K
Sbjct: 1120 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 1179
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
+ Y T++ A ++ G+ E + +++KE G + D A IG N L
Sbjct: 1180 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD-----ASTIGLVTNML 1230
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 116/271 (42%), Gaps = 13/271 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ LL+ V+ ++ D +S +KM+ +GI T+N ++ + Q +L +M
Sbjct: 191 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 250
Query: 194 AKNIFPDNFSYRICINSYGAR---SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
PD + +N + R SD + + E+ +P IV Y + K
Sbjct: 251 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV----AYNAIIDSLCKT 306
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
++ A D K+ E + + + + Y L++ + S+ RL K+ I +
Sbjct: 307 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL---SDMIKKKITPNV 363
Query: 311 IT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
IT +L+A +K G+ EA+++ +E D +++I G C + + A + +
Sbjct: 364 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 423
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+V KG S+ + G+ A + E G +
Sbjct: 424 MVSKGCLADVVSYNTLINGFCKAKRVEDGMK 454
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 167/363 (46%), Gaps = 23/363 (6%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ + + D AL+ F++M+ GI + +TY+ ++ G++ +L++M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKA 250
+ I PD F++ I+++ L E + EM + P IV TY+S + +
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV----TYSSLINGFCMH 374
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+ +D+A + + + D + YN LI + E + ++ + +R + +
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF---REMSQRGLVGNT 431
Query: 311 IT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
+T +++ L + G+ + A+++ KE G + N ++ G C NG ++ A + E
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
L T ++ ++ G AGK E G+ L + KG KPD +++S
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD-----LFCNLSLKGVKPDVVAYNTMISGF 546
Query: 428 GDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
+GS ++ +A ++ +P N Y+ I+A +R+G + EL+ M++ G D
Sbjct: 547 CRKGSKEEADALFKEMKEDGTLP-NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Query: 484 EET 486
T
Sbjct: 606 AST 608
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 178/426 (41%), Gaps = 50/426 (11%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAV------------QLDLIGRV 111
E +++ + K +F + + + M GI P +H QL L V
Sbjct: 83 EFSKLLSAIAKMNKFDVVISLGEQMQNLGI----PHNHYTYSILINCFCRRSQLPLALAV 138
Query: 112 HGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
G + Y E T +LLN Y ++ +A++ +M G +T+T+N
Sbjct: 139 LGKMMKLGY-------EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191
Query: 172 I---MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
+ + L++K + + D M AK PD +Y + +N R D + +L +ME
Sbjct: 192 LIHGLFLHNKASEAMALID---RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 229 S---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
+P +++ Y + K +D A ++ K+ E + + + + Y+ LIS +
Sbjct: 249 QGKLEPGVLI----YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 286 GNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
G S+ RL +R IN D T +++A +K G+ EAEK+ E+ S D
Sbjct: 305 GRWSDASRLL---SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD--EMVKRSIDP 359
Query: 343 RIP--NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCM 400
I +++I G+C + + A+ + E +V K ++ + G+ + E G +
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 401 KAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKA 460
+ + G + ++ L + GD Q++ F + +P N Y+ +
Sbjct: 420 REMSQRGLVGNTVTYN--ILIQGLFQAGDCDMAQEI--FKEMVSDGVPPNIMTYNTLLDG 475
Query: 461 NIRNGK 466
+NGK
Sbjct: 476 LCKNGK 481
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 118/249 (47%), Gaps = 7/249 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ AL++ +V++ + +A + +M + I S +TY+ ++ + + ++ + M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 193 KAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
+K+ FPD +Y I + + EGME + REM SQ +V + TY +A
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGME-VFREM-SQRGLVGNTVTYNILIQGLFQAG 445
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDY 310
D A ++ K+ + + YN L+ G + + +++ L+++ + I Y
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI-YTY 504
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
M+E + K G+ E+ + L G D N +I G+C G + A+A+ +++ E
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 371 KGKATTPNS 379
G T PNS
Sbjct: 565 DG--TLPNS 571
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 148/356 (41%), Gaps = 51/356 (14%)
Query: 26 RINKTTLYSIISPLGNPGT--------------RIEPE-------LDNWVKNGNKVRVGE 64
R N T S+IS L N G +I P+ +D +VK G V E
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV---E 344
Query: 65 LQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL 124
+++ ++ KR + S +N G C+ D A Q+ F+ ++ F ++
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLIN--GFCMHDRLDEAKQM------FEFMVSKHCFPDV 396
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
TY L+ + + ++ ++ + FR+M + G+ +T+TYN ++ + G +
Sbjct: 397 -------VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 449
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII---LREMESQPHIVLDWSTYA 241
++ EM + + P+ +Y ++ LE ++ L+ + +P I TY
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY----TYN 505
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
KA ++ D+ + + D + YN +IS + G+K E L+ K
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
+ Y T++ A ++ G+ E + +++KE G + D A IG N L
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD-----ASTIGLVTNML 616
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 167/363 (46%), Gaps = 23/363 (6%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ + + D AL+ F++M+ GI + +TY+ ++ G++ +L++M
Sbjct: 54 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 113
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKA 250
+ I PD F++ I+++ L E + EM + P IV TY+S + +
Sbjct: 114 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV----TYSSLINGFCMH 169
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+ +D+A + + + D + YN LI + E + ++ + +R + +
Sbjct: 170 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF---REMSQRGLVGNT 226
Query: 311 IT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
+T +++ L + G+ + A+++ KE G + N ++ G C NG ++ A + E
Sbjct: 227 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 286
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
L T ++ ++ G AGK E G+ L + KG KPD +++S
Sbjct: 287 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD-----LFCNLSLKGVKPDVVAYNTMISGF 341
Query: 428 GDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
+GS ++ +A ++ +P N Y+ I+A +R+G + EL+ M++ G D
Sbjct: 342 CRKGSKEEADALFKEMKEDGTLP-NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 400
Query: 484 EET 486
T
Sbjct: 401 AST 403
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 114/248 (45%), Gaps = 5/248 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ AL++ +V++ + +A + +M + I S +TY+ ++ + + ++ + M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182
Query: 193 KAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
+K+ FPD +Y I + + EGME + REM SQ +V + TY +A
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGME-VFREM-SQRGLVGNTVTYNILIQGLFQAG 240
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
D A ++ K+ + + YN L+ G + + +++ + + Y
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
M+E + K G+ E+ + L G D N +I G+C G + A+A+ +++ E
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360
Query: 372 GKATTPNS 379
G T PNS
Sbjct: 361 G--TLPNS 366
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 148/356 (41%), Gaps = 51/356 (14%)
Query: 26 RINKTTLYSIISPLGNPGT--------------RIEPE-------LDNWVKNGNKVRVGE 64
R N T S+IS L N G +I P+ +D +VK G V E
Sbjct: 83 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV---E 139
Query: 65 LQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL 124
+++ ++ KR + S +N G C+ D A Q+ F+ ++ F ++
Sbjct: 140 AEKLYDEMVKRSIDPSIVTYSSLIN--GFCMHDRLDEAKQM------FEFMVSKHCFPDV 191
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
TY L+ + + ++ ++ + FR+M + G+ +T+TYN ++ + G +
Sbjct: 192 -------VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 244
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII---LREMESQPHIVLDWSTYA 241
++ EM + + P+ +Y ++ LE ++ L+ + +P I TY
Sbjct: 245 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY----TYN 300
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
KA ++ D+ + + D + YN +IS + G+K E L+ K
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
+ Y T++ A ++ G+ E + +++KE G + D A IG N L
Sbjct: 361 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD-----ASTIGLVTNML 411
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 125/287 (43%), Gaps = 21/287 (7%)
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAA 244
++ M AK PD +Y + +N R D + +L +ME +P +++ Y +
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI----YNTII 58
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K +D A ++ K+ E + + + + Y+ LIS + G S+ RL +R
Sbjct: 59 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL---SDMIER 115
Query: 305 YINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP--NAVIIGYCNNGLVQ 359
IN D T +++A +K G+ EAEK+ E+ S D I +++I G+C + +
Sbjct: 116 KINPDVFTFSALIDAFVKEGKLVEAEKLYD--EMVKRSIDPSIVTYSSLINGFCMHDRLD 173
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
A+ + E +V K ++ + G+ + E G + + + G + +
Sbjct: 174 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN--I 231
Query: 420 ITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK 466
+ L + GD Q++ F + +P N Y+ + +NGK
Sbjct: 232 LIQGLFQAGDCDMAQEI--FKEMVSDGVPPNIMTYNTLLDGLCKNGK 276
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 158/367 (43%), Gaps = 9/367 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ + D AL+ F KM+ G + +TYN ++ Y K + + +L M
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P+ SY + IN ++ + +L EM + + LD TY + Y K
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGY-SLDEVTYNTLIKGYCKEGN 325
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+A + + I Y LI GN + + D + R Y T
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ + G EA +VL+E +G S NA+I G+C G +++A A+LED+ EKG
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
+ S++ V +G+ + + + + + KG KPD +S++ ++
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE-----KGIKPDTITYSSLIQGFCEQRR 500
Query: 433 VQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEI 489
++ + + LR +P + Y A I A G + +L + M G+ D T +
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 490 LVCTMEK 496
L+ + K
Sbjct: 561 LINGLNK 567
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 183/448 (40%), Gaps = 62/448 (13%)
Query: 53 WVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVH 112
+++G V +I + K ++A+E D M +G+C
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC------------------ 377
Query: 113 GFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI 172
+E+TY T L++ + ++ ++A R+M + G + S +TYN +
Sbjct: 378 -------------PNERTYTT---LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 173 MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH 232
+ + TG+ E VL +MK K + PD SY ++ + D++ + REM +
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM-VEKG 480
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
I D TY+S + + +A D+ ++ D Y LI+ Y G+ + L
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 293 RLWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVL-----KEWELSGNSYDTRIP 345
+L + +EK + Y ++ L K EA+++L +E S +Y T I
Sbjct: 541 QLHNEMVEKGVLPDVVT--YSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 346 N----------AVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
N ++I G+C G++ A+ + E ++ K ++ ++ G+ AG +
Sbjct: 599 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 658
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA-FVAALRTVIPMNRQMY 454
+ K + G+ + +++ L EG V ++ + V LR+ +
Sbjct: 659 AYTLYKEMVK-----SGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQA 713
Query: 455 HAFIKANIRNGKG--VDELLDSMKADGI 480
++ N R G V ++L M DG
Sbjct: 714 KVLVEINHREGNMDVVLDVLAEMAKDGF 741
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 118/267 (44%), Gaps = 13/267 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ Y ++ +AL +M G+ S +TY ++ K G + + L +M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ + + P+ +Y ++ + + + +LREM P +V TY + + +
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV----TYNALINGHCV 427
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
++ A VL+ +E+ D + Y+ ++S + + E LR+ ++ ++ I D
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV---KREMVEKGIKPD 484
Query: 310 YIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
IT +++ + +EA + +E G D A+I YC G ++ A +
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKT 393
++VEKG +++V+ G +T
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQSRT 571
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 191/440 (43%), Gaps = 22/440 (5%)
Query: 58 NKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH--AVQLDLIGRVHGFL 115
NK+ + + + ++ +R + ++L + +M R+ C P +H + + L+GR
Sbjct: 102 NKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWC--KPNEHIYTIIISLLGREGLLE 159
Query: 116 SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
+ F + ++ +Y AL+N Y R Q + +L +MK+ + S LTYN ++
Sbjct: 160 KSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVI 219
Query: 174 CLYSKTG-QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH 232
++ G +E + + EM+ + I PD +Y +N+ R + E++ R M ++
Sbjct: 220 NSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTM-NEGG 278
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
+V D +TY + + K N ++K S++LK+ E D YN L+ YAS G+ +
Sbjct: 279 MVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAM 338
Query: 293 RLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
++ + A Y +L G +++ ++ E ++S D N +I +
Sbjct: 339 GVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVF 398
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
G + + D+VE+ PN + GK G + ++++ KG
Sbjct: 399 GEGGYFKEVVTLFHDMVEEN--VEPNM-GTYEGLIYACGKG--GLHEDAKKILLHMDEKG 453
Query: 413 WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR----QMYHAFIKANIRNG--K 466
P K T ++ G S + EA V T+ M + Y++ I R G K
Sbjct: 454 IVPSTKAYTGVIEAYGQAASYE--EALV-MFNTMNEMGSKPTVETYNSLINMFARGGLYK 510
Query: 467 GVDELLDSMKADGIDEDEET 486
+ ++ M G+ D ++
Sbjct: 511 ESEAIMWKMGESGVARDRDS 530
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 159/387 (41%), Gaps = 46/387 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LLN + D+A FR M E G+ TY +++ + K + EKV ++L EM
Sbjct: 250 TYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEM 309
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ PD SY + + +Y ++ D+ + R+M+ + V + TY+ + Y
Sbjct: 310 ESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQ-EARCVPNAVTYSMLLNLYGGHGR 368
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD---------------- 296
D ++ + + + D YN LI ++ G EV+ L+
Sbjct: 369 YDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEG 428
Query: 297 ---------LEKTACKRYINRD----------YITMLEALMKLGEHEEAEKVLKEWELSG 337
L + A K ++ D Y ++EA + +EEA + G
Sbjct: 429 LIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMG 488
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+ N++I + GL + +EAI+ + E G A +S+ V GY G+ E
Sbjct: 489 SKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAI 548
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT--VIPMNRQMYH 455
+ V +E ++PD + ++LS G V + E +R ++P + Y
Sbjct: 549 KTY-----VELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILP-SVMCYC 602
Query: 456 AFIKANIRNGKGVD--ELLDSMKADGI 480
I R+ + D E+LD M + +
Sbjct: 603 MMIAVYARSNRWDDAYEVLDEMVTNKV 629
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 7/249 (2%)
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD--DEKTYQTYGALLNCYVRQR 145
M+ KGI V ++ G+ + A F+ + + + T +TY +L+N + R
Sbjct: 449 MDEKGIVPSTKAYTGV-IEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGG 507
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
++ + KM E G+A ++N ++ Y + GQ+E+ E++ PD ++
Sbjct: 508 LYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFE 567
Query: 206 ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK-AE 264
++ Y ++ E RE+ + I+ Y Y ++N D A +VL +
Sbjct: 568 AVLSVYCTAGLVDESEEQFREIRAS-GILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVT 626
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKLGEH 323
++ + + Y N V ++D L C + R Y T+LEAL LG+
Sbjct: 627 NKVSNIHQVVGKMMKGDYDDYSNWQMVEYVFDKLNSEGCGLGM-RFYNTLLEALWWLGQK 685
Query: 324 EEAEKVLKE 332
E A +VL E
Sbjct: 686 ERAARVLSE 694
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 115/282 (40%), Gaps = 11/282 (3%)
Query: 94 CVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK--DDEKTYQTYGALLNCYVRQRQTDKAL 151
CV +++ L+L G + F +K + E TY L+ + + +
Sbjct: 349 CVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVV 408
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
+ F M E + + TY ++ K G +E +L M K I P +Y I +Y
Sbjct: 409 TLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAY 468
Query: 212 GARSDLEGMEII---LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
G + E ++ + EM S+P + TY S + + + L ++ ++ K E
Sbjct: 469 GQAASYEEALVMFNTMNEMGSKPTV----ETYNSLINMFARGGLYKESEAIMWKMGESGV 524
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAE 327
+D +N +I Y G E ++ + +LEK + R + +L G +E+E
Sbjct: 525 ARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQP-DERTFEAVLSVYCTAGLVDESE 583
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ +E SG +I Y + +A +L+++V
Sbjct: 584 EQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMV 625
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 157/367 (42%), Gaps = 9/367 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ + D AL F +M++ G + +TYN ++ Y K + + ++L M
Sbjct: 207 TYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSM 266
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P+ SY + IN ++ + +L EM + + LD TY + Y K
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGY-SLDEVTYNTLIKGYCKEGN 325
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+A + + I Y LI GN + D + R Y T
Sbjct: 326 FHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTT 385
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ + G EA +VLKE +G S NA+I G+C G + +A A+LED+ EKG
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG 445
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
S++ V +G+ + + + + ++ KG KPD +S++ ++
Sbjct: 446 LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVA-----KGIKPDTITYSSLIQGFCEQRR 500
Query: 433 VQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEI 489
++ + F LR +P + Y A I A G + +L + M G+ D T +
Sbjct: 501 TKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSV 560
Query: 490 LVCTMEK 496
L+ + K
Sbjct: 561 LINGLNK 567
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 186/438 (42%), Gaps = 37/438 (8%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKG----ICVFAPCDHAV-QLDLIGRVHGFLSAESYFS 122
+I+ K F QAL + M R G + + H++ + + R FL +
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLD-QMRVR 374
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
L +E+TY T L++ + ++ ++A ++M + G + S +TYN ++ + G+
Sbjct: 375 GLCPNERTYTT---LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKM 431
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
VL +MK K + PD SY ++ + D++ + R+M ++ I D TY+S
Sbjct: 432 VDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKG-IKPDTITYSS 490
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKT 300
+ + +A D+ + D Y LI+ Y G+ + ++L + +EK
Sbjct: 491 LIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKG 550
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVL-----KEWELSGNSYDTRIPN--------- 346
+ Y ++ L K EA+++L +E S +Y T I N
Sbjct: 551 VLPDVVT--YSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608
Query: 347 -AVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
++I G+C G++ A+ + E ++EK ++ V+ G+ G + + K +
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVK 668
Query: 406 VYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA-ALRTVIPMNRQMYHAFIKANIRN 464
G+ + +++ L EG V ++ + +A LR+ + ++ N R
Sbjct: 669 -----SGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHRE 723
Query: 465 GKG--VDELLDSMKADGI 480
G V ++L M DG
Sbjct: 724 GNMDVVLDVLAEMAKDGF 741
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/321 (18%), Positives = 132/321 (41%), Gaps = 8/321 (2%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
LK E +Y ++N R+ + + +M + G +L +TYN ++ Y K G +
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+ + EM + P +Y I+S ++ L +M + + + TY +
Sbjct: 328 QALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG-LCPNERTYTTL 386
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTAC 302
+ + +++A VLK+ + + YN LI+ + G + + L D+++
Sbjct: 387 VDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGL 446
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+ Y T+L + + +EA +V ++ G DT +++I G+C + A
Sbjct: 447 TPDV-VSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
+ ++++ G ++ + Y G ++ Q + KG PD +
Sbjct: 506 DLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVE-----KGVLPDVVTYSV 560
Query: 423 ILSKLGDEGSVQDVEAFVAAL 443
+++ L + ++ + + L
Sbjct: 561 LINGLNKQARTREAKRLLLKL 581
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 181/446 (40%), Gaps = 36/446 (8%)
Query: 61 RVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY 120
RV ++R+ +L+ R + MN C CD + R + + Y
Sbjct: 297 RVEFVRRVFEELKDRGPSPNIYTYTIMMNF--YCSDVGCDAGM------RQAAVILGKIY 348
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
S K TY TY ++ + + AL R + L++ ++ND++ + K G
Sbjct: 349 RSGEKPTVVTYSTY---IHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRG 405
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDW 237
+ + VL EMK+ I PD +SY I IN++ + D+ ++ EME +P IV
Sbjct: 406 EVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIV--- 462
Query: 238 STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
+Y S H K N++ A D+ + D Y LI + G+ ++L L
Sbjct: 463 -SYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKL--L 519
Query: 298 EKTACKRYINRDYI--TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
E+ C + + +++ KLG ++A +V G DT N ++ G C
Sbjct: 520 EEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRA 579
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL----------- 404
G + A +LED E G P+S+ + G ER + + L
Sbjct: 580 GYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNY 639
Query: 405 SVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAF--IKANI 462
S + G + + K ++ +++ G ++ + L ++ + +M+ A+ K
Sbjct: 640 STLISGFAKQSNFKRAVNLFTRMVKVGITFNIATY-TILMSIFSHSHKMHEAYGIFKEMK 698
Query: 463 RNGKGVDELLDSMKADGIDEDEETKE 488
G +D++ + G + E K+
Sbjct: 699 ERGLCLDQISYTTLIVGFCNNREMKK 724
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L++ + +Q +A++ F +M ++GI + TY +M ++S + + + + EMK
Sbjct: 639 YSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMK 698
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKA 250
+ + D SY I + +++ + EM + P+++ TY + K+
Sbjct: 699 ERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVI----TYTCIIDGFCKS 754
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
N ID A+ V K D + Y LI Y G + +L+D+ K
Sbjct: 755 NRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMK 803
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 112/273 (41%), Gaps = 4/273 (1%)
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
S+ K D Y+T L++ + Q D A+ +M + + + ++ Y K G
Sbjct: 490 SSCKYDSTVYET---LIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGL 546
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
+++ +V M I+PD + ++ R+ + L E + L+ +Y
Sbjct: 547 FDQALEVFNAMLRDGIWPDTIACNYILDG-SCRAGYFKEALTLLEDFQEHGFNLNPHSYN 605
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
+ + K ++A ++L + +R + Y+ LIS +A N + L+
Sbjct: 606 AIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKV 665
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
+ Y ++ + EA + KE + G D +I+G+CNN ++ A
Sbjct: 666 GITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKA 725
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
A+ E++ +G + ++ + G+ + + +
Sbjct: 726 WALFEEMSREGCSPNVITYTCIIDGFCKSNRID 758
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/400 (19%), Positives = 152/400 (38%), Gaps = 63/400 (15%)
Query: 65 LQRIIRDLR----KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLD--------LIGRVH 112
+ R+ + L ++K+F +E + I F HA L L+ +
Sbjct: 162 VSRVFKSLSWSVARKKKFGNWVECHGF--SHSISCFRIIVHAFALAGMRLEVWALLRDIV 219
Query: 113 GFLSAESY-----FSNLKDD----EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
GF + Y FS D E++ + L++ + + AL F K +G+
Sbjct: 220 GFCNEAKYDTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLE 279
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY----GARSDLEG 219
T N ++ + + E V V E+K + P+ ++Y I +N Y G + +
Sbjct: 280 PDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQ 339
Query: 220 MEIILREM--ESQPHIVLDWSTYASA----------------AHF--------------- 246
+IL ++ + V+ +STY H+
Sbjct: 340 AAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIY 399
Query: 247 -YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKR 304
+ K + +A VL++ + D Y+ LI+ + G+ + L L ++E + K
Sbjct: 400 GFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKP 459
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
I Y +++ L K + A + S YD+ + +I G+C G + +A +
Sbjct: 460 SI-VSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKL 518
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
LE+++ T S + GY+ G ++ + A L
Sbjct: 519 LEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAML 558
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 99/241 (41%), Gaps = 11/241 (4%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
+L+ R +AL+ +E G L+ +YN I+ K G E+ ++L M +N
Sbjct: 572 ILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRN 631
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ P +Y I+ + +S+ + + M + I + +TY + ++ + +A
Sbjct: 632 VLPSVVNYSTLISGFAKQSNFKRAVNLFTRM-VKVGITFNIATYTILMSIFSHSHKMHEA 690
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
+ K+ +ER D I Y LI N E+ + W L + + + + IT
Sbjct: 691 YGIFKEMKERGLCLDQISYTTLI---VGFCNNREMKKAWALFEEMSREGCSPNVITYTCI 747
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV-----IIGYCNNGLVQNAEAILEDLVEK 371
+ + + L W + D+ IP+ V I Y +G A + + + +K
Sbjct: 748 IDGFCKSNRID--LATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDK 805
Query: 372 G 372
G
Sbjct: 806 G 806
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 102/231 (44%), Gaps = 4/231 (1%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L+++ ++G + II L K +ALE+ M ++ + + + +++ +
Sbjct: 589 LEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNV-LPSVVNYSTLISGFA 647
Query: 110 RVHGFLSAESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
+ F A + F+ + T+ TY L++ + + +A F++MKE G+ L +
Sbjct: 648 KQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQI 707
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
+Y ++ + + +K + EM + P+ +Y I+ + + ++ + +M
Sbjct: 708 SYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKM 767
Query: 228 ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
++ ++ D TY +Y K D+A + +++ D I +N L
Sbjct: 768 -NRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 197/449 (43%), Gaps = 39/449 (8%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSN 123
+L +++ L + +A+ + +W+ DH V ++++ R+ G S S +
Sbjct: 145 DLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHHV-IEILVRILGRESQYSVAAK 203
Query: 124 LKD---------DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
L D D + Y T +L+ Y R + +KA++ F +MKEMG + + +TYN I+
Sbjct: 204 LLDKIPLQDYMLDVRAYTT---ILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILD 260
Query: 175 LYSKTGQ-YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---Q 230
++ K G+ + K+ VL EM++K + D F+ +++ L + E++S +
Sbjct: 261 VFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYE 320
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
P V TY + + KA + +A VLK+ EE D + YN L++ YA G E
Sbjct: 321 PGTV----TYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKE 376
Query: 291 VLRLWDL--EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
+ ++ +K I Y T+++A K G+ +EA K+ + +G +T NAV
Sbjct: 377 AAVVIEMMTQKGVMPNAIT--YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 434
Query: 349 IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK---TERGFQCMKAALS 405
+ +L D+ G +W + A + G R F+ MK+
Sbjct: 435 LSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSC-- 492
Query: 406 VYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRN 464
G++PD +++S G GS D + R Y+A + A R
Sbjct: 493 ------GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 546
Query: 465 G--KGVDELLDSMKADGIDEDEETKEILV 491
G + + ++ MK+ G E + +++
Sbjct: 547 GDWRSGENVISDMKSKGFKPTETSYSLML 575
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 146/367 (39%), Gaps = 69/367 (18%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
LK DE T T +L+ R+ +A F ++K G T+TYN ++ ++ K G Y
Sbjct: 284 LKFDEFTCST---VLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYT 340
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+ VL EM+ N D+ +Y + +Y AR+ ++ EM +Q ++ + TY +
Sbjct: 341 EALSVLKEMEENNCPADSVTYNELVAAY-ARAGFSKEAAVVIEMMTQKGVMPNAITYTTV 399
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTAC 302
Y KA D+A + +E + YN ++S+ +E+++ L D++ C
Sbjct: 400 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGC 459
Query: 303 -------------------KRYINR---------------DYITMLEALMKLGEHEEAEK 328
+++NR + T++ A + G +A K
Sbjct: 460 FPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 519
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ E +G + NA++ G ++ E ++ D+ KG T S++++ Y
Sbjct: 520 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA 579
Query: 389 DAG------KTERG--------------------FQCMKAALS----VYVEGKGWKPDPK 418
G + E G F+C A S + G+KPD
Sbjct: 580 KGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMV 639
Query: 419 VITSILS 425
+ S+LS
Sbjct: 640 IFNSMLS 646
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/400 (19%), Positives = 162/400 (40%), Gaps = 37/400 (9%)
Query: 57 GNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLS 116
G K R E+ +++ D++ F + W + A C + + RV +
Sbjct: 439 GKKSRSNEMIKMLCDMKSNGCFPNR---ATWNT-----ILALCGNKGMDKFVNRVFREMK 490
Query: 117 AESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLY 176
+ + E T+ L++ Y R A + +M G TYN ++
Sbjct: 491 SCGF-------EPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 543
Query: 177 SKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLD 236
++ G + +V+++MK+K P SY + + Y + G+E I E ++ I
Sbjct: 544 ARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI-EEGINEGQIFPS 602
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA--SLGNKSEVLRL 294
W + K + + ++ + D + +N ++S++ ++ +++E + L
Sbjct: 603 WMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGI-L 661
Query: 295 WDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
+ + +N D +T +++ ++ GE +AE++LK E S D N VI G
Sbjct: 662 QSIHEDG----LNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKG 717
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA---GKTERGFQCMKAALSVYV 408
+C GL+Q A +L ++ E+G ++ +GY G+ E +CM
Sbjct: 718 FCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAK------ 771
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
+P+ ++ G + FV+ ++T P
Sbjct: 772 --NDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDP 809
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 163/375 (43%), Gaps = 17/375 (4%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ D +Y ++N Y + K L ++M+ G+ + TYN I+ L K+G+ +
Sbjct: 3 FRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVD 62
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
VL EM + I PD Y I+ + +++ + EME Q IV D+ Y +
Sbjct: 63 DAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQ-RIVPDFIAYTAV 121
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
+ + +A V K R + D + Y LI Y G E+ + + L +
Sbjct: 122 ICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSG---EMEKAFSLHNQMVQ 178
Query: 304 RYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
+ + +T + + L KLG+ + A ++L E G + N+++ G C +G ++
Sbjct: 179 SGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQ 238
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
A ++E++ G ++ + Y G+ + + ++ L +G +P
Sbjct: 239 AVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLD-----RGLQPTVITF 293
Query: 421 TSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKA-NIRNG-KGVDELLDSMK 476
+++ G ++D E +A + + ++P N Y++ +K IRN + E+ M
Sbjct: 294 NVLMNGFCMSGMLEDGERLLAWMLEKGIMP-NTTTYNSLMKQYCIRNNMRCTTEIYKGMC 352
Query: 477 ADGIDEDEETKEILV 491
A G+ D T IL+
Sbjct: 353 ARGVMPDSNTYNILI 367
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 119/278 (42%), Gaps = 13/278 (4%)
Query: 110 RVHGFLSAESYFSNL-----KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIAL 164
R + A+ F+ + + DE TY T L++ Y + + +KA S +M + G+
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTT---LIDGYCKSGEMEKAFSLHNQMVQSGLTP 183
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIIL 224
+ +TY + K GQ + ++L EM K + + +Y +N ++ ++
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243
Query: 225 REMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
EME + D T+ + Y K + KA ++L++ +R Q I +N L++ +
Sbjct: 244 EEMEV-AGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCM 302
Query: 285 LG--NKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
G E L W LEK Y ++++ ++ K G D+
Sbjct: 303 SGMLEDGERLLAWMLEKGIMPN--TTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
N +I G+C ++ A + +++ EKG T +S+
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSY 398
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 111/298 (37%), Gaps = 7/298 (2%)
Query: 13 IHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDL 72
+HN + N + T L + LG T E L G ++ + ++ L
Sbjct: 172 LHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANEL-LHEMCGKGLQLNICTYNSLVNGL 230
Query: 73 RKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKT 130
K QA+++ + M G+ +D + + A + D + T
Sbjct: 231 CKSGNIRQAVKLMEEMEVAGM-YPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPT 289
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
T+ L+N + + M E GI +T TYN +M Y ++
Sbjct: 290 VITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYK 349
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
M A+ + PD+ +Y I I + +++ + +EM ++ L S+Y S + K
Sbjct: 350 GMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM-AEKGFNLTASSYNSIIKGFFKK 408
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
I +A ++ ++ D YN + + GN L L D C ++NR
Sbjct: 409 KKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIENC--FLNR 464
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 188/499 (37%), Gaps = 82/499 (16%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++R L R R + AL V D M R+G P H + L+ R GF SA +L
Sbjct: 165 VVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVI-LEAACRGGGFRSAVRVLEDLHAR 223
Query: 128 EKTYQTYGA--LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---CL------- 175
+LN Q D+AL R + G ++YN ++ C+
Sbjct: 224 GCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 283
Query: 176 -------------------------YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+ G +E+V +VL +M PD Y I+
Sbjct: 284 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDG 343
Query: 211 YGARSDLEGMEIILREMES---QPHIV-------------------------------LD 236
LE IL M S +P++V LD
Sbjct: 344 ICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLD 403
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
T+ F+ + L+D+ ++L++ E D I Y +I+ + G E + L
Sbjct: 404 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 463
Query: 297 LEKTACKRYINR-DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
TAC N Y +L+ L +AE ++ + G + N +I C
Sbjct: 464 -SMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 522
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
GLV+ A +L+ ++ G + S++ V G AGKT+ + L+V V KG P
Sbjct: 523 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALE----LLNVMVN-KGMSP 577
Query: 416 DPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKG--VDELL 472
+ + +SI S L EG + V + F T I + +Y+A I + + G+ E L
Sbjct: 578 NTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFL 637
Query: 473 DSMKADGIDEDEETKEILV 491
M + G +E T IL+
Sbjct: 638 AYMVSSGCVPNESTYTILI 656
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 79/214 (36%), Gaps = 15/214 (7%)
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
YN +++ Y G RL Y Y ++ AL G +A VL E
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVPPNAY---TYFPVVRALCARGRIADALAVLDEMP 186
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G + + + ++ C G ++A +LEDL +G A + +V D G +
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE---GSVQDVEAFVAALRTVIPMNR 451
++ S G +PD ++L L G VQ E +R P N
Sbjct: 247 EALHLLRDLPSF-----GCEPDVVSYNAVLKGLCMAKRWGCVQ--ELMEEMVRMACPPNI 299
Query: 452 QMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
++ I RNG + V E+L M G D
Sbjct: 300 VTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPD 333
>gi|302798915|ref|XP_002981217.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
gi|300151271|gb|EFJ17918.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
Length = 541
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 198/450 (44%), Gaps = 53/450 (11%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L +W GN V + ++I L R + Q +++ +W+ + DH V++D
Sbjct: 129 LKDWQSEGNLVTRDVIYKLIIRLHARMFYFQGMKLMNWVIVEKPFQLTDFDHLVRMDFHT 188
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
R + F+ ++D KT Y LL + + ++AL ++MKE+ + ++ +Y
Sbjct: 189 RELKVDKVLTCFNRIQD--KTETCYVLLLQAFATAHRKERALDVLKQMKELVLITNSYSY 246
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAK-NIFPDNFSYRICINSYGARSDLEGMEIILREME 228
N ++ +Y + G ++ ++ E+K K N+ PD F+Y +N +R L GM+ + +E
Sbjct: 247 NLVIAMYLRMGLIDEAKEMFAELKDKSNVAPDAFTY---LNLLKSRDAL-GMDDLEDTIE 302
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
F++ + I G + LI LY ++G K
Sbjct: 303 E----------------FFLDVDKIP----------------TGFEWRNLIRLYGAMGKK 330
Query: 289 SEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
+V RLW +K + ++ +E+ GE ++ E++ K+ E R +
Sbjct: 331 KDVERLWREQKRVAEYMPESYFLAAIESFGMNGEMKQFEEICKQLEAQNQKLSERQCFTM 390
Query: 349 IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK----TERGFQCMKAAL 404
+ YC NGL+ +AE + + E + + +GY + + TE+ + + L
Sbjct: 391 LKVYCMNGLMNDAERTAKKMEELRYKLGFKGYHYLVSGYVNRHQFVKATEKFSEAEEKGL 450
Query: 405 SVYVEGKGWKPDPKVIT--SILSKLGDEGSVQDVEAFV-AALRTV-IPMNRQMYHAFIKA 460
+ KG+K +P +T ++L + ++ E V L+T P + ++++A +K
Sbjct: 451 A-----KGFK-NPLFVTVLTLLEAYAGKKELEKAEEMVEKVLKTKHYPYDIRLFNALLKV 504
Query: 461 NIRNGKGVDELLDSMKADGIDEDEETKEIL 490
R K + + +K ++ +E T ++L
Sbjct: 505 YRRCQKPAWGIENRIKEAKLEPNETTHKLL 534
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 158/368 (42%), Gaps = 14/368 (3%)
Query: 28 NKTTLYSIISPLGNPGTRIEP-ELDNWVK-NGNKVRVGELQRIIRDLRKRKRFSQALEVS 85
N T +I++ GN G E L +W+K NG V I+ L K+ RF+ LE+
Sbjct: 362 NAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEML 421
Query: 86 DWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT------YQTYGALLN 139
M+R G C + V + + V G E Y + + + K+ T+ L++
Sbjct: 422 GEMSRSG-CT----PNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLIS 476
Query: 140 CYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP 199
Y R A + +M G TYN ++ + S+ G + ++ +MK + P
Sbjct: 477 AYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKP 536
Query: 200 DNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
++ SY + + + + G+E I +E+ + + W + K ++
Sbjct: 537 NDMSYSLLLQCHAKGGNAAGIEAIEKEV-YEGTVFPSWVILRTLVISNFKCRRLEGIERA 595
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
++ R + D + +N ++S+YA G + ++D K Y +M++ K
Sbjct: 596 FQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAK 655
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
E EAEK+LK + S D N V+ G+C GL++ A+ IL +++ G +
Sbjct: 656 SNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVT 715
Query: 380 WAVVAAGY 387
+ + GY
Sbjct: 716 YHTLVGGY 723
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 151/373 (40%), Gaps = 53/373 (14%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ-YEKVPDVLT 190
+ Y +L+ + + ++AL F ++K G+A + + YN ++ +Y + G+ + ++ +L
Sbjct: 188 RAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAMLE 247
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
EM+A + PD F+ I + G +
Sbjct: 248 EMRAAGVEPDGFTASTVIAACG------------------------------------RD 271
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTACKRYINRD 309
L+D+A + + R + YN L+ ++ GN E LR L ++E++ CK D
Sbjct: 272 GLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCK----PD 327
Query: 310 YITMLE---ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+T E + + G +EEA K L G + N ++ Y N G V A A+ +
Sbjct: 328 AVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFD 387
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ + G N++ ++ GK R F M L + G P+ ++L+
Sbjct: 388 WMKKNGFIPYVNTYNLILGML---GKKSR-FNVMLEMLG-EMSRSGCTPNRVTWNTMLAV 442
Query: 427 LGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDED 483
G G V + +++ + + R ++ I A R G + ++ D M A G
Sbjct: 443 CGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPC 502
Query: 484 EETKEILVCTMEK 496
T L+ + +
Sbjct: 503 LTTYNALLSVLSR 515
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/444 (20%), Positives = 164/444 (36%), Gaps = 94/444 (21%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCD--HAVQLDLIGRV-------------- 111
++ L R+ +ALE+ + R+G+ AP + V LD+ GR+
Sbjct: 193 VLHALSHEGRYERALELFAELKREGV---APTHVMYNVMLDVYGRMGRSWPQIVAMLEEM 249
Query: 112 -------HGFLS---------------AESYFSNLKDDEKT--YQTYGALLNCYVRQRQT 147
GF + A ++F +LK TY ALL + +
Sbjct: 250 RAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNY 309
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
+AL ++M+E G +TYN++ Y++ G YE+ L M +K I P+ F+Y
Sbjct: 310 MEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTI 369
Query: 208 INSYGARSDLEGMEIILREMESQPHIV------LDWSTYASAAHFYIKANLIDKAS---- 257
+ +YG ++ + M+ I L + F + ++ + S
Sbjct: 370 MTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGC 429
Query: 258 --------DVLKKAEER---------LEQKDGIG-------YNFLISLYASLGNKSEVLR 293
+L +R LE+ G +N LIS Y G+++ +
Sbjct: 430 TPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFK 489
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
++D A Y +L L + G+ A+ ++ + + G + + ++ +
Sbjct: 490 MYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHA 549
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT------ERGFQCMKAALSVY 407
G EAI +++ E T SW ++ K ER FQ
Sbjct: 550 KGGNAAGIEAIEKEVYE---GTVFPSWVILRTLVISNFKCRRLEGIERAFQ--------E 598
Query: 408 VEGKGWKPDPKVITSILSKLGDEG 431
V +G KPD + S+LS G
Sbjct: 599 VMARGHKPDLVIFNSMLSMYAKNG 622
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ ++L+ Y + KA F +K+ G++ +TYN +M +Y+K+ + + +L +K
Sbjct: 611 FNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLK 670
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKA 250
+ PD SY +N + + ++ + IL EM + +P +V TY + Y
Sbjct: 671 TSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVV----TYHTLVGGYASR 726
Query: 251 NLIDKASDVLKKAEER 266
+ +A +V+ +R
Sbjct: 727 EMFSEAREVVSYMIQR 742
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++++ Y + ++ +A +++K + ++YN +M + K G ++ +L+EM
Sbjct: 645 TYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEM 704
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
A + P +Y + Y +R ++ M + ++ TY Y KA
Sbjct: 705 IADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSPMEL-TYRRVVDSYCKAKR 763
Query: 253 IDKASDVLKKAEE 265
D+A L + E
Sbjct: 764 FDEARGFLYEIAE 776
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 156/350 (44%), Gaps = 17/350 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y ALL Y +AL F+ +K+ G+ ++Y ++ Y ++ Q EK +V EM
Sbjct: 367 SYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEM 426
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ P+ SY I++YG+ L+ +L EME QP V+ ST +A +
Sbjct: 427 RKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPD-VISISTLLTACG---R 482
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ K +L A+ R Q + + YN I Y SLG+ + L L+ + +
Sbjct: 483 CKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVT 542
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR-IPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ KLG + E+ K ++ L N + T+ + ++VI Y G + A + +
Sbjct: 543 YNILISGSCKLGRYVESLKFFED-MLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSM 601
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
E G ++ + Y D G R + K +E G +PD V +S++ L
Sbjct: 602 KETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKE-----MENNGTQPDAIVCSSLMEALN 656
Query: 429 DEGSVQDVEAFVAALRT-VIPMNRQMYHAFIKAN--IRNGKGVDELLDSM 475
G + V + ++ I +N++ Y I + +R+ K ++++ +
Sbjct: 657 KGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSCTMLRDWKTASQIIEHL 706
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 181/438 (41%), Gaps = 27/438 (6%)
Query: 68 IIRDLRKRKRFSQALEVSDWM-NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD 126
+IR++ A+ V WM N++ C + + + L R + A F +++
Sbjct: 123 LIREIAISGSLKHAVHVFRWMKNQENYCARNDI-YGMMIRLHARHNKVDQARGLFFEMQE 181
Query: 127 --DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
+ TY +L++ + R Q A++ M+ I S TYN+++ G ++K
Sbjct: 182 WRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKK 241
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSY--GARSDLEGMEIILREMESQPHIVLDWSTYAS 242
++ +M + PD ++ I ++++ GA+ I E+ + D T
Sbjct: 242 ALELCKKMTENGVGPDLITHNIVLSAFKNGAQYS---KAIAYFEIMKSSKVAPDTCTMNI 298
Query: 243 AAHFYIKANLIDKASDVLKKAEERLE--QKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
H +K L +A ++ ER D + Y ++ Y+ G ++D+
Sbjct: 299 VIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVA 358
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
R Y +L A G H EA + K + +G D +++ Y + +
Sbjct: 359 EGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEK 418
Query: 361 AEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPD 416
A + ++ + A PN S+ + Y AG +K A+S+ +E G +PD
Sbjct: 419 AREVFNEM--RKNACKPNKVSYNALIDAYGSAGM-------LKEAISLLHEMEQDGIQPD 469
Query: 417 PKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG--KGVDELLD 473
I+++L+ G + ++ +AA ++ I +N Y++ I + + G K L
Sbjct: 470 VISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYT 529
Query: 474 SMKADGIDEDEETKEILV 491
SM+A + D T IL+
Sbjct: 530 SMRAGNVKPDAVTYNILI 547
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 88/210 (41%), Gaps = 5/210 (2%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T + Y +++ YV+Q + +A S F MKE G LTY ++ YS G + + D+
Sbjct: 574 TKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLF 633
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME--SQPHIVLDWSTYASAAHFY 247
EM+ PD +C + A + E +L+ +E Q I L+ Y
Sbjct: 634 KEMENNGTQPDAI---VCSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSC 690
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
AS +++ + L N +++ G +++L+ T+C
Sbjct: 691 TMLRDWKTASQIIEHLDSSLSSISFGTLNHILNFLGKCGRTESMMKLFYKMVTSCSTVGL 750
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSG 337
Y +L L+ +G+ + +VL+ E +G
Sbjct: 751 STYTILLRNLLIVGKWRKYVEVLQWMEDAG 780
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 118/247 (47%), Gaps = 7/247 (2%)
Query: 154 FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG- 212
F ++K G+AL+ +YN ++C ++K G +KV +V+ EM + + PD FS+ I +Y
Sbjct: 86 FLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAM 145
Query: 213 ARSDLEGMEII--LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
+R G+++ ++ P IV TY + + ++ + +A ++ ++ Q
Sbjct: 146 SRKPERGLQVFSNMKAAGVLPDIV----TYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQP 201
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
D Y+ L+S+Y G ++ L ++ + R Y +++ A + G EE+ K
Sbjct: 202 DFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHF 261
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+ E G D + N +I Y G+V +A +L L +G S+A++ G+ A
Sbjct: 262 SQMEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFLHA 321
Query: 391 GKTERGF 397
G +
Sbjct: 322 GHVDEAL 328
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 88/198 (44%), Gaps = 9/198 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
++ AL+ Y R+ ++ L F MK G+ +TY ++ ++S++ +++ ++ EM
Sbjct: 135 SFNALIAAYAMSRKPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSAMHKEAIEMFEEM 194
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIK 249
PD F Y + ++ YG + +I ++ +P+IV TY S ++
Sbjct: 195 VVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIV----TYTSLISAHLH 250
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR- 308
L++++ + E + D N +I YA G ++ L TA NR
Sbjct: 251 KGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLH-RLTAQGVCPNRA 309
Query: 309 DYITMLEALMKLGEHEEA 326
Y ++E + G +EA
Sbjct: 310 SYAIIVEGFLHAGHVDEA 327
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 174/374 (46%), Gaps = 21/374 (5%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+T+ A+L+ +++ QT+ + +M + I + T+N ++ + K G+ +K D +
Sbjct: 202 ETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGS 261
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ + P+ +Y I+ Y +R +EG ++L M+++ + D TY S K
Sbjct: 262 MENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNR-GVEPDSYTYGSLISGMCKGG 320
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI---NR 308
+++AS +L+K +E + YN LI Y NK ++++ + +R I
Sbjct: 321 KLEEASGILEKMKEIGLLPTAVTYNTLIDGYC---NKGDLVKAFGYRDEMVRRAILPTVS 377
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ AL G+ +EA+ ++K+ SG D+ N +I GYC G + A + +++
Sbjct: 378 TYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM 437
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSILSK 426
+ KG T ++ + + K R MKAA ++ + +G PD + +++
Sbjct: 438 ISKGIQPTLVTYTSL---IYVLSKRNR----MKAADDLFEKIIREGASPDLIMFNALIDG 490
Query: 427 LGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDE 482
G++ A + + R ++P + Y+ ++ R GK ELL MK GI
Sbjct: 491 HCANGNLDRAFALLKEMDKRNIVP-DEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRP 549
Query: 483 DEETKEILVCTMEK 496
D + L+ K
Sbjct: 550 DHISYNTLISGYSK 563
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 121/290 (41%), Gaps = 50/290 (17%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY L++ Y + KA + +M I + TYN ++ G+ ++ ++
Sbjct: 340 TAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMI 399
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHF 246
+M I PD+ +Y I IN Y + + + EM S QP +V TY S +
Sbjct: 400 KDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLV----TYTSLIYV 455
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
K N + A D+ +K D I +N LI + + GN R + L K KR I
Sbjct: 456 LSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLD---RAFALLKEMDKRNI 512
Query: 307 NRD---YITMLEALMKLGEHEEAEKVLKEWELSGN-----SYDTRIP------------- 345
D Y T+++ + G+ EEA ++LKE + G SY+T I
Sbjct: 513 VPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFT 572
Query: 346 -----------------NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
NA+I G C N AE +L+++V KG TP+
Sbjct: 573 IRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKG--ITPD 620
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 106/507 (20%), Positives = 182/507 (35%), Gaps = 124/507 (24%)
Query: 61 RVGELQRIIRDLRKR-----KRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHG-- 113
R+G I+ D+ R KR A E D M KG+ +A+ L L +++
Sbjct: 160 RLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAM-LSLFLKLNQTE 218
Query: 114 ---FLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYN 170
L AE + +K T T+ ++N ++ + KA M+ +G+ + +TYN
Sbjct: 219 TVWVLYAEMFRLKIK---STVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYN 275
Query: 171 DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES- 229
++ Y G+ E VL MK + + PD+++Y I+ LE IL +M+
Sbjct: 276 TVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEI 335
Query: 230 ---------------------------------QPHIVLDWSTYASAAHFYIKANLIDKA 256
+ I+ STY H +D+A
Sbjct: 336 GLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEA 395
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
++K + D I YN LI+ Y GN + L D + + Y +++
Sbjct: 396 DGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYV 455
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG-------------------- 356
L K + A+ + ++ G S D + NA+I G+C NG
Sbjct: 456 LSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPD 515
Query: 357 ---------------LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
V+ A +L+++ +G S+ + +GY G F
Sbjct: 516 EVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRD 575
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKAN 461
LS+ G+ P ++L+ Y+A I+
Sbjct: 576 EMLSI-----GFNP------TLLT----------------------------YNALIQGL 596
Query: 462 IRNGKG--VDELLDSMKADGIDEDEET 486
+N +G +ELL M + GI D+ T
Sbjct: 597 CKNQQGDLAEELLKEMVSKGITPDDST 623
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 7/160 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ AL++ + D+A + ++M + I +TYN +M + G+ E+ ++L EMK
Sbjct: 484 FNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMK 543
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKA 250
+ I PD+ SY I+ Y R D+ I EM S P ++ TY + K
Sbjct: 544 RRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLL----TYNALIQGLCKN 599
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
D A ++LK+ + D Y LI + + SE
Sbjct: 600 QQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSE 639
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 160/369 (43%), Gaps = 16/369 (4%)
Query: 28 NKTTLYSIISPLGNPGTRIEPEL---DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEV 84
N T ++++ N G R++ L D KNG V I L K+ RF+ LE+
Sbjct: 264 NTFTYNTVMTAYANVG-RVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 322
Query: 85 SDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT------YQTYGALL 138
+ M+R G C + V + + V G E Y + + + K+ TY L+
Sbjct: 323 LEEMSRSG-CT----PNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLI 377
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
+ Y R A + +M G TYN ++ + S+ G + ++++M
Sbjct: 378 SAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFK 437
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
P++ SY + + Y + G+E I +E+ I W + K ++
Sbjct: 438 PNDQSYSLLLQCYAKGGNAAGIESIEKEVYVG-TIFPSWVILRTLVIANFKCRRLEGVEK 496
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALM 318
++ + + + D + +N ++++YA G S+ ++D K + Y ++++
Sbjct: 497 AFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYA 556
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
K E EAEK+LK+ + S D N VI G+C GL++ A+ IL +++ G A
Sbjct: 557 KSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVV 616
Query: 379 SWAVVAAGY 387
++ + GY
Sbjct: 617 TYHTLVGGY 625
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/476 (19%), Positives = 194/476 (40%), Gaps = 64/476 (13%)
Query: 57 GNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRV----- 111
G+++ V ++ L + R+ +AL++ + R+G+ V + V LD+ GR+
Sbjct: 84 GSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGV-VPTIVTYNVVLDVYGRMGRSWP 142
Query: 112 ------------------------------HGFL-SAESYFSNLK--DDEKTYQTYGALL 138
G L A ++F +LK TY ALL
Sbjct: 143 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALL 202
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
+ + +AL ++M++ G +TYN++ Y++ G +E+ L M +K +
Sbjct: 203 QVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLL 262
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
P+ F+Y + +Y ++ + M+ + V + +TY K + +
Sbjct: 263 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGY-VPNVNTYNLIFGMLGKKSRFTAMLE 321
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YITMLEAL 317
+L++ + + +N ++++ G + V R+ + K+ C ++RD Y T++ A
Sbjct: 322 MLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKS-CGVELSRDTYNTLISAY 380
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
+ G A K+ E SG + NA++ G A++I+ +++ G
Sbjct: 381 GRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPND 440
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI--TSILSKL------GD 429
S++++ Y G G + ++ + V W VI T +++ G
Sbjct: 441 QSYSLLLQCYAKGGNAA-GIESIEKEVYVGTIFPSW-----VILRTLVIANFKCRRLEGV 494
Query: 430 EGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
E + Q+V+A VI +++ + +NG E+ DS+K G+ D
Sbjct: 495 EKAFQEVKAQGYKPDLVI------FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPD 544
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ ++L Y + KA F +K+ G++ +TYN +M +Y+K+ + + +L ++K
Sbjct: 513 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLK 572
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKA 250
+ + PD SY IN + + ++ + IL EM + P +V TY + Y
Sbjct: 573 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVV----TYHTLVGGYASL 628
Query: 251 NLIDKASDVL 260
+ ++A +V+
Sbjct: 629 EMFNEAREVV 638
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 160/369 (43%), Gaps = 16/369 (4%)
Query: 28 NKTTLYSIISPLGNPGTRIEPEL---DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEV 84
N T ++++ N G R++ L D KNG V I L K+ RF+ LE+
Sbjct: 355 NTFTYNTVMTAYANVG-RVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 413
Query: 85 SDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT------YQTYGALL 138
+ M+R G C + V + + V G E Y + + + K+ TY L+
Sbjct: 414 LEEMSRSG-CT----PNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLI 468
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
+ Y R A + +M G TYN ++ + S+ G + ++++M
Sbjct: 469 SAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFK 528
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
P++ SY + + Y + G+E I +E+ I W + K ++
Sbjct: 529 PNDQSYSLLLQCYAKGGNAAGIESIEKEVYVG-TIFPSWVILRTLVIANFKCRRLEGVEK 587
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALM 318
++ + + + D + +N ++++YA G S+ ++D K + Y ++++
Sbjct: 588 AFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYA 647
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
K E EAEK+LK+ + S D N VI G+C GL++ A+ IL +++ G A
Sbjct: 648 KSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVV 707
Query: 379 SWAVVAAGY 387
++ + GY
Sbjct: 708 TYHTLVGGY 716
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/476 (19%), Positives = 194/476 (40%), Gaps = 64/476 (13%)
Query: 57 GNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRV----- 111
G+++ V ++ L + R+ +AL++ + R+G+ V + V LD+ GR+
Sbjct: 175 GSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGV-VPTIVTYNVVLDVYGRMGRSWP 233
Query: 112 ------------------------------HGFL-SAESYFSNLK--DDEKTYQTYGALL 138
G L A ++F +LK TY ALL
Sbjct: 234 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALL 293
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
+ + +AL ++M++ G +TYN++ Y++ G +E+ L M +K +
Sbjct: 294 QVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLL 353
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
P+ F+Y + +Y ++ + M+ + V + +TY K + +
Sbjct: 354 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGY-VPNVNTYNLIFGMLGKKSRFTAMLE 412
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YITMLEAL 317
+L++ + + +N ++++ G + V R+ + K+ C ++RD Y T++ A
Sbjct: 413 MLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKS-CGVELSRDTYNTLISAY 471
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
+ G A K+ E SG + NA++ G A++I+ +++ G
Sbjct: 472 GRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPND 531
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI--TSILSKL------GD 429
S++++ Y G G + ++ + V W VI T +++ G
Sbjct: 532 QSYSLLLQCYAKGGNAA-GIESIEKEVYVGTIFPSW-----VILRTLVIANFKCRRLEGV 585
Query: 430 EGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
E + Q+V+A VI +++ + +NG E+ DS+K G+ D
Sbjct: 586 EKAFQEVKAQGYKPDLVI------FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPD 635
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ ++L Y + KA F +K+ G++ +TYN +M +Y+K+ + + +L ++K
Sbjct: 604 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLK 663
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKA 250
+ + PD SY IN + + ++ + IL EM + P +V TY + Y
Sbjct: 664 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVV----TYHTLVGGYASL 719
Query: 251 NLIDKASDVL 260
+ ++A +V+
Sbjct: 720 EMFNEAREVV 729
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 173/398 (43%), Gaps = 29/398 (7%)
Query: 75 RKRFSQALEVSDWMNRKGICVFAPCDHAVQ--LDLIGRVHG-FLSAESYFSNLKDDEKTY 131
++ + +ALEV +W+N + ++P + L ++G+ + L+ E + T
Sbjct: 197 QESWHRALEVYEWLNLRHW--YSPNARMLSTILSVLGKANQEALAVEVFMRAEPSAGNTV 254
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP----D 187
Q Y A++ Y R+ + +K M+E G +++N ++ K G +P +
Sbjct: 255 QVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAM--MPNLAIE 312
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
+L E++ + PD +Y I++ S+LE + +ME+ H D TY + Y
Sbjct: 313 LLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAH-HCQPDLWTYNAMISVY 371
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
+ L KA + E R D + YN L+ +A GN +V +W+ K
Sbjct: 372 GRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWE---EMVKIGFG 428
Query: 308 RD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+D Y TM+ K G++E A ++ ++ + SG + D +I + A +
Sbjct: 429 KDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGV 488
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGK---TERGFQCM--------KAALSVYVEGKGW 413
+ +++ G T +++ + GY AGK E F CM A SV ++
Sbjct: 489 MSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLR 548
Query: 414 KPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR 451
+PK ++ ++ +G D + LRT+ +N+
Sbjct: 549 FNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNK 586
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 148/376 (39%), Gaps = 54/376 (14%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A + F+ + D T T LL + + D+ +++++MG +S + ++
Sbjct: 832 ARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLD 891
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
+++ G +V + MKA FP YR+ + +E +L EME +
Sbjct: 892 AFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEME-EAGFK 950
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
D S + S Y+ K V ++ +E + D YN LI +Y
Sbjct: 951 PDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYC----------- 999
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
RD+ EE ++ E ++G +++ +
Sbjct: 1000 -------------RDH-----------RPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGK 1035
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG---KTERGFQCMKAALSVYVEGK 411
LV+ AE + E+L KG + + + Y ++G K ER F MK A
Sbjct: 1036 QQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDA-------- 1087
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGK---G 467
G +P + ++ G G Q+ E ++ L+ T ++ Y + I A +RNG G
Sbjct: 1088 GVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIG 1147
Query: 468 VDELLDSMKADGIDED 483
+ +L+ MK +G++ D
Sbjct: 1148 IQKLIQ-MKKEGLEPD 1162
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 120/296 (40%), Gaps = 15/296 (5%)
Query: 114 FLSAESYFSNLKDDEKTYQ------------TYGALLNCYVRQRQTDKALSHFRKMKEMG 161
+SA S SNL++ K + TY A+++ Y R + KA F ++ G
Sbjct: 332 LISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRG 391
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
++YN ++ +++ G EKV ++ EM D +Y I+ YG + E
Sbjct: 392 FFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELAL 451
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
+ R+M+S D TY K N I +A+ V+ + + Y+ LI
Sbjct: 452 QLYRDMQSSGRNP-DAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICG 510
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
YA G E +D + R + Y ML+ ++ E + A + KE G + D
Sbjct: 511 YAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLD 570
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG--YFDAGKTER 395
+ ++ V++ ++ D+ E T +++ G Y +A K R
Sbjct: 571 HSLYELMLRTLRKVNKVEDIGRVIRDMEEICGMNTQTISSILVKGECYDEAAKMLR 626
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 46 IEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQL 105
+EP+LD + + ++ K++ QA E+ + + KG C + +
Sbjct: 1019 LEPKLDTY------------KSLVASFGKQQLVEQAEELFEELQSKG-CKLDRSFYHTMM 1065
Query: 106 DLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
+ AE FS +KD E T T L+ Y Q +A +KE G
Sbjct: 1066 KIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSN 1125
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDN 201
LSTL Y+ ++ Y + G Y L +MK + + PD+
Sbjct: 1126 LSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDH 1163
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 160/369 (43%), Gaps = 16/369 (4%)
Query: 28 NKTTLYSIISPLGNPGTRIEPEL---DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEV 84
N T ++++ N G R++ L D KNG V I L K+ RF+ LE+
Sbjct: 355 NTFTYNTVMTAYANVG-RVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 413
Query: 85 SDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT------YQTYGALL 138
+ M+R G C + V + + V G E Y + + + K+ TY L+
Sbjct: 414 LEEMSRSG-CT----PNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLI 468
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
+ Y R A + +M G TYN ++ + S+ G + ++++M
Sbjct: 469 SAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFK 528
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
P++ SY + + Y + G+E I +E+ I W + K ++
Sbjct: 529 PNDQSYSLLLQCYAKGGNAAGIESIEKEVYVG-TIFPSWVILRTLVIANFKCRRLEGVEK 587
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALM 318
++ + + + D + +N ++++YA G S+ ++D K + Y ++++
Sbjct: 588 AFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYA 647
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
K E EAEK+LK+ + S D N VI G+C GL++ A+ IL +++ G A
Sbjct: 648 KSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVV 707
Query: 379 SWAVVAAGY 387
++ + GY
Sbjct: 708 TYHTLVGGY 716
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/476 (19%), Positives = 194/476 (40%), Gaps = 64/476 (13%)
Query: 57 GNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRV----- 111
G+++ V ++ L + R+ +AL++ + R+G+ V + V LD+ GR+
Sbjct: 175 GSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGV-VPTIVTYNVVLDVYGRMGRSWP 233
Query: 112 ------------------------------HGFL-SAESYFSNLK--DDEKTYQTYGALL 138
G L A ++F +LK TY ALL
Sbjct: 234 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALL 293
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
+ + +AL ++M++ G +TYN++ Y++ G +E+ L M +K +
Sbjct: 294 QVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLL 353
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
P+ F+Y + +Y ++ + M+ + V + +TY K + +
Sbjct: 354 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGY-VPNVNTYNLIFGMLGKKSRFTAMLE 412
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YITMLEAL 317
+L++ + + +N ++++ G + V R+ + K+ C ++RD Y T++ A
Sbjct: 413 MLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKS-CGVELSRDTYNTLISAY 471
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
+ G A K+ E SG + NA++ G A++I+ +++ G
Sbjct: 472 GRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPND 531
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI--TSILSKL------GD 429
S++++ Y G G + ++ + V W VI T +++ G
Sbjct: 532 QSYSLLLQCYAKGGNAA-GIESIEKEVYVGTIFPSW-----VILRTLVIANFKCRRLEGV 585
Query: 430 EGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
E + Q+V+A VI +++ + +NG E+ DS+K G+ D
Sbjct: 586 EKAFQEVKAQGYKPDLVI------FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPD 635
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ ++L Y + KA F +K+ G++ +TYN +M +Y+K+ + + +L ++K
Sbjct: 604 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLK 663
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKA 250
+ + PD SY IN + + ++ + IL EM + P +V TY + Y
Sbjct: 664 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVV----TYHTLVGGYASL 719
Query: 251 NLIDKASDVL 260
+ ++A +V+
Sbjct: 720 EMFNEAREVV 729
>gi|8778536|gb|AAF79544.1|AC022464_2 F22G5.3 [Arabidopsis thaliana]
Length = 555
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 103/478 (21%), Positives = 199/478 (41%), Gaps = 38/478 (7%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVS----------------- 85
G + L +W+ +G V G++ I LRK R +ALE+S
Sbjct: 78 GVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALEMSNLGMLLDRNEFLLMKIL 137
Query: 86 ----DWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCY 141
+W+ R+ +++ L+ ++HG E F+ + + + Y L+
Sbjct: 138 LNLMEWIIRERPYRLGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIAC 197
Query: 142 VRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDN 201
+ Q AL + +KM+E+G S L YN ++ S G+ + + L MKA P
Sbjct: 198 LDQGVIRLALEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHV 257
Query: 202 FSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASD 258
+Y I + +++G+ M+ +P+ V +Y A + A L A
Sbjct: 258 STYHILMKLEANEHNIDGVLKAFDGMKKAGVEPNEV----SYCILAMAHAVARLYTVAEA 313
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALM 318
++ E+ + + + L+ LY LG + E+ R W++ + ++ Y+ EA
Sbjct: 314 YTEEIEKSITGDNWSTLDILMILYGRLGKEKELARTWNVIR-GFHHVRSKSYLLATEAFA 372
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
++G + AE++ E + +T N+++ YC +GL++ A + ++ G PN
Sbjct: 373 RVGNLDRAEELWLEMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMT--GNGFKPN 430
Query: 379 S--WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKLGDEGSVQ 434
S + +A G A + + ++ L++ P + T SI+ ++G V+
Sbjct: 431 SITYRHLALGCAKAKLMKEALKNIEMGLNLKTSKSIGSSTPWLETTLSIIECFAEKGDVE 490
Query: 435 DVEAFVAALRTVIPMNRQ--MYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ E ++ NR +Y+A KA ++ L M G D E+ +L
Sbjct: 491 NSEKLFEEVKNA-KYNRYAFVYNALFKAYVKAKVYDPNLFKRMVLGGARPDAESYSLL 547
>gi|302753488|ref|XP_002960168.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
gi|300171107|gb|EFJ37707.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
Length = 585
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 208/467 (44%), Gaps = 42/467 (8%)
Query: 42 PGTRIEPELDNWVKNGNKVRVGELQR------IIRDLRKRKRFSQALEVSDWMNRKGICV 95
PG R+ + NW+ V +GE+ IIR L KR+++ AL+ + ++ +
Sbjct: 68 PGHRVSSYI-NWL-----VDMGEIDSKPMVLSIIRKLTKRQKYKTALDKAFEIDDR---- 117
Query: 96 FAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFR 155
D+ +Q+D V +L AE F+ L DD+KT + Y +L +VR R +KA+
Sbjct: 118 ----DYVLQVDYYAHVDMYL-AEMAFNRLPDDKKTEEAYNYILAGFVRNRMLEKAVVVMD 172
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI--FPDNFSYRICINSYGA 213
K++E+G+ +S + + L+ G ++P ++ E ++ + P + + I
Sbjct: 173 KIRELGL-VSAFSLEQMTLLFHYLGLERRIPALVVEARSLGLHFHPHFLNTHLWIKR--R 229
Query: 214 RSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE-----RLE 268
DL GME I+ E+E + TY A YI+A L +KA L AE R +
Sbjct: 230 HGDLSGMEEIVEELELMGRS--NAWTYIFIASAYIQAGLPEKAHAALGAAEAGIRNGRFK 287
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
++ + YN ++ LY L + + R+W + + ++ +++ M+EAL G AE+
Sbjct: 288 KQRKV-YNKILLLYGLLKDTEGIERVWGILNSRPLVAVH-NHLFMIEALGSAGNIGRAEE 345
Query: 329 VLKEW-ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA-TTPNSWAVVAAG 386
+ +E + G + R + Y NGL+ A +L D K KA P + G
Sbjct: 346 IFEELRKCRGVRKEYRQFIVMAGAYTKNGLMDKATEVLYDYPAKYKARPVPELYHYFIKG 405
Query: 387 YFDAGKTERGFQCMKAALSV--YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
Y + + + + S+ Y K W + + ++S + G V A +
Sbjct: 406 YIKRNEKDWAIEAYEEGQSLVRYRSTKLWY---ETMLEVMSIYAERGDVTSALAMFKHCK 462
Query: 445 TVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
+ +M+ K + + L+ M G + ++E +E+++
Sbjct: 463 ACKHRDIRMFTLLFKTYVVAKEPAHGLIKRMVMLGFEPNDEIRELIL 509
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 156/352 (44%), Gaps = 9/352 (2%)
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
++R+ D L FR+M + G+ ++ + ++ + G+ EK ++ E K I P+ +
Sbjct: 182 KRRRIDLCLEFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAY 241
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
+Y IN+Y D G+E IL+ M+ + +V + TY +K ++ + +
Sbjct: 242 TYNTIINAYLKHRDFSGVEKILKVMK-KDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDE 300
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGE 322
ER + D Y LIS GN L+D + Y +++ + K+GE
Sbjct: 301 MRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGE 360
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
AE ++ E + G + + N +I GYC G++ A I + + +KG +
Sbjct: 361 MGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNT 420
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE-AFVA 441
+A+ + + + K L +EG G + T+++ EG+V++ + FV
Sbjct: 421 IASCFNRLKRYDEA----KQWLFRMMEG-GVRLSTVSYTNLIDVYCKEGNVEEAKRLFVE 475
Query: 442 ALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
+ N Y+ I A + G K +L +MKA+G+D D T L+
Sbjct: 476 MSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLI 527
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 156/363 (42%), Gaps = 11/363 (3%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
II K + FS ++ M + G+ V+ + + ++L + E F +++
Sbjct: 246 IINAYLKHRDFSGVEKILKVMKKDGV-VYNKVTYTLLIELSVKNGKMNDVEKLFDEMRER 304
Query: 128 --EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
E Y +L++ R+ +A F ++ E G+ S+ TY ++ K G+
Sbjct: 305 GIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAA 364
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
++ EM++K + + IN Y + ++ +I ME + D T + A
Sbjct: 365 EILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQA-DVFTCNTIAS 423
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
+ + D+A L + E + + Y LI +Y GN E RL+ +E ++ +
Sbjct: 424 CFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLF-VEMSSKEVQ 482
Query: 306 INR-DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
N Y M+ A K G+ +EA K+ + +G D+ ++I G C V A +
Sbjct: 483 PNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRL 542
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
++ KG ++ V+ +G AGK++ F L ++ KG+ D KV T+++
Sbjct: 543 FSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF-----GLYDEIKRKGYTIDNKVYTALI 597
Query: 425 SKL 427
+
Sbjct: 598 GSM 600
>gi|302804432|ref|XP_002983968.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
gi|300148320|gb|EFJ14980.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
Length = 598
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 205/466 (43%), Gaps = 40/466 (8%)
Query: 42 PGTRIEPELDNWVKNGNKVRVGELQR------IIRDLRKRKRFSQALEVSDWMNRKGICV 95
PG R+ + NW+ V +GE+ IIR L KR+++ AL+ + ++ +
Sbjct: 81 PGHRVASYI-NWL-----VDMGEIDSKPMVLSIIRKLTKRQKYKTALDKAFEIDDR---- 130
Query: 96 FAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFR 155
D+ +Q+D V +L AE F+ L DD+KT + Y +L YVR R +KA+
Sbjct: 131 ----DYVLQVDYYAHVDMYL-AEMAFNRLPDDKKTEEAYNYILAGYVRNRMLEKAVVVMD 185
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI--FPDNFSYRICINSYGA 213
K++E+G+ +S + + L+ G ++P ++ E ++ + P + + I
Sbjct: 186 KIRELGL-VSAFSLEQMTLLFHYLGLERRIPALVVEARSLGLHFHPHFLNTHLWIKR--R 242
Query: 214 RSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE----Q 269
DL GME I+ E+E + TY A YI+A +KA L AE + +
Sbjct: 243 HGDLSGMEEIVEELELMGRS--NAWTYIFIASAYIQAGFPEKAHAALGAAEAGIRNGRFK 300
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
K YN ++ LY L + + R+W + + ++ +++ M+EAL G AE++
Sbjct: 301 KQRKVYNKILLLYGLLKDMEGIERVWGILNSRPLVAVH-NHLFMIEALGSAGNIGRAEEI 359
Query: 330 LKEW-ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA-TTPNSWAVVAAGY 387
+E + G + R + Y NGL+ A +L D K KA P + GY
Sbjct: 360 FEELRKCRGVRKEYRQFIVMAGAYTKNGLMDKATEVLYDYPAKYKARPVPELYHYFIKGY 419
Query: 388 FDAGKTERGFQCMKAALSV--YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
+ + + + S+ Y K W + + ++S + G V A +
Sbjct: 420 IKRNEKDWAIEAYEEGQSLVRYRSTKLWY---ETMLEVMSIYAERGDVTSALAMFKHCKA 476
Query: 446 VIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
+ +M+ K + + L+ M G + ++E +E+++
Sbjct: 477 CKHRDIRMFTLLFKTYVVAKEPAHGLIKRMVMLGFEPNDEIRELIL 522
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 160/359 (44%), Gaps = 31/359 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y ALL Y + AL F+ +K+ G+ ++Y ++ Y ++GQ EK + EM
Sbjct: 369 SYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEM 428
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ--PHIVLDWSTYASAAHFYIKA 250
+ + P+ SY I++YG+ + +L EME P V+ ST +A +
Sbjct: 429 RKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACG---RC 485
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
I K +L+ A+ R + + + YN I Y + G+ + L L+ + + +N D
Sbjct: 486 RQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMAS---NVNPDA 542
Query: 311 IT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP------NAVIIGYCNNGLVQNA 361
+T ++ L K+G++ E+ K ++ D RIP +++I Y G + A
Sbjct: 543 VTYNILISGLCKVGKYAESLKFFED------MVDLRIPLTKEVYSSLICSYVKQGKLTEA 596
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
E+ + E G ++ + Y D G + K +EG +PD + +
Sbjct: 597 ESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKE-----MEGNTVQPDAIICS 651
Query: 422 SILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKAN--IRNGKGVDELLDSMKA 477
S++ L + V + ++ IP+N++ Y I + +R+ K E+++ + +
Sbjct: 652 SLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDS 710
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 158/399 (39%), Gaps = 46/399 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++N KAL +KM G+ +T+N ++ + QY K M
Sbjct: 227 TYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMM 286
Query: 193 KAKNIFPDNFSYRICIN------SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
K NI PD F+ I I+ YG E +E++ E + D TY S H
Sbjct: 287 KGANIAPDTFTLNIVIHCLVKDGQYG-----EAIELLNSMREKRTQCPPDVVTYTSIMHS 341
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y ++ V + + + YN L+ YAS G ++ L ++ L K R
Sbjct: 342 YYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPD 401
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y T+L A + G+ E+A + KE + + NA+I Y + G+ + A ++L
Sbjct: 402 VVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLH 461
Query: 367 DLVEKG--KATTPNSWAVVAAG----------YFDAGKTERGFQ----CMKAALSVYVE- 409
++ + G S + A G +A K+ RG + C + + Y+
Sbjct: 462 EMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKS-RGIKLNIVCYNSGIGSYLNF 520
Query: 410 ---GKGWK-----------PDPKVITSILSKLGDEGS-VQDVEAFVAALRTVIPMNRQMY 454
GK + PD ++S L G + ++ F + IP+ +++Y
Sbjct: 521 GDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVY 580
Query: 455 HAFIKANIRNGK--GVDELLDSMKADGIDEDEETKEILV 491
+ I + ++ GK + SMK G D T ++
Sbjct: 581 SSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMI 619
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 141/362 (38%), Gaps = 60/362 (16%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
YG ++ + R Q D+A F +M+E YN ++ +++ GQ+ +++ +M
Sbjct: 158 YGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDML 217
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
I P +Y IN+ GA +W
Sbjct: 218 RAAIPPSRTTYNNVINACGAAG--------------------NWK--------------- 242
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
KA ++ KK D + +N ++S + + S+ + +++ K A I D T+
Sbjct: 243 -KALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGA---NIAPDTFTL 298
Query: 314 ---LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII------GYCNNGLVQNAEAI 364
+ L+K G++ EA ++L S T+ P V+ Y G V++ +A+
Sbjct: 299 NIVIHCLVKDGQYGEAIELLN----SMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAV 354
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+ +V +G PN +V+ RG + ++ G +PD T++L
Sbjct: 355 FDMMVAEG--VKPN---IVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLL 409
Query: 425 SKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGID 481
+ G G + EAF + N Y+A I A G K LL M+ DGI
Sbjct: 410 NAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIP 469
Query: 482 ED 483
D
Sbjct: 470 PD 471
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 11/215 (5%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T + Y +L+ YV+Q + +A S F MKE G LTY ++ Y+ G + D+
Sbjct: 576 TKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLF 635
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM+ + PD IC + A + E +L+ ME + + A+F I
Sbjct: 636 KEMEGNTVQPDAI---ICSSLMEALNRGSQHERVLQLMELMKEKCIPLN---QKAYFEII 689
Query: 250 AN---LID--KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
A+ L D AS++++ + L N L++ G +++L+ ++C
Sbjct: 690 ASCSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCST 749
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
Y +L L+ +G+ + +VL+ E +G S
Sbjct: 750 VGVSTYTVLLRNLLAVGKWRKYIEVLQWMEDAGVS 784
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 183/406 (45%), Gaps = 28/406 (6%)
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
GIC D ++ LDL+ ++ N+K D TY T +++ R D A+
Sbjct: 179 GICKSG--DTSLALDLLRKMDE--------RNVKADVFTYST---IIDSLCRDGCIDAAI 225
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
S F++M+ GI S +TYN ++ K G++ +L +M ++ I P+ ++ + I+ +
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVF 285
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
L+ + +EM ++ I + TY S Y N + +A+++L D
Sbjct: 286 VKEGKLQEANELYKEMITK-GISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPD 344
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEK 328
+ + LI Y + E ++L+ + KR + + +T +++ + G+ E AE+
Sbjct: 345 IVTFTSLIKGYCKVKRVDEGMKLF---RKISKRGLVANTVTYSILVQGFCQSGKLEIAEE 401
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ +E G D ++ G C+NG ++ A I EDL + + ++ G
Sbjct: 402 LFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMC 461
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVI 447
GK E + L + KG KP+ T ++S L +GS+ + + +
Sbjct: 462 KGGKVEDAWN-----LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 516
Query: 448 PMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
N Y+ I+A++R+G +L++ MK+ G D + ++++
Sbjct: 517 EPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 562
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 93/446 (20%), Positives = 173/446 (38%), Gaps = 38/446 (8%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGI------------CVFAPCDHAVQLDLIGRV 111
+ R + K+F+ L+ M GI C C ++G+V
Sbjct: 67 DFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKV 126
Query: 112 HGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
Y E T+ L+N + + +A+ +M E G + +TYN
Sbjct: 127 MKL----GY-------EPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNS 175
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP 231
I+ K+G D+L +M +N+ D F+Y I+S ++ + +EME++
Sbjct: 176 IVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK- 234
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
I TY S KA + +LK R + I +N LI ++ G E
Sbjct: 235 GIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEA 294
Query: 292 LRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
L+ K + I+ + IT +++ EA +L + S D ++
Sbjct: 295 NELY---KEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSL 351
Query: 349 IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYV 408
I GYC V + + ++G +++++ G+ +GK E + + +S+
Sbjct: 352 IKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSL-- 409
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKG 467
G PD +L L D G ++ +E F ++ + ++ MY I+ + GK
Sbjct: 410 ---GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKV 466
Query: 468 VD--ELLDSMKADGIDEDEETKEILV 491
D L S+ G+ + T +++
Sbjct: 467 EDAWNLFCSLPCKGVKPNVMTYTVMI 492
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 172/403 (42%), Gaps = 53/403 (13%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP---CDHAVQLDLIGRVHGFLSAESY 120
+L + + R+++++ A+ + +W+ + + F P C + + +D GR + AE+
Sbjct: 67 DLMETVAEFRRQRKWRSAIVIYEWILQGSM--FKPDVGCFNML-MDAYGRTKQWTEAENT 123
Query: 121 FSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
F +K + T ++ L+ Y R Q ++A +MKE + +TYN + + +K
Sbjct: 124 FHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNK 183
Query: 179 TGQYEKVPDVLTEM--------------------------KAKNIF---------PDNFS 203
+G ++ DV EM KA+++F P F+
Sbjct: 184 SGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFT 243
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
Y IN++ + E I E++S V D TY + Y + A +V +
Sbjct: 244 YTALINAHAREGNCVRAEEIFAELQSV-GFVPDIYTYNALLEAYSRGGHPAGAKEVFETM 302
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEH 323
E + D + YN LI + G S+ ++D K + + +I +L A +K G
Sbjct: 303 LEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRV 362
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWA 381
+AE ++ E G DT + N+++ Y N+G + E++ E + +G P+ +
Sbjct: 363 TDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESM--QGSVCKPDIITLN 420
Query: 382 VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+ Y G ER + + +E KG+ PD TS++
Sbjct: 421 TLINVYAQGGYIERAEEIFNS-----LESKGFTPDVMSWTSLM 458
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 147/365 (40%), Gaps = 52/365 (14%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L++ Y R +Q +A + F MK+ + ++N +M YS+ GQ E+ VL EMK
Sbjct: 104 FNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMK 163
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ--PHIVLDWSTYASAAHFYIKAN 251
N P +Y + + E + REM+++ P V +T+ + Y KA+
Sbjct: 164 ESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAV---NTFTLMINIYGKAH 220
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
KA + + + L Y LI+ +A GN C R
Sbjct: 221 HSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGN--------------CVR------- 259
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
AE++ E + G D NA++ Y G A+ + E ++E
Sbjct: 260 --------------AEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEA 305
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGD 429
G S+ ++ + AG + A ++Y K G+KP K +LS
Sbjct: 306 GVKADHVSYNILIDAFGRAG-------LISDAQAIYDSMKKVGFKPTMKSHILLLSAFVK 358
Query: 430 EGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEET 486
G V D E FV L ++ + + M+++ + A +G+ ++ L +SM+ D T
Sbjct: 359 AGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIIT 418
Query: 487 KEILV 491
L+
Sbjct: 419 LNTLI 423
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 155/349 (44%), Gaps = 17/349 (4%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
ALS F+ M G++ S TYN ++ ++ G E + EMKAK + PD +Y I+
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294
Query: 210 SYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
YG L G + EM+ +P ++ TY S + + K I +A + L ++R
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDVI----TYNSLINCFCKFERIPQAFEYLHGMKQR 350
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEE 325
Q + + Y+ LI + G E + + D+ + + Y ++++A K+G+ E
Sbjct: 351 GLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPN-EFTYTSLIDANCKIGDLNE 409
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
A K+ E + +G + + A++ G C +G ++ AE + L++ G + +
Sbjct: 410 AFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFH 469
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
GY A E+ ++ + K KPD + + + L + ++D A + +
Sbjct: 470 GYIKAKMMEKAMDILEE-----MNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMD 524
Query: 446 V-IPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
+ N +Y I A + GK + LL M+ GI T +L+
Sbjct: 525 CGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLI 573
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 126/308 (40%), Gaps = 8/308 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ALL+ + +A F + + G L+ Y + Y K EK D+L EM
Sbjct: 428 TYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEM 487
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
KN+ PD Y I ++++E ++REM + + Y + Y K
Sbjct: 488 NKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREM-MDCGLTANSYIYTTLIDAYFKVGK 546
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYI 311
+A ++L++ ++ + + Y LI +G + +R +D + + + I Y
Sbjct: 547 TTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNI-MIYT 605
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+++ L K EEA+ + E G S D + ++I G +G A ++ +VE
Sbjct: 606 ALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEI 665
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G ++ + G+ G+ + + L KG PD + +L K + G
Sbjct: 666 GMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLR-----KGIIPDQVLCICLLRKYYELG 720
Query: 432 SVQDVEAF 439
+ + A
Sbjct: 721 DINEALAL 728
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 107/259 (41%), Gaps = 22/259 (8%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
NLK D YG + RQ + + +++ R+M + G+ ++ Y ++ Y K G+
Sbjct: 491 NLKPD---LLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKT 547
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWST 239
+ ++L EM+ I +Y + I+ ++ M QP+I++
Sbjct: 548 TEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMI---- 603
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--- 296
Y + K + +++A ++ + ++ D + Y LI GN E L L +
Sbjct: 604 YTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMV 663
Query: 297 ---LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
+E C Y +++ + G+ + A+ +L E G D + ++ Y
Sbjct: 664 EIGMELDLCA------YTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYY 717
Query: 354 NNGLVQNAEAILEDLVEKG 372
G + A A+ +D+ +G
Sbjct: 718 ELGDINEALALHDDMARRG 736
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 157/352 (44%), Gaps = 9/352 (2%)
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
++R+ D L FR+M + G+ ++ + ++ + G+ EK ++ E K I P+ +
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
+Y IN+Y + D G+E +L+ M+ + +V + TY +K + A + +
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMK-KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDE 319
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGE 322
ER + D Y LIS GN L+D + Y +++ + K+GE
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
AE ++ E + G + + N +I GYC G+V A I + + +KG +
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT 439
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE-AFVA 441
+A+ + + + K L +EG G K T+++ EG+V++ + FV
Sbjct: 440 IASCFNRLKRYDEA----KQWLFRMMEG-GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVE 494
Query: 442 ALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
+ N Y+ I A + G K +L +M+A+G+D D T L+
Sbjct: 495 MSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
Query: 127 DEKTYQ----TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
++K +Q T + +C+ R ++ D+A +M E G+ LST++Y +++ +Y K G
Sbjct: 426 EQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNV 485
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
E+ + EM +K + P+ +Y + I +Y + ++ + ME+ + D TY S
Sbjct: 486 EEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEAN-GMDPDSYTYTS 544
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
H A+ +D+A + + + ++ + Y +IS + G E L+D K
Sbjct: 545 LIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Query: 303 KRYINRDYITMLEAL 317
N+ Y ++ ++
Sbjct: 605 YTIDNKVYTALIGSM 619
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 138/365 (37%), Gaps = 76/365 (20%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++N YV+QR + MK+ G+ + +TY +M L K G+ + EM
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 193 KAKNIFPDNFSYRICIN----------------------------SYGARSD-------L 217
+ + I D Y I+ +YGA D +
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD------ 271
EI++ EM+S+ + + + + Y + ++D+AS + E++ Q D
Sbjct: 381 GAAEILMNEMQSK-GVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT 439
Query: 272 -----------------------------GIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
+ Y LI +Y GN E RL+ +
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+ Y M+ A K G+ +EA K+ E +G D+ ++I G C V A
Sbjct: 500 VQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAM 559
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
+ ++ KG ++ V+ +G AGK++ F L ++ KG+ D KV T+
Sbjct: 560 RLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF-----GLYDEMKRKGYTIDNKVYTA 614
Query: 423 ILSKL 427
++ +
Sbjct: 615 LIGSM 619
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 153/346 (44%), Gaps = 21/346 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +LL R + A F M + GI TYN ++ K GQ + ++++EM
Sbjct: 298 TFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEM 357
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
KNI P+ +Y I+ Y L+ + EM+ + LD +Y + Y K
Sbjct: 358 PTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLG-VGLDRVSYNTLLSVYAKLGR 416
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
++A DV K+ E +KD + YN L++ Y EV R+++ K Y T
Sbjct: 417 FEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYST 476
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ K G ++EA +V +E++ +G D + +A+I C NGLV+++ +L+++ ++G
Sbjct: 477 LIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEG 536
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCM------KAALSV----------YVEGKGWKPD 416
PN V DA QC+ AL V +E + +
Sbjct: 537 --IRPN--VVTYNSIIDAFGRSASAQCVVDDSGETTALQVESLSSIVVQEAIESQAADKE 592
Query: 417 PKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANI 462
I I KL E + + + + ++ + ++M+ IK N+
Sbjct: 593 DNRIIEIFGKLAAEKACEAKNSGKQEILCILGVFQKMHELKIKPNV 638
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 167/367 (45%), Gaps = 19/367 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +L R+ +A F +M + G+ ++++ I+ ++S+ G+ + +M
Sbjct: 331 TFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKM 390
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PD Y I IN Y D+ G + EM + V+D TY + + + +
Sbjct: 391 KGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVER-GCVMDVVTYNTLLNGLCRGKM 449
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
+D A ++ K+ ER D LI Y GN ++ L L++ T R + D
Sbjct: 450 LDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFE---TMTLRSLKPDVVT 506
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII-GYCNNGLVQNAEAILEDL 368
Y T+++ K+GE E+A+++ + +S + + I +++I G+C+ GLV A + +++
Sbjct: 507 YNTLMDGFCKVGEMEKAKELWYDM-ISREIFPSYISFSILINGFCSLGLVSEAFRLWDEM 565
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
EKG T + + GY AG + + +S +G PD ++++
Sbjct: 566 KEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMIS-----EGVPPDCITYNTLINSFV 620
Query: 429 DEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDE 484
E + + + R ++P N Y+A + R+G+ + +L M GI+ D+
Sbjct: 621 KEENFDRAFFLINNMEERGLLP-NLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDK 679
Query: 485 ETKEILV 491
T L+
Sbjct: 680 STYTSLI 686
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 132/339 (38%), Gaps = 43/339 (12%)
Query: 117 AESYFSNLKDDEKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A +YF +K T Y L+N Y R AL +M E G + +TYN ++
Sbjct: 383 ALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLN 442
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
+ + ++ EM + +FPD ++ I+ Y ++ + L E + +
Sbjct: 443 GLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTK-ALSLFETMTLRSLK 501
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
D TY + + K ++KA ++ R I ++ LI+ + SLG SE RL
Sbjct: 502 PDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRL 561
Query: 295 WDLEK------------TACKRYINR-----------------------DYITMLEALMK 319
WD K T K Y+ Y T++ + +K
Sbjct: 562 WDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVK 621
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
+ A ++ E G + NA++ G+ +G +Q AE +L +++KG ++
Sbjct: 622 EENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKST 681
Query: 380 WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
+ + GY + F+ L +G+ PD K
Sbjct: 682 YTSLINGYVSKDNMKEAFRVHDEMLQ-----RGFVPDDK 715
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 5/266 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N Y R+ +A M G+ TYN ++ K G YE+ VL EM
Sbjct: 261 TYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEM 320
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P+ ++ + + D+ E + EM Q +V D +++S + +
Sbjct: 321 LGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEM-LQRGVVPDLISFSSIVGVFSRNGE 379
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+ +A +K + D + Y LI+ Y + S L++ + +E+ + Y
Sbjct: 380 LGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVT--Y 437
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T+L L + ++A+++ KE G D +I GYC +G + A ++ E +
Sbjct: 438 NTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTL 497
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERG 396
+ ++ + G+ G+ E+
Sbjct: 498 RSLKPDVVTYNTLMDGFCKVGEMEKA 523
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 7/144 (4%)
Query: 79 SQALEVSDWMNRKGI-CVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQ---TY 134
S+A + D M KGI C+ ++ L G LS + F N E TY
Sbjct: 556 SEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRA---GNLSKANDFLNTMISEGVPPDCITY 612
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
L+N +V++ D+A M+E G+ + +TYN I+ +S+ G+ ++ VL +M
Sbjct: 613 NTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMID 672
Query: 195 KNIFPDNFSYRICINSYGARSDLE 218
K I PD +Y IN Y ++ +++
Sbjct: 673 KGINPDKSTYTSLINGYVSKDNMK 696
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 69/399 (17%), Positives = 156/399 (39%), Gaps = 18/399 (4%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+IR + ++ + E + ++G CV +A+ L I +V A + +
Sbjct: 160 LIRTYVQARKLREGSEAFQLLRKRGFCVSINACNAL-LGAIVKVGWVDLAWKVYEDFVKS 218
Query: 128 EKTYQTY--GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
Y ++N + + D + +M+E G+ +TYN ++ Y + G +
Sbjct: 219 GNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEA 278
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
++ M K + P F+Y IN E + +L EM + + +T+
Sbjct: 279 FGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGV-GLCPNAATFNPMLV 337
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
+ + +A V + +R D I ++ ++ +++ G L ++ K
Sbjct: 338 ESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVP 397
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y ++ + + A K+ E G D N ++ G C ++ +A+ +
Sbjct: 398 DTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELF 457
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSI 423
+++VE+G + + GY G M ALS++ + + KPD ++
Sbjct: 458 KEMVERGVFPDFYTLTTLIHGYCKDGN-------MTKALSLFETMTLRSLKPDVVTYNTL 510
Query: 424 LSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANI 462
+ G ++ + + ++R+++ ++I +I
Sbjct: 511 MDGFCKVGEMEKAKELWYDM-----ISREIFPSYISFSI 544
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 117/499 (23%), Positives = 187/499 (37%), Gaps = 82/499 (16%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++R L R R + AL V D M R+G P H + L+ R GF SA +L
Sbjct: 128 VVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVI-LEAACRGGGFRSAVRVLEDLHAR 186
Query: 128 EKTYQTYGA--LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---CL------- 175
+LN Q DKAL R + G ++YN ++ C+
Sbjct: 187 GCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 246
Query: 176 -------------------------YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+ G +E+V +VL +M PD Y I+
Sbjct: 247 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDG 306
Query: 211 YGARSDLEGMEIILREMES---QPHIV-------------------------------LD 236
L+ IL M S +P++V LD
Sbjct: 307 ICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLD 366
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
T+ F+ + L+D+ ++L++ D I Y +I+ + G E + L
Sbjct: 367 DVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 426
Query: 297 LEKTACKRYINR-DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
TAC N Y +L+ L +AE ++ + G + N +I C
Sbjct: 427 -SMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 485
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
GLV+ A +L+ ++ G + S++ V G AGKT+ + L+V V KG P
Sbjct: 486 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALE----LLNVMVN-KGMSP 540
Query: 416 DPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKG--VDELL 472
+ + +SI S L EG + V + F T I + +Y+A I + + G+ E L
Sbjct: 541 NTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFL 600
Query: 473 DSMKADGIDEDEETKEILV 491
M + G +E T IL+
Sbjct: 601 AYMVSSGCVPNESTYTILI 619
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 80/214 (37%), Gaps = 15/214 (7%)
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
YN +++ Y G RL Y Y ++ AL G +A VL E
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVPVPPNAY---TYFPVVRALCARGRIADALAVLDEMP 149
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G + + + ++ C G ++A +LEDL +G A + +V D G +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE---GSVQDVEAFVAALRTVIPMNR 451
+ ++ S G +PD ++L L G VQ E +R P N
Sbjct: 210 KALHLLRDLPSF-----GCEPDVVSYNAVLKGLCMAKRWGCVQ--ELMEEMVRMACPPNI 262
Query: 452 QMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
++ I RNG + V E+L M G D
Sbjct: 263 VTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPD 296
>gi|302801862|ref|XP_002982687.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
gi|300149786|gb|EFJ16440.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
Length = 541
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 197/450 (43%), Gaps = 53/450 (11%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L +W GN V + ++I L R + Q +++ +W+ + DH V++D
Sbjct: 129 LKDWQSEGNLVTRDVIYKLIIRLHARMFYFQGMKLMNWVIVEKPFQLTDFDHLVRMDFHT 188
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
R + F+ ++D KT Y LL + + ++AL ++MKE+ + + +Y
Sbjct: 189 RELKVDKVLTCFNRIQD--KTETCYVLLLQAFATAHRKERALDVLKQMKELVLITNPYSY 246
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAK-NIFPDNFSYRICINSYGARSDLEGMEIILREME 228
N ++ +Y + G ++ ++ E+K K N+ PD F+Y +N +R L GM+ + +E
Sbjct: 247 NLVIAMYLRMGLIDEAKEMFAELKDKSNVAPDAFTY---LNLLKSRDAL-GMDDLEDTIE 302
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
F++ + I G + LI LY ++G K
Sbjct: 303 E----------------FFLDVDKIP----------------TGFEWRNLIRLYGAMGKK 330
Query: 289 SEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
+V RLW +K + ++ +E+ GE ++ E++ K+ E R +
Sbjct: 331 KDVERLWREQKRVAEYMPESYFLAAIESFGMNGEMKQFEEICKQLEAQNQKLSERQCFTM 390
Query: 349 IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK----TERGFQCMKAAL 404
+ YC NGL+ +AE + + E + + +GY + + TE+ + + L
Sbjct: 391 LKVYCMNGLMNDAERTAKKMEELRYKLGFKGYHYLVSGYVNRHQFVKATEKFSEAEEKGL 450
Query: 405 SVYVEGKGWKPDPKVIT--SILSKLGDEGSVQDVEAFV-AALRTV-IPMNRQMYHAFIKA 460
+ KG+K +P +T ++L + ++ E V L+T P + ++++A +K
Sbjct: 451 A-----KGFK-NPLFVTVLTLLEAYAGKKELEKAEEMVEKVLKTKHYPYDIRLFNALLKV 504
Query: 461 NIRNGKGVDELLDSMKADGIDEDEETKEIL 490
R K + + +K ++ +E T ++L
Sbjct: 505 YRRCQKPAWGIENRIKEAKLEPNETTHKLL 534
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 195/449 (43%), Gaps = 39/449 (8%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSN 123
+L +++ L + +A+ + +W+ DH V +++ R+ G S S +
Sbjct: 138 DLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQV-IEIFVRILGRESQYSVAAK 196
Query: 124 LKD---------DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
L D D + Y T +L+ Y R + +KA+ F +MKEMG + + +TYN I+
Sbjct: 197 LLDKIPLQEYLLDVRAYTT---ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 175 LYSKTGQ-YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---Q 230
++ K G+ + K+ VL EM++K + D F+ +++ L + E++S +
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
P V TY + + KA + +A VLK+ EE D + YN L++ Y G E
Sbjct: 314 PGTV----TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKE 369
Query: 291 VLRLWDL--EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
+ ++ +K I Y T+++A K G+ +EA K+ + +G +T NAV
Sbjct: 370 AAGVIEMMTKKGVMPNAIT--YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Query: 349 IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK---TERGFQCMKAALS 405
+ +L D+ G + +W + A + G R F+ MK+
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC-- 485
Query: 406 VYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRN 464
G++PD +++S G GS D + R Y+A + A R
Sbjct: 486 ------GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Query: 465 G--KGVDELLDSMKADGIDEDEETKEILV 491
G + + ++ MK+ G E + +++
Sbjct: 540 GDWRSGENVISDMKSKGFKPTETSYSLML 568
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 183/445 (41%), Gaps = 41/445 (9%)
Query: 76 KRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQT 133
+ + + L V D M KG+ F + L R A+ +F+ LK E T
Sbjct: 260 RSWRKILGVLDEMRSKGL-KFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT 318
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y ALL + + +ALS ++M+E ++TYN+++ Y + G ++ V+ M
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 194 AKNIFPDNFSYRICINSYG-ARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P+ +Y I++YG A + E +++ E+ V + TY + K +
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA--GCVPNTCTYNAVLSLLGKKSR 436
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YI 311
++ +L + + +N +++L + G V R++ E +C +RD +
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFR-EMKSCGFEPDRDTFN 495
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T++ A + G +A K+ E +G + NA++ G ++ E ++ D+ K
Sbjct: 496 TLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK 555
Query: 372 GKATTPNSWAVVAAGYFDAGK---TER-----------------------GFQCMKAALS 405
G T S++++ Y G ER F+C A S
Sbjct: 556 GFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGS 615
Query: 406 ----VYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT-VIPMNRQMYHAFIKA 460
+ G+KPD + S+LS E + ++R + + Y++ +
Sbjct: 616 ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDM 675
Query: 461 NIRNGK--GVDELLDSMKADGIDED 483
+R G+ +E+L +++ + D
Sbjct: 676 YVRRGECWKAEEILKTLEKSQLKPD 700
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 126/323 (39%), Gaps = 55/323 (17%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ALLN R+ + MK G + +Y+ ++ Y+K G Y + + +
Sbjct: 528 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRI 587
Query: 193 KAKNIFPDNFSYR-ICINSYGARSDLEGME---IILREMESQPHIVLDWSTYASAAHFYI 248
K IFP R + + ++ R+ L G E + ++ +P +V+ + S +
Sbjct: 588 KEGQIFPSWMLLRTLLLANFKCRA-LAGSERAFTLFKKHGYKPDMVI----FNSMLSIFT 642
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
+ N+ D+A +L+ E D + YN L+ +Y
Sbjct: 643 RNNMYDQAEGILESIREDGLSPDLVTYNSLMDMY-------------------------- 676
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
++ GE +AE++LK E S D N VI G+C GL+Q A +L ++
Sbjct: 677 ---------VRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 369 VEKGKATTPNSWAVVAAGYFDAG---KTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
E+G ++ +GY G + E +CM +P+ ++
Sbjct: 728 TERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK--------NDCRPNELTFKMVVD 779
Query: 426 KLGDEGSVQDVEAFVAALRTVIP 448
G + FV+ ++T P
Sbjct: 780 GYCRAGKYSEAMDFVSKIKTFDP 802
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 156/370 (42%), Gaps = 17/370 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ + + + +A F+ MK+ G+ TYN + K G+ E+ ++ +M
Sbjct: 253 TYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKM 312
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P+ +Y I+ Y + DL+ EM S+ I+ TY H
Sbjct: 313 LEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISK-GIMASLVTYNLFIHALFMEGR 371
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A +++K+ E+ D + +N LI+ Y G+ L D + Y +
Sbjct: 372 MGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTS 431
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ L K +EA+ + + + G D + NA+I G+C NG + A +L+++
Sbjct: 432 LIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMK 491
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
++ + GY GK E Q + ++ +G KPD +++S G
Sbjct: 492 VLPDEITYNTLMQGYCREGKVEEARQLLDE-----MKRRGIKPDHISYNTLISGYSKRGD 546
Query: 433 VQDV-----EAFVAALRTVIPMNRQMYHAFIKANIRN--GKGVDELLDSMKADGIDEDEE 485
++D E I Y+A I+ +N G+ +ELL M + GI D+
Sbjct: 547 MKDAFRVRDEMMTTGFDPTI----LTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDS 602
Query: 486 TKEILVCTME 495
T ++ ME
Sbjct: 603 TYLSIIEAME 612
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 140/312 (44%), Gaps = 21/312 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL++ Y + DKA ++ +M GI S +TYN + G+ +++ EM
Sbjct: 323 TYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEM 382
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ K + PD ++ I IN Y D + +L EM QP +V TY S + K
Sbjct: 383 REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLV----TYTSLIYVLGK 438
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
N + +A + K ++ D I +N LI + + GN + R + L K + D
Sbjct: 439 RNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGN---IDRAFQLLKEMDNMKVLPD 495
Query: 310 ---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y T+++ + G+ EEA ++L E + G D N +I GY G +++A + +
Sbjct: 496 EITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRD 555
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+++ G T ++ + G + E + +K +S KG PD SI+
Sbjct: 556 EMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVS-----KGITPDDSTYLSIIEA 610
Query: 427 LGDEGSVQDVEA 438
+ +V D+E
Sbjct: 611 M---ETVDDLEG 619
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 80/178 (44%), Gaps = 20/178 (11%)
Query: 61 RVGELQRIIRDLRKRKRFSQALEVSDWMNRKGIC-----VFAPCDHAVQ----------- 104
R+G+ +I+++R++ A+ + +N C F D V
Sbjct: 371 RMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYT 430
Query: 105 --LDLIGRVHGFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEM 160
+ ++G+ + A++ FS ++ + + AL++ + D+A ++M M
Sbjct: 431 SLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNM 490
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
+ +TYN +M Y + G+ E+ +L EMK + I PD+ SY I+ Y R D++
Sbjct: 491 KVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMK 548
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 191/500 (38%), Gaps = 84/500 (16%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++R L R R + ALEV D M+ KG P H + L+ R GF ++ +
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVI-LEAACRSGGFRNSVRVLEAMHAK 175
Query: 128 EKTYQTYGA--LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---CL------- 175
T T +LN Q D+A+ RK+ G ++YN ++ C+
Sbjct: 176 GCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDV 235
Query: 176 -------------------------YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+ G +E+V +VL +M PD Y I+
Sbjct: 236 EELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295
Query: 211 YGARSDLEGMEIILREMES---QPHIV-------------------------------LD 236
LE IL M S +P++V LD
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE-VLRLW 295
T+ F+ + L+D+ ++L++ D I Y +I+ + G E V+ L
Sbjct: 356 DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 415
Query: 296 DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
+ CK Y +L+ L G +AE+++ + G + N +I C
Sbjct: 416 SMSSCGCKPN-TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
GLV+ A +L+ ++ G + S++ V G AGKTE + L+V V KG P
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE----LLNVMVN-KGISP 529
Query: 416 DPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIR---NGKGVDEL 471
+ + +SI L EG V V + F T I + +Y+A I + + + +D
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID-F 588
Query: 472 LDSMKADGIDEDEETKEILV 491
M ++G +E T +L+
Sbjct: 589 FAYMVSNGCMPNESTYTMLI 608
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 191/500 (38%), Gaps = 84/500 (16%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++R L R R + ALEV D M+ KG P H + L+ R GF ++ +
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVI-LEAACRSGGFRNSVRVLEAMHAK 175
Query: 128 EKTYQTYGA--LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---CL------- 175
T T +LN Q D+A+ RK+ G ++YN ++ C+
Sbjct: 176 GCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDV 235
Query: 176 -------------------------YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+ G +E+V +VL +M PD Y I+
Sbjct: 236 EELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295
Query: 211 YGARSDLEGMEIILREMES---QPHIV-------------------------------LD 236
LE IL M S +P++V LD
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE-VLRLW 295
T+ F+ + L+D+ ++L++ D I Y +I+ + G E V+ L
Sbjct: 356 DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 415
Query: 296 DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
+ CK Y +L+ L G +AE+++ + G + N +I C
Sbjct: 416 SMSSCGCKPN-TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
GLV+ A +L+ ++ G + S++ V G AGKTE + L+V V KG P
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE----LLNVMVN-KGISP 529
Query: 416 DPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIR---NGKGVDEL 471
+ + +SI L EG V V + F T I + +Y+A I + + + +D
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID-F 588
Query: 472 LDSMKADGIDEDEETKEILV 491
M ++G +E T +L+
Sbjct: 589 FAYMVSNGCMPNESTYTMLI 608
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 158/364 (43%), Gaps = 11/364 (3%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY +++ + D A++ +MK+ I + TYN ++ K GQ+EKV +L+E
Sbjct: 204 RTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSE 263
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M NI P+ ++ I I+ +E + ++R M + + D TY++ Y
Sbjct: 264 MVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHM-IEKGVEPDIITYSAIMDGYCLRG 322
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+D+A V ++ + + Y+ LI+ Y N ++ ++L+ + Y
Sbjct: 323 QVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYS 382
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T+L L+++G +A+K+ E G + D + + ++ GY GLV+ A + L
Sbjct: 383 TILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERN 442
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
+ T + + VV G + + S+ G PD + +++ EG
Sbjct: 443 REDTNISFYTVVINGLCKNDRVREAHAIFEKLPSI-----GLIPDVRTYNVMITGFCREG 497
Query: 432 SVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGKGVDELLDSMK---ADGIDEDEETK 487
+V+ + + P N Y+ ++ R+ K + E++ MK G D T
Sbjct: 498 LFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNK-ISEIVSFMKEMAGRGFSFDATTT 556
Query: 488 EILV 491
+L+
Sbjct: 557 GVLI 560
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 137/366 (37%), Gaps = 56/366 (15%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYN----------------DIMCLYS 177
+ L + + +S FR+M+ +GI +S N ++ +Y
Sbjct: 65 FSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSVLPIYL 124
Query: 178 KTG----------------QYEKVPDVLTEMKA----KNIFPDNFSYRICINSYGARSDL 217
KTG KV D + K K P+ Y +N R
Sbjct: 125 KTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHT 184
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
E +LR ME Q + D TY+ K +D A ++L + +++ + YN
Sbjct: 185 EKTLSLLRIME-QGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNS 243
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRD-------YITMLEALMKLGEHEEAEKVL 330
LI LG W+ KT +N + + +++ L K G+ E+A++V+
Sbjct: 244 LIDGLCKLGQ-------WEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVM 296
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+ G D +A++ GYC G V A + L +KG S++++ GY
Sbjct: 297 RHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKK 356
Query: 391 GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMN 450
+ Q L + KG KPD ++IL L + G + D + + V P
Sbjct: 357 KNLAKAMQ-----LFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTP 411
Query: 451 RQMYHA 456
H+
Sbjct: 412 DICLHS 417
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 118/298 (39%), Gaps = 7/298 (2%)
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
D A+S F +M M S + ++ + Y V + EM+ I + I
Sbjct: 44 DDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIV 103
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK-AEER 266
NSY R ++ +L + + I + T+ + N + A + KK E+
Sbjct: 104 TNSYCLRHRIDCAFSVL-PIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+ + + + Y +++ + G+ + L L + + + R Y +++AL K + A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
+L E + + N++I G C G + + +L ++V ++++++ G
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
GK E + M+ + KG +PD ++I+ G V LR
Sbjct: 283 LCKEGKVEDADEVMRHMIE-----KGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLR 335
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 191/500 (38%), Gaps = 84/500 (16%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++R L R R + ALEV D M+ KG P H + L+ R GF ++ +
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVI-LEAACRSGGFRNSVRVLEAMHAK 175
Query: 128 EKTYQTYGA--LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---CL------- 175
T T +LN Q D+A+ RK+ G ++YN ++ C+
Sbjct: 176 GCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDV 235
Query: 176 -------------------------YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+ G +E+V +VL +M PD Y I+
Sbjct: 236 EELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295
Query: 211 YGARSDLEGMEIILREMES---QPHIV-------------------------------LD 236
LE IL M S +P++V LD
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE-VLRLW 295
T+ F+ + L+D+ ++L++ D I Y +I+ + G E V+ L
Sbjct: 356 DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 415
Query: 296 DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
+ CK Y +L+ L G +AE+++ + G + N +I C
Sbjct: 416 SMSSCGCKPN-TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
GLV+ A +L+ ++ G + S++ V G AGKTE + L+V V KG P
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE----LLNVMVN-KGISP 529
Query: 416 DPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIR---NGKGVDEL 471
+ + +SI L EG V V + F T I + +Y+A I + + + +D
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID-F 588
Query: 472 LDSMKADGIDEDEETKEILV 491
M ++G +E T +L+
Sbjct: 589 FAYMVSNGCMPNESTYTMLI 608
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/474 (22%), Positives = 196/474 (41%), Gaps = 45/474 (9%)
Query: 58 NKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH--AVQLDLIGRVHGFL 115
NK+ + + + ++ R + ++L + +M R+ C P +H + + L+GR
Sbjct: 101 NKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWC--KPNEHIYTIMISLLGREGLLD 158
Query: 116 SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
F + ++ +Y AL+N Y R + + +L +MK I+ S LTYN ++
Sbjct: 159 KCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVI 218
Query: 174 CLYSKTG-QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH 232
++ G +E + + EM+ + I PD +Y +++ R + E++ R M +
Sbjct: 219 NACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM-NDGG 277
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
IV D +TY+ + K ++K SD+L + D YN L+ YA G+ E +
Sbjct: 278 IVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAM 337
Query: 293 RLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
++ ++ C N Y +L + G +++ ++ E + S D N +I
Sbjct: 338 GVFHQMQAAGCTPNAN-TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEV 396
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG---FQCMKA------ 402
+ G + + D+VE+ ++ + G E Q M A
Sbjct: 397 FGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPS 456
Query: 403 ------------ALSVYVEG---------KGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
++Y E G P + S+L G V++ EA ++
Sbjct: 457 SKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILS 516
Query: 442 AL-RTVIPMNRQMYHAFIKANIRNGK---GVDELLDSMKADGIDEDEETKEILV 491
L + IP NR ++A I+A + GK V +D M+ D DE T E ++
Sbjct: 517 RLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVD-MEKSRCDPDERTLEAVL 569
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 173/442 (39%), Gaps = 62/442 (14%)
Query: 32 LYSI-ISPLGNPGT--RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM 88
+Y+I IS LG G + D G V +I + R+ +LE+ D M
Sbjct: 143 IYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM 202
Query: 89 NRKGI--------CVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNC 140
I V C LD G + F AE ++ D TY T L C
Sbjct: 203 KNDKISPSILTYNTVINACARG-GLDWEGLLGLF--AEMRHEGIQPDIVTYNTL--LSAC 257
Query: 141 YVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD 200
+R D+A FR M + GI TY+ ++ + K + EKV D+L+EM + PD
Sbjct: 258 AIRG-LGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPD 316
Query: 201 NFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVL 260
SY + + +Y ++ + +M++ + +TY+ + + ++ D +
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQA-AGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW----------DLEKT-----ACKR- 304
+ + D YN LI ++ G EV+ L+ D+E AC +
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 305 -----------YI--------NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
Y+ ++ Y ++EA + +EEA G++
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETY 495
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
++++ + GLV+ +EAIL LV+ G +++ Y GK E A+
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEE-------AVK 548
Query: 406 VYV--EGKGWKPDPKVITSILS 425
YV E PD + + ++LS
Sbjct: 549 TYVDMEKSRCDPDERTLEAVLS 570
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 118/301 (39%), Gaps = 45/301 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y LL Y + +A+ F +M+ G + TY+ ++ L+ ++G+Y+ V + EM
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY------------ 240
K+ N PD +Y I I +G + + + +M + +I D TY
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM-VEENIEPDMETYEGIIFACGKGGL 437
Query: 241 ---ASAAHFYIKANLIDKASDVLKKAEERLEQK-------------DGIGYNFLISLYAS 284
A Y+ AN I +S E Q +G N I Y S
Sbjct: 438 HEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHS 497
Query: 285 L---------GNKSEVLRLWDLEKTACKRYINRD-YITMLEALMKLGEHEEAEKVLKEWE 334
L +SE + L L + R NRD + +EA + G+ EEA K + E
Sbjct: 498 LLYSFARGGLVKESEAI-LSRLVDSGIPR--NRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
S D R AV+ Y LV E++ + + ++ A Y GKTE
Sbjct: 555 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVY---GKTE 611
Query: 395 R 395
R
Sbjct: 612 R 612
>gi|302809819|ref|XP_002986602.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
gi|300145785|gb|EFJ12459.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
Length = 445
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 138/308 (44%), Gaps = 18/308 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY A+ + D+A M+ G AL+ +T+N ++ K+G+ ++ V+ M
Sbjct: 120 TYNAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETM 179
Query: 193 KAKNIFPDNFSYRICINSYGARSDLE---GMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+NI P+ + + ++++ + E GM I+ EM P IV T+ + +
Sbjct: 180 LLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIV----TFNALLELFCN 235
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-- 307
+ +D A+ +L+ + + + Y+ ++ +A +G E R + + C N
Sbjct: 236 TDQMDSAAKLLETMAHSKCKPNFVTYSIMVQKFAEMGRMVEA-RAFLEQLVVCGYAPNLL 294
Query: 308 --RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y+ L K GE + A + L G +T N+++ G+C G + AE +L
Sbjct: 295 VCNAYVA---GLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVL 351
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
E+++ +G +++V+ G AG+ E F M L V + +PDP ++
Sbjct: 352 EEMIAEGSLPDSTTYSVLIQGLCSAGQIEHAFMVM---LQVTRAVESARPDPATFVKLIE 408
Query: 426 KLGDEGSV 433
KL + G +
Sbjct: 409 KLCELGEM 416
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 101/264 (38%), Gaps = 44/264 (16%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
L++ E T +L+ + + + ++AL M EMG + +T+N ++ L+ T Q +
Sbjct: 181 LRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMD 240
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+L M P+ +Y I + + + L ++ +V ++
Sbjct: 241 SAAKLLETMAHSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQL-----VVCGYAPNLLV 295
Query: 244 AHFYI----KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
+ Y+ K +D AS L E + + YN L+
Sbjct: 296 CNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLV-------------------- 335
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
E KLG +EAE+VL+E G+ D+ + +I G C+ G ++
Sbjct: 336 ---------------EGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSAGQIE 380
Query: 360 NAEAILEDLVEKGKATTPNSWAVV 383
+A ++ + ++ P+ V
Sbjct: 381 HAFMVMLQVTRAVESARPDPATFV 404
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 191/500 (38%), Gaps = 84/500 (16%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++R L R R + ALEV D M+ KG P H + L+ R GF ++ +
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVI-LEAACRSGGFRNSVRVLEAMHAK 175
Query: 128 EKTYQTYGA--LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---CL------- 175
T T +LN Q D+A+ RK+ G ++YN ++ C+
Sbjct: 176 GCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDV 235
Query: 176 -------------------------YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+ G +E+V +VL +M PD Y I+
Sbjct: 236 EELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295
Query: 211 YGARSDLEGMEIILREMES---QPHIV-------------------------------LD 236
LE IL M S +P++V LD
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE-VLRLW 295
T+ F+ + L+D+ ++L++ D I Y +I+ + G E V+ L
Sbjct: 356 DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 415
Query: 296 DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
+ CK Y +L+ L G +AE+++ + G + N +I C
Sbjct: 416 SMSSCGCKPN-TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
GLV+ A +L+ ++ G + S++ V G AGKTE + L+V V KG P
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE----LLNVMVN-KGISP 529
Query: 416 DPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIR---NGKGVDEL 471
+ + +SI L EG V V + F T I + +Y+A I + + + +D
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID-F 588
Query: 472 LDSMKADGIDEDEETKEILV 491
M ++G +E T +L+
Sbjct: 589 FAYMVSNGCMPNESTYTMLI 608
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 157/341 (46%), Gaps = 7/341 (2%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
Q Y L+N + ++ A F ++++ G+ +T+++N ++ K+ ++ +
Sbjct: 224 QYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKT 283
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ I+PD F+Y + I+ L+ E + EM+ Q + + T+ + ++
Sbjct: 284 MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQ-QRGLRPNGITFTALIDGQCRSR 342
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
ID A + + + D + YN L++ +G+ ++ +L D + + Y
Sbjct: 343 RIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYT 402
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T+++ K G+ E A ++ K G D A+I G+C +G V++AE L ++VE
Sbjct: 403 TLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEA 462
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G ++ +V GY G + GF+ +K ++ G KP +++ L +G
Sbjct: 463 GMKPDDATYTMVIDGYCKKGNVKMGFKLLKE-----MQINGHKPGVITYNVLMNGLCKQG 517
Query: 432 SVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVDEL 471
+++ + A+ + + + Y+ ++ + +NGK D L
Sbjct: 518 QMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 558
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 6/295 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ + + K L F +M+ G + +TYN ++ Y K G+ ++ +L M
Sbjct: 12 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 71
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+K + P+ SY + IN ++ IL EM + D TY + + Y K
Sbjct: 72 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK-GFTPDEVTYNTLLNGYCKEGN 130
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+A + + + Y LI+ N + + +D + R R Y T
Sbjct: 131 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 190
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ + G EA ++L E SG S NA I G+C ++ A +++++VEKG
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
A S++ + +G+ G+ +R FQ MK + VE KG PD +S++ L
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQ-MKQEM---VE-KGVSPDAVTYSSLIQGL 300
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 175/415 (42%), Gaps = 35/415 (8%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFS-----NLKDDE 128
K F QAL + M R G+ + + ++ + + A +F L+ +E
Sbjct: 127 KEGNFHQALVIHAEMVRNGVSP-SVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
+TY T L++ + RQ ++A +M E G + S +TYN + + + E+ V
Sbjct: 186 RTYTT---LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGV 242
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
+ EM K + PD SY I+ + + +L+ + +EM + + D TY+S
Sbjct: 243 VQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM-VEKGVSPDAVTYSSLIQGLC 301
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYI 306
+ + +A D+ ++ + D Y LI+ Y G+ ++ L L D + K +
Sbjct: 302 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 361
Query: 307 NRDYITMLEALMKLGEHEEAEKVL-----KEWELSGNSYDTRIPN----------AVIIG 351
Y ++ L K EA+++L +E S +YDT I N A+I G
Sbjct: 362 T--YSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKG 419
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
+C GL+ A+ + E +VE+ + V+ G+ G + F K +
Sbjct: 420 FCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH-----S 474
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAFVA-ALRTVIPMNRQMYHAFIKANIRNG 465
G+ P + +++ L EG +++ + LR+ ++ ++ N + G
Sbjct: 475 GFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEG 529
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 152/370 (41%), Gaps = 50/370 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ Y + ++TD+A R M G+ + +T+N I+ + G+ ++ +VL EM
Sbjct: 20 TYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEM 79
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
K PD +Y +N Y + ++ EM P++V TY S + K
Sbjct: 80 SRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV----TYTSLINSMCK 135
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A +++A + + R G+ N R
Sbjct: 136 AGNLNRAMEFFDQMHVR-----GLCPN------------------------------ERT 160
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T++ + G +EA +VL E SG NA+I G+C G ++ A +L+D+V
Sbjct: 161 YTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMV 220
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
KG S++ + +G+ + +R FQ + V + GK PD +S++ L +
Sbjct: 221 GKGVLPDVVSYSTIISGFARNQELDRAFQ-----MKVEMIGKSVLPDAVTYSSLIQGLCE 275
Query: 430 EGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEET 486
+ + + + F L +P + Y I A + G L D M G D T
Sbjct: 276 QRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVT 335
Query: 487 KEILVCTMEK 496
+L+ + K
Sbjct: 336 YNVLINGLNK 345
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 180/448 (40%), Gaps = 62/448 (13%)
Query: 53 WVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVH 112
V+NG V +I + K ++A+E D M+ +G+C
Sbjct: 114 MVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLC------------------ 155
Query: 113 GFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI 172
+E+TY T ++N + +Q D+A +M G S +TYN +
Sbjct: 156 -------------PNERTYTT---IINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNAL 199
Query: 173 MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH 232
+ + G+ E+ +L +M K + PD SY I+ + +L+ + EM +
Sbjct: 200 INGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKS- 258
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
++ D TY+S + + +A D+ ++ D Y LI+ Y G+ ++ L
Sbjct: 259 VLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKAL 318
Query: 293 RLWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL-----SGNSYDTRIP 345
L D ++K + Y ++ L K +EA ++L + S +Y+T I
Sbjct: 319 HLHDEMIQKGFLPDAVT--YNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIE 376
Query: 346 N----------AVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
N A++ G+C GL+ A+ + E ++ K + V+ G+ G +
Sbjct: 377 NCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLK 436
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA-ALRTVIPMNRQMY 454
++ K + V + P + +++ L EG ++ + LR+ + ++
Sbjct: 437 AYKLYKEMVHV-----DFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELS 491
Query: 455 HAFIKANIRNGK--GVDELLDSMKADGI 480
++ N + G V LL M DG+
Sbjct: 492 KVLVEINQKEGNMDMVFNLLTEMAKDGL 519
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 65/342 (19%), Positives = 129/342 (37%), Gaps = 32/342 (9%)
Query: 113 GFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI 172
GFL + LK E T+ ++N R + + +M G +TYN +
Sbjct: 39 GFLRS----MGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTL 94
Query: 173 MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME--SQ 230
+ Y K G + + + EM + P+ +Y INS +L R ME Q
Sbjct: 95 VNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLN------RAMEFFDQ 148
Query: 231 PHI---VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN 287
H+ + TY + + + + L+D+A VL + + YN LI+ + LG
Sbjct: 149 MHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGR 208
Query: 288 KSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK-EWELSGNSYDTRIPN 346
E + L + + + D ++ + ++E ++ + + E+ G S +P+
Sbjct: 209 MEEAIGLL---QDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSV---LPD 262
Query: 347 AV-----IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
AV I G C + A + ++++ ++ + Y G +
Sbjct: 263 AVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHD 322
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
+ KG+ PD +++ L + ++ + L
Sbjct: 323 EMIQ-----KGFLPDAVTYNVLINGLNKQARSKEARRLLLKL 359
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 171/405 (42%), Gaps = 58/405 (14%)
Query: 69 IRDLRKRKRFSQALEVSDWMNRKGICVFAP---CDHAVQLDLIGRVHGFLSAESYFSNLK 125
+ +LR+ + + + + +W+ + +F P C + + +D G+ + AE F +K
Sbjct: 54 VAELRRLRNWRSVILILEWILQG--TMFKPDVGCFNML-IDAYGKSKQWREAEKTFHLMK 110
Query: 126 DDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL---------TYNDIMC 174
D + T ++ LL Y R Q +KA F +MKE + T+ TYN +
Sbjct: 111 DFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLE 170
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR------SDL----------- 217
+ K+G+ + D +M+ + I P ++ I IN YG DL
Sbjct: 171 VLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPP 230
Query: 218 --------------EG----MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
EG E I E++S I D TY + Y + A +V
Sbjct: 231 NLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIP-DVYTYNALLEAYSRGEHPTGAKEV 289
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
+ E + D + YN LI + G ++ ++D K A + + ++ +L + K
Sbjct: 290 FQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAK 349
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
G+ EAE++++E E SG DT + N+++ Y N+G + E++LE +V ++
Sbjct: 350 AGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDIST 409
Query: 380 WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+ Y G E+ + + +E KG PD TS++
Sbjct: 410 LNTLINAYAQGGYIEKAEEVFNS-----LESKGLTPDVMSWTSLM 449
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y L++ + R T A + + MKE G + ++ ++ Y+K G+ + ++ E+
Sbjct: 304 SYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREI 363
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ + PD F + +++YG ++ ME +L M S +P I ST + + Y +
Sbjct: 364 ENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDI----STLNTLINAYAQ 419
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
I+KA +V E + D + + L+ YA
Sbjct: 420 GGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYA 453
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 184/452 (40%), Gaps = 57/452 (12%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
D +K+ V RI+R LR + S+A+EV M GI
Sbjct: 187 FDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGI---------------- 230
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+ T TY LL+ Y + + + L +M+ G A + +TY
Sbjct: 231 ------------------KPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTY 272
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ SK G++E+ ++ EM + ++Y I Y + ++ +
Sbjct: 273 NVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKG------MLAEALSL 326
Query: 230 QPHIVLDWS--TYASAAHFYIKANLIDKASDVLKKAEERLEQK---DGIGYNFLISLYAS 284
Q +VL + T A+ F + + SD +++ + L D + YN LI Y
Sbjct: 327 QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCR 386
Query: 285 LGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
LGN + L+D ++ Y T+L+ L + GE E A+++ E G + D
Sbjct: 387 LGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVT 446
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
++ G C G + A+ ++++ +G ++A G G T R F + L
Sbjct: 447 YTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEML 506
Query: 405 SVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANI 462
+ KG+ PD + ++ L G++++ + + + VIP + Y + I A++
Sbjct: 507 A-----KGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIP-DYVTYTSIIHAHL 560
Query: 463 RNG---KGVDELLDSMKADGIDEDEETKEILV 491
NG KG E+ M + G+ T +L+
Sbjct: 561 ENGRLRKG-REIFYEMLSKGLTPSVVTYTVLI 591
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 100/470 (21%), Positives = 185/470 (39%), Gaps = 42/470 (8%)
Query: 50 LDNWVKNGNKVRVG-----ELQR------------IIRDLRKRKRFSQALEVSDWMNRKG 92
LD++ K G KV+ G E+QR +I L K+ F QA + M + G
Sbjct: 241 LDSYCKGG-KVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 299
Query: 93 ICVFAPCDHAVQLDLIGRVHGFLSAESYFSN----LKDDEKTYQTYGALLNCYVRQRQTD 148
+ V A + + G + + AE+ LK T TY + + + +
Sbjct: 300 LKVSA---YTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMS 356
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
A+ M + ++YN ++ Y + G K + E+++ +FP +Y +
Sbjct: 357 DAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLL 416
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
+ + +LE + + EM ++ I D TY + K + A + +
Sbjct: 417 DGLCRQGELEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEE 325
+ D Y I LG+ S R + L++ + D I +++ L KLG EE
Sbjct: 476 ELDSYAYATRIVGELKLGDTS---RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEE 532
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
A ++L++ G D ++I + NG ++ I +++ KG + ++ V+
Sbjct: 533 ASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIH 592
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-- 443
G+ G+ ER F ++ KG P+ S+++ L + F A +
Sbjct: 593 GHAGKGRLERAFIYFSE-----MQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVE 647
Query: 444 RTVIPMNRQMYHAFI--KANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
+ + P N+ Y I N+ N + L M G+ D T L+
Sbjct: 648 KGIFP-NKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 167/410 (40%), Gaps = 23/410 (5%)
Query: 73 RKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG---RVHGFLSAESYFSNL--KDD 127
K RF + NR + VF P +V L+G R+ + +A S F+ L K
Sbjct: 28 HKNCRFRNVDDAVTCFNRM-VRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGI 86
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+ T+ L+NCY Q T A S + + G + +T+N I+ + G K D
Sbjct: 87 SPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALD 146
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAA 244
+ A+ D F+Y IN ++ +L+EME QP++V+ Y++
Sbjct: 147 FCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVM----YSALI 202
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K + A + + ER D + YN LI S+G EV +L L K +
Sbjct: 203 DGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQL--LTKMVREN 260
Query: 305 YINRDYI--TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
DY +++AL K G EA+ VL G D NA++ GYC+ V A
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAR 320
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
+ +V++G ++ V+ GY + K + K P S
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN-----KNLVPTIASYNS 375
Query: 423 ILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGKGVDEL 471
++ L + G + V+ + + + P + Y+ I A + G+ ++ L
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 157/374 (41%), Gaps = 35/374 (9%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y AL++ + AL ++ E GI L +TYN ++ G++++V +LT+M
Sbjct: 198 YSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257
Query: 194 AKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+N+ PD++++ I I++ G + +G+ ++ + +P IV TY + Y
Sbjct: 258 RENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV----TYNALMEGYCSR 313
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN--- 307
+ +A ++ + +R + D + YN LI Y E + L+ K C + +
Sbjct: 314 ENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF---KELCNKNLVPTI 370
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y ++++ L G +K+L E S D N +I C G + A +L
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVM 430
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY------VEGKGWKPDPKVIT 421
+++KG ++ + GY C++ ++V + G +PD
Sbjct: 431 MMKKGVKPNIVTYNAMMDGY-----------CLRNNVNVAKDIFNRMVKSGLEPDILNYN 479
Query: 422 SILSKLGDEGSVQDVEAFVAALR--TVIPMNRQMYHAFIK--ANIRNGKGVDELLDSMKA 477
+++ V + +R +IP + Y++ I N+ V ELLD M
Sbjct: 480 VLINGYCKTEMVDEAIVLFKEMRHKNLIP-DIASYNSLIDGLCNLGRIPHVQELLDEMCD 538
Query: 478 DGIDEDEETKEILV 491
G D T IL+
Sbjct: 539 SGQSPDVITYNILL 552
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/266 (18%), Positives = 108/266 (40%), Gaps = 6/266 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ ++ + +AL M + G+ + +TYN +M Y D+ M
Sbjct: 407 TYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM 466
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD +Y + IN Y ++ ++ +EM + +++ D ++Y S
Sbjct: 467 VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK-NLIPDIASYNSLIDGLCNLGR 525
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
I ++L + + + D I YN L+ + + + L+ +E Y N
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNH-- 583
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+++ L K + + AE LK + G S + + +I C +G A +L + +
Sbjct: 584 -AIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMED 642
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERG 396
+ ++ ++ +T++
Sbjct: 643 NDRPPDAITFEIIIGVLLQRNETDKA 668
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 32/255 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY A+++ Y + + A F +M + G+ L YN ++ Y KT ++ + EM
Sbjct: 442 TYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+ KN+ PD SY I+ + ++ +L EM P ++ TY + K
Sbjct: 502 RHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVI----TYNILLDAFCK 557
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN--KSEVLRLWD-----LEKTAC 302
DKA + ++ E GI +F + +A + N K E L++ + L C
Sbjct: 558 TQPFDKAISLFRQIVE------GIWPDFYTN-HAIVDNLCKGEKLKMAEDALKHLLMHGC 610
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ--- 359
+ + Y ++ AL K G EA +L + E + R P+A+ L+Q
Sbjct: 611 SPNV-QTYTILINALCKDGSFGEAMLLLSKME-----DNDRPPDAITFEIIIGVLLQRNE 664
Query: 360 --NAEAILEDLVEKG 372
AE + E+++ +G
Sbjct: 665 TDKAEKLREEMIARG 679
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 195/474 (41%), Gaps = 45/474 (9%)
Query: 58 NKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH--AVQLDLIGRVHGFL 115
NK+ + + + ++ R + ++L + +M R+ C P +H + + L+GR
Sbjct: 101 NKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWC--KPNEHIYTIMISLLGREGLLD 158
Query: 116 SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
F + ++ +Y AL+N Y R + + +L +MK I+ S LTYN ++
Sbjct: 159 KCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVI 218
Query: 174 CLYSKTG-QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH 232
++ G +E + + EM+ + I PD +Y +++ R + E++ R M +
Sbjct: 219 NACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM-NDGG 277
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
IV D +TY+ + K ++K D+L + D YN L+ YA G+ E +
Sbjct: 278 IVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAM 337
Query: 293 RLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
++ ++ C N Y +L + G +++ ++ E + S D N +I
Sbjct: 338 GVFHQMQAAGCTPNAN-TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEV 396
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG---FQCMKA------ 402
+ G + + D+VE+ ++ + G E Q M A
Sbjct: 397 FGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPS 456
Query: 403 ------------ALSVYVEG---------KGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
++Y E G P + S+L G V++ EA ++
Sbjct: 457 SKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILS 516
Query: 442 AL-RTVIPMNRQMYHAFIKANIRNGK---GVDELLDSMKADGIDEDEETKEILV 491
L + IP NR ++A I+A + GK V +D M+ D DE T E ++
Sbjct: 517 RLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVD-MEKSRCDPDERTLEAVL 569
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 173/442 (39%), Gaps = 62/442 (14%)
Query: 32 LYSI-ISPLGNPGT--RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM 88
+Y+I IS LG G + D G V +I + R+ +LE+ D M
Sbjct: 143 IYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM 202
Query: 89 NRKGI--------CVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNC 140
+ I V C LD G + F AE ++ D TY T L C
Sbjct: 203 KNEKISPSILTYNTVINACARG-GLDWEGLLGLF--AEMRHEGIQPDIVTYNTL--LSAC 257
Query: 141 YVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD 200
+R D+A FR M + GI TY+ ++ + K + EKV D+L EM + PD
Sbjct: 258 AIRG-LGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 201 NFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVL 260
SY + + +Y ++ + +M++ + +TY+ + + ++ D +
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQA-AGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW----------DLEK-----TACKR- 304
+ + D YN LI ++ G EV+ L+ D+E AC +
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 305 -----------YI--------NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
Y+ ++ Y ++EA + +EEA G++
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
++++ + GLV+ +EAIL LV+ G +++ Y GK E A+
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEE-------AVK 548
Query: 406 VYV--EGKGWKPDPKVITSILS 425
YV E PD + + ++LS
Sbjct: 549 TYVDMEKSRCDPDERTLEAVLS 570
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 118/301 (39%), Gaps = 45/301 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y LL Y + +A+ F +M+ G + TY+ ++ L+ ++G+Y+ V + EM
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY------------ 240
K+ N PD +Y I I +G + + + +M + +I D TY
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM-VEENIEPDMETYEGIIFACGKGGL 437
Query: 241 ---ASAAHFYIKANLIDKASDVLKKAEERLEQK-------------DGIGYNFLISLYAS 284
A Y+ AN I +S E Q +G N I + S
Sbjct: 438 HEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHS 497
Query: 285 L---------GNKSEVLRLWDLEKTACKRYINRD-YITMLEALMKLGEHEEAEKVLKEWE 334
L +SE + L L + R NRD + +EA + G+ EEA K + E
Sbjct: 498 LLYSFARGGLVKESEAI-LSRLVDSGIPR--NRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
S D R AV+ Y LV E++ + + ++ A Y GKTE
Sbjct: 555 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVY---GKTE 611
Query: 395 R 395
R
Sbjct: 612 R 612
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 177/406 (43%), Gaps = 15/406 (3%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA-VQLDLIGRVHGFLSAESYFSNLKD 126
++R+L R + +AL+ +WM ++G A + + +GR+ A F+ +
Sbjct: 168 LLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQK 227
Query: 127 DE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG-QYE 183
Y A+++ Y R + +AL F+ MK+ G + +TYN I+ K G +
Sbjct: 228 AGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLK 287
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
K D+ EM+ + + PD ++ I S E + + EM+ + I D TY +
Sbjct: 288 KALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRG-IEQDIFTYNTL 346
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
K ++ A+ ++ + + + Y+ +I Y LG E + L+ K +
Sbjct: 347 IDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGV 406
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
R Y T+++ KLG ++A K+ E G D NA+I Y G ++A
Sbjct: 407 RPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAG 466
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKPDPKVIT 421
+ + + +G +++ + Y AG + A S++VE K G KPD + +
Sbjct: 467 LFDKMKAEGLVPNVLTYSALIDAYSKAGMHQD-------ATSIFVEFKRAGLKPDVVLYS 519
Query: 422 SILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGK 466
S++ G V+D + + + I N Y++ I A RNG+
Sbjct: 520 SLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQ 565
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 9/196 (4%)
Query: 101 HAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
++ +D G++ F A + ++K+ +Y L++ Y + + D AL+ + M+
Sbjct: 378 YSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDME 437
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY---GARS 215
+G+ +TYN ++ Y K G+Y+ + +MKA+ + P+ +Y I++Y G
Sbjct: 438 RVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQ 497
Query: 216 DLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
D + + + +P +VL Y+S K L++ A +L++ + Q + + Y
Sbjct: 498 DATSIFVEFKRAGLKPDVVL----YSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTY 553
Query: 276 NFLISLYASLGNKSEV 291
N LI Y G V
Sbjct: 554 NSLIDAYGRNGQVDNV 569
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 132/352 (37%), Gaps = 44/352 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +L+ R + + F +M+ GI TYN ++ K GQ E +++ M
Sbjct: 307 TFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSM 366
Query: 193 KAKNIFPDNFSYRICINSYGARSDLE---GMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ KNI P+ +Y I+ YG E G+ ++E +P D +Y + Y K
Sbjct: 367 RLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRP----DRVSYNTLIDIYAK 422
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
D A K E + D + YN LI Y G + L+D K
Sbjct: 423 LGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLT 482
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI------------------------- 344
Y +++A K G H++A + E++ +G D +
Sbjct: 483 YSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMT 542
Query: 345 -----PNAV-----IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
PN V I Y NG V N EA ++ + + + +
Sbjct: 543 QAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNA 602
Query: 395 RGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
+ AA+SV+ E + G KP+ ++IL+ S+Q+ + +R
Sbjct: 603 NDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQMR 654
>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Brachypodium distachyon]
Length = 795
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 187/439 (42%), Gaps = 32/439 (7%)
Query: 61 RVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY 120
+VGE +++ RK +RF + L +S + +C + I FL
Sbjct: 217 KVGEALSFLQEARKGERF-KPLGMSFNVLMSALCNWG---------FIQPAKSFLCLMLK 266
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+ L D TY T L++ + D+A+ F ++ E G+ L T+TYN ++ Y G
Sbjct: 267 Y-GLNPDRYTYST---LIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLG 322
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWST 239
+VP ++ M+ + I PD +Y I I + D+ EGM+I R + L+ T
Sbjct: 323 LTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKI--RNDILDQGLQLNIVT 380
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
Y+ + K L+ +A ++L + D I Y+ LI Y LG L + D+
Sbjct: 381 YSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDV-- 438
Query: 300 TACKRYI---NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
C + + + +++++L L K G EA L+ + D + N VI GY G
Sbjct: 439 MCCSQKVVPTSLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIG 498
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
+ NA + + +V G T + + GY G + +A ++ P
Sbjct: 499 DISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRA-----IQISSLLPT 553
Query: 417 PKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVDEL--L 472
T+++ L + G V + + + + + + P N Y IK + + D + L
Sbjct: 554 MVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKP-NAITYSVVIKGLCKELRFHDAIHFL 612
Query: 473 DSMKADGIDEDEETKEILV 491
D+M +G++ D T L+
Sbjct: 613 DNMHGEGVNADPVTYNTLI 631
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 115/298 (38%), Gaps = 38/298 (12%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
AL N Y R + AL KM + + +S TY+ ++ T + ++ EM+A
Sbjct: 140 ALANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLLYGLRMT---DMALELFEEMEAY 196
Query: 196 NIFPDNFSYRICINSY------------------GARSDLEGMEI-----------ILRE 226
I +S+ I I+ G R GM ++
Sbjct: 197 GISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSALCNWGFIQP 256
Query: 227 MESQPHIVLDWS------TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
+S ++L + TY++ H K +D+A D+ ++ E + + + YN LI+
Sbjct: 257 AKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLIN 316
Query: 281 LYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
Y LG EV ++ + Y ++ + G+ EE K+ + G
Sbjct: 317 GYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQL 376
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ + ++ GLV AE +L ++ G +++++ GY G+ ER +
Sbjct: 377 NIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALE 434
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 124/342 (36%), Gaps = 60/342 (17%)
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
+ YN ++ Y+K G + ++ +FP + + Y DL+ E R
Sbjct: 484 VVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFR 543
Query: 226 EMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
++ ++ TY + +A ++ +L + E+ + + I Y+ +I
Sbjct: 544 AIQIS-SLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVI------ 596
Query: 286 GNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
K CK D I L+ + H E G + D
Sbjct: 597 -------------KGLCKELRFHDAIHFLDNM-----HGE-----------GVNADPVTY 627
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW-----------AVVAAGYFDAGKTE 394
N +I G+C +Q A I + +V G TP ++ V+ A Y E
Sbjct: 628 NTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEYLLESLRE 687
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMY 454
RG + K A + ++ + K P S+ KL D+G V+ F AA+ NR
Sbjct: 688 RGIELRKFAYTTLIKAECAKGMPYEAISLFGKLLDDGFETTVKDFSAAI------NRLCK 741
Query: 455 HAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCTMEK 496
F K + + M + G+ D + +LV ++K
Sbjct: 742 RKFAKEAVM-------FIPFMLSAGVFPDTQVYYVLVRALQK 776
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 171/396 (43%), Gaps = 25/396 (6%)
Query: 49 ELDNWVK-NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDL 107
E+ +W++ N K+ + +I L K +R +ALE+ + + +KG+ + ++
Sbjct: 152 EMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGL----------EANV 201
Query: 108 IGRVHGFLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
+ F AE F + K + TY L++ + R+ + D A+ KM + I +
Sbjct: 202 VTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFT 261
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
YN ++ Y K G EM K + P +Y I+ Y + +
Sbjct: 262 VYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYN 321
Query: 226 EMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
EM ++ I + T+ + +AN++ +A + + +ER + YN +I +
Sbjct: 322 EMTAKG-ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRS 380
Query: 286 GNKSEVLRLWDLEKTACKRYINRDYI--TMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
GN SE L L++ K ++ Y ++ L +G EA++ + + + +
Sbjct: 381 GNISEAFHL--LDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNM 438
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAA 403
+A++ GYC G ++A + +VE+G A +A++ G T F +K
Sbjct: 439 CYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKE- 497
Query: 404 LSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
+ G +PD + T+++ + G+++ EAF
Sbjct: 498 ----MHNHGLRPDAVIYTNMIDRHSKAGNLK--EAF 527
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 132/342 (38%), Gaps = 55/342 (16%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y L++ + R+ +AL + + G+ + +TY G++ + + EM
Sbjct: 168 VYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY---------YGKFNEAELLFKEM 218
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + ++ +Y I I+S+ R +++ L +M ++++ Y
Sbjct: 219 GEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKAS---IEFTVYP----------- 264
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
YN LI+ Y LGN S +D ++K + Y
Sbjct: 265 ----------------------YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVT--Y 300
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+++ GE +A KV E G S +T A+I G C ++ A + ++ E
Sbjct: 301 TSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKE 360
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+ + ++ V+ G+ +G F + + GKG+ PD ++S L
Sbjct: 361 RKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMV-----GKGFVPDTYTYRPLISGLCSV 415
Query: 431 GSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGKGVDEL 471
G V + + FV L + +N Y A + + G+ D +
Sbjct: 416 GRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAV 457
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 149/348 (42%), Gaps = 24/348 (6%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
+L+ R MK+ + T + ++ + ++ V + ++ + N+ PD + Y +
Sbjct: 80 SLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVR 139
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
S D + ++ ME L Y H K+ I +A ++ + L Q
Sbjct: 140 SLCELKDFNKAKEMIHWMEFN-QCKLSIVVYNVLIHGLCKSRRIWEALEI----KNCLMQ 194
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
K G+ N +++ Y N++E+L EK C +I Y ++++ + GE + A
Sbjct: 195 K-GLEAN-VVTYYGKF-NEAELLFKEMGEKGLCANHIT--YSILIDSFCRRGEMDNAIGF 249
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
L + + + N++I GYC G A+ +++++KG T ++ + +GY +
Sbjct: 250 LDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCN 309
Query: 390 AGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RT 445
G+ + F+ VY E KG P+ T+I+S L + + + R
Sbjct: 310 EGEWHKAFK-------VYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERK 362
Query: 446 VIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
++P + Y+ I+ + R+G + LLD M G D T L+
Sbjct: 363 IMP-SEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLI 409
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 139/332 (41%), Gaps = 25/332 (7%)
Query: 79 SQALEVSDWMNRKGICVFAPCDHAVQ-----LDLIGRVHGFLSAESYFSNLKDDEKTYQ- 132
S+A + D M KG F P + + L +GRV A+ + +L D
Sbjct: 384 SEAFHLLDEMVGKG---FVPDTYTYRPLISGLCSVGRVS---EAKEFVDDLHKDHHKLNN 437
Query: 133 -TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
Y AL++ Y ++ + A+S R M E G+A+ + Y ++ ++ + +L E
Sbjct: 438 MCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKE 497
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLE---GMEIILREMESQPHIVLDWSTYASAAHFYI 248
M + PD Y I+ + +L+ G+ I+ + P++V TY + +
Sbjct: 498 MHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVV----TYTALINGLC 553
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI-- 306
KA L+DKA + K+ + I Y + GN + ++L K ++
Sbjct: 554 KAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQL---HHAMLKGFLAT 610
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y ++ +LG+ EEA K+L + D + +I C +Q A +
Sbjct: 611 TVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWH 670
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+++KG +++ + G AG+ E+ F+
Sbjct: 671 TMLDKGLKPDTLAYSFLVHGCCIAGELEKAFE 702
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 115/298 (38%), Gaps = 39/298 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ A+++ R +A+ F +MKE I S +TYN ++ + ++G + +L EM
Sbjct: 334 TFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEM 393
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK--- 249
K PD ++YR I+ + + + + ++ H L+ Y++ H Y K
Sbjct: 394 VGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHH-KLNNMCYSALVHGYCKEGR 452
Query: 250 -----------------------ANLIDKAS---------DVLKKAEERLEQKDGIGYNF 277
A LID + +LK+ + D + Y
Sbjct: 453 FKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTN 512
Query: 278 LISLYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
+I ++ GN E LWD + C + Y ++ L K G ++AE + KE L
Sbjct: 513 MIDRHSKAGNLKEAFGLWDIMVDEGCLPNV-VTYTALINGLCKAGLMDKAELLSKE-TLV 570
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
+ I + + G L + KG T S+ ++ G+ GK E
Sbjct: 571 SDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIE 628
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 157/341 (46%), Gaps = 7/341 (2%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
Q Y L+N + ++ A F ++++ G+ +T+++N ++ K+ ++ +
Sbjct: 224 QYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKT 283
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ I+PD F+Y + I+ L+ E + EM+ Q + + T+ + ++
Sbjct: 284 MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQ-QRGLRPNGITFTALIDGQYRSR 342
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+D A + + + D + YN L++ +G+ ++ +L D K + Y
Sbjct: 343 RMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYT 402
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T+++ K G+ E A ++ K G D A+I G+C +G V++AE L ++VE
Sbjct: 403 TLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEA 462
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G ++ +V GY G + GF+ +K ++ G KP +++ L +G
Sbjct: 463 GMKPDDATYTMVIDGYCKKGNVKMGFKLLKE-----MQINGHKPGVITYNVLMNGLCKQG 517
Query: 432 SVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVDEL 471
+++ + A+ + + + Y+ ++ + +NGK D L
Sbjct: 518 QMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 558
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 167/410 (40%), Gaps = 23/410 (5%)
Query: 73 RKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG---RVHGFLSAESYFSNL--KDD 127
K RF + NR + VF P +V L+G R+ + +A S F+ L K
Sbjct: 28 HKNCRFRNVDDAVTCFNRM-VRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGI 86
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+ T+ L+NCY Q T A S + + G + +T+N I+ + G K D
Sbjct: 87 SPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALD 146
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAA 244
+ A+ D F+Y IN ++ +L+EME QP++V+ Y++
Sbjct: 147 FCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVM----YSALI 202
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K + A + + ER D + YN LI S+G EV +L L K +
Sbjct: 203 DGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQL--LTKMVREN 260
Query: 305 YINRDYI--TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
DY +++AL K G EA+ VL G D NA++ GYC+ V A
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAR 320
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
+ +V++G ++ V+ GY + K + K P S
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN-----KNLVPTIASYNS 375
Query: 423 ILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGKGVDEL 471
++ L + G + V+ + + + P + Y+ I A + G+ ++ L
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 157/374 (41%), Gaps = 35/374 (9%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y AL++ + AL ++ E GI L +TYN ++ G++++V +LT+M
Sbjct: 198 YSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257
Query: 194 AKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+N+ PD++++ I I++ G + +G+ ++ + +P IV TY + Y
Sbjct: 258 RENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV----TYNALMEGYCSR 313
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN--- 307
+ +A ++ + +R + D + YN LI Y E + L+ K C + +
Sbjct: 314 ENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF---KELCNKNLVPTI 370
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y ++++ L G +K+L E S D N +I C G + A +L
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVM 430
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE------GKGWKPDPKVIT 421
+++KG ++ + GY C++ ++V + G +PD
Sbjct: 431 MMKKGVKPNIVTYNAMMDGY-----------CLRNNVNVAKDIFNRMVKSGLEPDILNYN 479
Query: 422 SILSKLGDEGSVQDVEAFVAALR--TVIPMNRQMYHAFIK--ANIRNGKGVDELLDSMKA 477
+++ V + +R +IP + Y++ I N+ V ELLD M
Sbjct: 480 VLINGYCKTEMVDEAIVLFKEMRHKNLIP-DIASYNSLIDGLCNLGRIPHVQELLDEMCD 538
Query: 478 DGIDEDEETKEILV 491
G D T IL+
Sbjct: 539 SGQSPDVITYNILL 552
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/266 (18%), Positives = 108/266 (40%), Gaps = 6/266 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ ++ + +AL M + G+ + +TYN +M Y D+ M
Sbjct: 407 TYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM 466
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD +Y + IN Y ++ ++ +EM + +++ D ++Y S
Sbjct: 467 VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK-NLIPDIASYNSLIDGLCNLGR 525
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
I ++L + + + D I YN L+ + + + L+ +E Y N
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNH-- 583
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+++ L K + + AE LK + G S + + +I C +G A +L + +
Sbjct: 584 -AIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMED 642
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERG 396
+ ++ ++ +T++
Sbjct: 643 NDRPPDAITFEIIIGVLLQRNETDKA 668
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 117/281 (41%), Gaps = 35/281 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY A+++ Y + + A F +M + G+ L YN ++ Y KT ++ + EM
Sbjct: 442 TYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+ KN+ PD SY I+ + ++ +L EM P ++ TY + K
Sbjct: 502 RHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVI----TYNILLDAFCK 557
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN--KSEVLRLWD-----LEKTAC 302
DKA + ++ E GI +F + +A + N K E L++ + L C
Sbjct: 558 TQPFDKAISLFRQIVE------GIWPDFYTN-HAIVDNLCKGEKLKMAEDALKHLLMHGC 610
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ--- 359
+ + Y ++ AL K G EA +L + E + R P+A+ L+Q
Sbjct: 611 SPNV-QTYTILINALCKDGSFGEAMLLLSKME-----DNDRPPDAITFEIIIGVLLQRNE 664
Query: 360 --NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
AE + E+++ +G S +F A GFQ
Sbjct: 665 TDKAEKLREEMIARGLVNIEKSLNQSHNVFFPASS---GFQ 702
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 160/390 (41%), Gaps = 42/390 (10%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTY 131
K R + A ++ D M R G+ V A C +++ LD R ++++ E T
Sbjct: 155 KSGRVAHARQLLDEMPRHGVKVNALCYNSL-LDAYTREKDDDRVAEMLKVMENEGIEPTV 213
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TY L++ R K + F +MK ++ Y+ ++ Y + G + +V E
Sbjct: 214 GTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDE 273
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME----------------------- 228
I P+ +Y IN + +E E+++ +M+
Sbjct: 274 CVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNM 333
Query: 229 -----------SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
+ I LD TY + A +AN +D+A ++L+ E+ + + + Y
Sbjct: 334 VDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTT 393
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
LIS++ + G+ E RL+ Y M++ +K G EAE+ KE E G
Sbjct: 394 LISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKG 453
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
D A++ G+C NG V A + E++ ++G ++ + +G G++E F
Sbjct: 454 LVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAF 513
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKL 427
Q L G G PD + ++++ L
Sbjct: 514 QLYDNML-----GDGLTPDDALYSALVGSL 538
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 167/390 (42%), Gaps = 23/390 (5%)
Query: 114 FLSAESYFSNLK--DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
F +A+ +FS +K Y L+ Y ++ +A+ +F ++K+ G+ + TY
Sbjct: 75 FQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCA 134
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP 231
++ K G +K + L EM+ I PD +Y I I+ +G E RE++
Sbjct: 135 VLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSG 194
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
++ D Y + H + K ++D+A+ V K+A+ D + + +I +YA +
Sbjct: 195 YLP-DSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQA 253
Query: 292 LRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
L + L K + Y ++L A M+ + A K+ +E + S + ++
Sbjct: 254 LHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNV 313
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE---RGFQCMKAALSVYV 408
Y G AE +L + + G +++ + Y GK + R F MK
Sbjct: 314 YSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQ------ 367
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR--TVIPMNRQMYHAFIKANIRNGK 466
+G K + V ++L G G + D E +A L+ ++P + Y I A R G+
Sbjct: 368 --QGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVP-DTVTYTTLINAYNRLGR 424
Query: 467 GVD--ELLDSMKADGIDEDEETKEILVCTM 494
+ + + +ADG+ D ILV M
Sbjct: 425 FEECIRVFEQHRADGLKLD----RILVAIM 450
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 166/389 (42%), Gaps = 13/389 (3%)
Query: 109 GRVHGFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
G+ F A YFS LKD+ TY A+L+ + DK ++M+E GI
Sbjct: 105 GKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQ 164
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
+ Y+ ++ ++ K G++E E++ PD+ +Y I+++ ++ ++ +E
Sbjct: 165 VAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKE 224
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
+ + + D + + Y KA + D+A VLK +E Q + +GY +++ +
Sbjct: 225 AQ-RSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRAN 283
Query: 287 NKSEVLRLWD-LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
++L++ ++++ C R+ YITML K G H AE++L + G +
Sbjct: 284 QPMGAIKLFEEMQESNC-RFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAY 342
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
+ +I Y G +Q A + + ++G + + Y AG+ + M
Sbjct: 343 STLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAE--- 399
Query: 406 VYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIK--ANI 462
++ PD T++++ G ++ + F + ++R + I
Sbjct: 400 --LKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKA 457
Query: 463 RNGKGVDELLDSMKADGIDEDEETKEILV 491
R + ELL+ M GI D + +V
Sbjct: 458 RQYSKLAELLEVMPKSGIQPDTRILKTVV 486
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 107/239 (44%), Gaps = 1/239 (0%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
YG++LN ++R Q A+ F +M+E TY ++ +YSK G + ++L +M+
Sbjct: 272 YGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMR 331
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ +Y I+ YG L+ + M+ Q + Y + Y KA I
Sbjct: 332 QLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQ-GCKGNLIVYNTMLDMYGKAGRI 390
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
+ A ++ + ++ D + Y LI+ Y LG E +R+++ + + M
Sbjct: 391 NDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIM 450
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+ K ++ + ++L+ SG DTRI V+ Y + G+ +NA +L + E G
Sbjct: 451 INVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAELLRKINELG 509
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 116/280 (41%), Gaps = 12/280 (4%)
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
DD + T ++ Y + R D+AL + MKE+G+ + L Y ++ + + Q
Sbjct: 232 DDPVIFYT---MIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGA 288
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYAS 242
+ EM+ N +Y +N Y G S E + +R++ + ++V Y++
Sbjct: 289 IKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVV----AYST 344
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
Y K + +A+ + +++ + + I YN ++ +Y G ++ RL K +
Sbjct: 345 LIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSK 404
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG-YCNNGLVQNA 361
Y T++ A +LG EE +V ++ G D RI A++I Y
Sbjct: 405 LVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLD-RILVAIMINVYGKARQYSKL 463
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+LE + + G V Y D G E + ++
Sbjct: 464 AELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAELLR 503
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 1/194 (0%)
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
TG+++ ++MK PD Y I I YG R + +++ + ++ D
Sbjct: 72 TGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDE-GLLPDSG 130
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
TY + K IDK ++ LK+ E + D + Y+ LI ++ G + +
Sbjct: 131 TYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFREL 190
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
+ + + Y T++ A K+G ++A V KE + S D I +I Y +
Sbjct: 191 QMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMA 250
Query: 359 QNAEAILEDLVEKG 372
A +L+ + E G
Sbjct: 251 DQALHVLKLMKEIG 264
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Query: 105 LDLIGRVHGFLSAESYFSNLKDDEKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGI 162
LD+ G+ AE + LKD + T Y L+N Y R + ++ + F + + G+
Sbjct: 381 LDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGL 440
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
L + ++ +Y K QY K+ ++L M I PD + + Y E
Sbjct: 441 KLDRILVAIMINVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAE 500
Query: 223 ILREM 227
+LR++
Sbjct: 501 LLRKI 505
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 161/392 (41%), Gaps = 44/392 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ ++N R+ + KA M+ G+ + +TYN ++ Y G++E + M
Sbjct: 219 TFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTM 278
Query: 193 KAKNIFPDNFSY-----RIC------------------------------INSYGARSDL 217
K KN+ PD ++Y R+C I+ + DL
Sbjct: 279 KDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDL 338
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
+ EM ++ IV TY H I++A D++K+ E+ + D + YN
Sbjct: 339 DKAFAYRDEMMNR-GIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNI 397
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
I+ Y GN + L L+D R Y ++++ K EAE+ K+ G
Sbjct: 398 QINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG 457
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
D + NA+I G+C NG + A +L+++ ++ + GY K E
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAK 517
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHA 456
+ + ++ +G KPD +++S G ++D +E F L Y+A
Sbjct: 518 KLLDE-----MKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNA 572
Query: 457 FIKANIRNGKG--VDELLDSMKADGIDEDEET 486
I+ + G+ +ELL M++ GI D+ T
Sbjct: 573 LIQGYSKIGEADHAEELLREMQSKGITPDDST 604
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 2/229 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +N Y R KALS F +M E I + TY ++ ++ K + + + +
Sbjct: 394 TYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKS 453
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD + I+ + +++ +L+EM++ +V D T+ + Y +
Sbjct: 454 IKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNA-KVVPDEVTFNTLMQGYCRERK 512
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+++A +L + +ER + D I YN LIS Y+ G+ + L ++D + Y
Sbjct: 513 VEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNA 572
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY-CNNGLVQN 360
+++ K+GE + AE++L+E + G + D VI N+ LV+N
Sbjct: 573 LIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVEN 621
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 169/382 (44%), Gaps = 33/382 (8%)
Query: 28 NKTTLYSIISPLGNPGTRIEPEL---DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEV 84
N T +I++ GN G +++ L D KNG ++ L K+ RF+ LE+
Sbjct: 358 NTFTYNTIMTAYGNAG-KVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEM 416
Query: 85 SDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQ------TYGALL 138
M+R G C + V + + V G ESY + + + K+ + TY L+
Sbjct: 417 LGEMSRSG-CT----PNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLI 471
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
Y R A + +M G A TYN ++ + S+ G + ++++MK++
Sbjct: 472 CAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFK 531
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
P++ SY + + + + G+E I +E+ Q +I W + K ++
Sbjct: 532 PNDMSYSLLLQCHAKGGNAAGIEAIEKEV-YQGNIFPSWVILRTLVIANFKCRRLEGIER 590
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYIT---ML 314
++ + R + D + N ++S+YA G S+ + +++ +E+ ++ D IT ++
Sbjct: 591 AFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLG----LSPDLITYNSLM 646
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSY---------DTRIPNAVIIGYCNNGLVQNAEAIL 365
+ K E EAEK+L S + D N VI G+C GL++ A+ +L
Sbjct: 647 DMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVL 706
Query: 366 EDLVEKGKATTPNSWAVVAAGY 387
+++ G A ++ + GY
Sbjct: 707 SEMIADGVAPCVITYHTLVGGY 728
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 145/357 (40%), Gaps = 46/357 (12%)
Query: 57 GNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRV--- 111
G ++ V ++ L + R+ +AL + D + R+G+ AP + V LD+ GR+
Sbjct: 178 GARLDVRAYTTVLHALSREGRYERALRLFDELRREGV---APTRVTYNVVLDVYGRMGRS 234
Query: 112 ------------------HGFLS---------------AESYFSNLK--DDEKTYQTYGA 136
GF + A ++F +LK TY A
Sbjct: 235 WPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNA 294
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL + + +AL R+M++ G +TYN++ Y++ G Y++ + M K
Sbjct: 295 LLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKG 354
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ P+ F+Y + +YG ++ + M+ I +TY K +
Sbjct: 355 LLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYT-NTYNLVLGMLGKKSRFAAM 413
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YITMLE 315
++L + + + +N L+++ G +S V R+ + K+ CK + RD Y T++
Sbjct: 414 LEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKS-CKVELCRDTYNTLIC 472
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
A + G A K+ E +G + NA++ G A +I+ + +G
Sbjct: 473 AYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEG 529
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 132/296 (44%), Gaps = 9/296 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYGAL+ + R + + A+ F +M++ G+ + + + ++ + K G D+ +M
Sbjct: 257 TYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDM 316
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + + PD +Y +N +L+ E I+ EM++ + D TY + K
Sbjct: 317 RVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNA-GLKPDKVTYTTLIDGCCKDGK 375
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+D A D+ +K E+ D + Y LIS + G + R+ A N Y
Sbjct: 376 LDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTM 435
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++A + G+ + K+LKE + G N ++ G C G ++NA+ +L ++ G
Sbjct: 436 VIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIG 495
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
+ ++ ++ G GK + + KG PD V TS++S+L
Sbjct: 496 VSPDDITYNILLDGQCKHGKVANSEELESS--------KGMVPDFAVYTSLISELA 543
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/360 (19%), Positives = 149/360 (41%), Gaps = 26/360 (7%)
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
R T +A + + ++ + G+A T +N +M + + G+ V EM+ +++ P
Sbjct: 163 RLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVV 221
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
++ I+ DL+ ++ + +EM S + D TY + + + ++ A + +
Sbjct: 222 TFNTLISGMCRARDLDAVDGLYKEM-SDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNE 280
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMK 319
+ + + + LI + GN + + L+ + R + D Y ++ L +
Sbjct: 281 MRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRV---RGVMPDLVAYNALVNGLCR 337
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
+ AE +++E + +G D +I G C +G + A I + + EK + +
Sbjct: 338 ARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVT 397
Query: 380 WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
+ + +G AG+ + ++ + +E PD T ++ +G V+
Sbjct: 398 YTALISGLSKAGRPVDAERVLREMMEAALE-----PDNTTYTMVIDAFCRKGDVKTGFKL 452
Query: 440 VAALRTVIPMNRQMYHAFIKAN-IRNG-------KGVDELLDSMKADGIDEDEETKEILV 491
+ ++ N+ + N I NG K D LL +M G+ D+ T IL+
Sbjct: 453 LKEMQ-----NKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILL 507
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 132/305 (43%), Gaps = 13/305 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N + R + +A + KMK GI LT N ++ K G E+ ++L M
Sbjct: 171 TYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGM 230
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD +Y I++ + IL+ M P +V T+ + + KA +
Sbjct: 231 KLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCSPDLV----TFNTLLDGFCKAGM 286
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR--DY 310
+ +A +VL++ D I Y L++ +G L LE+ + YI Y
Sbjct: 287 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYL--LEEIVRQGYIPDVIAY 344
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++++ L K GE EEA K++KE + G + ++++ GYC G V A IL ++V
Sbjct: 345 TSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVS 404
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
++ +V G G + + ++ +G+ PD +++ L
Sbjct: 405 INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVA-----RGYVPDVVTYNTLIDGLCKA 459
Query: 431 GSVQD 435
V++
Sbjct: 460 NRVRE 464
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/371 (18%), Positives = 142/371 (38%), Gaps = 49/371 (13%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+Y LL+ V+ + ++ + G + + +T+ ++ K GQ + + L
Sbjct: 28 HSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRA 87
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVL------------- 235
+ ++ PD + + + I+ + + + MES +P IV
Sbjct: 88 LDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGN 147
Query: 236 --------------------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
D TY + + + +A+ I +A +K + D +
Sbjct: 148 LEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTC 207
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
N L+S G+ E L + D K A Y +++ AL G+ EA ++LK
Sbjct: 208 NILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSC 267
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
S D N ++ G+C G++ A +LE++ + ++ ++ G G+ +
Sbjct: 268 SP---DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQV 324
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-----EAFVAALRTVIPMN 450
F ++ + +G+ PD TS++ L G +++ E V RT + M
Sbjct: 325 AFYLLEEIVR-----QGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMY 379
Query: 451 RQMYHAFIKAN 461
+ + +A
Sbjct: 380 SSLVSGYCRAG 390
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 13/193 (6%)
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
E LR D A YI + ++ L K G ++A K+ + E S + N VI
Sbjct: 83 EFLRALDEFSVAPDVYI---FNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVI 139
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVY 407
G C +G ++ A +LE+++ KG + P+ ++ + ++ A + A
Sbjct: 140 SGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREA-----CAFREK 194
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQM-YHAFIKANIRNGK 466
++ G PD ++S + +G V++ + ++ P+ + Y++ I A GK
Sbjct: 195 MKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGK 254
Query: 467 GVD--ELLDSMKA 477
V+ E+L +M
Sbjct: 255 VVEAAEILKTMSC 267
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 11/169 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L ++ KA+S + G +TYN ++ K + + D+ EM
Sbjct: 413 TYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEM 472
Query: 193 KAKNIFPDNFS-----YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
++ FP++ + + +C G D + + + P++V+ Y S
Sbjct: 473 ASRGCFPNDVTLGSVVFGLC--RVGRVDDAWSLVVEMSRKRHAPNVVV----YTSLIDGL 526
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
K++ +D A VL + D Y LI + G +E + ++D
Sbjct: 527 CKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYD 575
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 186/443 (41%), Gaps = 28/443 (6%)
Query: 58 NKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH--AVQLDLIGRVHGFL 115
NK+ + + + ++ +R + ++L + M R+ C P +H + + L+GR
Sbjct: 103 NKLSLNDFALVFKEFAQRGDWQRSLRLFKHMQRQIWC--KPNEHIYTIMISLLGREGLLE 160
Query: 116 SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
F + ++ +Y AL+N Y R + + +L +MK+ ++ S LTYN ++
Sbjct: 161 KCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVI 220
Query: 174 CLYSKTG-QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH 232
++ G +E + + EM+ + I PD +Y + + R + E++ R M ++
Sbjct: 221 NSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTM-NEGG 279
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
+V D +TY + K N +DK S++LK+ + YN L+ YA +GN +
Sbjct: 280 VVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDAT 339
Query: 293 RLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
++ L + A Y +L K G ++E ++ E ++S D N +I +
Sbjct: 340 GVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVF 399
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
G + + D+ E+ PN F GK G + +++ KG
Sbjct: 400 GEGGYFKEVVTLFHDMAEEN--VEPN-METYEGLIFACGKG--GLHDDAKKILLHMSEKG 454
Query: 413 WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-------QMYHAFIKANIRNG 465
P K T ++ G ++ AL T+ MN + Y+ I R G
Sbjct: 455 MIPSSKAYTGVIEAYGQAAMYEE------ALVTLNTMNEMGSKPTIETYNTLIYMFARGG 508
Query: 466 --KGVDELLDSMKADGIDEDEET 486
K + +L M G+ + ++
Sbjct: 509 LYKETEAILLKMGDFGVARERDS 531
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 139/348 (39%), Gaps = 48/348 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y LL Y R + A FR M+E G + TY+ ++ LY K G+Y++V ++ EM
Sbjct: 321 SYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEM 380
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K N PD +Y I+ +G + + + +M ++ ++ + TY K L
Sbjct: 381 KVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDM-AEENVEPNMETYEGLIFACGKGGL 439
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
D A +L E+ + S ++ Y
Sbjct: 440 HDDAKKILLHMSEK-------------GMIPS----------------------SKAYTG 464
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++EA + +EEA L G+ N +I + GL + EAIL + + G
Sbjct: 465 VIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFG 524
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK--PDPKVITSILSKLGDE 430
A +S+ V G+ G+ E A+ YVE + + PD + + ++LS
Sbjct: 525 VARERDSFNGVIEGFRQGGQFEE-------AIKAYVEMEKSRLVPDERTLEAVLSVYCIA 577
Query: 431 GSV-QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSM 475
G V + VE F + I N Y + ++ + + ELLD M
Sbjct: 578 GLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELLDEM 625
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 92/238 (38%), Gaps = 39/238 (16%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ Y ++ Y + ++AL M EMG + TYN ++ ++++ G Y++ +L +
Sbjct: 460 KAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLK 519
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M + + S+ I + E EME + +V D T + Y A
Sbjct: 520 MGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEME-KSRLVPDERTLEAVLSVYCIAG 578
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--------------- 296
L+D++ + ++ + + + Y ++++YA +E L D
Sbjct: 579 LVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELLDEMLTNRASNIHQVIG 638
Query: 297 ----------------------LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
L C + R Y T+LEAL LG+ E A +VL E
Sbjct: 639 QMIKGDFDDDSNWQMVEYVFDKLNSEGCGLGM-RFYNTLLEALWWLGQKERAVRVLGE 695
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 145/328 (44%), Gaps = 12/328 (3%)
Query: 105 LDLIGRVHGF--LSAESYFSNL---KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
LD I R G LSAE + + + Y TY L+ + + K L F +M+
Sbjct: 184 LDAIVRSRGSVKLSAEEVYREMIRSRVSPNVY-TYNILIRGFCSVGELQKGLGCFGEMER 242
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
G + +TYN ++ Y K G+ ++ +L M +K + P+ SY + IN ++
Sbjct: 243 NGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKE 302
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
IL EM + D TY + + Y K +A + + + Y LI
Sbjct: 303 AWEILEEMGYKG-FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALI 361
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
+ N + + +D + R R Y T+++ + G EA ++L E SG S
Sbjct: 362 NSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 421
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC 399
NA I G+C ++ A +++++VEKG A S++ + +G+ G+ +R FQ
Sbjct: 422 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ- 480
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKL 427
MK + VE KG PD +S++ L
Sbjct: 481 MKQEM---VE-KGVSPDAVTYSSLIQGL 504
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 183/432 (42%), Gaps = 37/432 (8%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSN-----LKDDE 128
K F QAL + M R G+ + + ++ + + A +F L+ +E
Sbjct: 331 KEGNFHQALVIHAEMVRNGVSP-SVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 389
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
+TY T L++ + RQ ++A +M E G + S +TYN + + + E+ V
Sbjct: 390 RTYTT---LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGV 446
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
+ EM K + PD SY I+ + + +L+ + +EM + + D TY+S
Sbjct: 447 VQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM-VEKGVSPDAVTYSSLIQGLC 505
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYI 306
+ + +A D+ ++ + D Y LI+ Y G+ ++ L L D + K +
Sbjct: 506 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 565
Query: 307 NRDYITMLEALMKLGEHEEAEKVL-----KEWELSGNSYDTRIPN----------AVIIG 351
Y ++ L K EA+++L +E S +YDT I N A+I G
Sbjct: 566 T--YSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKG 623
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
+C GL+ A+ + E +VE+ + V+ G+ G + F K +
Sbjct: 624 FCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH-----S 678
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAFVA-ALRTVIPMNRQMYHAFIKANIRNG--KGV 468
G+ P + +++ L EG +++ + LR+ ++ ++ N + G + V
Sbjct: 679 GFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAV 738
Query: 469 DELLDSMKADGI 480
+L M DG+
Sbjct: 739 LNVLTDMAKDGL 750
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 122/325 (37%), Gaps = 53/325 (16%)
Query: 116 SAESYFSNLKDDEKTYQTYGALLNCYVRQ----RQTDKALSHFRKMKEMGIALSTLTYND 171
S S F LKD Y + A+ + V+ D+A++ K G L+YN
Sbjct: 123 SGSSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNS 182
Query: 172 IM--CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
++ + S+ +V EM + P+ ++Y I I + + +L+ EME
Sbjct: 183 VLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMER 242
Query: 230 Q---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
P++V TY + Y K ID+A +LK + Q + I YN +I+
Sbjct: 243 NGCLPNVV----TYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIIN------ 292
Query: 287 NKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
L + G +EA ++L+E G + D N
Sbjct: 293 -----------------------------GLCREGSMKEAWEILEEMGYKGFTPDEVTYN 323
Query: 347 AVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSV 406
++ GYC G A I ++V G + + ++ + A R +
Sbjct: 324 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQ---- 379
Query: 407 YVEGKGWKPDPKVITSILSKLGDEG 431
+ +G +P+ + T+++ +G
Sbjct: 380 -MRIRGLRPNERTYTTLIDGFSRQG 403
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 137/305 (44%), Gaps = 8/305 (2%)
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI 197
++ +VR + +KAL +M+ +GI + +TYN ++ Y + E+ ++L +M +K
Sbjct: 284 IDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGC 343
Query: 198 FPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKAS 257
PD SY + + + ++++M + +V D TY + H K + D+A
Sbjct: 344 LPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEAL 403
Query: 258 DVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDYITMLE 315
LK A+E+ + D +GY+ ++ G SE L + L K C + Y ++
Sbjct: 404 WFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV-TYTAVVN 462
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKAT 375
+LGE ++A+K+L+ G+ +T A++ G C G A ++ E +
Sbjct: 463 GFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSP 522
Query: 376 TPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
+++V+ G GK ++ + KG+ P P I +L L +G +
Sbjct: 523 NSITYSVIMHGLRREGKLSEACDVVREMVL-----KGFFPGPVEINLLLQSLCRDGRTHE 577
Query: 436 VEAFV 440
F+
Sbjct: 578 ARKFM 582
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 159/389 (40%), Gaps = 29/389 (7%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+IR R +A+E+ + M+ KG C+ + + G+L E ++D
Sbjct: 318 MIRGYCDLHRVEEAIELLEDMHSKG-CLPDKVSYYT-------IMGYLCKEKRIVEVRDL 369
Query: 128 EKTYQ----------TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYS 177
K TY L++ + D+AL + +E G + L Y+ I+
Sbjct: 370 MKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALC 429
Query: 178 KTGQYEKVPDVLTEMKAK-NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLD 236
K G+ + D++ EM +K + PD +Y +N + +++ + +L+ M + H +
Sbjct: 430 KEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKP-N 488
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
+Y + + + +A +++ +EE + I Y+ ++ G SE +
Sbjct: 489 TVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV-- 546
Query: 297 LEKTACKRYINR--DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
+ + K + + +L++L + G EA K ++E G + + VI G+C
Sbjct: 547 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 606
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
N + A ++L+D+ K ++ + G+ + MK L KG
Sbjct: 607 NDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLH-----KGID 661
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFVAAL 443
P P +++ + G V D+ A + +
Sbjct: 662 PTPVTYRTVIHRYCQMGKVDDLVAILEKM 690
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 119/318 (37%), Gaps = 47/318 (14%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT-------------------------- 190
MK GI + ++ +M YS+ GQ VLT
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 191 ---------EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
M+ I P+ +Y I Y +E +L +M S+ + D +Y
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKG-CLPDKVSYY 351
Query: 242 SAAHFYIKANLIDKASDVLKK-AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
+ + K I + D++KK A+E D + YN LI + + E LW L+
Sbjct: 352 TIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEA--LWFLKDA 409
Query: 301 ACK--RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS-YDTRIPNAVIIGYCNNGL 357
K R Y ++ AL K G EA+ ++ E G+ D AV+ G+C G
Sbjct: 410 QEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGE 469
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP 417
V A+ +L+ + G S+ + G GK+ + M + E W P+
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMS-----EEHWWSPNS 524
Query: 418 KVITSILSKLGDEGSVQD 435
+ I+ L EG + +
Sbjct: 525 ITYSVIMHGLRREGKLSE 542
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 120/304 (39%), Gaps = 49/304 (16%)
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
G C D A +L + HG + +Y ALLN R ++ +A
Sbjct: 463 GFCRLGEVDKAKKLLQVMHTHGH-------------KPNTVSYTALLNGMCRTGKSLEAR 509
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS- 210
+E + +++TY+ IM + G+ + DV+ EM K FP + + S
Sbjct: 510 EMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSL 569
Query: 211 ------YGARSDLE-----GMEIIL-------------REMESQPHIVLDWSTYASAAHF 246
+ AR +E G I + E+++ ++ D A
Sbjct: 570 CRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADV 629
Query: 247 YIKANLID---------KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
+ L+D +A++++KK + + Y +I Y +G +++ + L
Sbjct: 630 FTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAI--L 687
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
EK ++ Y ++E L LG+ EEA+ +L + + + D + A++ GY G+
Sbjct: 688 EKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGV 747
Query: 358 VQNA 361
+A
Sbjct: 748 PLSA 751
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 137/305 (44%), Gaps = 8/305 (2%)
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI 197
++ +VR + +KAL +M+ +GI + +TYN ++ Y + E+ ++L +M +K
Sbjct: 287 IDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGC 346
Query: 198 FPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKAS 257
PD SY + + + ++++M + +V D TY + H K + D+A
Sbjct: 347 LPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEAL 406
Query: 258 DVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDYITMLE 315
LK AEE+ + D +GY+ ++ G SE L + L K C + Y ++
Sbjct: 407 WFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV-TYTAVVN 465
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKAT 375
+LGE ++A+K+L+ G +T A++ G C G A ++ E+ +
Sbjct: 466 GFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSP 525
Query: 376 TPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
+++V+ G GK ++ + KG+ P P I +L L +G +
Sbjct: 526 NSITYSVLMHGLRKEGKLSEACDVVREMVL-----KGFFPGPVEINLLLQSLCRDGRTHE 580
Query: 436 VEAFV 440
F+
Sbjct: 581 ARKFM 585
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 159/389 (40%), Gaps = 35/389 (8%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+IR R +A+E+ D M KG C+ + + G+L E ++D
Sbjct: 321 MIRGYCDLHRVEEAIELLDDMPSKG-CLPDKVSYYT-------IMGYLCKEKRIVEVRDL 372
Query: 128 EKTYQ----------TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYS 177
K TY L++ + D+AL + +E G + + Y+ I+
Sbjct: 373 MKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALC 432
Query: 178 KTGQYEKVPDVLTEMKAK-NIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHI 233
K G+ + D++ EM +K + PD +Y +N + +++ + +L+ M + +P+
Sbjct: 433 KEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNT 492
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
V +Y + + + +A +++ +EE+ + I Y+ L+ G SE
Sbjct: 493 V----SYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACD 548
Query: 294 LWDLEKTACKRYINR--DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
+ + + K + + +L++L + G EA K ++E G + + VI G
Sbjct: 549 V--VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHG 606
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
+C N + A ++L+D+ K ++ + G+ + MK L K
Sbjct: 607 FCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLH-----K 661
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAFV 440
G P P +++ + V D+ A +
Sbjct: 662 GIDPTPVTYRTVIHRYCQMEKVDDLVAIL 690
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 16/281 (5%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
MK GI + + +M YS+ GQ VLT M+ + P+ I+ + +
Sbjct: 236 MKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 295
Query: 217 LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
LE L M+ IV + TY Y + +++A ++L + D + Y
Sbjct: 296 LEKALRFLERMQVV-GIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSY- 353
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRY-INRD---YITMLEALMKLGEHEEAEKVLKE 332
++ L + ++ + DL K K + + RD Y T++ L K +EA LK+
Sbjct: 354 --YTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKD 411
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDA 390
E G D +A++ C G + A+ ++ +++ KG P+ ++ V G+
Sbjct: 412 AEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHC-PPDVVTYTAVVNGFCRL 470
Query: 391 GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G+ ++ + ++ + G+KP+ T++L+ L G
Sbjct: 471 GEVDKAKKLLQ-----IMHTHGYKPNTVSYTALLNGLCRTG 506
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 119/300 (39%), Gaps = 49/300 (16%)
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
G C D A +L I HG+ + +Y ALLN R ++ +A
Sbjct: 466 GFCRLGEVDKAKKLLQIMHTHGY-------------KPNTVSYTALLNGLCRTGKSLEAR 512
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS- 210
+E + +++TY+ +M K G+ + DV+ EM K FP + + S
Sbjct: 513 EMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSL 572
Query: 211 ------YGARSDLE-----GMEIIL-------------REMESQPHIVLDWSTYASAAHF 246
+ AR +E G I + E+++ ++ D A
Sbjct: 573 CRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADV 632
Query: 247 YIKANLID---------KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
+ L+D +A++++KK + + Y +I Y + +++ + L
Sbjct: 633 FTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAI--L 690
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
EK ++ Y ++E L LG+ EEA+K+L + + + D + A++ GY G+
Sbjct: 691 EKMILRQKCKTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIGV 750
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 164/392 (41%), Gaps = 15/392 (3%)
Query: 104 QLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
QL I H L LK +Y ++N Y R + DK KMK+ G+
Sbjct: 681 QLGRINEAHHLL----LLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLK 736
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII 223
++ TY I+ L + + + + +EM + I PD Y ++ + R D+
Sbjct: 737 PNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKF 796
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
EM S+ I D TY + + + + +A + + R + D I + L++ Y
Sbjct: 797 FYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYC 855
Query: 284 SLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
G+ + R+ + + + C + Y T+++ L K G+ + A ++L E G +
Sbjct: 856 KAGHIKDAFRVHNHMIQAGCSPNV-VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 914
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA 402
N+++ G C +G ++ A ++ + G ++ + Y +G+ ++ + +
Sbjct: 915 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTE 974
Query: 403 ALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA-ALRTVIPMNRQMYHAFIKA- 460
L GKG +P +++ G ++D E + L I N ++ +K
Sbjct: 975 ML-----GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQY 1029
Query: 461 NIRNG-KGVDELLDSMKADGIDEDEETKEILV 491
IRN K + M + G++ D +T E LV
Sbjct: 1030 CIRNNLKAATAIYKDMCSRGVEPDGKTYENLV 1061
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/397 (18%), Positives = 156/397 (39%), Gaps = 28/397 (7%)
Query: 114 FLSAESYFSNLKDDEKTYQ---TYGALL-----NCYVRQ-----RQTDKALSHFRKMKEM 160
F F L + K ++ YG +L N Y+ + +T A+ FR+ E+
Sbjct: 604 FFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEV 663
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGM 220
G+ + +YN ++ + G+ + +L M+ K PD SY IN Y +L+ +
Sbjct: 664 GVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKV 723
Query: 221 EIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
++ +M+ Q + + TY S + + +A + + + D I Y L+
Sbjct: 724 WKLIEKMK-QKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVD 782
Query: 281 LYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSG 337
+ G+ + + R I D Y ++ ++G+ EA K+ E G
Sbjct: 783 GFCKRGDIRAASKFF---YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
D ++ GYC G +++A + +++ G + ++ + G G +
Sbjct: 840 LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 899
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHA 456
+ + + G +P+ SI++ L G++++ V + + Y
Sbjct: 900 ELLHEMWKI-----GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 954
Query: 457 FIKANIRNGK--GVDELLDSMKADGIDEDEETKEILV 491
+ A ++G+ E+L M G+ T +L+
Sbjct: 955 LMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLM 991
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 1/212 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++N + ++A+ + + G+ T+TY +M Y K+G+ +K ++LTEM
Sbjct: 916 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEM 975
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P ++ + +N + LE E +L M ++ I + +T+ Y N
Sbjct: 976 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNCLVKQYCIRNN 1034
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A+ + K R + DG Y L+ + + N E L+ K Y
Sbjct: 1035 LKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSV 1094
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
+++ K + EA ++ + G + D I
Sbjct: 1095 LIKGFFKRKKFVEAREIFDQMRRDGLAADKEI 1126
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 116/272 (42%), Gaps = 25/272 (9%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+N Y + A M + G + + +TY ++ K G + ++L EM
Sbjct: 846 TFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 905
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P+ F+Y +N ++E ++ E E+ + D TY + Y K+
Sbjct: 906 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGE 964
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLG--NKSEVLRLWDLEK----------T 300
+DKA ++L + + Q + +N L++ + G E L W L K
Sbjct: 965 MDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNC 1024
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
K+Y R+ + A+ K + + E G +Y+ ++ G+CN ++
Sbjct: 1025 LVKQYCIRNNLKAATAIYK-------DMCSRGVEPDGKTYEN-----LVKGHCNARNMKE 1072
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
A + +++ KG + + ++++V+ G+F K
Sbjct: 1073 AWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKK 1104
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 129/308 (41%), Gaps = 33/308 (10%)
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCL-YSKTGQYEKVPDVLTEM--------KAKNIFPDN 201
+S F + ++ + S + + D++ Y G +V DV ++ +A+ +F
Sbjct: 565 ISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKM 624
Query: 202 FSYRICI-----NSYGARSDLEGME-----IILREMESQPHIVLDW--STYASAAHFYIK 249
+Y + + N Y AR + + I+ RE P + + W ++Y HF +
Sbjct: 625 LNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREF---PEVGVCWNVASYNIVIHFVCQ 681
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
I++A +L E + D I Y+ +I+ Y G +V +L + K + +
Sbjct: 682 LGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYT 741
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ L ++ + EAE+ E G DT + ++ G+C G ++ A ++
Sbjct: 742 YGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEM- 800
Query: 370 EKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ TP+ ++ + +G+ G + L +G +PD T +++
Sbjct: 801 -HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLC-----RGLEPDIITFTELMNGY 854
Query: 428 GDEGSVQD 435
G ++D
Sbjct: 855 CKAGHIKD 862
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 168/400 (42%), Gaps = 54/400 (13%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T T+ ++N ++ + KA M+ +G + ++YN I+ YS G E +L
Sbjct: 226 TVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRIL 285
Query: 190 TEMKAKNIFPDNFSY-----RIC------------------------------INSYGAR 214
M+ K I PD+++Y +C I+ Y +
Sbjct: 286 DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNK 345
Query: 215 SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
DLE R+ + I+ STY H + +A D++K+ ++ D I
Sbjct: 346 GDLE-RAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAIT 404
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLK 331
YN LI+ Y+ GN + +DL + I ++T ++ L + +EA+ + +
Sbjct: 405 YNILINGYSRCGNAKKA---FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFE 461
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+ G S D + NA++ G+C NG V+ A +L+++ K ++ + G G
Sbjct: 462 KILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG 521
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF-VAALRTVIPMN 450
K E + ++ +G KPD +++S G G ++D AF V I N
Sbjct: 522 KVEEARMLLDE-----MKRRGIKPDHISYNTLISGYGRRGDIKD--AFRVRDEMLSIGFN 574
Query: 451 RQM--YHAFIKANIRNGKG--VDELLDSMKADGIDEDEET 486
+ Y+A IK +N +G +ELL M GI D+ T
Sbjct: 575 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDST 614
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 138/300 (46%), Gaps = 12/300 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y + ++A S+ +M + GI S TYN ++ G+ + D++ EM
Sbjct: 334 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 393
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ K I PD +Y I IN Y + + + EM S+ I TY S + + N
Sbjct: 394 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSK-GIEPTHVTYTSLIYVLSRRNR 452
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI- 311
+ +A D+ +K ++ D I +N ++ + + GN V R + L K ++ + D +
Sbjct: 453 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN---VERAFMLLKEMDRKSVPPDEVT 509
Query: 312 --TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
T+++ + G+ EEA +L E + G D N +I GY G +++A + ++++
Sbjct: 510 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 569
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G T ++ + + + + +K ++ KG PD S++ +G+
Sbjct: 570 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVN-----KGISPDDSTYLSLIEGMGN 624
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 161/369 (43%), Gaps = 21/369 (5%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+T +L+ +++ + + A + +M + I+ + T+N ++ + K G+ +K + +
Sbjct: 193 ETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGF 252
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ P+ SY I+ Y +R ++EG IL M + I D TY S K
Sbjct: 253 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK-GIEPDSYTYGSLISGMCKEG 311
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN---R 308
+++AS + K E + + YN LI Y NK ++ R + K+ I
Sbjct: 312 RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC---NKGDLERAFSYRDEMVKKGIMPSVS 368
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ AL G EA+ ++KE G D N +I GY G + A + ++
Sbjct: 369 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 428
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSILSK 426
+ KG T ++ + + + R MK A ++ + +G PD + +++
Sbjct: 429 LSKGIEPTHVTYTSLI---YVLSRRNR----MKEADDLFEKILDQGVSPDVIMFNAMVDG 481
Query: 427 LGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDE 482
G+V+ + + R +P + ++ ++ R GK V+E LLD MK GI
Sbjct: 482 HCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK-VEEARMLLDEMKRRGIKP 540
Query: 483 DEETKEILV 491
D + L+
Sbjct: 541 DHISYNTLI 549
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 184/452 (40%), Gaps = 57/452 (12%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
D +K+ V RI+R LR + S+A+EV M GI
Sbjct: 187 FDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGI---------------- 230
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+ T TY LL+ Y + + + L +M+ G A + +TY
Sbjct: 231 ------------------KPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTY 272
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ SK G++E+ ++ EM + ++Y I Y + ++ +
Sbjct: 273 NVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKG------MLAEALSL 326
Query: 230 QPHIVLDWS--TYASAAHFYIKANLIDKASDVLKKAEERLEQK---DGIGYNFLISLYAS 284
Q +VL + T A+ F + + SD +++ + L D + YN LI Y
Sbjct: 327 QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCR 386
Query: 285 LGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
LGN + L+D ++ Y T+L+ L + GE E A+++ E G + D
Sbjct: 387 LGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVT 446
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
++ G C G + A+ ++++ +G ++A G G T R F + L
Sbjct: 447 YTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEML 506
Query: 405 SVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANI 462
+ KG+ PD + ++ L G++++ + + + VIP + Y + I A++
Sbjct: 507 A-----KGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIP-DYVTYTSIIHAHL 560
Query: 463 RNG---KGVDELLDSMKADGIDEDEETKEILV 491
NG KG E+ M + G+ T +L+
Sbjct: 561 ENGRLRKG-REIFYEMLSKGLTPSVVTYTVLI 591
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 188/475 (39%), Gaps = 42/475 (8%)
Query: 50 LDNWVKNGNKVRVG-----ELQR------------IIRDLRKRKRFSQALEVSDWMNRKG 92
LD++ K G KV+ G E+QR +I L K+ F QA + M + G
Sbjct: 241 LDSYCKGG-KVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 299
Query: 93 ICVFAPCDHAVQLDLIGRVHGFLSAESYFSN----LKDDEKTYQTYGALLNCYVRQRQTD 148
+ V A + + + G + + AE+ LK T TY + + + +
Sbjct: 300 LKVSAYTYNPL---IYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMS 356
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
A+ M + ++YN ++ Y + G K + E+++ +FP +Y +
Sbjct: 357 DAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLL 416
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
+ + +LE + + EM ++ I D TY + K + A + +
Sbjct: 417 DGLCRQGELEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEE 325
+ D Y I LG+ S R + L++ + D I +++ L KLG EE
Sbjct: 476 ELDSYAYATRIVGELKLGDTS---RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEE 532
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
A ++L++ G D ++I + NG ++ I +++ KG + ++ V+
Sbjct: 533 ASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIH 592
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-- 443
G+ G+ ER F ++ KG P+ S+++ L + F A +
Sbjct: 593 GHAGKGRLERAFIYFSE-----MQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVE 647
Query: 444 RTVIPMNRQMYHAFI--KANIRNGKGVDELLDSMKADGIDEDEETKEILVCTMEK 496
+ + P N+ Y I N+ N + L M G+ D T L+ + K
Sbjct: 648 KGIFP-NKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 180/426 (42%), Gaps = 57/426 (13%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGIC--VFAPCDHAVQLDLIGR----VHGFLSAESYF 121
+I L + +A E+ M++KG+ VF +++ +D G+ L E F
Sbjct: 277 VIGGLCRAGEVDEAFELKKLMDKKGLVADVFT---YSILIDGFGKQKRCTEAKLMLEEMF 333
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
S K + + Y AL++ ++RQ + +A +M G+ L+ TYN ++ K G
Sbjct: 334 S--KGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGD 391
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
EK +L EM I PD +Y I Y + ++ +L EM+ + ++V T
Sbjct: 392 MEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMK-KSNLVPTAYTCG 450
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
+ + I+ AS V + + SLG K +
Sbjct: 451 MIINGLCRHGSIEDASRVFE-------------------IMVSLGVKPNAVI-------- 483
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
Y T+++ ++ G +EA ++LK + G D N+VIIG C + ++ A
Sbjct: 484 --------YTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEA 535
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
+ L +++E+G ++ + GY +G+ + + K L G G P+ V T
Sbjct: 536 KDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEML-----GCGIAPNDVVCT 590
Query: 422 SILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKA 477
+++ EGS + + + R+V P + + Y A I +RNGK G ELL
Sbjct: 591 ALIDGYCKEGSTTEATSIFRCMLGRSVHP-DVRTYSALIHGLLRNGKLQGAMELLSEFLE 649
Query: 478 DGIDED 483
G+ D
Sbjct: 650 KGLVPD 655
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 135/329 (41%), Gaps = 44/329 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+N + + ++A F + G+A + +TY I+ Y K+G K + EM
Sbjct: 693 TYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM 752
Query: 193 KAKNIFPDNFSYRICINS---------------------YGARSDLEGM--------EII 223
K + PD+F Y I+ + + S L + ++I
Sbjct: 753 TLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVI 812
Query: 224 ----LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
L E H+ D TY ++ K + +A ++R + + Y L+
Sbjct: 813 EANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALL 872
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELS 336
S Y G +SE+ L+D E A + I D +T M++A +K G+H + K++ +
Sbjct: 873 SGYNMAGRRSEMFALFD-EMIA--KDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKK 929
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G + + + +I C V +LE + E+G + + + + + AGK +
Sbjct: 930 GGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGA 989
Query: 397 FQCMKAALSVYVEGKGWKPDPKVITSILS 425
+ +K+ + W PD + +++
Sbjct: 990 ARVLKSMVRFK-----WVPDSTELNDLIN 1013
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 145/357 (40%), Gaps = 22/357 (6%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T T G ++N R + A F M +G+ + + Y ++ + + G++++ +L
Sbjct: 445 TAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRIL 504
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHF 246
M K + PD Y I +E + L EM +P++ TY + H
Sbjct: 505 KVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVY----TYGALIHG 560
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y K+ + A K+ + + LI Y G+ +E ++ + R +
Sbjct: 561 YCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIF---RCMLGRSV 617
Query: 307 N---RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ R Y ++ L++ G+ + A ++L E+ G D N++I G+C G + A
Sbjct: 618 HPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQ 677
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
+ E + +KG + ++ + G AG+ ER + + GKG + +I
Sbjct: 678 LHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDG-----IPGKGLAHNAVTYATI 732
Query: 424 LSKLGDEGSV-QDVEAFVAALRTVIPMNRQMYHAFIKANIRNG---KGVDELLDSMK 476
+ G++ + F +P + +Y A I + G K + L+S++
Sbjct: 733 IDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQ 789
>gi|302763707|ref|XP_002965275.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
gi|300167508|gb|EFJ34113.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
Length = 445
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 138/308 (44%), Gaps = 18/308 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY A+ + D+A M+ G AL+ +T+N ++ K+G+ ++ V+ M
Sbjct: 120 TYNAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETM 179
Query: 193 KAKNIFPDNFSYRICINSYGARSDLE---GMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+NI P+ + + ++++ + E GM I+ EM P IV T+ + +
Sbjct: 180 LLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIV----TFNALLELFCN 235
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-- 307
+ +D A+++L+ + + + Y+ ++ +A +G E R + + C N
Sbjct: 236 TDQMDSAAELLETMARSKCKPNFVTYSIMVQKFAEMGRMVEA-RAFLEQLVVCGYAPNLL 294
Query: 308 --RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y+ L K GE + A + L G +T N+++ G+C G + AE +L
Sbjct: 295 VCNAYVA---GLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVL 351
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
E+++ +G +++V+ G AG+ F M L V + +PDP ++
Sbjct: 352 EEMIAEGSLPDSTTYSVLIQGLCSAGQIVHAFMVM---LQVTRAVESARPDPATFVKLIE 408
Query: 426 KLGDEGSV 433
KL + G +
Sbjct: 409 KLCELGEM 416
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 101/264 (38%), Gaps = 44/264 (16%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
L++ E T +L+ + + + ++AL M EMG + +T+N ++ L+ T Q +
Sbjct: 181 LRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMD 240
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
++L M P+ +Y I + + + L ++ +V ++
Sbjct: 241 SAAELLETMARSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQL-----VVCGYAPNLLV 295
Query: 244 AHFYI----KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
+ Y+ K +D AS L E + + YN L+
Sbjct: 296 CNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLV-------------------- 335
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
E KLG +EAE+VL+E G+ D+ + +I G C+ G +
Sbjct: 336 ---------------EGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSAGQIV 380
Query: 360 NAEAILEDLVEKGKATTPNSWAVV 383
+A ++ + ++ P+ V
Sbjct: 381 HAFMVMLQVTRAVESARPDPATFV 404
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 164/361 (45%), Gaps = 15/361 (4%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
+L+ +++ +T+KA + +M M I S +T+N ++ + K G+ +K + + M+A
Sbjct: 162 MLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALG 221
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
I P+ +Y I+ Y +R +EG +I M+ + + D TY S K +++A
Sbjct: 222 IKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCR-GVKPDSYTYGSFISGMCKEGKLEEA 280
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
S +L+K +E + + YN LI Y + GN D Y ++ A
Sbjct: 281 SGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHA 340
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
L + +EA+ ++KE G D+ N +I GYC G V+ A + ++++ KG T
Sbjct: 341 LFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPT 400
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSILSKLGDEGSVQ 434
++ + G+ MK A ++ + KG PD + +++ G++
Sbjct: 401 RVTYTSLIYVLSKRGR-------MKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMD 453
Query: 435 DVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETKEIL 490
A + + V+P + ++ ++ R GK EL++ MK+ GI D + L
Sbjct: 454 RAFAMLKEMDQMKVVP-DEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTL 512
Query: 491 V 491
+
Sbjct: 513 I 513
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 194/465 (41%), Gaps = 59/465 (12%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQ--LDLIGRVHG-----FLSAESY 120
+IR + KR A E D M KG+ P HA L L + + L AE +
Sbjct: 127 LIRACCELKRGDDAFECFDMMKGKGV---IPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+K + T+ ++N ++ + KA M+ +GI + +TYN I+ Y G
Sbjct: 184 RMRIKS---SVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRG 240
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE---GMEIILREMESQPHIV--- 234
+ E + MK + + PD+++Y I+ LE GM ++E+ +P V
Sbjct: 241 RVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYN 300
Query: 235 ---------------LDW-------------STYASAAHFYIKANLIDKASDVLKKAEER 266
D+ STY H +D+A ++K+ E+
Sbjct: 301 TLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEK 360
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
D + YN LI+ Y GN + L D + + Y +++ L K G ++A
Sbjct: 361 GLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQA 420
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
+ + ++ G D + NA+I G+C NG + A A+L+++ + ++ + G
Sbjct: 421 DDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQG 480
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF-VAALRT 445
GK E + ++ ++ +G KPD +++S G ++D AF V
Sbjct: 481 RCREGKVEAARELIEE-----MKSRGIKPDHISYNTLISGYSKRGDMKD--AFRVRDEML 533
Query: 446 VIPMNRQM--YHAFIKANIRNGKG--VDELLDSMKADGIDEDEET 486
I N + Y+A I+ +N +G ++LL M + GI ++ T
Sbjct: 534 SIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNT 578
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 10/157 (6%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ AL++ + D+A + ++M +M + +T+N +M + G+ E +++ EMK
Sbjct: 439 FNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMK 498
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKA 250
++ I PD+ SY I+ Y R D++ + EM S P ++ TY + K
Sbjct: 499 SRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLL----TYNALIQGLCKN 554
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN 287
D A +LK E + + N +SL +GN
Sbjct: 555 EEGDHAEQLLK---EMISKGITPNDNTYLSLIEGIGN 588
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 166/397 (41%), Gaps = 48/397 (12%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T T+ ++N ++ + KA M+ +G + ++YN I+ YS G E +L
Sbjct: 248 TVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRIL 307
Query: 190 TEMKAKNIFPDNFSY-----RIC------------------------------INSYGAR 214
M+ K I PD+++Y +C I+ Y +
Sbjct: 308 DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNK 367
Query: 215 SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
DLE R+ + I+ STY H + +A D++K+ ++ D I
Sbjct: 368 GDLE-RAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAIT 426
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
YN LI+ Y+ GN + L + + + Y +++ L + +EA+ + ++
Sbjct: 427 YNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL 486
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G S D + NA++ G+C NG V+ A +L+++ K ++ + G GK E
Sbjct: 487 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 546
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF-VAALRTVIPMNRQM 453
+ ++ +G KPD +++S G G ++D AF V I N +
Sbjct: 547 EARMLLDE-----MKRRGIKPDHISYNTLISGYGRRGDIKD--AFRVRDEMLSIGFNPTL 599
Query: 454 --YHAFIKANIRNGKG--VDELLDSMKADGIDEDEET 486
Y+A IK +N +G +ELL M GI D+ T
Sbjct: 600 LTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDST 636
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 138/300 (46%), Gaps = 12/300 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y + ++A S+ +M + GI S TYN ++ G+ + D++ EM
Sbjct: 356 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 415
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ K I PD +Y I IN Y + + + EM S+ I TY S + + N
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSK-GIEPTHVTYTSLIYVLSRRNR 474
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI- 311
+ +A D+ +K ++ D I +N ++ + + GN V R + L K ++ + D +
Sbjct: 475 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN---VERAFMLLKEMDRKSVPPDEVT 531
Query: 312 --TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
T+++ + G+ EEA +L E + G D N +I GY G +++A + ++++
Sbjct: 532 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 591
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G T ++ + + + + +K ++ KG PD S++ +G+
Sbjct: 592 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVN-----KGISPDDSTYLSLIEGMGN 646
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 161/369 (43%), Gaps = 21/369 (5%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+T +L+ +++ + + A + +M + I+ + T+N ++ + K G+ +K + +
Sbjct: 215 ETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGF 274
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ P+ SY I+ Y +R ++EG IL M + I D TY S K
Sbjct: 275 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK-GIEPDSYTYGSLISGMCKEG 333
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN---R 308
+++AS + K E + + YN LI Y NK ++ R + K+ I
Sbjct: 334 RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC---NKGDLERAFSYRDEMVKKGIMPSVS 390
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ AL G EA+ ++KE G D N +I GY G + A + ++
Sbjct: 391 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 450
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSILSK 426
+ KG T ++ + + + R MK A ++ + +G PD + +++
Sbjct: 451 LSKGIEPTHVTYTSL---IYVLSRRNR----MKEADDLFEKILDQGVSPDVIMFNAMVDG 503
Query: 427 LGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDE 482
G+V+ + + R +P + ++ ++ R GK V+E LLD MK GI
Sbjct: 504 HCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK-VEEARMLLDEMKRRGIKP 562
Query: 483 DEETKEILV 491
D + L+
Sbjct: 563 DHISYNTLI 571
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 155/371 (41%), Gaps = 54/371 (14%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+K E TYG+L++ ++ + ++A F KM E+G+ + +TYN ++ Y G E
Sbjct: 236 VKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLE 295
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+ EM K I P STY
Sbjct: 296 RAFSYRDEMVKKGIMP------------------------------------SVSTYNLL 319
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
H + +A D++K+ ++ D I YN LI+ Y+ GN R +DL
Sbjct: 320 VHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK---RAFDLHNEMLS 376
Query: 304 RYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
+ I ++T ++ L + +EA+ + ++ G S D + NA+I G+C NG V+
Sbjct: 377 KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVER 436
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
A +L+++ K ++ + G GK E + ++ +G KPD
Sbjct: 437 AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE-----MKXRGIKPDHISY 491
Query: 421 TSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQM--YHAFIKANIRNGKG--VDELLDSM 475
+++S G G ++D AF + I N + Y+A IK +N +G +ELL M
Sbjct: 492 NTLISGYGRRGDIKD--AFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 549
Query: 476 KADGIDEDEET 486
GI D+ T
Sbjct: 550 VNKGISPDDST 560
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 138/300 (46%), Gaps = 12/300 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y + ++A S+ +M + GI S TYN ++ G+ + D++ EM
Sbjct: 280 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 339
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ K I PD +Y I IN Y + + + EM S+ I TY S + + N
Sbjct: 340 RKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSK-GIEPTHVTYTSLIYVLSRRNR 398
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI- 311
+ +A D+ +K ++ D I +N +I + + GN V R + L K ++ + D +
Sbjct: 399 MKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGN---VERAFMLLKEMDRKSVPPDEVT 455
Query: 312 --TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
T+++ + G+ EEA +L E + G D N +I GY G +++A + ++++
Sbjct: 456 FNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEML 515
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G T ++ + + + + +K ++ KG PD S++ +G+
Sbjct: 516 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVN-----KGISPDDSTYLSLIEGMGN 570
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 136/321 (42%), Gaps = 21/321 (6%)
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
G+ +K + + M+ P+ SY I+ Y +R ++EG IL M + I D T
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK-GIEPDSYT 245
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
Y S K +++AS + K E + + YN LI Y NK ++ R +
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC---NKGDLERAFSYRD 302
Query: 300 TACKRYIN---RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
K+ I Y ++ AL G EA+ ++KE G D N +I GY G
Sbjct: 303 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 362
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWK 414
+ A + +++ KG T ++ + + + R MK A ++ + +G
Sbjct: 363 NAKRAFDLHNEMLSKGIEPTHVTYTSL---IYVLSRRNR----MKEADDLFEKILDQGVS 415
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGKGVDE--- 470
PD + +++ G+V+ + + R +P + ++ ++ R GK V+E
Sbjct: 416 PDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK-VEEARM 474
Query: 471 LLDSMKADGIDEDEETKEILV 491
LLD MK GI D + L+
Sbjct: 475 LLDEMKXRGIKPDHISYNTLI 495
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 10/191 (5%)
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T++ G E A ++L + G D+ ++I G C G ++ A + + +V
Sbjct: 211 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV 270
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E G ++ + GY + G ER F + KG P ++ L
Sbjct: 271 EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK-----KGIMPSVSTYNLLVHALFM 325
Query: 430 EGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIR--NGKGVDELLDSMKADGIDEDEE 485
EG + + + + +R +IP + Y+ I R N K +L + M + GI+
Sbjct: 326 EGRMGEADDMIKEMRKKGIIP-DAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHV 384
Query: 486 TKEILVCTMEK 496
T L+ + +
Sbjct: 385 TYTSLIYVLSR 395
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 163/367 (44%), Gaps = 28/367 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYGA++N ++ + D AL+ KM++ I + YN I+ K + D+ +M
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276
Query: 193 KAKNIFPDNFSYR---ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ K I PD F+Y C+ +YG SD + + E P +V + + ++K
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF----FNALIDAFVK 332
Query: 250 ANLIDKASDVLKKAEERLEQK----DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
+ +A K +E ++ K D + YN LI + E + ++ + +R
Sbjct: 333 EGKLVEAE---KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF---REMSQRG 386
Query: 306 I---NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+ Y T++ + + + A+ V K+ G D N ++ G CNNG V+ A
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
+ E + ++ ++ + AGK E G+ + +LS+ KG KP+ T+
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD-LFCSLSL----KGVKPNVVTYTT 501
Query: 423 ILSKLGDEGSVQDVEAFVAALRTVIPM-NRQMYHAFIKANIRNG--KGVDELLDSMKADG 479
++S +G ++ +A ++ P+ N Y+ I+A +R+G EL+ M++ G
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Query: 480 IDEDEET 486
D T
Sbjct: 562 FAGDAST 568
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 151/357 (42%), Gaps = 20/357 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T +LLN + + +A++ +M EMG T+T+ ++ + + + ++ M
Sbjct: 147 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 206
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD +Y IN R + + +L +ME + I D Y + K
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME-KGKIEADVVIYNTIIDGLCKYKH 265
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+D A D+ K E + + D YN LIS + G S+ RL LEK IN D
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN-----INPDL 320
Query: 311 I---TMLEALMKLGEHEEAEKVLKEWELSGNSY-DTRIPNAVIIGYCNNGLVQNAEAILE 366
+ +++A +K G+ EAEK+ E S + + D N +I G+C V+ +
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
++ ++G ++ + G+F A + K +S G PD +L
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-----DGVHPDIMTYNILLDG 435
Query: 427 LGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGI 480
L + G+V+ + F + + ++ Y I+A + GK D +L S+ G+
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 123/305 (40%), Gaps = 46/305 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++C + A M E I + +N ++ + K G+ + + EM
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 193 -KAKNIFPDNFSYRICINSYGARSDLE-GMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
K+K+ FPD +Y I + +E GME+ REM SQ +V + TY + H + +A
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV-FREM-SQRGLVGNTVTYTTLIHGFFQA 404
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD- 309
D A V K+ D + YN L+ + GN L +++ + KR + D
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ---KRDMKLDI 461
Query: 310 --YITMLEALMKLGE-----------------------------------HEEAEKVLKE 332
Y TM+EAL K G+ EEA+ + E
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
+ G ++ N +I +G + +++++ G A +++ +V D G+
Sbjct: 522 MKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD-GR 580
Query: 393 TERGF 397
++ F
Sbjct: 581 LDKSF 585
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 144/367 (39%), Gaps = 20/367 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ LL+ + + D +S +M+ +GI+ + TY+ + + + Q +L +M
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 194 AKNIFPDNFSYRICINSY--GAR-SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
P + +N + G R S+ + + EM QP D T+ + H +
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP----DTVTFTTLVHGLFQH 193
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRD 309
N +A ++++ + Q D + Y +I+ G L L + +EK + +
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV-VI 252
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+++ L K ++A + + E G D N +I CN G +A +L D++
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
EK N V DA E + V+ K PD +++
Sbjct: 313 EK----NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 430 EGSVQD-VEAFVAALRTVIPMNRQMY----HAFIKANIRNGKGVDELLDSMKADGIDEDE 484
V++ +E F + + N Y H F +A R+ + M +DG+ D
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA--RDCDNAQMVFKQMVSDGVHPDI 426
Query: 485 ETKEILV 491
T IL+
Sbjct: 427 MTYNILL 433
>gi|302801570|ref|XP_002982541.1| hypothetical protein SELMODRAFT_421992 [Selaginella moellendorffii]
gi|300149640|gb|EFJ16294.1| hypothetical protein SELMODRAFT_421992 [Selaginella moellendorffii]
Length = 487
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 156/385 (40%), Gaps = 55/385 (14%)
Query: 56 NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFL 115
N +++R L+ II LR+R RF QAL++S+WM A D ++L L R F
Sbjct: 98 NSDRLR-SYLRVIIARLRRRSRFLQALQISNWMFHDRRFTVATQDLVMRLYLTSRSGLFE 156
Query: 116 SAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCL 175
AE + + ++ Y ALL+ Y +R +A +R+MKE G+ S YN+++ +
Sbjct: 157 EAEKILAEVHFTQRNEWAYLALLSGYASRRHVTRAEKLWRRMKERGLTKSPHGYNNMLIM 216
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV- 234
Y + + ++ + EM + PD ++ + +++ +G+E R + I+
Sbjct: 217 YKRKKLHSRLRQLFVEMVLSGVVPDATTFLVILSAREQIGGFQGIEKRARHAMANLEILN 276
Query: 235 LDWSTYASAAHFY-IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
L W T Y +L DV + E +G + +++ GN+++
Sbjct: 277 LPWFTMEVVMRVYGFLGDLEGGGKDVEESPAEAFSMAGAMGTS--EAIFQKTGNETK--- 331
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
+ R Y+ M+EA YC
Sbjct: 332 ---------DSDLQRHYV-MIEA-----------------------------------YC 346
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
G+ A+ +L L+ KG++ P ++ + + + +R + +L+ + +
Sbjct: 347 REGMTGKAQGLLRKLIAKGRSPAPFAFNSIIQCFLKDKQLDRALELFYVSLNRFGTRQTL 406
Query: 414 KPDPKV--ITSILSKLGDEGSVQDV 436
P + I + +K GD + + +
Sbjct: 407 ALGPSILGIMEVYAKAGDVNAAEQI 431
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 129/276 (46%), Gaps = 6/276 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T + Y R + A ++M+EMG+ ++ + Y+ +M Y + GQ E +L +
Sbjct: 166 TVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSL 225
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ K + P+ +Y + + Y +E E +++E++ IV+D Y + + Y +
Sbjct: 226 QVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGR 285
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
++ A+ V + + Q + YN +I+ Y LG EV +L + R +N D
Sbjct: 286 MEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEY---RGVNLDEYS 342
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+++ + G +A + +G + T N ++ G+C+ G + +A + ++
Sbjct: 343 YNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLML 402
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
++G S + + G+F AGKTE+ K L+
Sbjct: 403 KRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLA 438
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 142/340 (41%), Gaps = 18/340 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEM-GIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TY L+ Y ++ + ++A +++KE I + + Y ++ Y + G+ E V E
Sbjct: 236 TYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDE 295
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M + + F Y IN Y + +E +L+ E + + LD +Y + Y +
Sbjct: 296 MIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG-VNLDEYSYNTLVDGYCRKG 354
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+ KA + + YN L++ + S G + L+LW L KR + + I
Sbjct: 355 FMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFL---MLKRGVVPNEI 411
Query: 312 ---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
T+L+ K G+ E+A + KE G + + N VI G C N + AE + +
Sbjct: 412 SCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRM 471
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL- 427
E ++ + GY G R Q + + +E G+ P ++ S ++ L
Sbjct: 472 KEWSCPCDSLTYRTLIDGYCKLGDLGRATQ-----IRIEMENLGFVPSVEMFNSFITGLF 526
Query: 428 --GDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG 465
G V D+ ++A + + P N Y A I + G
Sbjct: 527 IAKQSGKVNDIRVEMSA-KGLSP-NTVTYGALIAGWCKEG 564
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 118/321 (36%), Gaps = 39/321 (12%)
Query: 117 AESYFSNL----KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI 172
A + F +L KD + ++ LL + Q AL F +M + G + + N +
Sbjct: 76 APTLFPDLVEVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRL 135
Query: 173 MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP- 231
+ + G V +M+ PD+F+ I +Y + L+EME
Sbjct: 136 LNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGL 195
Query: 232 -------HIVLDW--------------------------STYASAAHFYIKANLIDKASD 258
H V+D TY Y K +++A
Sbjct: 196 DVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEK 255
Query: 259 VLKKAEERLE-QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEAL 317
V+K+ +E + D + Y LI+ Y G + R+ D A + Y TM+
Sbjct: 256 VVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGY 315
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
KLG E EK+L+ E G + D N ++ GYC G + A + +V G T
Sbjct: 316 CKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTT 375
Query: 378 NSWAVVAAGYFDAGKTERGFQ 398
++ + G+ G + +
Sbjct: 376 LTYNTLLNGFCSRGAIDDALK 396
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 7/171 (4%)
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIIL 224
+ + +N ++ K G+ ++ ++K K PDNF+Y I+ A ++ + L
Sbjct: 645 AKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSID-LAFGL 703
Query: 225 REMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
R+ + + TY S + K+ + +A + K + + + I YN LI +
Sbjct: 704 RDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCK 763
Query: 285 LGNKSEVLRLWDLEKTACKRYINR---DYITMLEALMKLGEHEEAEKVLKE 332
GN +E + L++ K I Y ++ L G EEA K+L +
Sbjct: 764 DGNTTEAFK---LKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQ 811
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 7/197 (3%)
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
++ L+ +A G + L ++D A R R +L L++ G+ A V ++
Sbjct: 97 FDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMR 156
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
+G D + YC +G V +A L+++ E G ++ V GY G+TE
Sbjct: 157 CAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTE 216
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR--TVIPMNRQ 452
+ + + ++ KG P+ T ++ EG +++ E V ++ I ++
Sbjct: 217 VARKLLHS-----LQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEV 271
Query: 453 MYHAFIKANIRNGKGVD 469
Y A I + G+ D
Sbjct: 272 AYGALINGYCQRGRMED 288
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 138/349 (39%), Gaps = 14/349 (4%)
Query: 54 VKNGNKVRVGELQ--RIIRDLRKRKRFSQALEVSDWMNRKGICVF-----APCDHAVQLD 106
+K K+ + E+ +I +R R A V D M G+ V + +L
Sbjct: 260 IKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLG 319
Query: 107 LIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
+G V L A Y + DE +Y T L++ Y R+ KA M G +T
Sbjct: 320 RMGEVEKLLQANEY-RGVNLDEYSYNT---LVDGYCRKGFMTKAFETCDMMVRNGFTGTT 375
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
LTYN ++ + G + + M + + P+ S ++ + E + +E
Sbjct: 376 LTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKE 435
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
++ + + T + + K + +A ++ + +E D + Y LI Y LG
Sbjct: 436 TLARG-LARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLG 494
Query: 287 NKSEVLRL-WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
+ ++ ++E + + + + L + + + E G S +T
Sbjct: 495 DLGRATQIRIEMENLGFVPSVEM-FNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTY 553
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
A+I G+C G + +A + ++VEKG +V+ + ++ GK +
Sbjct: 554 GALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVD 602
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 154/401 (38%), Gaps = 49/401 (12%)
Query: 117 AESYFSNLKD-----DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
AE F +K+ D TY+T L++ Y + +A +M+ +G S +N
Sbjct: 464 AEELFHRMKEWSCPCDSLTYRT---LIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNS 520
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ- 230
+ Q KV D+ EM AK + P+ +Y I + +L I+ EM +
Sbjct: 521 FITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKG 580
Query: 231 --PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL--- 285
P++ + S S FY + +D+A+ VL+K + +D I A +
Sbjct: 581 LKPNLFI-CSVLVSC--FY-REGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIES 636
Query: 286 ---GNKSEVLRLWDL------------------EKTACKRYI--NRDYITMLEALMKLGE 322
GN +W++ E K +I N Y +++ G
Sbjct: 637 LAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGS 696
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
+ A + E + + + N++I G C + V A ++ L KG + ++
Sbjct: 697 IDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNT 756
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVA 441
+ G+ G T F+ + + +G +P T ++ L +G +++ ++
Sbjct: 757 LIDGHCKDGNTTEAFKLKQKMIK-----EGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQ 811
Query: 442 ALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGI 480
+ + N Y I+ R G K + +L + M G+
Sbjct: 812 MIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGL 852
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 158/363 (43%), Gaps = 11/363 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ + + L F +M+ G + +TYN I+ Y K + + +L M
Sbjct: 205 TYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLM 264
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P+ SY + IN ++ IL EM S+ V D T+ + + Y
Sbjct: 265 ALKGLNPNLISYNVVINGLCREGQMKETSEILEEM-SKRRYVPDRVTFNTLINGYCNVGN 323
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+A + + + + + Y LI+ GN + + D + R Y T
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ + G ++A +++KE +G + NA+I G+C G +++A +L++++E+G
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
S++ + +G+ + E+ FQ L V + KG PD +S++ L +
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQ-----LKVEMVAKGISPDVATYSSLIQGLCKQRR 498
Query: 433 VQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELL---DSMKADGIDEDEETKE 488
+ +V + F L +P + Y + I A G +D+ L D M G D T
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD-LDKALRLHDEMIQKGFSPDIVTYN 557
Query: 489 ILV 491
+L+
Sbjct: 558 VLI 560
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 179/444 (40%), Gaps = 62/444 (13%)
Query: 6 KLSTNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGEL 65
++ ++I + R Y +R+ TL + +GN + + VKNG V
Sbjct: 288 QMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE-MVKNGLSPNVVTY 346
Query: 66 QRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK 125
+I + K ++A+E D M +G L
Sbjct: 347 TTLINSMCKAGNLNRAMEFLDQMRDRG-------------------------------LH 375
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+ +TY T L++ + +Q +A ++M E G + +TYN ++ + G+ E
Sbjct: 376 PNGRTYTT---LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDA 432
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
+L EM + PD SY I+ + +LE + EM ++ I D +TY+S
Sbjct: 433 SGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG-ISPDVATYSSLIQ 491
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
K + + D+ ++ D + Y LI+ Y G+ + LRL D ++
Sbjct: 492 GLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHD---EMIQKG 548
Query: 306 INRDYIT---MLEALMKLGEHEEAEKVL-----KEWELSGNSYDTRIPN----------A 347
+ D +T ++ K +EA+++L +E + +Y+T I N A
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALA 608
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
++ G+C GL+ A+ +LE +++KG + V+ G+ G E+ + K L
Sbjct: 609 LMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLH-- 666
Query: 408 VEGKGWKPDPKVITSILSKLGDEG 431
G+ P I ++ L EG
Sbjct: 667 ---SGFAPHSVTIMALAKSLYHEG 687
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 154/364 (42%), Gaps = 15/364 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +LN + R +K LS F ++K G++ + TY I+ L++K G K D+L EM
Sbjct: 160 YTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMD 219
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKA 250
+ P+ Y + ++ Y D + +M S +P IV+ Y H + KA
Sbjct: 220 KHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVI----YNILVHAFCKA 275
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+DKA VL+ E Y ++ Y GN + L ++D KTA R Y
Sbjct: 276 GRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSY 335
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++L L K + E A +L E +G + R A+ GY G V+ A + + + +
Sbjct: 336 NSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKK 395
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+ A ++ + +G +R + + + G K + ++L +
Sbjct: 396 ENLAIDIVAYGALLKACCKSGAMQRAAEVFQQ-----ITDAGLKHNRITYCTMLDGWARK 450
Query: 431 GSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETK 487
G + + + + ++ Y +FIKA R+G + V E L M+ ++ + T
Sbjct: 451 GELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTY 510
Query: 488 EILV 491
L+
Sbjct: 511 TTLI 514
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/375 (18%), Positives = 152/375 (40%), Gaps = 21/375 (5%)
Query: 100 DHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKM 157
++ + +D R ++A + F ++ + Y +L++ Y R + A++ +M
Sbjct: 19 EYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEM 78
Query: 158 KEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL 217
GI L+ + I+ Y+ G E + KA+N+ P Y + +Y ++
Sbjct: 79 LSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNM 138
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
E +E +L +ME + + Y + + + + +K + + Y
Sbjct: 139 ETVEALLAQMEEEG-FQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGC 197
Query: 278 LISLYASLGNKS---EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
++ L+ GN + ++L D + + I Y +++ + G+ A KV ++
Sbjct: 198 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMI---YAMIMDGYARGGDFTAAFKVWEDMV 254
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
+G D I N ++ +C G + A +LE++ T ++ + GY G +
Sbjct: 255 SAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQ 314
Query: 395 RGFQCMKAALSVY--VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMN 450
+ AL V+ ++ G +P S+LS L +++ + + V+P N
Sbjct: 315 K-------ALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVP-N 366
Query: 451 RQMYHAFIKANIRNG 465
+ Y A + R G
Sbjct: 367 ERSYTALTEGYARAG 381
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 12/223 (5%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T +TY ++L+ YV+ KAL F ++K G+ ++YN ++ +K Q E +L
Sbjct: 296 TIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLML 355
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM A + P+ SY Y D+E + + M+ + ++ +D Y + K
Sbjct: 356 NEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKE-NLAIDIVAYGALLKACCK 414
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ + +A++V ++ + + + I Y ++ +A K E+ + DL K + D
Sbjct: 415 SGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWA---RKGELSKARDLLNDMQKHGFHLD 471
Query: 310 ---YITMLEALMKLGEHEEAEKVL-----KEWELSGNSYDTRI 344
Y + ++A + G+ EE + L K+ E++ +Y T I
Sbjct: 472 TICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLI 514
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 149/367 (40%), Gaps = 19/367 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCD--HAVQLDLIGRVHGFLSA-----ESY 120
I++ K ++AL++ + M++ G+ +P +A+ +D R F +A +
Sbjct: 198 IVKLFTKAGNMAKALDILEEMDKHGV---SPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 254
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+ LK D Y L++ + + + DKAL ++ + + TY I+ Y K G
Sbjct: 255 SAGLKPD---IVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGG 311
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+K +V +K + P SY ++ +E ++L EM + +V + +Y
Sbjct: 312 NIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANG-VVPNERSY 370
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
+ Y +A ++KA + ++ ++ D + Y L+ G ++
Sbjct: 371 TALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITD 430
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
A ++ Y TML+ + GE +A +L + + G DT + I +G +
Sbjct: 431 AGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEE 490
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
L + EK ++ + G+ A ++ C + A + G + D +
Sbjct: 491 VTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQA-----KASGLQLDSALS 545
Query: 421 TSILSKL 427
+LS L
Sbjct: 546 NCLLSGL 552
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 147/365 (40%), Gaps = 13/365 (3%)
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
D+ + YG L++ Y R A + F M+ I + Y ++ Y++ E
Sbjct: 13 DKPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAV 72
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
EM ++ I + + I+ Y + + E E + +++ ++V Y S
Sbjct: 73 ACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAE-NLVPGGIVYNSIVQA 131
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y +A ++ +L + EE Q + Y +++ +A + ++ + L + K
Sbjct: 132 YCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPT 191
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y +++ K G +A +L+E + G S + I ++ GY G A + E
Sbjct: 192 AATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWE 251
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
D+V G + ++ + AG+ ++ ++ +E P + TSIL
Sbjct: 252 DMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLEN-----IEANRLLPTIETYTSILDG 306
Query: 427 LGDEGSVQD-VEAF----VAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGID 481
G++Q +E F A LR + + KA R + +L+ M A+G+
Sbjct: 307 YVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKA--RQMENARLMLNEMLANGVV 364
Query: 482 EDEET 486
+E +
Sbjct: 365 PNERS 369
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 144/370 (38%), Gaps = 64/370 (17%)
Query: 104 QLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
Q+DL G H T + L+NC R D A+S + KM ++GI
Sbjct: 118 QMDLFGVTH-----------------TVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQ 160
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII 223
+T+ ++ G+ + ++ EM PD SY IN + +
Sbjct: 161 PDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHV 220
Query: 224 LREME---SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
++ME +P++V TY + K L++ A D L + R D I YN ++
Sbjct: 221 FKKMEQNGCKPNVV----TYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVH 276
Query: 281 LYASLGNKSEVLRLWD-LEKTACK----------------RYINR--------------- 308
LG +E RL+ +E+ CK R +N
Sbjct: 277 GLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPP 336
Query: 309 ---DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y T+L L LG+ EA ++ K+ E G D N +I C + LV +A L
Sbjct: 337 DVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFL 396
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
++V++G +++ + G+ + G+ + Q K + G+ P+ + ++
Sbjct: 397 SEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMV-----GRNVMPNTLTFSILVD 451
Query: 426 KLGDEGSVQD 435
L EG V +
Sbjct: 452 GLCQEGMVSE 461
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 192/474 (40%), Gaps = 26/474 (5%)
Query: 31 TLYSIISPLGNPG-TRIEPELDN-WVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM 88
T ++I+ + N G ++ EL N V++G++ V +I L + A+ V M
Sbjct: 165 TFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM 224
Query: 89 NRKG-----ICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVR 143
+ G + D + L+ FLS E + D TY + L C
Sbjct: 225 EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLS-EMVGRGIPPDAITYNSIVHGLCCL-- 281
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
Q ++A F++M++ G +TYN I+ K D L+EM + I PD +
Sbjct: 282 -GQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVT 340
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
Y ++ L + ++ME Q D Y + K L++ A + L +
Sbjct: 341 YTTILHGLCYLGQLNEAIRLFKKME-QKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEM 399
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKL 320
+R + + Y+ ++ + +LG E +L+ K R + + +T +++ L +
Sbjct: 400 VDRGIPPNAVTYSTILHGFCNLGQLDEATQLF---KEMVGRNVMPNTLTFSILVDGLCQE 456
Query: 321 GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
G EA V + G + NA++ GYC + A + E +V KG A +S+
Sbjct: 457 GMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSY 516
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
++ GY ++ + ++ AL + K P+ +I+ L G + D +
Sbjct: 517 NILINGYCNSRRMDKA-----KALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELF 571
Query: 441 AALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETKEILV 491
+ + + M ++ + + +DE L SMK ++ D IL+
Sbjct: 572 KKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILI 625
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 3/212 (1%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K E TY AL+N Y + + ++A F M G A +YN ++ Y + + +K
Sbjct: 472 KGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDK 531
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
+LT+M K + P+ +Y + L + + ++M S ++ TY+
Sbjct: 532 AKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSS-GMLPTLMTYSILL 590
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTACK 303
+ K +D+A + K +E+ + D I Y LI +G K EV + L+
Sbjct: 591 NGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIE-GMFIGGKLEVAKGLFSKLSADGI 649
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
+ R Y M++ L+K G +EA ++ ++W++
Sbjct: 650 QPPGRTYNVMIKGLLKEGLSDEAYELFRKWKM 681
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 81/408 (19%), Positives = 162/408 (39%), Gaps = 42/408 (10%)
Query: 41 NPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCD 100
N TR+ ++ +NG K V II L K + + A + M +GI P D
Sbjct: 285 NEATRLFKRME---QNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGI----PPD 337
Query: 101 HAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQ------------TYGALLNCYVRQRQTD 148
++ HG Y L + + ++ Y +++ + R +
Sbjct: 338 VVTYTTIL---HGL----CYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVN 390
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
A+ +M + GI + +TY+ I+ + GQ ++ + EM +N+ P+ ++ I +
Sbjct: 391 DAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILV 450
Query: 209 NSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
+ G S+ + + E +P+I TY + + Y +++A V +
Sbjct: 451 DGLCQEGMVSEARWVFETMTEKGVEPNIY----TYNALMNGYCLRCKMNEARKVFEIMVG 506
Query: 266 RLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--YITMLEALMKLGEH 323
+ D YN LI+ Y + + L L + + K+ Y T+++ L +G
Sbjct: 507 KGCAPDLHSYNILINGYCNSRRMDKAKAL--LTQMSVKKLTPNTVTYNTIMKGLCYVGRL 564
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
+A+++ K+ SG + ++ G C +G + A + + + EK + ++
Sbjct: 565 LDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTIL 624
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G F GK E + L + G +P + ++ L EG
Sbjct: 625 IEGMFIGGKLE-----VAKGLFSKLSADGIQPPGRTYNVMIKGLLKEG 667
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 129/321 (40%), Gaps = 28/321 (8%)
Query: 55 KNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGF 114
+ G K V II L K + + A+E M +GI P +AV I +HGF
Sbjct: 366 QKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGI---PP--NAVTYSTI--LHGF 418
Query: 115 LS------AESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
+ A F + ++ T+ L++ ++ +A F M E G+ +
Sbjct: 419 CNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNI 478
Query: 167 LTYNDIM---CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII 223
TYN +M CL K + KV ++ M K PD SY I IN Y ++ + +
Sbjct: 479 YTYNALMNGYCLRCKMNEARKVFEI---MVGKGCAPDLHSYNILINGYCNSRRMDKAKAL 535
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
L +M S + + TY + + A ++ KK + Y+ L++
Sbjct: 536 LTQM-SVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLC 594
Query: 284 SLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
G+ E L+L+ K+ ++ + D Y ++E + G+ E A+ + + G
Sbjct: 595 KHGHLDEALKLF---KSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQP 651
Query: 341 DTRIPNAVIIGYCNNGLVQNA 361
R N +I G GL A
Sbjct: 652 PGRTYNVMIKGLLKEGLSDEA 672
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 169/381 (44%), Gaps = 17/381 (4%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
LK+ TY L+N ++R+ D+A+ +M+ G + +T+N ++ SK G
Sbjct: 226 LKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLS 285
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+ ++ M K P+ +Y I+ + L+ +L +M S V + TY +
Sbjct: 286 RAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSS-KCVPNQVTYGTI 344
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTAC 302
+ +K + +L EER ++ + Y+ LIS G +RLW ++ + C
Sbjct: 345 INGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGC 404
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
K + Y ++ L + + +EAE +L+E G + ++++ G+ G Q A
Sbjct: 405 KPNVVV-YGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 463
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVI 420
+ ++++ + +V+ G ++G+ ++ AL+V+ G+G KPD
Sbjct: 464 LVWKEMMSQDMRHNVVCCSVLLNGLCESGR-------LREALTVWTHMLGEGLKPDVVAY 516
Query: 421 TSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ---MYHAFIKANIR--NGKGVDELLDSM 475
+S++ L D GSV ++ P +R Y+ A R N +LL+SM
Sbjct: 517 SSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 576
Query: 476 KADGIDEDEETKEILVCTMEK 496
+G D D T I + T+ +
Sbjct: 577 LDEGCDPDSLTCNIFLETLRE 597
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 169/381 (44%), Gaps = 17/381 (4%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
LK+ TY L+N ++R+ D+A+ +M+ G + +T+N ++ SK G
Sbjct: 202 LKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLS 261
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+ ++ M K P+ +Y I+ + L+ +L +M S V + TY +
Sbjct: 262 RAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSS-KCVPNQVTYGTI 320
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTAC 302
+ +K + +L EER ++ + Y+ LIS G +RLW ++ + C
Sbjct: 321 INGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGC 380
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
K + Y ++ L + + +EAE +L+E G + ++++ G+ G Q A
Sbjct: 381 KPNVVV-YGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 439
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVI 420
+ ++++ + +V+ G ++G+ ++ AL+V+ G+G KPD
Sbjct: 440 LVWKEMMSQDMRHNVVCCSVLLNGLCESGR-------LREALTVWTHMLGEGLKPDVVAY 492
Query: 421 TSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ---MYHAFIKANIR--NGKGVDELLDSM 475
+S++ L D GSV ++ P +R Y+ A R N +LL+SM
Sbjct: 493 SSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 552
Query: 476 KADGIDEDEETKEILVCTMEK 496
+G D D T I + T+ +
Sbjct: 553 LDEGCDPDSLTCNIFLETLRE 573
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 157/366 (42%), Gaps = 52/366 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ Y + R+ +A R M G+ + ++YN ++ + GQ ++ ++L EM
Sbjct: 240 TYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM 299
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ PD ++ IN Y + ++ EM P++V TY + + K
Sbjct: 300 SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV----TYTTLINSMCK 355
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A +++A + L + +R +G R
Sbjct: 356 AGNLNRAMEFLDQMRDRGLHPNG-----------------------------------RT 380
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+++ + G ++A +++KE +G + NA+I G+C G +++A +L++++
Sbjct: 381 YTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMI 440
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E+G S++ + +G+ + E+ FQ L V + KG PD +S++ L
Sbjct: 441 ERGFIPDVVSYSTIISGFCRNQELEKAFQ-----LKVEMVAKGISPDVATYSSLIQGLCK 495
Query: 430 EGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELL---DSMKADGIDEDEE 485
+ + +V + F L +P + Y + I A G +D+ L D M G D
Sbjct: 496 QRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD-LDKALRLHDEMIQKGFSPDIV 554
Query: 486 TKEILV 491
T +L+
Sbjct: 555 TYNVLI 560
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 179/444 (40%), Gaps = 62/444 (13%)
Query: 6 KLSTNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGEL 65
++ ++I + R Y +R+ TL + +GN + + VKNG V
Sbjct: 288 QMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE-MVKNGLSPNVVTY 346
Query: 66 QRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK 125
+I + K ++A+E D M +G L
Sbjct: 347 TTLINSMCKAGNLNRAMEFLDQMRDRG-------------------------------LH 375
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+ +TY T L++ + +Q +A ++M E G + +TYN ++ + G+ E
Sbjct: 376 PNGRTYTT---LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDA 432
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
+L EM + PD SY I+ + +LE + EM ++ I D +TY+S
Sbjct: 433 SGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG-ISPDVATYSSLIQ 491
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
K + + D+ ++ D + Y LI+ Y G+ + LRL D ++
Sbjct: 492 GLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHD---EMIQKG 548
Query: 306 INRDYIT---MLEALMKLGEHEEAEKVL-----KEWELSGNSYDTRIPN----------A 347
+ D +T ++ K +EA+++L +E + +Y+T I N A
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALA 608
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
++ G+C GL+ A+ +LE +++KG + V+ G+ G E+ + K L
Sbjct: 609 LMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLH-- 666
Query: 408 VEGKGWKPDPKVITSILSKLGDEG 431
G+ P I ++ L EG
Sbjct: 667 ---SGFAPHSVTIMALAKSLYHEG 687
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 146/316 (46%), Gaps = 16/316 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y A+++ + R+ + AL F+++ GI + +TY ++ +G++ +L +M
Sbjct: 193 YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252
Query: 194 AKNIFPDNFSYRICINSYGARSD-LEGMEII--LREMESQPHIVLDWSTYASAAHFYIKA 250
+ I P+ +Y ++++ LE EI + M P IV TY+S +
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIV----TYSSLINGLCLH 308
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD- 309
+ ID+A+ + + D + YN LI+ + + ++L+ K + + +N
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLF--RKMSQRGLVNNTV 366
Query: 310 -YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y T+++ ++G+ ++A++ + + G S D N ++ G C+NGL++ A I ED+
Sbjct: 367 TYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDM 426
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
+ ++ V G GK E + L + KG KPD T+++S L
Sbjct: 427 QKSEMDLDIVTYTTVIQGMCKTGKVEDAW-----GLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 429 DEGSVQDVEAFVAALR 444
+G +VEA ++
Sbjct: 482 TKGLQHEVEALYTKMK 497
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 144/335 (42%), Gaps = 24/335 (7%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+D V+ G + + II L K +R + AL+ + RKGI +
Sbjct: 178 VDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGI-------RPNVVTYTA 230
Query: 110 RVHGFLSAESYFSN---LKDDEK-----TYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
V+G ++ + L+D K TY ALL+ +V+ + +A F +M M
Sbjct: 231 LVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMS 290
Query: 162 IALSTLTYNDI---MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
I +TY+ + +CL+ + + ++ D+ M +K FPD SY IN + +E
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDL---MVSKGCFPDVVSYNTLINGFCKAKRVE 347
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+ R+M SQ +V + TY + + + +DKA + + + D YN L
Sbjct: 348 DGMKLFRKM-SQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNIL 406
Query: 279 ISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
+ G + L ++ D++K+ I Y T+++ + K G+ E+A + L G
Sbjct: 407 LGGLCDNGLLEKALVIFEDMQKSEMDLDI-VTYTTVIQGMCKTGKVEDAWGLFCSLSLKG 465
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
D ++ G C GL EA+ + ++G
Sbjct: 466 LKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEG 500
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 117/271 (43%), Gaps = 13/271 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ LL+ V+ ++ D +S +KM+ +GI T+N ++ + Q VL +M
Sbjct: 88 FNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKML 147
Query: 194 AKNIFPDNFSYRICINSYGAR---SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
PD + +N + R SD + + E+ +P IV Y + K
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIV----AYNAIIDSLCKT 203
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
++ A D K+ + + + + Y L++ + G ++ RL + KR I +
Sbjct: 204 RRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL---RDMIKRKITPNV 260
Query: 311 IT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
IT +L+A +K G+ EA+++ +E D +++I G C + + A + +
Sbjct: 261 ITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+V KG S+ + G+ A + E G +
Sbjct: 321 MVSKGCFPDVVSYNTLINGFCKAKRVEDGMK 351
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 178/425 (41%), Gaps = 18/425 (4%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L F A E+ MNR+G C +P + V +D + A + +D
Sbjct: 51 LIHGLCMANSFDDARELFADMNRRG-CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED 109
Query: 128 EKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
TY +++ + + ++AL F +M+ +G + ++N I+ + + ++
Sbjct: 110 GHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 169
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAA 244
V EM+AK+I PD++SY I I+ L E ++ R ++S I TY
Sbjct: 170 CQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSG--ITPSAVTYNVVI 227
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
H A +D+A ++ K + + +N LI + G E RL L++
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRL--LKRMTDDG 285
Query: 305 YINR--DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
++ Y T++ L + ++A +L++ N +I G C G ++ A
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 345
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
+L+ +V G++ ++ + G+ AG+TER + + ++ +G P+ T+
Sbjct: 346 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA-----RGLAPNVVTYTA 400
Query: 423 ILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADG 479
++S L + + A +++ N Y A I G+ G +L M G
Sbjct: 401 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 460
Query: 480 IDEDE 484
I D
Sbjct: 461 ISPDH 465
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 143/345 (41%), Gaps = 22/345 (6%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCD---HAVQLDLIGRVHGFLSAESYFSNL 124
II L ++ + QA +V M K I P D + + +D + + A F +
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEAKDI----PPDSWSYGILIDGLAKAGKLNEAYKLFQRM 211
Query: 125 KDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
D T TY +++ D+AL F+ M+ G S T+N ++ + K G+
Sbjct: 212 LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKL 271
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWST 239
++ +L M PD +Y I+ + + ++ +L +M + +P +V T
Sbjct: 272 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV----T 327
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
+ H KA I +A +VL + D + YN L+ + G R +L
Sbjct: 328 QNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE---RARELLS 384
Query: 300 TACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
R + + +T ++ L K EA V + + SG + + A+I+G+C+ G
Sbjct: 385 DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAG 444
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
V + ++V G + + +AA +G++ R + ++
Sbjct: 445 QVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 489
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 154/369 (41%), Gaps = 23/369 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+YG L++ + + + A + F+K+ G+ ST+ Y ++ ++ ++ +M
Sbjct: 12 SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P +Y + I++ R LE ++++M H V D TY + K++
Sbjct: 72 NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGH-VPDVVTYNTVMDGLCKSSR 130
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
+++A + + E + +N +I L +S++ + + + I D
Sbjct: 131 VEEALLLFNEMERLGCTPNRRSHNTII---LGLCQQSKIDQACQVFHEMEAKDIPPDSWS 187
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ L K G+ EA K+ + SG + N VI G C + A + + +
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
KG + ++ ++ + GK + F+ +K + G PD ++++S L
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKLDEAFRLLK-----RMTDDGHVPDVVTYSTLISGLCS 302
Query: 430 EGSVQDVEAFVAAL------RTVIPMNRQMYHAFIKAN-IRNGKGVDELLDSMKADGIDE 482
V D + + TV+ N + H KA I+ + E+LD+M + G
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQN-TLIHGLCKAGRIKEAR---EVLDAMVSSGQSP 358
Query: 483 DEETKEILV 491
D T LV
Sbjct: 359 DVVTYNTLV 367
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 118/307 (38%), Gaps = 17/307 (5%)
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M +N+ PD++SY I I+ L + +++ + Y S H AN
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKL-LHSGVTPSTVAYTSLIHGLCMAN 59
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRD 309
D A ++ R + YN +I G E L +E +
Sbjct: 60 SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVT-- 117
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+++ L K EEA + E E G + + R N +I+G C + A + ++
Sbjct: 118 YNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM- 176
Query: 370 EKGKATTPNSWA--VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ K P+SW+ ++ G AGK ++ + L + + + L+
Sbjct: 177 -EAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYT 235
Query: 428 GDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDE 484
DE +E F + +R ++ I A+ + GK +DE LL M DG D
Sbjct: 236 LDEA----LELFKSMRSKGCRPSRFTFNILIDAHCKRGK-LDEAFRLLKRMTDDGHVPDV 290
Query: 485 ETKEILV 491
T L+
Sbjct: 291 VTYSTLI 297
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 96/245 (39%), Gaps = 37/245 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ + R QT++A M G+A + +TY ++ K + + V +M
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K+ P+ F+Y I + + ++G + EM I D Y + A K+
Sbjct: 422 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCA-GISPDHVVYGTLAAELCKSGR 480
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+A ++L++ E L +SE W E Y
Sbjct: 481 SARALEILREGRESL--------------------RSEA---WGDEV----------YRF 507
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE---DLV 369
++ L++ G+ E A +++ G +++ G C +G A A+LE DL
Sbjct: 508 AVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLA 567
Query: 370 EKGKA 374
GKA
Sbjct: 568 YGGKA 572
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 154/341 (45%), Gaps = 17/341 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +LL R + A + F +M I +YN ++ K GQ + ++L +M
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
AK I P+ SY I+ + + + EM +I LD +Y + Y K
Sbjct: 401 PAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL-NIALDRVSYNTLLSIYTKVGR 459
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
++A D+L++ +KD + YN L+ Y G EV +++ K Y T
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYST 519
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ K G ++EA +V +E++ +G D + +A+I C NGLV +A ++++++ ++G
Sbjct: 520 LIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 373 KATTPNSWAVVAAGYFDAGKTER--------GFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+ ++ + + + ER +ALS E +G + + +
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMERSADYSNGGSLPFSSSALSELTETEGNR-----VIQLF 634
Query: 425 SKLGDEGS---VQDVEAFVAALRTVIPMNRQMYHAFIKANI 462
+L EG+ +D + + L ++ + R+M+ IK N+
Sbjct: 635 GQLTSEGNNRMTKDCKEGMQELSCILEVFRKMHQLEIKPNV 675
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 149/346 (43%), Gaps = 34/346 (9%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG-QYEKVPDV 188
T + AL++ Y R ++A+S F MKE G+ + +TYN ++ K G ++++V
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 189 LTEMKAKNIFPDNFSYRICINSYGA---RSDL-EGMEIILREMESQPHIVLDWSTYASAA 244
EM+ + PD RI NS A R L E + EM S I D +Y +
Sbjct: 327 FDEMQRNCVQPD----RITFNSLLAVCSRGGLWEAARNLFDEM-SNRRIEQDVFSYNTLL 381
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K +D A ++L + + + + Y+ +I +A G E L L+ R
Sbjct: 382 DAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLF-----GEMR 436
Query: 305 YIN-----RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
Y+N Y T+L K+G EEA +L+E G D NA++ GY G
Sbjct: 437 YLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 360 NAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKP 415
+ + ++ K + PN +++ + GY G K A+ V+ E K G +
Sbjct: 497 EVKKVFAEM--KREHVLPNLLTYSTLIDGYSKGG-------LYKEAMEVFREFKSAGLRA 547
Query: 416 DPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKA 460
D + ++++ L G V + + + + I N Y++ I A
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 115 LSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
L E + N+ D +Y T LL+ Y + ++++AL R+M +GI +TYN ++
Sbjct: 431 LFGEMRYLNIALDRVSYNT---LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLG 487
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL--EGMEIILREMESQPH 232
Y K G+Y++V V EMK +++ P+ +Y I+ Y ++ L E ME + RE +S
Sbjct: 488 GYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGY-SKGGLYKEAME-VFREFKSA-G 544
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
+ D Y++ K L+ A ++ + + + + YN +I +
Sbjct: 545 LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFG 595
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 153/346 (44%), Gaps = 15/346 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +LL Y + +AL+ F +K+ G+ ++Y ++ Y ++ Q EK +V +MK
Sbjct: 226 YNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK 285
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKA 250
+ P+ SY I++YG+ L+ +L EME QP +V ST +A +
Sbjct: 286 KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVV-SISTLLAACG---RC 341
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
I + +L+ A R + + YN I Y S G+ + L L+ + + + Y
Sbjct: 342 RQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTY 401
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++ KLG++ E+ + ++ S S + +++I Y G + AE+ + +
Sbjct: 402 NILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKK 461
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G ++ + Y G +R + K +E G PD + +S++
Sbjct: 462 SGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKE-----MEVNGIPPDAIICSSLMEAFNKG 516
Query: 431 GSVQDVEAFVAAL-RTVIPMNRQMYHAFIKAN--IRNGKGVDELLD 473
G + V + + + IP+N++ Y I + IR+ K E+++
Sbjct: 517 GEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIE 562
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 1/269 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +LLN Y R Q +KA F KMK+ + ++YN ++ Y G ++ +L EM
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ I PD S + + G + +E IL S+ I L+ Y S Y+
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSR-GIDLNTVAYNSGIKSYLSFGD 378
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+KA ++ E + D + YN LIS + LG +E LR ++ + Y +
Sbjct: 379 YEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSS 438
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ + +K G+ EAE + SG D +I Y G + A + +++ G
Sbjct: 439 LIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNG 498
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+ + + G+ ER Q M+
Sbjct: 499 IPPDAIICSSLMEAFNKGGEPERVLQLME 527
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 141/366 (38%), Gaps = 44/366 (12%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY ++N KAL +KM E G+ +T+N ++ QY K
Sbjct: 80 TRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYF 139
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYI 248
MK N+ D F+ I I+ E +E+ E + D TY S H Y
Sbjct: 140 EIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYC 199
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
++ + + + + YN L+ YAS G E L +++L K R
Sbjct: 200 IYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIV 259
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++L A + + E+A +V + + + + NA+I Y + G+++ A +L ++
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
E G +PD I+++L+ G
Sbjct: 320 ----------------------------------------EKDGIQPDVVSISTLLAACG 339
Query: 429 DEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEE 485
+ +E + A R+ I +N Y++ IK+ + G + EL SM+ + D
Sbjct: 340 RCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAV 399
Query: 486 TKEILV 491
T IL+
Sbjct: 400 TYNILI 405
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 145/364 (39%), Gaps = 64/364 (17%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
YG ++ Y R Q D+A F +M+E YN ++ +S+ GQ+ +++ +M
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
I P +Y IN+ GA +W
Sbjct: 74 RAAIPPTRTTYNNVINACGAAG--------------------NW---------------- 97
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
KA ++ KK E D + +N ++S + S+ + +++ K A + D T+
Sbjct: 98 KKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGA---NVTSDTFTL 154
Query: 314 ---LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII------GYCNNGLVQNAEAI 364
+ L+K+G+ EA ++ S T+ P V+ YC G V+N +AI
Sbjct: 155 NIIIHCLVKIGQCGEAIELFN----SMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAI 210
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITS 422
+ +V +G PN +VA RG + AL+++ ++ G +PD TS
Sbjct: 211 FDLMVAEG--VKPN---IVAYNSLLGAYASRGMH--REALAIFNLIKKNGLRPDIVSYTS 263
Query: 423 ILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADG 479
+L+ G + E F + N+ Y+A I A G K LL M+ DG
Sbjct: 264 LLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDG 323
Query: 480 IDED 483
I D
Sbjct: 324 IQPD 327
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 7/222 (3%)
Query: 120 YFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYS 177
+F ++ D + T + Y +L+ Y++Q + +A S F MK+ G LTY ++ Y+
Sbjct: 420 FFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYN 479
Query: 178 KTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME--SQPHIVL 235
G +++ D+ EM+ I PD IC + A + E +L+ ME + I L
Sbjct: 480 AGGGWKRAWDLFKEMEVNGIPPDAI---ICSSLMEAFNKGGEPERVLQLMEFMKKKSIPL 536
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
+ +Y AS++++ + L N +++ G +++L+
Sbjct: 537 NQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLF 596
Query: 296 DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
T+C Y +L L+ +G+ + +VL+ E SG
Sbjct: 597 YKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQWMEDSG 638
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 119/325 (36%), Gaps = 45/325 (13%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL R RQ + + + GI L+T+ YN + Y G YEK ++ T M+ N
Sbjct: 334 LLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESN 393
Query: 197 IFPDNFSYRICIN-----------------------------------SYGARSDLEGME 221
+ PD +Y I I+ SY + L E
Sbjct: 394 VKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAE 453
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
M+ + D TY + Y +A D+ K+ E D I + L+
Sbjct: 454 STFSSMK-KSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEA 512
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+ G VL+L + K + Y ++ + + + + A ++++ + S +S
Sbjct: 513 FNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSIS 572
Query: 342 TRIPNAVI--IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC 399
N V+ +G C G +N + +V +++AVV GK + +
Sbjct: 573 VGTLNHVLNFLGKC--GKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEV 630
Query: 400 MKAALSVYVEGKGWKPDPKVITSIL 424
++ ++E G P + ++L
Sbjct: 631 LQ-----WMEDSGVHPTLYMFQNVL 650
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 170/389 (43%), Gaps = 15/389 (3%)
Query: 110 RVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
+V F A +F + + + T TY ++N + +T A F+KM+E G + +
Sbjct: 177 KVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVV 236
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
TYN ++ K + D+ + MKAK I PD F+Y I + +L EM
Sbjct: 237 TYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEM 296
Query: 228 ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN 287
S +I+ + T+ K + +A V K E + D + Y+ L+ Y+
Sbjct: 297 TSL-NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRME 355
Query: 288 KSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
E +L+D T + Y +++ K +EA+++ E G + D N
Sbjct: 356 IVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNT 415
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
+I G C G ++ A+ + +++ G +++++ G+ G + F+ + S Y
Sbjct: 416 LIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTY 475
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNG 465
+ KPD + ++ + G+++D + L + ++P N Q+Y I + G
Sbjct: 476 L-----KPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLP-NVQIYTTIINNLCKEG 529
Query: 466 KGVDELLDS---MKADGIDEDEETKEILV 491
+DE L++ M+ DG DE + +++
Sbjct: 530 L-LDEALEAFRNMEGDGCPPDEFSYNVII 557
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 111/269 (41%), Gaps = 7/269 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ ++ + +A F+ M EMG+ +TY+ +M YS + + + M
Sbjct: 307 TFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAM 366
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD FSY I I Y ++ + + EM Q + D Y + H +
Sbjct: 367 ITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQ-GLTPDNVNYNTLIHGLCQLGR 425
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
+ +A D+ K D Y+ L+ + G + RL+ + ++ Y+ D
Sbjct: 426 LREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQST---YLKPDIAM 482
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++A+ K G ++A K+ E + G + +I +I C GL+ A ++
Sbjct: 483 YNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNME 542
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
G S+ V+ G+ R Q
Sbjct: 543 GDGCPPDEFSYNVIIRGFLQYKDESRAAQ 571
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 129/309 (41%), Gaps = 14/309 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T L++C+ ++ D A S F KM ++G+ +T+N ++ K G++ + + +
Sbjct: 132 TLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDF 191
Query: 193 KAKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+A P ++Y IN G + G+ + E QP++V TY K
Sbjct: 192 EASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVV----TYNILIDSLCK 247
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-R 308
L+++A D+ + + D YN LI + E L + E T+ N
Sbjct: 248 DKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLN-EMTSLNIMPNIF 306
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
+ +++A+ K G+ EA+ V K G D ++++ GY + A + + +
Sbjct: 307 TFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAM 366
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
+ KG S+ ++ GY A + + Q + +G PD +++ L
Sbjct: 367 ITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIH-----QGLTPDNVNYNTLIHGLC 421
Query: 429 DEGSVQDVE 437
G +++ +
Sbjct: 422 QLGRLREAQ 430
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 163/383 (42%), Gaps = 15/383 (3%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPC--DHAVQLDL 107
LD ++G K+ ++ ++K ++ EV M G+ P + + +D
Sbjct: 156 LDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGV---EPTVGTYTILVDG 212
Query: 108 IGRVHGFLSAESYFSNLKDDEKTYQTY--GALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
+ ES F +K Y A++N Y R +A F + GI +
Sbjct: 213 LSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPN 272
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
TY ++ + K GQ E +LT+M+ + + + + I+ Y R + + ++
Sbjct: 273 ERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGY-CRHGMVDKALEIK 331
Query: 226 EMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
+ + I LD TY + A + N ++ A +L E + + + Y LIS+++
Sbjct: 332 AVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKE 391
Query: 286 GNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
G+ E RL+ D+E + + Y M++ +K G EAE+ KE E G D
Sbjct: 392 GDMVEARRLFRDMEGKGSRPSV-VTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYT 450
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
A++ G+C NG V A + E++ ++G ++ + +G G++E FQ L
Sbjct: 451 YAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNML 510
Query: 405 SVYVEGKGWKPDPKVITSILSKL 427
+ G PD + + ++ L
Sbjct: 511 AA-----GLTPDDTLYSMLVGSL 528
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 158/355 (44%), Gaps = 27/355 (7%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
+++ + + + D A +M G+ L+ YN ++ Y++ +V +VL EM++
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGG 198
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ P +Y I ++ D+ +E + E++ + ++ D Y++ + Y +A + +A
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIKRK-NVAGDVYFYSAVINAYCRAGNVRRA 257
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGN-KSEVLRLWDLEKTACKRYINRDYI---T 312
S+V + + + Y LI+ + +G ++ + L D++ R + + I T
Sbjct: 258 SEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQ----LRGVGHNQIIFNT 313
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
M++ + G ++A ++ E G D N + G C +++A+ +L + E G
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373
Query: 373 KATTPNSWAVVAAGYFDAG---KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+ S+ + + + G + R F+ M EGKG +P ++
Sbjct: 374 VESNYVSYTTLISIHSKEGDMVEARRLFRDM--------EGKGSRPSVVTYNVMIDGYIK 425
Query: 430 EGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVD---ELLDSMKADG 479
GS+++ E F + + ++P + Y A + + NGK VD L + MK G
Sbjct: 426 SGSIREAERFKKEMEKKGLVP-DVYTYAALVHGHCVNGK-VDVALRLFEEMKQRG 478
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 175/420 (41%), Gaps = 52/420 (12%)
Query: 75 RKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHG-----FLSAESYFSNLKDDEK 129
++ + +A EV +W+N + ++P +A L I V G L+ E + E
Sbjct: 199 QESWHRAFEVYEWLNLRHW--YSP--NARMLSTILAVLGKANQEPLAVEVFTRAEPSVEN 254
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP--- 186
T + Y A++ Y R + +K F M+E G +++N ++ K G E P
Sbjct: 255 TVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAG--EMTPNLA 312
Query: 187 -DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
++LTE++ + PD +Y I++ S+LE + +M + H D TY +
Sbjct: 313 IELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAH-HCEPDLWTYNAMIS 371
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
Y + L KA + E R D + YN + +A GN V ++ D+ + K
Sbjct: 372 VYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGN---VEKVKDICEEMVKIG 428
Query: 306 INRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+D Y TM+ K G+++ A ++ ++ + SG + D +I ++ A
Sbjct: 429 FGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAA 488
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGK---TERGFQCM------------------- 400
++ +++ G T +++ + GY AGK E F CM
Sbjct: 489 GMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIH 548
Query: 401 ------KAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ 452
K A++ Y E G P+ + +L LG+ V+D+ V + V MN Q
Sbjct: 549 LRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDMEEVCGMNPQ 608
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 134/347 (38%), Gaps = 47/347 (13%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A + F+ + D T + LL + + ++ ++++++G +S + ++
Sbjct: 834 ARAVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLD 893
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
+++ G +V + MKA FP YR+ + +E +L EME +
Sbjct: 894 AFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEME-EAGFK 952
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
D S + S Y+ + K + + ++ +E + D YN LI +Y E L L
Sbjct: 953 PDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVL 1012
Query: 295 WD------------------------------------LEKTACKRYINRD-YITMLEAL 317
D L+ T CK ++R Y M++
Sbjct: 1013 MDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCK--LDRSFYHIMMKIY 1070
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
G H +A+++ + G + +++ Y ++G Q AE +L +L E +
Sbjct: 1071 RNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLST 1130
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
++ V Y G G Q +K V+ +G +PD ++ T +
Sbjct: 1131 LPYSSVIDAYVRNGDYNAGIQKLKQ-----VKEEGLEPDHRIWTCFI 1172
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/345 (19%), Positives = 136/345 (39%), Gaps = 25/345 (7%)
Query: 108 IGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
+ +++ + A YF ++ Y + R +Q + +M+E G
Sbjct: 904 VKKIYHGMKAAGYFPSM-------HLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLS 956
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
+N ++ +Y + K + +K + PD +Y I I Y + +++ EM
Sbjct: 957 IWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEM 1016
Query: 228 ES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
+ +P + TY S + K L+++A ++ ++ + + D Y+ ++ +Y +
Sbjct: 1017 RTVGLEPKL----DTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRN 1072
Query: 285 LGNKSEVLRLWDLEK-TACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
G+ S+ RL+ + K + I ++ M+ + G+ +EAEKVL + + + T
Sbjct: 1073 SGSHSKAQRLFSMMKDEGVEPTIATMHLLMV-SYGSSGQPQEAEKVLSNLKETDANLSTL 1131
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA- 402
++VI Y NG L+ + E+G W + T + A
Sbjct: 1132 PYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIWTCFIRAASLSQHTSEAILLLNAL 1191
Query: 403 ---ALSVYVEGKGWKPDPKV-----ITSILSKLGDEGSVQDVEAF 439
+ + KP+P V +L LGD + V A
Sbjct: 1192 RDTGFDLPIRLLTEKPEPLVSALDLCLEMLETLGDNAAFNFVNAL 1236
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/403 (19%), Positives = 147/403 (36%), Gaps = 45/403 (11%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
++ + AL+ C + +A F M+ GI S Y +M LY K G E ++
Sbjct: 708 SFTMFEALIQCCLENELFTEASQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHHLI 767
Query: 190 TEMKAKNIFPDNFS-YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
+ +N S Y I +YG + E + M Q I ++ + + Y
Sbjct: 768 DLTETDGTVLNNISVYVDVIEAYGRLKLWQKAESVAGNMR-QSCITVNRKVWNALIEAYA 826
Query: 249 KANLIDKASDVLKK---------------------AEERLE-------QKDGIGYN---- 276
+ ++A V + RLE + IG+
Sbjct: 827 ASGCYERARAVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKS 886
Query: 277 ---FLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEW 333
++ +A GN EV +++ K A Y M + L + + + E +L E
Sbjct: 887 SILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEM 946
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
E +G D I N+V+ Y + I + + E G +++ ++ Y +
Sbjct: 947 EEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRP 1006
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQ 452
+ G M +V G +P S+++ G + V+ E L+ T ++R
Sbjct: 1007 KEGLVLMDEMRTV-----GLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRS 1061
Query: 453 MYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILVCT 493
YH +K +G L MK +G++ T +L+ +
Sbjct: 1062 FYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVS 1104
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 46 IEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQL 105
+EP+LD + + ++ K++ QA E+ + + G C + + +
Sbjct: 1021 LEPKLDTY------------KSLVASFGKQQLVEQAEELFEELQSTG-CKLDRSFYHIMM 1067
Query: 106 DLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
+ A+ FS +KD+ E T T L+ Y Q +A +KE
Sbjct: 1068 KIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDAN 1127
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDN 201
LSTL Y+ ++ Y + G Y L ++K + + PD+
Sbjct: 1128 LSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDH 1165
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 147/337 (43%), Gaps = 19/337 (5%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
Q LLN V+QR TD F+KM ++G+ + YN ++ SK+G EK +L+E
Sbjct: 169 QACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSE 228
Query: 192 MKAKNIFPDNFSYRICINSYGARS-DLEGMEIILREMES--QPHIVLDWSTYASAAHFYI 248
M+ K +FPD F+Y I+ Y +S E + + R S P+IV TY S H +
Sbjct: 229 MEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIV----TYNSFIHGFS 284
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
+ + +A+ + ++ ++ + + + Y LI Y + + E LRL ++ ++
Sbjct: 285 REGRMREATRLFREIKDDV-TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVV 343
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++L L + G EA ++L E D N +I YC + +A + + +
Sbjct: 344 TYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM 403
Query: 369 VEKGKATTPNSWAVVAAGYFDA-----------GKTERGFQCMKAALSVYVEGKGWKPDP 417
+E G S+ + G+ E+GF A S V+G +
Sbjct: 404 IESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQ 463
Query: 418 KVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMY 454
IT +L + G DV + +R + + + Y
Sbjct: 464 DEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDY 500
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 143/334 (42%), Gaps = 21/334 (6%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGF------LSAESYFSNLKDD 127
K+ +AL V D M R G+ AP + V + +HGF A F +KDD
Sbjct: 250 KKSMHFEALSVQDRMERSGV---AP--NIVTYN--SFIHGFSREGRMREATRLFREIKDD 302
Query: 128 -EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
+ TY L++ Y R D+AL M+ G + +TYN I+ + G+ +
Sbjct: 303 VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREAN 362
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
+LTEM K I PDN + IN+Y D+ + ++M + + LD +Y + H
Sbjct: 363 RLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM-IESGLKLDMYSYKALIHG 421
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
+ K ++ A + L E+ Y++L+ + + + E+ +L LE+ KR +
Sbjct: 422 FCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKL--LEEFE-KRGL 478
Query: 307 NRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
D Y ++ + KL + + A+ + + E G D+ I + Y G V A A
Sbjct: 479 CADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASA 538
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+ + + + + ++A Y R F
Sbjct: 539 LFDVMYNRRLMVNLKLYKSISASYAGDNDVLRFF 572
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/447 (20%), Positives = 182/447 (40%), Gaps = 53/447 (11%)
Query: 42 PGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH 101
PG ++ LD G + E+ ++R + + + +AL+ +W+ R AP
Sbjct: 140 PGAPVDDVLD-----GARATPDEVAFVVRAVGESS-WRRALDAFEWLARST----APASR 189
Query: 102 AVQ--LDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
AV L ++GR AE F + T Q + A++ Y R + D A M +
Sbjct: 190 AVAVVLGVLGRARQDSIAEEVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHD 249
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEK--VPDVLTEMKAKNIFPDNFSYRICINSYGARSDL 217
GI +++N ++ SK+G D+L E++ + PD +Y I++ S+L
Sbjct: 250 RGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNL 309
Query: 218 EGMEIILREM---ESQPHI-------------------------------VLDWSTYASA 243
E + EM E +P + + D TY S
Sbjct: 310 EDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSL 369
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
+ + K +DK ++ + +K+ I YN +I +Y +G + L+D +
Sbjct: 370 LYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGC 429
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
Y M+++L K+ + EA KVL++ +G +A+I Y G +AE
Sbjct: 430 TPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEK 489
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
+ ++ G ++ V+ + +G+TE+ + + ++ ++PD + +
Sbjct: 490 TFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMN-----DNYRPDDDMYQVL 544
Query: 424 LSKLGDEGSVQDVEAFVAALRTVIPMN 450
L L E +++E + + + M+
Sbjct: 545 LVALAKEDKCEEIEEIIQDMELLCQMS 571
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 158/394 (40%), Gaps = 62/394 (15%)
Query: 77 RFSQALEVSDWMNRKGI------------------CVFAPCDHAVQLDLIGRV------- 111
RF A ++ D M+ +GI C+ A V LDL+ V
Sbjct: 236 RFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAA----GVALDLLFEVRQSGLRP 291
Query: 112 -----HGFLSAESYFSNLKDDEKTYQ------------TYGALLNCYVRQRQTDKALSHF 154
+ +SA S SNL+D ++ TY A+++ + R + ++A F
Sbjct: 292 DVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLF 351
Query: 155 RKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG-- 212
++ E G +TYN ++ ++K G +KV E+ + +Y I+ YG
Sbjct: 352 GELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKM 411
Query: 213 ARSDLE-GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
R DL G+ +R + P D TY K + I +A VL+ + +
Sbjct: 412 GRLDLAVGLYDEMRAVGCTP----DAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPT 467
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
+ ++ LI YA G +++ + +D + + Y+ ML+ + GE E+ ++ +
Sbjct: 468 LVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYR 527
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
D + +++ + E I++D+ + S V++ A
Sbjct: 528 TMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDM----ELLCQMSLGVISTILIKAR 583
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+G + +K A +G+KPD K + SI++
Sbjct: 584 CVSQGGKLLKKACL-----QGYKPDAKSLWSIMN 612
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 128/307 (41%), Gaps = 20/307 (6%)
Query: 109 GRVHGFLSAESYFSNLKDDEKTYQ----TYGALLNCYVRQRQTDKALSHFRKMKEMGIAL 164
GR AE F L EK + TY +LL + ++ DK ++ + G
Sbjct: 339 GRCGKAEEAERLFGELV--EKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKK 396
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIIL 224
+ +TYN ++ +Y K G+ + + EM+A PD +Y + I+S G + +L
Sbjct: 397 NEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVL 456
Query: 225 REMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
+M +P +V +++ Y K A + D + Y ++ +
Sbjct: 457 EDMADAGLKPTLV----AFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDV 512
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+A G ++LRL+ R + Y +L AL K + EE E+++++ EL
Sbjct: 513 FARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMELLCQMSL 572
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG---FQ 398
I +I C + Q + + + ++ K + W+++ A Y K E G +
Sbjct: 573 GVISTILIKARC---VSQGGKLLKKACLQGYKPDAKSLWSIMNA-YVMTEKHEEGLSLLE 628
Query: 399 CMKAALS 405
C++ +S
Sbjct: 629 CIRDHVS 635
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 162/429 (37%), Gaps = 49/429 (11%)
Query: 107 LIGRVHGFLSAESYFSN---LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
L+ R +SA +S LK + Y L+ C V +A F M+ +GI
Sbjct: 648 LLCRKQTSISAYEQYSQRLMLKYPGQNCNLYEHLITCLVEAELFSEACQVFCDMQFIGIE 707
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR-ICINSYGARSDLEGMEI 222
S Y I+ Y K G E ++ + I + S R I I +YG + EI
Sbjct: 708 ASKNIYESIISTYCKLGFPETAHGLMDDALQSGIPLNILSCRVIIIEAYGNIKLWQQAEI 767
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK-------------------- 262
+++ + I D + + H Y ++ L +KA V
Sbjct: 768 LVKGLRQASGI--DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRAL 825
Query: 263 -AEERLEQKDGI-----GYNFLIS---------LYASLGNKSEVLRLWDLEKTACKRYIN 307
+ RL++ + +F IS +A G+ EV+++++ K A
Sbjct: 826 IVDGRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNM 885
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y +M L + E ++ E E +G D I N+++ Y G + +
Sbjct: 886 HLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQS 945
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
++E G +++ + Y + + E GF + + +G P + S+L+
Sbjct: 946 ILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNE-----MGKRGLTPKLQSYKSLLAAS 1000
Query: 428 GDEGSVQDVEAFVAALRT-VIPMNRQMYHAFIKA--NIRNGKGVDELLDSMKADGIDEDE 484
+ + +R+ +NR +YH +K N N + LL MK DGI+
Sbjct: 1001 AKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTI 1060
Query: 485 ETKEILVCT 493
T IL+ +
Sbjct: 1061 ATMHILMTS 1069
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 7/234 (2%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ +LLN Y D+ ++ + E G+ TYN ++ +Y ++ + E+ +L EM
Sbjct: 923 FNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMG 982
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ + P SY+ + + E + + EM S+ + L+ S Y Y A
Sbjct: 983 KRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSY-QLNRSIYHMMMKIYRNAGNH 1041
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
KA ++L +E + + L++ Y + G E + + K++ Y T+
Sbjct: 1042 SKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTV 1101
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI--IGYCNNGLVQNAEAIL 365
+A +K G+++ K L E + G D ++ I C Q A+AIL
Sbjct: 1102 FDAYLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRAASLCE----QTADAIL 1151
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 103/241 (42%), Gaps = 9/241 (3%)
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARS 215
++++M +S T ++ ++K G +V + MKA P+ YR + +
Sbjct: 840 ELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHN 899
Query: 216 DLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG 272
+E+++ EME +P D S + S + Y A D+ + V + E + D
Sbjct: 900 RFRDVELMIAEMEGAGFKP----DLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDE 955
Query: 273 IGYNFLISLYA-SLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
YN LI +Y SL + L ++ K + + Y ++L A K E+A+++ +
Sbjct: 956 DTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKL-QSYKSLLAASAKAELREQADQLFE 1014
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
E + I + ++ Y N G AE +L + E G T + ++ Y AG
Sbjct: 1015 EMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAG 1074
Query: 392 K 392
+
Sbjct: 1075 Q 1075
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 154/364 (42%), Gaps = 15/364 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +LN + R +K LS F ++K G++ + TY I+ L++K G K D+L EM
Sbjct: 274 YTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMD 333
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKA 250
+ P+ Y + ++ Y D + +M S +P IV TY H + KA
Sbjct: 334 KHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIV----TYNILVHAFCKA 389
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+DKA VL+ + Y ++ Y G+ + L ++D KTA R Y
Sbjct: 390 GRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSY 449
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++L L K + E A +L E +G + R A+ GY G V+ A + + + +
Sbjct: 450 NSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKK 509
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+ A ++ + +G +R + + + G K + ++L +
Sbjct: 510 ENLAIDIVAYGALLKACCKSGAMQRAVEVFQQ-----ITDAGLKHNRITYCTMLDGWARK 564
Query: 431 GSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETK 487
G + + + + ++ Y +FIKA R+G + V E L M+ ++ + T
Sbjct: 565 GELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTY 624
Query: 488 EILV 491
L+
Sbjct: 625 TTLI 628
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 152/367 (41%), Gaps = 19/367 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCD--HAVQLDLIGRVHGFLSA-----ESY 120
I++ K ++AL++ + M++ G+ +P +A+ +D R F +A +
Sbjct: 312 IVKLFTKAGNMAKALDILEEMDKHGV---SPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 368
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+ LK D TY L++ + + + DKAL ++ + + TY I+ Y K G
Sbjct: 369 SAGLKPD---IVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGG 425
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+K +V +K + P SY ++ +E ++L EM + +V + +Y
Sbjct: 426 HIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANG-VVPNERSY 484
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
+ Y +A ++KA + ++ ++ D + Y L+ G + ++
Sbjct: 485 TALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITD 544
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
A ++ Y TML+ + GE +A +LK+ + G DT + I +G +
Sbjct: 545 AGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEE 604
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
L + EK ++ + G+ A ++ C + A + G + D +
Sbjct: 605 VTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQA-----KASGLQLDSALS 659
Query: 421 TSILSKL 427
+LS L
Sbjct: 660 NCLLSGL 666
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/405 (18%), Positives = 161/405 (39%), Gaps = 27/405 (6%)
Query: 76 KRFSQALEVSDWMNRKGICVFAPCD------HAVQLDLIGRVHGFLSAESYFSNLKDD-- 127
+RF + +E+ K + F D + + +D R ++A + F ++
Sbjct: 103 QRFRETMEIDAGNWHKIVNAFQVIDKPVLREYGLLVDFYARHGDKVAARATFEAMRASHI 162
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+ Y +L++ Y R + A++ +M GI L+ + I+ Y+ G E
Sbjct: 163 KPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEH 222
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
+ KA+N+ P Y + +Y ++E +E +L +ME + + Y + + +
Sbjct: 223 WFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEG-FQGNLGLYTTVLNGF 281
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS---EVLRLWDLEKTACKR 304
+ +K + + Y ++ L+ GN + ++L D + +
Sbjct: 282 AEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNK 341
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
I Y +++ + G+ A KV ++ +G D N ++ +C G + A +
Sbjct: 342 MI---YAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGV 398
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITS 422
LE++ T ++ + GY G ++ AL V+ ++ G +P S
Sbjct: 399 LENIQANRLLPTIETYTSILDGYVKGGHIQK-------ALEVFDRIKTAGLRPGVVSYNS 451
Query: 423 ILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNG 465
+LS L +++ + + V+P N + Y A + R G
Sbjct: 452 LLSGLAKARQMENARLMLDEMLANGVVP-NERSYTALTEGYARAG 495
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 157/364 (43%), Gaps = 44/364 (12%)
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+ TY L++ + R+ ++L +M G+ + + Y +M K G+ E+ DVL
Sbjct: 327 HVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLR 386
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
++ NI P+ +Y + ++++ +++G E +L +ME + ++ + T++S + +K
Sbjct: 387 HAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEK-SVIPNVVTFSSIINGLVKR 445
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+ KA+D ++K ++ GI N + Y
Sbjct: 446 GCLGKAADYMRKMKD-----SGIAPNVVT------------------------------Y 470
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T+++ K E A V ++ G + + ++++ G NG ++ AEA+ +D+ E
Sbjct: 471 GTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDE 530
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+G ++ + G F G F+ + + K PD V ++ L
Sbjct: 531 RGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELME-----KNLSPDAVVYNVFINCLCTL 585
Query: 431 GSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETK 487
G + ++F+ +R T + ++ Y+ I A R GK +LL MK + I + T
Sbjct: 586 GKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITY 645
Query: 488 EILV 491
LV
Sbjct: 646 TTLV 649
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 125/273 (45%), Gaps = 14/273 (5%)
Query: 66 QRIIRDLRKRKRFSQALEVSDWMNRKG----ICVFAPCDHAVQLDLIGRVHGFLSAESYF 121
QR+++ +R LE+ + M G I V+ H + + R + E
Sbjct: 681 QRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLT 740
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
+ D T+ AL+ + + D A + + +M G++ + T+N ++ G+
Sbjct: 741 RGIAPDTITFN---ALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGR 797
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD-LEGMEIILREMESQPHIVLDWSTY 240
+ VL++MK + P+N +Y I + Y +S+ +E + + EM S+ I STY
Sbjct: 798 IGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYC-EMVSKGFIP-KASTY 855
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV-LRLWDLEK 299
S + KA ++++A ++ + + R Y+ L++ ++ L N EV + L D+++
Sbjct: 856 NSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKE 915
Query: 300 TACKRYINRDYI-TMLEALMKLGEHEEAEKVLK 331
K ++ I +M A + G EA ++LK
Sbjct: 916 LGFKP--SKGTISSMSRAFSRPGMTGEARRLLK 946
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 144/351 (41%), Gaps = 61/351 (17%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ AL++ Y + + AL+ +M G+AL + YN ++ + +G + +V+ MK
Sbjct: 190 WNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMK 249
Query: 194 AKNIFPDNFSYRICINSYG-------ARSDLEGME------------------------- 221
A + P+ +Y I Y A S EGM
Sbjct: 250 ADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFS 309
Query: 222 ---IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+ REM+ + + + TY + KA ++ +L + R D + Y L
Sbjct: 310 EAYALFREMD-KIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTAL 368
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWEL 335
+ LG + ++ D+ + A I +++T +++A + G + AE+VL + E
Sbjct: 369 MD---RLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQME- 424
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQ-----NAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+ IPN V NGLV+ A + + + G A ++ + G+F
Sbjct: 425 ----EKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFK- 479
Query: 391 GKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
FQ +AAL VY + +G + + V+ S+++ L G+++ EA
Sbjct: 480 ------FQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEAL 524
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 147/419 (35%), Gaps = 69/419 (16%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
+L+N + + A + F+ M E G+ L + Y +M KTG V E+ K
Sbjct: 507 SLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEK 566
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
N+ PD Y + IN + L+EM + + D +TY + + K
Sbjct: 567 NLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNT-GLEPDQATYNTMIAARCREGKTSK 625
Query: 256 ASDVLKKAEERLEQKDGIGYN----------------FLISLYASLG------------- 286
A +LK+ + + + I Y FL++ AS G
Sbjct: 626 ALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQ 685
Query: 287 ------NKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
+L + +L A Y T++ L G A VL E G +
Sbjct: 686 ACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAP 745
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCM 400
DT NA+I+G+C + + NA AI ++ +G + ++ + G AG+ +
Sbjct: 746 DTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVL 805
Query: 401 K----------------------------AALSVYVE--GKGWKPDPKVITSILSKLGDE 430
AL +Y E KG+ P S++S
Sbjct: 806 SDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKA 865
Query: 431 GSV-QDVEAFVAALRTVIPMNRQMYHAFIK--ANIRNGKGVDELLDSMKADGIDEDEET 486
G + Q E F R + Y + + +RNG V LL MK G + T
Sbjct: 866 GMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGT 924
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 144/355 (40%), Gaps = 19/355 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMG----IALSTLTYNDIMCLYSKTGQYEKVPDV 188
T +++ Y R ALS R +A T++YN + S+ G P V
Sbjct: 78 TLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLAPPV 137
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV--LDWSTYASAAHF 246
L+EM + + D + + R+ L G L EM + + LD + +
Sbjct: 138 LSEMCKRGVSWDGVTVSTALVGL-CRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDG 196
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y K + A V+++ + D +GYN L++ + G+ L + + K
Sbjct: 197 YCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPN 256
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y ++ K +EA + + SG D +A++ G C +G A A+
Sbjct: 257 VVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFR 316
Query: 367 DLVEKGKATTPNSWAVVAAGYFDA-GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
++ + G A PN V D+ K RG + + L + +G D + T+++
Sbjct: 317 EMDKIGVA--PNH--VTYCTLIDSLAKARRGSESL--GLLGEMVSRGVVMDLVMYTALMD 370
Query: 426 KLGDEGSVQDVEAFV--AALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMK 476
+LG EG +++ + + A + P N Y + A+ R G G +++L M+
Sbjct: 371 RLGKEGKIEEAKDVLRHAQSDNITP-NFVTYTVLVDAHCRAGNIDGAEQVLLQME 424
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 156/378 (41%), Gaps = 15/378 (3%)
Query: 62 VGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYF 121
V ++I L F +A V + +KG C + V + GR SA F
Sbjct: 65 VHAFTKLIDILVNSGEFERAELVYKKLVQKG-CQLDRFAYNVLIRYFGRSGQLDSAMEMF 123
Query: 122 SNLK--DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
+K E TYG L+N + + +A S F M E G+ + TYN +M + K
Sbjct: 124 REMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKV 183
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
GQ + + EMK + P +Y I +++ + + + +M D T
Sbjct: 184 GQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGD-GCSPDSYT 242
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
Y++ + K+ +++A V ++ +R D + YN L++ A GN R+W L K
Sbjct: 243 YSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMD---RVWKLMK 299
Query: 300 TACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
++ + D + T+++AL K + + A +V SG D N +I Y G
Sbjct: 300 EMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFG 359
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
A +LE++VE G ++ + G+ + F ++ +E G +PD
Sbjct: 360 DAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEE-----METAGCRPD 414
Query: 417 PKVITSILSKLGDEGSVQ 434
++ LG G Q
Sbjct: 415 VVTYNRLMDMLGKRGENQ 432
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 144/356 (40%), Gaps = 49/356 (13%)
Query: 35 IISPLGNPGTRIEPE--LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKG 92
+++ LG G E D ++ G + ++ RK + AL + M R+G
Sbjct: 141 LVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRG 200
Query: 93 ICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTD 148
F P + + LD + +A F + D TY L+N + + +
Sbjct: 201 ---FQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVE 257
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
+A FR+M + G+A+ + YN ++ +K G ++V ++ EM K PD FS+ +
Sbjct: 258 EAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIM 317
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
++ G KAN D A +V + E
Sbjct: 318 DALG------------------------------------KANKPDAAREVFARMVESGC 341
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI--NRDYITMLEALMKLGEHEEA 326
+ D I YN LI YA G+ ++ ++ LE+ +I + Y +++ L G+ +EA
Sbjct: 342 KPDLISYNILIDSYARFGDAAQARQM--LEEMVEAGFIPETKTYNSLIHWLATDGQVDEA 399
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
VL+E E +G D N ++ G Q A + + + +KG S+AV
Sbjct: 400 FAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAV 455
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 123/295 (41%), Gaps = 12/295 (4%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L+ Y R ++ A F + + + + + ++ + +G++E+ V ++ K
Sbjct: 36 LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIKANLI 253
D F+Y + I +G L+ + REM+ S+P D TY + KA +
Sbjct: 96 CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEP----DEYTYGFLVNALGKAGRV 151
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
+A ER + YN L+ + +G L L+ K + Y +
Sbjct: 152 QEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNIL 211
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
L+AL G A K+ + G S D+ + ++ G +G V+ A + ++V++G
Sbjct: 212 LDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGV 271
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
A ++ + A AG +R ++ MK + KG+ PD +I+ LG
Sbjct: 272 AVDLVNYNSLLATLAKAGNMDRVWKLMKE-----MSRKGFHPDAFSFNTIMDALG 321
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 123/249 (49%), Gaps = 9/249 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +LL + + A S +M GI TYN ++ K GQ + ++++EM
Sbjct: 185 TFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEM 244
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
AKNI P+ +Y I+ Y L+ + EM+ I LD +Y + Y K
Sbjct: 245 PAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLG-ISLDRVSYNTLLSIYAKLGR 303
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
++A DV ++ E +KD + YN L+ Y V ++++ K R+++ +
Sbjct: 304 FEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKA---RHVSPNLLT 360
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+++ K G + EA V +E++ +G D + +A+I C NGLV++A ++L+++
Sbjct: 361 YSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 420
Query: 370 EKGKATTPN 378
++G PN
Sbjct: 421 KEG--IRPN 427
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 127/286 (44%), Gaps = 21/286 (7%)
Query: 23 YTNRINKTTLYSIISPLGNPGT---RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFS 79
Y + N T ++I G G R+ D ++NG + ++ K +
Sbjct: 141 YGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWE 200
Query: 80 QALEVSDWMNRKGI---------CVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT 130
A +S M +GI + A C QLD+ + + A++ N+
Sbjct: 201 AARSLSCEMVNRGIDQDIFTYNTLLDAVCKGG-QLDMAFEIMSEMPAKNILPNV------ 253
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
TY +++ Y + + D A + F +MK +GI+L ++YN ++ +Y+K G++E+ DV
Sbjct: 254 -VTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCR 312
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
EM+ I D +Y + YG + + + + EM+++ H+ + TY++ Y K
Sbjct: 313 EMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKAR-HVSPNLLTYSTLIDVYSKG 371
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
L +A DV ++ ++ + D + Y+ LI G + L D
Sbjct: 372 GLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLD 417
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 153/350 (43%), Gaps = 33/350 (9%)
Query: 109 GRVHGFLSAESYFSNLKD-----DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
GRVH L A F +K+ +K+Y T A+L V + Q AL +R M+EMGI
Sbjct: 96 GRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAIL---VGENQLKLALRFYRYMREMGIP 152
Query: 164 LSTLTYNDIM-CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
S + N ++ L +G + + EM + PD+++Y IN + +
Sbjct: 153 PSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKE 212
Query: 223 ILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+ +EME++ P +V TY S H ++ +D A +L++ + + + Y+ L+
Sbjct: 213 LFKEMETKACSPTVV----TYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLM 268
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINR--DYITMLEALMKLGEHEEAEKVLKEWELSG 337
+ G S L L D+ +R++ Y T++ L K G+ +EA ++L +L G
Sbjct: 269 DGHCKSGCSSRALELLDM--MVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQG 326
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA-------VVAAGYFDA 390
D + +I G+C+ A L+++V G + +W+ +V G
Sbjct: 327 LRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQG-LCT 385
Query: 391 GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
R FQ L + + +G D K S+++ ++G + V
Sbjct: 386 EHPNRAFQ-----LYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLV 430
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 149/363 (41%), Gaps = 49/363 (13%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMK---EMGIALSTLTYNDIMCLYSKTGQYEK 184
E T Y L++ YV R DK L+ FR++K E G++ + ++Y ++ LYSK G+ +K
Sbjct: 329 EATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDK 388
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
+ EM+ + I + +Y + I+ Y D + +M +
Sbjct: 389 ALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSN--------------- 433
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACK 303
A + + DGI YN L++ + G + L L +E C
Sbjct: 434 -----AGI----------------KPDGITYNILMNAFCKNGQMNRALELLARMESGDCP 472
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ R Y +++ MK+G+ A + +++ +++G N ++ G G + A +
Sbjct: 473 PTL-RTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAAS 531
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
I++++V G S+ + GY G F+ V G KPD S+
Sbjct: 532 IIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEV-----GLKPDVIAYASL 586
Query: 424 LSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGI 480
L G +Q A A + +PMN +Y+ + + G +++ M+ +G+
Sbjct: 587 LKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGL 646
Query: 481 DED 483
D
Sbjct: 647 TPD 649
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 156/370 (42%), Gaps = 30/370 (8%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L+N Y ++ A + F M+ GI + +Y +++ Y+ + EM+A+
Sbjct: 198 LVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEG 257
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS----TYASAAHFYIKANL 252
+ P+ +Y + I+ YG D+E E + S+ +W Y + H Y KA
Sbjct: 258 VSPNAATYSVIISGYGRLGDVEAAERWFQRALSE-----NWHHNDVIYNNIIHAYCKAGN 312
Query: 253 IDKASDVLKKAEER-LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR--- 308
+++A ++ EE+ LE G+ YN L+ Y + L ++ K + ++
Sbjct: 313 MERAEAIMTAMEEQGLEATLGL-YNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVV 371
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ KLG+ ++A ++ E E G ++ + + +I GY G NA ++ ED+
Sbjct: 372 SYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDM 431
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS--- 425
G ++ ++ + G+ R + L +E P + T I+
Sbjct: 432 SNAGIKPDGITYNILMNAFCKNGQMNRALE-----LLARMESGDCPPTLRTYTIIIDGFM 486
Query: 426 KLGDE----GSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGID 481
K+GD +V+D++ +A R + H +A + ++D M G+
Sbjct: 487 KIGDLRMAFETVRDMK--MAGFRPSAATYNVIMHGLAQAGQMDRAA--SIIDEMVVAGVH 542
Query: 482 EDEETKEILV 491
+E + L+
Sbjct: 543 PNERSYTTLI 552
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 140/395 (35%), Gaps = 80/395 (20%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T +YG L+N Y + + DKAL +M++ GI + TY+ I+ Y + G V
Sbjct: 369 TVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVF 428
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP--------HIVLDW---- 237
+M I PD +Y I +N++ + +L MES I++D
Sbjct: 429 EDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKI 488
Query: 238 ----------------------STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
+TY H +A +D+A+ ++ + + Y
Sbjct: 489 GDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSY 548
Query: 276 NFLISLYASLGN----------------KSEVLRLWDLEKTACKR--------------- 304
LI YA +G+ K +V+ L K CK
Sbjct: 549 TTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAA 608
Query: 305 ----YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
N Y +L+ + G+ EA ++++ G + D + I C G +
Sbjct: 609 AGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLK 668
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC---MKAALSVYVEGKGWKPDP 417
A +E + ++G ++ + G+ A E+ C MK+A G PD
Sbjct: 669 ATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSA--------GMIPDK 720
Query: 418 KVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ 452
+ I++ L +V F LR M Q
Sbjct: 721 PLYHCIMTSLLSRAAVARETVFDGVLRVTSEMVDQ 755
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 173/409 (42%), Gaps = 23/409 (5%)
Query: 49 ELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLI 108
E D V+NG K + +I+ R +F + + V D + G F P V + +
Sbjct: 370 EYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAG---FVP--DIVTWNTL 424
Query: 109 GRVHGFLSAESYFSNLKDDEKTY------QTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
V G +S S + + K TY +L++ Y R D A+ +++M E GI
Sbjct: 425 LAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGI 484
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
TYN ++ ++ G++E+ + EM+ ++ PD +SY +++Y L+ M+
Sbjct: 485 YPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKA 544
Query: 223 ILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+ ++ S +PH +W + K N + +A + ++ D N ++
Sbjct: 545 LSDDIYSERIEPH---NW-LVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMV 600
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
S+Y +V ++ L K + Y +++ +LG+ E+ E +L E + SG
Sbjct: 601 SIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVR 660
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC 399
D N VI Y G ++ A + ++ G ++ + Y E +
Sbjct: 661 PDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIEL 720
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
++ Y+ +G KP+ + SI+ G + D + FV+ L + P
Sbjct: 721 VR-----YMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQLHP 764
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 141/348 (40%), Gaps = 27/348 (7%)
Query: 108 IGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHF-RKMKEMGIAL 164
R F A + F + D + TY +L+ Y + K + MKE G+A
Sbjct: 182 FSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAP 241
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG-ARSDLEGMEII 223
TYN ++ + Y++ V EMKA PD ++ ++ YG AR E +E+I
Sbjct: 242 DRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVI 301
Query: 224 LREME---SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
+EME P +V TY S Y+K L+++A + ++ E + + D + Y LIS
Sbjct: 302 -QEMERVGCPPSVV----TYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLIS 356
Query: 281 LYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKL----GEHEEAEKVLKEWEL 335
G + +D + + CK + AL+K+ G+ E V E
Sbjct: 357 GLDRAGKIDAAIVEYDEMVRNGCK-----PNLCTYNALIKMHGVRGKFPEMMAVFDELRS 411
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
+G D N ++ + NGL + +++ + G +++ + + Y G +
Sbjct: 412 AGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDL 471
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
Q K + G PD ++LS L G + E A +
Sbjct: 472 AMQIYKRMMEA-----GIYPDVSTYNAVLSALARGGRWEQAEKLFAEM 514
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 164/401 (40%), Gaps = 68/401 (16%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +LL+ Y + R+ D+A+ ++M+ +G S +TYN ++ Y K G E+ + EM
Sbjct: 280 TFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 339
Query: 193 KAKNIFPDNFSY------------------------------RIC-----INSYGARSDL 217
+ K I PD +Y +C I +G R
Sbjct: 340 EVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKF 399
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
M + E+ S V D T+ + + + L + S V K+ ++ + Y
Sbjct: 400 PEMMAVFDELRSA-GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVS 458
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYIN-------RDYITMLEALMKLGEHEEAEKVL 330
LIS Y+ G L+DL KR + Y +L AL + G E+AEK+
Sbjct: 459 LISSYSRCG-------LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLF 511
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV-----VAA 385
E E D ++++ Y N + +A+ +D+ + P++W V V +
Sbjct: 512 AEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY--SERIEPHNWLVKTLVLVNS 569
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR- 444
+ + E+ F + + K D V+ +++S G V+ VE ++ ++
Sbjct: 570 KVNNLAEAEKAF--------LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKE 621
Query: 445 TVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
+ I ++ Y++ + R G + + +L +K+ G+ D
Sbjct: 622 SAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPD 662
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 131/307 (42%), Gaps = 6/307 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++C R+ +A F +MK G +T+N ++ +Y K ++++ +V+ EM
Sbjct: 245 TYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM 304
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P +Y I+SY LE + +EME + I D TY + +A
Sbjct: 305 ERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVK-GIKPDVVTYTTLISGLDRAGK 363
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
ID A + + + YN LI ++ G E++ ++D ++A + T
Sbjct: 364 IDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNT 423
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+L + G E V KE + +G + ++I Y GL A I + ++E G
Sbjct: 424 LLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG 483
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
+++ V + G+ E+ + L +E + KPD +S+L +
Sbjct: 484 IYPDVSTYNAVLSALARGGRWEQAEK-----LFAEMEERDCKPDEYSYSSLLHAYANAKR 538
Query: 433 VQDVEAF 439
+ ++A
Sbjct: 539 LDKMKAL 545
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 162/395 (41%), Gaps = 24/395 (6%)
Query: 111 VHGFL------SAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+HG A F +KDD+ T +TY L+ + +AL+ ++M+E GI
Sbjct: 295 IHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGI 354
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+ TY ++ + EK ++L +M K + P+ +Y IN Y R +E
Sbjct: 355 KPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALD 414
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
++ MES+ ++ + TY Y K N + KA VL K ER D + YN LI
Sbjct: 415 VVELMESR-NLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNS 339
GN RL L R + D Y +M+++L K EEA + E
Sbjct: 473 CRSGNFDSAYRLLSLMN---DRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVI 529
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC 399
+ + A+I GYC G V A +LE ++ K ++ + G GK +
Sbjct: 530 PNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLL 589
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFI 458
+ + + +P T ++ +L +G F L + + Y FI
Sbjct: 590 EEKMVKI-----DLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFI 644
Query: 459 KANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
+ R G+ D +++ MK +G+ D T L+
Sbjct: 645 QTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLI 679
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 156/363 (42%), Gaps = 27/363 (7%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY L+ Y + R KA+ KM E + +TYN ++ ++G ++ +L+
Sbjct: 429 RTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M + + PD ++Y I+S +E + +E Q ++ + Y + Y KA
Sbjct: 488 MNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLE-QKDVIPNVVMYTALIDGYCKAG 546
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDY 310
+++A +L+K + + + +N LI + G E L + + K + ++ D
Sbjct: 547 KVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDT 606
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
I ++ L+K G+ + A + ++ SG D I YC G +Q+AE ++ + E
Sbjct: 607 I-LIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKE 665
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G + +++ + GY D G+T F +K + G +P S++ L +
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKR-----MHDTGCEPSQHTFLSLIKHLLEM 720
Query: 431 --GSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKE 488
G V+ E V + +N+ V ELL+ M G+ + ++ E
Sbjct: 721 KYGKVKGGEPGVCVM----------------SNMMEFDIVVELLEKMVEHGVTPNAKSYE 764
Query: 489 ILV 491
L+
Sbjct: 765 KLM 767
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 142/366 (38%), Gaps = 37/366 (10%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y LLN R D+ + +M E + + TYN ++ Y K G E+ ++ +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ PD F+Y I Y R DL+ + +EM + + Y H I
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLK-GCRRNEVAYTHLIHGLCVERRI 304
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYIT 312
D+A D+ K ++ Y LI KSE L L ++E+ K I+ Y
Sbjct: 305 DEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHT-YTV 363
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++++L + E+A ++L + G + NA+I GYC G++++A ++E + +
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRN 423
Query: 373 KATTPNSWAVVAAGY------------------------------FDAGKTERGFQCMKA 402
++ + GY D F
Sbjct: 424 LRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 403 ALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKA 460
LS+ + +G PDP TS++ L V++ +L + VIP N MY A I
Sbjct: 484 LLSL-MNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIP-NVVMYTALIDG 541
Query: 461 NIRNGK 466
+ GK
Sbjct: 542 YCKAGK 547
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 111/291 (38%), Gaps = 18/291 (6%)
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
D + T T L++ ++ D A F++M G TY + Y + G+ +
Sbjct: 597 DLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDA 656
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM-----ESQPHIVLDWSTY 240
D++ +MK + PD F+Y I YG ++L+ M E H L +
Sbjct: 657 EDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKH 716
Query: 241 ASAAHF----------YIKANLI--DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
+ + +N++ D ++L+K E + Y L+ +GN
Sbjct: 717 LLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNL 776
Query: 289 SEVLRLWD-LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
+++D +++ + +L KL +H EA KV+ + G+
Sbjct: 777 RVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKI 836
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+I G + ++ ++L++ G +W ++ G G E ++
Sbjct: 837 LICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYE 887
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 193/455 (42%), Gaps = 63/455 (13%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L +K G + + +I L K +F+QA+E+ D M +G C + ++ +
Sbjct: 156 LAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARG-CRPDVYTYTTIINGLC 214
Query: 110 RVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
++ +A +++ + TY +++ + + R+ ++AL F MK GI+
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIF 274
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY---GARSDLEGMEIIL 224
TYN ++ Q+++ +L EM++ NI PD ++ + +++ G S+ +G+ +
Sbjct: 275 TYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTM 334
Query: 225 REMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
EM +P +V TY+S + Y + + +A + + + D YN LI+ Y
Sbjct: 335 TEMGVEPDVV----TYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCK 390
Query: 285 LGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
+ E +L++ N Y T++ L +LG EA + K +GN +
Sbjct: 391 VKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFT 450
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
+ ++ G+C GYF GK R F+ M++
Sbjct: 451 YSILLDGFCKQ------------------------------GYF--GKAFRLFRAMQSTY 478
Query: 405 SVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-----EAFVAALRTVIPMNRQMYHAFIK 459
S KP+ + ++ + G+++D E FV L+ N Q+Y I
Sbjct: 479 S--------KPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQP----NAQIYTTIIN 526
Query: 460 ANIRNGKGVDELLDS---MKADGIDEDEETKEILV 491
+ G +DE L++ M+ DG DE + +++
Sbjct: 527 GLCKEGL-LDEALEAFRNMEEDGCPPDEISYNVII 560
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 136/319 (42%), Gaps = 18/319 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T L+NC+ ++ D A S K+ ++G+ + +T+ ++ K G++ + ++ +M
Sbjct: 135 TLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDM 194
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIK 249
A+ PD ++Y IN + +L++ME QP++V TY++ + K
Sbjct: 195 VARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVV----TYSTIIDSHRK 250
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+++A D+ + + D YN LI + E L + ++ I D
Sbjct: 251 DRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSL---NIMPD 307
Query: 310 YIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+T +++ + K G+ EA+ VLK G D ++++ GY V A + +
Sbjct: 308 IVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFD 367
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
++ KG S+ ++ GY + + Q + +G P+ +++
Sbjct: 368 AMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIH-----QGLTPNNVSYNTLIHG 422
Query: 427 LGDEGSVQDVEAFVAALRT 445
L GS+++ + T
Sbjct: 423 LCQLGSLREARNLFKNMHT 441
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 180/431 (41%), Gaps = 24/431 (5%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
+ TTL S + G I E D V+NG K + +I+ R +F + + V D
Sbjct: 331 VTYTTLISGLDRAGKIDAAIV-EYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFD 389
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY------QTYGALLNC 140
G F P V + + V G +S S + + K TY +L++
Sbjct: 390 EFRSAG---FVP--DIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISS 444
Query: 141 YVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD 200
Y R D A+ +++M E GI TYN ++ ++ G++E+ + EM+ ++ PD
Sbjct: 445 YSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD 504
Query: 201 NFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKAS 257
+SY +++Y L+ M+ + ++ S +PH +W + K N + +A
Sbjct: 505 EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPH---NW-LVKTLVLVNSKVNNLAEAE 560
Query: 258 DVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEAL 317
+ ++ D N ++S+Y +V ++ L K + Y +++
Sbjct: 561 KAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMY 620
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
+LG+ E+ E +L E + SG D N VI Y G ++ A + ++ G
Sbjct: 621 SRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDV 680
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
++ + Y E + ++ Y+ +G KP+ + SI+ G + D +
Sbjct: 681 VTYNIFVKSYVSNSMFEEAIELVR-----YMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 735
Query: 438 AFVAALRTVIP 448
FV+ L + P
Sbjct: 736 IFVSNLPQLHP 746
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 142/348 (40%), Gaps = 27/348 (7%)
Query: 108 IGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHF-RKMKEMGIAL 164
R F A + F + D + TY +L+ Y + K + MKE G+A
Sbjct: 164 FSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAP 223
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG-ARSDLEGMEII 223
TYN ++ + Y++ V EMKA PD ++ ++ YG AR E +E+I
Sbjct: 224 DRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVI 283
Query: 224 LREME---SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
+EME P +V TY S Y+K L+++A + ++ E + + D + Y LIS
Sbjct: 284 -QEMERVGCPPSVV----TYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLIS 338
Query: 281 LYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKL----GEHEEAEKVLKEWEL 335
G + +D + + CK + AL+K+ G+ E V E+
Sbjct: 339 GLDRAGKIDAAIVEYDEMVRNGCK-----PNLCTYNALIKMHGVRGKFPEMMAVFDEFRS 393
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
+G D N ++ + NGL + +++ + G +++ + + Y G +
Sbjct: 394 AGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDL 453
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
Q K + G PD ++LS L G + E A +
Sbjct: 454 AMQIYKRMMEA-----GIYPDVSTYNAVLSALARGGRWEQAEKLFAEM 496
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 163/401 (40%), Gaps = 68/401 (16%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +LL+ Y + R+ D+A+ ++M+ +G S +TYN ++ Y K G E+ + EM
Sbjct: 262 TFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 321
Query: 193 KAKNIFPDNFSY------------------------------RIC-----INSYGARSDL 217
+ K + PD +Y +C I +G R
Sbjct: 322 EVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKF 381
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
M + E S V D T+ + + + L + S V K+ ++ + Y
Sbjct: 382 PEMMAVFDEFRSA-GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVS 440
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYIN-------RDYITMLEALMKLGEHEEAEKVL 330
LIS Y+ G L+DL KR + Y +L AL + G E+AEK+
Sbjct: 441 LISSYSRCG-------LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLF 493
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV-----VAA 385
E E D ++++ Y N + +A+ +D+ + P++W V V +
Sbjct: 494 AEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY--SERIEPHNWLVKTLVLVNS 551
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR- 444
+ + E+ F + + K D V+ +++S G V+ VE ++ ++
Sbjct: 552 KVNNLAEAEKAF--------LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKE 603
Query: 445 TVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
+ I ++ Y++ + R G + + +L +K+ G+ D
Sbjct: 604 SAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPD 644
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 132/310 (42%), Gaps = 12/310 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++C R+ +A F +MK G +T+N ++ +Y K ++++ +V+ EM
Sbjct: 227 TYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM 286
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIK 249
+ P +Y I+SY LE + +EME +P +V TY + +
Sbjct: 287 ERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV----TYTTLISGLDR 342
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A ID A + + + YN LI ++ G E++ ++D ++A
Sbjct: 343 AGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVT 402
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ T+L + G E V KE + +G + ++I Y GL A I + ++
Sbjct: 403 WNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMM 462
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E G +++ V + G+ E+ + L +E + KPD +S+L +
Sbjct: 463 EAGIYPDVSTYNAVLSALARGGRWEQAEK-----LFAEMEERDCKPDEYSYSSLLHAYAN 517
Query: 430 EGSVQDVEAF 439
+ ++A
Sbjct: 518 AKRLDKMKAL 527
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 180/431 (41%), Gaps = 24/431 (5%)
Query: 27 INKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
+ TTL S + G I E D V+NG K + +I+ R +F + + V D
Sbjct: 349 VTYTTLISGLDRAGKIDAAIV-EYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFD 407
Query: 87 WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY------QTYGALLNC 140
G F P V + + V G +S S + + K TY +L++
Sbjct: 408 EFRSAG---FVP--DIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISS 462
Query: 141 YVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD 200
Y R D A+ +++M E GI TYN ++ ++ G++E+ + EM+ ++ PD
Sbjct: 463 YSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD 522
Query: 201 NFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKAS 257
+SY +++Y L+ M+ + ++ S +PH +W + K N + +A
Sbjct: 523 EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPH---NW-LVKTLVLVNSKVNNLAEAE 578
Query: 258 DVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEAL 317
+ ++ D N ++S+Y +V ++ L K + Y +++
Sbjct: 579 KAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMY 638
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
+LG+ E+ E +L E + SG D N VI Y G ++ A + ++ G
Sbjct: 639 SRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDV 698
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
++ + Y E + ++ Y+ +G KP+ + SI+ G + D +
Sbjct: 699 VTYNIFVKSYVSNSMFEEAIELVR-----YMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 753
Query: 438 AFVAALRTVIP 448
FV+ L + P
Sbjct: 754 IFVSNLPQLHP 764
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 142/348 (40%), Gaps = 27/348 (7%)
Query: 108 IGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHF-RKMKEMGIAL 164
R F A + F + D + TY +L+ Y + K + MKE G+A
Sbjct: 182 FSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAP 241
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG-ARSDLEGMEII 223
TYN ++ + Y++ V EMKA PD ++ ++ YG AR E +E+I
Sbjct: 242 DRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVI 301
Query: 224 LREME---SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
+EME P +V TY S Y+K L+++A + ++ E + + D + Y LIS
Sbjct: 302 -QEMERVGCPPSVV----TYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLIS 356
Query: 281 LYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKL----GEHEEAEKVLKEWEL 335
G + +D + + CK + AL+K+ G+ E V E+
Sbjct: 357 GLDRAGKIDAAIVEYDEMVRNGCK-----PNLCTYNALIKMHGVRGKFPEMMAVFDEFRS 411
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
+G D N ++ + NGL + +++ + G +++ + + Y G +
Sbjct: 412 AGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDL 471
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
Q K + G PD ++LS L G + E A +
Sbjct: 472 AMQIYKRMMEA-----GIYPDVSTYNAVLSALARGGRWEQAEKLFAEM 514
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 163/401 (40%), Gaps = 68/401 (16%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +LL+ Y + R+ D+A+ ++M+ +G S +TYN ++ Y K G E+ + EM
Sbjct: 280 TFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 339
Query: 193 KAKNIFPDNFSY------------------------------RIC-----INSYGARSDL 217
+ K + PD +Y +C I +G R
Sbjct: 340 EVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKF 399
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
M + E S V D T+ + + + L + S V K+ ++ + Y
Sbjct: 400 PEMMAVFDEFRSA-GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVS 458
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYIN-------RDYITMLEALMKLGEHEEAEKVL 330
LIS Y+ G L+DL KR + Y +L AL + G E+AEK+
Sbjct: 459 LISSYSRCG-------LFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLF 511
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV-----VAA 385
E E D ++++ Y N + +A+ +D+ + P++W V V +
Sbjct: 512 AEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY--SERIEPHNWLVKTLVLVNS 569
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR- 444
+ + E+ F + + K D V+ +++S G V+ VE ++ ++
Sbjct: 570 KVNNLAEAEKAF--------LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKE 621
Query: 445 TVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
+ I ++ Y++ + R G + + +L +K+ G+ D
Sbjct: 622 SAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPD 662
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 132/310 (42%), Gaps = 12/310 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++C R+ +A F +MK G +T+N ++ +Y K ++++ +V+ EM
Sbjct: 245 TYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM 304
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIK 249
+ P +Y I+SY LE + +EME +P +V TY + +
Sbjct: 305 ERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV----TYTTLISGLDR 360
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A ID A + + + YN LI ++ G E++ ++D ++A
Sbjct: 361 AGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVT 420
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ T+L + G E V KE + +G + ++I Y GL A I + ++
Sbjct: 421 WNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMM 480
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E G +++ V + G+ E+ + L +E + KPD +S+L +
Sbjct: 481 EAGIYPDVSTYNAVLSALARGGRWEQAEK-----LFAEMEERDCKPDEYSYSSLLHAYAN 535
Query: 430 EGSVQDVEAF 439
+ ++A
Sbjct: 536 AKRLDKMKAL 545
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 159/362 (43%), Gaps = 43/362 (11%)
Query: 75 RKRFSQALEVSDWMNRKGICVFAPCDHAVQ--LDLIGR-------VHGFLSAESYFSNLK 125
++ + +ALE+ + +N + +AP V L ++G+ V F AES +
Sbjct: 192 QQNWQRALELYECLNLRHW--YAPNARMVATILGVLGKANQEALAVEIFARAESSVGD-- 247
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK- 184
T Q Y A++ Y R + K M+E G +++N ++ K+G E
Sbjct: 248 ----TVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPN 303
Query: 185 -VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTY 240
+L E++ I PD +Y I++ S+LE + +MES QP D TY
Sbjct: 304 LALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQP----DLWTY 359
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
+ Y + KA ++ K+ E + D + YN L+ ++ GN +V D+ +
Sbjct: 360 NAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKV---RDICEE 416
Query: 301 ACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
KR +D Y T++ K G H++A ++ ++ + SG + D +I
Sbjct: 417 MVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASK 476
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG---FQCMKAALSVYVEGKGWK 414
V+ A ++ ++++ G T ++++ + Y AGK E F CM+ + G K
Sbjct: 477 VEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRS--------GIK 528
Query: 415 PD 416
PD
Sbjct: 529 PD 530
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 146/330 (44%), Gaps = 12/330 (3%)
Query: 133 TYGALLNCYVRQ--RQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
++ L+N ++ + + AL +++ GI +TYN ++ S+ E+ V +
Sbjct: 286 SFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFS 345
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+M++ PD ++Y I+ YG + E + +E+ES+ D TY S + + +
Sbjct: 346 DMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESK-GFFPDAVTYNSLLYAFSRE 404
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+K D+ ++ +R +D + YN +I +Y G + ++++ K++ + Y
Sbjct: 405 GNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTY 464
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++++L K + EEA V+ E +G +A+I Y G + AE +
Sbjct: 465 TVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRR 524
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILSKLG 428
G +++V+ + F MK A+ +Y E +G+ PD + ++ L
Sbjct: 525 SGIKPDRLAYSVMLDFFLR-------FNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALV 577
Query: 429 DEGSVQDVEAFVAALRTVIPMNRQMYHAFI 458
E V+ + + + MN Q+ + +
Sbjct: 578 RENMWDVVDRIIRDMEELSGMNPQVISSVL 607
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 113/258 (43%), Gaps = 2/258 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY A+++ Y R + KA F++++ G +TYN ++ +S+ G EKV D+ EM
Sbjct: 358 TYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEM 417
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ D +Y I+ YG + + I R+M+S D TY KA+
Sbjct: 418 VKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNP-DAVTYTVLIDSLGKASK 476
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+++A++V+ + + + Y+ LI YA G + E ++ + + + Y
Sbjct: 477 VEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSV 536
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE-K 371
ML+ ++ E ++A + E G + D + ++ + + I+ D+ E
Sbjct: 537 MLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEELS 596
Query: 372 GKATTPNSWAVVAAGYFD 389
G S +V G +D
Sbjct: 597 GMNPQVISSVLVKGGCYD 614
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 154/373 (41%), Gaps = 17/373 (4%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A + F+ + D T + LL + R+ ++ +++++MG+ +S + +
Sbjct: 828 ARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLE 887
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QP 231
+++ G +V + MKA FP YRI + + +E +L EME QP
Sbjct: 888 AFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQP 947
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
D S Y+ + +K ++ + D YN LI +Y E
Sbjct: 948 ----DLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEG 1003
Query: 292 LRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
L + ++ Y +++ A K +E+AE++ +E +G D + ++
Sbjct: 1004 FSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKT 1063
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
Y +G + AE +L + E G T ++ ++ Y +G+ E +K + V
Sbjct: 1064 YRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLD 1123
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDE- 470
P VI + L K GD + +E I + +++ FI+A + +G +E
Sbjct: 1124 TL-PYSSVIDAYLKK-GDFKA--GIEKLTEMKEAGIEPDHRIWTCFIRAATLS-EGTNEA 1178
Query: 471 --LLDSMKADGID 481
LL++++ G D
Sbjct: 1179 IVLLNALQDAGFD 1191
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 182/451 (40%), Gaps = 41/451 (9%)
Query: 42 PGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH 101
PG ++ LD G + E+ ++R + + + +AL+ +W+ R AP
Sbjct: 140 PGAPVDDVLD-----GARASPDEVAFVVRAVGESS-WRRALDAFEWLARSS----APASR 189
Query: 102 AVQ--LDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
AV L ++GR AE F + T Q + A++ Y R + D A M +
Sbjct: 190 AVAVVLGVLGRARQDSIAEEVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHD 249
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEK--VPDVLTEMKAKNIFPDNFSYRICINSYGARSDL 217
GI +++N ++ SK+G D+L E++ + PD +Y I++ S+L
Sbjct: 250 RGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNL 309
Query: 218 EGMEIILREM---ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
E + +M E +P D TY + + + ++A + ++ E+ D I
Sbjct: 310 EDAVTVFEDMIASECRP----DLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAIT 365
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
YN L+ +A GN +V + A + Y TM+ K+G + A + E
Sbjct: 366 YNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMR 425
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK-- 392
G + D +I + A +LED+ + G T +++ + Y G+
Sbjct: 426 AMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRA 485
Query: 393 -TERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR 451
E F CM A+ G KPD +L G D E + R ++ N
Sbjct: 486 DAENTFDCMIAS--------GVKPDRLAYLVMLDVFARSG---DTEKMLCLYRKMMNDNY 534
Query: 452 Q----MYHAFIKANIRNGKG--VDELLDSMK 476
+ MY + A + K ++E++ M+
Sbjct: 535 RPDDDMYQVLLVALAKEDKCEEIEEVIQDME 565
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 158/394 (40%), Gaps = 62/394 (15%)
Query: 77 RFSQALEVSDWMNRKGI------------------CVFAPCDHAVQLDLIGRV------- 111
RF A ++ D M+ +GI C+ A V LDL+ V
Sbjct: 236 RFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAA----GVALDLLFEVRQSGLRP 291
Query: 112 -----HGFLSAESYFSNLKDDEKTYQ------------TYGALLNCYVRQRQTDKALSHF 154
+ +SA S SNL+D ++ TY A+++ + R + ++A F
Sbjct: 292 DVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLF 351
Query: 155 RKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG-- 212
R++ E G +TYN ++ ++K G +KV ++ + +Y I+ YG
Sbjct: 352 RELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKM 411
Query: 213 ARSDLE-GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
R DL G+ +R M P D TY K N I +A VL+ + +
Sbjct: 412 GRLDLAVGLYDEMRAMGCTP----DAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPT 467
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
I ++ LI YA G +++ +D + + Y+ ML+ + G+ E+ + +
Sbjct: 468 LIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYR 527
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+ D + +++ + E +++D+ + + +++ A
Sbjct: 528 KMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDM----ELLCRMNLGIISTMLIKAR 583
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+G + +K A +G+KPD K + SI++
Sbjct: 584 CVSQGAKLLKKACL-----QGYKPDIKSLRSIMN 612
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 164/429 (38%), Gaps = 49/429 (11%)
Query: 107 LIGRVHGFLSAESYFSN---LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
L+ R +SA +S LK ++ Y L+ C + +A F M+ +GI
Sbjct: 648 LLCRKQTSISAYEQYSQRLMLKYPDQNCNLYEYLITCLIEAEFFSEACQVFCDMQFIGIE 707
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR-ICINSYGARSDLEGMEI 222
S Y I+ Y K G E ++ + I + S R I I +YG + EI
Sbjct: 708 ASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEI 767
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK-------------------- 262
+++ + I D + + H Y ++ L +KA V
Sbjct: 768 LVKGLRQASGI--DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRAL 825
Query: 263 -AEERLEQ-----KDGIGYNF---------LISLYASLGNKSEVLRLWDLEKTACKRYIN 307
+ RL++ ++ NF L+ +A G+ EV+++++ K A
Sbjct: 826 IVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNM 885
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y +M+ L + E ++ E E +G D I NA++ Y G +
Sbjct: 886 HLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRS 945
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
++E G +++ + Y + + E GF + + +G P + S+L+
Sbjct: 946 ILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNE-----MGKRGLTPKLQSYKSLLAAS 1000
Query: 428 GDEGSVQDVEAFVAALRT-VIPMNRQMYHAFIKA--NIRNGKGVDELLDSMKADGIDEDE 484
+ + +R+ +NR +YH +K N N + LL MK DGI+
Sbjct: 1001 AKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTI 1060
Query: 485 ETKEILVCT 493
T IL+ +
Sbjct: 1061 ATMHILMTS 1069
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 7/232 (3%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
ALLN Y D+ +R + E G+ TYN ++ +Y ++ + E+ +L EM +
Sbjct: 925 ALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKR 984
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
+ P SY+ + + E + I EM S+ + L+ S Y Y A K
Sbjct: 985 GLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSY-QLNRSIYHMMMKIYRNAGNHSK 1043
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLE 315
A ++L +E + + L++ Y + G E + + K++ Y T+ +
Sbjct: 1044 AENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFD 1103
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI--IGYCNNGLVQNAEAIL 365
A +K G++ L E + G D ++ I C Q A+AIL
Sbjct: 1104 AYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCE----QTADAIL 1151
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 109/269 (40%), Gaps = 13/269 (4%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T + ++ + + D+ ++++M +S T ++ ++K G +V +
Sbjct: 814 TVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIY 873
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHF 246
MKA P+ YR I+ + +E+++ EME +P D + + +
Sbjct: 874 NGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKP----DLAILNALLNM 929
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y A D+ + V + E + D YN LI +Y E L + KR +
Sbjct: 930 YTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLN---EMGKRGL 986
Query: 307 N---RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ Y ++L A K E+A+++ +E + I + ++ Y N G AE
Sbjct: 987 TPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAEN 1046
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
+L + E G T + ++ Y AG+
Sbjct: 1047 LLAVMKEDGIEPTIATMHILMTSYGTAGQ 1075
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 103/255 (40%), Gaps = 20/255 (7%)
Query: 108 IGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
+ +++ + A Y N+ Y++ +LL + R R + ++ +M+ G
Sbjct: 869 VMKIYNGMKAAGYLPNMH----LYRSMISLLCHHNRFRDVELMIA---EMEGAGFKPDLA 921
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
N ++ +Y+ G +++ V + + PD +Y I Y E +L EM
Sbjct: 922 ILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEM 981
Query: 228 ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN 287
+ + +Y S KA L ++A + ++ + Q + Y+ ++ +Y + GN
Sbjct: 982 -GKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGN 1040
Query: 288 KSE------VLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
S+ V++ +E T +I ++ + G+ EAE VL + S
Sbjct: 1041 HSKAENLLAVMKEDGIEPTIATMHI------LMTSYGTAGQPREAENVLNNLKSSSLEVS 1094
Query: 342 TRIPNAVIIGYCNNG 356
T + V Y NG
Sbjct: 1095 TLPYSTVFDAYLKNG 1109
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 136/303 (44%), Gaps = 8/303 (2%)
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI 197
++ +VR + +KAL +M+ +GI + +TYN ++ Y + E+ ++L +M +K
Sbjct: 284 IDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGC 343
Query: 198 FPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKAS 257
PD SY + + + ++++M + +V D TY + H K + D+A
Sbjct: 344 LPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEAL 403
Query: 258 DVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEAL 317
LK A+E+ + D +GY+ ++ G SE L + + C + Y ++
Sbjct: 404 WFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL--INEMDCPPDVV-TYTAVVNGF 460
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
+LGE ++A+K+L+ G+ +T A++ G C G A ++ E +
Sbjct: 461 CRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNS 520
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
+++V+ G GK ++ + KG+ P P I +L L +G +
Sbjct: 521 ITYSVIMHGLRREGKLSEACDVVREMVL-----KGFFPGPVEINLLLQSLCRDGRTHEAR 575
Query: 438 AFV 440
F+
Sbjct: 576 KFM 578
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/388 (19%), Positives = 156/388 (40%), Gaps = 31/388 (7%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+IR R +A+E+ + M+ KG C+ + + G+L E ++D
Sbjct: 318 MIRGYCDLHRVEEAIELLEDMHSKG-CLPDKVSYYT-------IMGYLCKEKRIVEVRDL 369
Query: 128 EKTYQ----------TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYS 177
K TY L++ + D+AL + +E G + L Y+ I+
Sbjct: 370 MKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALC 429
Query: 178 KTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDW 237
K G+ + D++ EM PD +Y +N + +++ + +L+ M + H +
Sbjct: 430 KEGRMSEAKDLINEMDCP---PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKP-NT 485
Query: 238 STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
+Y + + + +A +++ +EE + I Y+ ++ G SE + +
Sbjct: 486 VSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV--V 543
Query: 298 EKTACKRYINR--DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
+ K + + +L++L + G EA K ++E G + + VI G+C N
Sbjct: 544 REMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQN 603
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
+ A ++L+D+ K ++ + G+ + MK L KG P
Sbjct: 604 DELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLH-----KGIDP 658
Query: 416 DPKVITSILSKLGDEGSVQDVEAFVAAL 443
P +++ + G V D+ A + +
Sbjct: 659 TPVTYRTVIHRYCQMGKVDDLVAILEKM 686
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 118/317 (37%), Gaps = 49/317 (15%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT-------------------------- 190
MK GI + ++ +M YS+ GQ VLT
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 191 ---------EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
M+ I P+ +Y I Y +E +L +M S+ + D +Y
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKG-CLPDKVSYY 351
Query: 242 SAAHFYIKANLIDKASDVLKK-AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
+ + K I + D++KK A+E D + YN LI + + E LW L+
Sbjct: 352 TIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEA--LWFLKDA 409
Query: 301 ACK--RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
K R Y ++ AL K G EA+ ++ E + D AV+ G+C G V
Sbjct: 410 QEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCPP---DVVTYTAVVNGFCRLGEV 466
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
A+ +L+ + G S+ + G GK+ + M + E W P+
Sbjct: 467 DKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMS-----EEHWWSPNSI 521
Query: 419 VITSILSKLGDEGSVQD 435
+ I+ L EG + +
Sbjct: 522 TYSVIMHGLRREGKLSE 538
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 133/339 (39%), Gaps = 60/339 (17%)
Query: 68 IIRDLRKRKRFSQALEVSDWMN-----------RKGICVFAPCDHAVQLDLIGRVHGFLS 116
I+ L K R S+A ++ + M+ G C D A +L + HG
Sbjct: 424 IVHALCKEGRMSEAKDLINEMDCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH-- 481
Query: 117 AESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLY 176
+ +Y ALLN R ++ +A +E + +++TY+ IM
Sbjct: 482 -----------KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGL 530
Query: 177 SKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS-------YGARSDLE-----GMEIIL 224
+ G+ + DV+ EM K FP + + S + AR +E G I +
Sbjct: 531 RREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINV 590
Query: 225 -------------REMESQPHIVLDWSTYASAAHFYIKANLID---------KASDVLKK 262
E+++ ++ D A + L+D +A++++KK
Sbjct: 591 VNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKK 650
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGE 322
+ + Y +I Y +G +++ + LEK ++ Y ++E L LG+
Sbjct: 651 MLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAI--LEKMISRQKCRTIYNQVIEKLCVLGK 708
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
EEA+ +L + + + D + A++ GY G+ +A
Sbjct: 709 LEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSA 747
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 181/435 (41%), Gaps = 32/435 (7%)
Query: 65 LQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG--------RVHGFLS 116
L ++ +K R A EV M +G+ C +A+ DL+ +V F+
Sbjct: 50 LDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMV 109
Query: 117 AESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLY 176
+ + D TY T L+ Y + R+ D A +M+E G L+T+TYN ++
Sbjct: 110 G----AGISPDVYTYST---LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGL 162
Query: 177 SKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHI 233
++G E+ +M+ + PD F+Y IN + +L EM E +P++
Sbjct: 163 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV 222
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
V+ YA+ +++ D+A ++K+ Q + I Y+ L+ +G
Sbjct: 223 VV----YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASL 278
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
L R Y ++E + ++A ++L E E +G S + + +I G C
Sbjct: 279 LLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLC 338
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
+G + A +LE++ KG +A + +GY G + V V
Sbjct: 339 QSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV----- 393
Query: 414 KPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNG--KGVD 469
PD S++ L G V++ + A + R ++P N Y I ++NG + +
Sbjct: 394 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP-NEFTYSGLIHGYLKNGDLESAE 452
Query: 470 ELLDSMKADGIDEDE 484
+L+ M G+ ++
Sbjct: 453 QLVQRMLDTGLKPND 467
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 126/304 (41%), Gaps = 17/304 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y L++ Y R+ A F KM ++ + YN ++ SK G+ E+ +M
Sbjct: 364 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 423
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ + + P+ F+Y I+ Y DLE E +++ M +P+ V+ Y Y K
Sbjct: 424 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI----YIDLLESYFK 479
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTACKRYINR 308
++ I+K S K ++ D Y LI +S GN R L ++EK ++
Sbjct: 480 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHV 539
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y +++ L K + E+A +L E G + NA+I G C +G + A + +
Sbjct: 540 -YSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 598
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP---KVITSILS 425
+ KG ++ + G G F L+ G PD V+T+ S
Sbjct: 599 LAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT-----GITPDAFVYSVLTTGCS 653
Query: 426 KLGD 429
GD
Sbjct: 654 SAGD 657
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 123/300 (41%), Gaps = 26/300 (8%)
Query: 109 GRVHGFL------SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEM 160
G +HG+L SAE + D + Y LL Y + +K S F+ M +
Sbjct: 437 GLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQ 496
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGM 220
G+ L Y ++ S +G E VL+E++ PD Y I+ +D E
Sbjct: 497 GVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKA 556
Query: 221 EIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
IL EM + P+IV Y + K+ I A +V + + + Y
Sbjct: 557 FGILDEMSKKGVDPNIV----CYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 612
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWE 334
LI +G+ S L++ E A I D Y + G+ E+A +++E
Sbjct: 613 LIDGSCKVGDISNAFYLYN-EMLATG--ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 669
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV--VAAGYFDAGK 392
L G++ + N ++ G+C G +Q +L V G+ PN+ + + +G +AGK
Sbjct: 670 LRGHASISSF-NNLVDGFCKRGKMQETLKLLH--VIMGRGLVPNALTIENIISGLSEAGK 726
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 179/438 (40%), Gaps = 53/438 (12%)
Query: 62 VGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYF 121
V E R + + K+K++S + + + Q+DL G H S
Sbjct: 92 VVEFGRFLGSIAKKKQYSTVVSLCN-----------------QMDLFGVTHNVYS----- 129
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
L+NC R A+S KM ++GI +T+N ++ G+
Sbjct: 130 ------------LNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGE 177
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWS 238
++ + EM + PD SY IN + +LR+ME +P++V
Sbjct: 178 IKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLV---- 233
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
Y + K L++ A D+L + +R D + Y+ ++ + SLG+ +E L++ E
Sbjct: 234 AYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFN-E 292
Query: 299 KTACKRYINRDYITML-EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
N T+L + L K G EA V + G + NA++ GYC N
Sbjct: 293 MVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQ 352
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP 417
+ A+ +L+ +V+KG A +S+ ++ GY + + +L V + K PD
Sbjct: 353 MDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEA-----KSLLVEMSEKELTPDT 407
Query: 418 KVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLD 473
++++ L G Q+ + F + + + Y + ++G +DE LL
Sbjct: 408 VTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGH-LDEALKLLK 466
Query: 474 SMKADGIDEDEETKEILV 491
SM+ I+ D IL+
Sbjct: 467 SMQESKIEPDIVLYNILI 484
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 139/362 (38%), Gaps = 44/362 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y ++N + T AL RKM+E G + + Y I+ K D+L+EM
Sbjct: 199 SYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEM 258
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ I PD +Y ++ + + L I+ EM + +++ + T+ K +
Sbjct: 259 VDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR-NVMPNTVTFTILVDGLCKEGM 317
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ +A V + ++ + + YN L+ Y L N
Sbjct: 318 VSEARCVFEAMTKKGAEPNAYTYNALMDGYC-LNN------------------------- 351
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+ +EA+KVL G + N +I GYC + A+++L ++ EK
Sbjct: 352 ---------QMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKE 402
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
+++ + G G+ + K S G PD +++L L G
Sbjct: 403 LTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCS-----SGLLPDLMTYSTLLDGLCKHGH 457
Query: 433 VQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETKEI 489
+ + + +++ + I + +Y+ I+ GK EL + ADGI T I
Sbjct: 458 LDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTI 517
Query: 490 LV 491
++
Sbjct: 518 MI 519
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 1/247 (0%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K E TY AL++ Y Q D+A M + G A +YN ++ Y K + ++
Sbjct: 331 KGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDE 390
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
+L EM K + PD +Y + + + +EM S ++ D TY++
Sbjct: 391 AKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSS-GLLPDLMTYSTLL 449
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K +D+A +LK +E + D + YN LI G L+ +
Sbjct: 450 DGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQ 509
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
R Y M++ L+K G +EA ++ ++ E G ++ N +I G+ N A +
Sbjct: 510 PTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRL 569
Query: 365 LEDLVEK 371
++++V K
Sbjct: 570 IDEMVGK 576
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 153/365 (41%), Gaps = 15/365 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG L+N V+ + D+A ++M + G A + + YN ++ Y + G + +M
Sbjct: 269 TYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDM 328
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH-FYIKAN 251
+ I P++ + I Y + +E E +L EM + V++ T+ S H +K
Sbjct: 329 ISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGG-VINQGTFTSVIHRLCLKCR 387
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRD 309
+++ + DG+ L+S G +SE + LW LEK + +
Sbjct: 388 FDSALLFIMEMLLRNFKPNDGL-LTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSN 446
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
++ L + G EEA K+LKE G D+ N +I+ C G V+ + E++V
Sbjct: 447 --ALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMV 504
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+G ++ ++ G + GK E L + G PD ++
Sbjct: 505 RRGIQPDMYTYNMLLHGLCNMGKIEEA-----GGLWHECKKNGNFPDAYTYGIMIDGYCK 559
Query: 430 EGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEET 486
V++ E + T+ I N +Y I+A NG + L D M++ GI + T
Sbjct: 560 ANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSAT 619
Query: 487 KEILV 491
L+
Sbjct: 620 YSSLI 624
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 178/436 (40%), Gaps = 20/436 (4%)
Query: 7 LSTNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQ 66
+ST QI + + S N + +L N E L+ + G + G
Sbjct: 318 ISTALQIRDDMISNGISPNSVTCNSLIQGYCK-SNQMEHAEHLLEEMLTGGGVINQGTFT 376
Query: 67 RIIRDLRKRKRFSQALE-VSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK 125
+I L + RF AL + + + R F P D + L + G +E+ +
Sbjct: 377 SVIHRLCLKCRFDSALLFIMEMLLRN----FKPNDGLLTLLVSGLCQNGKQSEAIELWYR 432
Query: 126 DDEKTYQ----TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
EK + T AL++ ++A ++M E G+ L +++YN ++ K G+
Sbjct: 433 LLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGK 492
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
E+ + EM + I PD ++Y + ++ +E + E + + D TY
Sbjct: 493 VEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFP-DAYTYG 551
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
Y KAN +++ + ++ +++ + Y LI Y GN E RL D ++
Sbjct: 552 IMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSR 611
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
+ Y +++ L +G + A ++L E G S + A+I GYC G +
Sbjct: 612 GIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKV 671
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKV 419
++IL+++ ++ ++ G+ G MKAA + E KG PD
Sbjct: 672 DSILQEMSINNVHPNKITYTIMINGHCKLGN-------MKAAAKLLNEMAQKGIVPDAVT 724
Query: 420 ITSILSKLGDEGSVQD 435
++ + EG +++
Sbjct: 725 YNALTNGFCKEGKMEE 740
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 136/339 (40%), Gaps = 45/339 (13%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ ++N + + D A+ FRKM+++G+A + +TYN+I+ K G+ ++ +M+
Sbjct: 200 FSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKME 259
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH--------------------- 232
+ + P +Y + IN + IL+EM + +
Sbjct: 260 KERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNIS 319
Query: 233 -------------IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
I + T S Y K+N ++ A +L EE L I
Sbjct: 320 TALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLL---EEMLTGGGVINQGTFT 376
Query: 280 SLYASLGNKS--EVLRLWDLEKTACKRYINRDYITML-EALMKLGEHEEAEKVLKEWELS 336
S+ L K + L+ +E N +T+L L + G+ EA ++
Sbjct: 377 SVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEK 436
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G + +T NA+I G C G + A +L++++E+G S+ + GK E G
Sbjct: 437 GFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEG 496
Query: 397 FQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
F+ + + +G +PD +L L + G +++
Sbjct: 497 FKLKEEMVR-----RGIQPDMYTYNMLLHGLCNMGKIEE 530
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 1/189 (0%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E+ YG L+ Y +A M+ GI ++ TY+ ++ S G +
Sbjct: 579 EQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQ 638
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
+L EM+ + + P+ Y I Y + ++ IL+EM S ++ + TY + +
Sbjct: 639 LLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEM-SINNVHPNKITYTIMINGH 697
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
K + A+ +L + ++ D + YN L + + G E L++ DL T +
Sbjct: 698 CKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDD 757
Query: 308 RDYITMLEA 316
Y T+++
Sbjct: 758 ITYTTLIDG 766
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 8/280 (2%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E + Y L++ Y R ++ALS RKMKE GI +S +TY+ ++ ++KTG E
Sbjct: 343 EPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADH 402
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
E K K+ + Y I +Y R +++ E ++REME + I Y + Y
Sbjct: 403 WFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEG-IDAPIDIYHTMMDGY 461
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
DK V ++ +E I Y LI+LYA LG S+ L + + A ++
Sbjct: 462 TMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNM 521
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
+ Y ++ +KL + A + ++ G D + N +I +C G + A +++
Sbjct: 522 KTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKE 581
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
+ ++ T ++ + G+ G+ MK AL V+
Sbjct: 582 MQKQRHKPTTRTFMPIIHGFARKGE-------MKKALDVF 614
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 161/372 (43%), Gaps = 13/372 (3%)
Query: 119 SYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
S F +K + + YG ++N Y R+ +A F KM+ GI S+ Y +++ Y+
Sbjct: 301 SAFERIKKPSR--KEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAV 358
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
E+ + +MK + I +Y I ++ + + E + +E + + H L+
Sbjct: 359 GRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEK-HSSLNAI 417
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
Y + + Y + +DKA ++++ EE Y+ ++ Y +G++ + L +++
Sbjct: 418 IYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERF 477
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
K Y ++ KLG+ +A +V KE E +G ++ + + +I G+
Sbjct: 478 KECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDW 537
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
NA AI EDL++ G + + + GK +R +K ++ + KP +
Sbjct: 538 ANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKE-----MQKQRHKPTTR 592
Query: 419 VITSILSKLGDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANI--RNGKGVDELLDS 474
I+ +G ++ +R IP Y+A I + R + +++LD
Sbjct: 593 TFMPIIHGFARKGEMKKALDVFDMMRMSGCIP-TVHTYNALILGLVEKRKMEKAEQILDE 651
Query: 475 MKADGIDEDEET 486
M G+ +E T
Sbjct: 652 MTLAGVSPNEHT 663
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 21/227 (9%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGF-------LSAESY 120
II ++ +AL+V D M G C+ P H ++G V + E
Sbjct: 597 IIHGFARKGEMKKALDVFDMMRMSG-CI--PTVHTYNALILGLVEKRKMEKAEQILDEMT 653
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+ + +E TY T +++ Y T KA ++F K+++ G+ L TY ++ K+G
Sbjct: 654 LAGVSPNEHTYTT---IMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSG 710
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ + V EM A+NI + F Y I I+ + R D+ ++++M+ + + D TY
Sbjct: 711 RMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREG-VQPDIHTY 769
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN 287
S +I N KA D +++A + +E+ +G + Y +L N
Sbjct: 770 TS----FI--NACSKAGD-MQRATKTIEEMKSVGVKPNVKTYTTLIN 809
>gi|297746078|emb|CBI16134.3| unnamed protein product [Vitis vinifera]
Length = 453
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 151/341 (44%), Gaps = 21/341 (6%)
Query: 38 PLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFA 97
P G P + +W+ G + G + I LRK K +ALEV +W+ R+
Sbjct: 68 PRGEP---VGLAFQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRPK 124
Query: 98 PCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKM 157
D++ L+ ++HG E FS++ + + Y L+ + + +L++ +KM
Sbjct: 125 ELDYSYLLEFTTKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKM 184
Query: 158 KEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL 217
+E+G +S L +N ++ L+S + + +P +LT+MKA + +Y I + ++
Sbjct: 185 RELGHPISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNI 244
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
EG+ + EM+ Q + + +Y A + A L A ++ E+ + + +
Sbjct: 245 EGLVKVFGEMKQQ-QVEPNEVSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNNWSTLDV 303
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS- 336
LI LY LG ++ L L + K+ + + + E LK EL
Sbjct: 304 LIILYGYLGKPTD---LEPLVRNKVKKRVEINRAIQFNDICLFQTWE----ALKTLELGK 356
Query: 337 GNSYDTRIPN---------AVIIGYCNNGLVQNAEAILEDL 368
G + TRI +++ + NG V+NAE + E+L
Sbjct: 357 GLTISTRIRKSIPWLETTLSIVEIFSENGDVENAEKLFEEL 397
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 165/401 (41%), Gaps = 35/401 (8%)
Query: 42 PGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH 101
PG ++ LD G + E+ ++R + + + +AL+ +W+ R AP
Sbjct: 140 PGAPVDDVLD-----GARASPDEVAFVVRAVGESS-WRRALDAFEWLARSS----APASR 189
Query: 102 AVQ--LDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
AV L ++GR AE F + T Q + A++ Y R + D A M +
Sbjct: 190 AVAVVLGVLGRARQDSIAEEVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHD 249
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEK--VPDVLTEMKAKNIFPDNFSYRICINSYGARSDL 217
GI +++N ++ SK+G D+L E++ + PD +Y I++ S+L
Sbjct: 250 RGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNL 309
Query: 218 EGMEIILREM---ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
E + +M E +P D TY + + + ++A + ++ E+ D I
Sbjct: 310 EDAVTVFEDMIASECRP----DLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAIT 365
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
YN L+ +A GN +V + A + Y TM+ K+G + A + E
Sbjct: 366 YNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMR 425
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK-- 392
G + D +I + A +LED+ + G T +++ + Y G+
Sbjct: 426 AMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRA 485
Query: 393 -TERGFQCMKAALSVYVEGKGWKPDP---KVITSILSKLGD 429
E F CM A+ G KPD V+ + ++ GD
Sbjct: 486 DAENTFDCMIAS--------GVKPDRLAYLVMLDVFARSGD 518
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 158/394 (40%), Gaps = 62/394 (15%)
Query: 77 RFSQALEVSDWMNRKGI------------------CVFAPCDHAVQLDLIGRV------- 111
RF A ++ D M+ +GI C+ A V LDL+ V
Sbjct: 236 RFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAA----GVALDLLFEVRQSGLRP 291
Query: 112 -----HGFLSAESYFSNLKDDEKTYQ------------TYGALLNCYVRQRQTDKALSHF 154
+ +SA S SNL+D ++ TY A+++ + R + ++A F
Sbjct: 292 DVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLF 351
Query: 155 RKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG-- 212
R++ E G +TYN ++ ++K G +KV ++ + +Y I+ YG
Sbjct: 352 RELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKM 411
Query: 213 ARSDLE-GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
R DL G+ +R M P D TY K N I +A VL+ + +
Sbjct: 412 GRLDLAVGLYDEMRAMGCTP----DAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPT 467
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
I ++ LI YA G +++ +D + + Y+ ML+ + G+ E+ + +
Sbjct: 468 LIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYR 527
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+ D + +++ + E +++D+ + + +++ A
Sbjct: 528 KMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDM----ELLCRMNLGIISTMLIKAR 583
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+G + +K A +G+KPD K + SI++
Sbjct: 584 CVSQGAKLLKKACL-----QGYKPDIKSLRSIMN 612
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 163/429 (37%), Gaps = 49/429 (11%)
Query: 107 LIGRVHGFLSAESYFSN---LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
L+ R +SA +S LK + Y L+ C + +A F M+ +GI
Sbjct: 648 LLCRKQTSISAYEQYSQRLMLKYPGQNCNLYEYLITCLIEAEFFSEACQVFCDMQFIGIE 707
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR-ICINSYGARSDLEGMEI 222
S Y I+ Y K G E ++ + I + S R I I +YG + EI
Sbjct: 708 ASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEI 767
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK-------------------- 262
+++ + I D + + H Y ++ L +KA V
Sbjct: 768 LVKGLRQASGI--DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRAL 825
Query: 263 -AEERLEQ-----KDGIGYNF---------LISLYASLGNKSEVLRLWDLEKTACKRYIN 307
+ RL++ ++ NF L+ +A G+ EV+++++ K A
Sbjct: 826 IVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNM 885
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y +M+ L + E ++ E E +G D I NA++ Y G +
Sbjct: 886 HLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRS 945
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
++E G +++ + Y + + E GF + + +G P + S+L+
Sbjct: 946 ILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNE-----MGKRGLTPKLQSYKSLLAAS 1000
Query: 428 GDEGSVQDVEAFVAALRT-VIPMNRQMYHAFIKA--NIRNGKGVDELLDSMKADGIDEDE 484
+ + +R+ +NR +YH +K N N + LL MK DGI+
Sbjct: 1001 AKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTI 1060
Query: 485 ETKEILVCT 493
T IL+ +
Sbjct: 1061 ATMHILMTS 1069
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 7/232 (3%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
ALLN Y D+ +R + E G+ TYN ++ +Y ++ + E+ +L EM +
Sbjct: 925 ALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKR 984
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
+ P SY+ + + E + I EM S+ + L+ S Y Y A K
Sbjct: 985 GLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSY-QLNRSIYHMMMKIYRNAGNHSK 1043
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLE 315
A ++L +E + + L++ Y + G E + + K++ Y T+ +
Sbjct: 1044 AENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFD 1103
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI--IGYCNNGLVQNAEAIL 365
A +K G++ L E + G D ++ I C Q A+AIL
Sbjct: 1104 AYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCE----QTADAIL 1151
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 109/269 (40%), Gaps = 13/269 (4%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T + ++ + + D+ ++++M +S T ++ ++K G +V +
Sbjct: 814 TVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIY 873
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHF 246
MKA P+ YR I+ + +E+++ EME +P D + + +
Sbjct: 874 NGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKP----DLAILNALLNM 929
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y A D+ + V + E + D YN LI +Y E L + KR +
Sbjct: 930 YTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLN---EMGKRGL 986
Query: 307 N---RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ Y ++L A K E+A+++ +E + I + ++ Y N G AE
Sbjct: 987 TPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAEN 1046
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
+L + E G T + ++ Y AG+
Sbjct: 1047 LLAVMKEDGIEPTIATMHILMTSYGTAGQ 1075
>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g19290
gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 143/349 (40%), Gaps = 45/349 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+N Y + R M E G++ + +TY ++ Y K G E+ V +
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 193 KAKNIFPDNFSYRICINSY--------GARSDLEGMEIILR------------------- 225
K K + D Y + ++ Y R +EI +R
Sbjct: 323 KEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQL 382
Query: 226 -EMESQPHIVLDWS------TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
E E + DWS TY + Y +A +D+A + + ++ + YN L
Sbjct: 383 VEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNIL 442
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWEL 335
+ Y+ +G +VL LW K KR +N D I T+LEAL KLG+ EA K+ +
Sbjct: 443 LKGYSRIGAFHDVLSLW---KMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 499
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G DT N +I G C V A+ IL+++ ++ ++ GY+ G +
Sbjct: 500 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
F A+ Y+E KG P ++ +++S + V V LR
Sbjct: 560 AF-----AVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELR 603
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%)
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
V +M + + PD F+ I +N+Y +++ + +E ES + L+ TY S + Y
Sbjct: 212 VYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGY 271
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
++ + VL+ ER ++ + Y LI Y G E +++L K
Sbjct: 272 AMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQ 331
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y +++ + G+ +A +V G +T I N++I GYC +G + AE I
Sbjct: 332 HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSR 391
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ + +++ + GY AG + +
Sbjct: 392 MNDWSLKPDHHTYNTLVDGYCRAGYVDEALK 422
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 151/393 (38%), Gaps = 27/393 (6%)
Query: 114 FLSAESYFSNLKD--DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
+ AE FS + D + + TY L++ Y R D+AL +M + + + +TYN
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 441
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQ 230
++ YS+ G + V + M + + D S + + D E M+ L E
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMK--LWENVLA 499
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
++ D T K +++A ++L + Y L Y +GN E
Sbjct: 500 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Query: 291 VLRLWDLEKTACKRYINRD--------YITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
A K Y+ R Y T++ K + ++ E G +
Sbjct: 560 AF--------AVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTV 611
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA 402
A+I G+CN G++ A A +++EKG N + +A F K + ++
Sbjct: 612 ATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQK 671
Query: 403 ALSVYVEGKGWKPDPKVI-TSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKAN 461
+ + G++ + + S + L + + VE + ++P N +Y+ I
Sbjct: 672 IVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPK-KLLVP-NNIVYNVAIAGL 729
Query: 462 IRNGKGVDE---LLDSMKADGIDEDEETKEILV 491
+ GK D D + +D DE T IL+
Sbjct: 730 CKAGKLEDARKLFSDLLSSDRFIPDEYTYTILI 762
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF-PDNFSYRICINSYGARSDLEGMEII 223
+ + YN + K G+ E + +++ + + F PD ++Y I I+ D+
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINK-AFT 776
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
LR+ + I+ + TY + K +D+A +L K ++ + I YN LI
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 284 SLGNKSEVLRL 294
GN +E +RL
Sbjct: 837 KSGNVAEAMRL 847
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 111/288 (38%), Gaps = 44/288 (15%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
QTY AL + Y + +A + M+ GI + YN ++ K KV D++ E
Sbjct: 542 QTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIE 601
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
++A+ + P +Y I + ++ EM + I L+ + + A+ + +
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM-IEKGITLNVNICSKIANSLFRLD 660
Query: 252 LIDKASDVLKK--------------------------------------AEERLEQKDGI 273
ID+A +L+K ++L + I
Sbjct: 661 KIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNI 720
Query: 274 GYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI--TMLEALMKLGEHEEAEKVLK 331
YN I+ G + +L+ + + R+I +Y ++ G+ +A +
Sbjct: 721 VYNVAIAGLCKAGKLEDARKLFS-DLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRD 779
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
E L G + NA+I G C G V A+ +L L +KG TPN+
Sbjct: 780 EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKG--ITPNA 825
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 185/410 (45%), Gaps = 36/410 (8%)
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
GIC D ++ LDL+ ++ N+K D TY T +++ R D A+
Sbjct: 202 GICRSG--DTSLALDLLRKMEE--------RNVKADVFTYST---IIDSLCRDGCIDAAI 248
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
S F++M+ GI S +TYN ++ K G++ +L +M ++ I P+ ++ + ++ +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 212 GARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
L+ + +EM ++ P+I+ TY + Y N + +A+++L
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNII----TYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEE 325
D + + LI Y + + ++++ + KR + + +T +++ + G+ +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVF---RNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
AE++ +E G D ++ G C+NG ++ A I EDL + + +
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
G GK E + L + KG KP+ T ++S L +GS+ + + +
Sbjct: 482 GMCKGGKVEDAWN-----LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 446 --VIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
P N Y+ I+A++R+G +L++ MK+ G D + ++++
Sbjct: 537 DGNAP-NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 153/370 (41%), Gaps = 15/370 (4%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E T+ L+ + + +A+ +M E G +TYN I+ ++G D
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
+L +M+ +N+ D F+Y I+S ++ + +EME++ I TY S
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLVRGL 273
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
KA + + +LK R + I +N L+ ++ G E L+ K R I+
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY---KEMITRGIS 330
Query: 308 RDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+ I T+++ EA +L + S D ++I GYC V + +
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
++ ++G +++++ G+ +GK + + + +S G PD +L
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS-----HGVLPDVMTYGILL 445
Query: 425 SKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGID 481
L D G ++ +E F ++ + + MY I+ + GK D L S+ G+
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 482 EDEETKEILV 491
+ T +++
Sbjct: 506 PNVMTYTVMI 515
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 178/425 (41%), Gaps = 18/425 (4%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L F A E+ MNR+G C +P + V +D + A + +D
Sbjct: 51 LIHGLCMANSFDDARELFADMNRRG-CPPSPVTYNVIIDASCKRGMLEEACDLIKKMIED 109
Query: 128 EKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
TY +++ + + ++AL F +M+ +G + ++N I+ + + ++
Sbjct: 110 GHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 169
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAA 244
V EM+A++I PD++SY I I+ L E ++ R ++S I TY
Sbjct: 170 CQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSG--ITPSAVTYNVVI 227
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
H A +D+A ++ K + + +N LI + G E RL L++
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRL--LKRMTDDG 285
Query: 305 YINR--DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
++ Y T++ L + ++A +L++ N +I G C G ++ A
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 345
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
+L+ +V G++ ++ + G+ AG+TER + + ++ +G P+ T+
Sbjct: 346 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA-----RGLAPNVVTYTA 400
Query: 423 ILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADG 479
++S L + + A +++ N Y A I G+ G +L M G
Sbjct: 401 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 460
Query: 480 IDEDE 484
I D
Sbjct: 461 ISPDH 465
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 143/345 (41%), Gaps = 22/345 (6%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCD---HAVQLDLIGRVHGFLSAESYFSNL 124
II L ++ + QA +V M + I P D + + +D + + A F +
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEARDI----PPDSWSYGILIDGLAKAGKLNEAYKLFRRM 211
Query: 125 KDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
D T TY +++ D+AL F+ M+ G S T+N ++ + K G+
Sbjct: 212 LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKM 271
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWST 239
++ +L M PD +Y I+ + + ++ +L +M + +P +V T
Sbjct: 272 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV----T 327
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
+ H KA I +A +VL + D + YN L+ + G R +L
Sbjct: 328 QNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE---RARELLS 384
Query: 300 TACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
R + + +T ++ L K EA V + + SG + + A+I+G+C+ G
Sbjct: 385 DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAG 444
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
V + ++V G + + +AA +G++ R + ++
Sbjct: 445 QVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 489
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 152/369 (41%), Gaps = 23/369 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+YG L++ + + + A F+K+ G+ ST+ Y ++ ++ ++ +M
Sbjct: 12 SYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P +Y + I++ R LE ++++M H V D TY + K+
Sbjct: 72 NRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGH-VPDVVTYNTVMDGLCKSGR 130
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
+++A + + E + +N +I L +S++ + + R I D
Sbjct: 131 VEEALLLFNEMERLGCTPNRRSHNTII---LGLCQQSKIDQACQVFHEMEARDIPPDSWS 187
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ L K G+ EA K+ + SG + N VI G C + A + + +
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
KG + ++ ++ + GK + F+ +K + G PD ++++S L
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLK-----RMTDDGHVPDVVTYSTLISGLCS 302
Query: 430 EGSVQDVEAFVAAL------RTVIPMNRQMYHAFIKAN-IRNGKGVDELLDSMKADGIDE 482
V D + + TV+ N + H KA I+ + E+LD+M + G
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQN-TLIHGLCKAGRIKEAR---EVLDAMVSSGQSP 358
Query: 483 DEETKEILV 491
D T LV
Sbjct: 359 DVVTYNTLV 367
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 119/307 (38%), Gaps = 17/307 (5%)
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M +N+ PD++SY I I+ L + +++ + Y S H AN
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKL-LHSGVTPSTVAYTSLIHGLCMAN 59
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRD 309
D A ++ R + YN +I G E L +E +
Sbjct: 60 SFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVT-- 117
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+++ L K G EEA + E E G + + R N +I+G C + A + ++
Sbjct: 118 YNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM- 176
Query: 370 EKGKATTPNSWA--VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ + P+SW+ ++ G AGK ++ + L + + + L+
Sbjct: 177 -EARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYT 235
Query: 428 GDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDE 484
DE +E F + +R ++ I A+ + GK +DE LL M DG D
Sbjct: 236 LDEA----LELFKSMRSKGCRPSRFTFNILIDAHCKRGK-MDEAFRLLKRMTDDGHVPDV 290
Query: 485 ETKEILV 491
T L+
Sbjct: 291 VTYSTLI 297
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 95/245 (38%), Gaps = 37/245 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ + R QT++A M G+A + +TY ++ K + + V +M
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K+ P+ F+Y I + + ++G + EM I D Y + A K+
Sbjct: 422 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCA-GISPDHVVYGTLAAELCKSGR 480
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+A ++L++ E L +SE W E Y
Sbjct: 481 SARALEILREGRESL--------------------RSEA---WGDEV----------YRF 507
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE---DLV 369
++ L+ G+ E A +++ G +++ G C +G A A+LE DL
Sbjct: 508 AVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLA 567
Query: 370 EKGKA 374
GKA
Sbjct: 568 YGGKA 572
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 149/352 (42%), Gaps = 9/352 (2%)
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
R Q +L F+KM E + ++ + ++ K G+ E+ D++ EM K I P+
Sbjct: 192 RSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVV 251
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
+Y +N+Y D EG+ +LR ME +V + +TY +Y + I +A V +K
Sbjct: 252 TYNTLVNAYIKIMDFEGVNEMLRLME-MDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEK 310
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGE 322
ER + D + +IS LGN L+D Y ++ G+
Sbjct: 311 MLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQ 370
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
+ AE ++ E + G + I N +I GYC G++ A + + + +KG ++
Sbjct: 371 LDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNT 430
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE-AFVA 441
+A G + E K L VE KG P+ T ++ EG++ + E F
Sbjct: 431 IAGGLCKLNRHEEA----KRWLFTMVE-KGVDPNAVSFTIMIDIHCKEGNLVEAERVFQD 485
Query: 442 ALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
+ N Y+ I + GK + L D M++ G+ D T LV
Sbjct: 486 MKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLV 537
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 168/408 (41%), Gaps = 50/408 (12%)
Query: 60 VRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSA 117
V V + +I L K+ R +A ++ M KGI P + ++ ++ F
Sbjct: 213 VTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGI---KPNVVTYNTLVNAYIKIMDFEGV 269
Query: 118 ESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCL 175
++ D+ Y TY L+ Y + +A F KM E G+ + I+
Sbjct: 270 NEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISW 329
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVL 235
K G ++ + E+ + + + +Y I+ L+ E+++ EM+SQ + +
Sbjct: 330 QCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQG-LDM 388
Query: 236 DWSTYASAAHFYIKANLIDKA---SDVLKK------------------------------ 262
+ + + + Y K +ID+A DV++K
Sbjct: 389 NLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWL 448
Query: 263 --AEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMK 319
E+ + + + +I ++ GN E R++ D++K K + Y T+++ K
Sbjct: 449 FTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNV-VTYNTLIDGYSK 507
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
G+ +EA ++ E E G + D ++ G C G V+ A +L ++ KG A + +
Sbjct: 508 KGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVT 567
Query: 380 WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ + +G G++E F+ ++ G PD +V TS+++ L
Sbjct: 568 YTAIISGLSKEGRSEEAFRLYDEMMAA-----GLTPDDRVYTSLVANL 610
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 157/373 (42%), Gaps = 21/373 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N Y++ + R M+ + + TY ++ Y +G+ + V +M
Sbjct: 252 TYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKM 311
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + D + I+ +++ + E+ ++ +V + TY + H +
Sbjct: 312 LERGVEADIHVFTSIISWQCKLGNMKRAFALFDEL-NERGLVANAHTYGALIHGTCNSGQ 370
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYI 311
+D A ++ + + + + + +N LI+ Y G E LR+ D +EK + I Y
Sbjct: 371 LDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDI-FTYN 429
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV-----IIGYCNNGLVQNAEAILE 366
T+ L KL HEEA++ L + + D PNAV I +C G + AE + +
Sbjct: 430 TIAGGLCKLNRHEEAKRWL--FTMVEKGVD---PNAVSFTIMIDIHCKEGNLVEAERVFQ 484
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
D+ +KG+ ++ + GY GK + ++ L +E G D T+++
Sbjct: 485 DMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYR-----LKDEMESIGMTSDIYTYTTLVHG 539
Query: 427 LGDEGSVQDVEAFV-AALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDED 483
G V++ + R + ++ Y A I + G+ + L D M A G+ D
Sbjct: 540 ECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPD 599
Query: 484 EETKEILVCTMEK 496
+ LV + K
Sbjct: 600 DRVYTSLVANLHK 612
>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
Length = 526
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 153/390 (39%), Gaps = 57/390 (14%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL C+ + T + +++F K K+ G+ L + YN M Y K G + +L EMK
Sbjct: 76 LLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGG 135
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ PD Y IN Y + +++ + + EM + +I D TY A + K+ L+ +
Sbjct: 136 LTPDKIHYTCLINGYCLKGEMQNAQQVFEEM-LKANIEPDIVTYNILASGFCKSGLVMEV 194
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
D+L + + + + + Y I + GN SE L+++ + +I Y +M+
Sbjct: 195 FDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCG 254
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYD-----------TRIPNA------------------ 347
+ G + A + GN D R+ N
Sbjct: 255 YLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPD 314
Query: 348 ------VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+I YC NG + A D+V++G + + ++ GY AG+ + Q
Sbjct: 315 VISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQ--- 371
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKAN 461
L V + G KPD T +L E Q E R+ + ++AN
Sbjct: 372 --LFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFL----------LRAN 419
Query: 462 IRNGKGVDELLDSMKADGIDEDEETKEILV 491
++LL SMK I+ D +L+
Sbjct: 420 ------HNKLLSSMKDMQIEPDVPCYTVLI 443
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 100/251 (39%), Gaps = 55/251 (21%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y L++ Y + DKA F M + G+++ + Y +M Y K G+ ++ + +M
Sbjct: 317 SYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQM 376
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
I PD +Y + ++ + + +G E I +E S F ++AN
Sbjct: 377 TNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRS----------------FLLRAN- 419
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ +L ++ + D Y LI CK +Y+
Sbjct: 420 ---HNKLLSSMKDMQIEPDVPCYTVLID-------------------GKCK----AEYLV 453
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
EA ++ E G + D A+I GYC+ G + AE +L+++++KG
Sbjct: 454 ------------EARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKG 501
Query: 373 KATTPNSWAVV 383
+++V+
Sbjct: 502 IEPDELTFSVL 512
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 118/302 (39%), Gaps = 26/302 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG + + R +A F ++E GI + Y+ ++C Y +G + + +
Sbjct: 212 TYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRV 271
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ D+FS IN +++G + + M + ++V D +Y+ Y +
Sbjct: 272 ARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIM-LEHNVVPDVISYSKLISIYCQNGD 330
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+DKA +R D I Y L++ Y G E +L+ + Y
Sbjct: 331 MDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 390
Query: 313 MLEALMKLGEHEEAEKVLKE---WELSGNSY-------------DTRIPNAVIIGYCNNG 356
+L+ +K + E + KE + L N D +I G C
Sbjct: 391 LLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAE 450
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAA--GYFDAGKTERGFQCMKAALSVYVEGKGWK 414
+ A + +++++KG TP+++A A GY G+ + ++ + KG +
Sbjct: 451 YLVEARELFDEMLQKG--LTPDAYAYTALINGYCSQGEISKAEDLLQEMID-----KGIE 503
Query: 415 PD 416
PD
Sbjct: 504 PD 505
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 96/247 (38%), Gaps = 16/247 (6%)
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YI 311
+D+A +L+ + D GY++LI Y +GN +++ D + I + +I
Sbjct: 16 LDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGN---LIKAVDHYEAMVSHGIETNCHI 72
Query: 312 T--MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+L+ KLG E +++ SG D I N + YC NG + A +L ++
Sbjct: 73 VSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMK 132
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G + + GY G+ + Q + L +E PD + S
Sbjct: 133 CGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIE-----PDIVTYNILASGFCK 187
Query: 430 EGSVQDVEAFV--AALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEE 485
G V +V + A + P N Y I R G + L + ++ GID E
Sbjct: 188 SGLVMEVFDLLDRMADHGLEP-NSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEV 246
Query: 486 TKEILVC 492
+VC
Sbjct: 247 MYSSMVC 253
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 150/344 (43%), Gaps = 16/344 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL++ + + D+A++ M E G A + +TYN I+ + + + ++ + +M
Sbjct: 111 TYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQM 170
Query: 193 KAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
A+ PD +Y I + D+ G+E +L E+ ++ D TY++ KA
Sbjct: 171 VAEGCHPDIITYTALIGGFCKSRDVGRGLE-LLGEV-TRRGFTPDIVTYSTVIDGLCKAG 228
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDY 310
+ A D+ EE I YN LI Y G+ E +RL + C + Y
Sbjct: 229 RLRDAVDIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVV-TY 284
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T++ A K+G ++A ++ ++ + S D +++ G C G +++A +LE++
Sbjct: 285 TTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR 344
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+G T ++ V GY A + + + L +G+ P+ +++
Sbjct: 345 RGCPPTIYTYNCVVDGYCKANQVRKAEE-----LVADFRSRGFVPNTVTYNILVAGCCRA 399
Query: 431 GSVQDVEAFVAALRT---VIPMNRQMYHAFIKANIRNGKGVDEL 471
G ++ L + P + MY + A R+G+ D +
Sbjct: 400 GRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAV 443
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 130/313 (41%), Gaps = 13/313 (4%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY +++ + R R+ D+A +M G +TY ++ + K+ + ++L
Sbjct: 143 TVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELL 202
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
E+ + PD +Y I+ L I EM P + TY S Y +
Sbjct: 203 GEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAI----TYNSLIGGYCR 258
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A +D+A +L K + D + Y L+S + +G + ++L + ++ D
Sbjct: 259 AGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDA---YELFQQMVANKLSPD 315
Query: 310 YIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+T +++ L G E+A ++L+E G N V+ GYC V+ AE ++
Sbjct: 316 VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVA 375
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
D +G ++ ++ AG AG+T++ Q + S EG + IL
Sbjct: 376 DFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNS---EGGPCPTSVAMYAIILDA 432
Query: 427 LGDEGSVQDVEAF 439
L +G D F
Sbjct: 433 LCRDGRTDDAVQF 445
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 140/361 (38%), Gaps = 50/361 (13%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDL 107
++ V G + +I K + + LE+ + R+G F P ++ +D
Sbjct: 167 MEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRG---FTPDIVTYSTVIDG 223
Query: 108 IGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
+ + A F + T TY +L+ Y R D+A+ KM + A +
Sbjct: 224 LCKAGRLRDAVDIFEEMSC-APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVV 282
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
TY +M + K G+ + ++ +M A + PD ++ ++ +E +L E+
Sbjct: 283 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 342
Query: 228 ESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
+ P I TY Y KAN + KA +++ R + + YN L++
Sbjct: 343 TRRGCPPTIY----TYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCR 398
Query: 285 LGNKSEVLRLWDL---EKTAC---------------------------KRYINRDYI--- 311
G + L+ D E C + I R Y+
Sbjct: 399 AGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAA 458
Query: 312 ----TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
T++ AL K + ++A ++L+E G++ +AV+ YC G++Q A+ + +
Sbjct: 459 ATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASE 518
Query: 368 L 368
L
Sbjct: 519 L 519
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 145/384 (37%), Gaps = 56/384 (14%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
AL +R+M + LTY ++ SK + VL EM + PDN + + +
Sbjct: 24 ALGVYRQMNDAHPP-DFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQ 82
Query: 210 S--YGARSD------------------------LEGM--------EIILREMESQPHIVL 235
S G R D ++G+ + L E ++
Sbjct: 83 SLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAP 142
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
TY S + +A +D+A +++ D I Y LI + +V R
Sbjct: 143 TVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFC---KSRDVGRGL 199
Query: 296 DLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
+L +R D Y T+++ L K G +A + +E + + N++I GY
Sbjct: 200 ELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITY---NSLIGGY 256
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
C G + A +L +V+ A ++ + + + G+ + ++ + ++
Sbjct: 257 CRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVA-----NK 311
Query: 413 WKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHA----FIKANIRNGKG 467
PD TS++ L EG ++D +E R P Y+ + KAN +
Sbjct: 312 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKAN--QVRK 369
Query: 468 VDELLDSMKADGIDEDEETKEILV 491
+EL+ ++ G + T ILV
Sbjct: 370 AEELVADFRSRGFVPNTVTYNILV 393
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 167/392 (42%), Gaps = 38/392 (9%)
Query: 61 RVGELQRIIRDLRKR-----KRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFL 115
RV I+R++R+R +++ +S W C D AV++ G +
Sbjct: 87 RVQAALDIMREMRERGGIAPNQYTYGTVISGW------CKVGRVDEAVKVFDEMLTKGEV 140
Query: 116 SAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCL 175
E+ Y AL+ Y Q + D AL + +M E G+A++ TYN ++
Sbjct: 141 KPEAVM------------YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 188
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVL 235
G+ + +++ EM K + PD F+Y I IN + +++ I M S+ +
Sbjct: 189 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM-SRRGVRA 247
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
TY S + K + + + +A R + D + YN LI+ +++ GN +
Sbjct: 248 TVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 307
Query: 296 -DLEKTACKRYINRD--YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
++EK KR D Y T++ L LG +EA K++ E G D N +I GY
Sbjct: 308 GEMEK---KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 364
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
G V++A I +++ KG T ++ + G G+ + +K + G
Sbjct: 365 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE-----NG 419
Query: 413 WKPDPKVITSILSKLG--DEGSVQDVEAFVAA 442
PD S++ L DE ++ D E AA
Sbjct: 420 ITPDDSTYISLIEGLTTEDERAIDD-ERLAAA 450
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 142/347 (40%), Gaps = 15/347 (4%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A + F M + + L T T+N ++ G+ + ++L +M P+ +Y I
Sbjct: 25 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
+ +R ++ I+REM + I + TY + + K +D+A V + + E
Sbjct: 81 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140
Query: 270 K-DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
K + + YN LI Y G L D Y ++ AL G EA +
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+++E G + D N +I G+C G V+ A I E++ +G T ++ +
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVI 447
G+ + + A+ +G +PD + ++++ G++ + + + I
Sbjct: 261 KKGQVQETDKLFDEAVR-----RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 315
Query: 448 PMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETKEILV 491
+ Y+ ++ G+ VDE L+D M GI D T L+
Sbjct: 316 APDDVTYNTLMRGLCLLGR-VDEARKLIDEMTKRGIQPDLVTYNTLI 361
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 120/295 (40%), Gaps = 43/295 (14%)
Query: 51 DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGR 110
D V+ G + V ++ L R ++A E+ + M KG+ AP + + G
Sbjct: 168 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL---APDVFTYNILINGH 224
Query: 111 VH--GFLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
A F N+ + T TY +L+ ++ Q + F + GI
Sbjct: 225 CKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDL 284
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
+ YN ++ +S +G ++ +++ EM+ K I PD+ +Y + G+ ++ R
Sbjct: 285 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL---------MRGLCLLGR- 334
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
+D+A ++ + +R Q D + YN LIS Y+ G
Sbjct: 335 --------------------------VDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG 368
Query: 287 NKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+ + LR+ + Y +++ L K G+ ++AE ++KE +G + D
Sbjct: 369 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 423
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 185/410 (45%), Gaps = 36/410 (8%)
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
GIC D ++ LDL+ ++ N+K D TY T +++ R D A+
Sbjct: 202 GICRSG--DTSLALDLLRKMEE--------RNVKADVFTYST---IIDSLCRDGCIDAAI 248
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
S F++M+ GI S +TYN ++ K G++ +L +M ++ I P+ ++ + ++ +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 212 GARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
L+ + +EM ++ P+I+ TY + Y N + +A+++L
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNII----TYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEE 325
D + + LI Y + + ++++ + KR + + +T +++ + G+ +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVF---RNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
AE++ +E G D ++ G C+NG ++ A I EDL + + +
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
G GK E + L + KG KP+ T ++S L +GS+ + + +
Sbjct: 482 GMCKGGKVEDAWN-----LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 446 --VIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
P N Y+ I+A++R+G +L++ MK+ G D + ++++
Sbjct: 537 DGNAP-NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 89/446 (19%), Positives = 174/446 (39%), Gaps = 38/446 (8%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGI------------CVFAPCDHAVQLDLIGRV 111
+ R + + K+F+ L+ + GI C C ++G+V
Sbjct: 90 DFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKV 149
Query: 112 HGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
Y E T+ L+ + + +A+ +M E G +TYN
Sbjct: 150 MKL----GY-------EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNS 198
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP 231
I+ ++G D+L +M+ +N+ D F+Y I+S ++ + +EME++
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK- 257
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
I TY S KA + + +LK R + I +N L+ ++ G E
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 292 LRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
L+ K R I+ + I T+++ EA +L + S D ++
Sbjct: 318 NELY---KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 349 IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYV 408
I GYC V + + ++ ++G +++++ G+ +GK + + + +S
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS--- 431
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKG 467
G PD +L L D G ++ +E F ++ + + MY I+ + GK
Sbjct: 432 --HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 468 VD--ELLDSMKADGIDEDEETKEILV 491
D L S+ G+ + T +++
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMI 515
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 185/410 (45%), Gaps = 36/410 (8%)
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
GIC D ++ LDL+ ++ N+K D TY T +++ R D A+
Sbjct: 192 GICRSG--DTSLALDLLRKMEE--------RNVKADVFTYST---IIDSLCRDGCIDAAI 238
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
S F++M+ GI S +TYN ++ K G++ +L +M ++ I P+ ++ + ++ +
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298
Query: 212 GARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
L+ + +EM ++ P+I+ TY + Y N + +A+++L
Sbjct: 299 VKEGKLQEANELYKEMITRGISPNII----TYNTLMDGYCMQNRLSEANNMLDLMVRNKC 354
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEE 325
D + + LI Y + + ++++ + KR + + +T +++ + G+ +
Sbjct: 355 SPDIVTFTSLIKGYCMVKRVDDGMKVF---RNISKRGLVANAVTYSILVQGFCQSGKIKL 411
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
AE++ +E G D ++ G C+NG ++ A I EDL + + +
Sbjct: 412 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 471
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
G GK E + L + KG KP+ T ++S L +GS+ + + +
Sbjct: 472 GMCKGGKVEDAWN-----LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 526
Query: 446 --VIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
P N Y+ I+A++R+G +L++ MK+ G D + ++++
Sbjct: 527 DGNAP-NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 575
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 153/370 (41%), Gaps = 15/370 (4%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E T+ L+ + + +A+ +M E G +TYN I+ ++G D
Sbjct: 145 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 204
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
+L +M+ +N+ D F+Y I+S ++ + +EME++ I TY S
Sbjct: 205 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLVRGL 263
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
KA + + +LK R + I +N L+ ++ G E L+ K R I+
Sbjct: 264 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY---KEMITRGIS 320
Query: 308 RDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+ I T+++ EA +L + S D ++I GYC V + +
Sbjct: 321 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 380
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
++ ++G +++++ G+ +GK + + + +S G PD +L
Sbjct: 381 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS-----HGVLPDVMTYGILL 435
Query: 425 SKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGID 481
L D G ++ +E F ++ + + MY I+ + GK D L S+ G+
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 495
Query: 482 EDEETKEILV 491
+ T +++
Sbjct: 496 PNVMTYTVMI 505
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 171/402 (42%), Gaps = 44/402 (10%)
Query: 22 YYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQA 81
Y + I +T+ + + +G+ I+ L + G K V II L K K ++A
Sbjct: 78 YEPDVITYSTIINGLCKMGSTTMAIQL-LKKMEEKGCKPNVVVYSTIIDSLCKDKLITEA 136
Query: 82 LE-VSDWMNR-------------KGICVFAPCDHAVQL--------------------DL 107
+E +S+ +NR G C + A L D
Sbjct: 137 MEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDG 196
Query: 108 IGRVHGFLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
+ + L A+ F + K E TY AL++ Y Q Q D+A F M G A S
Sbjct: 197 LSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPS 256
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
+YN ++ + K+G+ ++ +L EM K + PD +Y + + + + +L
Sbjct: 257 VRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLE 316
Query: 226 EMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
EM S ++ D TY+ K +D+A ++LK +E + + Y LI +
Sbjct: 317 EMRSYG-LLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNF 375
Query: 286 GNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
G K E R +L + I D +T M+ L+K G EA ++ ++ + G ++
Sbjct: 376 G-KLEAAR--ELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNS 432
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
N +I G+ NG NA ++E++V +G + +++ +++
Sbjct: 433 CTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLS 474
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 165/393 (41%), Gaps = 38/393 (9%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++N + T A+ +KM+E G + + Y+ I+ K + + L+EM
Sbjct: 84 TYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEM 143
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ I P+ +Y ++ + + ++M + +++ D T+ K +
Sbjct: 144 VNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVER-NVMPDTVTFNILVDGLSKEGM 202
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYI 311
I +A V + E+ + + YN L+ Y S E +L++ + + C + R Y
Sbjct: 203 ILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSV-RSYN 261
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+++ K G +EA+ +L E + DT + ++ G+C +G Q+A+ +LE++
Sbjct: 262 ILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSY 321
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAA-----------LSVYVEG---------- 410
G ++++V G G + F+ +KA ++ ++G
Sbjct: 322 GLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAA 381
Query: 411 ---------KGWKPDPKVITSILSKLGDEG-SVQDVEAFV-AALRTVIPMNRQMYHAFIK 459
KG +PD T ++S L G S + E F A+ +P N Y+ I+
Sbjct: 382 RELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLP-NSCTYNVIIQ 440
Query: 460 ANIRNG--KGVDELLDSMKADGIDEDEETKEIL 490
+RNG L++ M G D T ++L
Sbjct: 441 GFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 158/371 (42%), Gaps = 12/371 (3%)
Query: 28 NKTTLYSIISPLGNPGTRIEPE--LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVS 85
N T ++++ L + I+ D VK G + V II L K + A+++
Sbjct: 46 NHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLL 105
Query: 86 DWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--KDDEKTYQTYGALLNCYVR 143
M KG C ++ +D + + A + S + + TY ++L+ +
Sbjct: 106 KKMEEKG-CKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCN 164
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
++++A S F++M E + T+T+N ++ SK G + V M K + P+ +
Sbjct: 165 LGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNT 224
Query: 204 YRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVL 260
Y ++ Y ++S ++ + + M + P + +Y + K+ ID+A +L
Sbjct: 225 YNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSV----RSYNILIKGHCKSGRIDEAKGLL 280
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKL 320
+ + D + Y+ L+ + G + +L + ++ Y +L+ L K
Sbjct: 281 AEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQ 340
Query: 321 GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
G +EA ++LK + S + I +I G CN G ++ A + +L KG ++
Sbjct: 341 GHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTY 400
Query: 381 AVVAAGYFDAG 391
V+ +G G
Sbjct: 401 TVMISGLLKGG 411
>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
Length = 595
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 131/323 (40%), Gaps = 41/323 (12%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL C+ + T + +++F K K+ G+ L + YN M Y K G + +L EMK
Sbjct: 76 LLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGG 135
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ PD Y IN Y + +++ + + EM + +I D TY A + K+ L+ +
Sbjct: 136 LTPDKIHYTCLINGYCLKGEMQNAQQVFEEM-LKANIEPDIVTYNILASGFCKSGLVMEV 194
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
D+L + ++ + + + Y I + GN SE L+++ + +I Y +M+
Sbjct: 195 FDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCG 254
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYD-----------TRIPNA------------------ 347
+ G + A + GN D R+ N
Sbjct: 255 YLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPD 314
Query: 348 ------VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+I YC NG + A D+V++G + + ++ GY AG+ + Q
Sbjct: 315 VISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQ--- 371
Query: 402 AALSVYVEGKGWKPDPKVITSIL 424
L V + G KPD T +L
Sbjct: 372 --LFVQMTNLGIKPDVIAYTVLL 392
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 20/217 (9%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y L++ Y + DKA F M + G+++ + Y +M Y K G+ ++ + +M
Sbjct: 317 SYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQM 376
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---------------QPHIVLDW 237
I PD +Y + ++ + + +G E I +E S I D
Sbjct: 377 TNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDV 436
Query: 238 STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
Y KA + +A ++ + ++ D Y LI+ Y S G E+ + DL
Sbjct: 437 PCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG---EISKAEDL 493
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
+ + I D +T E + + + E + K+ KE E
Sbjct: 494 LQEMIDKGIEPDELTFSE--VNIADEELSVKIRKENE 528
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 120/309 (38%), Gaps = 26/309 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG + + R +A F ++E GI + Y+ ++C Y +G + + +
Sbjct: 212 TYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRV 271
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ D+FS IN +++G + + M + ++V D +Y+ Y +
Sbjct: 272 ARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIM-LEHNVVPDVISYSKLISIYCQNGD 330
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+DKA +R D I Y L++ Y G E +L+ + Y
Sbjct: 331 MDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 390
Query: 313 MLEALMKLGEHEEAEKVLKE---WELSGNSY-------------DTRIPNAVIIGYCNNG 356
+L+ +K + E + KE + L N D +I G C
Sbjct: 391 LLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAE 450
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAA--GYFDAGKTERGFQCMKAALSVYVEGKGWK 414
+ A + +++++KG TP+++A A GY G+ + ++ + KG +
Sbjct: 451 YLVEARELFDEMLQKG--LTPDAYAYTALINGYCSQGEISKAEDLLQEMID-----KGIE 503
Query: 415 PDPKVITSI 423
PD + +
Sbjct: 504 PDELTFSEV 512
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 97/247 (39%), Gaps = 16/247 (6%)
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YI 311
+D+A +L+ + D GY++LI Y +GN +++ D + I + +I
Sbjct: 16 LDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGN---LIKAVDHYEAMVSHGIETNCHI 72
Query: 312 T--MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+L+ KLG E +++ SG D I N + YC NG + A +L ++
Sbjct: 73 VSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMK 132
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G + + GY G+ + Q + L +E PD + S
Sbjct: 133 CGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIE-----PDIVTYNILASGFCK 187
Query: 430 EGSVQDVEAFV--AALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEE 485
G V +V + A + + P N Y I R G + L + ++ GID E
Sbjct: 188 SGLVMEVFDLLDRMADQGLEP-NSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEV 246
Query: 486 TKEILVC 492
+VC
Sbjct: 247 MYSSMVC 253
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 182/430 (42%), Gaps = 32/430 (7%)
Query: 77 RFSQALEVSDWMNRKGICVFAPCDHAVQ-----LDLIGRVHGFLSAESYFSNLKDDEKTY 131
+F + E + +NR I FAP D L IGRV +A+ F + E
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD---AAKDLFYRIPKPEIV- 354
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKM-KEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+ L++ +V + D A + M GI TYN ++ Y K G +VL
Sbjct: 355 -IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFY 247
+M+ K P+ +SY I ++ + ++ +L EM + +P+ V ++ SA +
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV-GFNCLISA---F 469
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTACKRYI 306
K + I +A ++ ++ + + D +N LIS L E+ LW L + +
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS---GLCEVDEIKHALWLLRDMISEGVV 526
Query: 307 NR--DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y T++ A ++ GE +EA K++ E G+ D N++I G C G V A ++
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
E ++ G A + S ++ G +G E + K + +G PD S++
Sbjct: 587 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL-----RGSTPDIVTFNSLI 641
Query: 425 SKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVDE--LLDSMKADGID 481
+ L G ++D L+ IP + ++ + + G D LLD DG
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 482 EDEETKEILV 491
+ T IL+
Sbjct: 702 PNHRTWSILL 711
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 152/402 (37%), Gaps = 86/402 (21%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T T+G ++ + + D ALS R M + G +++ Y ++ SK + + +L
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM PD ++ ++IL K
Sbjct: 276 EEMFLMGCVPDAETFN---------------DVILG---------------------LCK 299
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ I++A+ ++ + R D I Y +L++ +G D K R +
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV-------DAAKDLFYRIPKPE 352
Query: 310 YI---TMLEALMKLGEHEEAEKVLKEWELS-GNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+ T++ + G ++A+ VL + S G D N++I GY GLV A +L
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTER------------------GFQCMKAALS-- 405
D+ KG S+ ++ G+ GK + GF C+ +A
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 406 --------VYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP----MNR 451
++ E KG KPD S++S L + V +++ + LR +I N
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE---VDEIKHALWLLRDMISEGVVANT 529
Query: 452 QMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
Y+ I A +R G K +L++ M G DE T L+
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
Length = 938
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 157/390 (40%), Gaps = 57/390 (14%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL C+ + T +A+++F K K+ G+ L + YN M Y K G + +L EMK
Sbjct: 488 LLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGG 547
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ PD Y I+ Y + +++ + + EM + +I D TY A + K+ L+ +
Sbjct: 548 LTPDKIHYTCLISGYCLKGEMQNAQQVFEEM-LKANIEPDIVTYNILASGFCKSGLVMEV 606
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
D+L + ++ + + + Y I + GN SE L+++ + +I Y +M+
Sbjct: 607 FDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCG 666
Query: 317 LMKLG-------------------EHEEAEKVLKEWELSGNSYDTR-----------IPN 346
+ G +H K++ + GN +P+
Sbjct: 667 YLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPD 726
Query: 347 AV-----IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+ I YC NG + A D+V++G + + ++ GY AG+ + Q
Sbjct: 727 VISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQ--- 783
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKAN 461
L V + G KPD T +L E Q E R+ + ++AN
Sbjct: 784 --LFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFL----------LRAN 831
Query: 462 IRNGKGVDELLDSMKADGIDEDEETKEILV 491
++LL SMK I+ D +L+
Sbjct: 832 ------HNKLLSSMKDMQIEPDVPCYTVLI 855
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 146/396 (36%), Gaps = 50/396 (12%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
A + CY Q + F + +G+ S T+N ++ ++TG+YE V EMK
Sbjct: 281 ACITCYDVQ----ATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCF 336
Query: 196 NIFPDNFSYRICINSY-------------------GARSDLEGME--------------- 221
+ PD +++ I S G + D G
Sbjct: 337 QLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLA 396
Query: 222 -IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
+IL+E+ + + ++ Y K +D+A +L+ + D GY++LI
Sbjct: 397 YVILQEINRE-KVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIR 455
Query: 281 LYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
Y +GN + ++ + +L+ KLG EA +++ SG
Sbjct: 456 SYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHL 515
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCM 400
D I N + YC NG + A +L ++ G + + +GY G+ + Q
Sbjct: 516 DKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVF 575
Query: 401 KAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV--AALRTVIPMNRQMYHAFI 458
+ L +E PD + S G V +V + A + + P N Y I
Sbjct: 576 EEMLKANIE-----PDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEP-NSLTYGIAI 629
Query: 459 KANIRNG--KGVDELLDSMKADGIDEDEETKEILVC 492
R G + L + ++ GID E +VC
Sbjct: 630 VGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVC 665
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 9/263 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ + + ++ D+AL + +M EMG+ Y+ + G+Y+ +L E+
Sbjct: 344 TFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEI 403
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
+ + + +Y + ++ L+ E +L Q P D Y+ Y K
Sbjct: 404 NREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNP----DVYGYSYLIRSYCK 459
Query: 250 -ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
NLI+ +E I ++L+ + LG SE + + K +
Sbjct: 460 MGNLINAVDHYEAMVSHGIETNCHI-VSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKV 518
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ K G EA K+L E + G + D +I GYC G +QNA+ + E++
Sbjct: 519 IYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEM 578
Query: 369 VEKGKATTPNSWAVVAAGYFDAG 391
++ ++ ++A+G+ +G
Sbjct: 579 LKANIEPDIVTYNILASGFCKSG 601
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 95/240 (39%), Gaps = 55/240 (22%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y L++ Y + DKA F M + G+++ + Y +M Y K G+ ++ + +M
Sbjct: 729 SYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQM 788
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
I PD +Y + ++ + + +G E I +E S F ++AN
Sbjct: 789 TNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRS----------------FLLRAN- 831
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ +L ++ + D Y LI CK +Y+
Sbjct: 832 ---HNKLLSSMKDMQIEPDVPCYTVLID-------------------GKCK----AEYLV 865
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
EA ++ E G + D A+I GYC+ G + AE +L+++++KG
Sbjct: 866 ------------EARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKG 913
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 116/302 (38%), Gaps = 26/302 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG + + R +A F ++E GI + Y+ ++C Y +G + + +
Sbjct: 624 TYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRV 683
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ D+FS IN +++G + + M +V D +Y+ Y +
Sbjct: 684 ARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEH-DVVPDVISYSKLISIYCQNGD 742
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+DKA +R D I Y L++ Y G E +L+ + Y
Sbjct: 743 MDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 802
Query: 313 MLEALMKLGEHEEAEKVLKE---WELSGN-------------SYDTRIPNAVIIGYCNNG 356
+L+ +K + E + KE + L N D +I G C
Sbjct: 803 LLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAE 862
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAA--GYFDAGKTERGFQCMKAALSVYVEGKGWK 414
+ A + +++++KG TP+++A A GY G+ + ++ + KG +
Sbjct: 863 YLVEARELFDEMLQKG--LTPDAYAYTALINGYCSQGEISKAEDLLQEMID-----KGIE 915
Query: 415 PD 416
PD
Sbjct: 916 PD 917
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 181/435 (41%), Gaps = 32/435 (7%)
Query: 65 LQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG--------RVHGFLS 116
L ++ +K R A EV M +G+ C +A+ DL+ +V F+
Sbjct: 177 LDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMV 236
Query: 117 AESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLY 176
+ + D TY T L+ Y + R+ D A +M+E G L+T+TYN ++
Sbjct: 237 G----AGISPDVYTYST---LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGL 289
Query: 177 SKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHI 233
++G E+ +M+ + PD F+Y IN + +L EM E +P++
Sbjct: 290 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV 349
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
V+ YA+ +++ D+A ++K+ Q + I Y+ L+ +G
Sbjct: 350 VV----YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASL 405
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
L R Y ++E + ++A ++L E E +G S + + +I G C
Sbjct: 406 LLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLC 465
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
+G + A +LE++ KG +A + +GY G + V V
Sbjct: 466 QSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV----- 520
Query: 414 KPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNG--KGVD 469
PD S++ L G V++ + A + R ++P N Y I ++NG + +
Sbjct: 521 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP-NEFTYSGLIHGYLKNGDLESAE 579
Query: 470 ELLDSMKADGIDEDE 484
+L+ M G+ ++
Sbjct: 580 QLVQRMLDTGLKPND 594
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 125/304 (41%), Gaps = 17/304 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y L++ Y R+ A F KM ++ + YN ++ SK G+ E+ +M
Sbjct: 491 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 550
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ + + P+ F+Y I+ Y DLE E +++ M +P+ V+ Y Y K
Sbjct: 551 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI----YIDLLESYFK 606
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTACKRYINR 308
++ I+K S K ++ D Y LI +S GN R L +EK ++
Sbjct: 607 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV 666
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y +++ L K + E+A +L E G + NA+I G C +G + A + +
Sbjct: 667 -YSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 725
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP---KVITSILS 425
+ KG ++ + G G F L+ G PD V+T+ S
Sbjct: 726 LAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT-----GITPDAFVYSVLTTGCS 780
Query: 426 KLGD 429
GD
Sbjct: 781 SAGD 784
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 159/356 (44%), Gaps = 14/356 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+NC R RQ ++AL F +MK GI +TYN ++ +Y + G+ + ++ ++
Sbjct: 180 TFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKL 239
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIK 249
K+ N D +Y N Y D + + +++EM S P+ V+ + + + K
Sbjct: 240 KSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLS----K 295
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A +++A V + + + L+ +Y +G + +++ KT +
Sbjct: 296 AGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAV 355
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++++A ++ G E+AE +LKE + +G + D + Y G+V A + + +V
Sbjct: 356 YNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVV 415
Query: 370 E-KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
GK TP ++ A AG+ E+ + + E PD +V +LS +
Sbjct: 416 ALNGKPDTPLFTVMIRACKL-AGEIEQASKIFDEMM----ESGCCSPDERVSGMLLSCMA 470
Query: 429 DEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDED 483
S + A + L + P++ M K R+ V E+++ +D + D
Sbjct: 471 MAKSDDERLAILDCLDKFNAPLHELMSAIVRKEEPRSRDEVAEMVEKFISDYPETD 526
>gi|359486048|ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic [Vitis vinifera]
gi|298204537|emb|CBI23812.3| unnamed protein product [Vitis vinifera]
Length = 659
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/414 (19%), Positives = 188/414 (45%), Gaps = 54/414 (13%)
Query: 57 GNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLS 116
G+ ++V +L I+R K R+ ++ DWM + F+ ++ + +G+ +
Sbjct: 96 GDMLKVQDLNVILRHFGKLCRWQDLSQLFDWMQKHEKITFS--SYSTYIKFMGKSLNPIK 153
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM- 173
A +++++D+ ++L+C +R + + +L F +MK+ G+ +TY+ ++
Sbjct: 154 ALEIYNSIQDESVRNNVSVCNSVLSCLIRNGKFENSLKLFHQMKQDGLRPDAVTYSTLLA 213
Query: 174 -CLYSKTGQYEKVPDVLTEM--------------------------KAKNIF-------- 198
C+ K G Y K +++ EM +A+N F
Sbjct: 214 GCMKVKHG-YSKALELVQEMERSRLPMDSVIYGTLLAVCASNNRCKEAENYFNQMKDEGH 272
Query: 199 -PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKAS 257
P+ F Y +N+Y A D + ++++++M+S +V + + Y++ L +K+
Sbjct: 273 LPNVFHYSSLLNAYSADGDYKKADMLVQDMKSAG-LVPNKVILTTLLKVYVRGGLFEKSR 331
Query: 258 DVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITML 314
++L + E+ +D + Y L+ L +L + + K+ + D Y M+
Sbjct: 332 ELLAELEDLGYAEDEMPYCLLMD---GLAKSRRILEAKSIFEEMKKKQVKSDGYCYSIMI 388
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
A + G +EA+++ +++E + + YD + N ++ YC G +++ ++ + E +
Sbjct: 389 SAFCRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMMRKMDELAIS 448
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
N++ ++ + ++ M+ + KG +P+ ++ +S++S LG
Sbjct: 449 PDWNTFHILIKYFCKEKLYLLAYRTMED-----MHNKGHQPEEELCSSLISHLG 497
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 173/379 (45%), Gaps = 26/379 (6%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
N+K D TY T +++ R D A+S F++M+ GI S +TYN ++ K G++
Sbjct: 223 NVKADVFTYST---IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWST 239
+L +M ++ I P+ ++ + ++ + L+ + +EM ++ P+I+ T
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII----T 335
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
Y + Y N + +A+++L D + + LI Y + + ++++ +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF---R 392
Query: 300 TACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
KR + + +T +++ + G+ + AE++ +E G D ++ G C+NG
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
++ A I EDL + + + G GK E + L + KG KP+
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN-----LFCSLPCKGVKPN 507
Query: 417 PKVITSILSKLGDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNG--KGVDELL 472
T ++S L +GS+ + + + P N Y+ I+A++R+G +L+
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP-NDCTYNTLIRAHLRDGDLTASAKLI 566
Query: 473 DSMKADGIDEDEETKEILV 491
+ MK+ G D + ++++
Sbjct: 567 EEMKSCGFSADASSIKMVI 585
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 175/446 (39%), Gaps = 38/446 (8%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGI------------CVFAPCDHAVQLDLIGRV 111
+ R + + K+F+ L+ + GI C C ++G+V
Sbjct: 90 DFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKV 149
Query: 112 HGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
Y E T+ L+N + + KA+ +M E G +TYN
Sbjct: 150 MKL----GY-------EPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNS 198
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP 231
I+ ++G D+L +M+ +N+ D F+Y I+S ++ + +EME++
Sbjct: 199 IVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK- 257
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
I TY S KA + + +LK R + I +N L+ ++ G E
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 292 LRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
L+ K R I+ + I T+++ EA +L + S D ++
Sbjct: 318 NELY---KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 349 IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYV 408
I GYC V + + ++ ++G +++++ G+ +GK + + + +S
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS--- 431
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKG 467
G PD +L L D G ++ +E F ++ + + MY I+ + GK
Sbjct: 432 --HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 468 VD--ELLDSMKADGIDEDEETKEILV 491
D L S+ G+ + T +++
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMI 515
>gi|8778411|gb|AAF79419.1|AC025808_1 F18O14.1 [Arabidopsis thaliana]
Length = 689
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 143/349 (40%), Gaps = 45/349 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+N Y + R M E G++ + +TY ++ Y K G E+ V +
Sbjct: 48 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 107
Query: 193 KAKNIFPDNFSYRICINSY--------GARSDLEGMEIILR------------------- 225
K K + D Y + ++ Y R +EI +R
Sbjct: 108 KEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQL 167
Query: 226 -EMESQPHIVLDWS------TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
E E + DWS TY + Y +A +D+A + + ++ + YN L
Sbjct: 168 VEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNIL 227
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWEL 335
+ Y+ +G +VL LW K KR +N D I T+LEAL KLG+ EA K+ +
Sbjct: 228 LKGYSRIGAFHDVLSLW---KMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 284
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G DT N +I G C V A+ IL+++ ++ ++ GY+ G +
Sbjct: 285 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 344
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
F A+ Y+E KG P ++ +++S + V V LR
Sbjct: 345 AF-----AVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELR 388
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 104/271 (38%), Gaps = 59/271 (21%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKE-MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
T ++N Y R DKA+ ++ + +G+ L+ +TYN +
Sbjct: 12 TCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSL------------------- 52
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
IN Y D+EGM +LR M S+ + + TY S Y K
Sbjct: 53 ----------------INGYAMIGDVEGMTRVLRLM-SERGVSRNVVTYTSLIKGYCKKG 95
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--------LEKTACK 303
L+++A V + +E+ D Y L+ Y G + +R+ D T C
Sbjct: 96 LMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICN 155
Query: 304 RYINRDYITMLEALMKLGEHEEAEKV---LKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
IN K G+ EAE++ + +W L D N ++ GYC G V
Sbjct: 156 SLIN--------GYCKSGQLVEAEQIFSRMNDWSLKP---DHHTYNTLVDGYCRAGYVDE 204
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
A + + + +K T ++ ++ GY G
Sbjct: 205 ALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 235
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 90/207 (43%)
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M + + PD F+ I +N+Y +++ + +E ES + L+ TY S + Y
Sbjct: 1 MISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG 60
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
++ + VL+ ER ++ + Y LI Y G E +++L K Y
Sbjct: 61 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 120
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+++ + G+ +A +V G +T I N++I GYC +G + AE I + +
Sbjct: 121 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 180
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQ 398
+++ + GY AG + +
Sbjct: 181 SLKPDHHTYNTLVDGYCRAGYVDEALK 207
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 151/393 (38%), Gaps = 27/393 (6%)
Query: 114 FLSAESYFSNLKD--DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
+ AE FS + D + + TY L++ Y R D+AL +M + + + +TYN
Sbjct: 167 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 226
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQ 230
++ YS+ G + V + M + + D S + + D E M+ L E
Sbjct: 227 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMK--LWENVLA 284
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
++ D T K +++A ++L + Y L Y +GN E
Sbjct: 285 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 344
Query: 291 VLRLWDLEKTACKRYINRD--------YITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
A K Y+ R Y T++ K + ++ E G +
Sbjct: 345 AF--------AVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTV 396
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA 402
A+I G+CN G++ A A +++EKG N + +A F K + ++
Sbjct: 397 ATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQK 456
Query: 403 ALSVYVEGKGWKPDPKVI-TSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKAN 461
+ + G++ + + S + L + + VE + ++P N +Y+ I
Sbjct: 457 IVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPK-KLLVP-NNIVYNVAIAGL 514
Query: 462 IRNGKGVDE---LLDSMKADGIDEDEETKEILV 491
+ GK D D + +D DE T IL+
Sbjct: 515 CKAGKLEDARKLFSDLLSSDRFIPDEYTYTILI 547
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF-PDNFSYRICINSYGARSDLEGMEII 223
+ + YN + K G+ E + +++ + + F PD ++Y I I+ D+
Sbjct: 503 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINK-AFT 561
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
LR+ + I+ + TY + K +D+A +L K ++ + I YN LI
Sbjct: 562 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 621
Query: 284 SLGNKSEVLRL 294
GN +E +RL
Sbjct: 622 KSGNVAEAMRL 632
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 111/288 (38%), Gaps = 44/288 (15%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
QTY AL + Y + +A + M+ GI + YN ++ K KV D++ E
Sbjct: 327 QTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIE 386
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
++A+ + P +Y I + ++ EM + I L+ + + A+ + +
Sbjct: 387 LRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM-IEKGITLNVNICSKIANSLFRLD 445
Query: 252 LIDKASDVLKK--------------------------------------AEERLEQKDGI 273
ID+A +L+K ++L + I
Sbjct: 446 KIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNI 505
Query: 274 GYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI--TMLEALMKLGEHEEAEKVLK 331
YN I+ G + +L+ + + R+I +Y ++ G+ +A +
Sbjct: 506 VYNVAIAGLCKAGKLEDARKLFS-DLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRD 564
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
E L G + NA+I G C G V A+ +L L +KG TPN+
Sbjct: 565 EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKG--ITPNA 610
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 129/303 (42%), Gaps = 6/303 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++ Y + ++ D+A R M G+ + LTYN ++ + G+ E+ VL EM
Sbjct: 240 TYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEM 299
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD +Y +N Y + ++ EM + + D TY S + KA
Sbjct: 300 DRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEM-LRNGLPPDVVTYTSLINTMCKAGN 358
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+++A + + R + +G+ Y LI+ ++ G E R+WD + Y
Sbjct: 359 LNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNA 418
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+L G EEA +L+ E G S D + +I G+C + A + ++VEKG
Sbjct: 419 LLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKG 478
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
+ +++ + G + + + L+ K PD TS+++ EG
Sbjct: 479 VSPDAITYSSLIQGLCEQRRLNEACDLFQEMLN-----KSLLPDEFTYTSLINGYCKEGD 533
Query: 433 VQD 435
+ +
Sbjct: 534 LNE 536
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 172/407 (42%), Gaps = 53/407 (13%)
Query: 133 TYGALLNCYVRQRQ-TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+Y A+L+ VR R+ A +R+M G++L+ +YN ++ + G E E
Sbjct: 169 SYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEE 228
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYI 248
M+ P+ +Y I +Y ++ +LR M +P+++ TY +
Sbjct: 229 MERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLL----TYNMVINGLC 284
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN-------KSEVLR-------- 293
+ I++ S VL + + + DG+ YN L++ Y +GN SE+LR
Sbjct: 285 RVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVV 344
Query: 294 -LWDLEKTACKR-YINR------------------DYITMLEALMKLGEHEEAEKVLKEW 333
L T CK +NR Y +++ + G +EA ++ E
Sbjct: 345 TYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEM 404
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
SG NA++ G+C +G ++ A +L + KG + S++ + AG+ +
Sbjct: 405 IRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQEL 464
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQ 452
+R FQ M A + VE KG PD +S++ L ++ + + + F L + +
Sbjct: 465 DRAFQ-MNAEM---VE-KGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEF 519
Query: 453 MYHAFIKANIRNGKGVDELL---DSMKADGIDEDEETKEILVCTMEK 496
Y + I + G ++E L D M G D T +L+ + K
Sbjct: 520 TYTSLINGYCKEGD-LNEALNLHDEMIKKGFLPDTVTYNVLINGLNK 565
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 150/364 (41%), Gaps = 49/364 (13%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY ALLN + + ++A+ R M+ G++ ++Y+ I+ + + + ++ +
Sbjct: 412 TIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMN 471
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM K + PD +Y I + L + +EM ++ ++ D TY S + Y K
Sbjct: 472 AEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNK-SLLPDEFTYTSLINGYCK 530
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+++A ++ + ++ D + YN LI+ L K A R R
Sbjct: 531 EGDLNEALNLHDEMIKKGFLPDTVTYNVLIN---------------GLNKQARTREAKR- 574
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN----------AVIIGYCNNGLVQ 359
L+KL E +G +YDT I + A+I G+C GL+
Sbjct: 575 ------LLLKLFYDESIP--------NGITYDTLIESCSDIEFKSVVALIKGFCMKGLMN 620
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
A+ + E ++++ + + V+ G+ G + + K + G+ P
Sbjct: 621 EADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDF-----GFIPHTVT 675
Query: 420 ITSILSKLGDEGSVQDVEAFVA-ALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMK 476
I +++ L EG + + + LR+ + ++ A ++ N + G V LL M
Sbjct: 676 IIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMA 735
Query: 477 ADGI 480
DG
Sbjct: 736 KDGF 739
>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
Length = 820
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 155/390 (39%), Gaps = 57/390 (14%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL C+ + T +A+++F K K+ G+ L + YN M Y K G + +L EMK
Sbjct: 370 LLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGG 429
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ PD Y I+ Y + +++ + + EM + +I D TY A + K+ L+ +
Sbjct: 430 LTPDKIHYTCLISGYCLKGEMQNAQQVFEEM-LKANIEPDIVTYNILASGFCKSGLVMEV 488
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
D+L + ++ + + + Y I + GN SE L+++ + +I Y +M+
Sbjct: 489 FDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCG 548
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYD-----------TRIPNA------------------ 347
+ G + A + GN D R+ N
Sbjct: 549 YLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPD 608
Query: 348 ------VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+I YC NG + A D+V++G + + ++ GY AG+ + Q
Sbjct: 609 VISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQ--- 665
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKAN 461
L V + G KPD T +L E Q E R+ + ++AN
Sbjct: 666 --LFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFL----------LRAN 713
Query: 462 IRNGKGVDELLDSMKADGIDEDEETKEILV 491
++LL SMK I+ D +L+
Sbjct: 714 ------HNKLLSSMKDMQIEPDVPCYTVLI 737
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 146/396 (36%), Gaps = 50/396 (12%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
A + CY Q + F + +G+ S T+N ++ ++TG+YE V EMK
Sbjct: 163 ACITCYDVQ----ATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCF 218
Query: 196 NIFPDNFSYRICINSY-------------------GARSDLEGME--------------- 221
+ PD +++ I S G + D G
Sbjct: 219 QLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLA 278
Query: 222 -IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
+IL+E+ + + ++ Y K +D+A +L+ + D GY++LI
Sbjct: 279 YVILQEINRE-KVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIR 337
Query: 281 LYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
Y +GN + ++ + +L+ KLG EA +++ SG
Sbjct: 338 SYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHL 397
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCM 400
D I N + YC NG + A +L ++ G + + +GY G+ + Q
Sbjct: 398 DKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVF 457
Query: 401 KAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV--AALRTVIPMNRQMYHAFI 458
+ L +E PD + S G V +V + A + + P N Y I
Sbjct: 458 EEMLKANIE-----PDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEP-NSLTYGIAI 511
Query: 459 KANIRNG--KGVDELLDSMKADGIDEDEETKEILVC 492
R G + L + ++ GID E +VC
Sbjct: 512 VGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVC 547
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 9/263 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ + + ++ D+AL + +M EMG+ Y+ + G+Y+ +L E+
Sbjct: 226 TFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEI 285
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
+ + + +Y + ++ L+ E +L Q P D Y+ Y K
Sbjct: 286 NREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNP----DVYGYSYLIRSYCK 341
Query: 250 -ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
NLI+ +E I ++L+ + LG SE + + K +
Sbjct: 342 MGNLINAVDHYEAMVSHGIETNCHI-VSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKV 400
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ K G EA K+L E + G + D +I GYC G +QNA+ + E++
Sbjct: 401 IYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEM 460
Query: 369 VEKGKATTPNSWAVVAAGYFDAG 391
++ ++ ++A+G+ +G
Sbjct: 461 LKANIEPDIVTYNILASGFCKSG 483
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 95/240 (39%), Gaps = 55/240 (22%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y L++ Y + DKA F M + G+++ + Y +M Y K G+ ++ + +M
Sbjct: 611 SYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQM 670
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
I PD +Y + ++ + + +G E I +E S F ++AN
Sbjct: 671 TNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRS----------------FLLRAN- 713
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ +L ++ + D Y LI CK +Y+
Sbjct: 714 ---HNKLLSSMKDMQIEPDVPCYTVLID-------------------GKCK----AEYLV 747
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
EA ++ E G + D A+I GYC+ G + AE +L+++++KG
Sbjct: 748 ------------EARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKG 795
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 116/302 (38%), Gaps = 26/302 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG + + R +A F ++E GI + Y+ ++C Y +G + + +
Sbjct: 506 TYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRV 565
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ D+FS IN +++G + + M +V D +Y+ Y +
Sbjct: 566 ARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEH-DVVPDVISYSKLISIYCQNGD 624
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+DKA +R D I Y L++ Y G E +L+ + Y
Sbjct: 625 MDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 684
Query: 313 MLEALMKLGEHEEAEKVLKE---WELSGNSY-------------DTRIPNAVIIGYCNNG 356
+L+ +K + E + KE + L N D +I G C
Sbjct: 685 LLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAE 744
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAA--GYFDAGKTERGFQCMKAALSVYVEGKGWK 414
+ A + +++++KG TP+++A A GY G+ + ++ + KG +
Sbjct: 745 YLVEARELFDEMLQKG--LTPDAYAYTALINGYCSQGEISKAEDLLQEMID-----KGIE 797
Query: 415 PD 416
PD
Sbjct: 798 PD 799
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 189/454 (41%), Gaps = 61/454 (13%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L +K G ++ + +I L K +F QA+E+ D M +G + P H
Sbjct: 180 LAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG---YQPDVH-------- 228
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
TY ++N + +T A FRKM E G +TY
Sbjct: 229 -----------------------TYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTY 265
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
+ I+ K + + D+ + MKAK I P+ F+Y I S +L EM S
Sbjct: 266 STIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS 325
Query: 230 ---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
P+IV T++ + + K + +A VLK E + + + Y+ L++ Y+
Sbjct: 326 LNIMPNIV----TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQA 381
Query: 287 NKSEVLRLWDLEKT-ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
E +L+D+ T CK + Y ++ K EA+++ E G + D
Sbjct: 382 EVVEARKLFDVMITKGCKPDV-FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSY 440
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
N +I G C G ++ A + ++++ G +++++ G+ G + F+ +A S
Sbjct: 441 NTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 500
Query: 406 VYVEGKGWKPDPKVITSILSKLGDEGSVQDV-----EAFVAALRTVIPMNRQMYHAFIKA 460
Y+ KP+ + ++ + ++++ E FV L+ N Q+Y I
Sbjct: 501 TYL-----KPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQP----NVQIYTTIING 551
Query: 461 NIRNGKGVDELLDS---MKADGIDEDEETKEILV 491
+ G +DE L++ M+ DG +E + +++
Sbjct: 552 LCKEGL-LDEALEAFRNMEEDGCPPNEFSYNVII 584
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 136/343 (39%), Gaps = 24/343 (6%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
II L K +R ++AL++ +M KGI +P I + + FS ++
Sbjct: 268 IIDSLCKDRRVNEALDIFSYMKAKGI---SPN--------IFTYNSLIQGLCNFSRWREA 316
Query: 128 EKTYQ------------TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCL 175
T+ L+N + ++ +A + M EMG+ + +TY+ +M
Sbjct: 317 SAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG 376
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVL 235
YS + + + M K PD FSY I IN Y + + + EM Q +
Sbjct: 377 YSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG-LTP 435
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
D +Y + + + +A D+ K D Y+ L+ + G ++ RL+
Sbjct: 436 DIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLF 495
Query: 296 DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
++ + Y +++A+ K +EA K+ E + G + +I +I G C
Sbjct: 496 RAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKE 555
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
GL+ A ++ E G S+ V+ G+ R Q
Sbjct: 556 GLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQ 598
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 160/417 (38%), Gaps = 51/417 (12%)
Query: 115 LSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
LS + + L D TY T L+NC+ + ++ D S K+ ++G+ L+ +T+N ++
Sbjct: 144 LSKQMELAGLSPD--TY-TLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLIN 200
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQP 231
K G++ + ++ +M A+ PD +Y IN + + R+M QP
Sbjct: 201 GLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQP 260
Query: 232 HIV------------------LDWSTYASA----AHFYIKANLID---------KASDVL 260
+V LD +Y A + + +LI +AS +L
Sbjct: 261 DVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAML 320
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEAL 317
+ + + ++ LI+++ GN V + KT + + + +T ++
Sbjct: 321 NEMMSLNIMPNIVTFSLLINIFCKEGN---VFEARGVLKTMTEMGVEPNVVTYSSLMNGY 377
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
E EA K+ G D N +I GYC + A+ + +++ +G
Sbjct: 378 SLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDI 437
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV-QDV 436
S+ + G G+ K L+ G PD + +L +G + +
Sbjct: 438 VSYNTLIDGLCQLGRLREAHDLFKNMLT-----NGNLPDLCTYSILLDGFCKQGYLAKAF 492
Query: 437 EAFVAALRTVIPMNRQMYHAFIKANI--RNGKGVDELLDSMKADGIDEDEETKEILV 491
F A T + N MY+ I A RN K +L + G+ + + ++
Sbjct: 493 RLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTII 549
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 192/441 (43%), Gaps = 26/441 (5%)
Query: 55 KNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPC--DHAVQLDLIGRVH 112
K G K + +I L R +A+E D++ +G + P H + ++ + ++
Sbjct: 167 KLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRG---YQPTVYTHTMIVNGLCKIG 223
Query: 113 GFLSAESYFSNLK--DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYN 170
+A + + D E +Y +++ + R ++A+ F M+ +GI+ + +TYN
Sbjct: 224 KTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYN 283
Query: 171 DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARS-DLEGMEII--LREM 227
++ +GQ+++ + EM N+ PD ++ I +++ LE + + + ++
Sbjct: 284 SLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQI 343
Query: 228 ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN 287
+P IV TY+S H K++L ++S +L + R + D + ++ + ++ G
Sbjct: 344 AMEPDIV----TYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGM 399
Query: 288 KSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
SE + +L R Y ++++ + +EA KV G + D N
Sbjct: 400 VSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNI 459
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNS--WAVVAAGYFDAGKTERGFQCMKAALS 405
+I GYC + + A+ + +++ KG TPNS + +G AG+ + K S
Sbjct: 460 LIKGYCKSERIDEAKQLFDEMSHKG--LTPNSITHTTLISGLCQAGRPYAAKELFKKMGS 517
Query: 406 VYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRN 464
G PD +++LS G + + A AL ++ + N + + +
Sbjct: 518 -----HGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKA 572
Query: 465 GKGVD--ELLDSMKADGIDED 483
GK D EL S+ + + D
Sbjct: 573 GKLEDAKELFSSLSIEELQPD 593
>gi|297847016|ref|XP_002891389.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337231|gb|EFH67648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 371
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 123/249 (49%), Gaps = 8/249 (3%)
Query: 46 IEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQL 105
++ L+ W + G++V+ ++ ++ D R ++FS+ALE S+WM + + P D+A +L
Sbjct: 67 VKTHLERWRELGDQVKPSYVRGLVEDFRSTEQFSKALEASEWMCEQRVFNVFPEDYAARL 126
Query: 106 DLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQT-DKALSHFRKMKEMGIAL 164
+L+ V G AE +F + ++ + Y Y LL Y + +T DKA F KM+++G
Sbjct: 127 NLVETVLGLEEAEKFFERIPENMRDYSVYENLLRSYTKSEKTLDKAEDTFEKMRDLGFLS 186
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG--MEI 222
++ ++ LY K + + V + EM N+ D I +N SD + ++
Sbjct: 187 KPSPFDTMISLYRKLNKRDMVKKLKYEMMENNVKIDR---PIELNVLSIVSDFKRDYLDP 243
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+ + + + ++ D Y + +K + + A + +K + + D LIS +
Sbjct: 244 LWNKYKKEGKLMDD--EYRIRISYLLKLDDVQGAEKIYQKWQPTGPKLDMSVPGLLISRF 301
Query: 283 ASLGNKSEV 291
+ GN+S+V
Sbjct: 302 RAEGNESKV 310
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 180/403 (44%), Gaps = 28/403 (6%)
Query: 105 LDLIGRVHGFLSAESYFSNLKD---------DEKTYQTYGALLNCYVRQRQTDKALSHFR 155
++L+ R+ G S S S L D D + Y T +L+ Y R + +A+ F
Sbjct: 183 VELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTT---ILHSYARTGKYKRAIDLFG 239
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQ-YEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR 214
KMKE+G+ + +TYN ++ +Y K G+ ++++ ++L EM++K + D F+ I++ G
Sbjct: 240 KMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGRE 299
Query: 215 SDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
L+ L E++ +P V TY S + KA + +A +LK+ E+ D
Sbjct: 300 GMLDEARKFLAELKFNGYKPGTV----TYNSMLQVFGKAGIYTEALSILKEMEDNNCPPD 355
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
+ YN L + Y G E + + D + Y T+++A K G ++A ++
Sbjct: 356 SVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFS 415
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+ G + + N+V+ ++ +L ++ G A +W + A + G
Sbjct: 416 LMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEG 475
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS-VQDVEAFVAALRTVIPMN 450
K + ++ ++ G++PD +++S GS V + + +++
Sbjct: 476 KHNYVNKVLRE-----MKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPC 530
Query: 451 RQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
Y+A + A R G K + ++ M+ G +E + +L+
Sbjct: 531 VTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLL 573
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 7/263 (2%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E T+ L++ Y R + + +M + G TYN ++ ++ G ++
Sbjct: 493 EPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAES 552
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDW---STYASAA 244
V+ +M+ K P+ SY + ++ Y +++G+E + +E+ H+ W T
Sbjct: 553 VIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDG-HVFPSWILLRTLVLTN 611
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
H +++A D L+K + D + N ++S++A S+ + +
Sbjct: 612 HKCRHLRGMERAFDQLQKYGYK---PDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQ 668
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y +++ ++ GE +AE+VLK + SG D N VI G+C GL+Q A +
Sbjct: 669 PNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGV 728
Query: 365 LEDLVEKGKATTPNSWAVVAAGY 387
L ++ KG T ++ +GY
Sbjct: 729 LSEMTTKGIQPTIVTYNTFLSGY 751
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 144/328 (43%), Gaps = 24/328 (7%)
Query: 76 KRFSQALEVSDWMNRKGI--------CVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+ + + LE+ D M KG+ V + C LD FL AE F+ K
Sbjct: 265 RSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLD---EARKFL-AELKFNGYKPG 320
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
TY + +L + + +ALS ++M++ ++TYN++ Y + G ++
Sbjct: 321 TVTYNS---MLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMA 377
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGA---RSDLEGMEIILREMESQPHIVLDWSTYASAA 244
V+ M +K + P+ +Y I++YG D + +++++ P++ TY S
Sbjct: 378 VIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVY----TYNSVL 433
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K + + VL + + + +N ++++ + G + V ++ E C
Sbjct: 434 AMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLR-EMKNCGF 492
Query: 305 YINRD-YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
++D + T++ A + G ++ K+ E SG + NA++ G + AE+
Sbjct: 493 EPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAES 552
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+++D+ KG NS++++ Y AG
Sbjct: 553 VIQDMRTKGFKPNENSYSLLLHCYSKAG 580
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 145/355 (40%), Gaps = 46/355 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ Y + + D AL F MK++G A + TYN ++ + K + E V VL EM
Sbjct: 393 TYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEM 452
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K P+ + W+T + K N
Sbjct: 453 KLNGCAPNRAT---------------------------------WNTMLAVCSEEGKHNY 479
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYI 311
++K VL++ + + D +N LIS YA G++ + +++ ++ K+ + Y
Sbjct: 480 VNK---VLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTT-YN 535
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+L AL + G+ + AE V+++ G + + ++ Y G V+ E + +++ +
Sbjct: 536 ALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYD- 594
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
SW ++ K R + M+ A ++ G+KPD VI S+LS
Sbjct: 595 --GHVFPSWILLRTLVLTNHKC-RHLRGMERAFD-QLQKYGYKPDLVVINSMLSMFARNK 650
Query: 432 SVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
+ + + N Y+ + +R G+ +E+L ++ G + D
Sbjct: 651 MFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPD 705
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ YVR+ + KA + ++ G ++YN ++ + + G ++ VL+EM
Sbjct: 673 TYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEM 732
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILR---EMESQPHIVLDWSTYASAAHFYIK 249
K I P +Y ++ Y + ++R E +P + TY Y K
Sbjct: 733 TTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSEL----TYKILVDGYCK 788
Query: 250 ANLIDKASDVLKKAEE 265
A ++A D + K +E
Sbjct: 789 AGKYEEAMDFVSKIKE 804
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 155/363 (42%), Gaps = 11/363 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y ++N Y R + DK MK G+ ++ Y I+ L + + + + +EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ I PD Y I+ + R D+ EM S+ I D TY + + +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGD 401
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYI 311
+ +A + + + + D + + LI+ Y G+ + R+ + + + C + Y
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV-VTYT 460
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T+++ L K G+ + A ++L E G + N+++ G C +G ++ A ++ +
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G ++ + Y +G+ ++ + +K L GKG +P +++ G
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEML-----GKGLQPTIVTFNVLMNGFCLHG 575
Query: 432 SVQDVEAFVA-ALRTVIPMNRQMYHAFIKA-NIRNG-KGVDELLDSMKADGIDEDEETKE 488
++D E + L I N +++ +K IRN K + M + G+ D +T E
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 489 ILV 491
LV
Sbjct: 636 NLV 638
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 1/212 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++N + ++A+ + + G+ T+TY +M Y K+G+ +K ++L EM
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P ++ + +N + LE E +L M ++ I + +T+ S Y N
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNN 611
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A+ + K R DG Y L+ + N E L+ K Y
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
+++ +K + EA +V + G + D I
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 131/310 (42%), Gaps = 37/310 (11%)
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCL-YSKTGQYEKVPDVLTEM--------KAKNIFPDN 201
+S F + ++ + S + + D++ Y G +V DV ++ +A+ +F
Sbjct: 142 ISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKM 201
Query: 202 FSYRICI-----NSYGARSDLEGME-----IILREMESQPHIVLDW--STYASAAHFYIK 249
+Y + + N Y R + + I+ RE P + + W ++Y HF +
Sbjct: 202 LNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF---PEVGVCWNVASYNIVIHFVCQ 258
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
I +A +L E + D I Y+ +++ Y G +V +L ++ K + +
Sbjct: 259 LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ L ++ + EAE+ E G DT + +I G+C G ++ A ++
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM- 377
Query: 370 EKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILS 425
+ TP+ ++ + +G+ G M A ++ E KG +PD T +++
Sbjct: 378 -HSRDITPDVLTYTAIISGFCQIGD-------MVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 426 KLGDEGSVQD 435
G ++D
Sbjct: 430 GYCKAGHMKD 439
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 156/363 (42%), Gaps = 44/363 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
++ L+N V+ + D AL F + K G+ + TY ++ K G +E V V EM
Sbjct: 192 SFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEM 251
Query: 193 KAKNIFPDNFSYR-----IC------------------------------INSYGARSDL 217
K + D++ Y +C I + + L
Sbjct: 252 KEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKL 311
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
+ E + EME Q +V D Y + H Y + DKA V K R + + + ++
Sbjct: 312 DEAESVFLEMEKQG-LVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSC 370
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRD-YITMLEALMKLGEHEEAEKVLKEWELS 336
++ +G EV+ +++ E +I+R Y + +AL KLG+ ++A +L E +
Sbjct: 371 ILHCLDEMGRALEVVDMFE-EFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSM 429
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
D + +I GY G A+++ +++ E+G ++ V+AAG+F +
Sbjct: 430 QLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFF---RNRTD 486
Query: 397 FQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYH 455
F+ M L Y+E +G +P+ I+ L G V++ E F L+ + ++ ++Y
Sbjct: 487 FEAMD--LLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYT 544
Query: 456 AFI 458
A +
Sbjct: 545 ALV 547
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 118/271 (43%), Gaps = 7/271 (2%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L+N Y Q + +A S F++M+E G + YN + + + + D+L M+
Sbjct: 438 YTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYME 497
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
++ + P++ +++I I + +E E ++ + + + Y + + Y +A LI
Sbjct: 498 SQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGES-VEISVEIYTALVNGYCEAALI 556
Query: 254 DKASDV------LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
+K+ ++ L+ E + + Y+ + + GN L++L
Sbjct: 557 EKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDA 616
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y M+ K EA ++ K+ + G + D +I GYC ++ A + +D
Sbjct: 617 VTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKD 676
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ E+G ++ V+ G ++G TE FQ
Sbjct: 677 MKERGIKPDVIAYTVIIKGLLNSGHTEIAFQ 707
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 140/367 (38%), Gaps = 48/367 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y AL++ Y R DKAL+ ++ M GI + + ++ I+ + G+ +V D+ E
Sbjct: 332 VYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEF 391
Query: 193 KAKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
K +F D +Y I ++ G D GM L E++S + +D Y + + Y
Sbjct: 392 KESGLFIDRKAYNILFDALCKLGKVDDAVGM---LDELKSM-QLDVDMKHYTTLINGYFL 447
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+A + K+ EER + D + YN L + + N+++
Sbjct: 448 QGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGF--FRNRTDF------------------ 487
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
EA +L E G ++ +I G C+ G V+ AE L
Sbjct: 488 ---------------EAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLK 532
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA--ALSVYVEGKGWKPDPKVITSILSKL 427
+ + + + GY +A E+ + +A L +E KP + + I + L
Sbjct: 533 GESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLE-MNMKPSKVMYSKIFTAL 591
Query: 428 GDEGSVQDVEA-FVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDE 484
G+++ F + T + Y I + EL MK GI D
Sbjct: 592 CCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDA 651
Query: 485 ETKEILV 491
T I++
Sbjct: 652 VTYTIMI 658
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 15/235 (6%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDD-- 127
R R F +A+++ ++M +G+ P H + ++ + AE +F+ LK +
Sbjct: 481 FRNRTDF-EAMDLLNYMESQGV---EPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESV 536
Query: 128 EKTYQTYGALLNCYV------RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
E + + Y AL+N Y + + +A R M EM + S + Y+ I G
Sbjct: 537 EISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGN 596
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
E + PD +Y I IN Y + L + ++M+ + I D TY
Sbjct: 597 MEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERG-ITPDAVTYT 655
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
+ Y K N + +A ++ K +ER + D I Y +I + G+ +L++
Sbjct: 656 IMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYN 710
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 153/359 (42%), Gaps = 38/359 (10%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E T Y +L++ Y R ++ALS RKMKE G+ +S +TY+ I+ ++K G +
Sbjct: 338 EPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADR 397
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
E K ++ + Y I +Y +++ E ++REME + I Y + Y
Sbjct: 398 WFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGE-GIDAPIDIYHTMMDGY 456
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
+K V ++ +E + Y LI+LYA +G S+ L + + ++A ++
Sbjct: 457 TMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNM 516
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
+ Y ++ +KL + A + ++ G D + N +I +C G + A ++++
Sbjct: 517 KTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKE 576
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ ++ T ++ + G+ AG+ MK AL V+ +
Sbjct: 577 MQKERHRPTSRTFMPIIHGFARAGE-------MKRALDVF-----------------DMM 612
Query: 428 GDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEET 486
G + V F A + ++ RQM A E+LD M G+ +E T
Sbjct: 613 RRSGCIPTVHTFNALILGLVE-KRQMEKAI------------EILDEMALAGVSPNEHT 658
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 148/380 (38%), Gaps = 19/380 (5%)
Query: 116 SAESYFSNLKDDEKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
+A+ +F KD YG ++ Y + D+A + R+M+ GI Y+ +M
Sbjct: 394 AADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMM 453
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
Y+ G EK V +K P SY IN Y + + + MES I
Sbjct: 454 DGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESA-GI 512
Query: 234 VLDWSTYASAAHFYIK----ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ TY+ + ++K AN DV+K + D + YN +I + +G
Sbjct: 513 KHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGL----KPDVVLYNNIIRAFCGMGTMD 568
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+ + + R +R ++ ++ + GE + A V SG NA+I
Sbjct: 569 RAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALI 628
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
+G ++ A IL+++ G + +++ + GY G T + F+ +
Sbjct: 629 LGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYF-----TKLR 683
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK-- 466
+G + D ++L G +Q A + IP N +Y+ I R G
Sbjct: 684 DEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVW 743
Query: 467 GVDELLDSMKADGIDEDEET 486
+L+ MK G+ D T
Sbjct: 744 EAADLMQQMKQGGVKPDIHT 763
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 117/266 (43%), Gaps = 14/266 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGF-------LSAESY 120
II + +AL+V D M R G C+ P H ++G V + E
Sbjct: 592 IIHGFARAGEMKRALDVFDMMRRSG-CI--PTVHTFNALILGLVEKRQMEKAIEILDEMA 648
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+ + +E TY T +++ Y T KA +F K+++ G+ L TY ++ K+G
Sbjct: 649 LAGVSPNEHTYTT---IMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSG 705
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ + V EM A+NI + F Y I I+ + R D+ ++++M+ Q + D TY
Sbjct: 706 RMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMK-QGGVKPDIHTY 764
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
S + KA + +AS ++++ E + + Y LI +A + LR + K
Sbjct: 765 TSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKL 824
Query: 301 ACKRYINRDYITMLEALMKLGEHEEA 326
A + Y ++ AL+ EA
Sbjct: 825 AGLKPDKAVYHCLMTALLSRATVTEA 850
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 101/239 (42%), Gaps = 1/239 (0%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T +T+ +++ + R + +AL F M+ G + T+N ++ + Q EK ++L
Sbjct: 585 TSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEIL 644
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM + P+ +Y ++ Y A D ++ + + LD TY + K
Sbjct: 645 DEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDE-GLQLDVYTYEALLKACCK 703
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ + A V K+ + ++ YN LI +A G+ E L K +
Sbjct: 704 SGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHT 763
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y + + A K G+ A K+++E E SG + + +I G+ L + A +++
Sbjct: 764 YTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEM 822
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 181/417 (43%), Gaps = 11/417 (2%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
T II+ + N G ++ +D+ G V +I + K+ +A+++ + M
Sbjct: 27 THTPIITAMANAGD-LDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRE 85
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTD 148
+G C + V +D + ++ +A+ + + T+ +L++ + ++ D
Sbjct: 86 RG-CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVD 144
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
A M G+ + +TY+ ++ K+ ++ + +VL EMKA + PD F+Y I
Sbjct: 145 DARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALI 204
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
+ +E E +LR M D Y+S H + K+ + +A L++ ++ +
Sbjct: 205 HGLCKADKIEEAEQMLRRMAGS-GCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRK 263
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKLGEHEEAE 327
D + YN +I LG +E + D ++++ Y T++ L K EA+
Sbjct: 264 SPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQ 323
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
K+L +G + D +I G C G ++ AE +L+ + G A ++ + +G
Sbjct: 324 KLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGL 383
Query: 388 FDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
A K + + M+ + G P+ ++++ L G +++ + V ++
Sbjct: 384 CKARKVDEAERVMEE-----MRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK 435
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 129/282 (45%), Gaps = 4/282 (1%)
Query: 101 HAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMK 158
++ +D + + FL A+ +K T TY AL++ + + ++A R+M
Sbjct: 165 YSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 224
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
G + Y+ I+ + K+G+ + L EM+ + PD +Y I+ +
Sbjct: 225 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 284
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
++IL +M+ ++ D TY++ + K++++ +A +L + + D + Y +
Sbjct: 285 EAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 344
Query: 279 ISLYASLGNKSEV-LRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
I G E L +++ C + Y T++ L K + +EAE+V++E +G
Sbjct: 345 IDGLCKCGRLEEAEYLLQGMKRAGCAPNV-VTYTTLISGLCKARKVDEAERVMEEMRNAG 403
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
+ N ++ G C +G ++ A+ +++ + + +P++
Sbjct: 404 CPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDA 445
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 34/314 (10%)
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
G ++L EMK+ PD F++ I + DL+G LR M P++V T
Sbjct: 4 GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVV----T 59
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
Y + + +A +++A +L++ ER + + YN L+ L S V D+ K
Sbjct: 60 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKL---SMVGAAQDVVK 116
Query: 300 TACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
+ + +T +++ K G ++A K+L G + +A+I G C +
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176
Query: 357 LVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
A+ +LE++ K TP+ +++ + G A K E Q ++ + G G
Sbjct: 177 KFLEAKEVLEEM--KASGVTPDAFTYSALIHGLCKADKIEEAEQMLR-----RMAGSGCT 229
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ-------MYHAFIKANIRNGKG 467
PD V +SI+ G + A +T+ M +Q Y+ I + GK
Sbjct: 230 PDVVVYSSIIHAFCKSGK------LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 283
Query: 468 VDE--LLDSMKADG 479
+ +LD M+ G
Sbjct: 284 AEAQVILDQMQESG 297
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 179/431 (41%), Gaps = 53/431 (12%)
Query: 74 KRKRFSQALEVSDWMNRKGI--CVFAPCDHAVQLDLIGRVHGFLSAESYFS-----NLKD 126
++ +A E+ D M+ KG+ CVF + ++ + + +L A+ +
Sbjct: 144 RQGLLEEAFELMDSMSGKGLKPCVFT---YNAIINGLCKTGKYLRAKGVLDEMLKIGMSP 200
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
D TY L+ C R A F +M G+ ++++ ++ L SK G ++
Sbjct: 201 DTATYNIL--LVEC-CRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 257
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
+MK + PDN Y I I + R+ + + +R+ + VLD TY + +
Sbjct: 258 KYFRDMKNAGLAPDNVIYTILIGGF-CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNG 316
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
K ++ +A ++ + ER D + LI+ Y+ GN ++ + L+++ +R +
Sbjct: 317 LCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM---MIQRNL 373
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWE--LSGNSYDTRIPNAVII-GYCNNGLVQNAEA 363
D +T + + E EKV + W +S Y I ++I GYCN G V A
Sbjct: 374 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 433
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTER-------------------------GF- 397
+ +++VEKG T + + GY AG + GF
Sbjct: 434 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 493
Query: 398 --QCMKAALSVY--VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNR 451
+ M A ++ +E G PD IL+ +G +Q+ E + + R V P +R
Sbjct: 494 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNP-DR 552
Query: 452 QMYHAFIKANI 462
Y + I ++
Sbjct: 553 STYTSLINGHV 563
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 5/265 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N Y RQ ++A M G+ TYN I+ KTG+Y + VL EM
Sbjct: 134 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 193
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD +Y I + ++ E I EM SQ +V D ++++ K
Sbjct: 194 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQ-GVVPDLVSFSALIGLLSKNGC 252
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+D+A + + D + Y LI + G SE L++ D LE+ + Y
Sbjct: 253 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVT--Y 310
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T+L L K EA+++ E G D +I GY +G + A + E +++
Sbjct: 311 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ 370
Query: 371 KGKATTPNSWAVVAAGYFDAGKTER 395
+ ++ + G+ + E+
Sbjct: 371 RNLKPDVVTYNTLIDGFCKGSEMEK 395
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 140/346 (40%), Gaps = 50/346 (14%)
Query: 78 FSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE--KTYQTYG 135
S+AL+V D M +G CV + L+ + + A+ F+ + + + T+
Sbjct: 288 MSEALKVRDEMLEQG-CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFT 346
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
L+N Y + +KA++ F M + + +TYN ++ + K + EKV ++ +M ++
Sbjct: 347 TLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR 406
Query: 196 NIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
I+P++ SY I IN Y G S+ + + E + I+ T + Y +A
Sbjct: 407 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATII----TCNTIVKGYCRAGN 462
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
KA + L + DGI YN T
Sbjct: 463 AVKADEFLSNMLLKGIVPDGITYN-----------------------------------T 487
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ +K + A ++ + E SG D N ++ G+ G +Q AE I+ ++E+G
Sbjct: 488 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 547
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
+++ + G+ + F+ L +G+ PD K
Sbjct: 548 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ-----RGFVPDDK 588
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/350 (18%), Positives = 137/350 (39%), Gaps = 7/350 (2%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++R + ++ + E + KG+CV +++ L+ L+ E Y ++
Sbjct: 33 LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSG 92
Query: 128 -EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
+ T ++N + ++ + S M+E G+ +TYN ++ Y + G E+
Sbjct: 93 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 152
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
+++ M K + P F+Y IN + +L EM + + D +TY
Sbjct: 153 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM-LKIGMSPDTATYNILLVE 211
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
+ + + A + + + D + ++ LI L + G + L+ + K A
Sbjct: 212 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 271
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
N Y ++ + G EA KV E G D N ++ G C ++ A+ +
Sbjct: 272 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFT 331
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
++ E+G ++ + GY G + + + + KPD
Sbjct: 332 EMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ-----RNLKPD 376
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 118/305 (38%), Gaps = 45/305 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+ L+ YV+ R+ + FR +K G+ +S N ++ K G + ++ E+
Sbjct: 29 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 88
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + ++ I IN+ +E + L +ME + + D TY + + Y + L
Sbjct: 89 VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME-EKGVFPDVVTYNTLINAYCRQGL 147
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
L++A E ++ G G + Y ++ N
Sbjct: 148 -------LEEAFELMDSMSGKGLKPCVFTYNAIIN------------------------- 175
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
L K G++ A+ VL E G S DT N +++ C N + +AE I +++ +G
Sbjct: 176 ---GLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 232
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDE 430
S++ + G C+ AL + + K G PD + T ++
Sbjct: 233 VVPDLVSFSALIGLLSKNG-------CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 285
Query: 431 GSVQD 435
G + +
Sbjct: 286 GVMSE 290
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 80/188 (42%), Gaps = 8/188 (4%)
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++L L+K+G + A ++ +E SG + N +I C N ++N ++ L D+ EK
Sbjct: 67 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 126
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G ++ + Y G E F+ M + + GKG KP +I++ L G
Sbjct: 127 GVFPDVVTYNTLINAYCRQGLLEEAFELMDS-----MSGKGLKPCVFTYNAIINGLCKTG 181
Query: 432 SVQDVEAFV-AALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKE 488
+ + L+ + + Y+ + RN +D + D M + G+ D +
Sbjct: 182 KYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFS 241
Query: 489 ILVCTMEK 496
L+ + K
Sbjct: 242 ALIGLLSK 249
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 190/456 (41%), Gaps = 56/456 (12%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAP----CDHAVQLDLIGRVHGFLSAESYFSN 123
++R + + +A+E M KG F P C+H L L+ R++ +A ++++
Sbjct: 162 MVRFYCQLRMVDEAIECFYLMKEKG---FDPKTETCNHI--LSLLSRLNRIENAWVFYAD 216
Query: 124 LKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
+ E T+ ++N ++ + KA M+ GI + +TYN ++ YS G+
Sbjct: 217 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGR 276
Query: 182 YE--------------------------------KVPDVLTEMKAKNIFPDNFSYRICIN 209
E + +VL EMK + PD+ SY I I
Sbjct: 277 IEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGIGLVPDSVSYNILIR 336
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
DLE EM Q +V + TY + H N I+ A ++++ E+
Sbjct: 337 GCSNNGDLETAFAYRDEMVKQ-GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 395
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
D + YN +I+ Y G+ + L D T + Y +++ L + + EA+++
Sbjct: 396 LDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADEL 455
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
++ G D + N ++ G+C G + A ++L+++ ++ + G
Sbjct: 456 FEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCG 515
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IP 448
GK E + M ++ +G KPD +++S +G + AF+ + +
Sbjct: 516 EGKFEEARELMGE-----MKRRGIKPDHISYNTLISGYSKKGDTK--HAFIVRDEMLSLG 568
Query: 449 MNRQM--YHAFIKANIRNGKG--VDELLDSMKADGI 480
N + Y+A +K +N G +ELL MK++GI
Sbjct: 569 FNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGI 604
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 168/412 (40%), Gaps = 32/412 (7%)
Query: 86 DWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQR 145
D+M R C D A++ + + GF D KT +T +L+ R
Sbjct: 160 DFMVR-FYCQLRMVDEAIECFYLMKEKGF------------DPKT-ETCNHILSLLSRLN 205
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
+ + A + M M I + T+N ++ + K G+ +K L M++ I P +Y
Sbjct: 206 RIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYN 265
Query: 206 ICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
+ Y R +EG +I+ EM+S QP D TY + +AS+VL++
Sbjct: 266 TLVQGYSLRGRIEGARMIISEMKSKGFQP----DLQTYNPILSWMCNEG---RASEVLRE 318
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGE 322
+ D + YN LI ++ G+ D Y T++ L +
Sbjct: 319 MKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENK 378
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
E AE +++E G D+ N VI GYC +G + A A+ ++++ G T ++
Sbjct: 379 IEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTS 438
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAA 442
+ KT + + V GKG KPD ++ +++ G++ + +
Sbjct: 439 LIYVLCRRNKTREADELFEK-----VVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKE 493
Query: 443 L-RTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
+ R I + Y+ ++ GK + EL+ MK GI D + L+
Sbjct: 494 MDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 545
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 93/466 (19%), Positives = 202/466 (43%), Gaps = 22/466 (4%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
T II+ + N G ++ +D+ G V +I + K+ +A+++ + M
Sbjct: 149 THTPIITAMANAGD-LDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRE 207
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTD 148
+G C + V +D + ++ +A+ + + T+ +L++ + ++ D
Sbjct: 208 RG-CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVD 266
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
A M G+ + +TY+ ++ K+ ++ + +VL EMK + + PD F+Y I
Sbjct: 267 DARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALI 326
Query: 209 NSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
+ +E E +LR M P +V+ Y+S H + K+ + +A L++ +
Sbjct: 327 HGLCKADKIEEAEQMLRRMAGSGCTPDVVV----YSSIIHAFCKSGKLLEAQKTLQEMRK 382
Query: 266 RLEQKDGIGYNFLISLYASLGNKSEV-LRLWDLEKTACKRYINRDYITMLEALMKLGEHE 324
+ + D + YN +I LG +E + L ++++ Y T++ L K
Sbjct: 383 QRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLV 442
Query: 325 EAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
EA+K+L +G + D +I G C G ++ AE +L+ + G A ++ +
Sbjct: 443 EAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLI 502
Query: 385 AGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL- 443
+G A K + + M+ + G P+ ++++ L G +++ + V +
Sbjct: 503 SGLCKARKVDEAERVMEE-----MRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK 557
Query: 444 --RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEE 485
R + Y + A + + + ++LL+ MK+ + E+
Sbjct: 558 DGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKSTTSSQQEQ 603
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 170/419 (40%), Gaps = 54/419 (12%)
Query: 31 TLYSIISPL--GNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM 88
T+ +I++ L G P + IEP+L + R+ + R++ L+ K AL W
Sbjct: 12 TVTAILNLLHSGRPWSAIEPDLSPFSGASTTPRI--VGRVVNSLKDAKL---ALAFFRW- 65
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTD 148
AP + GF + + FS + +LL VR ++
Sbjct: 66 --------AP----------ASIPGF--SHTAFS-----------WNSLLQVLVRCKKHR 94
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
+A FR +YN ++ + G ++L EMK+ PD F++ I
Sbjct: 95 EAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPII 154
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
+ DL+G LR M P++V TY + + +A +++A +L++ ER
Sbjct: 155 TAMANAGDLDGAMDHLRSMGCDPNVV----TYTALIAAFARAKKLEEAMKLLEEMRERGC 210
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEE 325
+ + YN L+ L S V D+ K + + +T +++ K G ++
Sbjct: 211 PPNLVTYNVLVDALCKL---SMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDD 267
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
A K+L G + +A+I G C + A+ +LE++ +G +++ +
Sbjct: 268 ARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIH 327
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
G A K E Q ++ + G G PD V +SI+ G + + + + +R
Sbjct: 328 GLCKADKIEEAEQMLR-----RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR 381
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 135/322 (41%), Gaps = 16/322 (4%)
Query: 150 ALSHFR--KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
AL+ FR G + + ++N ++ + + ++ + D+ + PD SY I
Sbjct: 59 ALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIV 118
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
I+ + DL +L EM+S D T+ A +D A D L+
Sbjct: 119 ISGFCNAGDLHAALELLEEMKSA-GFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG--- 174
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+ + Y LI+ +A E ++L ++ + C + Y +++AL KL A
Sbjct: 175 CDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNL-VTYNVLVDALCKLSMVGAA 233
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
+ V+K+ G + + N+++ G+C G V +A +L +V KG PN V +
Sbjct: 234 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKG--MRPN--VVTYSA 289
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV--AALR 444
D + F K L ++ +G PD ++++ L +++ E + A
Sbjct: 290 LIDGLCKSQKFLEAKEVLE-EMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS 348
Query: 445 TVIPMNRQMYHAFIKANIRNGK 466
P + +Y + I A ++GK
Sbjct: 349 GCTP-DVVVYSSIIHAFCKSGK 369
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 148/337 (43%), Gaps = 19/337 (5%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
Q LLN V++R TD F+KM ++G+ + YN ++ SK+G EK +L+E
Sbjct: 169 QACTVLLNSLVKERLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSE 228
Query: 192 MKAKNIFPDNFSYRICINSYGARS-DLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
M+ K +FPD F+Y I+ Y +S E + + ++ + + D TY S H + +
Sbjct: 229 MEEKGVFPDIFTYNTLISVYCKKSMHFEALSV--QDRMERSGVAPDIVTYNSLIHGFSRE 286
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL--EKTACKRYINR 308
+ +A+ + +K + + + + Y LI Y + + E LRL ++ + C +
Sbjct: 287 GRMREATRLFRKIKG-VVMANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVT- 344
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++L L + G EA ++L E + D N +I YC + +A + + +
Sbjct: 345 -YNSILRKLCEDGRIREANRLLTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM 403
Query: 369 VEKGKATTPNSWAVVAAGY-----FDAGK------TERGFQCMKAALSVYVEGKGWKPDP 417
+E G S+ + G+ D K E+G +A S V+G +
Sbjct: 404 IESGLKLDMYSYKALIHGFCKVLELDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNKQ 463
Query: 418 KVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMY 454
IT + + G DV + +R + + + Y
Sbjct: 464 DEITKLPEEFEKRGLCPDVALYRGLIRRICKLEQVDY 500
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 125/327 (38%), Gaps = 50/327 (15%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGF------LSAESYFSNLKDD 127
K+ +AL V D M R G+ AP D LI HGF A F +K
Sbjct: 250 KKSMHFEALSVQDRMERSGV---AP-DIVTYNSLI---HGFSREGRMREATRLFRKIKGV 302
Query: 128 -EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
+ TY L++ Y R D+AL M+ G +TYN I+ + G+ +
Sbjct: 303 VMANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREAN 362
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
+LTEM K I PDN + IN+Y D+ + ++M + + LD +Y + H
Sbjct: 363 RLLTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM-IESGLKLDMYSYKALIHG 421
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
+ K +D A + L +E+ GY+
Sbjct: 422 FCKVLELDNAKEELFSM---IEKGLSPGYS------------------------------ 448
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y +++ + +E K+ +E+E G D + +I C V A+ + E
Sbjct: 449 --AYSWLVDGFYNQNKQDEITKLPEEFEKRGLCPDVALYRGLIRRICKLEQVDYAKVLFE 506
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKT 393
+ +KG + +A Y+ GK
Sbjct: 507 SMEKKGLMGDSVIYTTMAYAYWRTGKV 533
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 186/450 (41%), Gaps = 55/450 (12%)
Query: 80 QALEVSDWMNRKGI--CVFAPCDHAVQLDLIGRVHGFLSAESYFS-----NLKDDEKTYQ 132
+A E+ D M+ KG+ CVF + ++ + + +L A+ + D TY
Sbjct: 307 EAFELMDSMSGKGLKPCVFT---YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 363
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
L+ C R A F +M G+ ++++ ++ L SK G ++ +M
Sbjct: 364 IL--LVEC-CRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 420
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PDN Y I I + R+ + + +R+ + VLD TY + + K +
Sbjct: 421 KNAGLAPDNVIYTILIGGF-CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ +A ++ + ER D + LI+ Y+ GN ++ + L+++ +R + D +T
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM---MIQRNLKPDVVT 536
Query: 313 MLEALMKLGEHEEAEKVLKEWE--LSGNSYDTRIPNAVII-GYCNNGLVQNAEAILEDLV 369
+ + E EKV + W +S Y I ++I GYCN G V A + +++V
Sbjct: 537 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 596
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTER-------------------------GF---QCMK 401
EKG T + + GY AG + GF + M
Sbjct: 597 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMD 656
Query: 402 AALSVY--VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAF 457
A ++ +E G PD IL+ +G +Q+ E + + R V P +R Y +
Sbjct: 657 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNP-DRSTYTSL 715
Query: 458 IKANI--RNGKGVDELLDSMKADGIDEDEE 485
I ++ N K + D M G D++
Sbjct: 716 INGHVTQNNLKEAFRVHDEMLQRGFVPDDK 745
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 5/265 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N Y RQ ++A M G+ TYN I+ KTG+Y + VL EM
Sbjct: 291 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 350
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD +Y I + ++ E I EM SQ +V D ++++ K
Sbjct: 351 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQ-GVVPDLVSFSALIGLLSKNGC 409
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+D+A + + D + Y LI + G SE L++ D LE+ + Y
Sbjct: 410 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVT--Y 467
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T+L L K EA+++ E G D +I GY +G + A + E +++
Sbjct: 468 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ 527
Query: 371 KGKATTPNSWAVVAAGYFDAGKTER 395
+ ++ + G+ + E+
Sbjct: 528 RNLKPDVVTYNTLIDGFCKGSEMEK 552
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 140/346 (40%), Gaps = 50/346 (14%)
Query: 78 FSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE--KTYQTYG 135
S+AL+V D M +G CV + L+ + + A+ F+ + + + T+
Sbjct: 445 MSEALKVRDEMLEQG-CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFT 503
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
L+N Y + +KA++ F M + + +TYN ++ + K + EKV ++ +M ++
Sbjct: 504 TLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR 563
Query: 196 NIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
I+P++ SY I IN Y G S+ + + E + I+ T + Y +A
Sbjct: 564 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATII----TCNTIVKGYCRAGN 619
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
KA + L + DGI YN T
Sbjct: 620 AVKADEFLSNMLLKGIVPDGITYN-----------------------------------T 644
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ +K + A ++ + E SG D N ++ G+ G +Q AE I+ ++E+G
Sbjct: 645 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 704
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
+++ + G+ + F+ L +G+ PD K
Sbjct: 705 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ-----RGFVPDDK 745
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/350 (18%), Positives = 137/350 (39%), Gaps = 7/350 (2%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++R + ++ + E + KG+CV +++ L+ L+ E Y ++
Sbjct: 190 LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSG 249
Query: 128 -EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
+ T ++N + ++ + S M+E G+ +TYN ++ Y + G E+
Sbjct: 250 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 309
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
+++ M K + P F+Y IN + +L EM + + D +TY
Sbjct: 310 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM-LKIGMSPDTATYNILLVE 368
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
+ + + A + + + D + ++ LI L + G + L+ + K A
Sbjct: 369 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 428
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
N Y ++ + G EA KV E G D N ++ G C ++ A+ +
Sbjct: 429 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFT 488
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
++ E+G ++ + GY G + + + + KPD
Sbjct: 489 EMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ-----RNLKPD 533
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 116/293 (39%), Gaps = 46/293 (15%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L+ YV+ R+ + FR +K G+ +S N ++ K G + ++ E+
Sbjct: 187 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 246
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ + ++ I IN+ +E + L +ME + + D TY + + Y + L
Sbjct: 247 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME-EKGVFPDVVTYNTLINAYCRQGL- 304
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
L++A E ++ G G + Y ++ N
Sbjct: 305 ------LEEAFELMDSMSGKGLKPCVFTYNAIIN-------------------------- 332
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
L K G++ A+ VL E G S DT N +++ C N + +AE I +++ +G
Sbjct: 333 --GLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGV 390
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSIL 424
S++ + G C+ AL + + K G PD VI +IL
Sbjct: 391 VPDLVSFSALIGLLSKNG-------CLDQALKYFRDMKNAGLAPD-NVIYTIL 435
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 80/188 (42%), Gaps = 8/188 (4%)
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++L L+K+G + A ++ +E SG + N +I C N ++N ++ L D+ EK
Sbjct: 224 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 283
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G ++ + Y G E F+ M + + GKG KP +I++ L G
Sbjct: 284 GVFPDVVTYNTLINAYCRQGLLEEAFELMDS-----MSGKGLKPCVFTYNAIINGLCKTG 338
Query: 432 SVQDVEAFV-AALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKE 488
+ + L+ + + Y+ + RN +D + D M + G+ D +
Sbjct: 339 KYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFS 398
Query: 489 ILVCTMEK 496
L+ + K
Sbjct: 399 ALIGLLSK 406
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 196/448 (43%), Gaps = 24/448 (5%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L +K G + + +I L K F+QALE+ D M +G C + ++ +
Sbjct: 149 LAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARG-CQPDVYTYTTIINGLC 207
Query: 110 RVHGFLSAESYFSNLKD--DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
++ +A + + + TY L++ + R ++AL F MK GI+ + +
Sbjct: 208 KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVV 267
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY---GARSDLEGMEIIL 224
+Y ++ ++++ +L EM + NI PD ++ + I+ + G + +G+ +
Sbjct: 268 SYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTM 327
Query: 225 REMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
EM +P+++ TY S H Y + +A + R + D Y+ LI+ Y
Sbjct: 328 TEMGVEPNVI----TYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCM 383
Query: 285 LGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
+ E +L++ Y T++ A +LG+ EA ++ K+ +G D
Sbjct: 384 VKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCT 443
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKA 402
+ ++ G+C G + A + + +G PN + ++ +G + + +
Sbjct: 444 YSVLLEGFCKQGYLGKAFRLFRAM--QGTYLKPNLVMYTILIDSMCKSGNLNHARK-LFS 500
Query: 403 ALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKAN 461
L V+ G +PD ++ T+I++ L EG + + +EAF P N Y+ I+
Sbjct: 501 ELFVH----GLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGF 556
Query: 462 IRN---GKGVDELLDSMKADGIDEDEET 486
+++ + V +L+ M+ G DE T
Sbjct: 557 LQHKDESRAV-QLIGEMRDKGFVADEGT 583
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 131/319 (41%), Gaps = 18/319 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T L+NC+ + D S K+ ++G+ + +T+ ++ K G++ + ++ +M
Sbjct: 128 TLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDM 187
Query: 193 KAKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
A+ PD ++Y IN G + G+ + E+ QP +V TY++ K
Sbjct: 188 VARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVV----TYSTLIDSLCK 243
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
L+++A D+ + + + Y LI S E + + E T+ I D
Sbjct: 244 DRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLN-EMTSLN--IMPD 300
Query: 310 YIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+T +++ K G EA+ VLK G + N+++ GY V A + +
Sbjct: 301 IVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFD 360
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
++ +G S++++ GY + + Q + +G P+ T+++
Sbjct: 361 VMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIH-----QGLTPNTVSYTTLIHA 415
Query: 427 LGDEGSVQDVEAFVAALRT 445
G +++ + T
Sbjct: 416 FCQLGKLREARELFKDMHT 434
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 138/316 (43%), Gaps = 12/316 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T L+N + +Q + D+ALS ++ G TYN ++ K G + +V+ M
Sbjct: 275 TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAM 334
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
+ PD ++Y I+ ++E IL +M S+ P+ V TY + K
Sbjct: 335 LLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAV----TYNAIISSLCK 390
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
N +D+A+++ + + D +N LI N + L++ K R
Sbjct: 391 ENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFT 450
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++++L + EEA +LKE EL+G + + I N +I G+C N ++ AE I +++
Sbjct: 451 YNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEME 510
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+G + ++ + G + + E Q M + +G +PD S+L+
Sbjct: 511 LQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIM-----EGLRPDKFTYNSLLTHFCK 565
Query: 430 EGSVQDVEAFVAALRT 445
G ++ V + +
Sbjct: 566 TGDIKKAADIVQTMTS 581
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 118/280 (42%), Gaps = 1/280 (0%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
+D TY A+++ ++ + D+A R + GI T+N ++ + ++
Sbjct: 372 RDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKS 431
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
D+ EMK K PD F+Y + I+S + LE +L+EME + Y +
Sbjct: 432 AMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELN-GCARNVVIYNTLI 490
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
+ K I++A ++ + E + +D + YN LI + +L D R
Sbjct: 491 DGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLR 550
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y ++L K G+ ++A +++ SG + D +I G C G VQ A +
Sbjct: 551 PDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRL 610
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
L + KG TP+++ V F +T + + L
Sbjct: 611 LRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREML 650
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 134/332 (40%), Gaps = 25/332 (7%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGI----CVF--------APCDHAVQLDLIGRVHGFL 115
II L K R +A E++ + KGI C F +H +DL + G
Sbjct: 384 IISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKG-- 441
Query: 116 SAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCL 175
+ DE TY L++ R+ ++AL+ ++M+ G A + + YN ++
Sbjct: 442 ------KGCRPDEFTYNM---LIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDG 492
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVL 235
+ K + E+ ++ EM+ + + D+ +Y I+ +E ++ +M + +
Sbjct: 493 FCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIME-GLRP 551
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
D TY S + K I KA+D+++ D + Y LIS G RL
Sbjct: 552 DKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLL 611
Query: 296 DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN- 354
+ Y +++AL K EA ++ +E D V G CN
Sbjct: 612 RSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNG 671
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
G + A +++E+G +S+ ++A G
Sbjct: 672 GGPIGEAVDFTVEMIERGNIPEFSSFVMLAEG 703
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 166/453 (36%), Gaps = 25/453 (5%)
Query: 52 NWV-KNGNKVRVGEL-QRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
NW K N V + + I+R L K F V + M G C F D + L +
Sbjct: 85 NWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSG-CEF---DRGIFLIFVE 140
Query: 110 RVHGFLSAESYFSNLKDDEKTYQT------YGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
F + +K E Y+ Y LLN V + S M I
Sbjct: 141 SYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIR 200
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII 223
T+N ++ K Q ++ EM + + PD ++ + Y +L+G I
Sbjct: 201 HDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRI 260
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
+M D T + + K ID+A +++A + D YN L++
Sbjct: 261 KEQMVEYGCPCTDV-TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLC 319
Query: 284 SLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
+G+ + + D Y +++ L KLGE EEA K+L + S +
Sbjct: 320 KIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAV 379
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAA 403
NA+I C V A I L KG ++ + G + K+A
Sbjct: 380 TYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNH-------KSA 432
Query: 404 LSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKA 460
+ ++ E GKG +PD ++ L +++ + + N +Y+ I
Sbjct: 433 MDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDG 492
Query: 461 NIRNGK--GVDELLDSMKADGIDEDEETKEILV 491
+N + +E+ D M+ G+ D T L+
Sbjct: 493 FCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLI 525
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 114/303 (37%), Gaps = 43/303 (14%)
Query: 144 QRQTDK--ALSHFR-KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD 200
+RQTD+ AL F K+ S+ Y +I+ K G +E + VL EMK D
Sbjct: 72 RRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFD 131
Query: 201 NFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVL 260
+ I + SYG + + I++ ME + I D Y + + AN +
Sbjct: 132 RGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAH 191
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKL 320
R + D +N LI K CK + R I M+E
Sbjct: 192 SSMVRRRIRHDVSTFNILI-------------------KALCKAHQVRPAILMME----- 227
Query: 321 GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
E G S D ++ GY G + A I E +VE G T +
Sbjct: 228 -----------EMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTV 276
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
V+ G+ G+ ++ ++ A+S +G++PD ++++ L G + V
Sbjct: 277 NVLINGFCKQGRIDQALSFIQEAVS-----EGFRPDQFTYNTLVNGLCKIGHAKHAMEVV 331
Query: 441 AAL 443
A+
Sbjct: 332 DAM 334
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 155/363 (42%), Gaps = 11/363 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y ++N Y R + DK MK G+ ++ Y I+ L + + + + +EM
Sbjct: 726 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 785
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ I PD Y I+ + R D+ EM S+ I D TY + + +
Sbjct: 786 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGD 844
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYI 311
+ +A + + + + D + + LI+ Y G+ + R+ + + + C + Y
Sbjct: 845 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV-VTYT 903
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T+++ L K G+ + A ++L E G + N+++ G C +G ++ A ++ +
Sbjct: 904 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 963
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G ++ + Y +G+ ++ + +K L GKG +P +++ G
Sbjct: 964 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEML-----GKGLQPTIVTFNVLMNGFCLHG 1018
Query: 432 SVQDVEAFVA-ALRTVIPMNRQMYHAFIKA-NIRNG-KGVDELLDSMKADGIDEDEETKE 488
++D E + L I N +++ +K IRN K + M + G+ D +T E
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 1078
Query: 489 ILV 491
LV
Sbjct: 1079 NLV 1081
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 1/212 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++N + ++A+ + + G+ T+TY +M Y K+G+ +K ++L EM
Sbjct: 936 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P ++ + +N + LE E +L M ++ I + +T+ S Y N
Sbjct: 996 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNN 1054
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A+ + K R DG Y L+ + N E L+ K Y
Sbjct: 1055 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 1114
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
+++ +K + EA +V + G + D I
Sbjct: 1115 LIKGFLKRKKFLEAREVFDQMRREGLAADKEI 1146
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 127/308 (41%), Gaps = 33/308 (10%)
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCL-YSKTGQYEKVPDVLTEM--------KAKNIFPDN 201
+S F + ++ + S + + D++ Y G +V DV ++ +A+ +F
Sbjct: 585 ISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKM 644
Query: 202 FSYRICI-----NSYGARSDLEGME-----IILREMESQPHIVLDW--STYASAAHFYIK 249
+Y + + N Y R + + I+ RE P + + W ++Y HF +
Sbjct: 645 LNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF---PEVGVCWNVASYNIVIHFVCQ 701
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
I +A +L E + D I Y+ +++ Y G +V +L ++ K + +
Sbjct: 702 LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 761
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ L ++ + EAE+ E G DT + +I G+C G ++ A ++
Sbjct: 762 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM- 820
Query: 370 EKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ TP+ ++ + +G+ G + KG +PD T +++
Sbjct: 821 -HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-----KGLEPDSVTFTELINGY 874
Query: 428 GDEGSVQD 435
G ++D
Sbjct: 875 CKAGHMKD 882
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 151/341 (44%), Gaps = 17/341 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +LL R + A + F +M I +YN ++ K GQ + ++L +M
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K I P+ SY I+ + + + EM I LD +Y + Y K
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL-GIALDRVSYNTLLSIYTKVGR 459
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
++A D+L++ +KD + YN L+ Y G EV +++ K Y T
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYST 519
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ K G ++EA ++ +E++ +G D + +A+I C NGLV +A ++++++ ++G
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 373 KATTPNSWAVVAAGYFDAGKTER--------GFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+ ++ + + + +R +ALS E +G + + +
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNR-----VIQLF 634
Query: 425 SKLGDEG---SVQDVEAFVAALRTVIPMNRQMYHAFIKANI 462
+L E + +D E + L ++ + R+M+ IK N+
Sbjct: 635 GQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNV 675
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 147/341 (43%), Gaps = 24/341 (7%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG-QYEKVPDV 188
T + AL++ Y R ++A+S F MKE G+ + +TYN ++ K G ++++V
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 189 LTEMKAKNIFPDNFSYRICINSYGA---RSDL-EGMEIILREMESQPHIVLDWSTYASAA 244
EM+ + PD RI NS A R L E + EM ++ I D +Y +
Sbjct: 327 FDEMQRNGVQPD----RITFNSLLAVCSRGGLWEAARNLFDEMTNR-RIEQDVFSYNTLL 381
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K +D A ++L + + + + Y+ +I +A G E L L+ +
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y T+L K+G EEA +L+E G D NA++ GY G + +
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 365 LEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKPDPKVI 420
++ K + PN +++ + GY G K A+ ++ E K G + D +
Sbjct: 502 FTEM--KREHVLPNLLTYSTLIDGYSKGG-------LYKEAMEIFREFKSAGLRADVVLY 552
Query: 421 TSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKA 460
++++ L G V + + + + I N Y++ I A
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+K TY ALL Y +Q + D+ F +MK + + LTY+ ++ YSK G Y++ +
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
+ E K+ + D Y I++ ++ L G + L + ++ I + TY S +
Sbjct: 536 IFREFKSAGLRADVVLYSALIDAL-CKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Query: 248 IKANLIDKASD 258
++ +D+++D
Sbjct: 595 GRSATMDRSAD 605
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 197/469 (42%), Gaps = 59/469 (12%)
Query: 61 RVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRV--HGFLSAE 118
RV E ++ + + K+ + VS +N G+C+ A L LI R+ +GF E
Sbjct: 184 RVSEAVALVDRMVEMKQRPDLVTVSTLIN--GLCLKGRVSEA--LVLIDRMVEYGFQPDE 239
Query: 119 SYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
TYG +LN + + AL FRKM+E I S + Y+ ++ K
Sbjct: 240 V-------------TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 286
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
G ++ + EM+ K I D +Y I + +LREM + +I+ D
Sbjct: 287 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVV 345
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
T+++ ++K + +A ++ + R D I YN LI + E +++DL
Sbjct: 346 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 405
Query: 299 KT-ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
+ C+ I Y ++ + K ++ ++ +E G +T N +++G+C +G
Sbjct: 406 VSKGCEPDI-VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 464
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC--------MKAALSVY-- 407
+ A+ + +++V +G + ++ ++ G D G+ + + M + +Y
Sbjct: 465 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 524
Query: 408 --------------------VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT-- 445
+ KG KPD ++ L +GS+ + + ++
Sbjct: 525 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 584
Query: 446 VIPMNRQMYHAFIKANIRNGKGV---DELLDSMKADGIDEDEETKEILV 491
P + Y+ I+A++ G G+ EL++ MK G D T ++++
Sbjct: 585 CTP-DDFTYNILIRAHL-GGSGLISSVELIEEMKVCGFSADSSTIKMVI 631
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 148/381 (38%), Gaps = 54/381 (14%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---CLYSKTGQYEK 184
E T ++NCY R+++ A S + ++G T+T++ ++ CL + +
Sbjct: 131 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA 190
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMES--QPHIVLDWSTYA 241
+ D + EMK + PD + IN + + E + +I R +E QP D TY
Sbjct: 191 LVDRMVEMKQR---PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQP----DEVTYG 243
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL------- 294
+ K+ A D+ +K EER + + Y+ +I G+ + L L
Sbjct: 244 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 303
Query: 295 ---------------------WDLEKTACKRYINRDYI-------TMLEALMKLGEHEEA 326
WD + I R+ I +++ +K G+ EA
Sbjct: 304 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 363
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
+++ E G + DT N++I G+C + A + + +V KG +++++
Sbjct: 364 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 423
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-EAFVAALRT 445
Y A + + G + + + KG P+ +++ G + E F +
Sbjct: 424 YCKAKRVDDGMRLFRE-----ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 478
Query: 446 VIPMNRQMYHAFIKANIRNGK 466
+P + Y + NG+
Sbjct: 479 GVPPSVVTYGILLDGLCDNGE 499
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 141/354 (39%), Gaps = 19/354 (5%)
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
+ + A+ F M + + + +N + ++T QY+ V M+ I D ++
Sbjct: 79 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138
Query: 206 ICINSYGARSDLE-GMEIILR--EMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
I IN Y + L ++ R ++ +P D T+++ + + + +A ++ +
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEP----DTITFSTLVNGFCLEGRVSEAVALVDR 194
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGE 322
E ++ D + + LI+ G SE L L D + Y +L L K G
Sbjct: 195 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 254
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
A + ++ E + VI C +G +A ++ ++ KG +++
Sbjct: 255 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 314
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAA 442
+ G + GK + G + ++ + G+ PD ++++ EG + + +
Sbjct: 315 LIGGLCNDGKWDDGAKMLREMI-----GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 369
Query: 443 L--RTVIP---MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
+ R + P + F K N + +++ D M + G + D T IL+
Sbjct: 370 MITRGIAPDTITYNSLIDGFCKENCLH--EANQMFDLMVSKGCEPDIVTYSILI 421
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 184/434 (42%), Gaps = 57/434 (13%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK-- 125
+I + K KR +A + + M R G+ A+ +D + R F A + F +
Sbjct: 265 LIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSAL-VDGLCRDGRFSEAYALFREMDKI 323
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+ TY ++ + ++ +++L +M G+A+ + Y +M K G+ E+
Sbjct: 324 GVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEA 383
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYAS 242
DVL + NI P+ +Y + ++++ +++G E +L +ME + P++V T++S
Sbjct: 384 KDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVV----TFSS 439
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
+ +K I KA+ ++K ++ GI N +
Sbjct: 440 ILNGLVKRGCIAKAAGYMRKMKD-----SGIAPNVV------------------------ 470
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
Y T+++ K E A V ++ G + I ++++ G NG ++ AE
Sbjct: 471 ------TYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAE 524
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVI 420
A+ +D+ E+G ++A + G F G M AAL V E + PD V
Sbjct: 525 ALFKDMGERGLLLDHVNYATLMDGLFKTGN-------MPAALKVGQELMERNLSPDAVVY 577
Query: 421 TSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKA 477
++ L G + ++F+ +R T + ++ Y+ I A R G +LL+ MK
Sbjct: 578 NVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKW 637
Query: 478 DGIDEDEETKEILV 491
I + T LV
Sbjct: 638 SSIKPNLITYTTLV 651
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 157/387 (40%), Gaps = 28/387 (7%)
Query: 113 GFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK--EMGIALSTLTYN 170
G ++A S F + D T + ++ Y ALS R + +A T++YN
Sbjct: 65 GLVAAASRFRPVPGDPLTLNS---IILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYN 121
Query: 171 DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
+ S+ G P VL+EM + + D + + +R+ L G L EM +
Sbjct: 122 IFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGL-SRTGLVGEAAALAEMLVR 180
Query: 231 PH-----IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
V+ W+ Y K + A V+++ + D +GYN L++ +
Sbjct: 181 GRGIDGLGVVGWNALIDG---YCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYS 237
Query: 286 GNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
G+ + + K + T++ K+ EEA + + SG D
Sbjct: 238 GDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTL 297
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA-GKTERGFQCMKAAL 404
+A++ G C +G A A+ ++ + G A PN V + D+ K +R + +L
Sbjct: 298 SALVDGLCRDGRFSEAYALFREMDKIGVA--PNH--VTYCTFIDSLAKVQR----VNESL 349
Query: 405 SVYVE--GKGWKPDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKAN 461
+ E +G D + T+++ +LG EG +++ + AL I N Y + A+
Sbjct: 350 GLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAH 409
Query: 462 IRNGK--GVDELLDSMKADGIDEDEET 486
R G G +++L M+ + + T
Sbjct: 410 CRAGNIDGAEQMLLQMEEKSVSPNVVT 436
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 152/391 (38%), Gaps = 44/391 (11%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L++ + AL +++ E ++ + YN + + G++ + L EM+
Sbjct: 542 YATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMR 601
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIKA 250
+ PD +Y I++ + +L EM+ +P+++ TY + ++A
Sbjct: 602 NTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLI----TYTTLVVGLLEA 657
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE--VLRLWDLEKTACKRYINR 308
+++KA +L + + Y + L A G++S +L + +L A
Sbjct: 658 GVVEKAKYLLNEMASAGFTPTPLTYRRV--LQACSGSRSPYVILEVHELMMGAGLHADIT 715
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y T++ L G +A VL E G + DT NA+I+G+C + + NA A +
Sbjct: 716 VYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQM 775
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERG--FQC-MKA----------------------- 402
+ +G + ++ + G AG+ C MK
Sbjct: 776 LHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNK 835
Query: 403 --ALSVYVE--GKGWKPDPKVITSILSKLGDEGSV-QDVEAFVAALRTVIPMNRQMYHAF 457
AL +Y E KG+ P S++S G + Q E F R + Y
Sbjct: 836 VEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDIL 895
Query: 458 IK--ANIRNGKGVDELLDSMKADGIDEDEET 486
+ + +RNG V LL MK G + T
Sbjct: 896 LNGWSKLRNGTEVRILLKDMKELGFKPSKGT 926
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 147/356 (41%), Gaps = 27/356 (7%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ AL++ Y + + AL+ +M G++L + YN ++ + +G + +V MK
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMK 251
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
A + P ++ I Y +E L E + ++ D T ++ +
Sbjct: 252 ADGVEPSVVTHTTLIGEYCKMKRIE-EAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRF 310
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---Y 310
+A + ++ ++ + + Y I A + +E L L R + D Y
Sbjct: 311 SEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLG---EMVSRGVAMDLVMY 367
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII-GYCNNGLVQNAEAILEDLV 369
T+++ L K G+ EEA+ VL+ LS N + V++ +C G + AE +L +
Sbjct: 368 TTVMDRLGKEGKIEEAKDVLRH-ALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQME 426
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E K+ +PN VV G +RG C+ A + K P V+T
Sbjct: 427 E--KSVSPN---VVTFSSILNGLVKRG--CIAKAAGYMRKMKDSGIAPNVVT-------- 471
Query: 430 EGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEE 485
G++ D + + R M H ++A N VD L++ ++ +G E+ E
Sbjct: 472 YGTLIDGFFKCQGQEAALDVYRDMLHEGVEA---NNFIVDSLVNGLRKNGNIEEAE 524
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 49/101 (48%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E TY L+ Y ++ +AL + +M G TYN ++ ++K G + +
Sbjct: 816 EPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKE 875
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
+ +EMK + + + +Y I +N + + + I+L++M+
Sbjct: 876 LFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMK 916
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 135/277 (48%), Gaps = 14/277 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG---RVHGFLSAESYFSNL 124
+I + + + S A +V D ++++G+ C+ LIG R AE +
Sbjct: 218 LITEYCRDGKLSLAFKVFDEISKRGV----ACNAVTYNILIGGLCRKGQVSKAEGLLERM 273
Query: 125 KDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
K T +T+ L++ Q DKALS+ K+K +G+ + +TYN ++ +SK G
Sbjct: 274 KRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNS 333
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
V +++ EM+ + I P +Y I +N++ D+E + M+ + +V D TY
Sbjct: 334 SVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMK-RIGLVPDQHTYGV 392
Query: 243 AAH-FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKT 300
H IK N+++ AS + K E Q + + YN +I+ Y N + L+ L ++ K
Sbjct: 393 LIHGLCIKGNMVE-ASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKN 451
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
+ YI+ ++ L K G+ EA+++LKE +G
Sbjct: 452 GVTPNV-ASYISTIQILCKDGKSIEAKRLLKEMTEAG 487
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 156/367 (42%), Gaps = 64/367 (17%)
Query: 108 IGRVHGFLS--AESYF-------SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
IG V+ FLS SYF NL + + A++N ++ + +++L F+ M
Sbjct: 6 IGFVYPFLSNRITSYFFTISSTQRNLNSESVCGRPRDAVINASLQSQLLEQSLDGFKLMV 65
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL- 217
G + S+ ++N+ + L +K+G ++ TE + F D +S+ I I ++ ++
Sbjct: 66 LKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQF-DVYSFWITIKAFCENGNVS 124
Query: 218 EGMEII--LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE---------- 265
+G E++ + M P++ + Y + ID+A + + ++
Sbjct: 125 KGFELLAQMETMGVSPNVFI----YTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIY 180
Query: 266 ---------RLEQKDGI----------------GYNFLISLYASLGNKSEVLRLWDLEKT 300
+ +KDG YN LI+ Y G S +++D
Sbjct: 181 TIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFD---E 237
Query: 301 ACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
KR + + +T ++ L + G+ +AE +L+ + + + TR N ++ G CN G
Sbjct: 238 ISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQ 297
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP 417
+ A + LE L G T ++ ++ +G+ G + + + L +E +G P
Sbjct: 298 LDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSS-----VVSELVREMEDRGISPS- 351
Query: 418 KVITSIL 424
KV +IL
Sbjct: 352 KVTYTIL 358
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 15/259 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+ Y R + A F ++ + G+A + +TYN ++ + GQ K +L M
Sbjct: 214 TYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM 273
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIK 249
K +I P ++ + ++ L+ L +++ P +V TY + K
Sbjct: 274 KRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLV----TYNILISGFSK 329
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
S+++++ E+R + Y L++ + + + ++ L K
Sbjct: 330 VGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHT 389
Query: 310 YITMLEALMKLGEHEEAEKVLK---EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y ++ L G EA K+ K E L N I N +I GYC A LE
Sbjct: 390 YGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDV---IYNTMINGYCKECNSYKALKFLE 446
Query: 367 DLVEKGKATTPNSWAVVAA 385
++V+ G TPN + ++
Sbjct: 447 EMVKNG--VTPNVASYIST 463
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/478 (20%), Positives = 201/478 (42%), Gaps = 53/478 (11%)
Query: 58 NKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH--AVQLDLIGRVHGFL 115
NK+ + + + ++ +R + ++L + +M R+ C P +H + + ++GR
Sbjct: 106 NKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWC--KPNEHIYTIMIGVLGREGLLE 163
Query: 116 SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
+ F + + ++ AL+N Y R Q +L +MK+ ++ S LTYN ++
Sbjct: 164 KCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVI 223
Query: 174 CLYSKTG-QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH 232
++ G +E++ + +M+ + I D +Y +++ R + E++ R M ++
Sbjct: 224 NSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTM-NEGG 282
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
I+ D +TY+ + K N ++K S++LK+ E D YN L+ +A G+ E +
Sbjct: 283 ILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAM 342
Query: 293 RLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN-----SYDTRI--- 344
++ + A Y +L + G +++ + E ++S +Y+ I
Sbjct: 343 GVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVF 402
Query: 345 ----------------------PN-----AVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
PN +I GL ++A+ IL + EKG +
Sbjct: 403 GEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSS 462
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
++ V Y A E V G KP + S++ G ++ E
Sbjct: 463 KAYTGVIEAYGQAALYEEALVAFNTMNEV-----GSKPTVETYNSLIQMFAKGGLYKESE 517
Query: 438 AFVAAL-RTVIPMNRQMYHAFIKANIRNGKGVDELLDS---MKADGIDEDEETKEILV 491
A + + ++ + NR ++ I+A R G +E + + M+ D DE+T E ++
Sbjct: 518 AILLKMGQSGVARNRDTFNGVIEA-FRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVL 574
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 126/305 (41%), Gaps = 40/305 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y LL + + +A+ FR+M+ G + TY+ ++ LY + G+Y+ V D+ EM
Sbjct: 324 SYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEM 383
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPH----------------- 232
K N P+ +Y I IN +G + + + +M +P+
Sbjct: 384 KVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLH 443
Query: 233 --------------IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+V Y Y +A L ++A E + YN L
Sbjct: 444 EDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSL 503
Query: 279 ISLYASLG--NKSEVLRLWDLEKTACKRYINRD-YITMLEALMKLGEHEEAEKVLKEWEL 335
I ++A G +SE + L + ++ R NRD + ++EA + G+ EEA K E E
Sbjct: 504 IQMFAKGGLYKESEAI-LLKMGQSGVAR--NRDTFNGVIEAFRQGGQFEEAIKAYVEMEK 560
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
+ D + AV+ YC GLV+ +E ++ G + + ++ A Y A + +
Sbjct: 561 ARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDD 620
Query: 396 GFQCM 400
Q +
Sbjct: 621 AHQLL 625
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 108/249 (43%), Gaps = 7/249 (2%)
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD--DEKTYQTYGALLNCYVRQR 145
MN KG+ + V ++ G+ + A F+ + + + T +TY +L+ + +
Sbjct: 453 MNEKGVVPSSKAYTGV-IEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGG 511
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
++ + KM + G+A + T+N ++ + + GQ+E+ EM+ PD +
Sbjct: 512 LYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLE 571
Query: 206 ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA-E 264
++ Y +E E E+++ I+ Y Y KA+ D A +L +
Sbjct: 572 AVLSVYCFAGLVEESEEQFGEIKAL-GILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFT 630
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKLGEH 323
R+ + + Y N V +++ L+ C + R Y T+LEAL LG+
Sbjct: 631 NRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGV-RFYNTLLEALWWLGQK 689
Query: 324 EEAEKVLKE 332
E A +VL E
Sbjct: 690 ERATRVLNE 698
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 181/408 (44%), Gaps = 28/408 (6%)
Query: 105 LDLIGRVHGFLSAESYFSNLKD----DEKTY--QTYGALLNCYVRQRQTDKALSHFRKMK 158
++L+ R+ G S S S L D D+ + + Y +L+ Y R + ++A++ F KM
Sbjct: 177 VELMARILGRESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMN 236
Query: 159 EMGIALSTLTYNDIMCLYSKTGQ-YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL 217
E G++ + +TYN ++ +Y K G+ + K+ +L EM++K + D F+ I++ G L
Sbjct: 237 ESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLL 296
Query: 218 EGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
+ + ++SQ P V TY + + KA + +A ++K+ E+ D +
Sbjct: 297 DEAKEFFVGLKSQGYAPGTV----TYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVT 352
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
YN L++ Y G E L D + Y TM+ A + + ++A + + +
Sbjct: 353 YNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMK 412
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK-- 392
SG + + NA++ + IL D+ G A +W + + + G
Sbjct: 413 ESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHK 472
Query: 393 -TERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA-FVAALRTVIPMN 450
+R FQ MK+ G++PD ++++ G GS D E + L +
Sbjct: 473 YVKRVFQEMKSC--------GFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPS 524
Query: 451 RQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILVCTMEK 496
Y+A + A R G + + ++ MK G E + +++ + K
Sbjct: 525 VATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAK 572
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 9/268 (3%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E T+ L+ R A + +M E G S TYN ++ ++ G +
Sbjct: 487 EPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAES 546
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
V+ +MK K P SY + +NSY ++G+ I +++ HI W +
Sbjct: 547 VIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDI-YDGHIFPSWMLLRT----L 601
Query: 248 IKANLIDKASDVLKKAEERLEQK----DGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
I AN +A +++A + L++ D + +N ++S+++ + L +
Sbjct: 602 ILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGL 661
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ Y ++++ + GE +AE++L+E + SG+ D N VI G+C GL+ A
Sbjct: 662 QPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALR 721
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAG 391
L +++ +G ++ GY G
Sbjct: 722 TLSEMISRGIRPCIVTYNTFVGGYAAKG 749
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 143/319 (44%), Gaps = 6/319 (1%)
Query: 76 KRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQT 133
+ +++ L + D M KG+ F + + GR A+ +F LK T
Sbjct: 259 RSWNKILGLLDEMRSKGLG-FDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVT 317
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y ALL + + +ALS ++M++ +TYN+++ Y + G YE+ ++ M
Sbjct: 318 YNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMT 377
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
I P+ +Y IN+YG + ++ + +M+ + + TY + K +
Sbjct: 378 ENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMK-ESGCAPNVCTYNAILGMLGKKSQS 436
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YIT 312
++ +L + + I +N ++S+ + G V R++ E +C +RD + T
Sbjct: 437 EEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQ-EMKSCGFEPDRDTFNT 495
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ A + G +AEK+ E +G + NA++ G + AE++++D+ KG
Sbjct: 496 LITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKG 555
Query: 373 KATTPNSWAVVAAGYFDAG 391
+ S++++ Y G
Sbjct: 556 FKPSETSYSLILNSYAKGG 574
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 7/263 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ALLN R+ A S + MK G S +Y+ I+ Y+K G + + + ++
Sbjct: 527 TYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDI 586
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+IFP R I + L GME + ++ + D + S + + N+
Sbjct: 587 YDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKP-DLVVFNSMLSMFSRKNM 645
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLG---NKSEVLRLWDLEKTACKRYINRD 309
D+A +++ +E Q D + YN L+ LYA G E+LR +L+ + K +
Sbjct: 646 HDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILR--ELQNSGDKSDL-IS 702
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+++ + G EA + L E G N + GY G+ + +L +
Sbjct: 703 YNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMT 762
Query: 370 EKGKATTPNSWAVVAAGYFDAGK 392
+ ++ +V GY A K
Sbjct: 763 KHDCRPNELTYKIVVDGYCKAKK 785
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 105 LDLIGRVHGFLSAESYFSNLKD--DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+DL R AE L++ D+ +Y ++ + RQ +AL +M GI
Sbjct: 672 MDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGI 731
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY-GARSDLEGME 221
+TYN + Y+ G + ++ +VL+ M + P+ +Y+I ++ Y A+ E M+
Sbjct: 732 RPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMD 791
Query: 222 II 223
+
Sbjct: 792 FV 793
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L++ Y R + KA R+++ G ++YN ++ + + G + L+EM
Sbjct: 667 TYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEM 726
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
++ I P +Y + Y A+ ++ +L M + +P+ + TY Y K
Sbjct: 727 ISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNEL----TYKIVVDGYCK 782
Query: 250 ANLIDKASDVL 260
A +A D +
Sbjct: 783 AKKFKEAMDFV 793
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 1/268 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ LLN + + A RKM+E G+ + +TYN ++ Y K G+Y+ ++ M
Sbjct: 177 TFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCM 236
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+K I D +Y + I++ S ++L+ M + + + TY + +++
Sbjct: 237 ASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMR-RNMVYPNEITYNTLISGFVREGK 295
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
I+ A+ V + + I YN LI+ + + GN E LRL D+ + R Y
Sbjct: 296 IEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGA 355
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+L L K E +L+ + G A+I G C NG+++ A +L+D+++
Sbjct: 356 LLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVS 415
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCM 400
+++V+ G+F GK + M
Sbjct: 416 VNPDVVTFSVLINGFFRVGKINNAKEIM 443
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 154/374 (41%), Gaps = 13/374 (3%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY-FSNL-- 124
+I L K+ + AL +S KG+ P + +D + + HG A Y F +
Sbjct: 636 LIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLK-HGHARAALYIFEEMLN 694
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
KD E + +++ Y R+ +T K MK + + TYN ++ Y+K +
Sbjct: 695 KDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMAR 754
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
+ +M PD FS+ I Y + ILR + + H V+D T+
Sbjct: 755 CFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGH-VIDRFTFNMLI 813
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
+ + N + KA +++K+ + + + YN L + + + R+ + +
Sbjct: 814 TKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSV 873
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
N+ YIT++ + ++G + A K+ E + G S +A++ G N+ ++NA +
Sbjct: 874 PTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWV 933
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
L+ ++E T ++ + Y + + L +E K D ++
Sbjct: 934 LDLMLEMQIIPTVATFTTLMHVYCKEANVAKALE-----LRSIMEHCHVKLDVVAYNVLI 988
Query: 425 SKLGDEGSVQDVEA 438
S L G D+EA
Sbjct: 989 SGLCANG---DIEA 999
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/363 (18%), Positives = 136/363 (37%), Gaps = 10/363 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG LL ++AL F +++ + A+ + +N + ++G ++ EM
Sbjct: 562 TYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEM 621
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PDNF+Y I + + ++ + + + + + Y S +K
Sbjct: 622 VTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGH 681
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
A + ++ + + D + +N +I Y+ G S+V + K+ + Y
Sbjct: 682 ARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNI 741
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+L K + K+ G D +++I+GYC + A IL + +G
Sbjct: 742 LLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEG 801
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
++ ++ + + + ++ F+ +K V P+ ++ + L
Sbjct: 802 HVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMV-----IPNVDTYNALFNGLIRTSD 856
Query: 433 VQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKE 488
+ L +P N+Q Y I R G KG +L D MK GI
Sbjct: 857 FHKAHRVLQVLLESGSVPTNKQ-YITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMS 915
Query: 489 ILV 491
+V
Sbjct: 916 AIV 918
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 134/362 (37%), Gaps = 43/362 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+N + R + + A KM + G+ + + Y+ ++ Y K G ++ + M
Sbjct: 422 TFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVM 481
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
D+F+ + + ++ LE E + M LD ++ F N
Sbjct: 482 NHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMG---LD----PNSVTFDCIING 534
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ D L KA ++ + G+ SL+ Y
Sbjct: 535 YGNSGDAL-KAFSVFDKMNSFGH--FPSLFT--------------------------YGG 565
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+L+ L G EA K N+ D I N + C +G + +A A++ ++V
Sbjct: 566 LLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTND 625
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
++ + AG GK A +E P+P V TS++ L G
Sbjct: 626 FLPDNFTYTNLIAGLCKKGKIVAALLLSGKA----IEKGLLSPNPAVYTSLVDGLLKHGH 681
Query: 433 VQ-DVEAFVAALRTVIPMNRQMYHAFIKANIRNGKG--VDELLDSMKADGIDEDEETKEI 489
+ + F L + + ++ I R GK V+++L +MK+ + + T I
Sbjct: 682 ARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNI 741
Query: 490 LV 491
L+
Sbjct: 742 LL 743
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 1/202 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL N +R KA + + E G + Y ++ + G + + EM
Sbjct: 843 TYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEM 902
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K I N + + +E I + ++ + I+ +T+ + H Y K
Sbjct: 903 KTLGISSHNVAMSAIVRGLANSKKIEN-AIWVLDLMLEMQIIPTVATFTTLMHVYCKEAN 961
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ KA ++ E + D + YN LIS + G+ +L++ K YI
Sbjct: 962 VAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIV 1021
Query: 313 MLEALMKLGEHEEAEKVLKEWE 334
++++ E+EK+L++ +
Sbjct: 1022 LIDSFCAGNYQIESEKLLRDIQ 1043
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 49/101 (48%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T T+ L++ Y ++ KAL M+ + L + YN ++ G E +
Sbjct: 945 TVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLY 1004
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
EMK ++++P+ Y + I+S+ A + E +LR+++ +
Sbjct: 1005 EEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDR 1045
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 166/366 (45%), Gaps = 20/366 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y ++N Y + D+A+ +M+ G+ + + +N ++ + + +K + + +M
Sbjct: 280 YNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMV 339
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKA 250
K I P +Y I I+ YG IL EME +P+++ +Y S + K
Sbjct: 340 GKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVI----SYGSLINCLCKD 395
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRD 309
I +A VL+ R + YN LI ++G E LR +D + K I
Sbjct: 396 GKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATI-VT 454
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++++ L K+G+ +EAE++ +G+ D N++I GY N G Q + E +
Sbjct: 455 YNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMK 514
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+ G T N++ + +G ++ G + +K L + PD V +++ +
Sbjct: 515 KLGLKPTINTFHPLISGC-----SKEGIK-LKETLFNEMLQMNLSPDRVVYNAMIHCYQE 568
Query: 430 EGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEE 485
G VQ + + V P N+ Y++ I +++ GK +L+D MKA G+ + +
Sbjct: 569 TGHVQKAFSLQKEMVDMGVRPDNKT-YNSLILGHLKEGKLSETKDLVDDMKAKGLIPEAD 627
Query: 486 TKEILV 491
T +L+
Sbjct: 628 TYSLLI 633
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 146/352 (41%), Gaps = 45/352 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ Y + + D A+ +MK+ + S +T+N ++ K + E+ +L E+
Sbjct: 138 TFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEI 197
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD F+Y I + D G + L + +D T + + K
Sbjct: 198 KCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGK 257
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
++KA +VLK E + YN +++ Y +G+ ++R +T
Sbjct: 258 VEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGD------------------MDRAILT 299
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ E G + N+VI +C ++ AE ++ +V KG
Sbjct: 300 -----------------IEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKG 342
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
A + ++ ++ GY R FQ ++ +E G KP+ S+++ L +G
Sbjct: 343 IAPSVETYNILIDGYGRLCVFSRCFQILEE-----MEENGEKPNVISYGSLINCLCKDGK 397
Query: 433 VQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVDEL--LDSMKADGI 480
+ + E + + R V+P N +Y+ I + GK + L D M +GI
Sbjct: 398 ILEAEMVLRDMVGRGVLP-NANIYNMLIDGSCTVGKLREALRFFDEMSKNGI 448
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 126/306 (41%), Gaps = 13/306 (4%)
Query: 142 VRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDN 201
V ++ D L F++M +G L Y M K G + ++ MK + + P+
Sbjct: 42 VESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNV 101
Query: 202 FSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK 261
F Y + I + E + EM S ++V + T+ + Y KA +D A + +
Sbjct: 102 FVYNVLIGGLCKEKRIRDAEKLFGEM-SVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRE 160
Query: 262 KAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI--NRDYITMLEALMK 319
+ ++ + I +N L+S + E R L + C ++ Y + + L+K
Sbjct: 161 RMKKEKVEPSIITFNSLLSGLCK-ARRIEEARCM-LNEIKCNGFVPDGFTYSIIFDGLLK 218
Query: 320 LGEHEEAE-KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
+ A + +E G D + ++ G C G V+ AE +L+ LVE G
Sbjct: 219 SDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEV 278
Query: 379 SWAVVAAGYFDAGKTERGFQCMKAALSV-YVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
+ + GY G +R A L++ +E +G +P+ S++ K + + E
Sbjct: 279 IYNTIVNGYCQIGDMDR------AILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAE 332
Query: 438 AFVAAL 443
+V +
Sbjct: 333 EWVKKM 338
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y A+++CY KA S ++M +MG+ TYN ++ + K G+ + D++ +M
Sbjct: 558 VYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDM 617
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
KAK + P+ +Y + I + D G + REM
Sbjct: 618 KAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREM 652
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 4/264 (1%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ +TY L++ Y R + +M+E G + ++Y ++ K G+ + VL
Sbjct: 346 SVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVL 405
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+M + + P+ Y + I+ L EM S+ I TY S K
Sbjct: 406 RDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEM-SKNGIGATIVTYNSLIKGLCK 464
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINR 308
+ +A ++ D I YN LIS Y++ GN + L L++ ++K K IN
Sbjct: 465 MGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINT 524
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
+ ++ K G + E + E S D + NA+I Y G VQ A ++ +++
Sbjct: 525 -FHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEM 582
Query: 369 VEKGKATTPNSWAVVAAGYFDAGK 392
V+ G ++ + G+ GK
Sbjct: 583 VDMGVRPDNKTYNSLILGHLKEGK 606
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 2/243 (0%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY +L+ + + +A F + G +TYN ++ YS G +K ++
Sbjct: 451 TIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELY 510
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
MK + P ++ I S ++ ++ E + EM Q ++ D Y + H Y +
Sbjct: 511 ETMKKLGLKPTINTFHPLI-SGCSKEGIKLKETLFNEM-LQMNLSPDRVVYNAMIHCYQE 568
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ KA + K+ + + D YN LI + G SE L D K
Sbjct: 569 TGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADT 628
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ L + A +E +G + I N + G +G +Q A++I +++
Sbjct: 629 YSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMI 688
Query: 370 EKG 372
G
Sbjct: 689 ANG 691
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 5/318 (1%)
Query: 57 GNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLS 116
G V + + +++R L + R+ A+E M R G+ + + +D + + +
Sbjct: 183 GGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTL-MDALVKENSVEH 241
Query: 117 AESYFSNLKDD-EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCL 175
A F KD T+ L++ + + R+ D AL +MKE G ++Y I+
Sbjct: 242 ANDVFVEFKDSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEA 301
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVL 235
Y + + KV VL EM+ K P+ +Y I +++ G ++ + +M+ V
Sbjct: 302 YCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSS-CVP 360
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-L 294
D S Y+S + KA + A DV + ++ D + YN +IS + + L+ L
Sbjct: 361 DTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLL 420
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
+E+++CK +N Y +L+ + + +L + S + + ++ G C
Sbjct: 421 LKMEESSCKPDLNT-YSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCK 479
Query: 355 NGLVQNAEAILEDLVEKG 372
+G +++A E++V KG
Sbjct: 480 SGKLEHACLFFEEMVSKG 497
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 135/277 (48%), Gaps = 14/277 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG---RVHGFLSAESYFSNL 124
+I + + + S A +V D ++++G+ C+ LIG R AE +
Sbjct: 218 LITEYCRDGKLSLAFKVFDEISKRGV----ACNAVTYNILIGGLCRKGQVSKAEGLLERM 273
Query: 125 KDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
K T +T+ L++ Q DKALS+ K+K +G+ + +TYN ++ +SK G
Sbjct: 274 KRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNS 333
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
V +++ EM+ + I P +Y I +N++ D+E + M+ + +V D TY
Sbjct: 334 SVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMK-RIGLVPDQHTYGV 392
Query: 243 AAH-FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKT 300
H IK N+++ AS + K E Q + + YN +I+ Y N + L+ L ++ K
Sbjct: 393 LIHGLCIKGNMVE-ASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKN 451
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
+ YI+ ++ L K G+ EA+++LKE +G
Sbjct: 452 GVTPNV-ASYISTIQILCKDGKSIEAKRLLKEMTEAG 487
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 155/367 (42%), Gaps = 64/367 (17%)
Query: 108 IGRVHGFLS--AESYF-------SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
IG V+ FLS SYF NL + + A++N + + +++L F+ M
Sbjct: 6 IGFVYPFLSNRITSYFFTISSTQRNLNSESVCGRPRDAVINASFQSQLLEQSLDSFKLMV 65
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL- 217
G + S+ ++N+ + L +K+G ++ TE + F D +S+ I I ++ ++
Sbjct: 66 LKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQF-DVYSFGITIKAFCENGNVS 124
Query: 218 EGMEII--LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE---------- 265
+G E++ + M P++ + Y + ID+A + + ++
Sbjct: 125 KGFELLAQMETMGVSPNVFI----YTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIY 180
Query: 266 ---------RLEQKDGI----------------GYNFLISLYASLGNKSEVLRLWDLEKT 300
+ +KDG YN LI+ Y G S +++D
Sbjct: 181 TIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFD---E 237
Query: 301 ACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
KR + + +T ++ L + G+ +AE +L+ + + + TR N ++ G CN G
Sbjct: 238 ISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQ 297
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP 417
+ A + LE L G T ++ ++ +G+ G + + + L +E +G P
Sbjct: 298 LDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSS-----VVSELVREMEDRGISPS- 351
Query: 418 KVITSIL 424
KV +IL
Sbjct: 352 KVTYTIL 358
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 15/259 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+ Y R + A F ++ + G+A + +TYN ++ + GQ K +L M
Sbjct: 214 TYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM 273
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIK 249
K +I P ++ + ++ L+ L +++ P +V TY + K
Sbjct: 274 KRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLV----TYNILISGFSK 329
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
S+++++ E+R + Y L++ + + + ++ L K
Sbjct: 330 VGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHT 389
Query: 310 YITMLEALMKLGEHEEAEKVLK---EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y ++ L G EA K+ K E L N I N +I GYC A LE
Sbjct: 390 YGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDV---IYNTMINGYCKECNSYKALKFLE 446
Query: 367 DLVEKGKATTPNSWAVVAA 385
++V+ G TPN + ++
Sbjct: 447 EMVKNG--VTPNVASYIST 463
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 159/371 (42%), Gaps = 35/371 (9%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L+NC R D ++S KM ++GI +T+N ++ G+ ++ ++ EM +
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLI 253
P+ SY IN + + ++ME +P++V TY++ K L+
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVV----TYSTIIDSLCKDRLV 249
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---- 309
+ A + L + ER + YN ++ + +LG +E RL+ K + RD
Sbjct: 250 NDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLF-------KEMVGRDVMPN 302
Query: 310 ---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+ +++ L K G EA V + G D NA++ GYC L+ A+ + E
Sbjct: 303 TVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFE 362
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSIL 424
++ KG A +S+ ++ GY K+ R M A S+ E K PD ++++
Sbjct: 363 IMIRKGCAPGAHSYNILINGY---CKSRR----MDEAKSLLAEMYHKALNPDTVTYSTLM 415
Query: 425 SKLGDEGSVQDVEAFVAALRTVIPM-NRQMYHAFIKANIRNGKGVDE---LLDSMKADGI 480
L G ++ + + P N Y + ++G +DE LL SMK +
Sbjct: 416 QGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGH-LDEALKLLKSMKEKKL 474
Query: 481 DEDEETKEILV 491
+ + IL+
Sbjct: 475 EPNIVHYTILI 485
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 127/302 (42%), Gaps = 12/302 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ + R + A+ +M E GI + TYN I+ + GQ + + EM
Sbjct: 235 TYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM 294
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+++ P+ ++ I ++ + ++ M ++ + D STY + Y L
Sbjct: 295 VGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETM-TEKGVEPDISTYNALMDGYCLQRL 353
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
+++A V + + YN LI+ Y E L + +N D
Sbjct: 354 MNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLL---AEMYHKALNPDTVT 410
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+++ L +LG +EA + KE G + ++ G+C +G + A +L+ +
Sbjct: 411 YSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMK 470
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
EK + ++ G F AGK E + L + G G +PD + T ++ L
Sbjct: 471 EKKLEPNIVHYTILIEGMFIAGKLE-----VAKELFSKLFGDGTRPDIRTYTVMIKGLLK 525
Query: 430 EG 431
EG
Sbjct: 526 EG 527
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 159/403 (39%), Gaps = 40/403 (9%)
Query: 6 KLSTNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGEL 65
K+ ++ N + R + N I+ TT+ + + GN ++ +NG K V
Sbjct: 178 KIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVD-VFKKMEQNGCKPNVVTY 236
Query: 66 QRIIRDLRKRKRFSQALEVSDWMNRKGI--------------CVFAPCDHAVQL--DLIG 109
II L K + + A+E M +GI C + A +L +++G
Sbjct: 237 STIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVG 296
Query: 110 R------------VHGFLS------AESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDK 149
R V G A F + K E TY AL++ Y QR ++
Sbjct: 297 RDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNE 356
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A F M G A +YN ++ Y K+ + ++ +L EM K + PD +Y +
Sbjct: 357 AKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQ 416
Query: 210 SYGARSDLEGMEIILREMES-QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
+ + +EM S PH + TY + K +D+A +LK +E+
Sbjct: 417 GLCQLGRPKEALNLFKEMCSYGPHP--NLVTYVILLDGFCKHGHLDEALKLLKSMKEKKL 474
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
+ + + Y LI G L+ R R Y M++ L+K G +EA
Sbjct: 475 EPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYD 534
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+ ++ E G ++ N +I G+ N A +++++V K
Sbjct: 535 LFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGK 577
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 154/362 (42%), Gaps = 12/362 (3%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++RDL + + A V D M +G+ + + R AE+ + +
Sbjct: 122 LMRDLVRLGELASAQNVFDEMQSRGV-RRTVVSFNTMISGMCRAGDLDGAETLHRRMSEA 180
Query: 128 EKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
T TYGAL+ R + + A F KM G+ + + + ++ + K G E +
Sbjct: 181 GVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETM 240
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
++ EM+ + + PD +Y +N DL+ I+ EM S + D TY +
Sbjct: 241 LELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA-GLRPDTVTYTTLID 299
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
Y K +D A ++ + D + Y LIS + G ++ R+ A
Sbjct: 300 GYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEP 359
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
N Y +++A + G+ + ++LKE + G N ++ G+C G ++NA+ +L
Sbjct: 360 DNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLL 419
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
++ G + ++ ++ G+ GK + +K+A KG PD V TSI+
Sbjct: 420 NAMINIGVSPDDITYNILLDGHCKHGKVT-DIEELKSA-------KGTVPDLGVYTSIVG 471
Query: 426 KL 427
++
Sbjct: 472 EI 473
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 148/355 (41%), Gaps = 27/355 (7%)
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
+A + + ++ + G+ +N +M + G+ +V EM+++ + S+ I
Sbjct: 99 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
+ DL+G E + R M S+ + D TY + + I+ A V +K R
Sbjct: 159 SGMCRAGDLDGAETLHRRM-SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGM 217
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEE 325
+ + + + LI + G+ +L +L + +R + D +T ++ L + + +
Sbjct: 218 KPNAVVFTILIDAHCKKGDAETML---ELHREMRERGVRPDAVTYNAIVNGLCRARDLKS 274
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
A ++ E +G DT +I GYC + A I +++V +G ++ + +
Sbjct: 275 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 334
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
G AG++ + + + G +PD T ++ +G V+ LR
Sbjct: 335 GLSKAGRSADAERVLGEMMEA-----GLEPDNTTYTMVIDAFCRKGDVK------TGLRL 383
Query: 446 VIPM-NRQMYHAFIKAN-IRNG-------KGVDELLDSMKADGIDEDEETKEILV 491
+ M N+ + N I NG K D LL++M G+ D+ T IL+
Sbjct: 384 LKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILL 438
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 137/351 (39%), Gaps = 47/351 (13%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L+ VR + A + F +M+ G+ + +++N ++ + G + + M
Sbjct: 119 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 178
Query: 194 AKNIFPDNFSY---------------------RIC--------------INSYGARSDLE 218
+ PD ++Y ++C I+++ + D E
Sbjct: 179 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 238
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
M + REM + + D TY + + +A + AS ++ + + D + Y L
Sbjct: 239 TMLELHREMRER-GVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTL 297
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWEL 335
I Y + E+ ++++ + D Y ++ L K G +AE+VL E
Sbjct: 298 IDGYC---KEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMME 354
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
+G D VI +C G V+ +L+++ KG+ ++ V+ G+ G+ +
Sbjct: 355 AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKN 414
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV 446
+ A +++ G PD +L G V D+E +A TV
Sbjct: 415 ADMLLNAMINI-----GVSPDDITYNILLDGHCKHGKVTDIEELKSAKGTV 460
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 96/226 (42%), Gaps = 10/226 (4%)
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
+N L+ LG + ++D ++ R + TM+ + + G+ + AE + +
Sbjct: 119 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 178
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
+G + D A+I G C G +++A + E + G+ PN AVV DA +
Sbjct: 179 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMC--GRGMKPN--AVVFTILIDA-HCK 233
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQM 453
+G L + +G +PD +I++ L ++ V +R+ + +
Sbjct: 234 KGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 293
Query: 454 YHAFIKANIRNGKGVD---ELLDSMKADGIDEDEETKEILVCTMEK 496
Y I + + +D E+ +M A+G+ DE T L+ + K
Sbjct: 294 YTTLIDGYCKE-EELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 338
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 5/275 (1%)
Query: 121 FSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
F +KD ++ TY AL+ Y R+ +AL + +M +G A TYN + +Y K
Sbjct: 111 FQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGK 170
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
G E + +L EM K + PD +Y ++ Y +S ILREM + W
Sbjct: 171 RGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIW- 229
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-L 297
TY K + +A+ + + + + + + Y+ ++SLY G +E +LWD +
Sbjct: 230 TYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEM 289
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
+ C I Y ++E+ G ++EA ++ SG DT+I A++ Y G
Sbjct: 290 IEAGCIPCIIA-YSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGR 348
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
+ AE + ++ ++G ++ ++ + +AG+
Sbjct: 349 CREAELLYFEMTKEGFVPDGITYGILVRAFANAGR 383
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 139/343 (40%), Gaps = 29/343 (8%)
Query: 111 VHGFLSAESYF------------SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
+HG+L +S S K DE Y L+N V + + A MK
Sbjct: 24 IHGYLRQKSKLDHALRLLEVMKESGKKPDEILYN---CLVNGLVNSGRLEAAEKILDDMK 80
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
++ + +TY +++ Y+ TG+ + + EMK K P++++Y I YG + +
Sbjct: 81 RDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFK 140
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+ EM+ D TY A Y K L++ +L + + + D + YN L
Sbjct: 141 EALELYDEMDGVG-CAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTL 199
Query: 279 ISLYAS---LGNKSEVLRLWDLEKTACKRYINR-DYITMLEALMKLGEHEEAEKVLKEWE 334
+ +YA E+LR E T N Y ML + K EA ++ + +
Sbjct: 200 LDVYAKKSYFVKAHEILR----EMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLK 255
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G + +A++ Y +GL A + ++++E G +++ + Y G +
Sbjct: 256 SKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQ 315
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
C + + G PD K+ T+++ G G ++ E
Sbjct: 316 EALACFQD-----MRKSGIVPDTKIYTALMDAYGKAGRCREAE 353
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 197/469 (42%), Gaps = 59/469 (12%)
Query: 61 RVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRV--HGFLSAE 118
RV E ++ + + K+ + VS +N G+C+ A L LI R+ +GF E
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLIN--GLCLKGRVSEA--LVLIDRMVEYGFQPDE 210
Query: 119 SYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
TYG +LN + + AL FRKM+E I S + Y+ ++ K
Sbjct: 211 V-------------TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
G ++ + EM+ K I D +Y I + +LREM + +I+ D
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVV 316
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
T+++ ++K + +A ++ + R D I YN LI + E +++DL
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 299 KT-ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
+ C+ I Y ++ + K ++ ++ +E G +T N +++G+C +G
Sbjct: 377 VSKGCEPDI-VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC--------MKAALSVY-- 407
+ A+ + +++V +G + ++ ++ G D G+ + + M + +Y
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 408 --------------------VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT-- 445
+ KG KPD ++ L +GS+ + + ++
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 446 VIPMNRQMYHAFIKANIRNGKGV---DELLDSMKADGIDEDEETKEILV 491
P + Y+ I+A++ G G+ EL++ MK G D T ++++
Sbjct: 556 CTP-DDFTYNILIRAHL-GGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 148/381 (38%), Gaps = 54/381 (14%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---CLYSKTGQYEK 184
E T ++NCY R+++ A S + ++G T+T++ ++ CL + +
Sbjct: 102 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA 161
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREME--SQPHIVLDWSTYA 241
+ D + EMK + PD + IN + + E + +I R +E QP D TY
Sbjct: 162 LVDRMVEMKQR---PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQP----DEVTYG 214
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL------- 294
+ K+ A D+ +K EER + + Y+ +I G+ + L L
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 295 ---------------------WDLEKTACKRYINRDYI-------TMLEALMKLGEHEEA 326
WD + I R+ I +++ +K G+ EA
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
+++ E G + DT N++I G+C + A + + +V KG +++++
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-EAFVAALRT 445
Y A + + G + + + KG P+ +++ G + E F +
Sbjct: 395 YCKAKRVDDGMRLFRE-----ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Query: 446 VIPMNRQMYHAFIKANIRNGK 466
+P + Y + NG+
Sbjct: 450 GVPPSVVTYGILLDGLCDNGE 470
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 147/361 (40%), Gaps = 40/361 (11%)
Query: 48 PELDNWVKNGNKVRVGELQR----------------IIRDLRKRKRFSQALEVSDWMNRK 91
P L+ K+GN +L R +I L K F AL + + M K
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 92 GICVFAPCDHAVQLDLIGRV--------HGFLSAESYFSNLKDDEKTYQTYGALLNCYVR 143
GI D LIG + + E N+ D T+ AL++ +V+
Sbjct: 275 GI----KADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD---VVTFSALIDVFVK 327
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
+ + +A + +M GIA T+TYN ++ + K + + M +K PD +
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 204 YRICINSY--GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK 261
Y I INSY R D +GM + RE+ S+ ++ + TY + + ++ ++ A ++ +
Sbjct: 388 YSILINSYCKAKRVD-DGMR-LFREISSK-GLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Query: 262 KAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKL 320
+ R + Y L+ G ++ L +++ ++K+ I Y ++ +
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI-YNIIIHGMCNA 503
Query: 321 GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
+ ++A + G D N +I G C G + A+ + + E G TP+ +
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG--CTPDDF 561
Query: 381 A 381
Sbjct: 562 T 562
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 141/354 (39%), Gaps = 19/354 (5%)
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
+ + A+ F M + + + +N + ++T QY+ V M+ I D ++
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 206 ICINSYGARSDLE-GMEIILR--EMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
I IN Y + L ++ R ++ +P D T+++ + + + +A ++ +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEP----DTITFSTLVNGFCLEGRVSEAVALVDR 165
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGE 322
E ++ D + + LI+ G SE L L D + Y +L L K G
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
A + ++ E + VI C +G +A ++ ++ KG +++
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAA 442
+ G + GK + G + ++ + G+ PD ++++ EG + + +
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMI-----GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 443 L--RTVIP---MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
+ R + P + F K N + +++ D M + G + D T IL+
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLH--EANQMFDLMVSKGCEPDIVTYSILI 392
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 5/275 (1%)
Query: 121 FSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
F +KD ++ TY AL+ Y R+ +AL + +M +G A TYN + +Y K
Sbjct: 111 FQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGK 170
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
G E + +L EM K + PD +Y ++ Y +S ILREM + W
Sbjct: 171 RGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIW- 229
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-L 297
TY K + +A+ + + + + + + Y+ ++SLY G +E +LWD +
Sbjct: 230 TYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEM 289
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
+ C I Y ++E+ G ++EA ++ SG DT+I A++ Y G
Sbjct: 290 IEAGCIPCIIA-YSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGR 348
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
+ AE + ++ ++G ++ ++ + +AG+
Sbjct: 349 CREAELLYFEMTKEGFVPDGITYGILVRAFANAGR 383
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 139/343 (40%), Gaps = 29/343 (8%)
Query: 111 VHGFLSAESYF------------SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
+HG+L +S S K DE Y L+N V + + A MK
Sbjct: 24 IHGYLRQKSKLDHALRLLEVMKESGKKPDEILYN---CLVNGLVNSGRLEAAEKILDDMK 80
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
+ ++ + +TY +++ Y+ G+ + + EMK K P++++Y I YG + +
Sbjct: 81 QDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFK 140
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+ EM+ D TY A Y K L++ +L + + + D + YN L
Sbjct: 141 EALELYDEMDG-VGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTL 199
Query: 279 ISLYAS---LGNKSEVLRLWDLEKTACKRYINR-DYITMLEALMKLGEHEEAEKVLKEWE 334
+ +YA E+LR E T N Y ML + K EA ++ + +
Sbjct: 200 LDVYAKKSYFVKAHEILR----EMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLK 255
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G + +A++ Y +GL A + ++++E G +++ + Y G +
Sbjct: 256 SKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQ 315
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
C + + G PD K+ T+++ G G ++ E
Sbjct: 316 EALACFQD-----MRKSGIVPDTKIYTALMDAYGKAGRCREAE 353
>gi|297835316|ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331380|gb|EFH61799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 841
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 167/407 (41%), Gaps = 51/407 (12%)
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEK--------TYQTYGALLNCYVRQRQTDKALSH 153
+ L + + F AE +F DE + TY +++ Y + Q +A
Sbjct: 260 GIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASET 319
Query: 154 FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV------------PDVLT----------- 190
F++M E GI +T+T+N ++ +Y GQ+ +V PD T
Sbjct: 320 FKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTMKFHCAPDTRTYNILISLHTKN 379
Query: 191 -----------EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
EMK + PD SYR + ++ R ++ E ++ EM+ + +D T
Sbjct: 380 NDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRHMVKEAEELIAEMDDN-DVEIDEYT 438
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
++ YI+A +++K+ K+ GY+ I Y G SE R++ +
Sbjct: 439 QSALTRMYIEAEMLEKSWSWFKRFHVAGNMSSE-GYSANIDAYGERGYLSEAERVFICCQ 497
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
KR + +Y M++A E+A ++ + G + D N ++ + +
Sbjct: 498 EVNKRTV-LEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPD 556
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
A+ LE + E G + + V + + G+ + K + +E PD V
Sbjct: 557 KAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIE-----PDVVV 611
Query: 420 ITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG 465
+++ D G+VQ ++V A++ IP N +Y++ IK + G
Sbjct: 612 YGVLINAFADTGNVQQAMSYVEAMKEAGIPENSVIYNSLIKLYTKVG 658
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 11/246 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ DKA + KM+E G + Y ++ + K GQ +V EM
Sbjct: 541 TYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM 600
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
NI PD Y + IN++ +++ + M+ + I + Y S Y K
Sbjct: 601 VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK-EAGIPENSVIYNSLIKLYTKVGY 659
Query: 253 IDKASDVLKK---AEERLEQKDGIGYNFLISLYA--SLGNKSEVLRLWDLEKTACKRYIN 307
+D+A + +K + + D N +I+LY+ S+ K+E + E +R N
Sbjct: 660 LDEAEAIYRKLLRSCNETQYPDVYTSNCMINLYSQRSMVRKAEAI----FESMKQRREAN 715
Query: 308 R-DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+ ML K G EEA ++ K+ D N+V+ Y +G + A +
Sbjct: 716 EFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGLYALDGRFKEAVETFK 775
Query: 367 DLVEKG 372
++V G
Sbjct: 776 EMVSSG 781
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 137/345 (39%), Gaps = 49/345 (14%)
Query: 101 HAVQLDLIGRVHGFLS-AESYFSNLKD-DEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
++ +D G G+LS AE F ++ +++T Y ++ Y + +KA F M
Sbjct: 473 YSANIDAYGE-RGYLSEAERVFICCQEVNKRTVLEYNVMIKAYGISKSCEKACELFESMM 531
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
G+ TYN L ++ A PD A+ LE
Sbjct: 532 SYGVTPDKCTYN-----------------TLVQILASADMPDK-----------AKCYLE 563
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
M + V D Y + ++K ++ A +V K+ E + D + Y L
Sbjct: 564 KMR--------ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 615
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
I+ +A GN + + + K A + Y ++++ K+G +EAE + ++ S N
Sbjct: 616 INAFADTGNVQQAMSYVEAMKEAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCN 675
Query: 339 SY---DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
D N +I Y +V+ AEAI E + ++ +A ++A++ Y G+ E
Sbjct: 676 ETQYPDVYTSNCMINLYSQRSMVRKAEAIFESMKQRREA-NEFTFAMMLCMYKKNGRFEE 734
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAF 439
Q K + + DP S+L +G ++ VE F
Sbjct: 735 ATQIAKQMREMRI-----LTDPLSYNSVLGLYALDGRFKEAVETF 774
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 117 AESYFSNLKDDEKTYQ-TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCL 175
AE+ F ++K + + T+ +L Y + + ++A ++M+EM I L+YN ++ L
Sbjct: 701 AEAIFESMKQRREANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGL 760
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
Y+ G++++ + EM + I PD+ +++
Sbjct: 761 YALDGRFKEAVETFKEMVSSGIQPDDSTFK 790
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 136/297 (45%), Gaps = 13/297 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+NC R RQ ++AL F +MK GI +TYN ++ +Y + G+ + ++ ++
Sbjct: 180 TFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKL 239
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIK 249
K+ N D +Y N Y D + + +++EM S P+ V+ + + + K
Sbjct: 240 KSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLS----K 295
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A +++A V + + + L+ +Y +G + +++ KT +
Sbjct: 296 AGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAV 355
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++++A ++ G E+AE +LKE + +G + D + Y G+V A + + +V
Sbjct: 356 YNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVV 415
Query: 370 E-KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
GK TP ++ A AG+ E+ + + E PD +V +LS
Sbjct: 416 ALNGKPDTPLFTVMIRACKL-AGEIEQASKIFDEMM----ESGCCSPDERVSGMLLS 467
>gi|302822814|ref|XP_002993063.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
gi|300139155|gb|EFJ05902.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
Length = 570
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 176/430 (40%), Gaps = 12/430 (2%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++ L + +++ +V+++M R D+ Q+ +AE+ F+NL
Sbjct: 136 VLFKLLRNEKYKPGWKVANYMIRSEKFELGELDYMFQIAFAALAGCDRAAENMFANLPRV 195
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSH-FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
K + L+ QR+ + F+++K N +M + +++P
Sbjct: 196 YKRKKALLVLMAGSSPQRENRVVMERLFKELKHRSWYTEASALNQMMLFSLQPDLRKRIP 255
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
D+ E K+ + PD SY + + + + G+E + + ++ P+ D ST A
Sbjct: 256 DLFEEAKSLGVAPDVSSYNLYLGFHCKEKNASGLEEVYQMLQEDPNARPDESTLLILACG 315
Query: 247 YIKANLIDKASDVLKKAEERLE----QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
YI DKA L + EE L+ ++ YN L+ LY +K V +W + +
Sbjct: 316 YISVGCFDKAGKALVELEEGLDSGLFRRKQATYNKLLRLYGDTKDKEGVESIWSILSSRP 375
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+ ++ Y + A K +AE++ + + +T A++ Y + G A
Sbjct: 376 LKAVD-SYSYAIAAFGKAEGVHKAEEIFAKVD---GLLETNQVIAMLSVYAHYGYADKAR 431
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
+ + L K + + AGY G+ ++ Q +V + +V+
Sbjct: 432 ELFQKLPRKRMKHRLVVYKYLIAGYLREGEVKKALQVFSMGCTVLRDRCICSAWERVVLD 491
Query: 423 ILSKLGDEGSVQDVEAFVAALRTVIP--MNRQMYHAFIKANIRNGKGVDELLDSMKADGI 480
+L G V ++ + + +V+ +N ++Y +KA + +G + +D G
Sbjct: 492 LLDHFASRGEVAVIDR-IFRMNSVLKHFINMRVYRVVLKAYLNHGASLKRFMDWTMEMGF 550
Query: 481 DEDEETKEIL 490
D ET+E+L
Sbjct: 551 SVDAETRELL 560
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 159/369 (43%), Gaps = 14/369 (3%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY L++ R + DK +M G A + +TYN ++ G+ ++ +L
Sbjct: 100 TVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLL 159
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM-ESQPHIVLDWSTYASAAHFYI 248
+M A P+ ++ + I ++E ++ EM + + D T+ S
Sbjct: 160 EQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLC 219
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYIN 307
K I A +V K+A ER + + + Y+ LI + + E L+L + + C R
Sbjct: 220 KEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGC-RANT 278
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+++ L+K+G E+A VL++ +G D N +I G+ ++ A +L +
Sbjct: 279 VTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 338
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
++E G + ++ + G +G+ + + + Y+ +G P+ +SI+ L
Sbjct: 339 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD-----YMAARGCAPNAITYSSIVDGL 393
Query: 428 GDEGSVQDVEAFV--AALRTVIPMNRQMYHAFIKANIRNGKGVD---ELLDSMKADGIDE 482
G V + + A V+ + Y A I + GK +D E L+ M G
Sbjct: 394 CKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGK-IDEAYEFLERMIRAGRIP 452
Query: 483 DEETKEILV 491
D T IL+
Sbjct: 453 DVVTFSILI 461
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 159/401 (39%), Gaps = 24/401 (5%)
Query: 28 NKTTLYSIISPLGNPGTRIEP--ELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVS 85
N T ++++ L G E L+ NG + II+ L K A V
Sbjct: 135 NAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVV 194
Query: 86 D--WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--KDDEKTYQTYGALLNCY 141
D +M G+ ++V LD + + L A + F + TY L++
Sbjct: 195 DEMFMIESGLSPDVITFNSV-LDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGL 253
Query: 142 VRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDN 201
+ + D+AL KM E+G +T+TY+ ++ K G+ E VL +M+ PD
Sbjct: 254 SKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDA 313
Query: 202 FSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASD 258
+Y I+ + R L +LREM P +V TY + H ++ D+A +
Sbjct: 314 VTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV----TYTTLCHGLCRSGRFDEAVE 369
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLE 315
+L R + I Y+ ++ G +E L + EK A + Y +++
Sbjct: 370 ILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYF--EKMARDEVVAPHVIAYSALID 427
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKAT 375
L K G+ +EA + L+ +G D + +I G C+ G + + + E+G
Sbjct: 428 GLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVP 487
Query: 376 TPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
++A + A + + F + S G PD
Sbjct: 488 DMVTYATLVDRLCRASRVDEAFDLFQQMRS-----DGLSPD 523
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 130/311 (41%), Gaps = 9/311 (2%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
+++ + R+ DKA++ F++M + I +TY ++ K + ++ D+ E +AK
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
P +Y I+ +E + +M TY++ + + +DK
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLE 315
+L++ R + + YN L++ G E L + + C + + +++
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELI-TFGLIIK 179
Query: 316 ALMKLGEHEEAEKVLKEWEL--SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
L K GE E A +V+ E + SG S D N+V+ G C + +A + + +E+G
Sbjct: 180 GLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 239
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
+++ + G K + Q + + + G + + ++++ L G +
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL-----GCRANTVTYSTVVDGLLKVGRM 294
Query: 434 QDVEAFVAALR 444
+D + +R
Sbjct: 295 EDAVVVLRQMR 305
>gi|297790207|ref|XP_002863007.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297308804|gb|EFH39266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 842
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 167/407 (41%), Gaps = 51/407 (12%)
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEK--------TYQTYGALLNCYVRQRQTDKALSH 153
+ L + + F AE +F DE + TY +++ Y + Q +A
Sbjct: 261 GIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASET 320
Query: 154 FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV------------PDVLT----------- 190
F++M E GI +T+T+N ++ +Y GQ+ +V PD T
Sbjct: 321 FKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTMKFHCAPDTRTYNILISLHTKN 380
Query: 191 -----------EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
EMK + PD SYR + ++ R ++ E ++ EM+ + +D T
Sbjct: 381 NDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRRMVKEAEELIAEMDDN-DVEIDEYT 439
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
++ YI+A +++K+ ++ GY+ I Y G SE R++ +
Sbjct: 440 QSALTRMYIEAEMLEKSWSWFRRVHVAGNMSSE-GYSANIDAYGERGYLSEAERVFICCQ 498
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
KR + +Y M++A E+A ++ + G + D N ++ + +
Sbjct: 499 EVNKRTV-LEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPD 557
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
A+ LE + E G + + V + + G+ + K + +E PD V
Sbjct: 558 KAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIE-----PDVVV 612
Query: 420 ITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG 465
+++ D G+VQ ++V A++ IP N +Y++ IK + G
Sbjct: 613 YGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVG 659
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 141/348 (40%), Gaps = 55/348 (15%)
Query: 101 HAVQLDLIGRVHGFLS-AESYFSNLKD-DEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
++ +D G G+LS AE F ++ +++T Y ++ Y + +KA F M
Sbjct: 474 YSANIDAYGE-RGYLSEAERVFICCQEVNKRTVLEYNVMIKAYGISKSCEKACELFESMM 532
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
G+ TYN L ++ A PD A+ LE
Sbjct: 533 SYGVTPDKCTYN-----------------TLVQILASADMPDK-----------AKCYLE 564
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
M + V D Y + ++K ++ A +V K+ E + D + Y L
Sbjct: 565 KMR--------ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 616
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
I+ +A GN + + + K A + Y ++++ K+G +EAE + ++ S N
Sbjct: 617 INAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCN 676
Query: 339 SYDTRIPNAVIIGYCNNGL------VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
+T+ P+ V +C N L V+ AEAI E + ++ +A ++A++ Y G+
Sbjct: 677 --ETQYPD-VYTSHCMNNLCSERSMVRKAEAIFESMKQRREA-NEFTFAMMLCMYKKNGR 732
Query: 393 TERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAF 439
E Q K + + DP S+L +G ++ VE F
Sbjct: 733 FEEATQIAKQMREMRI-----LTDPLSYNSVLGLYALDGRFKEAVETF 775
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 100/246 (40%), Gaps = 11/246 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ DKA + KM+E G + Y ++ + K GQ +V EM
Sbjct: 542 TYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM 601
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
NI PD Y + IN++ +++ + M+ + I + Y S Y K
Sbjct: 602 VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK-EAGIPGNSVIYNSLIKLYTKVGY 660
Query: 253 IDKASDVLKK---AEERLEQKDGIGYNFLISLYA--SLGNKSEVLRLWDLEKTACKRYIN 307
+D+A + +K + + D + + +L + S+ K+E + E +R N
Sbjct: 661 LDEAEAIYRKLLRSCNETQYPDVYTSHCMNNLCSERSMVRKAEAI----FESMKQRREAN 716
Query: 308 R-DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+ ML K G EEA ++ K+ D N+V+ Y +G + A +
Sbjct: 717 EFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGLYALDGRFKEAVETFK 776
Query: 367 DLVEKG 372
++V G
Sbjct: 777 EMVSSG 782
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 117 AESYFSNLKDDEKTYQ-TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCL 175
AE+ F ++K + + T+ +L Y + + ++A ++M+EM I L+YN ++ L
Sbjct: 702 AEAIFESMKQRREANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGL 761
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
Y+ G++++ + EM + I PD+ +++
Sbjct: 762 YALDGRFKEAVETFKEMVSSGIQPDDSTFK 791
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 160/396 (40%), Gaps = 56/396 (14%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM-CLYSKTGQYEKVPDV 188
T TYG L++C R R+ D + F ++ G+ + N + CL E + +
Sbjct: 164 TVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSML 223
Query: 189 LTEMKAKNIFPDNFSYRICINSY--GARSDLEGMEIILRE-------------------- 226
L M PD FSY I S G+RS E ++++LR
Sbjct: 224 LHRMSELGCVPDAFSYNTVIKSLCGGSRSQ-EALDMLLRMTKGDGCSPDVVSYTMVIHGL 282
Query: 227 -MES-------------QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG 272
ME Q +V + TY S H KA +DKA VL++ + Q D
Sbjct: 283 FMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDE 342
Query: 273 IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKV 329
+ Y +I Y+ LG E +++ K + + D +T ++++L K +EA ++
Sbjct: 343 VTYTAMIHGYSCLGRWKEAAKMF---KEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEI 399
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
G+ D + ++ GY G + + + + G + + ++ +
Sbjct: 400 FHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAH-- 457
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKLGDEGSVQD-VEAFVAALRTV 446
+RG M AL ++ E +G P V+T ++++ L G + D +E +
Sbjct: 458 ---AKRGM--MDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIG 512
Query: 447 IPMNRQMYHAFIKANIRNGKGV--DELLDSMKADGI 480
+ N +YH+ I+ +G + EL+ M GI
Sbjct: 513 LKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGI 548
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 28/279 (10%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +L++ + +++ +A F + G ++Y+ ++ Y+ G++ + ++ M
Sbjct: 379 TFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSM 438
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
I D+ + I IN++ R ++ +I EM Q P++V TYA+ +
Sbjct: 439 TDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVV----TYAT-----VI 489
Query: 250 ANLIDKASDVLKKAEERLEQKDGIG-------YNFLISLYASLGNKSEVLRLWDLEKTAC 302
A L L A E+L Q IG Y+ LI + + G ++++ +L
Sbjct: 490 AALCRMGR--LADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHG---DLIKAKELVSEMM 544
Query: 303 KRYINRDYIT----MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
+ I R IT ++ +L G A+ V G+ D N++I GYC G +
Sbjct: 545 DQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKM 604
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
A +L+ +V G +++ + GYF +G+ + G
Sbjct: 605 DKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGL 643
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 134/325 (41%), Gaps = 11/325 (3%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKG----ICVFAPCDHAVQLDLIGRVHGFLSAESYFSN 123
++ L K KR +A E+ + KG I ++ H + GR F+ + F +
Sbjct: 383 LMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATE--GR---FVDMNNLFHS 437
Query: 124 LKDDEKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
+ D+ + + L+N + ++ D+AL F +M+ G++ + +TY ++ + G+
Sbjct: 438 MTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGR 497
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
+ L++M + + P+ Y I + DL + ++ EM Q + + ++
Sbjct: 498 LADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFS 557
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
S H + A DV ++ D +N LI Y +G + + D +A
Sbjct: 558 SIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSA 617
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
Y T++ K G ++ + +E T + V+ G G A
Sbjct: 618 GTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAA 677
Query: 362 EAILEDLVEKGKATTPNSWAVVAAG 386
+ + +++E G A + +++ ++ G
Sbjct: 678 KKMFHEMIESGTAMSISTYTIILQG 702
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 125/305 (40%), Gaps = 5/305 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +++ + + KA + F +M + G+ + +TYN I+ K +K VL +M
Sbjct: 274 SYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQM 333
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+I PD +Y I+ Y + + +EM ++ ++ D T+ S K
Sbjct: 334 FDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEM-TREGLIPDIVTFNSLMDSLCKHKR 392
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+A+++ + + D I Y+ L+ YA+ G ++ L+ + +
Sbjct: 393 SKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNI 452
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ A K G +EA + E G S + VI C G + +A L ++ G
Sbjct: 453 LINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIG 512
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
+ + G+ G + K +S ++ +P+ +SI+ L +EG
Sbjct: 513 LKPNTVVYHSLIQGFCTHGDLIKA----KELVSEMMDQGIPRPNITFFSSIIHSLCNEGR 568
Query: 433 VQDVE 437
V + +
Sbjct: 569 VMNAQ 573
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 3/224 (1%)
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
D T+ +L++ Y + DKA M G +TY+ ++ Y K+G+ +
Sbjct: 584 DRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGL 643
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
+ EM K + P +Y + ++ + + EM + + STY
Sbjct: 644 ILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEM-IESGTAMSISTYTIILQG 702
Query: 247 YIKANLIDKASDVLKK-AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
+ N D+A + K L+ + I + +LY + + E L+ +
Sbjct: 703 LCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALY-KVKRREEAHDLFASVSASGLVP 761
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
Y M+ L+K G EEA+ + E +G + +R+ N +I
Sbjct: 762 NASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDII 805
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 66/166 (39%), Gaps = 1/166 (0%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ TY +L R TD+A++ F K+ M + N ++ K + E+ D+
Sbjct: 692 SISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLF 751
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ A + P+ +Y + I + +E +I+ ME + ++
Sbjct: 752 ASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSME-KTGCAPSSRLLNDIIRMLLQ 810
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
I KA + K + + + + LISL+AS G E ++
Sbjct: 811 KGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKFL 856
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 164/371 (44%), Gaps = 19/371 (5%)
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
DE Y T+ +N Y R +KA+ +M+ G+ +++T+N ++ + + +K
Sbjct: 385 DEVIYNTF---VNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAE 441
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASA 243
+ + +M K + P +Y I+ YG + IL +ME +P++V +Y S
Sbjct: 442 EWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVV----SYGSL 497
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
+ K I +A VL+ R + YN LI +G + LR +D +
Sbjct: 498 INCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEI 557
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
Y +++ L K G+ EAE L + SG+S D N++I GY N G V
Sbjct: 558 SPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLG 617
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
+ E + G T ++ + +G ++ G + ++ + ++ PD V ++
Sbjct: 618 LYETMKNLGIKPTVRTYHPLISGC-----SKEGIELVEKLYNEMLQ-MNLLPDRVVYNAM 671
Query: 424 LSKLGDEGSVQDVEAF-VAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGI 480
+ + G+ Q + L I ++ Y++ I + R GK + +L+++MKA +
Sbjct: 672 IHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKEL 731
Query: 481 DEDEETKEILV 491
+T +ILV
Sbjct: 732 APKADTYDILV 742
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 152/400 (38%), Gaps = 52/400 (13%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y + V+ + + M++ G+ + YN ++ + + + EM
Sbjct: 179 YAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMC 238
Query: 194 AKNIFPDNFSYRICINSYGARSDLEG---MEIILREMESQPHIVLDWSTYASAAHFYIKA 250
N+ +Y I+ Y +L+ M ++E P+I+ T+ S K
Sbjct: 239 NINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII----TFNSLLSGLCKM 294
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+ +A +LK+ E DG Y+ L + + + L++ R N
Sbjct: 295 RKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTG 354
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN---------------- 354
+L L K G+ E+AE++LK++ +G D I N + GYC
Sbjct: 355 SILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMES 414
Query: 355 ----------NGLV---------QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
N L+ AE ++ + EKG + ++ + GY +R
Sbjct: 415 FGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDR 474
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQM 453
FQ ++ +E G KP+ S+++ L +G + + E + + R V+P N Q+
Sbjct: 475 CFQILEQ-----MEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLP-NAQV 528
Query: 454 YHAFIKANIRNGKGVDEL--LDSMKADGIDEDEETKEILV 491
Y+ I + GK D L D M I T +L+
Sbjct: 529 YNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLI 568
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y A+++CY T KA S + M + GI +TYN ++ + + G+ + D++ M
Sbjct: 667 VYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNM 726
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
KAK + P +Y I + + D G + REM
Sbjct: 727 KAKELAPKADTYDILVKGHCDLKDFSGAYVWYREM 761
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 119/305 (39%), Gaps = 12/305 (3%)
Query: 142 VRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDN 201
V ++Q K + F +++ G T Y + K + + L M+ + + P+
Sbjct: 152 VNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNV 211
Query: 202 FSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK 261
F Y + I + E + EM ++V TY + Y K +D A + +
Sbjct: 212 FIYNVLIGGLCREKRIRDAEKMFDEM-CNINLVGSIVTYNTLIDGYCKVGELDAAFKMRE 270
Query: 262 KAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI--TMLEALMK 319
+ +E+ + I +N L+S + E L L++ ++ Y + + L++
Sbjct: 271 RMKEKSVAPNIITFNSLLSGLCKMRKMKEARSL--LKEMEVNGFMPDGYTYSILFDGLLR 328
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
+ A ++ ++ G + + ++ G C G V+ AE IL+ E G
Sbjct: 329 CDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVI 388
Query: 380 WAVVAAGYFDAGKTERGFQCMKAALSV-YVEGKGWKPDPKVITSILSKLGDEGSVQDVEA 438
+ GY G KA L++ +E G +P+ S++ K D + E
Sbjct: 389 YNTFVNGYCRIGDMN------KAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEE 442
Query: 439 FVAAL 443
+V +
Sbjct: 443 WVKKM 447
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 155/388 (39%), Gaps = 53/388 (13%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
D +K+ V RI+R LR + S+A+EV M GI
Sbjct: 493 FDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGI---------------- 536
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+ T TY LL+ Y + + + L +M+ G A + +TY
Sbjct: 537 ------------------KPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTY 578
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ SK G++E+ ++ EM + ++Y I Y + ++ +
Sbjct: 579 NVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKG------LLAEALSL 632
Query: 230 QPHIVLDWS--TYASAAHFYIKANLIDKASDVLKKAEERLEQK---DGIGYNFLISLYAS 284
Q +VL + T A+ F + + SD +++ + L D + YN LI Y
Sbjct: 633 QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCR 692
Query: 285 LGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
LGN + L+D ++ Y T+L+ L + GE E A+++ E G + D
Sbjct: 693 LGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVT 752
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
++ G C G + A+ ++++ +G ++A G G T R F + L
Sbjct: 753 YTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEML 812
Query: 405 SVYVEGKGWKPDP---KVITSILSKLGD 429
+ KG+ PD V+ L KLG+
Sbjct: 813 A-----KGFPPDLIIYNVVVDGLCKLGN 835
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 118/298 (39%), Gaps = 10/298 (3%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSN-LKDDEK-TY 131
K + Q L++ M R+G C + V ++ + + F A+ LK K +
Sbjct: 552 KGGKVQQGLDLLSEMQRRG-CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSA 610
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TY L+ Y + +ALS +M G + + TYN + K G+ L++
Sbjct: 611 YTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSD 670
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYI 248
M A N+ PD SY I Y +L ++ E+ S P IV TY +
Sbjct: 671 MLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIV----TYNTLLDGLC 726
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
+ ++ A + + D + Y L++ +G+ S +D +
Sbjct: 727 RQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSY 786
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y T + +KLG+ A + +E G D I N V+ G C G ++ A +L+
Sbjct: 787 AYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQ 844
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 123/307 (40%), Gaps = 32/307 (10%)
Query: 50 LDNWVKNGNKVRVG-----ELQR------------IIRDLRKRKRFSQALEVSDWMNRKG 92
LD++ K G KV+ G E+QR +I L K+ F QA + M + G
Sbjct: 547 LDSYCKGG-KVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 605
Query: 93 ICVFAPCDHAVQLDLIGRVHGFLSAESYFSN----LKDDEKTYQTYGALLNCYVRQRQTD 148
+ V A + + G + L AE+ LK T TY + + + +
Sbjct: 606 LKVSA---YTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMS 662
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
A+ M + ++YN ++ Y + G K + E+++ +FP +Y +
Sbjct: 663 DAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLL 722
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
+ + +LE + + EM ++ I D TY + K + A + +
Sbjct: 723 DGLCRQGELEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 781
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEE 325
+ D Y I LG+ S R + L++ + D I +++ L KLG EE
Sbjct: 782 ELDSYAYATRIVGELKLGDTS---RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEE 838
Query: 326 AEKVLKE 332
A ++L++
Sbjct: 839 ASELLQK 845
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 136/344 (39%), Gaps = 45/344 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+ ++ + A MK G+ + TYN ++ Y K G ++ +V+ M
Sbjct: 245 TYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIV---------LDWSTY 240
N+ PD ++Y + IN +E + EME+ P +V L+WS
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKI 364
Query: 241 ASA----------------------AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+ A +Y K +D AS+ + K EE D + YN L
Sbjct: 365 SEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM---LEALMKLGEHEEAEKVLKEWEL 335
I+ Y GN E R D ++ + D +T+ L L + + EEA K+L
Sbjct: 425 INGYCKAGNMGEAFRTMD---EMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARK 481
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G D +I+GY +G V A + +++ EK + ++ + G GKTE+
Sbjct: 482 RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
+ L G PD +IL EG V+ F
Sbjct: 542 AISKLNELLE-----SGLLPDETTYNTILHGYCREGDVEKAFQF 580
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 137/346 (39%), Gaps = 41/346 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y L+N + + +A +M E G+ + +T+N ++ Y K G+ + + +T+M
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKM 409
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD +Y IN Y ++ + EM + ++ +D T + +
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEM-GRKNMKMDSVTLNTILRTLCREKK 468
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+++A +L A +R D + Y LI Y GN L+LWD K Y
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA----------- 361
++ L + G+ E+A L E SG D N ++ GYC G V+ A
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Query: 362 -----------------EAILEDL-------VEKGKATTPNSWAVVAAGYFDAGKTERGF 397
E +LE V KGKA ++ + G+ + F
Sbjct: 589 FKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
+ +E K PD +I++ L D G +++ E F++ +
Sbjct: 649 NLLSE-----MEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 4/250 (1%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
N+K D T T +L R+++ ++A ++ G + ++Y ++ Y K G
Sbjct: 448 NMKMDSVTLNT---ILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNV 504
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
++ + EMK K I P +Y I E L E+ + ++ D +TY +
Sbjct: 505 DRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL-LESGLLPDETTYNT 563
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
H Y + ++KA K E + D N L+ G + L+L++ +
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKG 623
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
K Y T++ +L K G ++A +L E E D NA+I ++G ++ AE
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAE 683
Query: 363 AILEDLVEKG 372
+ ++EKG
Sbjct: 684 EFMSKMLEKG 693
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 132/315 (41%), Gaps = 9/315 (2%)
Query: 133 TYGALLNCYVRQRQTDK---ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T LLN VR + + F ++GI + T+N ++ Y +++ + L
Sbjct: 172 TCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFL 231
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
M N PDN +Y +++ + L +L +M+S+ ++ + +TY + Y K
Sbjct: 232 NVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSR-GLLPNRNTYNILVYGYCK 290
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ +A++V++ + D YN LI+ + G E +L D +
Sbjct: 291 MGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVS 350
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T++ ++ + EA K+L+E G + N ++ YC G + +A + +
Sbjct: 351 YNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKME 410
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E G + ++ + GY AG F+ M + K K D + +IL L
Sbjct: 411 ESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE-----MGRKNMKMDSVTLNTILRTLCR 465
Query: 430 EGSVQDVEAFVAALR 444
E +++ +++ R
Sbjct: 466 EKKLEEAYKLLSSAR 480
>gi|242091740|ref|XP_002436360.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
gi|241914583|gb|EER87727.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
Length = 999
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 162/413 (39%), Gaps = 53/413 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ R + ++AL F +MK GI S T ++ LY K Y K +L+EM
Sbjct: 316 TYSLLISASSRHGKGEQALRLFEEMKAQGIVPSNYTCASLLALYYKNEDYSKALSLLSEM 375
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD Y I I YG E E ++E + ++ D TY + A ++ A
Sbjct: 376 ENSKVIPDEVIYGILIRIYGKLGLYEEAEQTFEKIE-KAGLLSDEQTYVAMAQVHLNAGD 434
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
D+A +VL+ R + Y+ ++ Y + K +++ D + + + +
Sbjct: 435 YDRALEVLESMMMRNVKPSHFSYSAILRCYVA---KEDIVAAEDTFRALSQHGLPDVFCC 491
Query: 313 --MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+L M+LG E+A ++ + D + V+ YC + ++ +AE I +D+
Sbjct: 492 NDLLRLYMRLGHLEKARALVLKMREDDFRLDEDLSMTVMKFYCKSNMINDAEKIFKDIQR 551
Query: 371 KGKATTPNSWAVVAAGY-----------------FDAGKTERGFQCMKAAL-------SV 406
K + ++ Y D + +K+ L SV
Sbjct: 552 NNKTVKIPTMLLLIEMYARNKSSVILREHSSSKALDGTDSSAASVALKSLLDMPGGLSSV 611
Query: 407 YV-------EGK--------------GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
+ EG G+KPD I +++ + G ++ + +
Sbjct: 612 SLLISKLAREGSTDEAKFIYDQLTELGFKPDHTAIATLVVQYGQGKQLEQAQELFESASA 671
Query: 446 VIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILVCTMEK 496
+ P +Y+A + A + GK D L M G + D T ILV + K
Sbjct: 672 LFPEGANVYNAMVDAFCKCGKTEDAYHLFMEMVDQGSNRDAVTVSILVTHLTK 724
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 132/300 (44%), Gaps = 14/300 (4%)
Query: 113 GFLSAESYFSNLKDD---EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
G+ A +F+ +K E + Y LL Y + + A F +M ++G +
Sbjct: 153 GWRQARDFFAWMKLQLCYEPSVVAYTILLRLYGKVGKIKLAEETFLEMLQVGCEPDAVAC 212
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
++C+Y++ G+++ + + ++ +++ P Y I+S + L G I + +
Sbjct: 213 GTLLCMYARWGRHKDMMLFYSAVRRRDLVPPVSVYNYMISSL-QKQKLHGKVIHVWKQMR 271
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + + TY ++K +L++KA DV + + + Y+ LIS + G
Sbjct: 272 EAGALPNQFTYTVVISSFVKEDLLEKAMDVFGEMRQCRFVPEEATYSLLISASSRHGKGE 331
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+ LRL++ K N ++L K ++ +A +L E E S IP+ VI
Sbjct: 332 QALRLFEEMKAQGIVPSNYTCASLLALYYKNEDYSKALSLLSEMENS-----KVIPDEVI 386
Query: 350 IG-----YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
G Y GL + AE E + + G + ++ +A + +AG +R + +++ +
Sbjct: 387 YGILIRIYGKLGLYEEAEQTFEKIEKAGLLSDEQTYVAMAQVHLNAGDYDRALEVLESMM 446
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 108/259 (41%), Gaps = 20/259 (7%)
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
++ QT+ +++ + + + DKA+ F +E+G+ + Y +++ LY K G++++ +
Sbjct: 745 QSMQTFNLMISVFGKGGKLDKAVEMFAAAQELGLPIDEKMYTNMLSLYGKAGRHQEASLM 804
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
MK I P S+ IN+Y + EM+ H D +Y + Y
Sbjct: 805 FKRMKEDGIRPGKISFNSMINAYATSGLCSEAKSTFHEMQDCGH-APDSFSYLALIRAYT 863
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK-------TA 301
+A L +A + ++ ++ LI + G E R+++ K A
Sbjct: 864 EAKLYMEAEEAIRMMLNSSTTPSCPHFSHLIFAFLKEGQIGEAQRIYNQMKEASVAPDLA 923
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY--DTRIPNAVIIGYCNNGLVQ 359
C R + R Y+ EH ++ + +E + S D+ I +A Y + G
Sbjct: 924 CCRTMMRVYM----------EHGLMDEGITLYETTRGSLKPDSFILSAAFHLYDHAGRES 973
Query: 360 NAEAILEDLVEKGKATTPN 378
A+ +L+ + G + N
Sbjct: 974 EAQDVLDAISVSGTSFLRN 992
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/379 (19%), Positives = 164/379 (43%), Gaps = 34/379 (8%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+++ + ++ +Y A+L CYV + A FR + + G+ ND++ LY + G E
Sbjct: 447 MRNVKPSHFSYSAILRCYVAKEDIVAAEDTFRALSQHGLP-DVFCCNDLLRLYMRLGHLE 505
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ------PHIVLDW 237
K ++ +M+ + D + Y + + E I ++++ P ++L
Sbjct: 506 KARALVLKMREDDFRLDEDLSMTVMKFYCKSNMINDAEKIFKDIQRNNKTVKIPTMLLLI 565
Query: 238 STYA-SAAHFYIKANLIDKASDVLKKA------EERLEQKDGI-GYNFLISLYASLGNKS 289
YA + + ++ + KA D + + L+ G+ + LIS A G+
Sbjct: 566 EMYARNKSSVILREHSSSKALDGTDSSAASVALKSLLDMPGGLSSVSLLISKLAREGSTD 625
Query: 290 EVLRLWD-LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD--TRIPN 346
E ++D L + K D+ + +++ G+ ++ E+ + +E + + + N
Sbjct: 626 EAKFIYDQLTELGFK----PDHTAIATLVVQYGQGKQLEQAQELFESASALFPEGANVYN 681
Query: 347 AVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSV 406
A++ +C G ++A + ++V++G + +++ GK + +A+S+
Sbjct: 682 AMVDAFCKCGKTEDAYHLFMEMVDQGSNRDAVTVSILVTHLTKHGK-------LHSAISI 734
Query: 407 Y--VEGKGWKPDPKVITSILSKLGDEGSV-QDVEAFVAALRTVIPMNRQMYHAFIKANIR 463
Y + G + ++S G G + + VE F AA +P++ +MY + +
Sbjct: 735 YDRMISSGTSQSMQTFNLMISVFGKGGKLDKAVEMFAAAQELGLPIDEKMYTNMLSLYGK 794
Query: 464 NGKGVDE--LLDSMKADGI 480
G+ + + MK DGI
Sbjct: 795 AGRHQEASLMFKRMKEDGI 813
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 18/372 (4%)
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
+ + ++GR+ A++ F ++ T + AL++ Y R D+A+ F MK
Sbjct: 189 SAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKS 248
Query: 160 MGIALSTLTYNDIMCLYSKTG-QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
G+ + +TYN ++ K G + + ++ EM + PD ++ + G E
Sbjct: 249 SGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWE 308
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+ EM + I D TY + K +D A ++ + + + + Y+ +
Sbjct: 309 AARNLFSEMLYR-GIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTV 367
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
I YA G E L L++ K A Y T+L KLG EEA V KE E SG
Sbjct: 368 IDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGI 427
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERG 396
D NA++ GY G + + + E++ K + PN +++ + Y G
Sbjct: 428 KKDAVTYNALLGGYGKQGKYEEVKRVFEEM--KAERIFPNLLTYSTLIDVYSKGG----- 480
Query: 397 FQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQM 453
+ A+ V+ E K G K D + ++++ L G V+ +F+ + + I N
Sbjct: 481 --LYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVT 538
Query: 454 YHAFIKANIRNG 465
Y++ I A R+G
Sbjct: 539 YNSIIDAFGRSG 550
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 139/320 (43%), Gaps = 28/320 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ Y + + D+AL+ F +MK I L ++YN ++ +Y+K G++E+ +V EM
Sbjct: 363 TYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEM 422
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ I D +Y + YG + E ++ + EM+++ I + TY++ Y K L
Sbjct: 423 ESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAE-RIFPNLLTYSTLIDVYSKGGL 481
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+A +V ++ ++ + D + Y+ LI G + D E T K I + +T
Sbjct: 482 YQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLD-EMT--KEGIRPNVVT 538
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+ G AE V+ Y+T + + ++ ++ED E
Sbjct: 539 YNSIIDAFGRSGSAECVIDP------PYETNVSK----------MSSSSLKVVEDATESE 582
Query: 373 KATTPNSWAVVAAGYFDAGKT------ERGFQCMKAALSVYVEGKGWKPDPKVIT--SIL 424
++ + G A KT RG Q + L+V+ + P V+T +IL
Sbjct: 583 VGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAIL 642
Query: 425 SKLGDEGSVQDVEAFVAALR 444
+ S +D + LR
Sbjct: 643 NACSRCNSFEDASMLLEELR 662
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 159/395 (40%), Gaps = 53/395 (13%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM-CLYSKTGQYEKVPDV 188
T +TYG L++C R R+ D + ++ G+ T+ + CL E V +
Sbjct: 123 TVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVL 182
Query: 189 LTEMKAKNIFPDNFSYRICINSY-GARSDLEGMEIILREMES------------------ 229
L M + PD SY I S G E ++++ R +
Sbjct: 183 LHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 242
Query: 230 -----------------QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG 272
Q +V D TY S KA +DKA VL++ ++ + DG
Sbjct: 243 FKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDG 302
Query: 273 IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI--NRDYITMLEALMKLGEHEEAEKVL 330
+ YN +I Y+ G+ E +++ K K I + + + +L K G ++AE++
Sbjct: 303 VTYNAIIHGYSCSGHWKESAKMF--RKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIF 360
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+ G+ D + ++ GY G + + + +KG + + ++ + +
Sbjct: 361 QYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAH--- 417
Query: 391 GKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVI 447
+RG M A+ V+ E G+G +P+ ++++S G + D +E F + I
Sbjct: 418 --AKRGM--MDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGI 473
Query: 448 PMNRQMYHAFIKANIRNGKGV--DELLDSMKADGI 480
N +YH+ I +G V E + M + G+
Sbjct: 474 EPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGL 508
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/472 (19%), Positives = 188/472 (39%), Gaps = 60/472 (12%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLS------AESYF 121
+I+ L R +AL++ M ++G C V + +HGF A + F
Sbjct: 201 VIKSLCGDSRSQEALDMVQRMAKEG----GRCSPDV-VSFNTVIHGFFKQGEVSKACNLF 255
Query: 122 SNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
+ + K TY ++++ + R DKA R+M + G+ +TYN I+ YS +
Sbjct: 256 NEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCS 315
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
G +++ + +M +K + PD ++ ++S + E I + M ++ H+ D +
Sbjct: 316 GHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMP-DIVS 374
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
Y+ H Y +++ ++ + N LIS +A G E + ++ +
Sbjct: 375 YSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQ 434
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
R Y T++ A ++G +A + + G +T + +++I G+C +G +
Sbjct: 435 GQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLV 494
Query: 360 NAEAILEDLVEKGKATTPN-------------------------------------SWAV 382
A+ + +++ KG PN ++
Sbjct: 495 KAKEFISEMMSKG-LHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNS 553
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVA 441
+ GY GK E+ F + A +SV G +PD +++S G + D + F
Sbjct: 554 LIDGYCLVGKMEKAFGVLDAMVSV-----GIEPDVVTNNTLVSGYCKSGKIDDGLILFRE 608
Query: 442 ALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETKEILV 491
L + Y+ + +R G+ ++ M G D +T +IL+
Sbjct: 609 MLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILL 660
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 118/281 (41%), Gaps = 9/281 (3%)
Query: 71 DLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD--DE 128
DL K K F + +S ++R I F+ H++ ++ GRV + A+ F+ + D
Sbjct: 492 DLVKAKEFISEM-MSKGLHRPNIVFFSSIIHSLCIE--GRV---MDAQDVFNLVIHIGDR 545
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
T T+ +L++ Y + +KA M +GI +T N ++ Y K+G+ + +
Sbjct: 546 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLIL 605
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
EM K + P +Y I ++ + + EM V D TY
Sbjct: 606 FREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAV-DIDTYKILLKGLC 664
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
+ +L D+A + K + D N +I+ + + E L+ T+
Sbjct: 665 RNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVS 724
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
Y M+ L+K G EEA+ + E SG + +R+ N +I
Sbjct: 725 TYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 765
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 159/386 (41%), Gaps = 50/386 (12%)
Query: 105 LDLIGRVHGFLSAESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+D G+V S F+ +KD TY L+NCY + + +A +F +MK G+
Sbjct: 272 IDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGL 331
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+ +TY+ ++ + K G + +L +M+ + P+ F+Y I++ +L
Sbjct: 332 KPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWK 391
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+L +M Q + L+ TY + KA + +A +V + KDGI N
Sbjct: 392 LLNDM-LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM-----LKDGISPN------ 439
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
+ Y ++ +K E+A K+LK+ D
Sbjct: 440 ------------------------QQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL 475
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA 402
+ ++I G+C+ ++ + ILE++ +G + P + YF AGK+
Sbjct: 476 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSD------- 528
Query: 403 ALSVYVEGKGWKPDPKVIT--SILSKLGDEGSVQ-DVEAFVAALRTVIPMNRQMYHAFIK 459
AL+ + E + + ++T ++ L + G V+ V+ F L + N +Y + I
Sbjct: 529 ALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLID 588
Query: 460 ANIRNG--KGVDELLDSMKADGIDED 483
N + +L D M+ G+ D
Sbjct: 589 GLCXNNCIESAKKLFDEMQCRGMTPD 614
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 141/342 (41%), Gaps = 11/342 (3%)
Query: 154 FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGA 213
F M GIA S TYN ++ K G E + +M+ + PD +Y I+ YG
Sbjct: 218 FNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGK 277
Query: 214 RSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGI 273
LE + + EM+ V D TY + Y K + +A + + + + + +
Sbjct: 278 VGSLEEVASLFNEMK-DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV 336
Query: 274 GYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
Y+ LI + G ++L D+ +T Y ++++A K G EA K+L +
Sbjct: 337 TYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPN-EFTYTSLIDANCKAGNLTEAWKLLND 395
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
+G + A++ G C G + AE + +++ G + + + GY A +
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455
Query: 393 TERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNR 451
E + +K + KPD + SI+ + +++ + + +++ I N
Sbjct: 456 MEDAMKILKQMTECNI-----KPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 510
Query: 452 QMYHAFIKANIRNGKGVDEL--LDSMKADGIDEDEETKEILV 491
+ I A + GK D L M+ G++ T +L+
Sbjct: 511 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLI 552
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 114/241 (47%), Gaps = 3/241 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +LL R + A + F +M + GI TYN ++ K GQ + +++ EM
Sbjct: 295 TYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEM 354
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K I P+ +Y + Y LE + EM+ I LD +Y + Y K
Sbjct: 355 PGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFL-GIGLDRVSYNTLLSIYAKLGR 413
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-RDYI 311
+ A V K+ +KD + YN L+ Y G +EV R++ E + + N Y
Sbjct: 414 FEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFK-EMKKDRVFPNLLTYS 472
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T+++ K +EEA +V +E++ +G D + + +I C NGLV +A +L+++ ++
Sbjct: 473 TLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKE 532
Query: 372 G 372
G
Sbjct: 533 G 533
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 2/240 (0%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG-QYEKVPDV 188
T + AL++ Y + D+A+ F MK G+ + +TYN ++ K G ++++V ++
Sbjct: 221 TVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEI 280
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
EM + PD +Y + E + EM + I D TY +
Sbjct: 281 FEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDR-GIDQDVFTYNTLLDAVC 339
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K +D A +++ + + + + Y+ + YA G + L L++ K
Sbjct: 340 KGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRV 399
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y T+L KLG E+A KV KE SG D NA++ GY G + +++
Sbjct: 400 SYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEM 459
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+K TY ALL+ Y +Q + ++ F++MK+ + + LTY+ ++ +YSK YE+ +
Sbjct: 430 KKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAME 489
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAA 244
V E K + D Y IN+ ++ ++L EM + P++V TY S
Sbjct: 490 VFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVV----TYNSII 545
Query: 245 HFYIKANLIDKASDVLKKAEER 266
+ ++ + D + + ER
Sbjct: 546 DAFGRSTTAEFLVDGVGASNER 567
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 114/241 (47%), Gaps = 3/241 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +LL R + A + F +M + GI TYN ++ K GQ + +++ EM
Sbjct: 295 TYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEM 354
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K I P+ +Y + Y LE + EM+ I LD +Y + Y K
Sbjct: 355 PGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFL-GIGLDRVSYNTLLSIYAKLGR 413
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-RDYI 311
+ A V K+ +KD + YN L+ Y G +EV R++ E + + N Y
Sbjct: 414 FEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFK-EMKKDRVFPNLLTYS 472
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T+++ K +EEA +V +E++ +G D + + +I C NGLV +A +L+++ ++
Sbjct: 473 TLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKE 532
Query: 372 G 372
G
Sbjct: 533 G 533
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 2/240 (0%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG-QYEKVPDV 188
T + AL++ Y + D+A+ F MK G+ + +TYN ++ K G ++++V ++
Sbjct: 221 TVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEI 280
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
EM + PD +Y + E + EM + I D TY +
Sbjct: 281 FEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDR-GIDQDVFTYNTLLDAVC 339
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K +D A +++ + + + + Y+ + YA G + L L++ K
Sbjct: 340 KGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRV 399
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y T+L KLG E+A KV KE SG D NA++ GY G + +++
Sbjct: 400 SYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEM 459
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+K TY ALL+ Y +Q + ++ F++MK+ + + LTY+ ++ +YSK YE+ +
Sbjct: 430 KKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAME 489
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAA 244
V E K + D Y IN+ ++ ++L EM + P++V TY S
Sbjct: 490 VFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVV----TYNSII 545
Query: 245 HFYIKANLIDKASDVLKKAEER 266
+ ++ + D + + ER
Sbjct: 546 DAFGRSTTAEFLVDGVGASNER 567
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 145/337 (43%), Gaps = 39/337 (11%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L+N V R+ D A++ +R++K G+ + TY + + + G + DV +M+
Sbjct: 190 LMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESG 249
Query: 197 IFPDNFSYRICINSYG--ARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
+ P++FSY I RSDL G +++ + ++ I +D Y + +
Sbjct: 250 VTPNSFSYTTFIEGLCLHGRSDL-GFKVLQDVINAK--IPMDVFAYTVVIRGFCSEMKLK 306
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITML 314
+A +L++ E++ D Y LIS Y +GN + L L D + + ++L
Sbjct: 307 EAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSIL 366
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
+ L ++G E KE++ G +D N V+ C G V+ A +L ++ KGK
Sbjct: 367 QGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEM--KGKK 424
Query: 375 TTPN--SWAVVAAGYFDAGKT-------------------------ERGFQ---CMKAAL 404
P+ ++ V +GYF GK GF + AL
Sbjct: 425 MVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEAL 484
Query: 405 SV--YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
S+ Y+E +G KPD I+ L G V D +AF
Sbjct: 485 SLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAF 521
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 94/463 (20%), Positives = 181/463 (39%), Gaps = 27/463 (5%)
Query: 51 DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGR 110
D V G K L I++ L + S+ + GI C + V +D + +
Sbjct: 348 DEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEAC-YNVVMDALCK 406
Query: 111 VHGFLSAESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLT 168
+ A +K + Y +++ Y + + AL+ +R+MK++G +T
Sbjct: 407 LGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVT 466
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
YN + +S+ G ++ +L M+ + + PD ++ + I ++ + +E
Sbjct: 467 YNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLE 526
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
+ Y++ + Y +AN ++KA +L + ++ + L+ S G+
Sbjct: 527 EKC-----LENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDS 581
Query: 289 SEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
+ L L + T IN Y ++ AL + GE E+A+ V G + D
Sbjct: 582 EKALCLLE---TMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITY 638
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA--AGYFDAGKTERGFQCMKAA 403
+I GYC ++ A +L D+ +G ++ V+ D + MK+
Sbjct: 639 TIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSK 698
Query: 404 LSVYVEGKGW--------KPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMY 454
++ W KPD T ++ K ++QD + F + + + Y
Sbjct: 699 ENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTY 758
Query: 455 HAFIK--ANIRNGKGVDELLDSMKADGIDEDEETKEILVCTME 495
A + N+ N K L D M GI D T +L C ++
Sbjct: 759 TALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVLHCILK 801
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 146/363 (40%), Gaps = 39/363 (10%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A S+F ++KE G + TY I+ + G K+ +L E+ K+ N + I +N
Sbjct: 76 AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKD---GNLDFGI-VN 131
Query: 210 SYGARSDL---EGMEIILR------------EMESQPHIVLDWSTYASAAHFYIKANL-- 252
+ A D E ++++ M Q VL + + A + N
Sbjct: 132 LFEALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLM 191
Query: 253 --------IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACK 303
+D A + ++ + + Y I + GN +E + ++ D+E++
Sbjct: 192 NRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVT 251
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ Y T +E L G + KVL++ + D VI G+C+ ++ AE+
Sbjct: 252 PN-SFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAES 310
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
IL ++ ++G A + + +GY G + AL + KG K + +++SI
Sbjct: 311 ILREMEKQGFAPDVYVYCALISGYCMVGNLLKAL-----ALHDEMVSKGVKTNCVILSSI 365
Query: 424 LSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGI 480
L L G +V F + I + Y+ + A + GK + ELL MK +
Sbjct: 366 LQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKM 425
Query: 481 DED 483
D
Sbjct: 426 VPD 428
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 136/344 (39%), Gaps = 45/344 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+ ++ + A MK G+ + TYN ++ Y K G ++ +V+ M
Sbjct: 245 TYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIV---------LDWSTY 240
N+ PD ++Y + IN +E + EME+ P +V L+WS
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKI 364
Query: 241 ASA----------------------AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+ A +Y K +D AS+ + K EE D + YN L
Sbjct: 365 SEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM---LEALMKLGEHEEAEKVLKEWEL 335
I+ Y GN E R D ++ + D +T+ L L + + EEA K+L
Sbjct: 425 INGYCKAGNMGEAFRTMD---EMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARK 481
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G D +I+GY +G V A + +++ EK + ++ + G GKTE+
Sbjct: 482 RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
+ L G PD +IL EG V+ F
Sbjct: 542 AISKLNELLE-----SGLLPDETTYNTILHGYCREGDVEKAFQF 580
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 137/346 (39%), Gaps = 41/346 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y L+N + + +A +M E G+ + +T+N ++ Y K G+ + + +T+M
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKM 409
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD +Y IN Y ++ + EM + ++ +D T + +
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEM-GRKNMKMDSVTLNTILRTLCREKK 468
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+++A +L A +R D + Y LI Y GN L+LWD K Y
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA----------- 361
++ L + G+ E+A L E SG D N ++ GYC G V+ A
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Query: 362 -----------------EAILEDL-------VEKGKATTPNSWAVVAAGYFDAGKTERGF 397
E +LE V KGKA ++ + G+ + F
Sbjct: 589 FKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
+ +E K PD +I++ L D G +++ E F++ +
Sbjct: 649 NLLSE-----MEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 4/250 (1%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
N+K D T T +L R+++ ++A ++ G + ++Y ++ Y K G
Sbjct: 448 NMKMDSVTLNT---ILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNV 504
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
++ + EMK K I P +Y I E L E+ + ++ D +TY +
Sbjct: 505 DRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL-LESGLLPDETTYNT 563
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
H Y + ++KA K E + D N L+ G + L+L++ +
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKG 623
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
K Y T++ +L K G ++A +L E E D NA+I ++G ++ AE
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAE 683
Query: 363 AILEDLVEKG 372
+ ++EKG
Sbjct: 684 EFMSKMLEKG 693
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 132/315 (41%), Gaps = 9/315 (2%)
Query: 133 TYGALLNCYVRQRQTDK---ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T LLN VR + + F ++GI + T+N ++ Y +++ + L
Sbjct: 172 TCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFL 231
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
M N PDN +Y +++ + L +L +M+S+ ++ + +TY + Y K
Sbjct: 232 NVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSR-GLLPNRNTYNILVYGYCK 290
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ +A++V++ + D YN LI+ + G E +L D +
Sbjct: 291 MGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVS 350
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T++ ++ + EA K+L+E G + N ++ YC G + +A + +
Sbjct: 351 YNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKME 410
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E G + ++ + GY AG F+ M + K K D + +IL L
Sbjct: 411 ESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE-----MGRKNMKMDSVTLNTILRTLCR 465
Query: 430 EGSVQDVEAFVAALR 444
E +++ +++ R
Sbjct: 466 EKKLEEAYKLLSSAR 480
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 170/421 (40%), Gaps = 29/421 (6%)
Query: 28 NKTTLYSIISPLGNPGTRIEPE--LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVS 85
N TL SII G + E L+ + G + G II L RF AL
Sbjct: 385 NSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFL 444
Query: 86 DWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSN-----LKDDEKTYQ----TYGA 136
M + + P D L+ + G L E S+ + EK + T A
Sbjct: 445 REMLLRNM---RPND-----GLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNA 496
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L++ + +A+ +KM E G L +TYN ++ K G+ E+ + EM +
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
I PD F+Y + I+ L+ + E +S+ +V + TY Y KA+ I++
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR-DLVPNVYTYGVMIDGYCKADKIEEG 615
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
+ + + + + + YN LI Y GN E +L D ++ Y +++
Sbjct: 616 EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 675
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
+ +G E+A+ ++ E G + A+I GYC G + +L+++
Sbjct: 676 MCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPN 735
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQ 434
++ V+ GY +G MK A + E GKG PD + + EG ++
Sbjct: 736 KITYTVMIDGYSKSGD-------MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 788
Query: 435 D 435
+
Sbjct: 789 E 789
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 122/278 (43%), Gaps = 25/278 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ ++ + ++ +M + GI T TYN ++ + G+ ++ ++ E
Sbjct: 528 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 587
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K++++ P+ ++Y + I+ Y +E E + E+ +Q ++ L+ Y + Y +
Sbjct: 588 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ-NLELNSVVYNTLIRAYCRNGN 646
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-------LEKTACKRY 305
+A + + Y+ LI ++G + L D L C
Sbjct: 647 TVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC--- 703
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV-----IIGYCNNGLVQN 360
Y ++ KLG+ ++ VL+E +SYD PN + I GY +G ++
Sbjct: 704 ----YTALIGGYCKLGQMDKVVNVLQEM----SSYDIH-PNKITYTVMIDGYSKSGDMKT 754
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
A +L ++V KG ++ V+ G+ GK E GF+
Sbjct: 755 AAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFK 792
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 162/391 (41%), Gaps = 20/391 (5%)
Query: 113 GFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYN 170
GF +A F L + T +T LL+ V+ + +K+ F M++ G++ ++
Sbjct: 192 GFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFS 250
Query: 171 DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
+ + K G+ E + +M+ + P+ +Y I+ +L+ +E +
Sbjct: 251 TAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDE-AFRFKEKMVK 309
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
+ TY+ + +K ++A+ VLK+ E+ + + YN LI Y +GN +
Sbjct: 310 DGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGD 369
Query: 291 VLRLWDLEKTACKRYINRDYITM---LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
LR+ + IN + +T+ ++ K+G+ E+AE +L+E G S +
Sbjct: 370 ALRI---RGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 426
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
+I C N ++A L +++ + + G GK + L
Sbjct: 427 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLE-- 484
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGK 466
KG+ + +++ L G++Q+ V L +++ Y+ I + GK
Sbjct: 485 ---KGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGK 541
Query: 467 GVDE---LLDSMKADGIDEDEETKEILVCTM 494
V+E L M GI+ D T +L+ M
Sbjct: 542 -VEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 571
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 148/367 (40%), Gaps = 24/367 (6%)
Query: 111 VHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL-TY 169
V GF+S D K +G N R + A++ ++ E G+A++ +
Sbjct: 124 VSGFVSPARLLLIRLIDRKLPVLFGDPKN---RHIEIASAMADLNEVGESGVAVAAVDLL 180
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
+ C + + V + K +FP + ++S ++LE + M
Sbjct: 181 IHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ 240
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ D +++A + + K ++ A + E+ + + YN LI GN
Sbjct: 241 G--VSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 298
Query: 290 EVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
E R ++ K +N IT ++ LMKL + EA VLKE G + + + N
Sbjct: 299 EAFRF---KEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYN 355
Query: 347 AVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV--VAAGYFDAGKTERGFQCMKAAL 404
+I GYC G + +A I D+V KG PNS + + G+ G+ E+ ++ L
Sbjct: 356 TLIDGYCKMGNLGDALRIRGDMVSKG--INPNSVTLNSIIQGFCKIGQMEQAECILEEML 413
Query: 405 SVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV--AALRTVIPMNRQMYHAFIKANI 462
S +G+ +P T+I+ L + F+ LR + P N + +
Sbjct: 414 S-----RGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRP-NDGLLTTLVGGLC 467
Query: 463 RNGKGVD 469
+ GK D
Sbjct: 468 KEGKHSD 474
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K T TY +L++ + + A +M++ G+ + + Y ++ Y K GQ +K
Sbjct: 660 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 719
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
V +VL EM + +I P+ +Y + I+ Y D++ +L EM + IV D TY
Sbjct: 720 VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK-GIVPDTVTYNVLT 778
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+ + K I++ + + D I Y L+
Sbjct: 779 NGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLV 813
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 182/430 (42%), Gaps = 32/430 (7%)
Query: 77 RFSQALEVSDWMNRKGICVFAPCDHAVQ-----LDLIGRVHGFLSAESYFSNLKDDEKTY 131
+F + E + +NR I F P D L IGRV +A+ F + + T
Sbjct: 293 KFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVD---AAKDLFYRIP--KPTS 347
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKM-KEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+ L++ +V + D A + M GI TYN ++ Y K G +VL
Sbjct: 348 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLR 407
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFY 247
+M+ K P+ +SY I ++ + ++ +L EM + +P+ V ++ SA +
Sbjct: 408 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTV-GFNCLISA---F 463
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTACKRYI 306
K + I +A ++ ++ + + D +N LIS L E+ LW L + +
Sbjct: 464 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS---GLCEVDEIKHALWLLRDMISEGVV 520
Query: 307 --NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y T++ A ++ GE +EA K++ E G+ D N++I G C G V A ++
Sbjct: 521 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSL 580
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
E ++ G + S ++ G +G E + K + +G PD S++
Sbjct: 581 FEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVL-----RGSTPDIVTFNSLI 635
Query: 425 SKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVDE--LLDSMKADGID 481
+ L G ++D L+ IP + Y+ + + G D LLD DG
Sbjct: 636 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFV 695
Query: 482 EDEETKEILV 491
++ T IL+
Sbjct: 696 PNDRTWSILL 705
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 149/399 (37%), Gaps = 80/399 (20%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T T+G ++ + D ALS R M + G +++ Y ++ SK + + +L
Sbjct: 210 TLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 269
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM PD ++ ++IL K
Sbjct: 270 EEMFLMGCVPDAETFN---------------DVILG---------------------LCK 293
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ I++A+ ++ + R D I Y +L++ +G L+ N
Sbjct: 294 FDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFN-- 351
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELS-GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
T++ + G ++A+ VL + S G D N++I GY GLV A +L D+
Sbjct: 352 --TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDM 409
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTER------------------GFQCMKAALS----- 405
KG S+ ++ G+ GK + GF C+ +A
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469
Query: 406 -----VYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP----MNRQMY 454
++ E KG KPD S++S L + V +++ + LR +I N Y
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLISGLCE---VDEIKHALWLLRDMISEGVVANTVTY 526
Query: 455 HAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
+ I A +R G K +L++ M G DE T L+
Sbjct: 527 NTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLI 565
>gi|168024876|ref|XP_001764961.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683770|gb|EDQ70177.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 148/345 (42%), Gaps = 32/345 (9%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L Y R R+ +A S F M G+ + + Y+ ++ LY++ G +EK ++TEM
Sbjct: 84 TYSMMLLLYQRHRKVAEAESVFSHMLNSGVQ-AVVAYSVMIALYNREGLFEKSEQIVTEM 142
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ N+ PD ++ +N+YG + +E E I+ +E + + L Y S Y KA L
Sbjct: 143 RRNNVTPDRDNWLKQLNTYGQQGKIEEAERIMDTVE-ESGMSLGLVGYNSMITAYGKACL 201
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
DKA+ +++K E D I Y+ +I +G E L + K + + ++ T
Sbjct: 202 YDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNT 261
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ K + E +V+ E + G D + +A + Y GL+++ IL L + G
Sbjct: 262 LISLYGKAKDVEGIVRVITEMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAG 321
Query: 373 KATTPNSWAVVAAGYF----------------DAGKTERGFQC------------MKAAL 404
S+ + Y AG + + C A
Sbjct: 322 WVEETGSYGTLLHVYLKCNLPKEALRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDGAK 381
Query: 405 SVYVEGK--GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVI 447
SV+ E + G P + +++ G G V++ E +LR+ +
Sbjct: 382 SVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKEAEGLFHSLRSSV 426
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 13/201 (6%)
Query: 103 VQLDLIG------RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRK 156
V +DL G R H L F + D+ ++ T L++ Y +++ + +
Sbjct: 541 VMIDLYGKAGMPERAHKALKLAQQFGSA--DKISFST---LVHAYAKKQDFPNMEAALWE 595
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
M+ G S YN I+ Y K GQ EKV DVL M+ + D SY I IN+YG
Sbjct: 596 MQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYM 655
Query: 217 LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
+ ME + R M+ + +V D TY + Y A+ D+A K ++ D + Y
Sbjct: 656 IAEMETLFRTMQEE-GVVPDRWTYNTIIRTYGFADYPDRAVYWFKAMQDAGISPDRVTYM 714
Query: 277 FLISLYASLGNKSEVLRLWDL 297
L+S + GN E R W L
Sbjct: 715 ILVSTFERAGNIDEAAR-WCL 734
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 156/408 (38%), Gaps = 57/408 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+YG LL+ Y++ +AL F M++ G+A ++C + ++ V EM
Sbjct: 328 SYGTLLHVYLKCNLPKEALRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDGAKSVFKEM 387
Query: 193 KAKNIFP-----------------------------------DNFSYRICINSYGARSDL 217
+ + P D F+Y + IN Y R D+
Sbjct: 388 QVAGVTPSLESSCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVY-MRCDM 446
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
I + ++ + H++ D TY S K NL +A ++ + + D + N
Sbjct: 447 PEGAIKVYKLMEEDHLLPDAYTYHSMLRMCQKCNLPAQAEEIYWRLRNSDVELDEVMCNC 506
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
+++ A E+ +L+ N + M++ K G E A K LK + G
Sbjct: 507 VLNTCAKFLPLEEMHKLFQEMIDVGYVPYNITFNVMIDLYGKAGMPERAHKALKLAQQFG 566
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
++ D + ++ Y N EA L ++ G ++ ++ + Y AG+ E+
Sbjct: 567 SA-DKISFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEK-- 623
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT--VIPMNRQMYH 455
+ + +E G + D +++ G + ++E ++ V+P +R Y+
Sbjct: 624 ---VSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQEEGVVP-DRWTYN 679
Query: 456 AFIKANIRNGKGVDELLD-------SMKADGIDEDEETKEILVCTMEK 496
I+ G + D +M+ GI D T ILV T E+
Sbjct: 680 TIIRT-----YGFADYPDRAVYWFKAMQDAGISPDRVTYMILVSTFER 722
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 154/362 (42%), Gaps = 12/362 (3%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++RDL + + A V D M +G+ + + R AE+ + +
Sbjct: 246 LMRDLVRLGELASAQNVFDEMQSRGV-RRTVVSFNTMISGMCRAGDLDGAETLHRRMSEA 304
Query: 128 EKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
T TYGAL+ R + + A F KM G+ + + + ++ + K G E +
Sbjct: 305 GVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETM 364
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
++ EM+ + + PD +Y +N DL+ I+ EM S + D TY +
Sbjct: 365 LELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA-GLRPDTVTYTTLID 423
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
Y K +D A ++ + D + Y LIS + G ++ R+ A
Sbjct: 424 GYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEP 483
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
N Y +++A + G+ + ++LKE + G N ++ G+C G ++NA+ +L
Sbjct: 484 DNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLL 543
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
++ G + ++ ++ G+ GK + +K+A KG PD V TSI+
Sbjct: 544 NAMINIGVSPDDITYNILLDGHCKHGKVT-DIEELKSA-------KGTVPDLGVYTSIVG 595
Query: 426 KL 427
++
Sbjct: 596 EI 597
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 148/355 (41%), Gaps = 27/355 (7%)
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
+A + + ++ + G+ +N +M + G+ +V EM+++ + S+ I
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
+ DL+G E + R M S+ + D TY + + I+ A V +K R
Sbjct: 283 SGMCRAGDLDGAETLHRRM-SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGM 341
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEE 325
+ + + + LI + G+ +L +L + +R + D +T ++ L + + +
Sbjct: 342 KPNAVVFTILIDAHCKKGDAETML---ELHREMRERGVRPDAVTYNAIVNGLCRARDLKS 398
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
A ++ E +G DT +I GYC + A I +++V +G ++ + +
Sbjct: 399 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 458
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
G AG++ + + + G +PD T ++ +G V+ LR
Sbjct: 459 GLSKAGRSADAERVLGEMMEA-----GLEPDNTTYTMVIDAFCRKGDVK------TGLRL 507
Query: 446 VIPM-NRQMYHAFIKAN-IRNG-------KGVDELLDSMKADGIDEDEETKEILV 491
+ M N+ + N I NG K D LL++M G+ D+ T IL+
Sbjct: 508 LKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILL 562
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 138/353 (39%), Gaps = 47/353 (13%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ + L+ VR + A + F +M+ G+ + +++N ++ + G + +
Sbjct: 241 KLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRR 300
Query: 192 MKAKNIFPDNFSY---------------------RIC--------------INSYGARSD 216
M + PD ++Y ++C I+++ + D
Sbjct: 301 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 360
Query: 217 LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
E M + REM + + D TY + + +A + AS ++ + + D + Y
Sbjct: 361 AETMLELHREMRER-GVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYT 419
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEW 333
LI Y + E+ ++++ + D Y ++ L K G +AE+VL E
Sbjct: 420 TLIDGYC---KEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 476
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
+G D VI +C G V+ +L+++ KG+ ++ V+ G+ G+
Sbjct: 477 MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQM 536
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV 446
+ + A +++ G PD +L G V D+E +A TV
Sbjct: 537 KNADMLLNAMINI-----GVSPDDITYNILLDGHCKHGKVTDIEELKSAKGTV 584
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 96/226 (42%), Gaps = 10/226 (4%)
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
+N L+ LG + ++D ++ R + TM+ + + G+ + AE + +
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 302
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
+G + D A+I G C G +++A + E + G+ PN AVV DA +
Sbjct: 303 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMC--GRGMKPN--AVVFTILIDA-HCK 357
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQM 453
+G L + +G +PD +I++ L ++ V +R+ + +
Sbjct: 358 KGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 417
Query: 454 YHAFIKANIRNGKGVD---ELLDSMKADGIDEDEETKEILVCTMEK 496
Y I + + +D E+ +M A+G+ DE T L+ + K
Sbjct: 418 YTTLIDGYCKE-EELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 462
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 158/359 (44%), Gaps = 35/359 (9%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y ALL Y +A F+ +K+ G+ ++Y ++ Y ++ Q EK +V EM
Sbjct: 367 SYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEM 426
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ--PHIVLDWSTYASAAHFYIKA 250
+ + P+ SY I++YG+ + +L EME P V+ ST +A +
Sbjct: 427 RKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQT 486
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
ID VL+ A+ R + + + YN I Y S G+ + L+L+ T +N D
Sbjct: 487 TKIDT---VLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLY---ATMMASNVNPDA 540
Query: 311 IT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP------NAVIIGYCNNGLVQNA 361
+T ++ L KLG++ E+ K ++ D RIP +++I Y + A
Sbjct: 541 VTYNILISGLCKLGKYAESLKFFED------MVDLRIPLTKEVYSSLICSYVKQDKLAEA 594
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
E+ ++ G ++ + Y D G + K +EG PD + +
Sbjct: 595 ESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKE-----MEGNAILPDAIICS 649
Query: 422 SILSKL--GDE-GSVQDVEAFVAALRTVIPMNRQMYHAFIKAN--IRNGKGVDELLDSM 475
S++ L G++ G V + F+ I +N++ Y I + +R+ K E+++ +
Sbjct: 650 SLMEALNKGNQYGRVLQLMKFMH--DQCIQLNQKAYFEIIASCSMLRDWKTASEIIEHL 706
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 103/245 (42%), Gaps = 9/245 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++N KAL +KM G+ +T+N ++ + QY K M
Sbjct: 225 TYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYTKATGYFEMM 284
Query: 193 KAKNIFPDNFSYRI---CINSYGARSDLEGMEIILRE--MESQPHIVLDWSTYASAAHFY 247
K NI PD F+ I C+ G D + +RE ++ P +V TY S H Y
Sbjct: 285 KGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVV----TYTSIIHSY 340
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
++ V + + + YN L+ YAS G +E ++ L K R
Sbjct: 341 YVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDV 400
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+L A + + E+A +V E + + NA+I Y + G+ + A ++L +
Sbjct: 401 VSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHE 460
Query: 368 LVEKG 372
+ + G
Sbjct: 461 MEKDG 465
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 137/358 (38%), Gaps = 52/358 (14%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
YG ++ + R Q D+A F +M+E YN ++ +++ G + +++ +M
Sbjct: 156 YGMMIQLHARHNQVDQARGLFFEMQEWRCKPDADIYNSLINAHARAGLWRWAINIMDDML 215
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
I P +Y +N+ GA + +
Sbjct: 216 RAAIPPSRATYNNVVNACGAAGNWK----------------------------------- 240
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
KA ++ KK D + +N ++S + + ++ +++ K A I D T+
Sbjct: 241 -KALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGA---NIAPDTFTL 296
Query: 314 ---LEALMKLGEHEEAEKVLKEW--ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
+ L+K+G+H +A +L + S D ++I Y G V+N +A+ + +
Sbjct: 297 NIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMM 356
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
V +G S+ + Y G F K ++ G +PD T++L+ G
Sbjct: 357 VAEGVKPNIVSYNALLGAYASHGMHTEAFGIFK-----LLKQNGLRPDVVSYTTLLNAYG 411
Query: 429 DEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
+ E F + N+ Y+A I A G K LL M+ DGI D
Sbjct: 412 RSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPD 469
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 15/215 (6%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T + Y +L+ YV+Q + +A S F MK G LTY ++ Y+ G + V D+
Sbjct: 574 TKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLF 633
Query: 190 TEMKAKNIFPDNFSYRICINSYGA--RSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
EM+ I PD IC + A + + G + L + I L+ A+F
Sbjct: 634 KEMEGNAILPDAI---ICSSLMEALNKGNQYGRVLQLMKFMHDQCIQLN-----QKAYFE 685
Query: 248 IKAN---LID--KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
I A+ L D AS++++ + L N+L++ G +++L+ ++C
Sbjct: 686 IIASCSMLRDWKTASEIIEHLDSSLPSISVGKLNYLLNFLGKCGKTESMMKLFYKMVSSC 745
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
Y +L L+ +G+ + +VL+ E +G
Sbjct: 746 STVGLSTYKVLLRNLLAVGKWRKYVEVLQWMEDAG 780
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 156/342 (45%), Gaps = 14/342 (4%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG-RVHGFLSAESYFSNLKD 126
+I L + +RF + + + + M R+G A + V LDL G R + +S F +KD
Sbjct: 219 LISILSRARRFDEGITLFETMQREGQRGNA-VTYNVMLDLYGKRGDSWDRIQSLFQEMKD 277
Query: 127 DEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
E + TY ++ ++ +AL F++MKE G + +TYN ++ +Y K G +++
Sbjct: 278 LEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKE 337
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
++L EM+A I P+ +Y I +Y AR+ L L++ + D TY +
Sbjct: 338 ASELLVEMEAAGISPNIVTYNELIAAY-ARAGLCDEAAALKKSLLSKGLCPDEFTYCTLI 396
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
+ +A +KA + + + + + YN LI +Y + ++++++ + ++
Sbjct: 397 SAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQ---EK 453
Query: 305 YINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
D +T +L++ G E V +E + +G N +I Y G V +
Sbjct: 454 NCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYS 513
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAA 403
I + L+ G T ++A + A G+ + QC K +
Sbjct: 514 VDIYKGLLRTGLQPTVPTFAALMASLAREGRWQ---QCEKVS 552
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 176/413 (42%), Gaps = 21/413 (5%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSN 123
EL ++ L ++ ++ +ALEV +W+ + A L ++G +A F +
Sbjct: 143 ELVYFVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFES 202
Query: 124 LKDDEK---TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
LK DE Y +L++ R R+ D+ ++ F M+ G + +TYN ++ LY K G
Sbjct: 203 LKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRG 262
Query: 181 -QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
++++ + EMK I PD+++Y I + S + + +EM+ + + T
Sbjct: 263 DSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMK-EAGCCPNRVT 321
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG--NKSEVLRLWDL 297
Y + Y K + +AS++L + E + + YN LI+ YA G +++ L+ L
Sbjct: 322 YNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLL 381
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
K C Y T++ A + +E+A + E + + + N +I Y
Sbjct: 382 SKGLCPDEFT--YCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEK 439
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG---KTERGFQCMKAALSVYVEGKGWK 414
+ + + + + EK +W + + + G + F+ MK A G+
Sbjct: 440 LDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRA--------GYM 491
Query: 415 PDPKVITSILSKLGDEGSVQ-DVEAFVAALRTVIPMNRQMYHAFIKANIRNGK 466
P ++ G G V V+ + LRT + + A + + R G+
Sbjct: 492 PGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGR 544
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 23/253 (9%)
Query: 54 VKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHG 113
++ G + V ++ L + R+ Q +VS M G+ + C HA G +H
Sbjct: 521 LRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDAC-HA------GLIHS 573
Query: 114 FLSAESYFSNLK---DDEKTYQTYGALLNC------YVRQRQTDKALSHFRKMKEMGIAL 164
+ ++ +F K + EK+ + + + C Y + ++A ++ + G +
Sbjct: 574 YANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSP 633
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIIL 224
+N ++ + +K G E+ +L E++ + PD +Y ++ YG E ++
Sbjct: 634 DIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVM 693
Query: 225 REME---SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
EM P+++ TY + + Y K +D A+ V + D +N L+
Sbjct: 694 SEMRRAGKAPNLI----TYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGS 749
Query: 282 YASLGNKSEVLRL 294
Y+SLG E L +
Sbjct: 750 YSSLGLYKEALSV 762
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 103/240 (42%), Gaps = 6/240 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+ CY R D ++ ++ + G+ + T+ +M ++ G++++ V EM
Sbjct: 496 TFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEM 555
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIK 249
+ + + I+SY + + E+E QP + T+ A Y K
Sbjct: 556 AEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLA---YCK 612
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ ++A L + + D +N +IS+ A G ++L + + A +
Sbjct: 613 CGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVT 672
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ + G + +AE+V+ E +G + + N ++ Y +G + +A + D+V
Sbjct: 673 YNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMV 732
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 136/346 (39%), Gaps = 16/346 (4%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I + +R+ +ALE M RK C + + +D+ GR+ F +++
Sbjct: 395 LISAFNRAERYEKALETFTEM-RKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEK 453
Query: 128 EKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
T T+ +LL + + + FR+MK G T+N ++ Y + G +
Sbjct: 454 NCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYS 513
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
D+ + + P ++ + S + E + +EM ++ + L + +A H
Sbjct: 514 VDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEM-AEAGLQLSDACHAGLIH 572
Query: 246 FYIKANLIDKASDVLKKAEERLEQK-DGIGYNFLISLYASLGNKSEVL----RLWDLEKT 300
Y + + + + E+ +Q GI + Y G +E +L+D +
Sbjct: 573 SYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHS 632
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
+ N M+ K G E A K+L+E + D N ++ Y G+
Sbjct: 633 PDIKVFN----AMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYK 688
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE---RGFQCMKAA 403
AE ++ ++ GKA ++ + Y G+ + R F M AA
Sbjct: 689 AEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAA 734
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/151 (19%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ + A+++ ++ ++A+ ++++ + +TYN +M +Y + G Y K +V++E
Sbjct: 636 KVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSE 695
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ P+ +Y + SY ++ + +M + + D T+ + Y
Sbjct: 696 MRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAA-RVRPDNFTFNTLVGSYSSLG 754
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
L +A V++ E Q I + L+ Y
Sbjct: 755 LYKEALSVIEYMTEHGCQPTQITFKALLDGY 785
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 137/317 (43%), Gaps = 25/317 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T ++N + +T ++ +K+ + G + +TYN I+ + K G V TEM
Sbjct: 540 TCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEM 599
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P+ F+Y IN + ++++ ++ EM+++ I LD + Y + + +
Sbjct: 600 CKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNK-GIELDVTVYCALIDGFCRKGD 658
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
+ AS +L + +E + + Y+ +IS + L N L L KR IN
Sbjct: 659 MVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLH-------KRMINEGIPC 711
Query: 310 ----YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y T++ L+K G+ A ++ E G D + +I G CN G ++NA+ IL
Sbjct: 712 DLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKIL 771
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
ED+ K T + + G+F G + F+ L KG PD +++
Sbjct: 772 EDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLD-----KGLVPDDTTYDILVN 826
Query: 426 KLGDEGSVQDVEAFVAA 442
G V+D F A
Sbjct: 827 -----GKVKDGNLFSGA 838
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 139/306 (45%), Gaps = 16/306 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +LL+ ++ + +A S + KM G+ S ++YN+++ + + G + V EM
Sbjct: 435 TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEM 494
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P+ +Y + ++ Y + D E + M + D+ T + KA
Sbjct: 495 LEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDF-TCNIIINGLCKAGR 553
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
++ D LKK + + YN +I + G+ + L ++ CK ++ +
Sbjct: 554 TSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVY---TEMCKIGVSPNVFT 610
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ K + A KV+ E + G D + A+I G+C G + NA +L +L
Sbjct: 611 YTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQ 670
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSILSKL 427
E G + ++ + +G+ R Q M+AAL ++ + +G D ++ T+++S L
Sbjct: 671 EVGLSPNKVVYSSMISGF-------RKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGL 723
Query: 428 GDEGSV 433
EG +
Sbjct: 724 LKEGKL 729
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 118/289 (40%), Gaps = 15/289 (5%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
L+ Y +Q D AL F KM E GI + +TY I+ K G +K ++ +MK K
Sbjct: 334 TLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNK 393
Query: 196 NIFPDNFSYRICINSY-GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
+I P F+ I Y ARS E ++ E+ + + TY S + K +
Sbjct: 394 DISPTVFNVNSLIRGYLKARSPEEASKLF---DEAVACGIANVFTYNSLLSWLCKEGKMS 450
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDYIT 312
+A + +K + + + YN +I + G+ ++ LEK I Y
Sbjct: 451 EACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLIT--YSV 508
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ K G+ E A + + N +I G C G ++ L+ LV++G
Sbjct: 509 LMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEG 568
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
T ++ + G+ G + +AL+VY E P V T
Sbjct: 569 FIPTCMTYNCIIDGFVKEGS-------VNSALAVYTEMCKIGVSPNVFT 610
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 102/274 (37%), Gaps = 38/274 (13%)
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
D E + + LLN YV+ ++ + A+ F + E I N + K +
Sbjct: 149 DFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREA 208
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
DV +M +K + D + + I + LE E RE +++ + LD Y+
Sbjct: 209 RDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNK-GVELDARAYS---- 263
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL-RLWDLEKTACKR 304
I+A V KK + A+LG E+ + W + R
Sbjct: 264 IVIEA--------VCKKPDS----------------VAALGLLREMRDKGWVPHEVIFTR 299
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
I MK G+ EA KV E G + + ++ GYC G + +A +
Sbjct: 300 VIG--------VCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALEL 351
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ + E G ++AV+ G ++ ++
Sbjct: 352 FDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYE 385
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 8/290 (2%)
Query: 109 GRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLT 168
G +H +S ++ D + TY L++C R R+ D M +GI +T+T
Sbjct: 176 GLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGITCNTVT 235
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEM-KAKNIFPDNFSYRICINSYGARSDLEGMEIILRE- 226
YN I+ + K +E++ +L EM ++ + PD ++ I +YG +E ME +E
Sbjct: 236 YNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEF 295
Query: 227 --MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
M +P I W TY S Y KA + DK VL E+R + N +I +
Sbjct: 296 QLMGIEPDI---W-TYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGR 351
Query: 285 LGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
GN E+ + K + + Y +++ A K G+ E+ + +L++ E S DT +
Sbjct: 352 AGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPL 411
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
N +I Y G V+ + ++ E ++A + G TE
Sbjct: 412 FNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTE 461
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 9/201 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ + Y Q +K +++ + MGI TYN ++ Y K G Y+K+ VL M
Sbjct: 271 TFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFM 330
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
+ + P + I+S+G ++E ME + M+ Q P+ V TY S + Y K
Sbjct: 331 EKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSV----TYCSLVNAYGK 386
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINR 308
+ ++K +L++ E D +N LI++Y GN ++ L+ ++++ C
Sbjct: 387 SGDLEKVDSILRQIENSDVVPDTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVPD-GI 445
Query: 309 DYITMLEALMKLGEHEEAEKV 329
+ TM+ AL G E+A+++
Sbjct: 446 TFATMIRALKAQGMTEDAQRL 466
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 133/343 (38%), Gaps = 26/343 (7%)
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
TY ++ L K Q E+ + M ++ + P Y +++YG L + EM
Sbjct: 129 TYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAISTVDEM 188
Query: 228 ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY--ASL 285
+S D TY+ + D +L + + YN +I+ + A +
Sbjct: 189 KSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGITCNTVTYNTIINGFGKAKM 248
Query: 286 GNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV---LKEWELSGNSYDT 342
+ E L L +E +C D IT + G E+ EK+ KE++L G D
Sbjct: 249 FEQMESLLLEMIESDSCP----PDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPDI 304
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER------- 395
N++I Y G+ +++L + ++ + T + + + AG E
Sbjct: 305 WTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFKN 364
Query: 396 -GFQCMKAALSVY---VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMN- 450
FQ MK Y V G D + + SIL ++ + V D F +
Sbjct: 365 MKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLINVYGQAGN 424
Query: 451 -RQMYHAFIKAN----IRNGKGVDELLDSMKADGIDEDEETKE 488
R+M F++ + +G ++ ++KA G+ ED + E
Sbjct: 425 VRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEDAQRLE 467
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 105 LDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+D GR E YF N+K + TY +L+N Y + +K S R+++ +
Sbjct: 346 IDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDV 405
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR 214
T +N ++ +Y + G K+ ++ EMK PD ++ I + A+
Sbjct: 406 VPDTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQ 457
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 172/401 (42%), Gaps = 15/401 (3%)
Query: 12 QIHNAVFSRFYYTNRINKTTLYSIISPLGNP--GTRIEPELDNWVKNGNKVRVGELQRII 69
H+ + ++ + N+++ TL + + +G+ ++ ++D + N V II
Sbjct: 398 HFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPN---VEMYSTII 454
Query: 70 RDLRKRKRFSQALEVSDWMNRKGIC--VFAPCDHAVQLDLIGRVH---GFLSAESYFSNL 124
L K + S+A + M KGI V ++G++ G L+ E +
Sbjct: 455 DALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLN-EMVLKTI 513
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
D +TY L++ ++ + +A S M + + TYN +M Y + +K
Sbjct: 514 NPDVRTYTI---LVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKK 570
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
V M + PD +Y I IN + ++ + +EM Q ++V D TY+S
Sbjct: 571 AQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMH-QKNMVPDTVTYSSLV 629
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K+ I D++ + +R + D I YN LI G+ + + L++ K R
Sbjct: 630 DGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIR 689
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+ +L+ L K G ++A++V ++ G D I N +I G+C GL++ A +
Sbjct: 690 PNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTM 749
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
L + E G ++ ++ F + ++ + ++ ++
Sbjct: 750 LSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIA 790
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 104/522 (19%), Positives = 200/522 (38%), Gaps = 53/522 (10%)
Query: 12 QIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIE--PELDNWVKNGNKVRVGELQRII 69
H+ + ++ + N+++ TL + + +G+ I+ ++D + N V II
Sbjct: 84 HFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPN---VEMYNTII 140
Query: 70 RDLRKRKRFSQALEVSDWMNRKGIC--VFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
L K + S+A + M KGI V ++G++ L + LK
Sbjct: 141 DALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMV-LKTI 199
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
TY L++ ++ + +A S M + + + +TY+ +M Y + +K
Sbjct: 200 NPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQH 259
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM--ESQPHIV-----LD---- 236
V M + PD SY I IN + ++ + +EM P I+ LD
Sbjct: 260 VFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAK 319
Query: 237 ---WSTYASAAH-------------------FYIKANLIDKASDVLKKAEERLEQKDGIG 274
+ST S +H + I VL K +R +
Sbjct: 320 MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVT 379
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
N LI G + L D + Y T++ + K+G+ A K+L++ +
Sbjct: 380 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID 439
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
+ + + +I C LV A + ++ KG + +++ + G+ GK
Sbjct: 440 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGK-- 497
Query: 395 RGFQCMKAALSVYVEG--KGWKPDPKVITSILSKLGDEGSVQDVEAFVAA-LRTVIPMNR 451
+K A+ + E K PD + T ++ LG EG V++ ++ +A L+ + +
Sbjct: 498 -----LKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDV 552
Query: 452 QMYHAFIKAN--IRNGKGVDELLDSMKADGIDEDEETKEILV 491
Y+ + + K + ++M G+ D T IL+
Sbjct: 553 FTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 594
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 158/367 (43%), Gaps = 18/367 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---CLYSKTGQYEKVPDVL 189
T+ ++N + + +KA MK G + + ++YN ++ C G+ K VL
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM + P+ ++ I I+ + +L G + +EM Q ++ + TY S +
Sbjct: 285 KEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQ-DVIPNVITYNSLINGLCN 343
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
I++A + K Q + I Y+ LI+ + G E L ++D K R R
Sbjct: 344 GGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRM 403
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++A KLG+ ++ + +E E G D N +I G C NG ++ A+ + + L
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 370 EKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
KG P+ ++ ++ GY G++ + +K + G KP ++
Sbjct: 464 NKG---LPDLVTFHILMEGYCSRGESRKAAMLLKE-----MSKMGLKPRHLTYNIMMKGY 515
Query: 428 GDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNGKGVDE--LLDSMKADGIDED 483
EG+++ + + MN Y+ ++ + GK D LL+ M G+ +
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Query: 484 EETKEIL 490
T EI+
Sbjct: 576 RITYEIV 582
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 23/270 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+N + ++A+ KM G+ + +TY+ ++ + K G ++ D+ +
Sbjct: 333 TYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSV 392
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P Y + I++Y ++ + EME + IV D TY +
Sbjct: 393 KGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE-GIVPDVGTYNCLIAGLCRNGN 451
Query: 253 IDKASDVLKKAEERLEQK---DGIGYNFLISLYASLG-NKSEVLRLWDLEKTACK-RYIN 307
I+ A KK ++L K D + ++ L+ Y S G ++ + L ++ K K R++
Sbjct: 452 IEAA----KKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLT 507
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWE------LSGNSYDTRIPNAVIIGYCNNGLVQNA 361
Y M++ K G + A + + E ++ SY N ++ GY G +++A
Sbjct: 508 --YNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY-----NVLLQGYSQKGKLEDA 560
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+L +++EKG ++ +V D G
Sbjct: 561 NMLLNEMLEKGLVPNRITYEIVKEEMVDKG 590
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 141/314 (44%), Gaps = 15/314 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y AL+ Y Q + D AL + +M E G+A++ TYN ++ G+ + +++ EM
Sbjct: 220 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 279
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
K + PD F+Y I IN + +++ I M S+ + TY + + K +
Sbjct: 280 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENM-SRRGVRATVVTYTALIYALSKKGQV 338
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRD--Y 310
+ + +A R + D + YN LI+ +++ GN + ++EK KR D Y
Sbjct: 339 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK---KRIAPDDVTY 395
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T++ L LG +EA K++ E G D N +I GY G V++A I +++
Sbjct: 396 NTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 455
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG-- 428
KG T ++ + G G+ + +K + G PD S++ L
Sbjct: 456 KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE-----NGITPDDSTYISLIEGLTTE 510
Query: 429 DEGSVQDVEAFVAA 442
DE ++ D E AA
Sbjct: 511 DERAIDD-ERLAAA 523
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 1/209 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N + ++ KAL F M G+ + +TY ++ SK GQ ++ + E
Sbjct: 289 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 348
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ I PD Y INS+ +++ I+ EME + I D TY +
Sbjct: 349 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK-RIAPDDVTYNTLMRGLCLLGR 407
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+D+A ++ + ER Q D + YN LIS Y+ G+ + LR+ + Y
Sbjct: 408 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 467
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+++ L K G+ ++AE ++KE +G + D
Sbjct: 468 LIQGLCKNGQGDDAENMVKEMVENGITPD 496
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 142/347 (40%), Gaps = 15/347 (4%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A + F M + + L T T+N ++ G+ + ++L +M P+ +Y I
Sbjct: 98 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
+ +R ++ I+REM + I + TY + + K +D+A V + + E
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213
Query: 270 K-DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
K + + YN LI Y G L D Y ++ AL G EA +
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+++E G + D N +I G+C G V+ A I E++ +G T ++ +
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVI 447
G+ + + A+ +G +PD + ++++ G++ + + + I
Sbjct: 334 KKGQVQETDKLFDEAVR-----RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 388
Query: 448 PMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETKEILV 491
+ Y+ ++ G+ VDE L+D M GI D T L+
Sbjct: 389 APDDVTYNTLMRGLCLLGR-VDEARKLIDEMTERGIQPDLVTYNTLI 434
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 121/247 (48%), Gaps = 14/247 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y A+++ + AL FR+M E G++ +T+N ++ + ++E+ + EM
Sbjct: 191 VYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEM 250
Query: 193 KAKNIFPDNFSYRICINSY--GARSDLEG--MEIILREMESQPHIVLDWSTYASAAHFYI 248
+ + I D+ +Y I +Y G + L ME + + +P ++ TY++ Y
Sbjct: 251 EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVI----TYSTMIDGYA 306
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K L +A + ++ + + DGI YN ++ ++A LGN E + + + +
Sbjct: 307 KLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAH---SIRRAMEEAGFAK 363
Query: 309 DYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
D +T +L++ K G+ EA +L+E + G S + +A+I YC +G ++A A+
Sbjct: 364 DIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALF 423
Query: 366 EDLVEKG 372
+D+ + G
Sbjct: 424 QDVKKAG 430
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 136/309 (44%), Gaps = 8/309 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +L+ Y R + KA+ F MK + + + YN ++ SK G Y + EM
Sbjct: 157 VYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIFREM 215
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD ++ I++ G + E + I EME + I D TY + Y +
Sbjct: 216 LEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEER-GIARDDVTYNTLIATYCRGGQ 274
Query: 253 IDKASDVLKK-AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+ + +++ A+ + I Y+ +I YA LG E + L+ + Y
Sbjct: 275 MHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYN 334
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
TM++ +LG +EA + + E +G + D NA++ Y G + A ++LE++ ++
Sbjct: 335 TMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQR 394
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G + +++ + Y + GF AL V+ G +PD + ++++ G
Sbjct: 395 GASPNILTYSALIDAY-----CKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNG 449
Query: 432 SVQDVEAFV 440
S + A +
Sbjct: 450 SPDEALALL 458
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 2/241 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ R + ++ F +M+E GIA +TYN ++ Y + GQ ++ M
Sbjct: 226 TFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETM 285
Query: 193 -KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K+ I P +Y I+ Y + +EM +Q ++ D Y + + +
Sbjct: 286 AKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQ-NVEPDGICYNTMVDIHARLG 344
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
D+A + + EE KD + YN L+ Y G E + L + K Y
Sbjct: 345 NFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYS 404
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+++A K G H +A + ++ + +G D + + ++ G C NG A A+LE++ +
Sbjct: 405 ALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADN 464
Query: 372 G 372
G
Sbjct: 465 G 465
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E + TY +++ Y + +A++ F++M+ + + YN ++ ++++ G +++
Sbjct: 292 EPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHS 351
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAA 244
+ M+ D +Y ++SYG + +L EM+ + P+I+ TY++
Sbjct: 352 IRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNIL----TYSALI 407
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
Y K A + + ++ Q D + Y+ L+ G+ E L L LE+ A
Sbjct: 408 DAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALAL--LEEMA 462
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 8/138 (5%)
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDK 149
GIC + +D+ R+ F A S +++ K TY ALL+ Y +Q + +
Sbjct: 330 GIC------YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFRE 383
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A+S +MK+ G + + LTY+ ++ Y K G + + ++K + PD Y ++
Sbjct: 384 AMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVD 443
Query: 210 SYGARSDLEGMEIILREM 227
+ +L EM
Sbjct: 444 GCCKNGSPDEALALLEEM 461
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 105 LDLIGRVHGFLSAESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
LD G+ F A S +K + TY AL++ Y + A++ F+ +K+ G+
Sbjct: 372 LDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGL 431
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG 212
+ Y+ ++ K G ++ +L EM I P+ +Y +++YG
Sbjct: 432 QPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYG 481
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 149/363 (41%), Gaps = 11/363 (3%)
Query: 77 RFSQALEVSDWMN--RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTY 134
R Q EV+ +M R C + ++ + R A F + E +
Sbjct: 243 RAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVF 302
Query: 135 G-ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
LL + +Q ++AL+ F++ ++ G+ L TY+ +M + K G+ K +V M+
Sbjct: 303 TYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQ 362
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
PD Y + I+ G + ++ +L +M ++ I+ D TY
Sbjct: 363 KAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM-NRKGIMPDCRTYNIVIDVLSSCGRY 421
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYIT 312
+KA + R D + YN L++ L E L+D ++ C + + T
Sbjct: 422 EKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLT-TFGT 480
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ L K G E+A + G++ ++ I NA+I G+C +G V + +D++E
Sbjct: 481 LIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECS 540
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
++ ++ G+ + RG M L + +G P ++ L G
Sbjct: 541 CFPDSITYTILVLGF-----SRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQ 595
Query: 433 VQD 435
V+D
Sbjct: 596 VED 598
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 124/304 (40%), Gaps = 6/304 (1%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY 131
L K K+ +AL + + G+ V ++ +D G+ A F N++
Sbjct: 310 LCKSKQLEEALTLFQEAEQGGV-VLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMP 368
Query: 132 QT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T Y L++C +Q + D+AL M GI TYN ++ + S G+YEK
Sbjct: 369 DTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFF 428
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
MK + PD +Y +N + + EM++ + D +T+ + K
Sbjct: 429 GMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK-CMPDLTTFGTLIDTLAK 487
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR- 308
A ++ A + + + + YN LIS + G + L+ + C + +
Sbjct: 488 AGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQ-DMIECSCFPDSI 546
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ + G A ++L+E G++ N +I G V++A + +++
Sbjct: 547 TYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEM 606
Query: 369 VEKG 372
+ KG
Sbjct: 607 IAKG 610
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 40/203 (19%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPC-DHAVQLDLIGRVHGFLSAESYFSNLKD 126
+I L K+ + +ALE+ + MNRKGI C + + +D++ + A S+F +K
Sbjct: 376 LISCLGKQGKVDEALELLEDMNRKGI--MPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKR 433
Query: 127 DEKT--YQTYGALLNCYVRQRQTDKALSHFRKMK-------------------------- 158
+ + TY LLN + R+TD+A F +M+
Sbjct: 434 RKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMED 493
Query: 159 ---------EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
+MG A ++ YN ++ + ++GQ +K ++ +M + FPD+ +Y I +
Sbjct: 494 ALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVL 553
Query: 210 SYGARSDLEGMEIILREMESQPH 232
+ R +L+EM + H
Sbjct: 554 GFSRRGHTSMAMELLQEMVREGH 576
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 110/247 (44%), Gaps = 6/247 (2%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
AL+ ++ + + G+ + T ++ K G+ E + ++L E++ K + + CI
Sbjct: 2 ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE- 268
++G DL+ +L +M D + +A H+ + +++A + E +
Sbjct: 62 AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDL--EKTACK-RYINRDYITMLEALMKLGEHEE 325
D + YN LI+ Y G+ L ++ ++ +CK ++ D T++ L K+ +
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFD--TLVIFLCKMSRATD 179
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
A V +E +G D + N +I C G+++ A +L + A ++ ++
Sbjct: 180 ALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVN 239
Query: 386 GYFDAGK 392
+ AG+
Sbjct: 240 AHCRAGQ 246
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 116/324 (35%), Gaps = 45/324 (13%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMG------IALSTLTY------------------ 169
Y L+ Y + D+AL FR++K+ G ++ TL
Sbjct: 128 YNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEM 187
Query: 170 ------------NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL 217
N ++ + G + +L M A D F+Y I +N++ +
Sbjct: 188 LGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQM 247
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
+ + E+ L Y +I+ + +A+ + + + D YN
Sbjct: 248 HEVASFM-ELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNL 306
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
LI+L S E L L+ + Y +++A K G +A +V + +G
Sbjct: 307 LIALCKS-KQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAG 365
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
DT + N +I G V A +LED+ KG ++ +V G+ E+ +
Sbjct: 366 CMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAY 425
Query: 398 QCMKAALSVYVEGKGWKPDPKVIT 421
S + K K P V+T
Sbjct: 426 -------SFFGMMKRRKHSPDVVT 442
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 64/370 (17%), Positives = 142/370 (38%), Gaps = 38/370 (10%)
Query: 158 KEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF-PDNFSYRICINSYGARSD 216
++ G+ LS +T + + + + G + +L +M+ N PD ++ ++
Sbjct: 45 RQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRR 104
Query: 217 LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK-DGIGY 275
+E + +M D Y + Y KA D+A D+ ++ ++ K + + +
Sbjct: 105 VEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSF 164
Query: 276 NFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
+ L+ + ++ L ++ ++ K +N T++ +LG +A ++L
Sbjct: 165 DTLVIFLCKMSRATDALAVFQEMLGAGLKADVNV-CNTLIHCTCRLGMLRQARRLLHHMT 223
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
+ D ++ +C G + + +E G A + ++ + G+ G+
Sbjct: 224 AHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLA 283
Query: 395 RGFQ-----------------------C----MKAALSVYVEGK--GWKPDPKVITSILS 425
Q C ++ AL+++ E + G D + ++
Sbjct: 284 EATQLFESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMD 343
Query: 426 KLGDEG-SVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD---ELLDSMKADGID 481
G G + + +E F + + +Y+ I + GK VD ELL+ M GI
Sbjct: 344 AFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGK-VDEALELLEDMNRKGIM 402
Query: 482 EDEETKEILV 491
D T I++
Sbjct: 403 PDCRTYNIVI 412
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 163/366 (44%), Gaps = 17/366 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +++ Y + K + ++M+ G+ + TY+ I+ L K+G+ + VL EM
Sbjct: 147 SYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREM 206
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ +FPD+ Y I+ + + + + EME++ IV D +++ +
Sbjct: 207 MKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAR-EIVPDSIAFSALICGLSGSGK 265
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ +A + + ++ + D + Y LI Y LG E+ + + L + + + +T
Sbjct: 266 VVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLG---EMKKAFFLHNQMVQIGLTPNVVT 322
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ + L K GE + A ++L E G + N ++ G C G + A ++E++
Sbjct: 323 YTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMK 382
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E G ++ + Y+ G+ + + ++ L +G +P +++ L
Sbjct: 383 EAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLD-----RGLQPTVVTFNVLMNGLCM 437
Query: 430 EGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKA-NIRNGKGVD-ELLDSMKADGIDEDEE 485
G ++D E + + + ++P N Y++ +K IRN + E+ M A G+ D
Sbjct: 438 SGKLEDGERLLKWMLEKGIMP-NAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSN 496
Query: 486 TKEILV 491
T IL+
Sbjct: 497 TYNILI 502
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 12/263 (4%)
Query: 138 LNCYVRQRQT-DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L C +R L F + ++G+ +T +YN +M + G+ + +L M+ K
Sbjct: 81 LTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKG 140
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
PD SY I+ Y +L+ + +++EM+ + + + TY+S K+ + +
Sbjct: 141 CIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKG-LKPNLYTYSSIILLLCKSGKVVEG 199
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI---TM 313
VL++ +R D + Y LI + LGN +L+ E A R I D I +
Sbjct: 200 EKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFS-EMEA--REIVPDSIAFSAL 256
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
+ L G+ EA+K+ E G D A+I GYC G ++ A + +V+ G
Sbjct: 257 ICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIG- 315
Query: 374 ATTPN--SWAVVAAGYFDAGKTE 394
TPN ++ +A G +G+ +
Sbjct: 316 -LTPNVVTYTALADGLCKSGELD 337
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 144/354 (40%), Gaps = 22/354 (6%)
Query: 148 DKALSHFRKMKEMGIALSTLTYN-DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
++A F K+ G+ALS + N + CL SK V V +E + + SY I
Sbjct: 56 NEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNI 115
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
+NS + +L ME + I D +Y + Y + K ++K+ + +
Sbjct: 116 LMNSLFRLGKIREAHHLLMRMEFKGCIP-DVVSYTTIIDGYCHVGELQKVVQLVKEMQLK 174
Query: 267 LEQKDGIGYNFLISLYASLGNKSE---VLRLWDLEKTACKRYINRD---YITMLEALMKL 320
+ + Y+ +I L G E VLR KR + D Y T+++ KL
Sbjct: 175 GLKPNLYTYSSIILLLCKSGKVVEGEKVLR------EMMKRGVFPDHVIYTTLIDGFCKL 228
Query: 321 GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
G + A K+ E E D+ +A+I G +G V A+ + ++++KG ++
Sbjct: 229 GNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTY 288
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
+ GY G+ ++ F + + G P+ T++ L G + +
Sbjct: 289 TALIDGYCKLGEMKKAFFLHNQMVQI-----GLTPNVVTYTALADGLCKSGELDTANELL 343
Query: 441 AAL-RTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
+ R + +N Y+ + + G + +L++ MK G+ D T L+
Sbjct: 344 HEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLM 397
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 103/242 (42%), Gaps = 7/242 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++N + +A+ +MKE G+ T+TY +M Y KTG+ K ++L EM
Sbjct: 357 TYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREM 416
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + P ++ + +N LE E +L+ M + I+ + +TY S Y N
Sbjct: 417 LDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWM-LEKGIMPNAATYNSIMKQYCIRNN 475
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN---RD 309
+ ++++ + + D YN LI + N E W L K ++ N
Sbjct: 476 MRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEA---WFLHKEMVEKRFNLTASS 532
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ K + EA ++ +E G I N + G ++ + ++ +
Sbjct: 533 YNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAI 592
Query: 370 EK 371
EK
Sbjct: 593 EK 594
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 116/262 (44%), Gaps = 5/262 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL++ Y + + KA +M ++G+ + +TY + K+G+ + ++L EM
Sbjct: 287 TYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEM 346
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + + +Y +N ++ ++ EM+ + + D TY + Y K
Sbjct: 347 CRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMK-EAGLHPDTITYTTLMDAYYKTGE 405
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL--WDLEKTACKRYINRDY 310
+ KA ++L++ +R Q + +N L++ G + RL W LEK Y
Sbjct: 406 MVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAAT--Y 463
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++++ + ++ + G D+ N +I G+C ++ A + +++VE
Sbjct: 464 NSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVE 523
Query: 371 KGKATTPNSWAVVAAGYFDAGK 392
K T +S+ + G+F K
Sbjct: 524 KRFNLTASSYNALIKGFFKRKK 545
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 105/288 (36%), Gaps = 9/288 (3%)
Query: 13 IHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDL 72
+HN + N + T L + G T E L + G ++ + I+ L
Sbjct: 307 LHNQMVQIGLTPNVVTYTALADGLCKSGELDTANEL-LHEMCRKGLQLNISTYNTIVNGL 365
Query: 73 RKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDD--E 128
K QA+++ + M G+ P + +D + + A + D +
Sbjct: 366 CKAGNILQAVKLMEEMKEAGL---HPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQ 422
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
T T+ L+N + + + M E GI + TYN IM Y ++
Sbjct: 423 PTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEI 482
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
M A+ + PD+ +Y I I + +++ + +EM + L S+Y + +
Sbjct: 483 YRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEM-VEKRFNLTASSYNALIKGFF 541
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
K + +A + ++ YN + + GN L L D
Sbjct: 542 KRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCD 589
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 113/245 (46%), Gaps = 2/245 (0%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E + Y +++ ++ +T+ A+ F+ M+ G L YN I+C K G+Y++
Sbjct: 209 EPNFVLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEA 268
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
+ +MK + I P F+Y I IN + L EM+ + + D Y S + Y
Sbjct: 269 LYLDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQ-RSGCIADEVVYCSIINMY 327
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
KA L ++A + K+ + Y + + A G +E L+L+D+
Sbjct: 328 GKAGLYEEAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDVMAEKGLLTTR 387
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
+ T+L +++G+ E+A KV + +G++ N + + Y +V++AE +L +
Sbjct: 388 MTWNTLLHCFVRIGDVEQATKVYNDMVEAGSANVVTYGNMINL-YSKFQMVEDAENLLAE 446
Query: 368 LVEKG 372
+ E G
Sbjct: 447 MRESG 451
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 131/284 (46%), Gaps = 5/284 (1%)
Query: 121 FSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
F ++++ + + T L++ Y ++ + A ++ K++G+A+ T+ YN + K
Sbjct: 602 FDRMEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLK 661
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
+G + +V EM+ +I P +Y I I+ + DL G + E+ + + D
Sbjct: 662 SGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDL-GRAVQAFEVLNSSEVGADEI 720
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV-LRLWDL 297
Y+ H Y A +A+D+ ++ E + + + + YN L+ +A G +E L L D+
Sbjct: 721 AYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDM 780
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
+ C + Y+ ++ A G+ +AE +L + G D R N VI Y N G
Sbjct: 781 RRKGCPPS-SVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGK 839
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+ +A I +L G + + + D G+ E+G+Q K
Sbjct: 840 LSDACRIFYELKTVGIGLELGCFRTLVKIHLDHGQFEQGWQIYK 883
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 153/373 (41%), Gaps = 68/373 (18%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T T+ LL+C+VR ++A + M E G A + +TY +++ LYSK E ++L
Sbjct: 386 TRMTWNTLLHCFVRIGDVEQATKVYNDMVEAGSA-NVVTYGNMINLYSKFQMVEDAENLL 444
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM+ + PD + Y S Y
Sbjct: 445 AEMRESGVKPDEY------------------------------------IYGSFVKLYCN 468
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINR 308
+++IDKA+ V+++ ++ DG+ S+ N+ E+ L L+ + +N+
Sbjct: 469 SDMIDKATMVVQEMKD-----DGL---------ESVCNEREMFPLGQALQSPIDTQILNQ 514
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
I EA GE EAE +L + +G +I Y GL Q A+++ L
Sbjct: 515 LLIKRAEA----GELREAELLLDKLVEAGGCIVDTAAVLMINLYGRRGLFQKAKSLFNSL 570
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSILSK 426
+K P S V Y K + ++ A+ V+ +E G D ++ ++
Sbjct: 571 QKKDH---PPSLYV----YNTMIKLCAVCKELEEAIFVFDRMEENGRMFDAVTVSILVHA 623
Query: 427 LGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
EG +D + + V + M+ Y+ +KAN+++G KG E+ M+ I+
Sbjct: 624 YTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGEMQEADIEPS 683
Query: 484 EETKEILVCTMEK 496
+T IL+ K
Sbjct: 684 AKTYTILISLFSK 696
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 103/223 (46%), Gaps = 22/223 (9%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +++CY + +A F++M+ G + + YN+++ +++ G + + +L++M
Sbjct: 721 AYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDM 780
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF--YIKA 250
+ K P + +Y + +++YG++ E +L H++ D Y H+ I+A
Sbjct: 781 RRKGCPPSSVTYLLLMSAYGSKGKPADAESLL-------HLMQDRGLYPDCRHYNEVIRA 833
Query: 251 -NLIDKASDVLKKAEERLEQKDGIG-----YNFLISLYASLGNKSEVLRLWDLEKTACKR 304
+ K SD + E + GIG + L+ ++ G + W + K +
Sbjct: 834 YGNVGKLSDACRIFYEL--KTVGIGLELGCFRTLVKIHLDHGQFEQG---WQIYKDLSQS 888
Query: 305 Y-INRD-YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
+ ++++ Y +E + G EA+++ E + G SY + P
Sbjct: 889 FTVDQNLYGIAVELCIGAGRRTEADQLKVELKGKGFSYRDKPP 931
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 135/346 (39%), Gaps = 55/346 (15%)
Query: 144 QRQTDKALSHFRKMK-EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
QR +A F MK ++ + S + Y ++ +Y + G+ + L+EM + PD
Sbjct: 84 QRGWRQAREFFEWMKLQIPYSPSVIAYTTLLGIYGQAGKLTLAEETLSEMLDAGVEPDEV 143
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY--IKANLIDKASDVL 260
+ + +Y AR W Y + FY ++ + ++ V
Sbjct: 144 AGGCMLEAY-AR----------------------WERYDTLLEFYEAMRQRGLVPSAHVY 180
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD---LEKTACKRYINRDYITMLEAL 317
+ +++LY + S+ L LW+ +EK + Y ++ L
Sbjct: 181 R--------------TMIVTLYKA-ERHSDALMLWEDLLVEKLEPNFVL---YAIIIHIL 222
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
K G E+A K+ +G+ D + N +I G Q +EA+ D+ ++G +
Sbjct: 223 NKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLDMKKQGIVPSK 282
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
++ ++ + AG+ + + ++ G D V SI++ G G ++ E
Sbjct: 283 FTYTIMINVWSKAGRFASAAETLAE-----MQRSGCIADEVVYCSIINMYGKAGLYEEAE 337
Query: 438 AFVAALRTV-IPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGI 480
+ T+ + + + Y + K G+ + +L D M G+
Sbjct: 338 KIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDVMAEKGL 383
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 141/314 (44%), Gaps = 15/314 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y AL+ Y Q + D AL + +M E G+A++ TYN ++ G+ + +++ EM
Sbjct: 594 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 653
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
K + PD F+Y I IN + +++ I M S+ + TY + + K +
Sbjct: 654 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENM-SRRGVRATVVTYTALIYALSKKGQV 712
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRD--Y 310
+ + +A R + D + YN LI+ +++ GN + ++EK KR D Y
Sbjct: 713 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK---KRIAPDDVTY 769
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T++ L LG +EA K++ E G D N +I GY G V++A I +++
Sbjct: 770 NTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 829
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG-- 428
KG T ++ + G G+ + +K + G PD S++ L
Sbjct: 830 KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE-----NGITPDDSTYISLIEGLTTE 884
Query: 429 DEGSVQDVEAFVAA 442
DE ++ D E AA
Sbjct: 885 DERAIDD-ERLAAA 897
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 1/209 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N + ++ KAL F M G+ + +TY ++ SK GQ ++ + E
Sbjct: 663 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 722
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ I PD Y INS+ +++ I+ EME + I D TY +
Sbjct: 723 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK-RIAPDDVTYNTLMRGLCLLGR 781
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+D+A ++ + ER Q D + YN LIS Y+ G+ + LR+ + Y
Sbjct: 782 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 841
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+++ L K G+ ++AE ++KE +G + D
Sbjct: 842 LIQGLCKNGQGDDAENMVKEMVENGITPD 870
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 142/347 (40%), Gaps = 15/347 (4%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A + F M + + L T T+N ++ G+ + ++L +M P+ +Y I
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 527
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
+ +R ++ I+REM + I + TY + + K +D+A V + + E
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587
Query: 270 K-DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
K + + YN LI Y G L D Y ++ AL G EA +
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+++E G + D N +I G+C G V+ A I E++ +G T ++ +
Sbjct: 648 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 707
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVI 447
G+ + + A+ +G +PD + ++++ G++ + + + I
Sbjct: 708 KKGQVQETDKLFDEAVR-----RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 762
Query: 448 PMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETKEILV 491
+ Y+ ++ G+ VDE L+D M GI D T L+
Sbjct: 763 APDDVTYNTLMRGLCLLGR-VDEARKLIDEMTERGIQPDLVTYNTLI 808
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 147/341 (43%), Gaps = 26/341 (7%)
Query: 109 GRVHGFLSAESYFSNLKD--DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
GRVH L A F + D + T ++Y ++ V + Q A+S ++ M+EMG+ S
Sbjct: 96 GRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSV 155
Query: 167 LTYNDIM-CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
++ N ++ L +G + ++ EM + PD+++Y IN + + +
Sbjct: 156 VSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFK 215
Query: 226 EMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
EM+++ P +V TY+ H +A +D+A + K +++ + + Y+ L+
Sbjct: 216 EMDTKGCSPSVV----TYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGL 271
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINR--DYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
G E + L LE KR+ Y T++ L K G+ EA + L +L G
Sbjct: 272 CKNGGSLEAMEL--LEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKP 329
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV-------VAAGYFDAGKT 393
D + +I G+CN Q A L+++V + +W++ V G G
Sbjct: 330 DAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNL 389
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
R FQ L + + +G D S++ +G +
Sbjct: 390 NRSFQ-----LYIGMRTRGISIDAGTFDSLVKCFCKKGDLH 425
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 128/284 (45%), Gaps = 19/284 (6%)
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
D +Y TYG L+N + +T +A F++M G + S +TY+ +M + G ++
Sbjct: 188 DPDSY-TYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAM 246
Query: 187 DVLTEMKAKNIFPDNFSYR-----ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
+ +MK K I P+ F+Y +C N G+ +E +E+++R+ +P++V TY+
Sbjct: 247 GLFDKMKKKAIEPNVFTYSSLMDGLCKNG-GSLEAMELLEMMVRK-RHKPNMV----TYS 300
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD---LE 298
+ + K + +A + L + + + + D Y +I+ + ++ E D L
Sbjct: 301 TLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLG 360
Query: 299 KTACKRYINRDYITM----LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
+ + R ++ + ++ L G + ++ G S D ++++ +C
Sbjct: 361 QISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCK 420
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
G + A I +++V G W+ V G++D K F+
Sbjct: 421 KGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFE 464
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 121/247 (48%), Gaps = 14/247 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y A+++ + AL FR+M E G++ +T+N ++ + ++E+ + EM
Sbjct: 192 VYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEM 251
Query: 193 KAKNIFPDNFSYRICINSY--GARSDLEG--MEIILREMESQPHIVLDWSTYASAAHFYI 248
+ + I D+ +Y I +Y G + L ME + + +P ++ TY++ Y
Sbjct: 252 EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVI----TYSTMIDGYA 307
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K L +A + ++ + + DGI YN ++ ++A LGN E + + + +
Sbjct: 308 KLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAH---SIRRAMEEAGFAK 364
Query: 309 DYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
D +T +L++ K G+ EA +L+E + G S + +A+I YC +G ++A A+
Sbjct: 365 DIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALF 424
Query: 366 EDLVEKG 372
+D+ + G
Sbjct: 425 QDVKKAG 431
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 136/309 (44%), Gaps = 8/309 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +L+ Y R + KA+ F MK + + + YN ++ SK G Y + EM
Sbjct: 158 VYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIFREM 216
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD ++ I++ G + E + I EME + I D TY + Y +
Sbjct: 217 LEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEER-GIARDDVTYNTLIATYCRGGQ 275
Query: 253 IDKASDVLKK-AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+ + +++ A+ + I Y+ +I YA LG E + L+ + Y
Sbjct: 276 MHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYN 335
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
TM++ +LG +EA + + E +G + D NA++ Y G + A ++LE++ ++
Sbjct: 336 TMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQR 395
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G + +++ + Y + GF AL V+ G +PD + ++++ G
Sbjct: 396 GASPNILTYSALIDAY-----CKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNG 450
Query: 432 SVQDVEAFV 440
S + A +
Sbjct: 451 SPDEALALL 459
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 2/241 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ R + ++ F +M+E GIA +TYN ++ Y + GQ ++ M
Sbjct: 227 TFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETM 286
Query: 193 -KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K+ I P +Y I+ Y + +EM +Q ++ D Y + + +
Sbjct: 287 AKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQ-NVEPDGICYNTMVDIHARLG 345
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
D+A + + EE KD + YN L+ Y G E + L + K Y
Sbjct: 346 NFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYS 405
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+++A K G H +A + ++ + +G D + + ++ G C NG A A+LE++ +
Sbjct: 406 ALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADN 465
Query: 372 G 372
G
Sbjct: 466 G 466
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E + TY +++ Y + +A++ F++M+ + + YN ++ ++++ G +++
Sbjct: 293 EPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHS 352
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAA 244
+ M+ D +Y ++SYG + +L EM+ + P+I+ TY++
Sbjct: 353 IRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNIL----TYSALI 408
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
Y K A + + ++ Q D + Y+ L+ G+ E L L LE+ A
Sbjct: 409 DAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALAL--LEEMA 463
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 8/138 (5%)
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDK 149
GIC + +D+ R+ F A S +++ K TY ALL+ Y +Q + +
Sbjct: 331 GIC------YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFRE 384
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A+S +MK+ G + + LTY+ ++ Y K G + + ++K + PD Y ++
Sbjct: 385 AMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVD 444
Query: 210 SYGARSDLEGMEIILREM 227
+ +L EM
Sbjct: 445 GCCKNGSPDEALALLEEM 462
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 105 LDLIGRVHGFLSAESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
LD G+ F A S +K + TY AL++ Y + A++ F+ +K+ G+
Sbjct: 373 LDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGL 432
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG 212
+ Y+ ++ K G ++ +L EM I P+ +Y +++YG
Sbjct: 433 QPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYG 482
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 177/414 (42%), Gaps = 22/414 (5%)
Query: 80 QALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAES--YFSNLKDD--EKTYQTYG 135
+ALEV M KG+ P H L + G S E+ F ++ TY
Sbjct: 294 EALEVKKLMMEKGL---GPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
AL++ ++++ ++AL +M G+ L+ +TYN ++ +K G+ K + EM
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA 410
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
I PD ++Y + I+ Y D+ +L EM+++ + TY+ ++ + K
Sbjct: 411 GIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR-KLTPSPFTYSVLISGLCHSSDLQK 469
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YIT 312
A++VL + + + Y LI Y +S +L K + D Y
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYV---QESRYEMAIELLKIMIANGVLPDLFCYNC 526
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ L + + EEA+ +L + G + A I Y +G +Q AE +D++ G
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
+ ++ G+ D G T K L KG PD + ++I+ L G
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE-----KGLIPDIRAYSAIIHSLSKNGK 641
Query: 433 VQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
++ + F+ L+T + + +Y++ I + G + +L D M +GI+ +
Sbjct: 642 TKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN 695
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 190/461 (41%), Gaps = 39/461 (8%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
LD ++NG K V +I+ + R+ A+E+ M G+ C + + + L
Sbjct: 474 LDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC- 532
Query: 110 RVHGFLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
R A+ ++ K + TYGA +N Y + + A +F+ M GI + +
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILRE 226
Y ++ + G + M K + PD +Y I+S E M + L+
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKF 652
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL- 285
+++ +V D Y S + K I+KAS + + + + YN LI+ Y
Sbjct: 653 LKTG--VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCK 710
Query: 286 -GNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
GN +E +L+D + I+ D Y +++ K G E+A + E +
Sbjct: 711 SGNLTEAFKLFD---EMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSL 767
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQC 399
+ N++I +C +G V A + +D+V+ K TPN ++ ++ Y A E Q
Sbjct: 768 SAF-NSLIDSFCKHGKVIEARELFDDMVD--KKLTPNIVTYTILIDAYGKAEMMEEAEQ- 823
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGS-------VQDVEAFVAALRTVIPMNRQ 452
L + +E + P+ TS+L G+ +D+EA A +
Sbjct: 824 ----LFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAI------ 873
Query: 453 MYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
Y A + GK ++ +LL+ +GI +++ + L+
Sbjct: 874 AYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALI 914
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 129/309 (41%), Gaps = 13/309 (4%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ Y A+++ + +T +A+ F K + G+ YN ++ + K G EK + E
Sbjct: 627 RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686
Query: 192 MKAKNIFPDNFSYRICINSYG--ARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
M I P+ Y IN YG +L + EM S+ I D Y K
Sbjct: 687 MLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISK-GISPDGYIYCILIDGCGK 745
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYIN 307
++KA + +A+++ +N LI + G E L+D ++K +
Sbjct: 746 EGNLEKALSLFHEAQQK-SVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVT 804
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y +++A K EEAE++ + E +T ++++ Y G ++ +D
Sbjct: 805 --YTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKD 862
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ +G A ++ V+A+ Y GK+ + + +L VEG + D V +++ L
Sbjct: 863 MEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSL---VEGIKLEDD--VFDALIFHL 917
Query: 428 GDEGSVQDV 436
E + V
Sbjct: 918 CKEKQISTV 926
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 129/313 (41%), Gaps = 25/313 (7%)
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ--PHIVLDW 237
G + KV + E K I PD ++Y I ++ D+ +++L EME + P++
Sbjct: 224 GLFWKVYGSMVEAK---IVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLF--- 277
Query: 238 STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
TY + + +D+A +V K E+ DG Y L+ + E +++
Sbjct: 278 -TYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFES 336
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
++ Y +++ +K G EEA ++ E G + NA+I G G
Sbjct: 337 MPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGE 396
Query: 358 VQNAEAILEDLVEKGKATTPNSWA--VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK- 414
+ A ++ +++ G P++W ++ GY + M A + E K K
Sbjct: 397 MAKAMSLFNEMLMAG--IEPDTWTYNLLIDGYLKSHD-------MAKACELLAEMKARKL 447
Query: 415 -PDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDE 470
P P + ++S L +Q E +R + N MY IKA ++ + E
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507
Query: 471 LLDSMKADGIDED 483
LL M A+G+ D
Sbjct: 508 LLKIMIANGVLPD 520
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 115/284 (40%), Gaps = 13/284 (4%)
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA--LSHFRK----MKEMGIA 163
RV GFL+ S E + T L+ C R KA + F K M E I
Sbjct: 183 RVLGFLNEASSVFIASISEGFFPT---LICCNNLMRDLLKANMMGLFWKVYGSMVEAKIV 239
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEI 222
TY +++ + K G K VL+EM+ K P+ F+Y I + E +E+
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEV 298
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+++ + + D TY + K +A + + + Y LI +
Sbjct: 299 --KKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGF 356
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
GN E LR+ D T + Y M+ + K GE +A + E ++G DT
Sbjct: 357 IKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDT 416
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
N +I GY + + A +L ++ + +P +++V+ +G
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 141/314 (44%), Gaps = 15/314 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y AL+ Y Q + D AL + +M E G+A++ TYN ++ G+ + +++ EM
Sbjct: 589 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 648
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
K + PD F+Y I IN + +++ I M S+ + TY + + K +
Sbjct: 649 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENM-SRRGVRATVVTYTALIYALSKKGQV 707
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRD--Y 310
+ + +A R + D + YN LI+ +++ GN + ++EK KR D Y
Sbjct: 708 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK---KRIAPDDVTY 764
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T++ L LG +EA K++ E G D N +I GY G V++A I +++
Sbjct: 765 NTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 824
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG-- 428
KG T ++ + G G+ + +K + G PD S++ L
Sbjct: 825 KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE-----NGITPDDSTYISLIEGLTTE 879
Query: 429 DEGSVQDVEAFVAA 442
DE ++ D E AA
Sbjct: 880 DERAIDD-ERLAAA 892
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 1/209 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N + ++ KAL F M G+ + +TY ++ SK GQ ++ + E
Sbjct: 658 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 717
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ I PD Y INS+ +++ I+ EME + I D TY +
Sbjct: 718 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK-RIAPDDVTYNTLMRGLCLLGR 776
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+D+A ++ + ER Q D + YN LIS Y+ G+ + LR+ + Y
Sbjct: 777 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 836
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+++ L K G+ ++AE ++KE +G + D
Sbjct: 837 LIQGLCKNGQGDDAENMVKEMVENGITPD 865
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 142/347 (40%), Gaps = 15/347 (4%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A + F M + + L T T+N ++ G+ + ++L +M P+ +Y I
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 522
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
+ +R ++ I+REM + I + TY + + K +D+A V + + E
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582
Query: 270 K-DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
K + + YN LI Y G L D Y ++ AL G EA +
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+++E G + D N +I G+C G V+ A I E++ +G T ++ +
Sbjct: 643 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 702
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVI 447
G+ + + A+ +G +PD + ++++ G++ + + + I
Sbjct: 703 KKGQVQETDKLFDEAVR-----RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 757
Query: 448 PMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETKEILV 491
+ Y+ ++ G+ VDE L+D M GI D T L+
Sbjct: 758 APDDVTYNTLMRGLCLLGR-VDEARKLIDEMTERGIQPDLVTYNTLI 803
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 196/469 (41%), Gaps = 57/469 (12%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I K +ALE M G+ H + + G+L + + LK
Sbjct: 379 LIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTI-------IQGWLKGQKHEEALKLF 431
Query: 128 EKTYQTYGA-------LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+++++T A +L+ +Q + DKA RKM+ GI + ++YN++M + +
Sbjct: 432 DESFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKK 491
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ V + M K + P+N++Y I I+ D + + ++ +M S +I ++ Y
Sbjct: 492 NMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSS-NIEVNGVVY 550
Query: 241 ASAAHFYIKANLIDKASDVLKKA-EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
+ + K KA ++L EE+ + YN +I + G + ++
Sbjct: 551 QTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYE--- 607
Query: 300 TACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
C I+ + IT +++ L K ++A ++ E + G D A+I G+C
Sbjct: 608 EMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKS 667
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT-----------ERGFQCMKAALS 405
+++A A+ +L+E+G + + + +G+ + G + G +C +
Sbjct: 668 NMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 727
Query: 406 VYVEG-------------------KGWKPDPKVITSILSKLGDEGS-VQDVEAFVAALRT 445
++G G PD + T I++ L +G V+ V+ F +
Sbjct: 728 TLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKN 787
Query: 446 VIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETKEILV 491
+ N +Y+A I + R G +DE L D M GI D T +ILV
Sbjct: 788 NVTPNVLIYNAVIAGHYREGN-LDEAFRLHDEMLDKGILPDGATFDILV 835
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 22/236 (9%)
Query: 56 NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFL 115
NG V ++ L K R QALE+ D M KG+ + P A+ +HGF
Sbjct: 612 NGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGAL-------IHGFC 664
Query: 116 ------SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
SA + FS L ++ + Y +L++ + AL ++KM + G+
Sbjct: 665 KKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLG 724
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
TY ++ K G D+ TEM+A + PD Y + +N + + + EM
Sbjct: 725 TYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEM 784
Query: 228 ESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
+ P++++ A A Y + NL D+A + + ++ DG ++ L+S
Sbjct: 785 KKNNVTPNVLI---YNAVIAGHYREGNL-DEAFRLHDEMLDKGILPDGATFDILVS 836
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/373 (19%), Positives = 152/373 (40%), Gaps = 37/373 (9%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
+L+ + + AL F KM+ G + +++T++ ++ +SK G+ EK + +M++
Sbjct: 343 SLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESL 402
Query: 196 NIFPDNFSYRICINSY--GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ P F I + G + + E +++ E+ V +T S + K I
Sbjct: 403 GLTPSVFHVHTIIQGWLKGQKHE-EALKLFDESFETGLANVFICNTILS---WLCKQGKI 458
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI------- 306
DKA+++L+K E R + + YN ++ + N DL +T +
Sbjct: 459 DKATELLRKMESRGIGPNVVSYNNVMLAHCRKKN-------MDLARTVFSNMLEKGLKPN 511
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
N Y +++ K + + +V+ + S + + +I G C G A +L
Sbjct: 512 NYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLA 571
Query: 367 DLVEKGK-ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSI 423
+++E+ + + S+ + G+ G+ M A++ Y E G P+ TS+
Sbjct: 572 NMIEEKRFCVSCMSYNSIIDGFIKEGE-------MDYAVAAYEEMCANGISPNVITYTSL 624
Query: 424 LSKLG-----DEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKAD 478
+ L D+ E ++ IP + H F K + N + L + +
Sbjct: 625 MDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKS--NMESASALFSELLEE 682
Query: 479 GIDEDEETKEILV 491
G++ + L+
Sbjct: 683 GLNPSQPVYNSLI 695
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 138/322 (42%), Gaps = 54/322 (16%)
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKM-KEMGIALSTLTYNDIMCLYSKTG 180
SN++ + YQT ++N + QT KA M +E +S ++YN I+ + K G
Sbjct: 541 SNIEVNGVVYQT---IINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEG 597
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ + EM A I P+ +Y ++ + ++ + EM+++ + LD Y
Sbjct: 598 EMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNK-GVKLDIPAY 656
Query: 241 ASAAHFYIKANLIDKASDVLKKA-EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
+ H + K + ++ AS + + EE L + YN LIS + +LGN L DL K
Sbjct: 657 GALIHGFCKKSNMESASALFSELLEEGLNPSQPV-YNSLISGFRNLGNMVAAL---DLYK 712
Query: 300 TACKRYINRD---YITMLEALMK-----------------------------------LG 321
K + D Y T+++ L+K G
Sbjct: 713 KMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKG 772
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+ + K+ +E + + + + I NAVI G+ G + A + +++++KG ++
Sbjct: 773 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 832
Query: 382 VVAAGYFDAGKTERGFQCMKAA 403
++ +G GK FQ ++AA
Sbjct: 833 ILVSG--KVGK----FQPIRAA 848
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 114/294 (38%), Gaps = 47/294 (15%)
Query: 117 AESYFSNLKDDEKTY------QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYN 170
A SNL D K + + + LLN Y + RQTD A+ +M E+G+ N
Sbjct: 142 ASVLVSNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVN 201
Query: 171 DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
+ + + ++ + M A + DN + ++ + R+ L E +
Sbjct: 202 RTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLM-----RASLR---------EEK 247
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA---SLGN 287
P +A +V +A ER + D + Y+ + +L
Sbjct: 248 PA----------------------EALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAM 285
Query: 288 KSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
+ +LR EK C Y +++ A +K G E+A + E G S + +
Sbjct: 286 ANSLLREMK-EKKLCVPS-QETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATS 343
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+I G+C N + +A + + +G + +++V+ + G+ E+ + K
Sbjct: 344 LITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYK 397
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 157/389 (40%), Gaps = 44/389 (11%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPC-----DHAVQLDLIGRVHGFLSAESYFS 122
++ L K R A + D M R G+ + A C D V+ GRV L
Sbjct: 137 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILE----IM 192
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
+ E T TY L++ R K + F +MK + Y ++ Y + G
Sbjct: 193 ENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNM 252
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
+ VL E + P+ +Y + I + +E E++L +M+ Q + L+ + +
Sbjct: 253 RRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQ-GVGLNQIIFNT 311
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQK--------------------DGIGYNFLISLY 282
Y + ++D A + K A E++ + + + Y LIS++
Sbjct: 312 MIDGYCRKGMVDDALKI-KAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIH 370
Query: 283 ASLGNKSEVLRLWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
G+ E RL+ EK A + Y M+ K G EAE+ KE E G
Sbjct: 371 CKDGDMVEARRLFREMAEKGATPSVLT--YSVMIHGYAKKGRIREAERFRKEMEKKGFVP 428
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQ 398
D +++ G+C NG V A + E++ ++G T PN ++ + +G G++E FQ
Sbjct: 429 DVYTYASLVHGHCVNGKVDVALKLFEEMKQRG--TEPNVVAYTALISGLAKEGRSEAAFQ 486
Query: 399 CMKAALSVYVEGKGWKPDPKVITSILSKL 427
L G PD + ++++ L
Sbjct: 487 LYDDMLKA-----GLIPDDSLYSALVGSL 510
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 102/478 (21%), Positives = 185/478 (38%), Gaps = 82/478 (17%)
Query: 54 VKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHG 113
V+ + V E + + + K+K++S A+ + + Q+DL G H
Sbjct: 88 VRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCN-----------------QMDLFGVTHN 130
Query: 114 FLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
S L+NC R D A+S KM ++GI +T+N ++
Sbjct: 131 VYS-----------------LNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLI 173
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQ 230
G+ ++ + EM P+ SY IN + + R+ME +
Sbjct: 174 NGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGK 233
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
P++V TY + K L+++A + L + +R D + YN ++ + SLG +E
Sbjct: 234 PNVV----TYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNE 289
Query: 291 VLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
RL+ K R + D +T +++ L K G EA V + G + NA
Sbjct: 290 ATRLF---KEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNA 346
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK-----------TERG 396
++ GYC + + A +L ++ KG A +S+ ++ GY + + +E+
Sbjct: 347 LMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKN 406
Query: 397 FQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL------------- 443
S ++G P+ ++ ++ G + D+ A+ L
Sbjct: 407 LTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEAL 466
Query: 444 --------RTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETKEILV 491
R + P N +Y I+ GK EL + ADGI D T +++
Sbjct: 467 KLLKEMHERRIKP-NIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMI 523
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 154/368 (41%), Gaps = 21/368 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ + R ++A+ +M + GI +TYN I+ + GQ + + EM
Sbjct: 238 TYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEM 297
Query: 193 KAKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+N+ PD ++ I ++ G S+ + + E ++P + TY + Y
Sbjct: 298 VGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEP----NAYTYNALMDGYCL 353
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYIN 307
N +D+A VL + + YN LI+ Y +E RL EK +
Sbjct: 354 HNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVT 413
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+++ L ++G EA + KE SG D + ++ G+C +G + A +L++
Sbjct: 414 --YSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKE 471
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ E+ + ++ G F AGK E + L + G +PD ++ L
Sbjct: 472 MHERRIKPNIILYTILIRGMFIAGKLE-----VAKELFSKLSADGIRPDIWTYNVMIKGL 526
Query: 428 GDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRN--GKGVDELLDSMKADGIDED 483
EG + F + +P + Y+ I+ ++N +L+D M D
Sbjct: 527 LKEGLSDEAYEFFRKMEDDGFLP-DSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSAD 585
Query: 484 EETKEILV 491
T ++L+
Sbjct: 586 SSTFQMLL 593
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 1/247 (0%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K E TY AL++ Y Q D+A+ M G A + +YN ++ Y K+ + +
Sbjct: 335 KGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNE 394
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
+L+EM KN+ PD +Y + + +EM S ++ D Y+
Sbjct: 395 AKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSG-LLPDLMAYSILL 453
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
+ K +D+A +LK+ ER + + I Y LI G L+ R
Sbjct: 454 DGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIR 513
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y M++ L+K G +EA + ++ E G D+ N +I G+ N A +
Sbjct: 514 PDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQL 573
Query: 365 LEDLVEK 371
++++V K
Sbjct: 574 IDEMVGK 580
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 123/273 (45%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T + Y + + AL +M +MG+ ++ + Y+ +M Y + GQ +L +
Sbjct: 245 TVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSL 304
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P+ +Y + + Y ++E E +++E+ +V+D + + + + Y +
Sbjct: 305 PGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGR 364
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
++ A+ +L + + Q + YN +I+ Y LG E + R Y +
Sbjct: 365 MEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNS 424
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ K G +A + +G + T NA++ G+C+ G + +A + +++KG
Sbjct: 425 LVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKG 484
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
A S + + G+F +GKTE+ K L+
Sbjct: 485 IAPNEISCSTLLDGFFKSGKTEKALNLWKETLA 517
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 164/409 (40%), Gaps = 37/409 (9%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAV--------QLDLIGRVHGFLSAESYFSNLK 125
K K ALE + M + G+ V HAV Q + R+ L + N+
Sbjct: 255 KVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNI- 313
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKA---LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
TY L+ Y ++ ++A + RK K++ + + ++ Y + G+
Sbjct: 314 ------VTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQL--VVDEAVFGAVINGYCQMGRM 365
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
E +L EM + + F Y I IN Y + IL EM + D +Y S
Sbjct: 366 EDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGV-GVRPDTYSYNS 424
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
Y K L++KA + + YN L+ + SLG+ + LRLW L
Sbjct: 425 LVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFL---ML 481
Query: 303 KRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
K+ I + I T+L+ K G+ E+A + KE G + +T N VI G C +
Sbjct: 482 KKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMP 541
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
AE +++ + + ++ + +GY G +R + + +E G+ P +
Sbjct: 542 EAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNE-----LENLGFAPTIEF 596
Query: 420 ITSILSK---LGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG 465
S+++ G V D+ F + R + P N Y A I + G
Sbjct: 597 FNSLITGHFIAKQHGKVNDI-LFEMSNRGLSP-NTVAYGALIAGWCKEG 643
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 175/440 (39%), Gaps = 61/440 (13%)
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
KG C D A++L + G E S L D + + +T+KA
Sbjct: 462 KGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDG-------------FFKSGKTEKA 508
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
L+ +++ G+A +T T+N ++ K + + +++ +MK PD +YR +
Sbjct: 509 LNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSG 568
Query: 211 YGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
Y D++ IL E+E+ P I ++ HF K + K +D+L + R
Sbjct: 569 YCKIGDMDRASRILNELENLGFAPTI--EFFNSLITGHFIAKQH--GKVNDILFEMSNRG 624
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI--TMLEALMKLGEHEE 325
+ + Y LI+ + G+ L+ LE K + +I +++ + G+ +E
Sbjct: 625 LSPNTVAYGALIAGWCKEGDLHTAYNLY-LEMIE-KGLVPNLFICSSLVSCFYRKGKFDE 682
Query: 326 AEKVLK-------------------------EWELSGNSYDTRIP-NAVIIGYCNNGLVQ 359
A VL+ + GN + +I N VI G C G ++
Sbjct: 683 ANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIE 742
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
+A+ +L DL +KG +++ + G +G + F LSV G P+
Sbjct: 743 DAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSV-----GLTPNIVT 797
Query: 420 ITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVD--ELLDSMK 476
S++ L G + + L T I N Y+ I + ++G + +L M
Sbjct: 798 YNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMI 857
Query: 477 ADGIDEDEETKEILV---CT 493
+GI T IL+ CT
Sbjct: 858 EEGIHPTVFTYSILINGLCT 877
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 155/408 (37%), Gaps = 59/408 (14%)
Query: 117 AESYFSNLKDDEKTYQ----TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI 172
A F +L + K + ++ LL Q D AL F +M+ +G LS + N I
Sbjct: 155 APPLFPHLVEVYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSI 214
Query: 173 MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY----GARSDLE--------GM 220
+ ++TG V +M+ PD F+ I +Y G LE G+
Sbjct: 215 LNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGV 274
Query: 221 EIIL--------------------REMES------QPHIVLDWSTYASAAHFYIKANLID 254
E+ L R ++S P+IV TY Y ++
Sbjct: 275 EVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIV----TYTLLVKGYCNEKNME 330
Query: 255 KASDVLK--KAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR-DYI 311
+A V++ + ++L + + + +I+ Y +G + RL + E + +N Y
Sbjct: 331 EAEGVVQEIRKNKQLVVDEAV-FGAVINGYCQMGRMEDAARLLN-EMVDSRLQVNLFVYN 388
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
M+ KLG EA +L E G DT N+++ GYC GL+ A ++
Sbjct: 389 IMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRN 448
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G A T ++ + G+ G + + L + KG P+ +++L G
Sbjct: 449 GFAATTLTYNALLKGFCSLGSIDDALR-----LWFLMLKKGIAPNEISCSTLLDGFFKSG 503
Query: 432 SVQD-VEAFVAALRTVIPMNRQMYHAFIKA--NIRNGKGVDELLDSMK 476
+ + + L + N ++ I I +EL+D MK
Sbjct: 504 KTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMK 551
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 112/261 (42%), Gaps = 3/261 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +L++ Y ++ +KA + M G A +TLTYN ++ + G + + M
Sbjct: 421 SYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLM 480
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K I P+ S ++ + E + +E ++ + + +T+ + + K
Sbjct: 481 LKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLAR-GLAKNTTTFNTVINGLCKIER 539
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYI 311
+ +A +++ K ++ D I Y L S Y +G+ R+ +LE I +
Sbjct: 540 MPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEF-FN 598
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+++ +H + +L E G S +T A+I G+C G + A + +++EK
Sbjct: 599 SLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEK 658
Query: 372 GKATTPNSWAVVAAGYFDAGK 392
G + + + ++ GK
Sbjct: 659 GLVPNLFICSSLVSCFYRKGK 679
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+ + + +A+S F+K+ GI+ + +TYN ++ + K G + + M
Sbjct: 797 TYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRM 856
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWST---YASAAHF 246
+ I P F+Y I IN + +E +L +M P+ V W+ Y
Sbjct: 857 IEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESV 916
Query: 247 YIKANLIDKASDVLKKAEERLEQKDG 272
+ +D+++ V+K + R ++ G
Sbjct: 917 DVPIMPLDQSTIVVKASPRRAVRRPG 942
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 1/166 (0%)
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
+ +N ++ K G+ E ++L ++K K DNF+Y I+ A S + LR+
Sbjct: 726 IMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSA-SGFVDVAFDLRD 784
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
+ + TY S + K+ + +A + KK + + I YN LI + G
Sbjct: 785 TMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDG 844
Query: 287 NKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
+E +L Y ++ L G EEA K+L +
Sbjct: 845 YITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQ 890
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 135/306 (44%), Gaps = 13/306 (4%)
Query: 134 YGALLNCYVRQRQTDKALSH-FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+ L+N +VR + ++A + + KM G T++ ++ K G + +++ +M
Sbjct: 349 FNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDM 408
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
AK P+ +Y I I+ + + LE +ILREM ++ L+ Y + K
Sbjct: 409 DAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTK-GFSLNTVGYNALISALCKHGK 467
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD---LEKTACKRYINRD 309
I +A D+ + + + D +N LI + + L L+ LE +
Sbjct: 468 IHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIAN---SVT 524
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ T++ A ++ GE +EA K++ + G D N +I C G V+ + E+++
Sbjct: 525 FNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMI 584
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
KG + + ++ G+ AGK + M+ + +G+ PD S+++ L
Sbjct: 585 RKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIH-----RGFSPDIVTYNSLINGLCK 639
Query: 430 EGSVQD 435
G +Q+
Sbjct: 640 RGRIQE 645
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 148/387 (38%), Gaps = 79/387 (20%)
Query: 51 DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGR 110
D + NG V ++ L K+ F ALE+ + M+ KG
Sbjct: 371 DKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGC----------------- 413
Query: 111 VHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYN 170
+ TY L++ + ++ Q ++A R+M G +L+T+ YN
Sbjct: 414 -----------------KPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYN 456
Query: 171 DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
++ K G+ + D+ EM +K PD F++ I ++E + R+M +
Sbjct: 457 ALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLE 516
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
++ + T+ + H +++ I +A ++ R D I YN LI
Sbjct: 517 -GVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLI----------- 564
Query: 291 VLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
+AL K G E+ + +E G + N +I
Sbjct: 565 ------------------------KALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILIN 600
Query: 351 GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--V 408
G+C G V NA + D++ +G + ++ + G G+ + AL+++ +
Sbjct: 601 GFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQE-------ALNLFEKL 653
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQD 435
+ +G +PD +++ L EG+ D
Sbjct: 654 QAEGIQPDSITYNTLICWLCREGAFDD 680
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 154/373 (41%), Gaps = 23/373 (6%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L++ ++ + D+AL +M MG T+N ++ + + + + ++ M
Sbjct: 248 YQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMI 307
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
K P++ +Y ++ ++ + +L ++ P++V ++T + F L
Sbjct: 308 LKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG-PNVV-HFNTLVNG--FVRNGRLN 363
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYIT 312
+ + V K D ++ L++ G L L D++ CK +N Y
Sbjct: 364 EATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLN-TYTI 422
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ K G+ EEA +L+E G S +T NA+I C +G + A + ++ KG
Sbjct: 423 LIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKG 482
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG--KGWKPDPKVITSILSKLGDE 430
++ + G + M+ AL++Y + +G + +++
Sbjct: 483 CKPDIFTFNSLIFGLCRVDE-------MEDALALYRDMVLEGVIANSVTFNTLIHAFLRR 535
Query: 431 GSVQDVEAFVA-ALRTVIPMNRQMYHAFIKANIRNG---KGVDELLDSMKADGIDEDEET 486
G +Q+ V L P++ Y+ IKA + G KG+ L + M G+ T
Sbjct: 536 GEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLG-LFEEMIRKGLTPSIIT 594
Query: 487 KEILV---CTMEK 496
IL+ CT K
Sbjct: 595 CNILINGFCTAGK 607
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 49/90 (54%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+N ++ + +AL+ F K++ GI ++TYN ++C + G ++ +L
Sbjct: 629 TYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRG 688
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEI 222
P++ ++ I + ++G +S+ EG I
Sbjct: 689 VENGFVPNDVTWNILVYNFGKQSNSEGQTI 718
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 130/323 (40%), Gaps = 31/323 (9%)
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI-ILREMESQPHIVLDWSTY 240
++ + +L +MK + I S I I Y R+ L G +L +M+ + +Y
Sbjct: 120 FKVIDRLLLQMKEEGIVFRE-SLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSY 178
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN-KSEVLRLWDLEK 299
+ N AS+V + + + ++ + + L L D+ K
Sbjct: 179 NVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTK 238
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
C + Y T+++AL K +EA K+L+E L G D N VI G+C V
Sbjct: 239 HGCVPN-SMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVL 297
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAG--KTERGFQCMKAALSVYVEGKGWKPDP 417
+++ ++ KG TPN + GY G KT R +A LS P P
Sbjct: 298 EGAKLVDRMILKG--FTPND---MTYGYLMHGLCKTCR-IDEAQALLSKV-------PGP 344
Query: 418 KVI--TSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG---KGVD--- 469
V+ ++++ G + + AFV + N + F + + NG KG+
Sbjct: 345 NVVHFNTLVNGFVRNGRLNEATAFV---YDKMINNGYVPDVFTFSTLVNGLCKKGLFGSA 401
Query: 470 -ELLDSMKADGIDEDEETKEILV 491
EL++ M A G + T IL+
Sbjct: 402 LELVNDMDAKGCKPNLNTYTILI 424
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 149/386 (38%), Gaps = 70/386 (18%)
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK---------------------- 193
+MKE GI + IM Y + G + +L +MK
Sbjct: 129 QMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVG 188
Query: 194 -----AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
A N+F D S + N Y ++ + ++ E+++ ++ D + + + I
Sbjct: 189 NCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMV-NEVDNACLLLRDMTKHGCVPNSMI 247
Query: 249 KANLIDKAS--DVLKKAEERLEQKDGIG-------YNFLISLYASLGNKSEVLRLWDLEK 299
LID S D + +A + LE+ +G +N +I + L E +L D +
Sbjct: 248 YQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVD--R 305
Query: 300 TACKRYINRD--YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP-------NAVII 350
K + D Y ++ L K +EA+ +L +++P N ++
Sbjct: 306 MILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL-----------SKVPGPNVVHFNTLVN 354
Query: 351 GYCNNGLVQNAEAILED-LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
G+ NG + A A + D ++ G +++ + G G + + ++
Sbjct: 355 GFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVND-----MD 409
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGV 468
KG KP+ T ++ +G +++ + + T +N Y+A I A ++GK +
Sbjct: 410 AKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGK-I 468
Query: 469 DELLD---SMKADGIDEDEETKEILV 491
E LD M + G D T L+
Sbjct: 469 HEALDMFGEMSSKGCKPDIFTFNSLI 494
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 181/401 (45%), Gaps = 33/401 (8%)
Query: 101 HAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEM 160
H+V L L+ + S E Y +++ + +L+ Y R + ++A++ F KM++
Sbjct: 190 HSVALRLLDEI----SVEEYSLDVR-------AWTTILHAYSRIGKYERAITMFEKMRKT 238
Query: 161 GIALSTLTYNDIMCLYSKTGQ-YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
G++ + +TYN ++ +Y K G+ + K+ +L EM++ + D F+ I++ G L+
Sbjct: 239 GLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDE 298
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
++S+ ++ + TY S + KA + +A +LK+ E+ D + YN L+
Sbjct: 299 ARKFFARLKSEGYVAGTF-TYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELV 357
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELS 336
+ Y G E D T ++ I + Y T++ A K G+ ++A ++ + S
Sbjct: 358 AAYVRAGFHEEGADFID---TMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES 414
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK---T 393
G + NA++ ++ +L D+ G A +W + A + G
Sbjct: 415 GCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYV 474
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQ 452
R F+ MK+ G++P+ +++ G GS D V+ + ++
Sbjct: 475 NRVFREMKSC--------GFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVT 526
Query: 453 MYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
Y+A + A R G + + ++ MK+ G +E + +++
Sbjct: 527 TYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLML 567
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 13/261 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ALLN R+ + A S MK G + +Y+ ++ Y+K G + + E+
Sbjct: 527 TYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEI 586
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+IFP R + + R L GME +E +P +VL + S + K
Sbjct: 587 YNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVL----FNSMLSIFAK 642
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG---NKSEVLRLWDLEKTACKRYI 306
+ D+A ++L+ E Q D + YN L+ +YA G E+L+ ++K+ K +
Sbjct: 643 NKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILK--GIQKSGGKPDL 700
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y T+++ + G +EA + L E +SG N + GY G+ E ++
Sbjct: 701 -VSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVIS 759
Query: 367 DLVEKGKATTPNSWAVVAAGY 387
+++ ++ +V GY
Sbjct: 760 YMIQHDCRPNELTYKIVVDGY 780
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 15/271 (5%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E T+ AL+ Y R + + +M + G TYN ++ ++ G +E
Sbjct: 487 EPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAES 546
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
V+ +MK+K P+ SY + +N Y + G+E I E+ + HI W +
Sbjct: 547 VILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNG-HIFPSWILLRT----L 601
Query: 248 IKANLIDKASDVLKKAEERL----EQKDGIGYNFLISLYAS---LGNKSEVLRLWDLEKT 300
+ AN +A +++A + + D + +N ++S++A E+LRL + ++
Sbjct: 602 VLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRL--IRES 659
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
+ + Y ++++ + GE + E++LK + SG D N VI G+C GL+Q
Sbjct: 660 GLQPDL-VTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQE 718
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
A L ++ G ++ AGY G
Sbjct: 719 AIRTLSEMTISGIRPCIVTYNTFVAGYSGKG 749
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 127/279 (45%), Gaps = 7/279 (2%)
Query: 117 AESYFSNLKDD---EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A +F+ LK + T+ TY +LL + + +ALS ++M++ +TYN+++
Sbjct: 299 ARKFFARLKSEGYVAGTF-TYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELV 357
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
Y + G +E+ D + M K I P+ +Y IN+YG + R+M+ +
Sbjct: 358 AAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMK-ESGC 416
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
V + TY + K + +++ D+L + + +N ++++ + G V R
Sbjct: 417 VPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNR 476
Query: 294 LWDLEKTACKRYINRD-YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
++ E +C NRD + ++ A + G + K+ +E +G + NA++
Sbjct: 477 VFR-EMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNAL 535
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
G + AE+++ D+ KG S++++ Y G
Sbjct: 536 ARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGG 574
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 167/387 (43%), Gaps = 38/387 (9%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGR-------VHGFLSAE 118
I+ + ++ +A+ + + M + G+ +P + V LD+ G+ + G L E
Sbjct: 215 ILHAYSRIGKYERAITMFEKMRKTGL---SPTLVTYNVMLDVYGKMGRSWNKILGLLD-E 270
Query: 119 SYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
+ L+ DE T T +++ R+ D+A F ++K G T TYN ++ ++ K
Sbjct: 271 MRSNGLEFDEFTCST---VISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGK 327
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL--EGMEIILREMESQPHIVLD 236
G Y + +L EM+ N PD +Y + +Y R+ EG + I + + I+ +
Sbjct: 328 AGIYSEALSILKEMEKNNCPPDLVTYNELVAAY-VRAGFHEEGADFI--DTMIRKGIMPN 384
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE----VL 292
TY + + Y KA DKA ++ +E + YN ++ + LG KS +
Sbjct: 385 AITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGM---LGKKSRLEEMID 441
Query: 293 RLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
L D+ C + + TML G H+ +V +E + G + NA+I Y
Sbjct: 442 MLCDMRSNGCAPN-SVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAY 500
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--G 410
G + + E++++ G ++ + G E AA SV ++
Sbjct: 501 GRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWE-------AAESVILDMKS 553
Query: 411 KGWKPDPKVITSILSKLGDEGSVQDVE 437
KG+KP+ + +L+ G+ + +E
Sbjct: 554 KGFKPNETSYSLMLNCYAKGGNGRGIE 580
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 149/317 (47%), Gaps = 18/317 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y A+++ + ++ + A F++++ GI + +TY ++ + ++ +L++M
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 194 AKNIFPDNFSYRICINSYGARSD-LEGMEII--LREMESQPHIVLDWSTYASAAHFYIKA 250
K I P+ +Y ++++ LE E+ + M P IV TY+S +
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV----TYSSLVNGLCLH 308
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD- 309
+ ID+A+ + + D + YN LI+ + + ++L+ + +R + +
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF---REMSQRGLVSNT 365
Query: 310 --YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+++ + G+ ++A++ + + G S D N ++ G C+NG ++ A I ED
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ ++ ++ V G GK E + + +LS+ KG KPD T+++S L
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWS-LFCSLSL----KGLKPDIVTYTTMMSGL 480
Query: 428 GDEGSVQDVEAFVAALR 444
+G + +VEA ++
Sbjct: 481 CTKGLLHEVEALYTKMK 497
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 145/334 (43%), Gaps = 22/334 (6%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDL 107
+D V+ G K + II L K KR + A + + RKGI P + ++
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI---RPNVVTYTALVNG 234
Query: 108 IGRVHGFLSAESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
+ + A S++ + T TY ALL+ +V+ + +A F +M M I
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 166 TLTYNDI---MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+TY+ + +CL+ + + ++ D+ M +K D SY IN + +E
Sbjct: 295 IVTYSSLVNGLCLHDRIDEANQMFDL---MVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+ REM SQ +V + TY + + +A +DKA + + + D YN L+
Sbjct: 352 LFREM-SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 283 ASLGNKSEVLRLW-DLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGN 338
G + L ++ D++K R ++ D Y T++ + K G+ EEA + L G
Sbjct: 411 CDNGELEKALVIFEDMQK----REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
D ++ G C GL+ EA+ + ++G
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 116/271 (42%), Gaps = 13/271 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ LL+ V+ ++ D +S +KM+ +GI T+N ++ + Q +L +M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 194 AKNIFPDNFSYRICINSYGAR---SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
PD + +N + R SD + + E+ +P IV Y + K
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV----AYNAIIDSLCKT 203
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
++ A D K+ E + + + + Y L++ + S+ RL K+ I +
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL---SDMIKKKITPNV 260
Query: 311 IT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
IT +L+A +K G+ EA+++ +E D ++++ G C + + A + +
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDL 320
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+V KG S+ + G+ A + E G +
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 189/456 (41%), Gaps = 32/456 (7%)
Query: 33 YSIISPLGNPGTR--IEPELDNW------------VKNGNKVRVGELQRIIRDLRKRKRF 78
Y +SP G R IEP D+ K+ + EL ++ L K+F
Sbjct: 92 YHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKF 151
Query: 79 SQALEVSDW-MNRKGI-CVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQ--TY 134
AL DW M +K + A+ + ++G+ SA + F+ L++D + +Y
Sbjct: 152 DLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSY 211
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ-YEKVPDVLTEMK 193
+L++ + + +A++ F+KM+E G + +TYN I+ ++ K G + K+ ++ +MK
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ I PD ++Y I S + + EM++ D TY + Y K++
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA-GFSYDKVTYNALLDVYGKSHRP 330
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
+A VL + + YN LIS YA G E + L + + Y T+
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
L + G+ E A + +E +G + NA I Y N G I +++ G
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 374 ATTPNSWAVVAAGYFDAG---KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+ +W + A + G + F+ MK A G+ P+ + +++S
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA--------GFVPERETFNTLISAYSRC 502
Query: 431 GSV-QDVEAFVAALRTVIPMNRQMYHAFIKANIRNG 465
GS Q + + L + + Y+ + A R G
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 158/381 (41%), Gaps = 13/381 (3%)
Query: 23 YTNRINKTTLYSIISPLGNPG--TRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQ 80
Y + ++ + + IIS LG G + + ++G + V +I R+ +
Sbjct: 167 YQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYRE 226
Query: 81 ALEVSDWMNRKGICVFAPCDHAVQLDLIGRV-HGFLSAESYFSNLKDD--EKTYQTYGAL 137
A+ V M G C + V L++ G++ + S +K D TY L
Sbjct: 227 AVNVFKKMEEDG-CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTL 285
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI 197
+ C R +A F +MK G + +TYN ++ +Y K+ + ++ VL EM
Sbjct: 286 ITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF 345
Query: 198 FPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKAS 257
P +Y I++Y AR + + L+ ++ D TY + + +A ++ A
Sbjct: 346 SPSIVTYNSLISAY-ARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 258 DVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI---TML 314
+ ++ + + +N I +Y + G +E+++++D E C ++ D + T+L
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD-EINVCG--LSPDIVTWNTLL 461
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
+ G E V KE + +G + N +I Y G + A + +++ G
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT 521
Query: 375 TTPNSWAVVAAGYFDAGKTER 395
+++ V A G E+
Sbjct: 522 PDLSTYNTVLAALARGGMWEQ 542
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/401 (19%), Positives = 163/401 (40%), Gaps = 23/401 (5%)
Query: 57 GNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLS 116
G K + I+ R +F++ +++ D +N +C +P V + + V G
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN---VCGLSP--DIVTWNTLLAVFGQNG 468
Query: 117 AESYFSNLKDDEKTY------QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYN 170
+S S + + K +T+ L++ Y R ++A++ +R+M + G+ TYN
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 171 DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES- 229
++ ++ G +E+ VL EM+ P+ +Y +++Y ++ M + E+ S
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSG 588
Query: 230 --QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN 287
+P VL + + K +L+ +A + +ER D N ++S+Y
Sbjct: 589 VIEPRAVLLKTLVLVCS----KCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQM 644
Query: 288 KSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
++ + D K Y +++ + + ++E++L+E G D N
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
VI YC N +++A I ++ G ++ Y E ++ Y
Sbjct: 705 VIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR-----Y 759
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
+ G +P+ SI+ + + FV LR + P
Sbjct: 760 MIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDP 800
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 109/249 (43%), Gaps = 9/249 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ALL+ Y + + +A+ +M G + S +TYN ++ Y++ G ++ ++ +M
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
K PD F+Y ++ + +E I EM + +P+I T+ + Y
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC----TFNAFIKMYGN 431
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ + + D + +N L++++ G SEV ++ K A
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ T++ A + G E+A V + +G + D N V+ G+ + +E +L ++
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM- 550
Query: 370 EKGKATTPN 378
E G+ PN
Sbjct: 551 EDGRC-KPN 558
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 1/209 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N Y ++ KAL F +M + G+ + +TY ++ ++S+ GQ ++ +
Sbjct: 291 TYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVA 350
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K I PD Y INS+ D+E I+ EME + I D TY + +
Sbjct: 351 VKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKK-RIPPDDMTYNTLMRGFCLLGR 409
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+D+A ++ + +R Q D + YN LIS Y+ G+ + LR+ D Y
Sbjct: 410 LDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNA 469
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+++ L K+ + ++AE ++KE G + D
Sbjct: 470 LIQGLCKIRQGDDAENLMKEMVAKGITPD 498
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 149/343 (43%), Gaps = 23/343 (6%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A + F + + + L T T+N ++ TG+ + ++L +M P+ +Y I
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIA 155
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
+ AR ++ ++REM + I D TYA+ + K I + D +K +E L +
Sbjct: 156 GFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCK---IGRMEDAVKVFDEMLTK 212
Query: 270 KD----GIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHE 324
+ + YN LI Y +G L+ D+ + + Y ++ AL
Sbjct: 213 GEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVA-TYNLLMHALFMDARAS 271
Query: 325 EAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
+A VL+E + +G S D N +I GYC G + A + E++ +KG T ++ +
Sbjct: 272 DAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLI 331
Query: 385 AGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL- 443
+ G+ + + A+ KG +PD + ++++ G ++ +A +
Sbjct: 332 YVFSRKGQVQETDRLFNVAVK-----KGIRPDVVMYNALINSHCTGGDMERAYEIMAEME 386
Query: 444 RTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDED 483
+ IP + Y+ ++ G+ +DE L+D M GI D
Sbjct: 387 KKRIPPDDMTYNTLMRGFCLLGR-LDEARTLIDEMTKRGIQPD 428
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 165/458 (36%), Gaps = 100/458 (21%)
Query: 50 LDNWVKNGNKVRVGELQR------------IIRDLRKRKRFSQALEVSDWMNRKGICVFA 97
L + G VR EL R +I R R ALEV M +G
Sbjct: 123 LRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPD 182
Query: 98 PCDHAVQLD---LIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHF 154
+A + IGR+ + + + Y AL+ Y + D AL +
Sbjct: 183 KYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYR 242
Query: 155 RKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR 214
M + GIA++ TYN +M + VL EM+ PD F+Y I IN Y
Sbjct: 243 EDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCK- 301
Query: 215 SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
EG E KA +V ++ ++ + +
Sbjct: 302 ---EGNE--------------------------------KKALEVFEEMSQKGVRATAVT 326
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKL----GEHEEAEKVL 330
Y LI +++ G E RL+++ A K+ I D + M AL+ G+ E A +++
Sbjct: 327 YTSLIYVFSRKGQVQETDRLFNV---AVKKGIRPD-VVMYNALINSHCTGGDMERAYEIM 382
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
E E D N ++ G+C G + A +++++
Sbjct: 383 AEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEM---------------------- 420
Query: 391 GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMN 450
T+RG Q + + + G K D K + ++ D+G F L T
Sbjct: 421 --TKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKG-------FNPTLMT----- 466
Query: 451 RQMYHAFIKA--NIRNGKGVDELLDSMKADGIDEDEET 486
Y+A I+ IR G + L+ M A GI D+ T
Sbjct: 467 ---YNALIQGLCKIRQGDDAENLMKEMVAKGITPDDST 501
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 170/421 (40%), Gaps = 29/421 (6%)
Query: 28 NKTTLYSIISPLGNPGTRIEPE--LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVS 85
N TL SII G + E L+ + G + G II L RF AL
Sbjct: 452 NSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFL 511
Query: 86 DWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSN-----LKDDEKTYQ----TYGA 136
M + + P D L+ + G L E S+ + EK + T A
Sbjct: 512 REMLLRNM---RPND-----GLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNA 563
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L++ + +A+ +KM E G L +TYN ++ K G+ E+ + EM +
Sbjct: 564 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 623
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
I PD F+Y + I+ L+ + E +S+ +V + TY Y KA+ I++
Sbjct: 624 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR-DLVPNVYTYGVMIDGYCKADKIEEG 682
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
+ + + + + + YN LI Y GN E +L D ++ Y +++
Sbjct: 683 EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 742
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
+ +G E+A+ ++ E G + A+I GYC G + +L+++
Sbjct: 743 MCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPN 802
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQ 434
++ V+ GY +G MK A + E GKG PD + + EG ++
Sbjct: 803 KITYTVMIDGYSKSGD-------MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 855
Query: 435 D 435
+
Sbjct: 856 E 856
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 162/391 (41%), Gaps = 20/391 (5%)
Query: 113 GFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYN 170
GF +A F L + T +T LL+ V+ + +K+ F M++ G++ ++
Sbjct: 259 GFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFS 317
Query: 171 DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
+ + K G+ E + +M+ + P+ +Y I+ +L+ +E +
Sbjct: 318 TAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDE-AFRFKEKMVK 376
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
+ TY+ + +K ++A+ VLK+ E+ + + YN LI Y +GN +
Sbjct: 377 DGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGD 436
Query: 291 VLRLWDLEKTACKRYINRDYITM---LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
LR+ + IN + +T+ ++ K+G+ E+AE +L+E G S +
Sbjct: 437 ALRI---RGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 493
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
+I C N ++A L +++ + + G GK + L
Sbjct: 494 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLE-- 551
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGK 466
KG+ + +++ L G++Q+ V L +++ Y+ I + GK
Sbjct: 552 ---KGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGK 608
Query: 467 GVDE---LLDSMKADGIDEDEETKEILVCTM 494
V+E L M GI+ D T +L+ M
Sbjct: 609 -VEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 638
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 148/367 (40%), Gaps = 24/367 (6%)
Query: 111 VHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL-TY 169
V GF+S D K +G N R + A++ ++ E G+A++ +
Sbjct: 191 VSGFVSPARLLLIRLIDRKLPVLFGDPKN---RHIEIASAMADLNEVGESGVAVAAVDLL 247
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
+ C + + V + K +FP + ++S ++LE + M
Sbjct: 248 IHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ 307
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ D +++A + + K ++ A + E+ + + YN LI GN
Sbjct: 308 G--VSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 365
Query: 290 EVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
E R ++ K +N IT ++ LMKL + EA VLKE G + + + N
Sbjct: 366 EAFRF---KEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYN 422
Query: 347 AVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV--VAAGYFDAGKTERGFQCMKAAL 404
+I GYC G + +A I D+V KG PNS + + G+ G+ E+ ++ L
Sbjct: 423 TLIDGYCKMGNLGDALRIRGDMVSKG--INPNSVTLNSIIQGFCKIGQMEQAECILEEML 480
Query: 405 SVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV--AALRTVIPMNRQMYHAFIKANI 462
S +G+ +P T+I+ L + F+ LR + P N + +
Sbjct: 481 S-----RGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRP-NDGLLTTLVGGLC 534
Query: 463 RNGKGVD 469
+ GK D
Sbjct: 535 KEGKHSD 541
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K T TY +L++ + + A +M++ G+ + + Y ++ Y K GQ +K
Sbjct: 727 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 786
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
V +VL EM + +I P+ +Y + I+ Y D++ +L EM + IV D TY
Sbjct: 787 VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK-GIVPDTVTYNVLT 845
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYN---FLI 279
+ + K I+ E +L +DG+G+N FLI
Sbjct: 846 NGFCKEGKIE---------EGKLLAEDGVGFNSPLFLI 874
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 191/455 (41%), Gaps = 63/455 (13%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L +K G + + +I L K F+QA+E+ D M KG C + ++ +
Sbjct: 151 LAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKG-CQPDVYTYNTIINGLC 209
Query: 110 RVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
++ +A +++ + TY L++ R R ++AL F MK GI+
Sbjct: 210 KIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIF 269
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY---GARSDLEGMEIIL 224
TY ++ K ++++ +L EM + NI PD ++ + ++++ G S+ G+ +
Sbjct: 270 TYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTM 329
Query: 225 REMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
EM +P++V TY+S + Y + +A + + + + YN LI+ Y
Sbjct: 330 TEMGVEPNVV----TYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCK 385
Query: 285 LGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
E ++L++ N Y T++ +LG+ EA+ + + +GN D
Sbjct: 386 AKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFT 445
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
+ ++ G+C G + GK R F+ M+
Sbjct: 446 YSILLDGFCKQGYL--------------------------------GKAFRLFRAMQ--- 470
Query: 405 SVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-----EAFVAALRTVIPMNRQMYHAFIK 459
S Y+ KP+ + T ++ + G+ +D E FV L+ + Q+Y I
Sbjct: 471 STYL-----KPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHV----QLYTTIIN 521
Query: 460 ANIRNGKGVDELLDS---MKADGIDEDEETKEILV 491
+ G +DE L++ M+ADG DE + +++
Sbjct: 522 GLCKEGL-LDEALEAFRNMEADGCPPDEISYNVII 555
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 124/327 (37%), Gaps = 51/327 (15%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGF--------LSAES 119
+I L + + ++AL++ +M KGI +P D LI + F L E
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGI---SP-DIFTYTSLIQGLCKFSRWKEASALLNEM 294
Query: 120 YFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
N+ D T+ L++ + ++ + +AL + M EMG+ + +TY+ +M YS
Sbjct: 295 TSLNIMPD---IVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLW 351
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
+ + M K P+ FSY I IN Y ++ + EM Q + + +
Sbjct: 352 TDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQ-GLTPNNVS 410
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--- 296
Y + H + + + +A D+ + D Y+ L+ + G + RL+
Sbjct: 411 YNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQ 470
Query: 297 -------------LEKTACKRYINRD-------------------YITMLEALMKLGEHE 324
L CK ++D Y T++ L K G +
Sbjct: 471 STYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLD 530
Query: 325 EAEKVLKEWELSGNSYDTRIPNAVIIG 351
EA + + E G D N +I G
Sbjct: 531 EALEAFRNMEADGCPPDEISYNVIIRG 557
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 181/401 (45%), Gaps = 33/401 (8%)
Query: 101 HAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEM 160
H+V L L+ + S E Y +++ + +L+ Y R + ++A++ F KM++
Sbjct: 190 HSVALRLLDEI----SVEEYSLDVR-------AWTTILHAYSRIGKYERAITMFEKMRKT 238
Query: 161 GIALSTLTYNDIMCLYSKTGQ-YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
G++ + +TYN ++ +Y K G+ + K+ +L EM++ + D F+ I++ G L+
Sbjct: 239 GLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDE 298
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
++S+ ++ + TY S + KA + +A +LK+ E+ D + YN L+
Sbjct: 299 ARKFFARLKSEGYVAGTF-TYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELV 357
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELS 336
+ Y G E D T ++ I + Y T++ A K G+ ++A ++ + S
Sbjct: 358 AAYVRAGFHEEGADFID---TMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES 414
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK---T 393
G + NA++ ++ +L D+ G A +W + A + G
Sbjct: 415 GCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYV 474
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQ 452
R F+ MK+ G++P+ +++ G GS D V+ + ++
Sbjct: 475 NRVFREMKSC--------GFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVT 526
Query: 453 MYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
Y+A + A R G + + ++ MK+ G +E + +++
Sbjct: 527 TYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLML 567
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 13/261 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ALLN R+ + A S MK G + +Y+ ++ Y+K G + + E+
Sbjct: 527 TYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEI 586
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+IFP R + + R L GME +E +P +VL + S + K
Sbjct: 587 YNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVL----FNSMLSIFAK 642
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG---NKSEVLRLWDLEKTACKRYI 306
+ D+A ++L+ E Q D + YN L+ +YA G E+L+ ++K+ K +
Sbjct: 643 NKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILK--GIQKSGGKPDL 700
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y T+++ + G +EA + L E +SG N + GY G+ E ++
Sbjct: 701 -VSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVIS 759
Query: 367 DLVEKGKATTPNSWAVVAAGY 387
+++ ++ +V GY
Sbjct: 760 YMIQHDCRPNELTYKIVVDGY 780
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 15/271 (5%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E T+ AL+ Y R + + +M + G TYN ++ ++ G +E
Sbjct: 487 EPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAES 546
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
V+ +MK+K P+ SY + +N Y + G+E I E+ + HI W +
Sbjct: 547 VILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNG-HIFPSWILLRT----L 601
Query: 248 IKANLIDKASDVLKKAEERL----EQKDGIGYNFLISLYAS---LGNKSEVLRLWDLEKT 300
+ AN +A +++A + + D + +N ++S++A E+LRL + ++
Sbjct: 602 VLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRL--IRES 659
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
+ + Y ++++ + GE + E++LK + SG D N VI G+C GL+Q
Sbjct: 660 GLQPDL-VTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQE 718
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
A L ++ G ++ AGY G
Sbjct: 719 AIRTLSEMTISGIRPCIVTYNTFVAGYSGKG 749
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 127/279 (45%), Gaps = 7/279 (2%)
Query: 117 AESYFSNLKDD---EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A +F+ LK + T+ TY +LL + + +ALS ++M++ +TYN+++
Sbjct: 299 ARKFFARLKSEGYVAGTF-TYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELV 357
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
Y + G +E+ D + M K I P+ +Y IN+YG + R+M+ +
Sbjct: 358 AAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMK-ESGC 416
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
V + TY + K + +++ D+L + + +N ++++ + G V R
Sbjct: 417 VPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNR 476
Query: 294 LWDLEKTACKRYINRD-YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
++ E +C NRD + ++ A + G + K+ +E +G + NA++
Sbjct: 477 VFR-EMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNAL 535
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
G + AE+++ D+ KG S++++ Y G
Sbjct: 536 ARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGG 574
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 167/387 (43%), Gaps = 38/387 (9%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGR-------VHGFLSAE 118
I+ + ++ +A+ + + M + G+ +P + V LD+ G+ + G L E
Sbjct: 215 ILHAYSRIGKYERAITMFEKMRKTGL---SPTLVTYNVMLDVYGKMGRSWNKILGLLD-E 270
Query: 119 SYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
+ L+ DE T T +++ R+ D+A F ++K G T TYN ++ ++ K
Sbjct: 271 MRSNGLEFDEFTCST---VISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGK 327
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL--EGMEIILREMESQPHIVLD 236
G Y + +L EM+ N PD +Y + +Y R+ EG + I + + I+ +
Sbjct: 328 AGIYSEALSILKEMEKNNCPPDLVTYNELVAAY-VRAGFHEEGADFI--DTMIRKGIMPN 384
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE----VL 292
TY + + Y KA DKA ++ +E + YN ++ + LG KS +
Sbjct: 385 AITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGM---LGKKSRLEEMID 441
Query: 293 RLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
L D+ C + + TML G H+ +V +E + G + NA+I Y
Sbjct: 442 MLCDMRSNGCAPN-SVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAY 500
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--G 410
G + + E++++ G ++ + G E AA SV ++
Sbjct: 501 GRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWE-------AAESVILDMKS 553
Query: 411 KGWKPDPKVITSILSKLGDEGSVQDVE 437
KG+KP+ + +L+ G+ + +E
Sbjct: 554 KGFKPNETSYSLMLNCYAKGGNGRGIE 580
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 162/369 (43%), Gaps = 30/369 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ AL++ + ++ D AL +M++ GI S + YN ++ Y K G+ + +++ EM
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+AK + PD +Y I+ Y +L+ + ++M + ++ D TY+S +
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKK-GVLPDAITYSSLIRGLCEEKR 306
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
++ A ++ + + Q D Y LI + GN + L L D + K + Y
Sbjct: 307 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT--Y 364
Query: 311 ITMLEALMKLGEHEEAEKVL---------------KEWELSGNSYDTRIPNAVIIGYCNN 355
++ L K +EA ++L L + + + A++ G+C
Sbjct: 365 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMK 424
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
GL++ A+ + + ++++ + ++++ G+ G + K L G+ P
Sbjct: 425 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLR-----SGFSP 479
Query: 416 DPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM-NRQMYHAFIKANIRNGKGVDELLD- 473
+ S++ L +EG V + + + L T P+ + + A I N + G VD L+D
Sbjct: 480 NSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGN-VDALIDV 538
Query: 474 --SMKADGI 480
M DG+
Sbjct: 539 LCGMARDGL 547
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 148/342 (43%), Gaps = 16/342 (4%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
M G+A + TYN ++ G+ E+ V+ +M+ P+ +Y + ++ +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 217 LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
L+G E ++ M + + + T+ S + KA ++ A V + D + YN
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEW 333
L+S Y +G E L ++ E T +R + D +T ++ A K G E+A ++ +
Sbjct: 121 TLLSGYCKVGCLHESLAVFS-EMT--QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 177
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
G + A+I G+C G + +A +E++ + G + + + GY G+
Sbjct: 178 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 237
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNR 451
+ + ++ +E K KPD ++I+S G++ + + V+P +
Sbjct: 238 DLARELIRE-----MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP-DA 291
Query: 452 QMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
Y + I+ + D EL ++M G+ DE T L+
Sbjct: 292 ITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLI 333
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 164/383 (42%), Gaps = 20/383 (5%)
Query: 53 WVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVH 112
V++G V ++R L R R +A+ V M G C + + R
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAG-CAPNAVTYNTLVAAFCRAG 59
Query: 113 GFLSAESYFSNLKDD---EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
AE S ++++ + T+ +++N + + + A F +M G+A ++Y
Sbjct: 60 ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 119
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ Y K G + V +EM + + PD ++ I++ +LE ++ +M
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN-- 287
+ + ++ T+ + + K +D A +++ + Q + YN LI+ Y LG
Sbjct: 180 R-GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238
Query: 288 -KSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
E++R ++E K + Y T++ K+G + A ++ ++ G D +
Sbjct: 239 LARELIR--EMEAKRVKPDV-VTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYS 295
Query: 347 AVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSV 406
++I G C + +A + E++++ G ++ + G+ G E+ ALS+
Sbjct: 296 SLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK-------ALSL 348
Query: 407 YVE--GKGWKPDPKVITSILSKL 427
+ E KG PD + +++ L
Sbjct: 349 HDEMIRKGVLPDVVTYSVLINGL 371
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 161/367 (43%), Gaps = 22/367 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ + +TDKA +M + G+ T+T+N IM K G++E+ +L M
Sbjct: 12 TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 71
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+N P +Y I+ + +++ + ++ E S V D TY+ A K
Sbjct: 72 AERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSS-GFVPDVVTYSILADGLCKRGR 130
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
ID+A +++K+ + + YN LI L S+ + ++L +T D +T
Sbjct: 131 IDEAFELVKEMSGNGCTPNLVTYNTLID---GLCKASKTEKAYELLETLVSSGFVPDVVT 187
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+++ L K G ++A K+++ G + A++ G C G V A I +++V
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
K ++ + GY + +T+ + V+G P V +++
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQK--------VVDGIRGTPYIDVYNALMDGYCK 299
Query: 430 EGSVQDVEAFV--AALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDE 484
EG + ++ A R +P N + Y+ + ++GK VDE L+SM + G D
Sbjct: 300 EGRLDEIPNVFEDMACRGCVP-NIKTYNIVMDGLCKHGK-VDEAFPFLESMHSAGCVPDV 357
Query: 485 ETKEILV 491
+ I++
Sbjct: 358 VSYNIII 364
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 15/306 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L + ++ + D+A ++M G + +TYN ++ K + EK ++L +
Sbjct: 117 TYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETL 176
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+ PD +Y I ++ L+ ++ M P ++ TY + +
Sbjct: 177 VSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVI----TYTALMEGLCR 232
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+D+A + K+ + D + Y L++ Y E ++ D + YI+
Sbjct: 233 TGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT--PYIDV- 289
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ K G +E V ++ G + + N V+ G C +G V A LE +
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G S+ ++ G F A K + Q + + G PD +++++
Sbjct: 350 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA-----GIPPDAVTYNTLMAQFCK 404
Query: 430 EGSVQD 435
E D
Sbjct: 405 EERFDD 410
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 6/238 (2%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y AL++ Y ++ + D+ + F M G + TYN +M K G+ ++ L M
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ PD SY I I+ S + +L +M Q I D TY + + K
Sbjct: 350 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQM-IQAGIPPDAVTYNTLMAQFCKEERF 408
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYAS---LGNKSEVLRLWDLEKTACKRYINRDY 310
D A +LK + D + YN LIS + LG+ E++ ++ + C Y
Sbjct: 409 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMH--EMLRNGCVVSACTTY 466
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
T+++ L K G ++A ++ G +T N I C G + A ++L ++
Sbjct: 467 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 524
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/270 (18%), Positives = 107/270 (39%), Gaps = 10/270 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +++ + + +A +M + GI +TYN +M + K +++ +L M
Sbjct: 359 SYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNM 418
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PDN +Y I+ + L ++ EM +V +TY + K
Sbjct: 419 IKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGC 478
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
+ +A ++ + + + YN I G E L T RD
Sbjct: 479 LKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL------RDEVS 532
Query: 310 YITMLEALMKLGEHEEAEKVLKEW-ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y T++ L K + + A K+ +E + G + N +I + + A +LE +
Sbjct: 533 YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELM 592
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
V++G + + ++ +V K ++ ++
Sbjct: 593 VQRGCSPSVITYNMVITCLCKLDKVDKAWE 622
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 108/295 (36%), Gaps = 42/295 (14%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L N +K G +I L + R A E+ M R G CV + C
Sbjct: 415 LKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG-CVVSAC---------- 463
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
TY +++ ++ +AL M G+ +T+TY
Sbjct: 464 ----------------------TTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 501
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N + K G+ ++ +L+EM + D SY I L+ + REM +
Sbjct: 502 NIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVA 558
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + T+ + K +D+A +L+ +R I YN +I+ L
Sbjct: 559 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKL---D 615
Query: 290 EVLRLWDLEKTACKRYI---NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+V + W+L R I + Y ++ L G +EA +VL+E S D
Sbjct: 616 KVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 670
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 156/342 (45%), Gaps = 14/342 (4%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG-RVHGFLSAESYFSNLKD 126
+I L + +RF + + + + M R+G A + V LDL G R + +S F +KD
Sbjct: 80 LISILSRARRFDEGITLFETMQREGQRGNA-VTYNVMLDLYGKRGDSWDRIQSLFQEMKD 138
Query: 127 DEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
E + TY ++ ++ +AL F++MKE G + +TYN ++ +Y K G +++
Sbjct: 139 LEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKE 198
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
++L EM+A I P+ +Y I +Y AR+ L L++ + D TY +
Sbjct: 199 ASELLVEMEAAGISPNIVTYNELIAAY-ARAGLCDEAAALKKSLLSKGLCPDEFTYCTLI 257
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
+ +A +KA + + + + + YN LI +Y + ++++++ + ++
Sbjct: 258 SAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQ---EK 314
Query: 305 YINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
D +T +L++ G E V +E + +G N +I Y G V +
Sbjct: 315 NCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYS 374
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAA 403
I + L+ G T ++A + A G+ + QC K +
Sbjct: 375 VDIYKGLLRTGLQPTVPTFAALMASLAREGRWQ---QCEKVS 413
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 176/413 (42%), Gaps = 21/413 (5%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSN 123
EL ++ L ++ ++ +ALEV +W+ + A L ++G +A F +
Sbjct: 4 ELVYFVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFES 63
Query: 124 LKDDEK---TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
LK DE Y +L++ R R+ D+ ++ F M+ G + +TYN ++ LY K G
Sbjct: 64 LKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRG 123
Query: 181 -QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
++++ + EMK I PD+++Y I + S + + +EM+ + + T
Sbjct: 124 DSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMK-EAGCCPNRVT 182
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG--NKSEVLRLWDL 297
Y + Y K + +AS++L + E + + YN LI+ YA G +++ L+ L
Sbjct: 183 YNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLL 242
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
K C Y T++ A + +E+A + E + + + N +I Y
Sbjct: 243 SKGLCPDEFT--YCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEK 300
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG---KTERGFQCMKAALSVYVEGKGWK 414
+ + + + + EK +W + + + G + F+ MK A G+
Sbjct: 301 LDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRA--------GYM 352
Query: 415 PDPKVITSILSKLGDEGSVQ-DVEAFVAALRTVIPMNRQMYHAFIKANIRNGK 466
P ++ G G V V+ + LRT + + A + + R G+
Sbjct: 353 PGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGR 405
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y R+ KA +M+ G A + +TYN ++ Y+K G+ + V +M
Sbjct: 533 TYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDM 592
Query: 193 KAKNIFPDNFSYRICINSYGA 213
A + PDNF++ + SY +
Sbjct: 593 VAARVRPDNFTFNTLVGSYSS 613
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 121/297 (40%), Gaps = 15/297 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+ CY R D ++ ++ + G+ + T+ +M ++ G++++ V EM
Sbjct: 357 TFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEM 416
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIK 249
+ + + I+SY + + E+E QP + T+ A Y K
Sbjct: 417 AEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLA---YCK 473
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ ++A L + + D +N +IS+ A G ++L + + A +
Sbjct: 474 CCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVT 533
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ + G + +AE+V+ E +G + + N ++ Y +G + +A + D+V
Sbjct: 534 YNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMV 593
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSV--YVEGKGWKPDPKVITSIL 424
++ + Y G K ALSV Y+ G +P ++L
Sbjct: 594 AARVRPDNFTFNTLVGSYSSLG-------LYKEALSVIEYMTEHGCQPTQITFKALL 643
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 139/346 (40%), Gaps = 16/346 (4%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I + +R+ +ALE M RK C + + +D+ GR+ F +++
Sbjct: 256 LISAFNRAERYEKALETFTEM-RKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEK 314
Query: 128 EKT--YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
T T+ +LL + + + FR+MK G T+N ++ Y + G +
Sbjct: 315 NCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYS 374
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
D+ + + P ++ + S + E + +EM ++ + L + +A H
Sbjct: 375 VDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEM-AEAGLQLSDACHAGLIH 433
Query: 246 FYIKANLIDKASDVLKKAEERLEQK-DGIGYNFLISLY--ASLGNKSEVL--RLWDLEKT 300
Y + + + + E+ +Q GI + Y + N++++ +L+D +
Sbjct: 434 SYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGHS 493
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
+ N M+ K G E A K+L+E + D N ++ Y G+
Sbjct: 494 PDIKVFN----AMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHK 549
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE---RGFQCMKAA 403
AE ++ ++ GKA ++ + Y G+ + R F M AA
Sbjct: 550 AEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAA 595
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/151 (19%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ + A+++ ++ ++A+ ++++ + +TYN +M +Y + G Y K +V++E
Sbjct: 497 KVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSE 556
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ P+ +Y + SY ++ + +M + + D T+ + Y
Sbjct: 557 MRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVA-ARVRPDNFTFNTLVGSYSSLG 615
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
L +A V++ E Q I + L+ Y
Sbjct: 616 LYKEALSVIEYMTEHGCQPTQITFKALLDGY 646
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 184/450 (40%), Gaps = 55/450 (12%)
Query: 80 QALEVSDWMNRKGI--CVFAPCDHAVQLDLIGRVHGFLSAESYFS-----NLKDDEKTYQ 132
+A E+ D M+ KG+ CVF + ++ + + +L A+ + D TY
Sbjct: 411 EAFELMDSMSGKGLKPCVFT---YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 467
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
L+ C D A F +M G+ ++++ ++ L SK G ++ +M
Sbjct: 468 IL--LVECCRNDNMMD-AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 524
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PDN Y I I + R+ + + +R+ + LD TY + + K +
Sbjct: 525 KNAGLAPDNVIYTILIGGF-CRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM 583
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ +A ++ + ER D + LI+ Y GN ++ + L+++ +R + D +T
Sbjct: 584 LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEM---MIQRNLKPDVVT 640
Query: 313 MLEALMKLGEHEEAEKVLKEWE--LSGNSYDTRIPNAVII-GYCNNGLVQNAEAILEDLV 369
+ + E EKV + W +S Y I ++I GYCN G V A + +++V
Sbjct: 641 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 700
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTER-------------------------GF---QCMK 401
EKG T + + GY AG + GF + M
Sbjct: 701 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMD 760
Query: 402 AALSVY--VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAF 457
A ++ +E G PD IL+ +G +Q+ E + + R V P +R Y +
Sbjct: 761 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNP-DRSTYTSL 819
Query: 458 IKANI--RNGKGVDELLDSMKADGIDEDEE 485
I ++ N K + D M G D++
Sbjct: 820 INGHVTQNNLKEAFRVHDEMLQRGFVPDDK 849
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 5/265 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N Y RQ ++A M G+ TYN I+ KTG+Y + VL EM
Sbjct: 395 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 454
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD +Y I + ++ E I EM SQ +V D ++++ K
Sbjct: 455 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQ-GVVPDLVSFSALIGLLSKNGC 513
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+D+A + + D + Y LI + G SE L++ D LE+ + Y
Sbjct: 514 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVT--Y 571
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T+L L K EA+++ E G D +I GY +G + A + E +++
Sbjct: 572 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQ 631
Query: 371 KGKATTPNSWAVVAAGYFDAGKTER 395
+ ++ + G+ + E+
Sbjct: 632 RNLKPDVVTYNTLIDGFCKGSEMEK 656
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 139/346 (40%), Gaps = 50/346 (14%)
Query: 78 FSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE--KTYQTYG 135
S+AL+V D M +G C + L+ + + A+ F+ + + + T+
Sbjct: 549 MSEALKVRDEMLEQG-CXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFT 607
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
L+N Y + +KA++ F M + + +TYN ++ + K + EKV ++ +M ++
Sbjct: 608 TLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR 667
Query: 196 NIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
I+P++ SY I IN Y G S+ + + E + I+ T + Y +A
Sbjct: 668 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATII----TCNTIVKGYCRAGN 723
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
KA + L + DGI YN T
Sbjct: 724 AVKADEFLSNMLLKGIVPDGITYN-----------------------------------T 748
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ +K + A ++ + E SG D N ++ G+ G +Q AE I+ ++E+G
Sbjct: 749 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 808
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
+++ + G+ + F+ L +G+ PD K
Sbjct: 809 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ-----RGFVPDDK 849
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/350 (18%), Positives = 137/350 (39%), Gaps = 7/350 (2%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++R + ++ + E + KG+CV +++ L+ L+ E Y ++
Sbjct: 294 LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSG 353
Query: 128 -EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
+ T ++N + ++ + S M+E G+ +TYN ++ Y + G E+
Sbjct: 354 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 413
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
+++ M K + P F+Y IN + +L EM + + D +TY
Sbjct: 414 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM-LKIGMSPDTATYNILLVE 472
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
+ + + A + + + D + ++ LI L + G + L+ + K A
Sbjct: 473 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 532
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
N Y ++ + G EA KV E G D N ++ G C ++ A+ +
Sbjct: 533 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFT 592
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
++ E+G ++ + GY G + + + + KPD
Sbjct: 593 EMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQ-----RNLKPD 637
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 118/304 (38%), Gaps = 45/304 (14%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L+ YV+ R+ + FR +K G+ +S N ++ K G + ++ E+
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 350
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ + ++ I IN+ +E + L +ME + + D TY + + Y + L
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME-EKGVFPDVVTYNTLINAYCRQGL- 408
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
L++A E ++ G G + Y ++ N
Sbjct: 409 ------LEEAFELMDSMSGKGLKPCVFTYNAIIN-------------------------- 436
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
L K G++ A+ VL E G S DT N +++ C N + +AE I +++ +G
Sbjct: 437 --GLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGV 494
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEG 431
S++ + G C+ AL + + K G PD + T ++ G
Sbjct: 495 VPDLVSFSALIGLLSKNG-------CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 547
Query: 432 SVQD 435
+ +
Sbjct: 548 VMSE 551
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 80/188 (42%), Gaps = 8/188 (4%)
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++L L+K+G + A ++ +E SG + N +I C N ++N ++ L D+ EK
Sbjct: 328 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 387
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G ++ + Y G E F+ M + + GKG KP +I++ L G
Sbjct: 388 GVFPDVVTYNTLINAYCRQGLLEEAFELMDS-----MSGKGLKPCVFTYNAIINGLCKTG 442
Query: 432 SVQDVEAFV-AALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKE 488
+ + L+ + + Y+ + RN +D + D M + G+ D +
Sbjct: 443 KYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFS 502
Query: 489 ILVCTMEK 496
L+ + K
Sbjct: 503 ALIGLLSK 510
>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
Length = 659
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 155/372 (41%), Gaps = 50/372 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
++ ++ + Q D AL F ++++ G A + ++YN + + G ++ ++L EM
Sbjct: 263 SFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREM 322
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ ++ PD+ SY + ++ ++ + +L EM+ P + D +Y +A H KA
Sbjct: 323 QGLSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGR 382
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT------------ 300
++A+++L +A + Q D + YN ++ G + L L+ + +
Sbjct: 383 WERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNT 442
Query: 301 ---ACKRYIN--------------------RDYITMLEALMKLGEHEEAEKVLKEWELSG 337
AC R + + Y ++A + GE E A ++++E E+ G
Sbjct: 443 AMHACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRG 502
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTER 395
+ A + C G V +LE++ GK PN S+ + GK +R
Sbjct: 503 VPANVHTYTAAMDACCRGGAVDRVLVLLEEM--DGKGVEPNVVSYTIAMDAMNRVGKWDR 560
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYH 455
A L V+ +G + D + LS G G + L ++ +RQ H
Sbjct: 561 A----SAVLEQMVQ-RGLRLDSVSYRTALSTAGRAGDEEGER-----LTKIVHESRQRGH 610
Query: 456 AFIKANIRNGKG 467
A + RNG G
Sbjct: 611 ARQRGE-RNGPG 621
>gi|302780277|ref|XP_002971913.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
gi|300160212|gb|EFJ26830.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
Length = 570
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 176/430 (40%), Gaps = 12/430 (2%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++ L + +++ +V+++M R D+ Q+ +AE+ F+NL
Sbjct: 136 VLFKLLRNEKYKPGWKVANYMIRSEKFELGELDYMFQIAFAALAGCDRAAENIFANLPRV 195
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSH-FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
K + L+ QR+ + F+++K N +M + +++P
Sbjct: 196 YKRKKALLVLMAGSSPQRENRVVMEKLFKELKHRSWYTEASGLNQMMLFSLQPDLRKRIP 255
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
D+ E K+ + PD SY + + + + G+E + + ++ P+ D ST A
Sbjct: 256 DLFEEAKSLGVAPDVSSYNLYLGFHCKEKNASGLEEVYQMLQEDPNARPDESTLLILACG 315
Query: 247 YIKANLIDKASDVLKKAEERLE----QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
YI DKA L + EE L+ ++ YN L+ LY +K V +W + +
Sbjct: 316 YISVGCFDKAGKALVELEEGLDSGLFRRKQATYNKLLRLYGDTKDKEGVENIWSILSSRP 375
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+ ++ Y + A K +AE++ + + +T A++ Y + G A
Sbjct: 376 LKAVD-SYSYAIAAFGKAEGVHKAEEIFAKVD---GLLETNQVIAMLSVYTHYGYADKAR 431
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
+ + L K + + AGY G+ ++ Q +V + +V+
Sbjct: 432 ELFQKLPRKRMKHRLVVYKYLIAGYLREGEVKKALQVFTMGCTVLRDRCICSAWERVVLD 491
Query: 423 ILSKLGDEGSVQDVEAFVAALRTVIP--MNRQMYHAFIKANIRNGKGVDELLDSMKADGI 480
+L G V ++ + + +V+ +N ++Y +KA + +G + +D G
Sbjct: 492 LLDHFASRGEVAVIDR-IFRMNSVLKHFINMRVYRVVLKAYLNHGASLKRFMDWTMEMGF 550
Query: 481 DEDEETKEIL 490
D ET+E+L
Sbjct: 551 SVDAETRELL 560
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 147/357 (41%), Gaps = 15/357 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y Q ++A M G + TYN ++ K G+YE+ +V EM
Sbjct: 262 TYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 321
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD+ +YR + + D E I +M S+ +V D ++S + ++
Sbjct: 322 LRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSR-DVVPDLVCFSSMMSLFTRSGN 380
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYI 311
+DKA +E D + Y LI Y G SE + L ++ + C + Y
Sbjct: 381 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDV-VTYN 439
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T+L L K EA+K+ E G D+ +I G+C G +QNA + + + EK
Sbjct: 440 TILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEK 499
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
++ + G+ G + + +S K P P + +++ L +G
Sbjct: 500 RIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS-----KEILPTPISFSILVNALCSKG 554
Query: 432 SVQDVEAFVA---ALRTVIPMNRQMYHAFIKANIRNGKGVDE--LLDSMKADGIDED 483
+ EAF + I + ++ IK R+G D L+ M ++G D
Sbjct: 555 HLS--EAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPD 609
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 132/322 (40%), Gaps = 43/322 (13%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L+ Y R+ +A++ +M + G A+ +TYN I+ K + + EM
Sbjct: 403 YTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 462
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ +FPD+++ I I+ + +L+ + ++M+ + I LD TY + + K I
Sbjct: 463 ERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMK-EKRIKLDVVTYNTLLDGFGKVGDI 521
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD----------------- 296
D A ++ + I ++ L++ S G+ SE R+WD
Sbjct: 522 DTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSM 581
Query: 297 ----------------LEKTACKRYINR--DYITMLEALMKLGEHEEAEKVLKEWE--LS 336
LEK + ++ Y T++ +K +A ++K+ E
Sbjct: 582 IKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQG 641
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G D N+++ G+C ++ AEA+L ++E+G +++ + G+
Sbjct: 642 GLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEA 701
Query: 397 FQCMKAALSVYVEGKGWKPDPK 418
F+ L +G+ PD K
Sbjct: 702 FRFHDEMLQ-----RGFSPDDK 718
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/332 (18%), Positives = 128/332 (38%), Gaps = 39/332 (11%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
AL+ VR + A ++++ G+ ++ T N ++ K G+ EKV L+E++ K
Sbjct: 195 ALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEK 254
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVL----------------- 235
++PD +Y I++Y ++ +E ++ M S+ P +
Sbjct: 255 GVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERA 314
Query: 236 --------------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
D +TY S K + ++ R D + ++ ++SL
Sbjct: 315 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSL 374
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+ GN + L ++ K A N Y +++ + G EA + E G + D
Sbjct: 375 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMD 434
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
N ++ G C ++ A+ + ++ E+G + ++ G+ G + + K
Sbjct: 435 VVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFK 494
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
++ K K D ++L G G +
Sbjct: 495 K-----MKEKRIKLDVVTYNTLLDGFGKVGDI 521
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKM--KEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+Y L+ +V++ KA +KM K+ G+ TYN I+ + + Q ++ VL
Sbjct: 612 SYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLR 671
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDL 217
+M + + PD +Y IN + ++ +L
Sbjct: 672 KMIERGVNPDRSTYTSLINGFVSQDNL 698
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 146/364 (40%), Gaps = 11/364 (3%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ Y +L++ D S F K KEMG+ ++ + N ++ + G E+V V
Sbjct: 145 ECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRR 204
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
MK I P FSY +N +E E + ME+ I D TY + Y +
Sbjct: 205 MKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENG-KIGPDVVTYNTMIKGYCEVG 263
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
KA + LK E R D I Y LI + G+ L L+ Y
Sbjct: 264 KTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYS 323
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++ L K G+ E V + G + I A+I G + A + + + ++
Sbjct: 324 LVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKE 383
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G ++ V+ +G+ + + M+ + GKG + +S++ LG G
Sbjct: 384 GLEPDEVTYGVIVNSLCKSGRLDEALEYME-----FCSGKGVAVNAMFYSSLIDGLGKSG 438
Query: 432 SVQDVE-AFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELL---DSMKADGIDEDEETK 487
V + E F ++ P + Y+A I A + GK +DE L M+ DG D+ T
Sbjct: 439 RVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGK-IDEALALSKRMEVDGCDQTVYTY 497
Query: 488 EILV 491
IL+
Sbjct: 498 TILI 501
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 13/259 (5%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E + +Y L+N V + + A F M+ I +TYN ++ Y + G+ K +
Sbjct: 211 EPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFE 270
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ-----PHIVLDWSTYAS 242
L M+ +N+ PD +Y I + A D + + EM+ + PH+ Y+
Sbjct: 271 KLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHV------YSL 324
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
K + V + + + + Y LI A GN E + L+ K
Sbjct: 325 VIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEG 384
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
Y ++ +L K G +EA + ++ G + + +++I G +G V AE
Sbjct: 385 LEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAE 444
Query: 363 AILEDLVEKGKATTPNSWA 381
I ++V+KG P+S+
Sbjct: 445 RIFYEMVKKG--CPPDSYC 461
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 115/275 (41%), Gaps = 6/275 (2%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
N+ D+ TY T + CY + D L + +M E G+ + Y+ ++ K G+
Sbjct: 279 NVAPDKITYMTL--IQACYA-EGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKR 335
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
+ V M +K + Y I+S ++ ++ + M+ + + D TY
Sbjct: 336 VEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKE-GLEPDEVTYGV 394
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTA 301
+ K+ +D+A + ++ + + + Y+ LI G E R+ +++ K
Sbjct: 395 IVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKG 454
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
C + Y +++AL K G+ +EA + K E+ G +I G + A
Sbjct: 455 CPPD-SYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEA 513
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
+ + +++KG T ++ ++ G +GK R
Sbjct: 514 LTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARA 548
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 15/234 (6%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--K 125
I+ L K R +ALE ++ + KG+ V A ++ +D +G+ AE F + K
Sbjct: 395 IVNSLCKSGRLDEALEYMEFCSGKGVAVNA-MFYSSLIDGLGKSGRVDEAERIFYEMVKK 453
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
Y AL++ + + D+AL+ ++M+ G + TY ++ + + E+
Sbjct: 454 GCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEA 513
Query: 186 PDVLTEMKAKNIFPDNFSYR-----ICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ M K I P ++R +C++ AR+ IL EM P V+ + +
Sbjct: 514 LTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACK-----ILDEM--APMGVIPETAF 566
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
+ KA I +A + +R + G LI+ GN L+L
Sbjct: 567 DDMINILCKAGRIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKL 620
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 143/362 (39%), Gaps = 45/362 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T + Y R + +A+ +M+ MG+ ++ + Y+ +M Y G E +L +
Sbjct: 220 TVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESL 279
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ K + P+ +Y + + Y +E E +++EM+ IV+D Y + Y +
Sbjct: 280 QRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGR 339
Query: 253 IDKASDVLKKAEERLEQKD-GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+D A+ V R E +D GI N + Y
Sbjct: 340 MDDATRV------RNEMRDAGIHVNLFV------------------------------YN 363
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
TM+ L KLG EE +KVL+E E G D N +I GYC G ++ A + +V
Sbjct: 364 TMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRN 423
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G A T ++ + G+ + + L + +G P+ +++L L G
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALR-----LWFLMLKRGVAPNEISCSTLLDGLFKAG 478
Query: 432 SV-QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETKE 488
Q + + L + N ++ I + G+ +ELLD MK D T
Sbjct: 479 KTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYR 538
Query: 489 IL 490
L
Sbjct: 539 TL 540
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 165/443 (37%), Gaps = 67/443 (15%)
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
KG C D A++L + G E S L D + +T++A
Sbjct: 437 KGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDG-------------LFKAGKTEQA 483
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
L+ +++ G+A + +T+N ++ K G+ + ++L MK PD+ +YR +
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDG 543
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI----DKASDVLKKAEER 266
Y L ++ +ME L ++ + +I + I K +D+ + R
Sbjct: 544 YCKLGQLGTATHLMNKMEH-----LGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSAR 598
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALM----KLGE 322
+ + Y LI+ + GN E L+ E N + + ALM K G+
Sbjct: 599 GLSPNLVTYGALIAGWCKEGNLHEACNLY-FEMVNNGMNPN---VFICSALMSCFYKEGK 654
Query: 323 HEEAEKVLKEWE-------------------------LSGNSYDTRIP-NAVIIGYCNNG 356
+EA VL++ GN + + N +I G C +G
Sbjct: 655 VDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSG 714
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
+ +A+++ E L K +++ + G +G + F LS G P+
Sbjct: 715 RIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSA-----GLTPN 769
Query: 417 PKVITSILSKLGDEGSV-QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLD 473
S++ L G + + V F I N Y+ I + GK + +L
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQ 829
Query: 474 SMKADGIDEDEETKEILV---CT 493
M +GI T IL+ CT
Sbjct: 830 KMVEEGIQPTVITYSILIYGLCT 852
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 85/185 (45%), Gaps = 9/185 (4%)
Query: 117 AESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A+S F +L++ TY +L++ D+A S M G+ + +TYN ++
Sbjct: 719 AKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIY 778
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQP 231
K+G+ + ++ ++++K I P+ +Y I+ Y G ++ ++ + E QP
Sbjct: 779 GLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQP 838
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
++ TY+ + +++A +L + E + I Y LI Y GN E+
Sbjct: 839 TVI----TYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEI 894
Query: 292 LRLWD 296
+L+D
Sbjct: 895 SKLYD 899
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/286 (18%), Positives = 110/286 (38%), Gaps = 64/286 (22%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEM----GIALSTL----------------------TY 169
AL++C+ ++ + D+A +K+ + G ++ST+ +
Sbjct: 644 ALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMW 703
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N I+ K+G+ + ++ K PDNF+Y I+ A ++ LR++
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDE-AFSLRDVML 762
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + TY S + K+ + +A ++ K + + +GI YN LI Y G +
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
E +L +K+++E T I +++
Sbjct: 823 EAFKL-------------------------------KQKMVEE-----GIQPTVITYSIL 846
Query: 350 I-GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
I G C G ++ A +L+ ++E ++ + GY +G E
Sbjct: 847 IYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNME 892
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 69/362 (19%), Positives = 142/362 (39%), Gaps = 46/362 (12%)
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
A Q + +H +SA NL TYGAL+ + ++ +A + + +M G
Sbjct: 582 AKQWHKVNDIHSEMSARGLSPNL-------VTYGALIAGWCKEGNLHEACNLYFEMVNNG 634
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
+ + + +M + K G+ ++ VL ++ ++ P G
Sbjct: 635 MNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP-------------------GCS 675
Query: 222 IILREMESQPHIV---LDWSTYASAAHFYI------KANLIDKASDVLKKAEERLEQKDG 272
I E++ H+V D + +++ + + K+ I A + + + D
Sbjct: 676 ISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDN 735
Query: 273 IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
Y+ LI A+ G+ E L D+ +A Y +++ L K G+ A + +
Sbjct: 736 FTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNK 795
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
+ G S + N +I YC G A + + +VE+G T +++++ G G
Sbjct: 796 LQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGY 855
Query: 393 TERGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKLGDEGSVQDVEAFV--AALRTVIP 448
E + + + V DP IT +++ G+++++ +R ++P
Sbjct: 856 MEEAIKLLDQMIENNV-------DPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908
Query: 449 MN 450
N
Sbjct: 909 TN 910
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y ++ +T +A +KM E GI + +TY+ ++ G E+ +L +M
Sbjct: 807 TYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM 866
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDW 237
N+ P+ +Y I+ Y ++E + + EM + + +W
Sbjct: 867 IENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNW 911
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 158/381 (41%), Gaps = 21/381 (5%)
Query: 116 SAESYFSNLKDDEKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
SA+ +F K+ + YG ++ Y ++ DKA + R+M+E GI Y+ +M
Sbjct: 1 SADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMM 60
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
Y+ G +K V K + P +Y IN Y + + +EME I
Sbjct: 61 DGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEME-HAGI 119
Query: 234 VLDWSTYASAAHFYIK----ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ TY+ + ++K AN D++K + D + YN +I+ + +G
Sbjct: 120 KHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG----IKPDVVLYNNIITAFCGMGKMD 175
Query: 290 E-VLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
V + +++K K R ++ ++ + GE ++A V +SG NA+
Sbjct: 176 RAVCTVKEMQKQRHKP-TTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNAL 234
Query: 349 IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYV 408
I+G ++ AE IL+++ G + +++ + GY G T + F A +
Sbjct: 235 ILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAF-----AYFTKL 289
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK- 466
+G + D ++L G +Q A + IP N +Y+ I R G
Sbjct: 290 RDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDV 349
Query: 467 -GVDELLDSMKADGIDEDEET 486
+L+ MK +G+ D T
Sbjct: 350 WEAADLMQQMKREGVQPDIHT 370
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 21/227 (9%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGF-------LSAESY 120
II ++ +AL+V D M G C+ P H ++G V + E
Sbjct: 199 IIHGFARKGEMKKALDVFDMMRMSG-CI--PTVHTYNALILGLVEKRKMEKAEQILDEMT 255
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+ + +E TY T +++ Y T KA ++F K+++ G+ L TY ++ K+G
Sbjct: 256 LAGVSPNEHTYTT---IMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSG 312
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ + V EM A+NI + F Y I I+ + R D+ ++++M+ + + D TY
Sbjct: 313 RMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREG-VQPDIHTY 371
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN 287
S +I N KA D +++A + +E+ +G + Y +L N
Sbjct: 372 TS----FI--NACSKAGD-MQRATKTIEEMKSVGVKPNVKTYTTLIN 411
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 130/328 (39%), Gaps = 41/328 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG L+N Y + + KAL ++M+ GI + TY+ ++ + K + + ++
Sbjct: 90 TYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDL 149
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
I PD Y I ++ ++ ++EM+ Q H T+ H + +
Sbjct: 150 IKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTT-RTFMPIIHGFARKGE 208
Query: 253 IDKASDV----------------------------LKKAEERLEQKDGIG-------YNF 277
+ KA DV ++KAE+ L++ G Y
Sbjct: 209 MKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTT 268
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
++ YASLG+ + + + + Y +L+A K G + A V KE
Sbjct: 269 IMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQN 328
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+T I N +I G+ G V A +++ + +G +++ AG +R
Sbjct: 329 IPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRAT 388
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILS 425
+ ++ SV G KP+ K T++++
Sbjct: 389 KTIEEMKSV-----GVKPNVKTYTTLIN 411
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 163/367 (44%), Gaps = 22/367 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ + +TDKA +M + G+ T+T+N IM K G++E+ +L M
Sbjct: 263 TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 322
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+N P +Y I+ + +++ + ++ E S V D TY+ A K
Sbjct: 323 AERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSS-GFVPDVVTYSILADGLCKRGR 381
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
ID+A +++K+ + + + YN LI L S+ + ++L ++ D +T
Sbjct: 382 IDEAFELVKEMSGKGCTPNLVTYNTLID---GLCKASKTEKAYELLESLVSSGFVPDVVT 438
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+++ L K G ++A K+++ G + A++ G C G V A I +++V
Sbjct: 439 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 498
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
K ++ + GY + +T K A V V+G P V +++
Sbjct: 499 SKDCTADALAYVSLVNGYCKSSRT-------KEAQKV-VDGIRGTPYIDVYNALMDGYCK 550
Query: 430 EGSVQDVEAFV--AALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDE 484
EG + ++ A R +P N + Y+ + ++GK VDE L+SM + G D
Sbjct: 551 EGRLDEIPNVFEDMACRGCVP-NIKTYNIVMDGLCKHGK-VDEAFPFLESMHSAGCVPDV 608
Query: 485 ETKEILV 491
+ I++
Sbjct: 609 VSYNIII 615
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 144/342 (42%), Gaps = 18/342 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++ + Q DKA + K K G Y + + KTG+ + ++ +
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI 221
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD +Y I+ + ++D +G L+EM + + D TY KA+
Sbjct: 222 PS----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNER-KVAPDVFTYNILIDGLCKASK 276
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
DKAS++L + +R D + +N ++ G L + R Y T
Sbjct: 277 TDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNT 336
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ L K + A+ ++ E+ SG D + + G C G + A +++++ G
Sbjct: 337 LISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM--SG 394
Query: 373 KATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
K TPN ++ + G A KTE+ ++ +++ +S G+ PD T I+ L E
Sbjct: 395 KGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVS-----SGFVPDVVTYTIIVDGLCKE 449
Query: 431 GSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVDE 470
G + V + R P + Y A ++ R G+ VDE
Sbjct: 450 GRLDKALKMVEGMLKRGCTP-SVITYTALMEGLCRTGR-VDE 489
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 122/306 (39%), Gaps = 15/306 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L + ++ + D+A ++M G + +TYN ++ K + EK ++L +
Sbjct: 368 TYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESL 427
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
+ PD +Y I ++ L+ ++ M + P ++ TY + +
Sbjct: 428 VSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVI----TYTALMEGLCR 483
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+D+A + K+ + D + Y L++ Y E ++ D + YI+
Sbjct: 484 TGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT--PYIDV- 540
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ K G +E V ++ G + + N V+ G C +G V A LE +
Sbjct: 541 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 600
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G S+ ++ G F A K + Q + + G PD +++++
Sbjct: 601 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA-----GIPPDAVTYNTLMAQFCK 655
Query: 430 EGSVQD 435
E D
Sbjct: 656 EERFDD 661
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 6/238 (2%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y AL++ Y ++ + D+ + F M G + TYN +M K G+ ++ L M
Sbjct: 541 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 600
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ PD SY I I+ S + +L +M Q I D TY + + K
Sbjct: 601 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQM-IQAGIPPDAVTYNTLMAQFCKEERF 659
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYAS---LGNKSEVLRLWDLEKTACKRYINRDY 310
D A +LK + D + YN LIS + LG+ E++ ++ + C Y
Sbjct: 660 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMH--EMLRNGCVVSACTTY 717
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
T+++ L K G ++A ++ G +T N I C G + A ++L ++
Sbjct: 718 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 775
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 116/307 (37%), Gaps = 41/307 (13%)
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
R + A+ F + G ST T N + + G +++P + M PD++
Sbjct: 102 RLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSY 161
Query: 203 SYRICINSYGARSDLEGMEIILREMES---QPHIVL------------------------ 235
+Y + I S + ++ +L + + +P + +
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI 221
Query: 236 ---DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
D Y + H + + N D A + LK+ ER D YN LI L S+
Sbjct: 222 PSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILID---GLCKASKTD 278
Query: 293 RLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+ ++ R + D +T +++ L K G+ E A +L N +I
Sbjct: 279 KASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLI 338
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
G C V A+ ++++ V G +++++A G G+ + F+ +K +
Sbjct: 339 SGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKE-----MS 393
Query: 410 GKGWKPD 416
GKG P+
Sbjct: 394 GKGCTPN 400
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T T+ L++ + + ++ D+AL+ M + G + S +TYN ++ K + +K ++
Sbjct: 816 TSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELF 875
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEI--ILREMESQPHIV--LDWSTYASAAH 245
EM + I + SY + I YG G E +L EM S + L W A +
Sbjct: 876 DEMAVRGIVASSVSYTVLI--YGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDVAPHSQ 933
Query: 246 F 246
F
Sbjct: 934 F 934
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 50/270 (18%), Positives = 106/270 (39%), Gaps = 10/270 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +++ + + +A +M + GI +TYN +M + K +++ +L M
Sbjct: 610 SYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNM 669
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PDN +Y I+ + L ++ EM +V +TY + K
Sbjct: 670 IKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGC 729
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
+ +A ++ + + + YN I G E L T RD
Sbjct: 730 LKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL------RDEVS 783
Query: 310 YITMLEALMKLGEHEEAEKVLKEW-ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y T++ L K + + A K+ +E + G + N +I + + A +L +
Sbjct: 784 YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLM 843
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
V++G + + ++ +V K ++ ++
Sbjct: 844 VQRGCSPSVITYNMVITCLCKLDKVDKAWE 873
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 134/354 (37%), Gaps = 35/354 (9%)
Query: 48 PELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDL 107
P L++ G V II L K + +A +V D M + GI P D L
Sbjct: 594 PFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI----PPDAVTYNTL 649
Query: 108 IGRV---HGFLSAESYFSNL-----KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
+ + F A N+ D TY T + L+ QT++ + M E
Sbjct: 650 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLS------QTNRLGDAYELMHE 703
Query: 160 M---GIALSTLT-YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARS 215
M G +S T YN I+ K G ++ ++ M + + +Y I I+
Sbjct: 704 MLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEG 763
Query: 216 DLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK----D 271
L+ +L EM++ + D +Y + KA +D+AS K A E + K
Sbjct: 764 RLDEASSLLSEMDT----LRDEVSYTTVIIGLCKAEQLDRAS---KLAREMVAVKGLCIT 816
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLE-KTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
+N LI + E L L L + C + Y ++ L KL + ++A ++
Sbjct: 817 SHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVIT-YNMVITCLCKLDKVDKAWELF 875
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
E + G + +I G C G + A +LE++ W VA
Sbjct: 876 DEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDVA 929
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 160/373 (42%), Gaps = 23/373 (6%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E TY +L++ + + D+A F MK + + S +TYN ++ +TG+ E+
Sbjct: 7 EPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMA 66
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ--PHIVLDWSTYASAAH 245
+ EM + D S+ I + +E R+M+ + P+++ TY+
Sbjct: 67 LFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVI----TYSVLID 121
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
KAN + +A ++L+ + R D I Y L+ L +S+V W++ +
Sbjct: 122 GLCKANRVSQAVELLESMKARGCSPDVITYTILVD---GLCKESKVAAAWEVLREMLDAG 178
Query: 306 INRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+ +T +L L + +A ++++ G + + +I G C G V++A
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
A+L D+++KG + ++ G A + + ++ A+S G KPD +S
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS-----GGIKPDVVTYSS 293
Query: 423 ILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVDELLD---SMKAD 478
++ L + + + +++ P + +Y I + GK VDE D M D
Sbjct: 294 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGK-VDEAFDLYEVMTGD 352
Query: 479 GIDEDEETKEILV 491
G D D T L+
Sbjct: 353 GCDADVVTYSTLI 365
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 138/325 (42%), Gaps = 12/325 (3%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L K R SQA+E+ + M +G C + + +D + + +A + D
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARG-CSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177
Query: 128 E--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
TY +LL+ R R+ AL+ R M G + +TY ++ K G+ +
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYAS 242
+L +M K PD Y + IN ++ +LR S +P +V TY+S
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVV----TYSS 293
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTA 301
+ ++N +D+A +L + R D I Y+ LI G E L++ +
Sbjct: 294 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG 353
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
C + Y T+++ L K G +EA +L G T N++I G C+ + A
Sbjct: 354 CDADVVT-YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEA 412
Query: 362 EAILEDLVEKGKATTPNSWAVVAAG 386
++E++ A + ++ ++ G
Sbjct: 413 IELVEEMERSNCAPSAVTYNILIHG 437
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 149/317 (47%), Gaps = 18/317 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y A+++ + ++ + A F++++ GI + +TY ++ + ++ +L++M
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 194 AKNIFPDNFSYRICINSYGARSD-LEGMEII--LREMESQPHIVLDWSTYASAAHFYIKA 250
K I P+ +Y ++++ LE E+ + M P IV TY+S +
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV----TYSSLINGLCLH 308
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD- 309
+ ID+A+ + + D + YN LI+ + + ++L+ + +R + +
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF---REMSQRGLVSNT 365
Query: 310 --YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+++ + G+ ++A++ + + G S D N ++ G C+NG ++ A I ED
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ ++ ++ V G GK E + + +LS+ KG KPD T+++S L
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWS-LFCSLSL----KGLKPDIVTYTTMMSGL 480
Query: 428 GDEGSVQDVEAFVAALR 444
+G + +VEA ++
Sbjct: 481 CTKGLLHEVEALYTKMK 497
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 145/334 (43%), Gaps = 22/334 (6%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDL 107
+D V+ G K + II L K KR + A + + RKGI P + ++
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI---RPNVVTYTALVNG 234
Query: 108 IGRVHGFLSAESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
+ + A S++ + T TY ALL+ +V+ + +A F +M M I
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 166 TLTYNDI---MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+TY+ + +CL+ + + ++ D+ M +K D SY IN + +E
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDL---MVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+ REM SQ +V + TY + + +A +DKA + + + D YN L+
Sbjct: 352 LFREM-SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 283 ASLGNKSEVLRLW-DLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGN 338
G + L ++ D++K R ++ D Y T++ + K G+ EEA + L G
Sbjct: 411 CDNGELEKALVIFEDMQK----REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
D ++ G C GL+ EA+ + ++G
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 116/271 (42%), Gaps = 13/271 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ LL+ V+ ++ D +S +KM+ +GI T+N ++ + Q +L +M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 194 AKNIFPDNFSYRICINSYGAR---SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
PD + +N + R SD + + E+ +P IV Y + K
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV----AYNAIIDSLCKT 203
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
++ A D K+ E + + + + Y L++ + S+ RL K+ I +
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL---SDMIKKKITPNV 260
Query: 311 IT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
IT +L+A +K G+ EA+++ +E D +++I G C + + A + +
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+V KG S+ + G+ A + E G +
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 162/369 (43%), Gaps = 30/369 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ AL++ + ++ D AL +M++ GI S + YN ++ Y K G+ + +++ EM
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+AK + PD +Y I+ Y +L+ + ++M + ++ D TY+S +
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKK-GVLPDAITYSSLIRGLCEEKR 448
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
++ A ++ + + Q D Y LI + GN + L L D + K + Y
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT--Y 506
Query: 311 ITMLEALMKLGEHEEAEKVL---------------KEWELSGNSYDTRIPNAVIIGYCNN 355
++ L K +EA ++L L + + + A++ G+C
Sbjct: 507 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMK 566
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
GL++ A+ + + ++++ + ++++ G+ G + K L G+ P
Sbjct: 567 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLR-----SGFSP 621
Query: 416 DPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM-NRQMYHAFIKANIRNGKGVDELLD- 473
+ S++ L +EG V + + + L T P+ + + A I N + G VD L+D
Sbjct: 622 NSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGN-VDALIDV 680
Query: 474 --SMKADGI 480
M DG+
Sbjct: 681 LCGMARDGL 689
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 154/356 (43%), Gaps = 20/356 (5%)
Query: 147 TDKALSHFRK----MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
+D +L R+ M G+A + TYN ++ G+ E+ V+ +M+ P+
Sbjct: 129 SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAV 188
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
+Y + ++ +L+G E ++ M + + + T+ S + KA ++ A V +
Sbjct: 189 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMK 319
D + YN L+S Y +G E L ++ E T +R + D +T ++ A K
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFS-EMT--QRGLVPDVVTFTSLIHATCK 305
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
G E+A ++ + G + A+I G+C G + +A +E++ + G +
Sbjct: 306 AGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVC 365
Query: 380 WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
+ + GY G+ + + ++ +E K KPD ++I+S G++
Sbjct: 366 YNALINGYCKLGRMDLARELIRE-----MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420
Query: 440 VAAL--RTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
+ + V+P + Y + I+ + D EL ++M G+ DE T L+
Sbjct: 421 NQKMLKKGVLP-DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLI 475
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 161/375 (42%), Gaps = 20/375 (5%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L + +++G V ++R L R R +A+ V M G C + +
Sbjct: 140 LSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAG-CAPNAVTYNTLVAAFC 198
Query: 110 RVHGFLSAESYFSNLKDD---EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
R AE S ++++ + T+ +++N + + + A F +M G+A
Sbjct: 199 RAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDV 258
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
++YN ++ Y K G + V +EM + + PD ++ I++ +LE ++ +
Sbjct: 259 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
M + + ++ T+ + + K +D A +++ + Q + YN LI+ Y LG
Sbjct: 319 MRER-GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377
Query: 287 N---KSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
E++R ++E K + Y T++ K+G + A ++ ++ G D
Sbjct: 378 RMDLARELIR--EMEAKRVKPDV-VTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAA 403
+++I G C + +A + E++++ G ++ + G+ G E+ A
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK-------A 487
Query: 404 LSVYVE--GKGWKPD 416
LS++ E KG PD
Sbjct: 488 LSLHDEMIRKGVLPD 502
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 140/348 (40%), Gaps = 45/348 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T + Y R + +A+ +M+ MG+ ++ + Y+ +M Y G E +L +
Sbjct: 220 TVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESL 279
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ K + P+ +Y + + Y +E E +++EM+ IV+D Y + Y +
Sbjct: 280 QRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGR 339
Query: 253 IDKASDVLKKAEERLEQKD-GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+D A+ V R E +D GI N + Y
Sbjct: 340 MDDATRV------RNEMRDAGIHVNLFV------------------------------YN 363
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
TM+ L KLG EE +KVL+E E G D N +I GYC G ++ A + +V
Sbjct: 364 TMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRN 423
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G A T ++ + G+ + + L + +G P+ +++L L G
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALR-----LWFLMLKRGVAPNEISCSTLLDGLFKAG 478
Query: 432 SV-QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMK 476
Q + + L + N ++ I + G+ +ELLD MK
Sbjct: 479 KTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMK 526
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 152/411 (36%), Gaps = 62/411 (15%)
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
KG C D A++L + G E S L D + +T++A
Sbjct: 437 KGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDG-------------LFKAGKTEQA 483
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
L+ +++ G+A + +T+N ++ K G+ + ++L MK PD+ +YR +
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDG 543
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI----DKASDVLKKAEER 266
Y L ++ +ME L ++ + +I + I K +D+ + R
Sbjct: 544 YCKLGQLGTATHLMNKMEH-----LGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSAR 598
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALM----KLGE 322
+ + Y LI+ + GN E L+ E N + + ALM K G+
Sbjct: 599 GLSPNLVTYGALIAGWCKEGNLHEACNLY-FEMVNNGMNPN---VFICSALMSCFYKEGK 654
Query: 323 HEEAEKVLKEWE-------------------------LSGNSYDTRIP-NAVIIGYCNNG 356
+EA VL++ GN + + N +I G C +G
Sbjct: 655 VDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSG 714
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
+ +A+++ E L K +++ + G +G + F LS G P+
Sbjct: 715 RIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSA-----GLTPN 769
Query: 417 PKVITSILSKLGDEGSV-QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK 466
S++ L G + + V F I N Y+ I + GK
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 96/246 (39%), Gaps = 47/246 (19%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEM----GIALSTL----------------------TY 169
AL++C+ ++ + D+A +K+ + G ++ST+ +
Sbjct: 644 ALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMW 703
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N I+ K+G+ + ++ K PDNF+Y I+ A ++ LR++
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDE-AFSLRDVML 762
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + TY S + K+ + +A ++ K + + +GI YN LI Y G +
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 290 EVLRLWD------------------LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
E +L +E YI Y T++ +K G EE K+
Sbjct: 823 EAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYIT--YCTLIHGYIKSGNMEEISKLYD 880
Query: 332 EWELSG 337
E + G
Sbjct: 881 EMHIRG 886
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 115/296 (38%), Gaps = 35/296 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L + Y + Q A KM+ +G A S +N + + Q+ KV D+ +EM
Sbjct: 536 TYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEM 595
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
A+ + P+ +Y I + +L + EM + P++ + A + FY +
Sbjct: 596 SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFI---CSALMSCFYKE 652
Query: 250 -----ANL--------------------IDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
ANL IDK S V+ + + +N +I
Sbjct: 653 GKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCK 712
Query: 285 LGNKSEVLRLWDLEKTACKRYI--NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
G ++ L+ E KR++ N Y +++ G +EA + +G + +
Sbjct: 713 SGRIADAKSLF--ESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNI 770
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
N++I G C +G + A + L KG + ++ + Y GKT F+
Sbjct: 771 ITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFK 826
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 110/280 (39%), Gaps = 35/280 (12%)
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
A Q + +H +SA NL TYGAL+ + ++ +A + + +M G
Sbjct: 582 AKQWHKVNDIHSEMSARGLSPNL-------VTYGALIAGWCKEGNLHEACNLYFEMVNNG 634
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
+ + + +M + K G+ ++ VL ++ ++ P G
Sbjct: 635 MNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP-------------------GCS 675
Query: 222 IILREMESQPHIV---LDWSTYASAAHFYI------KANLIDKASDVLKKAEERLEQKDG 272
I E++ H+V D + +++ + + K+ I A + + + D
Sbjct: 676 ISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDN 735
Query: 273 IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
Y+ LI A+ G+ E L D+ +A Y +++ L K G+ A + +
Sbjct: 736 FTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNK 795
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+ G S + N +I YC G A + + +VE+G
Sbjct: 796 LQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 178/404 (44%), Gaps = 22/404 (5%)
Query: 100 DHAVQ--LDLIGRVHGFLSAESYFSNLKDDEKTYQTYGA--LLNCYVRQRQTDKALSHFR 155
D +V+ + ++GR + A F + +E + +L+ Y R + +A+ F
Sbjct: 202 DQSVEFMVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFE 261
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQ-YEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR 214
KMKE G+ + +TYN ++ +Y K G+ + + ++L EM++K + D F+ I++ G
Sbjct: 262 KMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGRE 321
Query: 215 SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
L+ +++ + +TY S + KA + +A ++LK+ E+ + D I
Sbjct: 322 GILDEARRFFDDLKLNGYKP-GTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAIT 380
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
YN L++ Y G E + D + Y T++ A K G+ ++A +V + +
Sbjct: 381 YNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMK 440
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G + N V++ ++ IL D+ G +W + A + GK +
Sbjct: 441 ELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQK 500
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-----EAFVAALRTVIPM 449
Q ++ ++ G++PD + +++S G GS DV E A I
Sbjct: 501 FVSQVLRE-----MKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCI-- 553
Query: 450 NRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
Y+A + A R G K + ++ M+ G +E + +L+
Sbjct: 554 --TTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLL 595
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 7/263 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ALLN R+ A S M++ G + +Y+ ++ YSK G + V E+
Sbjct: 555 TYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEI 614
Query: 193 KAKNIFPDNFSYR-ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
++FP R + + +Y R L+GME ++++ + LD S +++
Sbjct: 615 YDGHVFPSWMLLRTLVLTNYKCRQ-LKGMERAFHQLQNNGY-KLDMVVINSMLSMFVRNQ 672
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN--KSEVLRLWDLEKTACKRYINRD 309
++KA ++L Q + + YN LI LYA +G+ K+E + L D++ + +
Sbjct: 673 KLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEM-LKDIQNSGISPDV-VS 730
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+++ K G +EA ++L E +G N + Y NGL A+ ++ ++
Sbjct: 731 YNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMI 790
Query: 370 EKGKATTPNSWAVVAAGYFDAGK 392
E G ++ +V GY A K
Sbjct: 791 EHGCMPNELTYKIVIDGYIKAKK 813
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 153/341 (44%), Gaps = 21/341 (6%)
Query: 76 KRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQT 133
+ +S LE+ D M KG+ F + GR A +F +LK + + T
Sbjct: 287 RAWSMILELLDEMRSKGL-EFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTAT 345
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y ++L + + +AL+ ++M++ +TYN+++ Y + G +++ V+ M
Sbjct: 346 YNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMA 405
Query: 194 AKNIFPDNFSYRICINSYGARSDLE-GMEII--LREMESQPHIVLDWSTYASAAHFYIKA 250
+K + P+ +Y IN+YG D + +E+ ++E+ P++ TY + K
Sbjct: 406 SKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVC----TYNNVLVLLGKR 461
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK---SEVLRLWDLEKTACKRYIN 307
+ + +L + D I +N ++++ G + S+VLR E C +
Sbjct: 462 SRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLR----EMKNCGFEPD 517
Query: 308 RD-YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
++ + T++ A + G + K+ E +G + NA++ G + AE+++
Sbjct: 518 KETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVL 577
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
D+ +KG S++++ Y AG RG + K + +Y
Sbjct: 578 DMRKKGFKPNETSYSLLLHCYSKAGNV-RGLE--KVEMEIY 615
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 89/441 (20%), Positives = 157/441 (35%), Gaps = 88/441 (19%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV------- 185
TY ++N Y + DKAL F +MKE+G + TYN+++ L K + E +
Sbjct: 415 TYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDM 474
Query: 186 ------PD----------------------VLTEMKAKNIFPDNFSYRICINSYG---AR 214
PD VL EMK PD ++ I++YG +
Sbjct: 475 KLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSE 534
Query: 215 SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
D+ M + P I +TY + + + A V+ ++ + +
Sbjct: 535 VDVAKMYGEMVAAGFTPCI----TTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETS 590
Query: 275 YNFLISLYASLGN------------KSEVLRLWDLEKT----------------ACKRYI 306
Y+ L+ Y+ GN V W L +T A +
Sbjct: 591 YSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQ 650
Query: 307 NRDYI-------TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
N Y +ML ++ + E+A ++L +SG + N++I Y G
Sbjct: 651 NNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCW 710
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
AE +L+D+ G + S+ V G+ G + + + + G +P P
Sbjct: 711 KAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSE-----MTANGVQPCPIT 765
Query: 420 ITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKA 477
+ +S G + + + + +P N Y I I+ K + + K
Sbjct: 766 FNTFMSCYAGNGLFAEADEVIRYMIEHGCMP-NELTYKIVIDGYIKAKKHKEAMDFVSKI 824
Query: 478 DGID---EDEETKEILVCTME 495
ID +D+ K++ C E
Sbjct: 825 KEIDISFDDQSLKKLASCIRE 845
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 175/418 (41%), Gaps = 42/418 (10%)
Query: 101 HAVQL--DLIGRVHGFLSAESYFSNLKDDEKTY--QTYGALLNCYVRQRQTDKALSHFRK 156
HA++L ++GR A F + D+ + Y +L+ Y R + +A+ F +
Sbjct: 188 HAIELMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFER 247
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQ-YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARS 215
M E G++ S +TYN ++ +Y K G+ ++K+ ++L EM+++ + D F+ +++ G
Sbjct: 248 MNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREG 307
Query: 216 DLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG 272
++ ++S+ P V TY + H + KA + +A VL + EE D
Sbjct: 308 LIDEAREFFSGLKSEGYKPGTV----TYNALLHVFGKAGIFSEALSVLSEMEENNCPPDA 363
Query: 273 IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
+ YN +++ Y G E + D + Y T++ A ++G+ ++A ++ +
Sbjct: 364 VTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQ 423
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
G + NAV+ L + IL + G + +W + A
Sbjct: 424 MMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLA------- 476
Query: 393 TERGFQCMKAALSVYV-------EGKGWKPDPKVITSILSKLGDEGSVQDV-----EAFV 440
C K + YV + G++PD +++S G GS D E
Sbjct: 477 -----MCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIK 531
Query: 441 AALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILVCTMEK 496
A I Y+A + A R G K + ++ M+ G E + ++V + K
Sbjct: 532 AGFSPCI----NTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAK 585
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 150/323 (46%), Gaps = 8/323 (2%)
Query: 76 KRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQT 133
+ + + LE+ D M +G+ F + L GR A +FS LK + + T
Sbjct: 272 RSWDKILELLDEMRSRGL-DFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVT 330
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y ALL+ + + +ALS +M+E +TYN+++ Y + G +E+ V+ M
Sbjct: 331 YNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMA 390
Query: 194 AKNIFPDNFSYRICINSYGARSDLE-GMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+K I P+ +Y IN+YG D++ +E+ + ME V + +TY + K +L
Sbjct: 391 SKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELG--CVPNVATYNAVLGMLGKKSL 448
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YI 311
++ +L + + I +N ++++ G V +++ E C +RD +
Sbjct: 449 SEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFR-EMKNCGFEPDRDTFN 507
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T++ A + G + +A K+ +E +G S NA++ G + AE+++ D+ K
Sbjct: 508 TLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNK 567
Query: 372 GKATTPNSWAVVAAGYFDAGKTE 394
G + S++++ Y G +
Sbjct: 568 GFRPSETSYSLMVHSYAKGGNVK 590
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 114/270 (42%), Gaps = 13/270 (4%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E T+ L++ Y R + A +M + G + TYN ++ ++ G ++
Sbjct: 500 EPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAES 559
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
V+ +M+ K P SY + ++SY +++G+E+I + + I W +
Sbjct: 560 VILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDG-DIFPSWMLLRTLVLAN 618
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS---LGNKSEVLRLWDLEKTACKR 304
K + + ++ + D + N ++S++A E+LRL
Sbjct: 619 FKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIH------DA 672
Query: 305 YINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
+ D +T +++ + G+ +AE+VL+ + SG D N VI G+C GL+Q
Sbjct: 673 GLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEG 732
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
IL ++ G ++ +GY G
Sbjct: 733 IRILSEMTSIGVGPCIFTYNTFISGYAAQG 762
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 15/265 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ALLN R+ A S M+ G S +Y+ ++ Y+K G + + + +
Sbjct: 540 TYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSI 599
Query: 193 KAKNIFPDNFSYR-ICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYI 248
+IFP R + + ++ RS L GME + ++ +P +VL S +
Sbjct: 600 YDGDIFPSWMLLRTLVLANFKCRS-LTGMERAFQALQKHGYKPDLVL----CNSMLSIFA 654
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN---KSEVLRLWDLEKTACKRY 305
K N+ D+A ++L+ + Q D + +N L+ +YA G+ EVLR+ +T+ +
Sbjct: 655 KNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRML---QTSGGKP 711
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y T+++ + G +E ++L E G N I GY G+ ++
Sbjct: 712 DLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVI 771
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDA 390
++ ++ +VA GY A
Sbjct: 772 SYMIVHNCRPNELTYKIVADGYCKA 796
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +L++ Y R KA R ++ G ++YN ++ + + G ++ +L+EM
Sbjct: 680 THNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEM 739
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+ + P F+Y I+ Y A+ + ++ M +P+ + TY A Y K
Sbjct: 740 TSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNEL----TYKIVADGYCK 795
Query: 250 ANLIDKASDVLKKAEE 265
A D+A D + K ++
Sbjct: 796 ARRYDEAIDFVSKIKD 811
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 147/375 (39%), Gaps = 46/375 (12%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
AE +++D + Y ++++ Y + K L F ++KE G S ++Y ++
Sbjct: 377 AEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLIN 436
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
LY K G+ K V EM++ I +N +Y + IN +
Sbjct: 437 LYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGF----------------------- 473
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
H + AN D++K Q D YN L+ + +GN +R+
Sbjct: 474 ---------IHLHDFANAFSIFEDMIKSGL----QPDRAIYNLLVEAFCKMGNMDRAIRI 520
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
++ K + NR + ++E G+ + A L SG + NA+I G
Sbjct: 521 FERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIR 580
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
V+ A ++L+ + G A +++ ++ GY +G + F+ ++ G K
Sbjct: 581 KHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYF-----TKIKESGLK 635
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGK--GVDEL 471
D + ++L G +Q A + IP N +Y+ I R G +L
Sbjct: 636 LDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADL 695
Query: 472 LDSMKADGIDEDEET 486
+ MK DGI + T
Sbjct: 696 MKQMKEDGIPPNIHT 710
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 124/286 (43%), Gaps = 3/286 (1%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A + F N++ E + +L++ Y R ALS +MK G+ ++ +TY+ ++
Sbjct: 272 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIA 331
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
Y KT E + E K K + Y I+++ +++ E ++REME + I
Sbjct: 332 GYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREME-EDGID 390
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
Y S H Y A K V ++ +E + I Y LI+LY +G + L +
Sbjct: 391 APIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAV 450
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
++ ++ N+ Y ++ + L + A + ++ SG D I N ++ +C
Sbjct: 451 SKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCK 510
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCM 400
G + A I E + ++ + ++ + G+ AG +R +
Sbjct: 511 MGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTL 556
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/374 (19%), Positives = 160/374 (42%), Gaps = 31/374 (8%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ +G ++ Y ++ A + F M+ GI + + ++ Y+ + E
Sbjct: 254 REFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEE 313
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
MK++ + +Y I I YG +D E + + +E +++ L+ Y++ H + ++
Sbjct: 314 MKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLD-NLNGIIYSNIIHAHCQSG 372
Query: 252 LIDKASDVLKKAEERLEQKDGIG-----YNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
+D+A +++++ EE DGI Y+ ++ Y ++ + L +++ K R
Sbjct: 373 NMDRAEELVREMEE-----DGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPS 427
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y ++ +K+G+ +A V KE E G ++ + + +I G+ + NA +I E
Sbjct: 428 IISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFE 487
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
D+++ G + ++ + G +R + + ++ + +P + I+
Sbjct: 488 DMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFER-----MKKERMQPSNRTFRPIIEG 542
Query: 427 LGDEGSVQDVEAFVAALRTVIPMNRQ-------MYHAFIKANIRNGK--GVDELLDSMKA 477
G ++ AL T+ M R Y+A I IR + +LD M
Sbjct: 543 FAVAGDMK------RALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSI 596
Query: 478 DGIDEDEETKEILV 491
GI +E T I++
Sbjct: 597 AGIAPNEHTYTIIM 610
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 114/253 (45%), Gaps = 23/253 (9%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
LD ++G V +I L ++ + +A+ V D M+ GI AP +H + + G
Sbjct: 556 LDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGI---APNEHTYTIIMRG 612
Query: 110 RVHG--FLSAESYF-----SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
A YF S LK D Y+T LL + + AL+ R+M I
Sbjct: 613 YAASGDIGKAFEYFTKIKESGLKLDVYIYET---LLRACCKSGRMQSALAVTREMSFQKI 669
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+T YN ++ +++ G + D++ +MK I P+ ++ IN+ D++ E
Sbjct: 670 PRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAEN 729
Query: 223 ILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+++EM +P++ T+ + + K +L D+A ++ + + D Y+ L+
Sbjct: 730 VIQEMADVGLKPNV----KTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYHCLV 785
Query: 280 SLYASLGNKSEVL 292
+ SL +++ V+
Sbjct: 786 T---SLLSRATVM 795
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 116/243 (47%), Gaps = 4/243 (1%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
+L+ Y R+ +KAL+ K +E G+ + +YN+ + + EK +L M +N
Sbjct: 461 ILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRN 520
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ PD +Y I+ + R + E ++ +M ++ I + TY + +I +D A
Sbjct: 521 VLPDVVNYSTLISCFAKRLNSEKAVMLFIKM-TKVGITFNVKTYTILINLFISDCKMDVA 579
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLE 315
+ K +E D I Y L++ + + G + L+D + + C + Y +
Sbjct: 580 YRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNV-VTYTCFIN 638
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKAT 375
+KL ++ +A K+ ++ + G D + +I +CN G + AEA+ +++ ++G+
Sbjct: 639 EYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRC- 697
Query: 376 TPN 378
TPN
Sbjct: 698 TPN 700
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 100/210 (47%), Gaps = 8/210 (3%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L++C+ ++ ++KA+ F KM ++GI + TY ++ L+ + + + MK
Sbjct: 528 YSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMK 587
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKA 250
++PD +Y + + ++ + EM + P++V TY + Y+K
Sbjct: 588 ESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVV----TYTCFINEYLKL 643
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD- 309
N ++A + +K +ER D I Y LI+ + + G + L+D K + N
Sbjct: 644 NKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVM 703
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNS 339
Y ++ + +KL + ++AEK+ +E G S
Sbjct: 704 YTCLINSYIKLNKRDQAEKLYEEMRAKGLS 733
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 119/304 (39%), Gaps = 7/304 (2%)
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII 223
L+ +N ++ + G ++ +V EMK I PD +SY I I+ + + ++ +
Sbjct: 278 LNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEV 337
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
+EM + I+ + +Y+ + K +DKA +V ++ + D Y+ LI +
Sbjct: 338 FKEMRNS-GILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFC 396
Query: 284 SLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
G+ ++ W+ + +Y ++++ K + A K + + G DT
Sbjct: 397 RKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTI 456
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAA 403
N ++ YC A A+ E E G P S+ E+ Q +
Sbjct: 457 ACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVM 516
Query: 404 LSVYVEGKGWKPDPKVITSILSKLGDE-GSVQDVEAFVAALRTVIPMNRQMYHAFIKANI 462
L + PD ++++S S + V F+ + I N + Y I I
Sbjct: 517 LK-----RNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFI 571
Query: 463 RNGK 466
+ K
Sbjct: 572 SDCK 575
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y L++ + R+ + D+A F++M+ GI + +Y+ ++ + K G+ +K +V EM
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEM 376
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K I PD +SY I I+ + + D++ EM S + Y S Y K+
Sbjct: 377 KNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSN-NFSPSAFNYCSLIKGYYKSK- 434
Query: 253 IDKASDVLKKAEERLEQK-----DGIGYNFLISLYASLGNKSEVLRL 294
+ ++ LK E R+ QK D I N ++S+Y + ++ L L
Sbjct: 435 --QFANALK--EFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALAL 477
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 23/203 (11%)
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIK----ANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+L + +P+I TY +F+ + + I +AS++L K E + + Y
Sbjct: 196 VLIKFGPRPNI----HTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTY 251
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKR---YINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
I +G W L + C++ N + ++ L + G +EA +V KE +
Sbjct: 252 IKGLCKVGLFGVA---WRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKN 308
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
SG D + +I G+C G V A + +++ G S++++ G+ G+ ++
Sbjct: 309 SGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDK 368
Query: 396 GFQCMKAALSVYVEGK--GWKPD 416
AL V+ E K G PD
Sbjct: 369 -------ALEVFEEMKNSGILPD 384
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 61/318 (19%), Positives = 126/318 (39%), Gaps = 18/318 (5%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A F KDD E + LL C V + D F + + G + TY +M
Sbjct: 155 ANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMN 214
Query: 175 LYSK----TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
+ + + + ++L ++ P+ +Y I + L G+ L + +
Sbjct: 215 FFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGL-CKVGLFGVAWRLIQNLCR 273
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG---N 287
+ L+ + + + + ++D+AS+V K+ + D Y+ LI + G
Sbjct: 274 KNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQ 333
Query: 288 KSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
SEV + ++ + I Y +++ K G ++A +V +E + SG D +
Sbjct: 334 ASEVFK--EMRNSGILPNI-YSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSI 390
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
+I G+C G + +A E++ + + ++ + GY+ + + + +
Sbjct: 391 LIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRI----- 445
Query: 408 VEGKGWKPDPKVITSILS 425
++ G PD ILS
Sbjct: 446 MQKLGMWPDTIACNHILS 463
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 132/310 (42%), Gaps = 12/310 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +++ + ++ + DKA F +M G+ +TYN ++ K +K +L M
Sbjct: 202 SYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHM 261
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
K + PD +Y I I Y + LE +L++M QP +V TY+ +Y K
Sbjct: 262 FDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV----TYSLLIQYYCK 317
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+A V + ++ + Y+ L+ YA+ G +V L DL + +R
Sbjct: 318 IGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA 377
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ ++ A K G ++A E +G D + VI C G V++A +V
Sbjct: 378 FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMV 437
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+G + S+ + G G+ ++ L+ + +G PD + +I+ L
Sbjct: 438 SEGLSPNIISFTSLIHGLCSIGEWKK-----VEELAFEMINRGIHPDAIFMNTIMDNLCK 492
Query: 430 EGSVQDVEAF 439
EG V + + F
Sbjct: 493 EGRVVEAQDF 502
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 148/350 (42%), Gaps = 23/350 (6%)
Query: 146 QTDKALSH-FRKMKEMGIALSTLTYNDI---MCLYSKTGQYEKVPDVLTEMKAKNIFPDN 201
+TD A+ FR+M E+G +YN + +C+ K+ + ++ +T N P+
Sbjct: 141 RTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNV 200
Query: 202 FSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK 261
SY I+ + +++ + EM Q + D TY S KA +DKA +L+
Sbjct: 201 VSYNTVIDGFFKEGEVDKAYFLFHEMMGQG-LPPDVVTYNSLIDGLCKAQAMDKAVAILQ 259
Query: 262 KAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALM 318
++ D YN +I Y SLG E +RL K + D +T +++
Sbjct: 260 HMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLL---KKMSGSGLQPDVVTYSLLIQYYC 316
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
K+G EA V G ++ I + ++ GY G + + +L+ ++ G
Sbjct: 317 KIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHR 376
Query: 379 SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEGSVQD- 435
++ ++ Y G ++ A++ + E + G +PD ++++ L G V+D
Sbjct: 377 AFNILICAYAKHGAVDK-------AMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDA 429
Query: 436 VEAFVAALRTVIPMNRQMYHAFIKA--NIRNGKGVDELLDSMKADGIDED 483
V F + + N + + I +I K V+EL M GI D
Sbjct: 430 VYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPD 479
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 166/418 (39%), Gaps = 52/418 (12%)
Query: 117 AESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEM----GIALSTLTYN 170
A S F ++ K + Y LL+ Y T AL R + ++ GI +N
Sbjct: 324 ARSVFDSMVRKGQKPNSTIYHILLHGYA----TKGALIDVRDLLDLMIRDGIPFEHRAFN 379
Query: 171 DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
++C Y+K G +K TEM+ + PD SY I+ +E +M S+
Sbjct: 380 ILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSE 439
Query: 231 ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN 287
P+I+ ++ S H K ++ + R D I N ++ G
Sbjct: 440 GLSPNII----SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 495
Query: 288 KSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
E +D+ + Y T+++ +G+ +E+ K L G D+ N+
Sbjct: 496 VVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNS 555
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK-----------TERG 396
++ GY NG V++A A+ ++ K + ++ G F AG+ +RG
Sbjct: 556 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRG 615
Query: 397 FQ-----------------CMKAALSVY--VEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
Q C+ AL ++ + K ++ D + + +++ L G + + +
Sbjct: 616 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAK 675
Query: 438 AFVAA--LRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
+ +A LR +P + Y IK++I G + D L SM+ +G D I+V
Sbjct: 676 SLFSAMVLRGPVP-DVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIV 732
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 104/258 (40%), Gaps = 20/258 (7%)
Query: 250 ANLIDKASD-VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA-----CK 303
N D A D V ++ E D YN LI E L L + TA C
Sbjct: 139 GNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELL-IHMTADGGYNCS 197
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ Y T+++ K GE ++A + E G D N++I G C + A A
Sbjct: 198 PNV-VSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVA 256
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
IL+ + +KG ++ ++ GY G+ E + +K + G G +PD + +
Sbjct: 257 ILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKK-----MSGSGLQPDVVTYSLL 311
Query: 424 LS---KLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKAD 478
+ K+G + V F + +R N +YH + G +D +LLD M D
Sbjct: 312 IQYYCKIGRCAEARSV--FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRD 369
Query: 479 GIDEDEETKEILVCTMEK 496
GI + IL+C K
Sbjct: 370 GIPFEHRAFNILICAYAK 387
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 102/248 (41%), Gaps = 1/248 (0%)
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
+A F + +G+ ++YN ++ Y G+ ++ L M + + PD+++Y +
Sbjct: 498 EAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLL 557
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
N Y +E + REM + + T H +A I A ++ K +R
Sbjct: 558 NGYFKNGRVEDALALYREM-FRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGT 616
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
Q YN ++ E LR+++ ++ R + ++ AL+K+G +EA+
Sbjct: 617 QLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKS 676
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ L G D + +I + GL++ ++ + + + G A + ++
Sbjct: 677 LFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLL 736
Query: 389 DAGKTERG 396
+ G R
Sbjct: 737 EKGDVRRA 744
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 151/350 (43%), Gaps = 33/350 (9%)
Query: 109 GRVHGFLSAESYFSNLKD-----DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
GRVH L A F +K+ +K+Y T A+L V + Q AL +R M+EMGI
Sbjct: 96 GRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAIL---VGENQLKLALRFYRYMREMGIP 152
Query: 164 LSTLTYNDIM-CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
S + N ++ L +G + + EM + P +++Y I + +
Sbjct: 153 PSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKE 212
Query: 223 ILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+ +EME++ P +V TY S H ++ +D A +L++ + + + Y+ L+
Sbjct: 213 LFKEMETKACSPTVV----TYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLM 268
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINR--DYITMLEALMKLGEHEEAEKVLKEWELSG 337
+ G S L L D+ +R++ Y T++ L K G+ +EA ++L +L G
Sbjct: 269 DGHCKSGCSSRALELLDM--MVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQG 326
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA-------VVAAGYFDA 390
D + +I G+C+ A L+++V G + +W+ +V G
Sbjct: 327 LRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQG-LCT 385
Query: 391 GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
R FQ L + + +G D K S+++ ++G + V
Sbjct: 386 EHPNRAFQ-----LYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLV 430
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 119/282 (42%), Gaps = 19/282 (6%)
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK--NIFPDNFSYRICINSYG-ARSDL 217
G S T++ ++ + ++L MK + NI D F IC +YG L
Sbjct: 45 GFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIF-LSIC-RAYGRVHKPL 102
Query: 218 EGMEII--LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
+ + + ++E E +P +Y + + N + A + E
Sbjct: 103 DAVRVFRKMKEYECEP----SQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASL 158
Query: 276 NFLI-SLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEW 333
N LI +L + G LR++ ++ C + + Y T++ L +LG+ EA+++ KE
Sbjct: 159 NVLIKALCKNSGTMDAALRIFREMPNRGCPPH-SYTYGTLIXGLCRLGKIGEAKELFKEM 217
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
E S ++I G C + + +A +LE++ KG +++ + G+ +G +
Sbjct: 218 ETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCS 277
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
R + + +S + P+ ++++ L EG +Q+
Sbjct: 278 SRALELLDMMVS-----RRHLPNMITYSTLVHGLCKEGKLQE 314
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 177/414 (42%), Gaps = 22/414 (5%)
Query: 80 QALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAES--YFSNLKDD--EKTYQTYG 135
+ALEV M KG+ P H L + G S E+ F ++ TY
Sbjct: 294 EALEVKKLMMEKGL---GPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
AL++ ++++ ++AL +M G+ L+ +TYN ++ +K G+ K + EM
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA 410
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
+ PD ++Y + I+ Y D+ +L EM+++ + TY+ ++ + K
Sbjct: 411 GLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR-KLTPSPFTYSVLISGLCHSSDLQK 469
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YIT 312
A++VL + + + Y LI Y +S +L K + D Y
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYV---QESRYEMAIELLKIMIANGVLPDLFCYNC 526
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ L + + EEA+ +L + G + A I Y +G +Q AE +D++ G
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
+ ++ G+ D G T K L KG PD + ++I+ L G
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE-----KGLIPDIRAYSAIIHSLSKNGK 641
Query: 433 VQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
++ + F+ L+T + + +Y++ I + G + +L D M +GI+ +
Sbjct: 642 TKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN 695
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 108/496 (21%), Positives = 197/496 (39%), Gaps = 76/496 (15%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
LD ++NG K V +I+ + R+ A+E+ M G+ C + + + L
Sbjct: 474 LDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC- 532
Query: 110 RVHGFLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQ--------------------- 146
R A+ ++ K + TYGA +N Y + +
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592
Query: 147 --------------TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T +ALS F+ M E G+ Y+ I+ SK G+ ++ V +
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKF 652
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ PD F Y I+ + D+E + EM P+IV+ Y + + K
Sbjct: 653 LKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVV----YNTLINGLCK 708
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ KA ++ + EE+ D + Y+ +I Y GN +E +L+D + I+ D
Sbjct: 709 LGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFD---EMISKGISPD 765
Query: 310 ---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y +++ K G E+A + E + + N++I +C +G V A + +
Sbjct: 766 GYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAF-NSLIDSFCKHGKVIEARELFD 824
Query: 367 DLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
D+V+ K TPN ++ ++ Y A E Q L + +E + P+ TS+L
Sbjct: 825 DMVD--KKLTPNIVTYTILIDAYGKAEMMEEAEQ-----LFLDMETRNIIPNTLTYTSLL 877
Query: 425 SKLGDEGS-------VQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSM 475
G+ +D+EA A + Y A + GK ++ +LL+
Sbjct: 878 LSYNQIGNRFKMISLFKDMEARGIACDAI------AYGVMASAYCKEGKSLEALKLLNKS 931
Query: 476 KADGIDEDEETKEILV 491
+GI +++ + L+
Sbjct: 932 LVEGIKLEDDVFDALI 947
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 133/305 (43%), Gaps = 11/305 (3%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +L++ + ++ +KA + +M GI + + YN ++ K G+ K ++ E++
Sbjct: 664 YNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIE 723
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
K++ PD +Y I+ Y +L + EM S+ I D Y K +
Sbjct: 724 EKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISK-GISPDGYIYCILIDGCGKEGNL 782
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDYI 311
+KA + +A+++ +N LI + G E L+D ++K + Y
Sbjct: 783 EKALSLFHEAQQK-SVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVT--YT 839
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+++A K EEAE++ + E +T ++++ Y G ++ +D+ +
Sbjct: 840 ILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR 899
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G A ++ V+A+ Y GK+ + + +L VEG + D V +++ L E
Sbjct: 900 GIACDAIAYGVMASAYCKEGKSLEALKLLNKSL---VEGIKLEDD--VFDALIFHLCKEK 954
Query: 432 SVQDV 436
+ V
Sbjct: 955 QISTV 959
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 129/313 (41%), Gaps = 25/313 (7%)
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ--PHIVLDW 237
G + KV + E K I PD ++Y I ++ D+ +++L EME + P++
Sbjct: 224 GLFWKVYGSMVEAK---IVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLF--- 277
Query: 238 STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
TY + + +D+A +V K E+ DG Y L+ + E +++
Sbjct: 278 -TYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFES 336
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
++ Y +++ +K G EEA ++ E G + NA+I G G
Sbjct: 337 MPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGE 396
Query: 358 VQNAEAILEDLVEKGKATTPNSWA--VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK- 414
+ A ++ +++ G P++W ++ GY + M A + E K K
Sbjct: 397 MAKAMSLFNEMLMAG--LEPDTWTYNLLIDGYLKSHD-------MAKACELLAEMKARKL 447
Query: 415 -PDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDE 470
P P + ++S L +Q E +R + N MY IKA ++ + E
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507
Query: 471 LLDSMKADGIDED 483
LL M A+G+ D
Sbjct: 508 LLKIMIANGVLPD 520
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 115/284 (40%), Gaps = 13/284 (4%)
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA--LSHFRK----MKEMGIA 163
RV GFL+ S E + T L+ C R KA + F K M E I
Sbjct: 183 RVLGFLNEASSVFIASISEGFFPT---LICCNNLMRDLLKANMMGLFWKVYGSMVEAKIV 239
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEI 222
TY +++ + K G K VL+EM+ K P+ F+Y I + E +E+
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEV 298
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+++ + + D TY + K +A + + + Y LI +
Sbjct: 299 --KKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGF 356
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
GN E LR+ D T + Y M+ + K GE +A + E ++G DT
Sbjct: 357 IKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDT 416
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
N +I GY + + A +L ++ + +P +++V+ +G
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 184/444 (41%), Gaps = 41/444 (9%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I+ L KR +A E+ + + G C V + + G L A LK+
Sbjct: 114 VIKGLADSKRIDEACELFEELKTAG------CSPNV-VAYTAVIDGLLKAGRIEDGLKNF 166
Query: 128 EK--------TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
E+ T TY +++ + + A F +M + G T+TY ++ +SK
Sbjct: 167 EEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKA 226
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL--EGMEII--LREMESQPHIVL 235
+ ++ +L M K P +Y ++ + + D+ E E+I +RE +P + +
Sbjct: 227 SKMDEARKLLDVMLTKGPEPTAVTYGSIVHGF-CKLDMINEAKEVIAQMRERGCEPGLFI 285
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
+ S +Y+ ++A VL + R D I Y LI L S G E ++
Sbjct: 286 ----FTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVF 341
Query: 296 D--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
D +EK + Y T+++ K+G E A ++L+ SG D N+++ GY
Sbjct: 342 DSMIEKGCAPDALT--YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYV 399
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
V A + + +V G ++ V+ G F GKT+R F K L E +
Sbjct: 400 KLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEML----EKEEV 455
Query: 414 KPDPKVITSILSKLGDEGSVQDVEAFVAAL----RTVIPMNRQMYHAFIKANIRNGK--G 467
P T ++ LG G V EAF+ R +IP Y + I + + G+
Sbjct: 456 PPTLVSYTILIDGLGKAGRVS--EAFLQFQEMIDRGIIP-ECHTYTSLIYSLAKAGRIPE 512
Query: 468 VDELLDSMKADGIDEDEETKEILV 491
+L++ M G++ D + L+
Sbjct: 513 AKKLVEDMVKLGVNPDVQAYSALI 536
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/369 (18%), Positives = 145/369 (39%), Gaps = 10/369 (2%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--K 125
+I L K + A +V + M +KG CV + +D + A + K
Sbjct: 184 VIDGLCKAQMLPDACKVFEQMVQKG-CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 242
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
E T TYG++++ + + ++A +M+E G + ++ Y G+ E+
Sbjct: 243 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 302
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
VLTEM A+ PD Y I+ + + + M + D TY +
Sbjct: 303 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM-IEKGCAPDALTYGTIIQ 361
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
+ K ++ A ++L+ + D YN L+ Y L + ++D + +
Sbjct: 362 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 421
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII-GYCNNGLVQNAEAI 364
+ ++ L K G+ + A + KE T + ++I G G V A
Sbjct: 422 NAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQ 481
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
++++++G +++ + AG+ + ++ + + G PD + ++++
Sbjct: 482 FQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL-----GVNPDVQAYSALI 536
Query: 425 SKLGDEGSV 433
+ L D V
Sbjct: 537 TGLIDSSMV 545
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/394 (18%), Positives = 144/394 (36%), Gaps = 48/394 (12%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E T +Y +++ + D+A F M + G + + ++ + K GQ +V
Sbjct: 4 EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGH 62
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
L K PD F Y I+ Y DL+ R + P LD +Y +
Sbjct: 63 KLLNQALKRFRPDVFLYTSVIHGYCKAGDLD--TGYFRAV--TPKASLDVISYTTVIKGL 118
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD----------- 296
+ ID+A ++ ++ + + + Y +I G + L+ ++
Sbjct: 119 ADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTR 178
Query: 297 --------------LEKTACKRYINR----------DYITMLEALMKLGEHEEAEKVLKE 332
+ ACK + Y T+++ K + +EA K+L
Sbjct: 179 TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDV 238
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
G +++ G+C ++ A+ ++ + E+G + + + Y G+
Sbjct: 239 MLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR 298
Query: 393 TERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNR 451
E +Q + + +G PD + TS++ L G V + F + + +
Sbjct: 299 AEEAYQVLTE-----MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 353
Query: 452 QMYHAFIK--ANIRNGKGVDELLDSMKADGIDED 483
Y I+ + I N + E+L+ M G+ D
Sbjct: 354 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 387
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 167/400 (41%), Gaps = 57/400 (14%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---C-----------L 175
T TY L++C R + + AL+ F ++ G+ + + N ++ C L
Sbjct: 110 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDIL 169
Query: 176 YSKTGQYEKVPDV---------------------LTEMKAKN---IFPDNFSYRICINSY 211
+T + VPDV L M A+ PD +Y I+ +
Sbjct: 170 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGF 229
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
D+ + +EM Q I D+ TY+S H KA +DKA L++ + +
Sbjct: 230 FKEGDVNKACDLFKEM-VQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEK 328
YN LI Y+S G E +R++ K ++ I D +T ++ +L K G+ +EA
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVF---KEMRRQSILPDVVTFNMLMGSLCKYGKIKEARD 345
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
V + G + D N ++ GY G + + + + ++ G A ++ V+ Y
Sbjct: 346 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYA 405
Query: 389 DAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRT 445
+ G ++ A+ ++ E + G KP+ T++++ L G + D +E F +
Sbjct: 406 NCGMLDK-------AMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQ 458
Query: 446 VIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
+ ++ YH I+ +G EL+ + +G+ D
Sbjct: 459 GVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLD 498
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 132/317 (41%), Gaps = 42/317 (13%)
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+ TY ++++ + R DKA + R+M G+ + TYN+++ YS TGQ+++ V
Sbjct: 254 FVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313
Query: 191 EMK--------------------------AKNIF---------PDNFSYRICINSYGARS 215
EM+ A+++F PD FSY I +N Y +
Sbjct: 314 EMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 373
Query: 216 DLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
L M + M I T+ Y ++DKA + + + + + + Y
Sbjct: 374 CLVDMTDLFDLMLGD-GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTY 432
Query: 276 NFLISLYASLGNKSEVLRLWDL---EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
+I+ +G + + ++ + A +Y Y +++ G +A++++ E
Sbjct: 433 TTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA---YHCLIQGFCTHGSLLKAKELISE 489
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
+G D + +++I C G V +A+ I + V G T ++++ GY GK
Sbjct: 490 IMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGK 549
Query: 393 TERGFQCMKAALSVYVE 409
E+ + A +S +E
Sbjct: 550 MEKALRVFDAMVSAGIE 566
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 150/357 (42%), Gaps = 15/357 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+ Y DKA+ F +M++ G+ + LTY ++ + G+ + + +M
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQM 455
Query: 193 KAKNIFPDNFSYRICINSYGAR-SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
+ + PD ++Y I + S L+ E+I M + H LD ++S + K
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH--LDIVLFSSIINNLCKLG 513
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+ A ++ + Y+ L+ Y +G + LR++D +A + Y
Sbjct: 514 RVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYG 573
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T++ K+G +E + +E G T + N +I G G A+ ++ E
Sbjct: 574 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 633
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKLGD 429
G A ++++V G F +C A+ ++ E + +IT ++++ +
Sbjct: 634 GIAMNKCTYSIVLRGLFKN-------RCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 686
Query: 430 EGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
V++ + A++ R+ + Y I I+ G + +++ SM+ G + D
Sbjct: 687 TRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 126/305 (41%), Gaps = 6/305 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +++ + ++ +KA F++M + GI +TY+ ++ K +K L +M
Sbjct: 221 AYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQM 280
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P+N++Y I Y + + + +EM Q I+ D T+ K
Sbjct: 281 VNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQ-SILPDVVTFNMLMGSLCKYGK 339
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
I +A DV + + D YN +++ YA+ G ++ L+DL + +
Sbjct: 340 IKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNV 399
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++A G ++A + E G + VI C G + +A ++++G
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQG 459
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
A ++ + G+ G + + + ++ G D + +SI++ L G
Sbjct: 460 VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN-----NGMHLDIVLFSSIINNLCKLGR 514
Query: 433 VQDVE 437
V D +
Sbjct: 515 VMDAQ 519
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 7/223 (3%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T Y L++ Y + +KAL F M GI + + Y ++ Y K G+ ++ +
Sbjct: 533 TAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLF 592
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM K I P Y I I+ ++ EM ++ I ++ TY+ K
Sbjct: 593 REMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM-TESGIAMNKCTYSIVLRGLFK 651
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
D+A + K+ + D I N +I A + V DL + + +
Sbjct: 652 NRCFDEAIFLFKELRAMNVKIDIITLNTMI---AGMFQTRRVEEAKDLFASISRSGLVPC 708
Query: 310 YIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+T M+ L+K G EEAE + + +G D+R+ N V+
Sbjct: 709 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 152/377 (40%), Gaps = 13/377 (3%)
Query: 116 SAESYFSNLKDDEKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
+A+ +F K+ + YG ++ + + D+A + R+M+E GI Y+ +M
Sbjct: 372 AADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMM 431
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPH 232
Y+ G EK V +K FP SY IN Y + + +EI +M
Sbjct: 432 DGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEI--SKMMKMSG 489
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
I + TY+ + ++K A V + + + D + YN +I+ + +GN +
Sbjct: 490 IKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAI 549
Query: 293 RLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
+ + R R ++ ++ + GE A ++ SG NA+I+G
Sbjct: 550 CMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGL 609
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
+ A AIL+++ G +++ + GY G TE+ FQ + +G
Sbjct: 610 VEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYF-----TVLRNEG 664
Query: 413 WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVD 469
+ D ++L G +Q A + IP N +Y+ I R G
Sbjct: 665 LEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAA 724
Query: 470 ELLDSMKADGIDEDEET 486
+L+ M+ +G+ D T
Sbjct: 725 DLMQQMRKEGLLPDIHT 741
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 150/356 (42%), Gaps = 12/356 (3%)
Query: 53 WVKNGNKVRVGELQRIIRDLR--KRKRFSQALEVSDWMNRKGICVF------APCDHAVQ 104
W++ GN GE + R RK F + LE + + F A ++ +
Sbjct: 232 WLQ-GNGGDKGEYPSTWHEERDGSRKSFQKILETQPENWQAVVTAFERIKKPARKEYGLM 290
Query: 105 LDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+ GR A F +++ E + Y +L++ Y R ++AL RKMKE GI
Sbjct: 291 VKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGI 350
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
++ +TY+ I+ ++K G + E K K + Y I ++ +++ E
Sbjct: 351 EMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEA 410
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
++REME Q I Y + Y +K V + +E I Y LI+LY
Sbjct: 411 LVREMEEQ-GIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLY 469
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
+G S+ L + + K + ++ + Y ++ +KL + A V +++ G D
Sbjct: 470 TKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDV 529
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ N +I +C G + A ++ + ++ T ++ + G+ AG+ R +
Sbjct: 530 VLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALE 585
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 14/241 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHG-------FLSAESY 120
II + +ALE+ D M R G C+ P H ++G V + E
Sbjct: 570 IIHGFARAGEMRRALEIFDMMRRSG-CI--PTVHTYNALILGLVEKRQMTKAVAILDEMN 626
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+ + +E TY T L+ Y T+KA +F ++ G+ + TY ++ K+G
Sbjct: 627 VAGVGPNEHTYTT---LMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSG 683
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ + V EM AKNI + F Y I I+ + R D+ ++++M + ++ D TY
Sbjct: 684 RMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKE-GLLPDIHTY 742
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
S + KA + KA++++++ E + + Y LI+ +A + L ++ K
Sbjct: 743 TSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKL 802
Query: 301 A 301
A
Sbjct: 803 A 803
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 12/154 (7%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TY + +N + KA ++M+ GI + TY ++ +++ EK E
Sbjct: 740 HTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEE 799
Query: 192 MKAKNIFPDNFSYRICINSYGARSDL------EGMEIILREM-ESQPHIVLDWSTYASAA 244
MK PD Y + S +R+ G+ + REM ES+ +++D T A
Sbjct: 800 MKLAGFKPDKAVYHCLVTSLLSRATFAQSYVYSGLLSVCREMIESE--MIVDMGT---AV 854
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
H+ I++ L +A ++ D +N L
Sbjct: 855 HWSRCLRKIERTGGELTEALQKTFPPDWTSHNVL 888
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 160/367 (43%), Gaps = 17/367 (4%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
++ ALL+ + + D + F+ M GI S TYN ++ K G E + T+
Sbjct: 221 RSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQ 280
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYI 248
MK PD +Y I+ +G L+ I +M + P ++ TY + + +
Sbjct: 281 MKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVI----TYNALINCFC 336
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYIN 307
K + KA + L + + + + + Y+ I + G E ++ + D+ + A
Sbjct: 337 KFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN-E 395
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y ++++A K G EA K+++E +G + A++ G C G ++ AE +
Sbjct: 396 FTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRA 455
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
++ G A ++ + G+ A + E +K ++ K KPD + +IL L
Sbjct: 456 MLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKE-----MKEKCIKPDLLLYGTILWGL 510
Query: 428 GDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGKGVDE--LLDSMKADGIDEDE 484
+E +++ + + ++ + I N +Y + A ++G+ + LL+ M G+ E
Sbjct: 511 CNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATE 570
Query: 485 ETKEILV 491
T L+
Sbjct: 571 VTYCALI 577
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 168/405 (41%), Gaps = 60/405 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+NC+ + + KA +MK G+ + +TY+ + + K G ++ +M
Sbjct: 327 TYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM 386
Query: 193 KAKNIFPDNFSYRICINSYGARSDL-EGMEII---------------------------L 224
+ + P+ F+Y I++ +L E ++++ +
Sbjct: 387 RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRM 446
Query: 225 REMESQPHIVL------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+E E +L + TY + H +IKA ++ A D+LK+ +E+ + D + Y
Sbjct: 447 KEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYG-- 504
Query: 279 ISLYASLGNKSEV----LRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLK 331
++ L N+S + L + +++++ IN + Y T+++A K G+ EA +L+
Sbjct: 505 -TILWGLCNESRLEEAKLLIGEIKESG----INTNAVIYTTLMDAYFKSGQATEALTLLE 559
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
E G A+I G C +GLVQ A + E G PN V D
Sbjct: 560 EMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIG--LQPN--VAVYTALVDGL 615
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV---IP 448
F+ K ++ KG PD T+++ G++Q EA R + +
Sbjct: 616 CKNNCFEVAKKLFDEMLD-KGMMPDKIAYTALIDGNMKHGNLQ--EALNLRDRMIEIGME 672
Query: 449 MNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
++ Y A I +G + LLD M G+ DE L+
Sbjct: 673 LDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLI 717
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 1/165 (0%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY AL++ + +A+ HF +M E+G+ + Y ++ K +E +
Sbjct: 569 TEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLF 628
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM K + PD +Y I+ +L+ + LR+ + + LD Y +
Sbjct: 629 DEMLDKGMMPDKIAYTALIDGNMKHGNLQE-ALNLRDRMIEIGMELDLHAYTALIWGLSH 687
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
+ + KA ++L + + D + Y LI Y +LG E L L
Sbjct: 688 SGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALEL 732
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 114/276 (41%), Gaps = 19/276 (6%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY AL++ +++ ++ + A ++MKE I L Y I+ + E+ ++ E
Sbjct: 466 ETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGE 525
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
+K I + Y +++Y +L EM I + TY + K+
Sbjct: 526 IKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATE-VTYCALIDGLCKSG 584
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASL------GNKSEVL-RLWD--LEKTAC 302
L+ +A + E IG +++Y +L N EV +L+D L+K
Sbjct: 585 LVQEAMHHFGRMSE-------IGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMM 637
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
I Y +++ MK G +EA + G D A+I G ++G VQ A
Sbjct: 638 PDKIA--YTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKAR 695
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+L++++ KG + + Y+ GK + +
Sbjct: 696 NLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALE 731
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 171/416 (41%), Gaps = 34/416 (8%)
Query: 29 KTTLYSIISPLGNPGTRIEPEL-----DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALE 83
+ T+YS+ L R + E+ D G K V I KR E
Sbjct: 222 EVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAE 281
Query: 84 VSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLS------AESYFSNLKDD--EKTYQTYG 135
+ M ++G+ C+ V L+ +HGF + A+ F +++ E Y
Sbjct: 282 ILTLMEKEGV----ACN-VVTYTLL--IHGFSNIGKIEEAQRLFEEMREKGIEADVYVYT 334
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
++++C R +AL F +M + G+ S TY ++ K GQ E ++ EM+ K
Sbjct: 335 SIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGK 394
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
I + + I+ Y S + + L+ + + + D Y S A K N D+
Sbjct: 395 GIDLNPVIFNTLIDGY-CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDE 453
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDYITM 313
A +L ER + + + LI +Y GN E R++ EK I Y +
Sbjct: 454 AKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIIT--YNVL 511
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
++ K G +EA K+ E E G D ++I G C +G V A + +++ ++G
Sbjct: 512 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 571
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKL 427
++ + +G G++E F+ +Y E K G PD V +S++ L
Sbjct: 572 VPNVVTYTAMISGLSKDGRSEEAFK-------LYDEMKETGLTPDDTVYSSLVGSL 620
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 148/357 (41%), Gaps = 24/357 (6%)
Query: 105 LDLIGRVHG----FLSAESYFSNLKD-----DEKTYQTYGALLNCYVRQRQTDKALSHFR 155
DL+ RV+ F A F +++ DE++ Y L R Q D L FR
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALR---RGGQVDSCLRFFR 214
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARS 215
+M + + ++ + ++ K G E ++ E+ AK + + +Y I Y R
Sbjct: 215 RMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRL 274
Query: 216 DLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
DL G+ IL ME + + + TY H + I++A + ++ E+ + D Y
Sbjct: 275 DLGGVAEILTLMEKEG-VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVY 333
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
+IS GN L L+D Y ++ + K G+ E A+ ++ E +
Sbjct: 334 TSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQG 393
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G + I N +I GYC +G+V A + + +KG + ++ +A+G + +
Sbjct: 394 KGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDE 453
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ 452
K L VE +G P+ T+++ EG+ FV A R M +
Sbjct: 454 A----KGLLFSMVE-RGVSPNTMSFTTLIDIYCKEGN------FVEAKRVFREMEEK 499
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 184/463 (39%), Gaps = 55/463 (11%)
Query: 76 KRFSQALEVSDWMNRKGICV--FAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT 133
K F +ALE + M +KG + + + + L G+V L NL D E T +
Sbjct: 169 KMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNL-DVEVTVYS 227
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYN----------------DIMCL-- 175
+L+ ++ + ++ G+ + +TYN +I+ L
Sbjct: 228 LTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLME 287
Query: 176 -----------------YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
+S G+ E+ + EM+ K I D + Y I+ +++
Sbjct: 288 KEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 347
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
++ EM + ++ TY + H KA ++ A ++ + + + + + +N L
Sbjct: 348 RALVLFDEM-TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTL 406
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWEL 335
I Y G E LRL + + K+ + D Y ++ L KL +EA+ +L
Sbjct: 407 IDGYCESGMVDEALRLQVVME---KKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVE 463
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G S +T +I YC G A+ + ++ EKG ++ V+ GY ++R
Sbjct: 464 RGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGY-----SKR 518
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQM 453
G L +E +G PD TS++ +G V + R ++P N
Sbjct: 519 GNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVP-NVVT 577
Query: 454 YHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILVCTM 494
Y A I ++G+ + +L D MK G+ D+ LV ++
Sbjct: 578 YTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 114/241 (47%), Gaps = 3/241 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +LL+ + + A +M I TYN + K GQ + V EM
Sbjct: 321 TYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEM 380
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+K ++P+ +Y ++ Y + LE + EM+ + + LD +Y + Y K
Sbjct: 381 SSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRS-VCLDRVSYNTLVGIYEKLGN 439
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR-DYI 311
+D+A + K+ E +D + YN L+S Y G EV RL++ E A Y N Y
Sbjct: 440 LDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFE-EMKARNIYPNTLTYS 498
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
TM++ K +EA V +E++++ D +A+I C NGL++++ +L ++EK
Sbjct: 499 TMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEK 558
Query: 372 G 372
G
Sbjct: 559 G 559
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 4/251 (1%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG-QYEKVPDV 188
T ++ A+++ + R + A+ FR M G+ + +TYN I+ +K ++ V
Sbjct: 247 TVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGAKGEVSFDVVVKF 306
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
EM A + PD +Y ++ ++ E + +L EM+ + IV D TY +
Sbjct: 307 YDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRC-IVPDVFTYNTYLDTLC 365
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
KA ID A V ++ + + + Y+ ++ YA + L L++ K
Sbjct: 366 KAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRV 425
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y T++ KLG +EA + KE E SG + D NA++ GY +G+ + E++
Sbjct: 426 SYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEM 485
Query: 369 VEKGKATTPNS 379
K + PN+
Sbjct: 486 --KARNIYPNT 494
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 27/220 (12%)
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
A Q+DL RV +S++ + N+ TY A+++ Y + + AL+ + +MK
Sbjct: 367 AGQIDLARRVFEEMSSKRVWPNV-------VTYSAMMDGYAKANLLEDALNLYEEMKLRS 419
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
+ L ++YN ++ +Y K G ++ + EM+ I D +Y ++ YG + +
Sbjct: 420 VCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVR 479
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
+ EM+++ +I + TY++ Y K + +A DV ++ + + D + Y+ +I
Sbjct: 480 RLFEEMKAR-NIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIID- 537
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLG 321
T CK + I +L A+M+ G
Sbjct: 538 ------------------TLCKNGLMESSIMLLMAMMEKG 559
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y L+ Y + D+A+ ++M+ GI +TYN ++ Y K G Y++V + EM
Sbjct: 426 SYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEM 485
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
KA+NI+P+ +Y I+ Y + + RE + + +D Y++ K L
Sbjct: 486 KARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFK-MARLEIDVVFYSAIIDTLCKNGL 544
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLI 279
++ + +L E+ + + + +N +I
Sbjct: 545 MESSIMLLMAMMEKGIKPNVVTFNSII 571
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 158/411 (38%), Gaps = 54/411 (13%)
Query: 95 VFAPCDHAVQLDLIGR----------VHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQ 144
+ PC V L L+ +H F + F T +++ LLN +V
Sbjct: 71 IHCPCPEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGC----SPTIRSFNTLLNAFVES 126
Query: 145 RQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSY 204
Q +A + F+ + ++ + TYN +M + K G++EK +LT M + PD +Y
Sbjct: 127 HQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITY 186
Query: 205 RICINSYGARSDLE-GMEII--LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK 261
I DL +E+ +RE +P +V Y + K KA ++ +
Sbjct: 187 GTLIGGVAKSGDLGFALEVFDEMRERGVEPDVV----CYNMIIDGFFKRGDFVKAGEMWE 242
Query: 262 K-AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKL 320
+ E L + YN +IS G SE L +W+ K ++ Y ++ L +
Sbjct: 243 RLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEA 302
Query: 321 GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN-- 378
G+ A KV +E G D NA++ G C G N E E E GK + N
Sbjct: 303 GDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAG---NVEECFELWEEMGKCSLRNVR 359
Query: 379 SWAVVAAGYFDAGKTERG-------FQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
S+ + G F+ GK + + A V V G W +L +
Sbjct: 360 SYNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHRE 419
Query: 432 SVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDE 482
DV+ F Y + I A + G+ +DE ADG+ E
Sbjct: 420 GGMDVDEFA-------------YSSLINALCKEGR-LDE------ADGVVE 450
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 107/255 (41%), Gaps = 10/255 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +L+N ++ + D+A M + G ++ N ++ + K + + V EM
Sbjct: 428 AYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREM 487
Query: 193 KAKNIFPDNFSYRICINS-YGARSDLEGMEIILREMES--QPHIVLDWSTYASAAHFYIK 249
K SY I IN A E + + +E +P I+ TY++ +
Sbjct: 488 SGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDII----TYSTLIGGLYE 543
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINR 308
+N++D A + + + + D I YN +I S G + L+L+ L + C +
Sbjct: 544 SNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCVNLVTH 603
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
+ T++E K+G E A K+ D N + G C+ G V +A L+D
Sbjct: 604 N--TIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDA 661
Query: 369 VEKGKATTPNSWAVV 383
+ +G T +W ++
Sbjct: 662 LVRGFLPTAITWNIL 676
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 80/416 (19%), Positives = 147/416 (35%), Gaps = 111/416 (26%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG L+ + AL F +M+E G+ + YN I+ + K G + K ++ +
Sbjct: 185 TYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERL 244
Query: 193 -KAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+ + +FP SY + I+ EG+EI R +++ D TY++ H +A
Sbjct: 245 LREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKC--DLFTYSALIHGLSEA 302
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV------------------- 291
+ A V ++ R + D + N +++ GN E
Sbjct: 303 GDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYN 362
Query: 292 ---------------LRLWD-------------LEKTACKRYINRD-------------- 309
+ LWD + Y+NR
Sbjct: 363 IFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGM 422
Query: 310 ------YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
Y +++ AL K G +EA+ V++ G +++ + N +I G+ + + +A
Sbjct: 423 DVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVK 482
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD------- 416
+ ++ KG + T S+ ++ G A + + C+ L KGWKPD
Sbjct: 483 VFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLE-----KGWKPDIITYSTL 537
Query: 417 --------------------------PKVITS--ILSKLGDEGSVQDVEAFVAALR 444
P +I ++ +L G V+D + LR
Sbjct: 538 IGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLR 593
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 149/344 (43%), Gaps = 18/344 (5%)
Query: 97 APCDHAVQLDLI---GRVHGFLSAESYFSNLKD---DEKTYQTYGALLNCYVRQRQTDKA 150
PC V L +I + A F N++D + ++Y LLN +V + D+A
Sbjct: 76 CPCKEDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRA 135
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
S R + M ++ + TYN ++ + K Q EK +L M ++N+ PD FSY IN
Sbjct: 136 ESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLING 195
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK-AEERLEQ 269
DL G + EM S +V D + Y + K DK ++ ++ ++
Sbjct: 196 MVKVGDLLGALKVFDEM-SVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVY 254
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
+ + YN +I+ G E L +W+ + Y +++ L + G + A +V
Sbjct: 255 PNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRV 314
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
KE S D NA++ G+C G ++ + L ++ K T S+ ++ G F+
Sbjct: 315 YKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFE-LWMVMGKENCQTVVSYNILIKGLFE 373
Query: 390 AGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSILSKLGDEG 431
GK E A+S++ + KG +P+ ++ L G
Sbjct: 374 NGKVEE-------AISIWELLCKKGCRPESTTYGVLIHGLCKNG 410
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 111/257 (43%), Gaps = 11/257 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y ++++ ++ + D+A+S +M + G L N ++ + + + E + EM
Sbjct: 433 AYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREM 492
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+ K P SY I ++EM E +P ++ T + +
Sbjct: 493 ECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMI----TCSLLMDGLCQ 548
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTAC-KRYIN 307
I+ A ++ ++A ++ + D YN L+ S+ + L+L+ ++++ C +
Sbjct: 549 EKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVT 608
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
R+ T++E L K+ ++E+A ++ G D N I G C+ + +A L D
Sbjct: 609 RN--TLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLND 666
Query: 368 LVEKGKATTPNSWAVVA 384
+ +G T +W ++
Sbjct: 667 ALNRGILPTAVTWNILV 683
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 153/358 (42%), Gaps = 17/358 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+G+ L Y + R+ D A +M+E G L+T+TYN ++ ++G E+ +M+
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIKA 250
+ PD F+Y IN + +L EM E +P++V+ YA+ +++
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVV----YANLIDGFMRE 340
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
D+A ++K+ Q + I Y+ L+ +G L R Y
Sbjct: 341 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 400
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++E + ++A ++L E E +G S + + +I G C +G + A +LE++
Sbjct: 401 NLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 460
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
KG +A + +GY G + V V PD S++ L
Sbjct: 461 KGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV-----LPDLYCYNSLIFGLSKV 515
Query: 431 GSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDE 484
G V++ + A + R ++P N Y I ++NG + ++L+ M G+ ++
Sbjct: 516 GRVEESTKYFAQMQERGLLP-NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 572
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 125/304 (41%), Gaps = 17/304 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y L++ Y R+ A F KM ++ + YN ++ SK G+ E+ +M
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ + + P+ F+Y I+ Y DLE E +++ M +P+ V+ Y Y K
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI----YIDLLESYFK 584
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTACKRYINR 308
++ I+K S K ++ D Y LI +S GN R L +EK ++
Sbjct: 585 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV 644
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y +++ L K + E+A +L E G + NA+I G C +G + A + +
Sbjct: 645 -YSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 703
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP---KVITSILS 425
+ KG ++ + G G F L+ G PD V+T+ S
Sbjct: 704 LAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT-----GITPDAFVYSVLTTGCS 758
Query: 426 KLGD 429
GD
Sbjct: 759 SAGD 762
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 169/398 (42%), Gaps = 62/398 (15%)
Query: 133 TYGALLNCYVRQRQTDKALS--------------------------------HFRKMKEM 160
TYGAL+N + R++++A + F+ +KEM
Sbjct: 294 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 353
Query: 161 ---GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL 217
G+ + +TY++++ K GQ ++ +L +M + PD +Y + I +
Sbjct: 354 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSK 413
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
+ +L EME+ I + TY+ H ++ +KASD+L++ + + + Y
Sbjct: 414 KDAFRLLSEMENA-GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 472
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWE 334
LIS Y GN S ++D K + D Y +++ L K+G EE+ K + +
Sbjct: 473 LISGYCREGNVSLACEIFD---KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ 529
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G + + +I GY NG +++AE +++ +++ G + + YF + E
Sbjct: 530 ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIE 589
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV--IPMNRQ 452
+ K+ L +G D ++ ++ L G+++ AA R + I N
Sbjct: 590 KVSSTFKSMLD-----QGVMLDNRIYGILIHNLSSSGNME------AAFRVLSGIEKNGS 638
Query: 453 MYHAFIKANIRNG--KGVDE-----LLDSMKADGIDED 483
+ + +++ +G K D +LD M G+D +
Sbjct: 639 VPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPN 676
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/361 (20%), Positives = 144/361 (39%), Gaps = 9/361 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++ + R A +M+ GI+ + TY+ ++ ++G+ EK D+L EM
Sbjct: 399 TYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM 458
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P+ F Y I+ Y ++ I +M ++ +++ D Y S K
Sbjct: 459 TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM-TKVNVLPDLYCYNSLIFGLSKVGR 517
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+++++ + +ER + Y+ LI Y G+ +L + + YI
Sbjct: 518 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 577
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+LE+ K + E+ K G D RI +I ++G ++ A +L + + G
Sbjct: 578 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 637
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
+ ++ + +G E+ F + + KG P+ +++ L G
Sbjct: 638 SVPDVHVYSSLISGLCKTADREKAFGILDE-----MSKKGVDPNIVCYNALIDGLCKSGD 692
Query: 433 VQDVE-AFVAALRTVIPMNRQMYHAFIKANIRNGKGVDE--LLDSMKADGIDEDEETKEI 489
+ F + L + N Y + I + + G + L + M A GI D +
Sbjct: 693 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 752
Query: 490 L 490
L
Sbjct: 753 L 753
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 122/300 (40%), Gaps = 26/300 (8%)
Query: 109 GRVHGFL------SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEM 160
G +HG+L SAE + D + Y LL Y + +K S F+ M +
Sbjct: 542 GLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQ 601
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGM 220
G+ L Y ++ S +G E VL+ ++ PD Y I+ +D E
Sbjct: 602 GVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKA 661
Query: 221 EIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
IL EM + P+IV Y + K+ I A +V + + + Y
Sbjct: 662 FGILDEMSKKGVDPNIV----CYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 717
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWE 334
LI +G+ S L++ E A I D Y + G+ E+A +++E
Sbjct: 718 LIDGSCKVGDISNAFYLYN-EMLATG--ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 774
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV--VAAGYFDAGK 392
L G++ + N ++ G+C G +Q +L V G+ PN+ + + +G +AGK
Sbjct: 775 LRGHASISSF-NNLVDGFCKRGKMQETLKLLH--VIMGRGLVPNALTIENIISGLSEAGK 831
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 170/416 (40%), Gaps = 34/416 (8%)
Query: 29 KTTLYSIISPLGNPGTRIEPEL-----DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALE 83
+ T+YS+ L R + E+ D G K V I KR E
Sbjct: 226 EVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAE 285
Query: 84 VSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLS------AESYFSNLKDD--EKTYQTYG 135
+ M ++G+ + V L+ +HGF + A+ F +++ E Y
Sbjct: 286 ILTLMEKEGVAC-----NVVTYTLL--IHGFSNIGKIEEAQRLFEEMREKGIEADVYVYT 338
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
++++C R +AL F +M + G+ S TY ++ K GQ E ++ EM+ K
Sbjct: 339 SIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGK 398
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
I + + I+ Y S + + L+ + + + D Y S A K N D+
Sbjct: 399 GIDLNPVIFNTLIDGY-CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDE 457
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDYITM 313
A +L ER + + + LI +Y GN E R++ EK I Y +
Sbjct: 458 AKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIIT--YNVL 515
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
++ K G +EA K+ E E G D ++I G C +G V A + +++ ++G
Sbjct: 516 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 575
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKL 427
++ + +G G++E F+ +Y E K G PD V +S++ L
Sbjct: 576 VPNVVTYTAMISGLSKDGRSEEAFK-------LYDEMKETGLTPDDTVYSSLVGSL 624
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 148/357 (41%), Gaps = 24/357 (6%)
Query: 105 LDLIGRVHG----FLSAESYFSNLKD-----DEKTYQTYGALLNCYVRQRQTDKALSHFR 155
DL+ RV+ F A F +++ DE++ Y L R Q D L FR
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALR---RGGQVDSCLRFFR 218
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARS 215
+M + + ++ + ++ K G E ++ E+ AK + + +Y I Y R
Sbjct: 219 RMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRL 278
Query: 216 DLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
DL G+ IL ME + + + TY H + I++A + ++ E+ + D Y
Sbjct: 279 DLGGVAEILTLMEKEG-VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVY 337
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
+IS GN L L+D Y ++ + K G+ E A+ ++ E +
Sbjct: 338 TSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQG 397
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G + I N +I GYC +G+V A + + +KG + ++ +A+G + +
Sbjct: 398 KGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDE 457
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ 452
K L VE +G P+ T+++ EG+ FV A R M +
Sbjct: 458 A----KGLLFSMVE-RGVSPNTMSFTTLIDIYCKEGN------FVEAKRVFREMEEK 503
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 184/463 (39%), Gaps = 55/463 (11%)
Query: 76 KRFSQALEVSDWMNRKGICV--FAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT 133
K F +ALE + M +KG + + + + L G+V L NL D E T +
Sbjct: 173 KMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNL-DVEVTVYS 231
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYN----------------DIMCL-- 175
+L+ ++ + ++ G+ + +TYN +I+ L
Sbjct: 232 LTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLME 291
Query: 176 -----------------YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
+S G+ E+ + EM+ K I D + Y I+ +++
Sbjct: 292 KEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 351
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
++ EM + ++ TY + H KA ++ A ++ + + + + + +N L
Sbjct: 352 RALVLFDEM-TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTL 410
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWEL 335
I Y G E LRL + + K+ + D Y ++ L KL +EA+ +L
Sbjct: 411 IDGYCESGMVDEALRLQVVME---KKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVE 467
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G S +T +I YC G A+ + ++ EKG ++ V+ GY ++R
Sbjct: 468 RGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGY-----SKR 522
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQM 453
G L +E +G PD TS++ +G V + R ++P N
Sbjct: 523 GNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVP-NVVT 581
Query: 454 YHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILVCTM 494
Y A I ++G+ + +L D MK G+ D+ LV ++
Sbjct: 582 YTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 162/393 (41%), Gaps = 38/393 (9%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++N + T AL +KM+E G + + YN I+ K + D +EM
Sbjct: 47 TYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEM 106
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ I PD F+Y ++ + + + ++M + +++ + T+ K +
Sbjct: 107 VKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVER-NVIPNKVTFTILIDGLCKKRM 165
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYI 311
I +A V + E+ + D YN L+ Y S E +L++ +++ C + R Y
Sbjct: 166 ISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNV-RSYN 224
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++ K G +EA+ +L E + D + ++ G+C G Q A+ +L+++
Sbjct: 225 ILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSY 284
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAA-----------LSVYVEG---------- 410
G ++++V G G + F+ +KA ++ +EG
Sbjct: 285 GLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAA 344
Query: 411 ---------KGWKPDPKVITSILSKLGDEG-SVQDVEAFV-AALRTVIPMNRQMYHAFIK 459
KG +P T ++S L G S + E F A+ +P N Y+ I+
Sbjct: 345 RELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLP-NSCTYNVIIQ 403
Query: 460 ANIRNGKGVD--ELLDSMKADGIDEDEETKEIL 490
+RNG + L++ M G D T +L
Sbjct: 404 GFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K E TY AL++ Y + Q D+A F M G A + +YN ++ + K+G+ ++
Sbjct: 179 KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDE 238
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
+L EM K++ PD F+Y + + + + +L+EM S ++ + TY+
Sbjct: 239 AKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSY-GLLPNLITYSIVL 297
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K +D+A ++LK +E + + Y LI + G L+ +
Sbjct: 298 DGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQ 357
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y M+ L+K G EA ++ +E ++G ++ N +I G+ NG NA +
Sbjct: 358 PTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRL 417
Query: 365 LEDLVEKGKATTPNSWAVVA 384
+E++V KG + +++ +++
Sbjct: 418 IEEMVGKGFSADSSTFRMLS 437
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 157/371 (42%), Gaps = 17/371 (4%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+ T T+ LL+ + + A+ F +M +MG +TY+ I+ K G
Sbjct: 7 QPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQ 66
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGA-RSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
+L +M+ K P+ +Y I+S R E M+ EM + I D TY+S H
Sbjct: 67 LLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMD-FFSEMVKE-GIPPDVFTYSSILHG 124
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
+ +++A+ + K+ ER + + + LI L K + W + +T ++ +
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILID---GLCKKRMISEAWLVFETMTEKGL 181
Query: 307 NRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
D Y +++ + +EA+K+ + G + + R N +I G+C +G + A+
Sbjct: 182 EPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKG 241
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
+L ++ K +++ + G+ G+ + + +K S G P+ + +
Sbjct: 242 LLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSY-----GLLPNLITYSIV 296
Query: 424 LSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGI 480
L L G + + + A++ + I N +Y I+ GK EL ++ GI
Sbjct: 297 LDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGI 356
Query: 481 DEDEETKEILV 491
T +++
Sbjct: 357 QPTVVTYTVMI 367
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 155/391 (39%), Gaps = 47/391 (12%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT---------- 179
T Y +L++ +V+ T KAL+ +R M + G+ T T+N +M + K
Sbjct: 88 TASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLF 147
Query: 180 -------------------------GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR 214
G EK V +MK++ P+ F+Y I+ G
Sbjct: 148 EEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKS 207
Query: 215 SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
++ + EM S+ +V Y S H ++ D A+ + ++ + Q D +
Sbjct: 208 GHVDKAFFLFEEMTSE-GLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVT 266
Query: 275 YNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEW 333
+ L+ G SE R++ + C +N Y +++ L K +EA ++ E
Sbjct: 267 FTSLVYGLGVAGRASEARRIFQEARDVGCALDVNL-YNVLIDTLCKSKRLDEAWEIFGEL 325
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
E G D NA++ G C +G + +A +L D+ G + + G +G+
Sbjct: 326 EEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRV 385
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQM 453
E Q L + ++ G++PD +++ + G ++D + N
Sbjct: 386 EEAGQ-----LLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVT 440
Query: 454 YHAFIKANIRNGKGVDE---LLDSMKADGID 481
Y+ + G+ VDE L + MK + +D
Sbjct: 441 YNTILNGLCMAGR-VDEAYKLFNGMKQETVD 470
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/353 (18%), Positives = 143/353 (40%), Gaps = 21/353 (5%)
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
+K++ ++M+ AL+ YN ++ + K G +K V M + PD +++ +
Sbjct: 71 EKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVL 130
Query: 208 INSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE 264
+N++ ++ + + EM++Q P+++ TY+ K ++KA V +
Sbjct: 131 MNAFKKAKRVDSVWKLFEEMQNQNCSPNVI----TYSILIDAVCKCGGVEKALKVFLDMK 186
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLWD---LEKTACKRYINRDYITMLEALMKLG 321
R + + Y +I G+ + L++ E R + Y +++ L + G
Sbjct: 187 SRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVV---YNSLIHGLGRSG 243
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+ A K+ +E G D +++ G G A I ++ + G A N +
Sbjct: 244 RADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYN 303
Query: 382 VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
V+ + + + ++ +E G PD +++ L G + D +
Sbjct: 304 VLIDTLCKSKRLDEAWEIFGE-----LEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLG 358
Query: 442 AL-RTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETKEILV 491
+ R + +Y+ I ++G+ +LL M++ G + D T L+
Sbjct: 359 DMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 157/383 (40%), Gaps = 32/383 (8%)
Query: 72 LRKRKRFSQALEVSDWMNRKGI--------CVFAPCDHAVQLDLIGRVHGFLSAESYFSN 123
L K K A V M R+GI CV A +L RV + N
Sbjct: 206 LSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPN 265
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
L T + V+ + +KAL +M+ GI +TYN ++ Y + E
Sbjct: 266 LSICNTT-------IYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIE 318
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+++ + +K PD SY + +E ++ ++ +M +++ D TY +
Sbjct: 319 DALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTL 378
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTAC 302
H K D A LK+AE++ D +GY+ ++ + G E L D+ +C
Sbjct: 379 IHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSC 438
Query: 303 KRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
N D +T +++ +LG +EA+K+L++ G +T A++ G C++G
Sbjct: 439 ----NPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSL 494
Query: 360 NAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP 417
A ++ V + TPN ++ VV G+ GK + + KG+ P P
Sbjct: 495 EAREMIN--VSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVE-----KGFFPTP 547
Query: 418 KVITSILSKLGDEGSVQDVEAFV 440
I ++ L V + + ++
Sbjct: 548 VEINLLIQSLCQNQKVVEAKKYL 570
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/383 (17%), Positives = 157/383 (40%), Gaps = 53/383 (13%)
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
SNL D+ TY T L++ + D AL+ ++ ++ G + + Y+ I+ + + G+
Sbjct: 366 SNLIPDQVTYNT---LIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGR 422
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWS 238
++ ++ +M +++ PD +Y ++ + ++ + +L++M +P+ V
Sbjct: 423 MDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTV---- 478
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-- 296
+Y + + + +A +++ +EE + I Y ++ + G SE L
Sbjct: 479 SYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREM 538
Query: 297 --------------LEKTAC--------KRYINR-----------DYITMLEALMKLGEH 323
L ++ C K+Y+ ++ T++ ++G+
Sbjct: 539 VEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDM 598
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
E A VL++ LS D A+ G + A ++ ++ KG TP ++ V
Sbjct: 599 EAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSV 658
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA-A 442
Y G+ + + + KP + ++ KL D G++++ E +
Sbjct: 659 IHRYCQWGRVDDMLNLLDRMVK-------RKPFRTIYNHVIEKLCDFGNLEEAEKLLGKV 711
Query: 443 LRTVIPMNRQMYHAFIKANIRNG 465
LRT ++ H +++ ++ G
Sbjct: 712 LRTASKLDANTCHVLMESCLKKG 734
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 120/304 (39%), Gaps = 15/304 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y LL+ + + A R M GI LS + +M YS+ G+ VLT M
Sbjct: 198 VYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLM 257
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ--PHIVLDWSTYASAAHFYIKA 250
+ + P N S IC + +E LR +E I D TY S Y
Sbjct: 258 QKAGVEP-NLS--ICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDL 314
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD- 309
N I+ A +++ + D + Y ++ +V L +EK + D
Sbjct: 315 NRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCL--MEKMVQDSNLIPDQ 372
Query: 310 --YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T++ L K G ++A LKE E G D +A++ +C G + A++++ D
Sbjct: 373 VTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVID 432
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ + ++ + G+ G+ + + ++ G KP+ T++L+ L
Sbjct: 433 MYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYK-----HGCKPNTVSYTALLNGL 487
Query: 428 GDEG 431
G
Sbjct: 488 CHSG 491
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 134/314 (42%), Gaps = 9/314 (2%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E TY AL+ R+ ++AL M++ G+ + TY + K + ++ +
Sbjct: 390 EPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKE 449
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHF 246
+ E A+ + P+ +Y +N Y S L E M+I L+EM Q D TY +
Sbjct: 450 MFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDI-LKEMH-QNDCTPDHVTYTTLIQG 507
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
++ N + A + + E + + N L A +GN + + K Y
Sbjct: 508 LVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYS 567
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
DY + L GE EEA+ +L E G S + N +I G+C G + +A+A+L
Sbjct: 568 ASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLN 627
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
++E G S+ ++ + + G+T+ Q AL +G +PK + +
Sbjct: 628 FMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALE-----RGVVLNPKPVIQEPDE 682
Query: 427 LGDEGSVQDVEAFV 440
L EG V+ E V
Sbjct: 683 L-PEGLVRSQEELV 695
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/425 (19%), Positives = 172/425 (40%), Gaps = 25/425 (5%)
Query: 28 NKTTLYSIISPLGNPG--TRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVS 85
N +++I LG T ++ L G ++ L + + RF ++LE
Sbjct: 215 NTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAF 274
Query: 86 DWMNRKGICVFAP--CDHAVQLDLIGRVHG--FLSAESYFSNLKDDEKTYQ--TYGALLN 139
+ M G + P D A L+ V AE+ F+ + ++ + TY +++
Sbjct: 275 NLMKEMG---YEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQ 331
Query: 140 CYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP 199
C+ + + + A+ M + A +TY ++ K E+ VL +M+ P
Sbjct: 332 CFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEP 391
Query: 200 DNFSYRICINSYGA-RSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
+ ++Y I A R E +E++ + Q + + TY H K +D+A +
Sbjct: 392 NIYTYNALIQGLCAVRRPEEALELV--TLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKE 449
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLE 315
+ +A R + + + YN L++ Y S ++ D+ K + D Y T+++
Sbjct: 450 MFNEALARGLKPNRVTYNTLLNGYCR---GSRLIEAMDILKEMHQNDCTPDHVTYTTLIQ 506
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKAT 375
L++ + +A ++ E E G + N + G G ++A + ++G A
Sbjct: 507 GLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAY 566
Query: 376 TPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
+ + + + AG+ E AL + KG+ P+ +++ +G + D
Sbjct: 567 SASDYYLAIHCLSTAGEMEEA-----QALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDD 621
Query: 436 VEAFV 440
+A +
Sbjct: 622 ADAML 626
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 152/375 (40%), Gaps = 26/375 (6%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLK 125
+I L + R +A+++ + MN + + +P + + +D + + A + F L
Sbjct: 294 VILGLCQNDRIDEAVQMFEKMNERNV---SPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350
Query: 126 DDEKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
T T Y +L++ D A F M G S +TYN ++ K G E
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---------SQPHIV 234
+ D++ +M PD +Y ++ S +E ++ EME S I+
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
L + + L D+A +LK+ + D + Y+ LIS S+ + L
Sbjct: 471 LGLCQQSKIDQACQRGKL-DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 529
Query: 295 W-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
D+ K CK + T++ L K G +EA +VL SG S D N ++ G+C
Sbjct: 530 LEDMVKRQCKPTVVTQN-TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 588
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
G + A +L D+V +G A ++ + +G A + + A V+ + K
Sbjct: 589 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR-------LPEACGVFAQMKSS 641
Query: 414 KPDPKVITSILSKLG 428
P + T LG
Sbjct: 642 GCAPNLFTYTALILG 656
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 145/351 (41%), Gaps = 25/351 (7%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L F A E+ MNR+G C +P + V +D + A + +D
Sbjct: 364 LIHGLCMANSFDDARELFADMNRRG-CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED 422
Query: 128 EKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MCLYSKT--- 179
TY +++ + + ++AL F +M+ +G + ++N I +C SK
Sbjct: 423 GHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 482
Query: 180 ---GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHI 233
G+ ++ +L M PD +Y I+ + + ++ +L +M + +P +
Sbjct: 483 CQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 542
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
V T + H KA I +A +VL + D + YN L+ + G R
Sbjct: 543 V----TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE---R 595
Query: 294 LWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
+L R + + +T ++ L K EA V + + SG + + A+I+
Sbjct: 596 ARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 655
Query: 351 GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
G+C+ G V + ++V G + + +AA +G++ R + ++
Sbjct: 656 GFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 706
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 167/418 (39%), Gaps = 72/418 (17%)
Query: 108 IGRVHGFLSAESYFSNLKDDEKTY-QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
+GR A FS +++ Y Y L++ ++++T+ + M + G +
Sbjct: 23 VGRT---FEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDS 79
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
T+ I+C K G+ ++ V+ EM+++ I P Y A S E+ LR
Sbjct: 80 FTFTTILCGLCKAGKMDEAELVMDEMRSRMIPP-----------YFATSSFLAHELCLRG 128
Query: 227 MESQPHIVLDWSTYASAAHFYI------KANLIDKASDVLKK-AEERLEQKDGIGYNFLI 279
+ +L+ A+++ + I KA +D A ++ + +E+R+ G + L+
Sbjct: 129 SMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLV 188
Query: 280 SLYASLGNKSEVLRLWD--------------LEKTACKRYINR----------------- 308
L S G E L+++ LE + +++
Sbjct: 189 GLMDS-GRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDE 247
Query: 309 -DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT------RIPNAVIIGYCNNGLVQNA 361
Y T+L+ L K G EEA ++ + EL +S + R N VI+G C N + A
Sbjct: 248 VSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEA 307
Query: 362 EAILEDLVEKGKATTPNSWA--VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
+ E + E+ +P+SW+ ++ G AGK + L G P
Sbjct: 308 VQMFEKMNERN--VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLH-----SGVTPSTVA 360
Query: 420 ITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMK 476
TS++ L S D E F R P + Y+ I A+ + G ++E D +K
Sbjct: 361 YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM-LEEACDLIK 417
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 96/245 (39%), Gaps = 37/245 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ + R QT++A M G+A + +TY ++ K + + V +M
Sbjct: 579 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 638
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K+ P+ F+Y I + + ++G + EM I D Y + A K+
Sbjct: 639 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCA-GISPDHVVYGTLAAELCKSGR 697
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+A ++L++ E L +SE W E Y
Sbjct: 698 SARALEILREGRESL--------------------RSEA---WGDEV----------YRF 724
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE---DLV 369
++ L++ G+ E A +++ G +++ G C +G A A+LE DL
Sbjct: 725 AVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLA 784
Query: 370 EKGKA 374
GKA
Sbjct: 785 YGGKA 789
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 133/304 (43%), Gaps = 7/304 (2%)
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI 197
++ V + +KAL +M+ +GI + +TYN ++ Y Q E +++ EM K
Sbjct: 213 IHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGC 272
Query: 198 FPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKAS 257
PD SY + ++ + ++ +M + D TY + H K D+A
Sbjct: 273 PPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEAL 332
Query: 258 DVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEA 316
+ L++ EER Q D +GY+ +++ + G + ++ C + Y ++
Sbjct: 333 EFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDV-VTYTAVVNG 391
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
L K+G+ EEA+K+L++ G +T A++ G C +G A ++ E
Sbjct: 392 LCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPN 451
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV 436
+++VV G GK ++ L+ KG+ P P I ++ L E + +
Sbjct: 452 AITYSVVMHGLRREGKLSEACDVVREMLT-----KGFFPTPVEINLLIKSLCLEQKMNEA 506
Query: 437 EAFV 440
+ F+
Sbjct: 507 KKFM 510
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 112/276 (40%), Gaps = 13/276 (4%)
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGM 220
GIA + +M YS+ G+ VLT M+ + P+ I+ + LE
Sbjct: 166 GIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKA 225
Query: 221 EIILREME---SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
L M+ P++V TY Y ++ A +++ + + D + Y
Sbjct: 226 LRFLERMQLVGITPNVV----TYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYT 281
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINR-DYITMLEALMKLGEHEEAEKVLKEWELS 336
++ EV L + K + ++ Y T++ L K G +EA + L+E E
Sbjct: 282 VMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEER 341
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G D +A++ +C G + A+ I+ +++ KG + ++ V G GK E
Sbjct: 342 GFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEA 401
Query: 397 FQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
+ ++ G KP+ T++L+ L G+
Sbjct: 402 KKMLQQMYK-----HGCKPNTVSYTALLNGLCQHGN 432
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/384 (18%), Positives = 154/384 (40%), Gaps = 59/384 (15%)
Query: 91 KGICVFAPCDHAVQL-----------DLIG--RVHGFLSAESYFSNLKD-------DEKT 130
KG C +HA++L D + V GFL + +++ D K
Sbjct: 249 KGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKL 308
Query: 131 YQ---TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+ TY L++ + D+AL R+ +E G + + Y+ I+ + G+ ++ +
Sbjct: 309 FPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKE 368
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAA 244
++ EM K PD +Y +N +E + +L++M +P+ V +Y +
Sbjct: 369 IVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTV----SYTALL 424
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
+ + +A +++ +EE + I Y+ ++ G SE AC
Sbjct: 425 NGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSE----------ACD- 473
Query: 305 YINRDYIT------------MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
+ R+ +T ++++L + EA+K ++E G + + VI G+
Sbjct: 474 -VVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGF 532
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
C + + A ++L+D+ K ++ + G+ E ++ + KG
Sbjct: 533 CQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEA-----TVYTMKMLKKG 587
Query: 413 WKPDPKVITSILSKLGDEGSVQDV 436
P P +++ + G V+++
Sbjct: 588 LDPTPVTYRAVIHQYCKMGRVEEL 611
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 67/352 (19%), Positives = 135/352 (38%), Gaps = 29/352 (8%)
Query: 127 DEKTYQT----YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
+E+ +Q Y A++N + Q + D+A +M G + +TY ++ K G+
Sbjct: 339 EERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKV 398
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD-LEGMEIILREMESQPHIVLDW---- 237
E+ +L +M P+ SY +N + LE E++ E DW
Sbjct: 399 EEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEE-------DWWTPN 451
Query: 238 -STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
TY+ H + + +A DV+++ + + N LI +E + +
Sbjct: 452 AITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFME 511
Query: 297 --LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
L + +N + T++ + + A +L + L+ D A+I
Sbjct: 512 ECLNRGCAVNAVN--FTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGK 569
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
G ++ A +++KG TP ++ V Y G+ E + + LS +
Sbjct: 570 KGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCRTAY- 628
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFVA-ALRTVIPMNRQMYHAFIKANIRNG 465
++ KL + G+ + + V LRT ++ H +++ + G
Sbjct: 629 ------NQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKG 674
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 115/504 (22%), Positives = 190/504 (37%), Gaps = 87/504 (17%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA-------------------VQLDLI 108
++R L R R + AL V D M R+G P H V DL
Sbjct: 121 VVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLH 180
Query: 109 GRVHGF----------------LSAESYFSNLKDDEKTYQ------TYGALLNCYVRQRQ 146
GR S + L+D ++ +Y A+L ++
Sbjct: 181 GRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKR 240
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
+ +M +G + +T+N ++ + G +E+V VL +M PD Y
Sbjct: 241 WGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYAT 300
Query: 207 CINSYGARSDLEGMEIILREMES---QPHIV----------------------------- 234
++ LE IL M S +P++V
Sbjct: 301 VLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDND 360
Query: 235 --LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE-V 291
LD T+ F+ + L+ + ++L++ E D I Y +I+ + G E V
Sbjct: 361 CPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAV 420
Query: 292 LRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
+ L + C R Y +L+ L +AE ++ + G S + N VI
Sbjct: 421 MLLKSMAACGC-RPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINF 479
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
C GLV+ A +L+ ++ G + S++ V G AGKT+ + L+V V K
Sbjct: 480 LCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALE----LLNVMVN-K 534
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVD- 469
G P+ + +SI S L EG + V ++ V I + +Y+A I + + G G D
Sbjct: 535 GMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRG-GTDR 593
Query: 470 --ELLDSMKADGIDEDEETKEILV 491
E L M + G +E T IL+
Sbjct: 594 AIEFLAYMVSSGCMPNESTYTILI 617
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 173/431 (40%), Gaps = 51/431 (11%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--K 125
+IR L R R AL V D M +G C + +++ LD + G+ A + + K
Sbjct: 257 LIRALCVRGRIPDALAVFDDMLHRG-CSPSVVTYSILLDATCKESGYRQAMALLDEMRAK 315
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
E TY L+N + D+AL+ + G +TY ++ + ++++V
Sbjct: 316 GCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEV 375
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
++L EM + N PD ++ + S + ++ R +E H+ S + A
Sbjct: 376 EELLAEMTSNNCAPDEVTFNTIVTSLCQQG------LVDRAIEVVDHM----SEHGCVAD 425
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
++++D DV + ++ +E L+S S G K + +
Sbjct: 426 IVTYSSILDGLCDV-GRVDDAVE---------LLSRLKSYGCKPDTIA------------ 463
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y T+L+ L + E AE+++ E S D N V+ C GLV A ++
Sbjct: 464 ----YTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVV 519
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSI 423
E + E G + ++ + G + C+ A+ + ++ G KPD ++
Sbjct: 520 EQMSENGCSPDIVTYNCIIDGLCNE-------SCIDDAMELLSDLQSCGCKPDIVTFNTL 572
Query: 424 LSKLGDEGSVQDVEAFVA-ALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGI 480
L L +D E +A +R+ P + ++ I + + G E L M +G
Sbjct: 573 LKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGC 632
Query: 481 DEDEETKEILV 491
+ T I+V
Sbjct: 633 VPNSSTYSIVV 643
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 132/339 (38%), Gaps = 11/339 (3%)
Query: 115 LSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
L AE S+ DE T+ T A L ++ D+A+ +M E G + +TYN I+
Sbjct: 483 LMAEMLCSDCPPDEVTFNTVVASL---CQKGLVDRAIRVVEQMSENGCSPDIVTYNCIID 539
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
+ ++L+++++ PD ++ + E E ++ M + +
Sbjct: 540 GLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANM-MRSNCP 598
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
D T+ + + L+ +A + LK E + Y+ ++ G L L
Sbjct: 599 PDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALEL 658
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
I Y T++ L K G+ EEA +L+ +G DT ++ G C
Sbjct: 659 LSGMTNGTPDLIT--YNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCR 716
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
A +L + + G + + V G+ +T+ C +S G
Sbjct: 717 EDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVS-----SGCM 771
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQM 453
PD +L L G + + + +A+L ++ +++++
Sbjct: 772 PDESTYVILLEALAYGGLLDEAKRLLASLCSLGVLDKKL 810
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 150/359 (41%), Gaps = 35/359 (9%)
Query: 105 LDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIAL 164
LDL+ RV G L + Y +++ + + + A + +M GI+
Sbjct: 182 LDLLRRVDGNLV-----------QPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISP 230
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIIL 224
+ +TY+ ++ + GQ + D+ +M +NI PD +++ I ++ + ++ + +
Sbjct: 231 NVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVF 290
Query: 225 REMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
M Q P++V TY S Y ++KA +L +R D YN LI
Sbjct: 291 AMMMKQGIKPNVV----TYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDG 346
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGN 338
+ + E + L+ K ++I D +T +++ L KLG+ A K++ E G
Sbjct: 347 FCKIKKVDEAMNLF---KEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 403
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE---- 394
D ++++ C N V A A+L L ++G ++ ++ G G+ E
Sbjct: 404 PPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHN 463
Query: 395 -------RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV 446
+G+ +V + G K ++LSK+ D + D + +R++
Sbjct: 464 IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSL 522
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 109/264 (41%), Gaps = 1/264 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ + + + + + F M + GI + +TY +M Y + K +L M
Sbjct: 269 TFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTM 328
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD SY I I+ + ++ + +EM + HI+ D TY S K
Sbjct: 329 SQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK-HIIPDVVTYNSLIDGLCKLGK 387
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
I A ++ + +R D I Y+ ++ + + L K R Y
Sbjct: 388 ISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTI 447
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ L K G E+A + ++ + G + +I G+CN GL A A+L + +
Sbjct: 448 LIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNS 507
Query: 373 KATTPNSWAVVAAGYFDAGKTERG 396
++ ++ FD + ++
Sbjct: 508 CIPDAVTYEIIIRSLFDKDENDKA 531
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 3/163 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L++ + + AL +M + G+ +TY+ I+ K Q +K +LT++
Sbjct: 374 TYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKL 433
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + I P+ ++Y I I+ LE I ++ + + + +TY H + L
Sbjct: 434 KDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNI-TVNTYTVMIHGFCNKGL 492
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLI-SLYASLGN-KSEVLR 293
D+A +L K ++ D + Y +I SL+ N K+E LR
Sbjct: 493 FDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLR 535
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 20/347 (5%)
Query: 78 FSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD-EKTYQTYGA 136
+ +ALE+ + +N P AV L ++GR + A+ F + Q Y +
Sbjct: 60 WQRALELYECLNVARWYAPNPRMLAVMLSVLGRANQPGLAQELFDRAESSIGNCVQVYNS 119
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP-DVLTEMKAK 195
L++ Y R + +M++ G +T+N ++ ++ G E + +L ++ A
Sbjct: 120 LMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAA 179
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANL 252
+ PD +Y I++ + L +I EM+ Q P I W TY + Y +A
Sbjct: 180 GLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDI---W-TYNAMISVYGRAGR 235
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
++ AS + + +E+ D + YN ++ +A G EV R+ + + A Y T
Sbjct: 236 VEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNT 295
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
M+ K G H +AE++ + + G D+ +I G V A A+ ED+++
Sbjct: 296 MIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQ 355
Query: 373 KATTPNSWAVVAAGYFDA---GKTERGFQCMKAALSVYVEGKGWKPD 416
T +++ + Y A E + CM A G +PD
Sbjct: 356 VRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRA--------GVRPD 394
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 139/379 (36%), Gaps = 55/379 (14%)
Query: 4 KLKLSTNTQIHNAVFSRFYYTNRINKTTLYS-IISPLGNPGT--RIEPELDNWVKNGNKV 60
KLKL N +I VF T+ YS ++S G R LDN V G +
Sbjct: 647 KLKLWQNAEI---VFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQP 703
Query: 61 RVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA--VQLDLIGRVHGFLSAE 118
++ R +A E+S++ R P V R A
Sbjct: 704 NAACANYVLEAF---GRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEAR 760
Query: 119 SYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLY 176
S + +++ + Q + ALL Y R+ A + +K+ G+ L YN ++ LY
Sbjct: 761 SMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLY 820
Query: 177 SKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHI 233
SK G Y K V M+ PD ++ I Y ++ + +LREM + P+I
Sbjct: 821 SKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNI 880
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
STY + Y + + A V K E + D YN +I++Y
Sbjct: 881 ----STYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVY----------- 925
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
K GEH + E+V+++ + G + ++ Y
Sbjct: 926 ------------------------RKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYG 961
Query: 354 NNGLVQNAEAILEDLVEKG 372
G AE +LE L E G
Sbjct: 962 KGGATGKAEEVLETLPEIG 980
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 10/294 (3%)
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
Q A S + + G+ T+TYN ++ S + + EM+ + PD ++Y
Sbjct: 165 QEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYN 224
Query: 206 ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
I+ YG +E I R M+ Q D TY S H + + I++ + +
Sbjct: 225 AMISVYGRAGRVEAASSIFRIMQEQ-GFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRD 283
Query: 266 RLEQKDGIGYNFLISLYASLG--NKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEH 323
D I YN +I +Y G K+E L + E+ C + + +++ L K G
Sbjct: 284 ARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVT--FTVLIDTLGKAGFV 341
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
EA + ++ S + +A+I Y + +AE ++ G +++V+
Sbjct: 342 NEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVM 401
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
+F A E+ KA + G G KP+ V ++ + S+ ++E
Sbjct: 402 LDVFFKAEMPEKCIILYKAMV-----GSGLKPELSVYAIMVRVFYQKSSLAEIE 450
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 149/343 (43%), Gaps = 29/343 (8%)
Query: 154 FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGA 213
FR ++ G A +T Y+ ++ Y++TG +E+ L M A + P+ + ++G
Sbjct: 658 FRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGR 717
Query: 214 RSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGI 273
+ + + + + I + T+ H + + +++A + ++ E
Sbjct: 718 AGKAKELSEFYQRL-PEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQ 776
Query: 274 GYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRD-YITMLEALMKLGEHEEAEKVLK 331
+ L++LY+ + + L D++K + ++ D Y M+ KLG + +A V K
Sbjct: 777 VFKALLALYSRETVEIDAEELVKDIKKAGLE--LDMDIYNHMISLYSKLGSYRKAALVFK 834
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+ G S D N +I+ Y N +VQ A+A+L ++++ G A +++ + + Y
Sbjct: 835 GMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQ 894
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDP---KVITSILSKLGDEGSVQDV------EAFVAA 442
E K+ + G KPD V+ ++ K G+ +++V + F +
Sbjct: 895 AYEDAELVFKS-----IAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPS 949
Query: 443 LRTVIPMNRQMYHAFIKANIRNGKG--VDELLDSMKADGIDED 483
L T+ H + + + G +E+L+++ G+ D
Sbjct: 950 LTTI--------HMLMDSYGKGGATGKAEEVLETLPEIGMSPD 984
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 122/280 (43%), Gaps = 11/280 (3%)
Query: 149 KALSHF-RKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
K LS F +++ EMGI ++ T+ I +S+ G E+ + +M+ P ++
Sbjct: 722 KELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKAL 781
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
+ Y + E ++++++ + + LD Y Y K KA+ V K +E
Sbjct: 782 LALYSRETVEIDAEELVKDIK-KAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIG 840
Query: 268 EQKDGIGYNFLISLYA--SLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEE 325
D +N LI LY+ + +++ L L ++ KT I+ Y T++ A +L +E+
Sbjct: 841 CSPDATTFNTLIMLYSRNQMVQEAQAL-LREMIKTGNAPNIS-TYTTLISAYGRLQAYED 898
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
AE V K +G D N +I Y G + E ++E + G + + ++
Sbjct: 899 AELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMD 958
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
Y G T + + ++ + G PD TSI++
Sbjct: 959 SYGKGGATGKAEEVLETLPEI-----GMSPDAIHYTSIIN 993
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 85/436 (19%), Positives = 157/436 (36%), Gaps = 84/436 (19%)
Query: 103 VQLDLIGRVHGFLS-AESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
V +D +G+ GF++ A + F ++ + T Q + A++ Y + A + M
Sbjct: 330 VLIDTLGKA-GFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLR 388
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
G+ L Y+ ++ ++ K EK + M + P+ Y I + + +S L
Sbjct: 389 AGVRPDLLAYSVMLDVFFKAEMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSLAE 448
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKAS-------------DVLKKAEER 266
+E + +EM + S+ + FY +A ++ K S DVL E
Sbjct: 449 IENLSKEMVQSSASLAALSSTLAKGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEAS 508
Query: 267 LEQKDGIG----------------YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+ D Y L + A G SE +T + ++ D+
Sbjct: 509 GKLSDARDLVHAVSSIEPSVAAHLYKRLALMLAKAGRFSEAEEEMRTSQTYGQAQVS-DF 567
Query: 311 ITMLEALM-KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG------------- 356
+ +L A + G +EA + G D + ++ YC G
Sbjct: 568 LKVLVASYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCL 627
Query: 357 ----------------------LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
L QNAE + DL G A ++++ + + Y + G E
Sbjct: 628 HAFEVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFE 687
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQ 452
R + + ++ G +P+ +L G G +++ F L + P +R
Sbjct: 688 RATRALDNMVAA-----GLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRT 742
Query: 453 ---MYHAFIKANIRNG 465
++HAF RNG
Sbjct: 743 FVVIFHAF----SRNG 754
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Query: 109 GRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
GR+ + AE F ++ + + Y ++N Y + + K +MK G S
Sbjct: 891 GRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSL 950
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
T + +M Y K G K +VL + + PD Y INS+ D I LR+
Sbjct: 951 TTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRK 1010
Query: 227 M 227
M
Sbjct: 1011 M 1011
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 140/368 (38%), Gaps = 35/368 (9%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKG--------------ICVFAPCDHAVQLDLIGRVHG 113
++ L + Q LE+ D+M KG +C D AV++ +H
Sbjct: 308 LVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEI-----LHH 362
Query: 114 FLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
+S +D E TY L+ ++ + A R + G+ T+N ++
Sbjct: 363 MVS--------RDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLI 414
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
T E ++ EMK K PD F+Y I I S + L+ ++L+EME
Sbjct: 415 QGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELS-GC 473
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
+ Y + K N + A D+ + E + + YN LI+ E +
Sbjct: 474 ARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQ 533
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
L D + Y TML+ + G+ + A +++ L+G D +I G C
Sbjct: 534 LMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLC 593
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
G V A +L + KG TP ++ V +T+ + + + KG
Sbjct: 594 KAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMME-----KGD 648
Query: 414 KPDPKVIT 421
PD VIT
Sbjct: 649 PPD--VIT 654
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 147/333 (44%), Gaps = 15/333 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ AL+N R + L M E G L TYN ++ K G+ ++ ++L M
Sbjct: 304 TFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHM 363
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+++ P+ +Y I + + +E + R + S+ ++ D T+ S +
Sbjct: 364 VSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSK-GVLPDVCTFNSLIQGLCLTSN 422
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLI-SLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+ A ++ ++ +E+ D Y+ LI SL + K ++ L ++E + C R + Y
Sbjct: 423 REIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVV-YN 481
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T+++ L K +AE + + E+ G S + N +I G C + V+ A +++ ++ +
Sbjct: 482 TLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIME 541
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G ++ + + G +R A + + G +PD +++ L G
Sbjct: 542 GLKPDKFTYTTMLKYFCQQGDIKRA-----ADIVQNMTLNGCEPDIVTYGTLIGGLCKAG 596
Query: 432 SVQDVEAFVAALRTV----IPMNRQMYHAFIKA 460
V DV + LR+V + + Q Y+ I+A
Sbjct: 597 RV-DVAS--KLLRSVQMKGMVLTPQAYNPVIQA 626
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 8/258 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYN---DIMCLYSKTGQYEKVPDVL 189
TY L+ +R+ +AL ++M+ G A + + YN D +C ++ G E D+
Sbjct: 444 TYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE---DIF 500
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+M+ + + +Y IN +E ++ +M + + D TY + ++ +
Sbjct: 501 DQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIME-GLKPDKFTYTTMLKYFCQ 559
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
I +A+D+++ + D + Y LI G +L + +
Sbjct: 560 QGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQA 619
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN-NGLVQNAEAILEDL 368
Y +++AL K +EA ++ +E G+ D V G CN G +Q A ++
Sbjct: 620 YNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEM 679
Query: 369 VEKGKATTPNSWAVVAAG 386
+EKG S+ +A G
Sbjct: 680 LEKGILPEFPSFGFLAEG 697
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 78/396 (19%), Positives = 148/396 (37%), Gaps = 49/396 (12%)
Query: 137 LLNCYVRQRQTDKALSHFR-KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
LL+ RQ + ALS F+ + + +++++ ++ G ++ + +L +M +
Sbjct: 62 LLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSS 121
Query: 196 NIFPDNFSYRICINSYGARSDLEG-MEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
I D ++ I + +Y L + + ME + D Y A +KAN +
Sbjct: 122 KIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLK 181
Query: 255 KASDVLKKAEERLEQKDGIGYNFLI-SLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
+ K D +N LI +L + + +L L D+ R + + T+
Sbjct: 182 LVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGL-RPDEKTFTTL 240
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
++ ++ + E A ++ + SG + N ++ G C G ++ A + + E+G
Sbjct: 241 MQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGF 298
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
++ + G G ++G + M L KG++ D S++S L G +
Sbjct: 299 CPDQVTFNALVNGLCRTGHIKQGLEMMDFMLE-----KGFELDVYTYNSLISGLCKLGEI 353
Query: 434 QD-VEAFVAALRTVIPMNRQMYHAFIK--------------ANIRNGKGV---------- 468
+ VE + N Y+ I A + KGV
Sbjct: 354 DEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSL 413
Query: 469 -------------DELLDSMKADGIDEDEETKEILV 491
EL + MK G D DE T IL+
Sbjct: 414 IQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILI 449
>gi|302816774|ref|XP_002990065.1| hypothetical protein SELMODRAFT_130980 [Selaginella moellendorffii]
gi|300142185|gb|EFJ08888.1| hypothetical protein SELMODRAFT_130980 [Selaginella moellendorffii]
Length = 458
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 4/267 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ Q +A M GI + +TYN I+ Y+K+G +K+ D+ +M
Sbjct: 130 TYSLLIKSCCDCGQLSRASDLLADMTARGIQPNRVTYNIILDAYAKSGSLDKLHDLALQM 189
Query: 193 ---KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ + PD++S + +G R D+ ME + + + P D T S Y K
Sbjct: 190 LQSPSPSCRPDHWSRNAIVKGFGNRGDIRRMEEWFQRLTT-PSDGPDSLTLHSLMAAYAK 248
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A + DK V++ Q D + YN LI+ Y G K+++L+ + K R +
Sbjct: 249 AEMFDKMHAVVRYIHRYHYQVDAVTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPDSVT 308
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T++ K G + ++L++ + DT + N+V+ Y + + + +
Sbjct: 309 YCTLINFYGKFGMQRKLPRLLEQMSMHKVQPDTALYNSVLDAYRRASDISSIDRYFAAMQ 368
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERG 396
E+G ++ ++ Y G T++
Sbjct: 369 EQGCKPDHLTYNILIQAYRSQGLTDKA 395
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N Y R + + L F MK G+ ++TY ++ Y K G K+P +L +M
Sbjct: 273 TYNILINAYGRAGRKTQMLKTFTSMKCGGVRPDSVTYCTLINFYGKFGMQRKLPRLLEQM 332
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD Y +++Y SD+ ++ M+ Q D TY Y L
Sbjct: 333 SMHKVQPDTALYNSVLDAYRRASDISSIDRYFAAMQEQ-GCKPDHLTYNILIQAYRSQGL 391
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISL 281
DKA DV+ +E+L+Q+D I F+ SL
Sbjct: 392 TDKA-DVMAVEQEKLKQRDSINRLFVSSL 419
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 60/334 (17%), Positives = 137/334 (41%), Gaps = 19/334 (5%)
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI-ILRE 226
TY ++ + K + ++ + M A P ++ +++Y RS+L + +L+
Sbjct: 59 TYIRLLEMLGKCKRPDEAASLFQTMLADGCGPSREAFTALMSAY-TRSNLMSTAMEVLQA 117
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
M + PH D TY+ + +ASD+L R Q + + YN ++ YA G
Sbjct: 118 MNATPHCSPDVFTYSLLIKSCCDCGQLSRASDLLADMTARGIQPNRVTYNIILDAYAKSG 177
Query: 287 NKSEV----LRLWDLEKTACKR-YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+ ++ L++ +C+ + +R+ I ++ G+ E+ + + D
Sbjct: 178 SLDKLHDLALQMLQSPSPSCRPDHWSRNAI--VKGFGNRGDIRRMEEWFQRLTTPSDGPD 235
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+ ++++ Y + A++ + ++ ++ Y G+ R Q +K
Sbjct: 236 SLTLHSLMAAYAKAEMFDKMHAVVRYIHRYHYQVDAVTYNILINAY---GRAGRKTQMLK 292
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV--AALRTVIPMNRQMYHAFIK 459
S ++ G +PD ++++ G G + + + ++ V P + +Y++ +
Sbjct: 293 TFTS--MKCGGVRPDSVTYCTLINFYGKFGMQRKLPRLLEQMSMHKVQP-DTALYNSVLD 349
Query: 460 ANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
A R +D +M+ G D T IL+
Sbjct: 350 AYRRASDISSIDRYFAAMQEQGCKPDHLTYNILI 383
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 158/366 (43%), Gaps = 17/366 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +++ Y + KAL M+ G+ + TYN I+ L K G+ + VL EM
Sbjct: 295 SYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREM 354
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ I PDN Y I+ + + EM S+ I D+ TY + + +
Sbjct: 355 MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK-ISPDYITYTTLIQGFGQGGK 413
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ + ++ + R + D + Y LI +Y G E++ + L + + + +T
Sbjct: 414 VIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAG---EMVNAFSLHNEMVQMGMTPNIVT 470
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+++ L K GE + A ++L E G + I N+++ G C G ++ A +++++
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G ++ V Y G ++ + ++ L +G +P +++
Sbjct: 531 VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLD-----RGLQPTVVTFNVLMNGFCM 585
Query: 430 EGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKAN-IRNGKG-VDELLDSMKADGIDEDEE 485
G ++D + + + + ++P + Y+ +K + IRN ++ M+ G+ D
Sbjct: 586 LGMLEDGDRLLGWMLEKGIVP-DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSN 644
Query: 486 TKEILV 491
T IL+
Sbjct: 645 TYNILI 650
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 137/313 (43%), Gaps = 13/313 (4%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
LK DE TY T L++ Y + + A S +M +MG+ + +TY ++ K G+ +
Sbjct: 429 LKPDEVTYTT---LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
++L EM+ K + + Y +N ++E +++EME I D TY +
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG-IDPDAITYTTV 544
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL--WDLEKTA 301
Y + IDKA +L++ +R Q + +N L++ + LG + RL W LEK
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
I Y T+++ K+ K G + D+ N +I G+C ++ A
Sbjct: 605 VPDAIT--YNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEA 662
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
+ ++++EKG T S+ + ++ K + + + G G D ++
Sbjct: 663 WFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEE-----MRGHGLVADGEIYN 717
Query: 422 SILSKLGDEGSVQ 434
+ +EG V+
Sbjct: 718 FFVDMCYEEGDVE 730
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 144/377 (38%), Gaps = 56/377 (14%)
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL- 217
E GI+ +T +YN I+ + G+ ++ +L +M ++ PD SY I+ Y +L
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 218 ------EGMEI----------------------------ILREMESQPHIVLDWSTYASA 243
+ M+I +LREM SQ I+ D Y +
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK-IIPDNVVYTTL 369
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
H + K + A+ K +E L +K Y +L G +V+ +L
Sbjct: 370 IHGFFKLGHVRTAN---KWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS 426
Query: 304 RYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
R + D Y T+++ K GE A + E G + + A+I G C +G +
Sbjct: 427 RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDT 486
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
A +L+++ +KG + + G AG E+ + MK +E G PD
Sbjct: 487 ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKE-----MEVAGIDPDAITY 541
Query: 421 TSILSKLGDEGSVQDVEAFVAAL------RTVIPMNRQMYHAFIKANIRNGKGVDELLDS 474
T+++ G + + + TV+ N M + + +G D LL
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDG---DRLLGW 598
Query: 475 MKADGIDEDEETKEILV 491
M GI D T L+
Sbjct: 599 MLEKGIVPDAITYNTLM 615
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 155/362 (42%), Gaps = 33/362 (9%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG+L+ R +TD AL ++K G T+TYN ++ K+GQ E+ VL EM
Sbjct: 674 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEM 733
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ------PHIVLDWSTYASAAHF 246
K PD +Y I+S DLE + +M S+ P++V TY+ +
Sbjct: 734 VGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVV----TYSVLING 789
Query: 247 YIKANLIDKA----SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
K ID+A ++++K+ + L I YN + +E L +
Sbjct: 790 LCKVGRIDEARELIQEMMRKSCDVLPNI--ITYNSFLDGLCKQSMMAEACELMRSLRDGS 847
Query: 303 KRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
R ++ D + T+++ L K G+ +EA V + G + N ++ G C ++
Sbjct: 848 LR-VSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKME 906
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
A A++E +V+KG +++V+ + A + + + S +G P+
Sbjct: 907 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMAS-----RGCTPNVVT 961
Query: 420 ITSILSKLGDEGSVQDVEAFV----AALRTVIPMNRQMYHAFIKANIRNG-KGVDE-LLD 473
SI+ L S Q EAF L+ + ++ Y I R G G E LLD
Sbjct: 962 FNSIIDGLCK--SDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLD 1019
Query: 474 SM 475
+M
Sbjct: 1020 AM 1021
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 152/379 (40%), Gaps = 31/379 (8%)
Query: 33 YSIISPLGNPGTRIEPELD---NWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN 89
YS++ +R++ L+ G V II L K R +A ++ D M
Sbjct: 433 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMA 492
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
K V + +D + R AE+ + D + TY + +N + +
Sbjct: 493 LKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPD-TY-AFNCCINGLSKLGDVSR 550
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
AL + +M E+ + +T+N ++ K G +E+ + EM AKN+ PD ++ I+
Sbjct: 551 ALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 610
Query: 210 SYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
+E IL M + P++V TY + H K+ I++A L++
Sbjct: 611 GLCKAGQVEAARDILDLMGNLGVPPNVV----TYNALVHGLCKSGRIEEACQFLEEMVSS 666
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRL--------WDLEKTACKRYINRDYITMLEALM 318
D I Y L+ + L+L WD + Y +++ L
Sbjct: 667 GCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT--------YNILVDGLW 718
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK-GKATTP 377
K G+ E+A VL+E G+ D N +I C G ++ A + D+ + + P
Sbjct: 719 KSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVP 778
Query: 378 N--SWAVVAAGYFDAGKTE 394
N +++V+ G G+ +
Sbjct: 779 NVVTYSVLINGLCKVGRID 797
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 160/371 (43%), Gaps = 27/371 (7%)
Query: 120 YFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFR-KMKEMGIALSTLTYNDIMCLYSK 178
+F ++ ++ Y +L R +T +AL FR +M G+A + +TYN I+ K
Sbjct: 169 FFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCK 228
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVL 235
+ + ++ E+ + PD +Y I+S DLE + +M S+ P++V
Sbjct: 229 SNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVV- 287
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ--KDGIGYNFLISLYASLGNKSEVLR 293
TY+ + K ID+A +++++ + + I YN + +E
Sbjct: 288 ---TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACE 344
Query: 294 LWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
L + R ++ D +T +++ L K G+ +EA V + G + NA++
Sbjct: 345 LMRSLRDGSLR-VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVN 403
Query: 351 GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG 410
G C ++ A A++E +V+KG +++V+ + A + + + + S
Sbjct: 404 GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS----- 458
Query: 411 KGWKPDPKVITSILSKLGDEGSVQDVEAFV----AALRTVIPMNRQMYHAFIKANIRNGK 466
+G P+ SI+ L S + EAF AL+ + ++ Y I R G+
Sbjct: 459 RGCTPNVVTFNSIIDGLCK--SDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGR 516
Query: 467 G--VDELLDSM 475
+ LLD+M
Sbjct: 517 AGQAEALLDAM 527
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 155/401 (38%), Gaps = 35/401 (8%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
LD K EL R +RD R + S ++ G+C Q+D
Sbjct: 330 LDGLCKQSMTAEACELMRSLRDGSLRVS-PDTVTFSTLID--GLC------KCGQIDEAC 380
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
V + A Y N+ TY AL+N + + ++A + M + G+ +TY
Sbjct: 381 SVFDDMIAGGYVPNVI-------TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 433
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI-ILREME 228
+ ++ + K + ++ ++L M ++ P+ ++ I+ +SD G + +M
Sbjct: 434 SVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL-CKSDRSGEAFQMFDDMA 492
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
+ +V D TY + + +A +L + + D +N I+ + LG+
Sbjct: 493 LKHGLVPDKITYCTLIDGLFRTGRAGQAEALL----DAMPDPDTYAFNCCINGLSKLGDV 548
Query: 289 SEVL----RLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
S L R+ +LE K N ++ K G E+A + +E D
Sbjct: 549 SRALQVYNRMLELELVPDKVTFN----ILIAGACKAGNFEQASALFEEMVAKNLQPDVMT 604
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
A+I G C G V+ A IL+ + G ++ + G +G+ E Q ++ +
Sbjct: 605 FGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV 664
Query: 405 SVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
S G PD S++ L D V+ L++
Sbjct: 665 S-----SGCVPDSITYGSLVYALCRASRTDDALQLVSELKS 700
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 128/296 (43%), Gaps = 22/296 (7%)
Query: 114 FLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
F A + F + K+ + T+GAL++ + Q + A M +G+ + +TYN
Sbjct: 583 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 642
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES-- 229
++ K+G+ E+ L EM + PD+ +Y + + S + ++ E++S
Sbjct: 643 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 702
Query: 230 -QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
P D TY K+ ++A VL++ + D + YN LI G+
Sbjct: 703 WDP----DTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDL 758
Query: 289 SEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
E RL + R + +T ++ L K+G +EA ++++ E+ S D +P
Sbjct: 759 EEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQ--EMMRKSCDV-LP 815
Query: 346 NAV-----IIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTE 394
N + + G C ++ A ++ L + +P+ +++ + G G+T+
Sbjct: 816 NIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTD 871
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 127/307 (41%), Gaps = 20/307 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALS--TLTYNDIMCLYSKTGQYEKVPDVLT 190
TY + L+ +Q +A R +++ + +S T+T++ ++ K GQ ++ +V
Sbjct: 819 TYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFD 878
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+M A P+ +Y + +N +E ++ M + + D TY+ + KA
Sbjct: 879 DMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDK-GVTPDVITYSVLVDAFCKA 937
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD- 309
+ +D+A ++L R + + +N +I E +++D K + D
Sbjct: 938 SHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFD--DMTLKHGLAPDK 995
Query: 310 --YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+++ L + G +AE +L DT N I G G V A L
Sbjct: 996 ITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSKLGDVSRA---LHR 1048
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
++E ++ ++ AG AG E+ +AL + K +PD +++ L
Sbjct: 1049 MLELELVPDKVTFNILIAGACKAGNFEQA-----SALFEEMVAKNLQPDVMTFGALIDGL 1103
Query: 428 GDEGSVQ 434
G V+
Sbjct: 1104 CKAGQVE 1110
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 169/380 (44%), Gaps = 20/380 (5%)
Query: 35 IISPLGNPG--TRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKG 92
IIS LG G + L++ K+G + V +I R+ +A+ V M +G
Sbjct: 4 IISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 93 ICVFAPCDHAVQLDLIGRV-HGFLSAESYFSNLKD-----DEKTYQTYGALLNCYVRQRQ 146
C + V L++ G++ + + F +K+ DE TY T L+ C R
Sbjct: 64 -CKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNT---LITCCRRGSL 119
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
++A + F+ MK MG +TYN ++ +Y K+ + ++ +VL EM+ P +Y
Sbjct: 120 HEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNS 179
Query: 207 CINSYGARSDL--EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE 264
I++Y AR L E ME L+ + I LD TY + +++A + A V +
Sbjct: 180 LISAY-ARDGLLKEAME--LKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMR 236
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHE 324
+ + +N LI ++ + G +E++++++ K +C + T+L + G
Sbjct: 237 AAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDS 296
Query: 325 EAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
E V KE + +G + N +I Y G A I + ++E G +++ V
Sbjct: 297 EVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVL 356
Query: 385 AGYFDAG---KTERGFQCMK 401
A G ++E+ F MK
Sbjct: 357 AALARGGLWEQSEKIFAEMK 376
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 132/326 (40%), Gaps = 26/326 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y R D+A+ +++M E GI TYN ++ ++ G +E+ + EM
Sbjct: 316 TYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEM 375
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
K P+ +Y +++Y ++ M + E+ S +PH VL +
Sbjct: 376 KDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLV--------- 426
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGY-------NFLISLYASLGNKSEVLRLWDLEKTAC 302
L++ D+L +AE + G+ N ++S+Y ++ + + +
Sbjct: 427 --LVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESG 484
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
Y +++ + E +E+VLKE G DT N VI YC NG ++ A
Sbjct: 485 FTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEAS 544
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
I ++ E G ++ A Y E ++ Y+ G KP+ S
Sbjct: 545 RIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVR-----YMIKHGCKPNQNTYNS 599
Query: 423 ILSKLGDEGSVQDVEAFVAALRTVIP 448
++ D F+++L + P
Sbjct: 600 VVDGYCKHNHRDDAIMFISSLHELDP 625
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 7/175 (4%)
Query: 93 ICVFAPCDHAVQLDLIGRVHG----FLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQ 146
IC HAV L + V+ + AE F LK T A+L+ Y R++
Sbjct: 410 ICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQM 469
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
K M E G S TYN +M ++S++ +E+ +VL E+ AK I PD SY
Sbjct: 470 FTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNT 529
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK 261
I +Y ++ I EM + +V D TY + Y ++ + A DV++
Sbjct: 530 VIFAYCRNGRMKEASRIFSEMR-ESGLVPDVITYNTFVASYAADSMFEDAIDVVR 583
>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1385
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 1/259 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ LLN + + A RKM E G + +TYN ++ Y K G+Y+ +++ M
Sbjct: 181 TFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAM 240
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+K I D +Y + I+ +S +ILR M + + TY + + +K
Sbjct: 241 ASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKN-MVYPNEITYNTLINGLVKEGK 299
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
I A+ V ++ + + YN LI + S GN E LRL D+ + R Y
Sbjct: 300 IGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGA 359
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+L + K + VL+ + G +I G C NGL++ A +L+D+++
Sbjct: 360 LLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVS 419
Query: 373 KATTPNSWAVVAAGYFDAG 391
+ +++V+ G+ G
Sbjct: 420 VSPDIVTFSVLVNGFLKTG 438
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 130/303 (42%), Gaps = 12/303 (3%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +L++ +++ + AL F M G+ + +N ++ YS+ G+ KV D+L+ M+
Sbjct: 657 YTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMR 716
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
++++ + +Y I ++ Y R + + EM D T+ S Y K+ +
Sbjct: 717 SRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHG-FAPDRLTWHSLILGYCKSGSL 775
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---Y 310
D A L+K + D N L+S L ++E+ +DL K + + Y
Sbjct: 776 DVAVKFLRKITVEGFKVDCFTLNVLVS---KLCERNEIKMAFDLVKQLNMLGVTPNVDTY 832
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++ ++ +EA +L +G + + +I G C G V+ A + +++
Sbjct: 833 NSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKI 892
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G ++ + + + G + KT+ + + L + + P T+++ E
Sbjct: 893 LGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQI-----IPTVATFTTLMHTYCKE 947
Query: 431 GSV 433
G+V
Sbjct: 948 GNV 950
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 86/414 (20%), Positives = 155/414 (37%), Gaps = 21/414 (5%)
Query: 77 RFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHG----FLSAESYFSNLKD--DEKT 130
R +A D M+R G+ AP +V D I +G L A S F + +
Sbjct: 493 RLEEAEYFVDHMSRMGL---AP--SSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPS 547
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
TY LL + ++A + + A+ + YN ++ L S++G +L
Sbjct: 548 QFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLD 607
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
EM N PD+F+Y I + + ++ + + + + Y S +K
Sbjct: 608 EMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKE 667
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
A + + Q D I +N L+ Y+ G S+V + ++ + Y
Sbjct: 668 GHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATY 727
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+L K K+ E + G + D +++I+GYC +G + A L +
Sbjct: 728 NILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITV 787
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+G + V+ + + + + F +K + G P+ S+ +
Sbjct: 788 EGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQ-----LNMLGVTPNVDTYNSLFNGFVRT 842
Query: 431 GSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGI 480
S + + AL P +Q + I+ R G KG EL D MK G+
Sbjct: 843 CSFDEARCILHALLENGYAPTCKQ-FTTLIRGMCRMGNVKGAMELQDEMKILGV 895
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 133/331 (40%), Gaps = 28/331 (8%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGR----VHGFLSAESYFSNL-KDDE 128
K+ R+ A E+ D M KGI C + V +D + R G+L N+ +E
Sbjct: 226 KKGRYKAASELIDAMASKGIAADV-CTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNE 284
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
TY T L+N V++ + A F +M + +++TYN ++ + G E+ +
Sbjct: 285 ITYNT---LINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRL 341
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
M + + P+ +Y +N + + +L M + + +Y +
Sbjct: 342 CDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMR-MDGVRVGHISYTTMIDGLC 400
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG-NKSEVLRLWDLEKTACKRYIN 307
K L+++A +L + D + ++ L++ + G + VL
Sbjct: 401 KNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVL--------------- 445
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
+ T++ K+G +EA SG+ D + ++ +C G ++ AE ++
Sbjct: 446 --HSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDH 503
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ G A + ++ + Y ++G + F
Sbjct: 504 MSRMGLAPSSVTFDCIIDTYGNSGDALKAFS 534
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L N +VR D+A + E G A + + ++ + G + ++ EM
Sbjct: 831 TYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEM 890
Query: 193 KAKNIFPDNFSYRICINSYG-ARSDLEGMEI--ILREMESQPHIVLDWSTYASAAHFYIK 249
K + + I +R E I I+ EM+ P + +T+ + H Y K
Sbjct: 891 KILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTV----ATFTTLMHTYCK 946
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ KA ++ E+ + D YN LIS + G+ +L++ E + N
Sbjct: 947 EGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYE-EMEQRDIWPNTS 1005
Query: 310 -YITMLEALMKLGEH-EEAEKVLKE 332
YI ++++ + G + E+EK+L++
Sbjct: 1006 IYIVLIDSFLCTGNYIVESEKLLRD 1030
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 20/347 (5%)
Query: 78 FSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD-EKTYQTYGA 136
+ +ALE+ + +N P AV L ++GR + A+ F + Q Y +
Sbjct: 71 WQRALELYECLNVARWYAPNPRMLAVMLSVLGRANQPGLAQELFDRAESSIGNCVQVYNS 130
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP-DVLTEMKAK 195
L++ Y R + +M++ G +T+N ++ ++ G E + +L ++ A
Sbjct: 131 LMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAA 190
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANL 252
+ PD +Y I++ + L +I EM+ Q P I W TY + Y +A
Sbjct: 191 GLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDI---W-TYNAMISVYGRAGR 246
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
++ AS + + +E+ D + YN ++ +A G EV R+ + + A Y T
Sbjct: 247 VEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNT 306
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
M+ K G H +AE++ + + G D+ +I G V A A+ ED+++
Sbjct: 307 MIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQ 366
Query: 373 KATTPNSWAVVAAGYFDA---GKTERGFQCMKAALSVYVEGKGWKPD 416
T +++ + Y A E + CM A G +PD
Sbjct: 367 VRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRA--------GVRPD 405
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 140/379 (36%), Gaps = 55/379 (14%)
Query: 4 KLKLSTNTQIHNAVFSRFYYTNRINKTTLYS-IISPLGNPGT--RIEPELDNWVKNGNKV 60
KLKL N +I VF T+ YS ++S G R LDN V G +
Sbjct: 658 KLKLWQNAEI---VFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQP 714
Query: 61 RVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA--VQLDLIGRVHGFLSAE 118
++ R +A E+S++ R +P V R A
Sbjct: 715 NATCANYVLEAF---GRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEAR 771
Query: 119 SYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLY 176
S + +K+ + Q + ALL Y R+ A + +K+ G+ L YN ++ LY
Sbjct: 772 SMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLY 831
Query: 177 SKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHI 233
SK G Y V M+ PD ++ I Y ++ + +LREM + P+I
Sbjct: 832 SKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNI 891
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
STY + Y + + A V K E + D YN +I++Y
Sbjct: 892 ----STYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVY----------- 936
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
K GEH + E+++++ ++ G + ++ Y
Sbjct: 937 ------------------------RKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYG 972
Query: 354 NNGLVQNAEAILEDLVEKG 372
G AE +LE L E G
Sbjct: 973 KGGATGKAEEVLETLPEIG 991
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 121/294 (41%), Gaps = 10/294 (3%)
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
Q A S + + G+ T+TYN ++ S + + EM+ + PD ++Y
Sbjct: 176 QEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYN 235
Query: 206 ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
I+ YG +E I R M+ Q D TY S H + + I++ + +
Sbjct: 236 AMISVYGRAGRVEAASSIFRIMQEQ-GFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRD 294
Query: 266 RLEQKDGIGYNFLISLYASLG--NKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEH 323
D I YN +I +Y G K+E L + E+ C + + +++ L K G
Sbjct: 295 ARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVT--FTVLIDTLGKAGFV 352
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
EA + ++ S + +A+I Y + +AE ++ G +++V+
Sbjct: 353 NEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVM 412
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
+F AG E+ KA + G G KP+ V ++ + SV ++E
Sbjct: 413 LDVFFKAGMPEKCIILYKAMV-----GSGLKPELSVYAIMVRVFYQKSSVAEIE 461
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 172/409 (42%), Gaps = 51/409 (12%)
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK 149
RKG FA H + +D + H F D K + A++ Y + +
Sbjct: 623 RKG---FAFVAHELLIDCL---HAF------------DVKDSAMHVAIIASYGKLKLWQN 664
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A FR +++ G A +T Y+ ++ Y++TG +E+ L M A + P+ +
Sbjct: 665 AEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLE 724
Query: 210 SYG-ARSDLEGMEIILR--EMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
++G A E E R EM P + T+ H + + +++A + ++ +E
Sbjct: 725 AFGRAGKAKEISEFFQRLPEMGISP----NSRTFVVIFHAFSRNGNLEEARSMYRQMKEA 780
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEE 325
+ L++LY+ + + L D++K + I+ Y M+ KLG +
Sbjct: 781 GFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDID-IYNHMISLYSKLGSYRN 839
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
A V K + G S D N +I+ Y N +VQ A+A+L ++++ G A +++ + +
Sbjct: 840 AALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLIS 899
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDP---KVITSILSKLGDEGSVQD------V 436
Y E K+ + G KPD V+ ++ K G+ +++ V
Sbjct: 900 AYGRLQAYEDAELVFKS-----IAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKV 954
Query: 437 EAFVAALRTVIPMNRQMYHAFIKANIRNGKG--VDELLDSMKADGIDED 483
+ F +L T+ H + + + G +E+L+++ G+ D
Sbjct: 955 DGFEPSLTTI--------HMLMDSYGKGGATGKAEEVLETLPEIGMSPD 995
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 125/291 (42%), Gaps = 10/291 (3%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
+L + R + + F+++ EMGI+ ++ T+ I +S+ G E+ + +MK
Sbjct: 722 VLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAG 781
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
P ++ + Y + E ++++++ + + LD Y Y K A
Sbjct: 782 FSPSIQVFKALLALYSRETVEIDAEELVKDIK-KAGLELDIDIYNHMISLYSKLGSYRNA 840
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYA--SLGNKSEVLRLWDLEKTACKRYINRDYITML 314
+ V K +E D +N LI LY+ + +++ L L ++ KT I+ Y T++
Sbjct: 841 ALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQAL-LREMIKTGNAPNIS-TYTTLI 898
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
A +L +E+AE V K +G D N +I Y G + E I+E + G
Sbjct: 899 SAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFE 958
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+ + ++ Y G T + + ++ + G PD TSI++
Sbjct: 959 PSLTTIHMLMDSYGKGGATGKAEEVLETLPEI-----GMSPDAIHYTSIIN 1004
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 83/432 (19%), Positives = 156/432 (36%), Gaps = 76/432 (17%)
Query: 103 VQLDLIGRVHGFLS-AESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
V +D +G+ GF++ A + F ++ + T Q + A++ Y + A + M
Sbjct: 341 VLIDTLGKA-GFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLR 399
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
G+ L Y+ ++ ++ K G EK + M + P+ Y I + + +S +
Sbjct: 400 AGVRPDLLAYSVMLDVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSVAE 459
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKAS-------------DVLKKAEER 266
+E + +EM + S+ + FY +A ++ K S DVL E
Sbjct: 460 IENLSKEMVQSSASLAALSSTLAKGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEAS 519
Query: 267 LEQKDGIG----------------YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+ D Y L + A G SE +T + ++ D+
Sbjct: 520 GKLSDARDLVHAVSSIEPSVAAHLYKRLAVMLAKAGRFSEAEEEMRTSQTYGQVQVS-DF 578
Query: 311 ITMLEALM-KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG------------- 356
+ +L A + G +EA + G D + ++ YC G
Sbjct: 579 LKVLVASYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCL 638
Query: 357 ----------------------LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
L QNAE + DL + G A ++++ + + Y + G E
Sbjct: 639 HAFDVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFE 698
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQM 453
R + + ++ G +P+ +L G G +++ F L + I N +
Sbjct: 699 RATRALDNMVAA-----GLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRT 753
Query: 454 YHAFIKANIRNG 465
+ A RNG
Sbjct: 754 FVVIFHAFSRNG 765
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Query: 109 GRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
GR+ + AE F ++ + + Y ++N Y + + K +MK G S
Sbjct: 902 GRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSL 961
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
T + +M Y K G K +VL + + PD Y INS+ D I LR+
Sbjct: 962 TTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRK 1021
Query: 227 M 227
M
Sbjct: 1022 M 1022
>gi|414878623|tpg|DAA55754.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
Length = 891
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 1/251 (0%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL C + + + HF+K +++G+ L + YN M Y K G + +L EM A +
Sbjct: 285 LLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLNEMMAGS 344
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ PD Y IN Y + + E + EM + +I D TY A Y + L+ K
Sbjct: 345 LVPDKIHYTCLINGYCLKGETENAWQVFEEM-LKANIKPDVVTYNILASGYSRNGLVMKV 403
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
D+L+ ++ + + + Y I+ + GN SE L+++ + IN Y +M+
Sbjct: 404 FDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYGSMVCG 463
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
+ G + A + GN D + +I G C + V A + + ++EK
Sbjct: 464 YLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEKNVVPD 523
Query: 377 PNSWAVVAAGY 387
S++ + + Y
Sbjct: 524 VISYSKLISAY 534
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 121/294 (41%), Gaps = 27/294 (9%)
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
V+LD VHGF S+ L D K Y VR+ + +S R
Sbjct: 163 GVKLD----VHGF---SSFIIGLCDCGKFDLAYNM-----VRRYAVLQEISQER------ 204
Query: 162 IALSTLTYN---DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
+ + + YN D +C K + EKV ++ T + PD +SY I+S+ +LE
Sbjct: 205 VPIEAMAYNMVIDGLCKEMKLKEAEKVLEIKTRHGSA---PDLYSYSYLIHSHCKMGNLE 261
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+ +M S I ++ A K ++ + +K + DG+ YN
Sbjct: 262 KAWYHVEDMVSHG-IEINCYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIA 320
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINR-DYITMLEALMKLGEHEEAEKVLKEWELSG 337
+ Y LGN +E ++L + E A ++ Y ++ GE E A +V +E +
Sbjct: 321 MDAYCKLGNMNEAVKLLN-EMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKAN 379
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
D N + GY NGLV ILE ++++G ++ + AG+ G
Sbjct: 380 IKPDVVTYNILASGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGG 433
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 146/359 (40%), Gaps = 51/359 (14%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MCLYSKTGQYEKVPDVLT 190
YG+++ Y+ TD A F ++ + G + L+ + + +C K G+ V ++
Sbjct: 457 YGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMML 516
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
E KN+ PD SY I++Y D+ + +M + + D Y + Y K
Sbjct: 517 E---KNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVERG--LSDVIVYTVLMNGYCKV 571
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WD---------LEKT 300
+ +A ++ + + D + Y L+ G+ E L+ W +T
Sbjct: 572 GRLQEACELFVQMINLGIKPDVVAYTVLLD-----GHLKETLQQGWQGIAKERRTFFLRT 626
Query: 301 ACKRYIN--RD---------YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
K +N +D Y +++ K EEA + E G D A+I
Sbjct: 627 KHKVLLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALI 686
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV-AAGYFDAGKTERGFQ--CMKAAL-- 404
GYC+ G + AE + ++++ KG P+ W+++ G +G+ G + + +AL
Sbjct: 687 NGYCSQGEIAKAEDLFQEMIAKG--MKPDIWSMMRVIGVPMSGRRTPGLKDCSLSSALGR 744
Query: 405 ---------SVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQM 453
SV ++ W ++ + L ++ ++ FVAA V P N+++
Sbjct: 745 QGEQNDGTFSVRIDDCQWSCANTIVAKLAVALAPMPFMRVLLDRFVAATSGVFPDNQEL 803
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 114/268 (42%), Gaps = 9/268 (3%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L+N Y + +T+ A F +M + I +TYN + YS+ G KV D+L M
Sbjct: 352 YTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNGLVMKVFDILEHMM 411
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ + P++ +Y I I + +L E++ +E + ++ Y S Y+ +
Sbjct: 412 DQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNIN-VLYGSMVCGYLHSGWT 470
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYA---SLGNKSEVLRLWDLEKTACKRYINRDY 310
D A + + ++ D + + LI+ +G S V ++ LEK I+ Y
Sbjct: 471 DHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMM-LEKNVVPDVIS--Y 527
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++ A + + A + G S D + ++ GYC G +Q A + ++
Sbjct: 528 SKLISAYCQTRDMHNARLWFHDMVERGLS-DVIVYTVLMNGYCKVGRLQEACELFVQMIN 586
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQ 398
G ++ V+ G+ ++G+Q
Sbjct: 587 LGIKPDVVAYTVLLDGHLKE-TLQQGWQ 613
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 153/383 (39%), Gaps = 52/383 (13%)
Query: 151 LSHFRK--------MKEMGIALSTLTYNDIMCLYSKTGQYEKVPD------VLTEMKAKN 196
+ H RK M EMG+ L ++ + G+++ + VL E+ +
Sbjct: 145 IDHLRKTCATSHVGMIEMGVKLDVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQER 204
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ + +Y + I+ L+ E +L E++++ D +Y+ H + K ++KA
Sbjct: 205 VPIEAMAYNMVIDGLCKEMKLKEAEKVL-EIKTRHGSAPDLYSYSYLIHSHCKMGNLEKA 263
Query: 257 SDVLKKAEERLEQKDGIGYN-----FLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
E+ + GI N +L+ LG SEV+ + + Y
Sbjct: 264 ---WYHVEDMVSH--GIEINCYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYN 318
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII-GYCNNGLVQNAEAILEDLVE 370
++A KLG EA K+L E ++G+ +I +I GYC G +NA + E++++
Sbjct: 319 IAMDAYCKLGNMNEAVKLLNEM-MAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLK 377
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
++ ++A+GY G + F ++ + +G +P+ ++
Sbjct: 378 ANIKPDVVTYNILASGYSRNGLVMKVFDILEHMMD-----QGLEPNSLTYGIAIAGFCRG 432
Query: 431 GSVQDVEAF--VAALRTVIPMN----------------RQMYHAFIKANIRNGKGVDELL 472
G++ + E + R + +N Y F++ + G VD L
Sbjct: 433 GNLSEAEVLFNIVEERGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVA-KQGNMVDRLS 491
Query: 473 DSMKADGIDEDEETKEI-LVCTM 494
S +G+ DE+ E VC M
Sbjct: 492 CSKLINGLCRDEKVGEASTVCKM 514
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 171/400 (42%), Gaps = 50/400 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG ++N ++ D ALS +KM++ I + + YN I+ K + D+ +M
Sbjct: 223 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKM 282
Query: 193 KAKNIFPDNFSYR---ICINSYGARSDLEGMEIILREMESQPHIVL-------------- 235
+ K I PD F+Y C+ +YG SD + + E + P++V
Sbjct: 283 ETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKL 342
Query: 236 -----------------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+ TY S + + + +D+A + + D + YN L
Sbjct: 343 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 402
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYI---NRDYITMLEALMKLGEHEEAEKVLKEWEL 335
I + E + L+ + +R + Y T+++ L + G+ + A+K+ K+
Sbjct: 403 IKGFCKAKRVEEGMELF---REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 459
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G D + ++ G C G ++ A + E L + ++ ++ G AGK E
Sbjct: 460 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVED 519
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT--VIPMNRQM 453
G+ + +LS+ KG KP+ + T+++S +G ++ +A ++ +P +
Sbjct: 520 GWD-LFCSLSL----KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP-DSGC 573
Query: 454 YHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
Y+ I+A +R+G EL+ M++ G D T +++
Sbjct: 574 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 613
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 131/311 (42%), Gaps = 46/311 (14%)
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMG-----IALSTLT--------YNDIMCLYS 177
+ TY LLNC+ R+ Q AL+ KM ++G + LS+L ++ + L
Sbjct: 116 HYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 175
Query: 178 KTGQYEKVPDVLT----------------------EMKAKNIFPDNFSYRICINSYGARS 215
+ + PD +T M A+ PD F+Y +N R
Sbjct: 176 QMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 235
Query: 216 DLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
D++ +L++ME + I + Y + K +D A D+ K E + + D Y
Sbjct: 236 DIDLALSLLKKME-KGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 294
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKE 332
N LIS + G S+ RL +R IN + +T +++A K G+ EAEK+
Sbjct: 295 NSLISCLCNYGRWSDASRLL---SDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD- 350
Query: 333 WELSGNSYDTRIP--NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
E+ S D I N++I G+C + + A+ I +V K ++ + G+ A
Sbjct: 351 -EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKA 409
Query: 391 GKTERGFQCMK 401
+ E G + +
Sbjct: 410 KRVEEGMELFR 420
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 9/242 (3%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ LL+ + + D +S +M+ +GI + TY+ ++ + + Q VL +M
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMM 143
Query: 194 AKNIFPDNFSYRICINSY--GAR-SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
PD + +N Y G R S+ + + EM +P D T+ + H
Sbjct: 144 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKP----DTVTFNTLIHGLFLH 199
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRD 309
N +A ++ + R Q D Y +++ G+ L L +EK + +
Sbjct: 200 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANV-VI 258
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+++ L K ++A + + E G D N++I CN G +A +L D++
Sbjct: 259 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMI 318
Query: 370 EK 371
E+
Sbjct: 319 ER 320
>gi|302810470|ref|XP_002986926.1| hypothetical protein SELMODRAFT_125134 [Selaginella moellendorffii]
gi|300145331|gb|EFJ12008.1| hypothetical protein SELMODRAFT_125134 [Selaginella moellendorffii]
Length = 458
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 116/267 (43%), Gaps = 4/267 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ Q +A M GI + +TYN I+ Y+K G +K+ D+ +M
Sbjct: 130 TYSLLIKSCCDCGQLSRAADLLADMTARGIQPNRVTYNIILDAYAKCGSLDKLHDLALQM 189
Query: 193 ---KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ + PD++S + +G R D+ ME + + + P D T S Y K
Sbjct: 190 LQSPSPSCRPDHWSRNAIVKGFGNRGDIRRMEEWFQRLTT-PSDGPDSLTLHSLMAAYAK 248
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A + DK V++ Q D + YN LI+ Y G K+++L+ + K R +
Sbjct: 249 AEMFDKMHAVVRYIHRYHYQVDAVTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPDSVT 308
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T++ K G + ++L++ + DT + N+V+ Y + + + +
Sbjct: 309 YCTLINFYGKFGMQRKLPRLLEQMSMHKVQPDTALYNSVLDAYRRASDISSIDRYFAAMQ 368
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERG 396
E+G ++ ++ Y G T++
Sbjct: 369 EQGCKPDHLTYNILIQAYRSQGLTDKA 395
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N Y R + + L F MK G+ ++TY ++ Y K G K+P +L +M
Sbjct: 273 TYNILINAYGRAGRKTQMLKTFTSMKCGGVRPDSVTYCTLINFYGKFGMQRKLPRLLEQM 332
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD Y +++Y SD+ ++ M+ Q D TY Y L
Sbjct: 333 SMHKVQPDTALYNSVLDAYRRASDISSIDRYFAAMQEQ-GCKPDHLTYNILIQAYRSQGL 391
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISL 281
DKA DV+ +E+L+Q+D I F+ SL
Sbjct: 392 TDKA-DVMAVEQEKLKQRDSINRLFVSSL 419
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 59/334 (17%), Positives = 137/334 (41%), Gaps = 19/334 (5%)
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI-ILRE 226
TY ++ + K + ++ + M A P ++ +++Y RS+L + +L+
Sbjct: 59 TYIRMLEMLGKCKRPDEAASLFQTMLADGCGPSREAFTALMSAY-TRSNLMSTAMEVLQA 117
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
M + PH D TY+ + +A+D+L R Q + + YN ++ YA G
Sbjct: 118 MNATPHCSPDVFTYSLLIKSCCDCGQLSRAADLLADMTARGIQPNRVTYNIILDAYAKCG 177
Query: 287 NKSEV----LRLWDLEKTACKR-YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+ ++ L++ +C+ + +R+ I ++ G+ E+ + + D
Sbjct: 178 SLDKLHDLALQMLQSPSPSCRPDHWSRNAI--VKGFGNRGDIRRMEEWFQRLTTPSDGPD 235
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+ ++++ Y + A++ + ++ ++ Y G+ R Q +K
Sbjct: 236 SLTLHSLMAAYAKAEMFDKMHAVVRYIHRYHYQVDAVTYNILINAY---GRAGRKTQMLK 292
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV--AALRTVIPMNRQMYHAFIK 459
S ++ G +PD ++++ G G + + + ++ V P + +Y++ +
Sbjct: 293 TFTS--MKCGGVRPDSVTYCTLINFYGKFGMQRKLPRLLEQMSMHKVQP-DTALYNSVLD 349
Query: 460 ANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
A R +D +M+ G D T IL+
Sbjct: 350 AYRRASDISSIDRYFAAMQEQGCKPDHLTYNILI 383
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 160/375 (42%), Gaps = 30/375 (8%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y ALL+ ++++ D+AL+ +M++ G + +TYN ++ K + ++ ++ MK
Sbjct: 82 YTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMK 141
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREM----------ESQPHIVLDWSTYASA 243
+ P +Y ++ LE + +EM P+++ TY+
Sbjct: 142 SVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVI----TYSVL 197
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
KAN + +A ++L+ + R D I Y L+ L +S+V W++ +
Sbjct: 198 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVD---GLCKESKVAAAWEVLREMLD 254
Query: 304 RYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
+ +T +L L + +A ++++ G + + +I G C G V++
Sbjct: 255 AGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKD 314
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
A A+L D+++KG + ++ G A + + ++ A+S G KPD
Sbjct: 315 ACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS-----GGIKPDVVTY 369
Query: 421 TSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVDELLD---SMK 476
+S++ L + + + +++ P + +Y I + GK VDE D M
Sbjct: 370 SSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGK-VDEAFDLYEVMA 428
Query: 477 ADGIDEDEETKEILV 491
DG D D T L+
Sbjct: 429 GDGCDADVVTYSTLI 443
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 155/374 (41%), Gaps = 12/374 (3%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L K R SQA+E+ + M +G C + + +D + + +A + D
Sbjct: 197 LIDGLCKANRVSQAVELLESMKARG-CSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 255
Query: 128 E--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
TY +LL+ R R+ AL+ R M G + +TY ++ K G+ +
Sbjct: 256 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 315
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYAS 242
+L +M K PD Y + IN ++ +LR S +P +V TY+S
Sbjct: 316 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVV----TYSS 371
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTA 301
+ ++N +D+A +L + R D I Y+ LI G E L++ +
Sbjct: 372 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDG 431
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
C + Y T+++ L K G +EA +L G T N++I G C+ + A
Sbjct: 432 CDADVVT-YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEA 490
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
++E++ A + ++ ++ G + + ++ A + V G D +
Sbjct: 491 IELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYS 550
Query: 422 SILSKLGDEGSVQD 435
S++ L G V +
Sbjct: 551 SLIDGLCKAGRVAE 564
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 128/325 (39%), Gaps = 20/325 (6%)
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG-ARSDLEGMEIILRE 226
TY ++ + + G+ ++ EM++KN+ P+ F I I+ A+ ++ + R
Sbjct: 11 TYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR-CFRA 69
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
M+ IV D Y + K +D+A +L + + + + + YN LI
Sbjct: 70 MQGS-GIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNN 128
Query: 287 NKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEW-ELSGNSYDTRI- 344
L++ K+ Y T+L+ L + G+ E A + +E + + D R
Sbjct: 129 EPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCS 188
Query: 345 PNAV-----IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC 399
PN + I G C V A +LE + +G + ++ ++ G K ++
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV--AALRTVIPMNRQMYHAF 457
++ L G P+ S+L L V D A + R P N Y
Sbjct: 249 LREMLDA-----GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTP-NVVTYGTL 302
Query: 458 IKANIRNGKGVDELLDSMKADGIDE 482
I + G+ D +M AD ID+
Sbjct: 303 IDGLCKVGRVKDAC--AMLADMIDK 325
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 66/151 (43%), Gaps = 4/151 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ + + D+A +M MG ST+TYN ++ ++ +++ EM
Sbjct: 438 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 497
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP----HIVLDWSTYASAAHFYI 248
+ N P +Y I I+ ++ ++L + +++ LD Y+S
Sbjct: 498 ERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLC 557
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
KA + +A D ++ + D I Y+ L+
Sbjct: 558 KAGRVAEALDYFQEMIDNGVIPDHITYSILL 588
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 158/366 (43%), Gaps = 17/366 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +++ Y + KAL M+ G+ + TYN I+ L K G+ + VL EM
Sbjct: 295 SYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREM 354
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ I PDN Y I+ + + EM S+ I D+ TY + + +
Sbjct: 355 MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK-ISPDYITYTTLIQGFGQGGK 413
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ + ++ + R + D + Y LI +Y G E++ + L + + + +T
Sbjct: 414 VIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAG---EMVNAFSLHNEMVQMGMTPNIVT 470
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+++ L K GE + A ++L E G + I N+++ G C G ++ A +++++
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G ++ V Y G ++ + ++ L +G +P +++
Sbjct: 531 VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLD-----RGLQPTVVTFNVLMNGFCM 585
Query: 430 EGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKAN-IRNGKG-VDELLDSMKADGIDEDEE 485
G ++D + + + + ++P + Y+ +K + IRN ++ M+ G+ D
Sbjct: 586 LGMLEDGDRLLGWMLEKGIVP-DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSN 644
Query: 486 TKEILV 491
T IL+
Sbjct: 645 TYNILI 650
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 137/313 (43%), Gaps = 13/313 (4%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
LK DE TY T L++ Y + + A S +M +MG+ + +TY ++ K G+ +
Sbjct: 429 LKPDEVTYTT---LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
++L EM+ K + + Y +N ++E +++EME I D TY +
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG-IDPDAITYTTV 544
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL--WDLEKTA 301
Y + IDKA +L++ +R Q + +N L++ + LG + RL W LEK
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
I Y T+++ K+ K G + D+ N +I G+C ++ A
Sbjct: 605 VPDAIT--YNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEA 662
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
+ ++++EKG T S+ + ++ K + + + G G D ++
Sbjct: 663 WFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEE-----MRGHGLVADGEIYN 717
Query: 422 SILSKLGDEGSVQ 434
+ +EG V+
Sbjct: 718 FFVDMCYEEGDVE 730
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 144/377 (38%), Gaps = 56/377 (14%)
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL- 217
E GI+ +T +YN I+ + G+ ++ +L +M ++ PD SY I+ Y +L
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 218 ------EGMEI----------------------------ILREMESQPHIVLDWSTYASA 243
+ M+I +LREM SQ I+ D Y +
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK-IIPDNVVYTTL 369
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
H + K + A+ K +E L +K Y +L G +V+ +L
Sbjct: 370 IHGFFKLGHVRTAN---KWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS 426
Query: 304 RYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
R + D Y T+++ K GE A + E G + + A+I G C +G +
Sbjct: 427 RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDT 486
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
A +L+++ +KG + + G AG E+ + MK +E G PD
Sbjct: 487 ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKE-----MEVAGIDPDAITY 541
Query: 421 TSILSKLGDEGSVQDVEAFVAAL------RTVIPMNRQMYHAFIKANIRNGKGVDELLDS 474
T+++ G + + + TV+ N M + + +G D LL
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDG---DRLLGW 598
Query: 475 MKADGIDEDEETKEILV 491
M GI D T L+
Sbjct: 599 MLEKGIVPDAITYNTLM 615
>gi|255576798|ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531275|gb|EEF33118.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 191/435 (43%), Gaps = 57/435 (13%)
Query: 48 PELDNWVKN-GNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLD 106
P+LD+ ++ G ++ +L I+R+L K+ R+ ++ DWM + + + +
Sbjct: 97 PDLDSALRRLGAILKAQDLNVILRNLGKQSRWQDLSKLFDWMQQHS--KISVSSYTSYMK 154
Query: 107 LIGRVHGFLSAESYFSNLKDDEKTYQTY--GALLNCYVRQRQTDKALSHFRKMKEMGIAL 164
+G+ A ++++ D+ + ++L+C VR + D +L F KMK+ G+
Sbjct: 155 FMGKSLNPAKALEIYNSIADESVKNNVFICNSVLSCLVRSGKFDISLKLFHKMKQNGLTP 214
Query: 165 STLTYNDIM--CLYSKTGQYEKVPDVLTEMK--------------------------AKN 196
T+TY+ ++ C+ +K G Y K D + E+K A++
Sbjct: 215 DTITYSTLLSGCIKAKDG-YSKTLDFVQELKYNGLQMDTVIYGTILAVCASHNRCEEAES 273
Query: 197 IF---------PDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAA 244
F P+ F Y +N+Y + + + E ++++M+S P+ V+ W+T
Sbjct: 274 YFSQMKNEGHLPNVFHYSSLLNAYASSGNYKKAEELVQDMKSLGLVPNKVI-WTTLLKV- 331
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
Y++ L +K+ +L + E +D + Y L+ + G E +D K +
Sbjct: 332 --YVRGGLFEKSQQLLLELETLGYAEDEMPYCLLMDGLSKAGRVDEARSFFDEMKEKNVK 389
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y M+ A + EEA+++ KE+E + YD I N ++ YC G +++
Sbjct: 390 SDGYAYSIMISAYCRGRLLEEAKQLAKEFEAKYDKYDVVILNTMLCAYCRAGDMESVMQT 449
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+ + E + + ++ ++ + +Q M+ + KG +P+ ++ + ++
Sbjct: 450 MRKMDELAISPSYCTFHILIKYFCKQKLYLLAYQTMED-----MHRKGHQPEEELCSMLI 504
Query: 425 SKLGDEGSVQDVEAF 439
LG + EAF
Sbjct: 505 FHLGKAKAY--TEAF 517
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 164/382 (42%), Gaps = 49/382 (12%)
Query: 69 IRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE 128
I DL K+ R +A++V D M ++G+ E
Sbjct: 227 IDDLCKKGRIGKAVKVKDIMVQRGL----------------------------------E 252
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
TY L+NC ++ +AL+ +M + G+A +TYN ++ S + + +
Sbjct: 253 PNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGL 312
Query: 189 LTEMKAKNIF--PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
L EM + PD ++ I+ + I +REM ++ + + TY
Sbjct: 313 LEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMR-QAISVREMMAERGCMCNLVTYNYLIGG 371
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
+++ + ++ A +++ + + D Y+ LI+ ++ L EV R +T +R I
Sbjct: 372 FLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLW---EVDRAEMFLRTMTQRGI 428
Query: 307 NRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ YI +L AL +LG E+A + E +++ D + ++ G C +G ++ A+
Sbjct: 429 RAELFHYIPLLAALCQLGMMEQAMVLFNEMDMN-CGLDAVAYSTMMYGACKSGDIKAAKQ 487
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
+L+D++++G A +++++ + G E + +K + G+ PD V S+
Sbjct: 488 LLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLK-----QMAASGFVPDVAVFDSL 542
Query: 424 LSKLGDEGSVQDVEAFVAALRT 445
+ EG + + + +R
Sbjct: 543 IKGYSAEGQINKILDLIHEMRA 564
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 147/336 (43%), Gaps = 17/336 (5%)
Query: 51 DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGR 110
D V+ G + V +I L K +AL + + M+ KG+ AP D LI
Sbjct: 244 DIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGV---AP-DVVTYNTLIAG 299
Query: 111 VHGFLSAESYFSNLKD-------DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
+ G L + L++ E T+ ++++ + + +A+S M E G
Sbjct: 300 LSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCM 359
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII 223
+ +TYN ++ + + + ++++E+ + + PD+F+Y I IN + +++ E+
Sbjct: 360 CNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMF 419
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
LR M +Q I + Y + ++++A + + + D + Y+ ++
Sbjct: 420 LRTM-TQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNC-GLDAVAYSTMMYGAC 477
Query: 284 SLGNKSEVLRLWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
G+ +L L++ + Y ++ KLG+ EEAE+VLK+ SG D
Sbjct: 478 KSGDIKAAKQLLQDMLDEGLAPDAVT--YSILINMFAKLGDLEEAERVLKQMAASGFVPD 535
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
+ +++I GY G + ++ ++ K A P
Sbjct: 536 VAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAIDP 571
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 128/319 (40%), Gaps = 17/319 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y ++ R+TD+A++ R M+ G+ +TY ++ + + ++L EM
Sbjct: 117 SYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEM 176
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P+ Y + Y + + + EM S+ + D + K
Sbjct: 177 CGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEM-SRLGVEPDVIMFTGFIDDLCKKGR 235
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL--EKTACKRYINRDY 310
I KA V +R + + + YN LI+ G+ E L L + +K + Y
Sbjct: 236 IGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVT--Y 293
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSY---DTRIPNAVIIGYCNNGLVQNAEAILED 367
T++ L + E + A +L+E + G++ D N+VI G C G ++ A ++ E
Sbjct: 294 NTLIAGLSGVLEMDGAMGLLEEM-IQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREM 352
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ E+G ++ + G+ K M +S G +PD + +++
Sbjct: 353 MAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELIS-----SGLEPDSFTYSILINGF 407
Query: 428 GDEGSVQDVEAFVAALRTV 446
V E F LRT+
Sbjct: 408 SKLWEVDRAEMF---LRTM 423
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 131/285 (45%), Gaps = 26/285 (9%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ + + D+ FR+M+ +TYN ++ + G+ +++ M
Sbjct: 221 TYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGM 280
Query: 193 --KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFY 247
K + + P+ +Y I Y + ++E ++L EM S +P+++ TY +
Sbjct: 281 GKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMI----TYNTLVKGL 336
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIG-----YNFLISLYASLGNKSEVLRLWDLEKTAC 302
+A+ +DK DVL ER++ G +N +I L+ GN E L++++ K
Sbjct: 337 CEAHKLDKMKDVL----ERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFR 392
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVL-----KEWELS--GNSYDTRIPNAVIIGYCNN 355
+ Y T++ +L + G+++ AE++ KE LS G+ N + C +
Sbjct: 393 IPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEH 452
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCM 400
G + AE ++ L+++G P S+ V G+ G E G++ +
Sbjct: 453 GKTKKAERVIRQLMKRG-TQDPQSYTTVIMGHCKEGAYESGYELL 496
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/409 (18%), Positives = 151/409 (36%), Gaps = 89/409 (21%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++R LR K S+AL W +KG P + + L+++GR A ++ +++
Sbjct: 81 VLRTLRLIKDPSKALRFFKWTQQKGFS-HTPESYFIMLEILGRERNLNVARNFLFSIEKH 139
Query: 128 EKTY-----QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
K + + +L+ Y +++ F+ MK + ++ S +T+N +M + K G+
Sbjct: 140 SKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRT 199
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
+V EM + +YG D +++R
Sbjct: 200 NMAKEVYDEM---------------LGTYGVSPDTCTYNVLIRG---------------- 228
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
+ K +++D+ ++ E D + YN
Sbjct: 229 ----FCKNSMVDEGFRFFREMESFNCDADVVTYN-------------------------- 258
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV-----IIGYCNNGL 357
T+++ L + G+ A ++ G + PN V I GYC
Sbjct: 259 ---------TLVDGLCRAGKVRIARNLVNGM---GKKCEGLNPNVVTYTTLIRGYCMKQE 306
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP 417
V+ A +LE++ +G ++ + G +A K ++ MK L G+ PD
Sbjct: 307 VEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDK----MKDVLERMKSDGGFSPDT 362
Query: 418 KVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNG 465
+I+ G++ + ++ F + + IP + Y I++ + G
Sbjct: 363 FTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKG 411
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/312 (18%), Positives = 130/312 (41%), Gaps = 36/312 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ Y +++ ++AL +M G+ + +TYN ++ + + +K+ DVL M
Sbjct: 293 TYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERM 352
Query: 193 KAKNIF-PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K+ F PD F++ I+ + +L+ + M+ + I D ++Y++ +
Sbjct: 353 KSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMK-KFRIPADSASYSTLIRSLCQKG 411
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
D A + + E+ L+S + S + + Y
Sbjct: 412 DYDMAEQLFDELFEK---------EILLSKFGS-------------------KPLAASYN 443
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+ E+L + G+ ++AE+V+++ G + D + VI+G+C G ++ +L ++ +
Sbjct: 444 PIFESLCEHGKTKKAERVIRQLMKRG-TQDPQSYTTVIMGHCKEGAYESGYELLMWMLRR 502
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
+ + G+ K + ++ L ++P S+L+KL ++G
Sbjct: 503 DFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLK-----SSYQPKTSTWHSVLAKLLEKG 557
Query: 432 SVQDVEAFVAAL 443
+ + +
Sbjct: 558 CAHESSCVIVMM 569
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 134/311 (43%), Gaps = 8/311 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +L Y + D+ALSHFR +M + + TY ++ + + ++ +L EM
Sbjct: 61 THNTILKAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEM 118
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K+ PD Y I ++ +L+ M + V D TY S + N
Sbjct: 119 IQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLER-SCVPDVITYTSLIVGCCQTNA 177
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+D+A +++K +E D + YN L++ EV +L + A + Y T
Sbjct: 178 LDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNT 237
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ L + G++EEA K+L++ D N+++ G+C + AE +LED+V +
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
A T ++ + G+ A + ++ M+ G PD +L L G
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKA-----GISPDLVTYNCLLDGLCKAGK 352
Query: 433 VQDVEAFVAAL 443
+++ + +
Sbjct: 353 LEEAHELLEVM 363
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 150/356 (42%), Gaps = 27/356 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+ + D+A KMKE G+ T+ YN ++ K Q E+V +L EM
Sbjct: 164 TYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEM 223
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
PD FSY + E IL +M + P +V TY S + K
Sbjct: 224 VEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVV----TYNSLMDGFCK 279
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINR 308
+ +D+A +L+ R I Y LI ++ ++ R+ D+ K I+
Sbjct: 280 VSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAG----ISP 335
Query: 309 DYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
D +T +L+ L K G+ EEA ++L+ + D + ++ G C G V +A +L
Sbjct: 336 DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLL 395
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
E ++E+G ++ + G+ AGK + G + ++ V PD ++++
Sbjct: 396 EMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV-----SCTPDVVTYSTLID 450
Query: 426 KLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADG 479
+QD A + I ++ Y + ++ GK E++D M G
Sbjct: 451 GYCKANRMQDAFAILG-----ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQG 501
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 154/368 (41%), Gaps = 29/368 (7%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y ALLN +Q Q ++ +M E G T +YN ++ ++G+YE+ +L +M
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIKA 250
K PD +Y ++ + S ++ E +L +M P ++ TY + + +A
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVI----TYTTLIGGFSRA 315
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINR 308
+ + A V++ + D + YN L+ G E L + +EK +
Sbjct: 316 DRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVT- 374
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ L KLG+ ++A +L+ G + N +I G+C G V +LE
Sbjct: 375 -YSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLE-- 431
Query: 369 VEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ K + TP+ +++ + GY A + + F + G PD +S+L
Sbjct: 432 LMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL-----------GISPDKASYSSMLEG 480
Query: 427 LGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIK--ANIRNGKGVDELLDSMKADGIDED 483
L G V++ + + + + P Y I ++ G ++L M G + +
Sbjct: 481 LCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPN 540
Query: 484 EETKEILV 491
T IL+
Sbjct: 541 LYTYSILI 548
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 161/414 (38%), Gaps = 78/414 (18%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQL--DLIGRVHGFLSAESYF 121
E +I+ + ++K + + M+ G C + D A +L D++GR
Sbjct: 250 EAGKILEKMIEKKCGPDVVTYNSLMD--GFCKVSKMDEAERLLEDMVGRRCA-------- 299
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEM---GIALSTLTYNDIMCLYSK 178
T TY L+ + R D+ +R M++M GI+ +TYN ++ K
Sbjct: 300 -------PTVITYTTLIGGFSR---ADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCK 349
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVL 235
G+ E+ ++L M K+ PD +Y I +N ++ ++L M QP++V
Sbjct: 350 AGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLV- 408
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
T+ + + KA +D+ VL+ +E D + Y+ LI Y + +
Sbjct: 409 ---TFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL 465
Query: 296 DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN- 354
+ Y +MLE L G+ EEA++V+ G + +I G C+
Sbjct: 466 GISPD------KASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDV 519
Query: 355 -----------------------------NGL-----VQNAEAILEDLVEKGKATTPNSW 380
NGL V++A +L+ ++EKG ++
Sbjct: 520 ERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATY 579
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
+ G+ K + +QC K + G +PD ++S G+V+
Sbjct: 580 TSLIDGFCKINKMDAAYQCFKT-----MRDSGCEPDKLAYNILISGFCQSGNVE 628
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 137/326 (42%), Gaps = 14/326 (4%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
KD Y L+ + + D A + + M E +TY ++ +T ++
Sbjct: 121 KDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDE 180
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYA 241
++ +MK + PD +Y +N ++ LE + +L EM +P D +Y
Sbjct: 181 ARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREP----DTFSYN 236
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKT 300
+ ++ ++A +L+K E+ D + YN L+ + + E RL D+
Sbjct: 237 TVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGR 296
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
C + Y T++ + +A +V+++ +G S D N ++ G C G ++
Sbjct: 297 RCAPTVIT-YTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEE 355
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
A +LE +VEK A +++++ G GK + + L + +E +G +P+
Sbjct: 356 AHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDA----RLLLEMMLE-RGCQPNLVTF 410
Query: 421 TSILSKLGDEGSVQDVEAFVAALRTV 446
+++ G V + + ++ V
Sbjct: 411 NTMIDGFCKAGKVDEGHKVLELMKEV 436
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 11/236 (4%)
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE-GMEII 223
S TY ++ +S+ G + V ++ EM A+ PD ++ + +Y DL+ +
Sbjct: 23 SNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHF 82
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
+M P TY H + ID+A +L + ++ D YN LI+
Sbjct: 83 RGKMWCSPTAF----TYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138
Query: 284 SLGN---KSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
+G VL++ LE++ I Y +++ + +EA K++++ + SG +
Sbjct: 139 KMGKIDAARNVLKMM-LERSCVPDVIT--YTSLIVGCCQTNALDEARKLMEKMKESGLTP 195
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
DT NA++ G C ++ +LE++VE G+ S+ V A ++GK E
Sbjct: 196 DTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEA 251
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 121/307 (39%), Gaps = 14/307 (4%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
KD TY L+N + + D A M E G + +T+N ++ + K G+ ++
Sbjct: 366 KDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDE 425
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
VL MK + PD +Y I+ Y + ++ IL I D ++Y+S
Sbjct: 426 GHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL-------GISPDKASYSSML 478
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACK 303
+++A +V+ ++ Y +I + E L++ + + C+
Sbjct: 479 EGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCE 538
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ Y ++ L K E+A VL G D ++I G+C + A
Sbjct: 539 PNL-YTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQ 597
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
+ + + G ++ ++ +G+ +G E+ + M+ L KG PD S+
Sbjct: 598 CFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLE-----KGCNPDAATYFSL 652
Query: 424 LSKLGDE 430
+ L E
Sbjct: 653 MRSLTTE 659
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 156/339 (46%), Gaps = 15/339 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+N ++ + A F ++++ G+ + +++N ++ Y K+G E+ + M
Sbjct: 234 TFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVM 293
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ +FPD F+Y I+ LE + +EM + +V + T+ + + K
Sbjct: 294 EEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDR-GLVPNDVTFTTLINGQCKNGR 352
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
+D A ++ ++ + + D + YN LI G E R + E T KR + D
Sbjct: 353 VDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREA-RKFVGEMT--KRGLIPDKFT 409
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+L+ K G+ E A ++ KE G D A+I G C +G + +AE L +++
Sbjct: 410 YTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREML 469
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G ++ +V G+ G + GF+ +K ++ G P +++ L
Sbjct: 470 RAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKE-----MQSDGHIPGVITYNVLMNGLCK 524
Query: 430 EGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNGK 466
+G V++ + + A+ V+P + Y+ ++ + ++GK
Sbjct: 525 QGQVKNADMLLNAMLNLGVVP-DDITYNILLQGHCKHGK 562
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 29/279 (10%)
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER-------------LEQKDGI 273
+ S P +Y S HF I + +A +L R LE K +
Sbjct: 100 LSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASILETKGTL 159
Query: 274 GYNF----LISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
+F L+S+Y G S+ ++ + L K + +LE ++K+ A +
Sbjct: 160 SSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEF 219
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
E SG + N ++ C G V++A+ I +++ + G T S+ + GY
Sbjct: 220 YLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCK 279
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVI 447
+G E GF+ L + +E PD ++++ L E ++D + R ++
Sbjct: 280 SGNLEEGFR-----LKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLV 334
Query: 448 PMNRQMYHAFIKANIRNGKGVD---ELLDSMKADGIDED 483
P N + I +NG+ VD E+ M G+ D
Sbjct: 335 P-NDVTFTTLINGQCKNGR-VDLALEIYQQMFTKGLKAD 371
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 7/130 (5%)
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
+ LK D+ TY +++ + ++ ++M+ G +TYN +M K GQ
Sbjct: 471 AGLKPDDGTYT---MVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQ 527
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
+ +L M + PD+ +Y I + + L + + EM +V D+++Y
Sbjct: 528 VKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEMG----LVSDYASYR 583
Query: 242 SAAHFYIKAN 251
S H KA+
Sbjct: 584 SLLHELSKAS 593
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 152/361 (42%), Gaps = 17/361 (4%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E TY +++ ++R+ D++ +M E G+ S +TYN ++ Y + G+ E +
Sbjct: 351 EPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALE 410
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQ--PHIVLDWSTYASAA 244
+L M++ N P+ +Y I + R + + M ++ + +ES+ P +V TY S
Sbjct: 411 ILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLV----TYNSLI 466
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
H KA D A +L +E D Y+ I E L++ K +
Sbjct: 467 HVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIK 526
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y +++ K G+ +EA +L+ ++ N++I G C G VQ ++
Sbjct: 527 ANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSM 586
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+E++ + G T ++ ++ G + + +S G KPD T+ +
Sbjct: 587 VENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSF-----GHKPDVYTYTAFI 641
Query: 425 SKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGI 480
G+V++ E +A + V+P + Y I A R G D +L M G
Sbjct: 642 HTYCTSGNVKEAEGMMARMIEAGVMP-DSLTYTLLISAYERLGLAYDAFNVLKRMLDAGC 700
Query: 481 D 481
D
Sbjct: 701 D 701
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 154/403 (38%), Gaps = 29/403 (7%)
Query: 111 VHGFLSAE------SYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+HG A S F +++D+ T +TY +++ + + + F +M+E
Sbjct: 291 IHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSC 350
Query: 163 ALSTLTYN---DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
+ TY D MC K + ++ L EM K + P +Y I Y +E
Sbjct: 351 EPNVHTYTVMVDAMCKERKLDESRRI---LNEMMEKGLVPSVVTYNALIRGYCEEGRIEA 407
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
IL MES + + TY + K + KA +L K E + YN LI
Sbjct: 408 ALEILGLMESN-NCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLI 466
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
+ G+ +L DL K Y ++ L K EEA + + G
Sbjct: 467 HVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIK 526
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC 399
+ + A+I G+C G + A ++LE + + +++ + G GK + G
Sbjct: 527 ANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSM 586
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ----MYH 455
++ + G KP T ++ ++ EG D + ++ + Y
Sbjct: 587 VEN-----MSKMGVKPTVATYTILIEEMLREG---DFDHANRVFNQMVSFGHKPDVYTYT 638
Query: 456 AFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILVCTMEK 496
AFI +G K + ++ M G+ D T +L+ E+
Sbjct: 639 AFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYER 681
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/346 (17%), Positives = 140/346 (40%), Gaps = 11/346 (3%)
Query: 155 RKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR 214
R ++ LS +YN+++ + ++ +++ V TEM I P+ ++ +N+Y
Sbjct: 168 RDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKM 227
Query: 215 SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
++ + + ++ Q + D TY S Y + N ++ A V + +++ +
Sbjct: 228 GNIVEANLYVSKI-FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVS 286
Query: 275 YNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEW 333
Y +I G E + L+ + + C + R Y ++ AL + E + E
Sbjct: 287 YTTIIHGLCEAGRIDEGISLFKKMREDDCYPTV-RTYTVIIHALFGNDRNLEGMDLFNEM 345
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
+ ++ C + + IL +++EKG + ++ + GY + G+
Sbjct: 346 RERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRI 405
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA-ALRTVIPMNRQ 452
E + + +E +P+ + ++ V ++ L + + +
Sbjct: 406 EAALEILGL-----MESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLV 460
Query: 453 MYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETKEILVCTMEK 496
Y++ I + G +LLD +K +G+ D+ T + + T+ K
Sbjct: 461 TYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCK 506
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 4/215 (1%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTY 131
K F A ++ D + G+ V ++V +D + + A F++LK+ +
Sbjct: 471 KAGHFDSAYKLLDLLKENGL-VPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANE 529
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
Y AL++ + + + D+A+S +M ++ TYN ++ K G+ ++ ++
Sbjct: 530 VMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVEN 589
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M + P +Y I I D + + +M S H D TY + H Y +
Sbjct: 590 MSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKP-DVYTYTAFIHTYCTSG 648
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
+ +A ++ + E D + Y LIS Y LG
Sbjct: 649 NVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLG 683
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 105/239 (43%), Gaps = 7/239 (2%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ ++Y LL R D+ + +M I + T N ++ YSK G + +
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYV 237
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+++ + PD+F+Y I Y +D+ + M ++ + +Y + H +
Sbjct: 238 SKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNK-GCRRNEVSYTTIIHGLCE 296
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS--EVLRLW-DLEKTACKRYI 306
A ID+ + KK E Y +I +A GN E + L+ ++ + +C+ +
Sbjct: 297 AGRIDEGISLFKKMREDDCYPTVRTYTVII--HALFGNDRNLEGMDLFNEMRERSCEPNV 354
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+ Y M++A+ K + +E+ ++L E G NA+I GYC G ++ A IL
Sbjct: 355 H-TYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEIL 412
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 139/306 (45%), Gaps = 11/306 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N V ++ + + +M + GIA +T ++N ++ +++T + + M
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180
Query: 193 KAKNIFPDNFSYRICINSYG-ARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K K PD ++ I ++ A D + E + EM + + D + + + +KA
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFE-VFHEMMAMGFVPPDRALHTAMVRTLLKAK 239
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRD 309
+ +A +V + E+ D I YN +I A G+ E L++ D L K +
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT-- 297
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ +L K G E AE++ + SG ++ I ++I G+ +G ++ A ++ +++V
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E G + V+ G +G E+ + + + G KP+ T+I+ L
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR-----GGCKPNVVTYTTIIQGLSK 412
Query: 430 EGSVQD 435
G V +
Sbjct: 413 IGRVAN 418
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 157/392 (40%), Gaps = 51/392 (13%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+IR + +R A+ + M RK + DL H FL D
Sbjct: 160 LIRSFARTRRADDAVTCFEIMKRK----------RCKPDL----HTFLILVDCLCKAGMD 205
Query: 128 EKTYQTY----------------GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
EK ++ + A++ ++ ++ +A F +M++ G + YN
Sbjct: 206 EKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNT 265
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES-- 229
++ +K G ++ VL M AK P +Y I +NS LE E + R M +
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASG 325
Query: 230 -QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
+P+ V+ Y S H + K+ + +A + + E + D I + +I GN
Sbjct: 326 FRPNSVI----YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNF 381
Query: 289 SEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
+ + + ++ + CK + Y T+++ L K+G A +++K G D+
Sbjct: 382 EQAAKSFEEMMRGGCKPNVV-TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYIC 440
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG----FQCMKAA 403
++ G+C G + A +L++L + + ++ + G D G E+ F+ KAA
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAA 500
Query: 404 LSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
DP + SI+ L G + +
Sbjct: 501 AETL--------DPGLCCSIIVGLCKTGRLDE 524
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 154/376 (40%), Gaps = 27/376 (7%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNL- 124
++R L K KR +A EV M + C F P + +D + + A N+
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEK---CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287
Query: 125 -KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
K T TYG L+N + ++A FR M G +++ Y ++ ++K+G+ +
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK 347
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTY 240
+ + EM PD ++ + I+ + E EM +P++V TY
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVV----TY 403
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
+ K + A ++K D + Y L+ + LG E +L D E
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLD-ELD 462
Query: 301 ACKRYINRD-YITMLEALMKLGEHEEA-EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
C N Y +++ L G E+ + + ++ + + + D + ++I+G C G +
Sbjct: 463 KCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRL 522
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDA--GKTERGFQCMKAALSVYVEGKGWKPD 416
A I + +V +G ++ ++ G + + ER F AL +E G+ PD
Sbjct: 523 DEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAF-----ALLHDLEKVGYLPD 577
Query: 417 PKVITSI---LSKLGD 429
T + L K+G+
Sbjct: 578 AVTYTPLCIGLCKIGE 593
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 134/347 (38%), Gaps = 50/347 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +++ + ++A F +M G + +TY I+ SK G+ ++ M
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM 426
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHI---------------- 233
A FPD+ +Y ++ + L+ +L E++ S P++
Sbjct: 427 IAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSV 486
Query: 234 ----------------VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
LD S K +D+A + ++ + D YN
Sbjct: 487 EKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNI 546
Query: 278 LIS-LYASLGNKSE--VLRLWDLEKTACKRYINR--DYITMLEALMKLGEHEEAEKVLKE 332
LI+ L S N+ E L DLEK Y+ Y + L K+GE + A K+L+E
Sbjct: 547 LINGLCRSRENRVERAFALLHDLEKVG---YLPDAVTYTPLCIGLCKIGEVDRAVKMLEE 603
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
G + D A+ G C G V A ++ +++V +G A ++ + G K
Sbjct: 604 ASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKK 663
Query: 393 TERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
E + + GKG KP T+++ L G+V EAF
Sbjct: 664 LEDACKFFDEMI-----GKGQKPTVATYTALVQALCHAGNVD--EAF 703
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 169/451 (37%), Gaps = 57/451 (12%)
Query: 22 YYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQA 81
Y + I T + + GN + + ++ G K V II+ L K R + A
Sbjct: 361 YRPDVITHTVMIDGLCKSGN-FEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419
Query: 82 LEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK--DDEKTYQTYGALLN 139
+ M G C + LD ++ A L Q Y +L+N
Sbjct: 420 FRIMKGMIAHG-CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVN 478
Query: 140 CYVRQRQTDKALSH-FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
+K L F + K L I+ KTG+ ++ + M ++
Sbjct: 479 GLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCK 538
Query: 199 PDNFSYRICINSYGARSD--LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
PD +Y I IN + +E +L ++E ++ D TY K +D+A
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLP-DAVTYTPLCIGLCKIGEVDRA 597
Query: 257 SDVLKKAEERLEQKDGIGYNFL-------------ISLYASLGNK-------------SE 290
+L++A R D + Y L +SL+ + + +
Sbjct: 598 VKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIING 657
Query: 291 VLRLWDLEKTACKRY---INRD-------YITMLEALMKLGEHEEA----EKVLKEWELS 336
++++ LE ACK + I + Y +++AL G +EA E +L EL
Sbjct: 658 LIKVKKLED-ACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELV 716
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G+ I +A+I G+C V A + ED++ +G T + A + G +GKTE+
Sbjct: 717 GS---VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKA 773
Query: 397 FQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ ++ + G P T+IL L
Sbjct: 774 QELLQE-----MAAGGSPPHAATFTAILDGL 799
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 190/428 (44%), Gaps = 31/428 (7%)
Query: 68 IIRDLRKRKRFSQALEVSDWM-NRK-GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK 125
I++ L K+ AL V +W+ NRK + AV + ++G+ +A S NL
Sbjct: 133 IVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLC 192
Query: 126 DD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ-Y 182
D + Y +++ + + +A+ F+KM+E+G + +TYN I+ +Y K G +
Sbjct: 193 KDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPW 252
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
K+ ++ MK+ I PD+++Y I+ + E +L+EM+ D TY +
Sbjct: 253 NKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMK-LAGFSPDKVTYNA 311
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
Y K+ +A +VL++ E + YN LIS YA G + L +L+
Sbjct: 312 LLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDAL---ELKNQMV 368
Query: 303 KRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
++ I D Y T+L K G+ + A ++ +E G + NA+I + N G
Sbjct: 369 EKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFT 428
Query: 360 NAEAILEDLVEKGKATTPN--SWAVVAAGYFDAG---KTERGFQCMKAALSVYVEGKGWK 414
+ ED+ K +P+ +W + + + G + F+ MK A G+
Sbjct: 429 EMMKVFEDI--KTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRA--------GFV 478
Query: 415 PDPKVITSILSKLGDEGSV-QDVEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDEL 471
P+ +++S GS Q + + L + + Y+A + A R G K +++
Sbjct: 479 PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKV 538
Query: 472 LDSMKADG 479
L MK DG
Sbjct: 539 LAEMK-DG 545
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 148/352 (42%), Gaps = 25/352 (7%)
Query: 130 TYQTYGALLNCYVRQRQT-DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
T TY +LN Y + +K + +MK GIA + TYN ++ + YE+ V
Sbjct: 234 TLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGV 293
Query: 189 LTEMKAKNIFPDNFSYRICINSYG-ARSDLEGMEIILREMESQ---PHIVLDWSTYASAA 244
L EMK PD +Y ++ YG +R E ME +L+EME P IV TY S
Sbjct: 294 LKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAME-VLQEMEGNGCPPSIV----TYNSLI 348
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG-NKSEVLRLWDLEKTACK 303
Y + L++ A ++ + E+ + D Y L+S + G +K+ V ++ CK
Sbjct: 349 SAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCK 408
Query: 304 RYINRDYITMLEALMKL----GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
I AL+K+ G+ E KV ++ + S D N ++ + NG+
Sbjct: 409 -----PNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDS 463
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
+ +++ G +++ + + Y G ++ K L G PD
Sbjct: 464 EVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEA-----GVNPDLSS 518
Query: 420 ITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDEL 471
++L+ L G + E +A ++ ++ + + NGK ++ +
Sbjct: 519 YNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERM 570
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 134/328 (40%), Gaps = 30/328 (9%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ Y R D+A++ +++M E G+ +YN ++ ++ G +++ VL EM
Sbjct: 483 TFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEM 542
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
K P+ +Y +++Y ++E M + E+ S +P VL + K
Sbjct: 543 KDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVL----LKTLVLVNSK 598
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+L+ + + +R D N ++S+Y ++ + D K
Sbjct: 599 CDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTT 658
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ + E +E++L+E G D N VI YC NG +++A +L ++
Sbjct: 659 YNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMR 718
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG---------KGWKPDPKVI 420
E G A ++ A Y AA S++VE G KP+
Sbjct: 719 ESGPAPDIITYNTFIASY--------------AADSMFVEAIDVVCYMIKHGCKPNQSTY 764
Query: 421 TSILSKLGDEGSVQDVEAFVAALRTVIP 448
SI+ + FV LR + P
Sbjct: 765 NSIVDWYCKLNRRDEASMFVNNLRKLDP 792
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 139/306 (45%), Gaps = 11/306 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N V ++ + + +M + GIA +T ++N ++ +++T + + M
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180
Query: 193 KAKNIFPDNFSYRICINSYG-ARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K K PD ++ I ++ A D + E + EM + + D + + + +KA
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFE-VFHEMMAMGFVPPDRALHTAMVRTLLKAK 239
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRD 309
+ +A +V + E+ D I YN +I A G+ E L++ D L K +
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT-- 297
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ +L K G E AE++ + SG ++ I ++I G+ +G ++ A ++ +++V
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E G + V+ G +G E+ + + + G KP+ T+I+ L
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR-----GGCKPNVVTYTTIIQGLSK 412
Query: 430 EGSVQD 435
G V +
Sbjct: 413 IGRVAN 418
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 162/418 (38%), Gaps = 84/418 (20%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+IR + +R A+ + M RK + DL H FL D
Sbjct: 160 LIRSFARTRRADDAVTCFEIMKRK----------RCKPDL----HTFLILVDCLCKAGMD 205
Query: 128 EKTYQTY----------------GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
EK ++ + A++ ++ ++ +A F +M++ G + YN
Sbjct: 206 EKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNT 265
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES-- 229
++ +K G ++ VL M AK P +Y I +NS LE E + R M +
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASG 325
Query: 230 -QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
+P+ V+ Y S H + K+ + +A + + E + D I + +I GN
Sbjct: 326 FRPNSVI----YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNF 381
Query: 289 SEVLRLW-DLEKTACK-----------------RYINR-----------------DYITM 313
+ + + ++ + CK R N YI +
Sbjct: 382 EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICL 441
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
L+ KLG +EA ++L E + +S + ++ ++++ G C+ G V+N L+DL E+ K
Sbjct: 442 LDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENT---LDDLFEQSK 498
Query: 374 ATT----PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
A P + G G+ + + + +S +G KPD +++ L
Sbjct: 499 AAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVS-----EGCKPDATTYNILINGL 551
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 154/376 (40%), Gaps = 27/376 (7%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNL- 124
++R L K KR +A EV M + C F P + +D + + A N+
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEK---CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287
Query: 125 -KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
K T TYG L+N + ++A FR M G +++ Y ++ ++K+G+ +
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK 347
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTY 240
+ + EM PD ++ + I+ + E EM +P++V TY
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVV----TY 403
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
+ K + A ++K D + Y L+ + LG E +L D E
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLD-ELD 462
Query: 301 ACKRYINRD-YITMLEALMKLGEHEEA-EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
C N Y ++++ L G E + + ++ + + + D + ++I+G C G +
Sbjct: 463 KCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRL 522
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDA--GKTERGFQCMKAALSVYVEGKGWKPD 416
A I + +V +G ++ ++ G + + ER F AL +E G+ PD
Sbjct: 523 DEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAF-----ALLHDLEMVGYLPD 577
Query: 417 PKVITSI---LSKLGD 429
T + L K+G+
Sbjct: 578 AVTYTPLCIGLCKIGE 593
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 133/347 (38%), Gaps = 50/347 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +++ + ++A F +M G + +TY I+ SK G+ ++ M
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM 426
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVL-------------- 235
A FPD+ +Y ++ + L+ +L E++ S P++ L
Sbjct: 427 IAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSV 486
Query: 236 ------------------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
D S K +D+A + ++ + D YN
Sbjct: 487 ENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNI 546
Query: 278 LIS-LYASLGNKSE--VLRLWDLEKTACKRYINR--DYITMLEALMKLGEHEEAEKVLKE 332
LI+ L S N+ E L DLE Y+ Y + L K+GE + A K+L+E
Sbjct: 547 LINGLCRSRENRVERAFALLHDLEMVG---YLPDAVTYTPLCIGLCKIGEVDRAVKMLEE 603
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
G + D A+ G C G V A ++ +++V +G A ++ + G K
Sbjct: 604 ASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKK 663
Query: 393 TERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
E + + GKG KP T+++ L G+V EAF
Sbjct: 664 LEDACKFFDEMI-----GKGQKPTVATYTALVQALCHAGNVD--EAF 703
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 162/452 (35%), Gaps = 59/452 (13%)
Query: 22 YYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQA 81
Y + I T + + GN + + ++ G K V II+ L K R + A
Sbjct: 361 YRPDVITHTVMIDGLCKSGN-FEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419
Query: 82 LEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK--DDEKTYQTYGALLN 139
+ M G C + LD ++ A L Q Y +L+
Sbjct: 420 FRIMKGMIAHG-CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVK 478
Query: 140 CYVRQRQTDKALSH-FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
+ L F + K L I+ KTG+ ++ + M ++
Sbjct: 479 GLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCK 538
Query: 199 PDNFSYRICINSYGARSD---LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
PD +Y I IN RS +E +L ++E ++ D TY K +D+
Sbjct: 539 PDATTYNILINGL-CRSRENRVERAFALLHDLEMVGYLP-DAVTYTPLCIGLCKIGEVDR 596
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD------------------- 296
A +L++A R D + Y L + G + L+
Sbjct: 597 AVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIIN 656
Query: 297 -------LEKTACKRY---INRD-------YITMLEALMKLGEHEEA----EKVLKEWEL 335
LE ACK + I + Y +++AL G +EA E +L EL
Sbjct: 657 GLIKGKKLED-ACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGEL 715
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G+ I +A+I G+C V A + ED++ +G T + A + G +GKTE+
Sbjct: 716 VGS---VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEK 772
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ ++ + G P T+IL L
Sbjct: 773 AQELLQE-----MAAGGSPPHAATFTAILDGL 799
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 186/455 (40%), Gaps = 28/455 (6%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM--NRKGICVFAPCDHAVQLDL 107
D V G K +IR L + K F +A E WM NR + + + V +
Sbjct: 206 FDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVT---YNVLIHG 262
Query: 108 IGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
+ + G L A +L++ ++ TY L+ + R +Q D + +M E+G +
Sbjct: 263 LCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPT 322
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
+ ++ K G + D++ ++ P+ F Y IN+ DL+ E++ +
Sbjct: 323 EAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYK 382
Query: 226 EMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
M S ++ L+ TY+ + K ++D A + E ++ YN LI+ +
Sbjct: 383 NMHSM-NLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKF 441
Query: 286 GNKSEVLRLWD------LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
G+ S L+ LE TA + T++ K + E+A K+ +E +
Sbjct: 442 GDLSAAEFLYTKMINEGLEPTA------TTFTTLISGYCKDLQVEKAFKLYREMNEKEIA 495
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC 399
A+I G C+ + A + +++VE+ T ++ V+ GY A ++ F+
Sbjct: 496 PSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFEL 555
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFI 458
++ L G PD ++S L G V + F+ L + + +N Y A +
Sbjct: 556 LEDMLH-----NGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALL 610
Query: 459 KANIRNGKGVDELLDS--MKADGIDEDEETKEILV 491
G+ + L S M GI+ D +L+
Sbjct: 611 HGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLI 645
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 126/310 (40%), Gaps = 12/310 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y AL+N + DKA ++ M M + L+ +TY+ ++ + K G + M
Sbjct: 360 VYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRM 419
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
I + Y IN + DL E + +M ++ + +T+ + Y K
Sbjct: 420 IEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEG-LEPTATTFTTLISGYCKDLQ 478
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
++KA + ++ E+ + LI S +E +L+D + Y
Sbjct: 479 VEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNV 538
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
M+E K ++A ++L++ +G DT +I G C+ G V A+ ++DL +K
Sbjct: 539 MIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKN 598
Query: 373 KATTPNSWAVVAAGYFDAGK-----------TERGFQCMKAALSVYVEGKGWKPDPKVIT 421
++ + GY G+ +RG +V ++G + D K +
Sbjct: 599 LKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLF 658
Query: 422 SILSKLGDEG 431
+L K+ D+G
Sbjct: 659 GLLKKMYDQG 668
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 153/378 (40%), Gaps = 22/378 (5%)
Query: 116 SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
+AE ++ + ++ E T T+ L++ Y + Q +KA +R+M E IA S T+ ++
Sbjct: 446 AAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALI 505
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
T + + + EM + I P +Y + I Y +++ +L +M +
Sbjct: 506 YGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNG-L 564
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
V D TY + A D + ++ + + + Y+ L+ Y G +E L
Sbjct: 565 VPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEAL- 623
Query: 294 LWDLEKTAC---KRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
+C +R IN D + +++ MK + + +LK+ G D+ I +
Sbjct: 624 -----SASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTS 678
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
+I Y G + + L+ +V + ++ G G+ +R + L+
Sbjct: 679 MIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTAN 738
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKG 467
+ P+ L L EG++++ + + N Y+ I+ + G+
Sbjct: 739 IS-----PNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILIRGFCKLGRL 793
Query: 468 VD--ELLDSMKADGIDED 483
++ ++L M +GI D
Sbjct: 794 IEATKVLSEMTENGIFPD 811
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 126/299 (42%), Gaps = 22/299 (7%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
NLK +E Y ALL+ Y Q + +ALS +M + GI + + + ++ K
Sbjct: 598 NLKLNE---MCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDM 654
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL----EGMEIILREMESQPHIVLDWS 238
+++ +L +M + + PD+ Y I++Y E +++++ E + P++V
Sbjct: 655 KRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTE-KCFPNVV---- 709
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
TY + + K ID+A + +K + + Y + GN E DL
Sbjct: 710 TYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEA---TDLH 766
Query: 299 KTACKRYI--NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
K + Y ++ KLG EA KVL E +G D + +I +C +G
Sbjct: 767 HEMLKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSG 826
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
V A + + ++ KG ++ ++ G G ++ F+ LS +G KP
Sbjct: 827 DVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLS-----RGLKP 880
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 106/259 (40%), Gaps = 37/259 (14%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+D + K G+ + GE + + K F + + +MN G+C D A
Sbjct: 680 IDAYSKEGSFKKSGECLDL---MVTEKCFPNVVTYTAFMN--GLCKVGEIDRA------- 727
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
G L + +N+ + TYG L+ ++ +A +M + G+ +T TY
Sbjct: 728 ---GHLFEKMLTANISPNS---VTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATY 780
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD----LEGMEIILR 225
N ++ + K G+ + VL+EM IFPD +Y I + D +E + +LR
Sbjct: 781 NILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLR 840
Query: 226 EMESQPHIVLDWSTYASAAHFYIKANLIDKA----SDVLKKAEE-----RLEQKDGIGYN 276
+ + + Y + +DKA +D+L + + +L+++D N
Sbjct: 841 KGVEPDSVAFNLLIYGCCVN-----GALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCN 895
Query: 277 FLISLYASLGNKSEVLRLW 295
FL+ G LRL+
Sbjct: 896 FLMHGGCVTGEVDTALRLY 914
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 161/397 (40%), Gaps = 24/397 (6%)
Query: 105 LDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIAL 164
+ LIG++ F S F D +Y T +L R +TD+++ ++ E G+
Sbjct: 212 IGLIGKMKDF----SCFP----DNASYNTILDVL-WLCRSGKTDQSIDKLNELLESGLVP 262
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIIL 224
+TYN I+ Y + GQ EK +M K+ PD F+ I + L+ +
Sbjct: 263 HQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLF 322
Query: 225 REMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
S+ + D TY + K ++A D+L + EE+ D YN ++ A
Sbjct: 323 NTWISKGKAI-DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALAD 381
Query: 285 LGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+ +V + + ++ D T +L L G + A K+ W G + D
Sbjct: 382 --AEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 439
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEK-GKATTPNSWAVVAAGYFDAGKTERGFQCM 400
N +I G C G + A +L ++ EK G ++ + GY G+ E+ FQ
Sbjct: 440 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFR 499
Query: 401 KAALSVYVEGKGWKPDPKVITSILSKLGDEGS-VQDVEAFVAALRTVIPMNRQMYHAFIK 459
+ K +KPD +L L EG V+ ++ F + ++ Y+ I
Sbjct: 500 NKMVE-----KSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIIS 554
Query: 460 ANIRNGKGVD--ELLDSMKADGIDEDEETKEILVCTM 494
+ G+ + +LL MK + D T ++C +
Sbjct: 555 GLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCAL 591
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 8/179 (4%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+ W+ G + II L K RF +A ++ M K V P ++G
Sbjct: 428 FNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLV--PDQTTYNTIILG 485
Query: 110 RVH-GFLSAESYFSNLKDDEKTYQ----TYGALLNCYVRQRQTDKALSHFRKMKEMGIAL 164
G + F N K EK+++ T LL R+ KAL F G A+
Sbjct: 486 YCREGQVEKAFQFRN-KMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAI 544
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII 223
+TYN I+ K G++E+ D+L EMK K + PD ++Y + + +E E +
Sbjct: 545 DAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRMEAEEFM 603
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 118/317 (37%), Gaps = 41/317 (12%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+ W+ G + II L K RF +A ++ M K + +A+ L +
Sbjct: 322 FNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAI-LCALA 380
Query: 110 RVHGFLSAESYFSNLKDDEKTYQ----TYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
G + F N K EK+++ T LL + D AL F G A+
Sbjct: 381 DAEGQVEKAFQFRN-KMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 439
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
+TYN I+ K G++E+ D+L EM+ KN
Sbjct: 440 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKN----------------------------- 470
Query: 226 EMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
+V D +TY + Y + ++KA K E+ + D N L+
Sbjct: 471 ------GLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCRE 524
Query: 286 GNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
G + L+L++ + K Y T++ L K G EEA +L E + D
Sbjct: 525 GMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTY 584
Query: 346 NAVIIGYCNNGLVQNAE 362
NA++ + G ++ E
Sbjct: 585 NAILCALADAGRMEAEE 601
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 137/338 (40%), Gaps = 25/338 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y AL+ Y +A S F ++K+ G ++Y ++ Y K+G+ EK V M
Sbjct: 376 SYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELM 435
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ + P+ SY I++YG++ L IL EME QP+IV + A+ K
Sbjct: 436 RRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQK 495
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
K VL AE R + + YN I Y S+G + L L+ +T +
Sbjct: 496 V----KIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVT 551
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP------NAVIIGYCNNGLVQNAEA 363
Y ++ K+ ++ EA L E D +IP ++VI Y G V AE+
Sbjct: 552 YNVLISGCCKMSKYGEALGFLDEM------MDLKIPLSKEVYSSVICAYSKQGQVTEAES 605
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
+ + G ++ + Y A E+ +AL + +E +PD +S+
Sbjct: 606 MFTKMKMVGCRPDVITYTAMIHAYDVAENWEKA-----SALFLEMETDDVQPDSIACSSL 660
Query: 424 LSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKA 460
+ G V +R IP N + + A
Sbjct: 661 MRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSA 698
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 154/414 (37%), Gaps = 44/414 (10%)
Query: 112 HGFLSAESYFSNLKDD------EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
HG + N+ DD + TY L+N +AL+ +KM E G+
Sbjct: 207 HGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPD 266
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI---CINSYGARSDLEGMEI 222
+T+N ++ Y + QY KV MK NI PD + I C+ G + ++I
Sbjct: 267 LVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNG--KAIDI 324
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
E + D T+ + H Y I+ + + + YN LI Y
Sbjct: 325 FNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAY 384
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
AS G E +++ K Y ++L A K G+ E+A KV + + +
Sbjct: 385 ASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNL 444
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA 402
NA+I Y + GL+ A IL ++ G S + A G+ + + A
Sbjct: 445 VSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSA 504
Query: 403 ----------------------------ALSVY--VEGKGWKPDPKVITSILSKLGDEGS 432
ALS+Y + K KPDP ++S
Sbjct: 505 AELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSK 564
Query: 433 VQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
+ F+ + + IP+++++Y + I A + G+ + + MK G D
Sbjct: 565 YGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPD 618
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 146/359 (40%), Gaps = 27/359 (7%)
Query: 78 FSQALEVSDWMNRKG-------IC-VFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEK 129
++A+E+ M R G IC + A C Q I V LSA + L+ +
Sbjct: 460 LTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSV---LSA----AELRGIKL 512
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
Y + + Y+ + DKALS +R M+ + +TYN ++ K +Y + L
Sbjct: 513 NTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFL 572
Query: 190 TEMKAKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
EM I Y I +Y G ++ E M ++ + +P ++ TY + H
Sbjct: 573 DEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVI----TYTAMIHA 628
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y A +KAS + + E Q D I + L+ + G ++VL L + + +
Sbjct: 629 YDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFN 688
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
N + M+ A L E E ++K E S + + N ++ +G ++ +
Sbjct: 689 NSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFY 748
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+V G +++++ AG + + ++ ++E G +P + SI S
Sbjct: 749 KIVASGAEINFYTYSILLKNLLAAGNWRKYIEVLQ-----WMEEAGLQPSVGMYRSISS 802
>gi|242065966|ref|XP_002454272.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
gi|241934103|gb|EES07248.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
Length = 519
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 176/435 (40%), Gaps = 78/435 (17%)
Query: 45 RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQ 104
R+ P LD V+ VR + +L +R + Q LEV WM ++ V ++
Sbjct: 73 RLVPVLDRHVRG---VRTEHCFLLFEELGRRDAWLQCLEVFRWMQKQRWYVADNGIYSKL 129
Query: 105 LDLIGRVHGFLSAESYFSNL-----KDDEKTYQTY-GALLNCYVRQRQTDKALSHFRKMK 158
+ ++GR A FS + K D Y + GA L+ + + KAL +F KMK
Sbjct: 130 ISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKSKALAKALGYFEKMK 189
Query: 159 EMGIALSTL------------------------------------TYNDIMCLYSKTGQY 182
+ T+ TYN ++ Y K G
Sbjct: 190 CIARCQPTIVTYNILLRAFAQAGDTKQVDILFKDLDESVVSPDIYTYNGVLDAYGKNGMI 249
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII----LREMESQPHIVLDWS 238
+++ VL MK+K PD ++ I I+SYG + + ME + LR E H
Sbjct: 250 KEMESVLLRMKSKQCRPDVITFNILIDSYGRKQIFDKMEQVFKSLLRSKERPTH-----P 304
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
T+ S Y KA L +KA V+KK EE + + + LI +YA S+ +++D
Sbjct: 305 TFNSMITNYGKARLREKAEYVVKKMEELGYKPNYVTQECLIMMYAHCDCVSKARQVFDEL 364
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKVL-----KEWELSGNSYD------TRIPNA 347
++ + +ML+A G H EA+++L K +G++Y TR +
Sbjct: 365 VSSQNKVQLSSLNSMLDAYCMNGLHTEADQLLDTALQKCVVPNGSTYKLLYKAYTRANDK 424
Query: 348 VIIGYC-----NNGLVQNAEAILEDL-----VEKGKATTPNSWAVVAAGYFDAGKTERG- 396
V++ G+V N + L+ L E+ T+P + G AG +E G
Sbjct: 425 VLVQKLLKRMNKQGIVPNKKFFLDALEAFGTSERKPRTSPAINSASKLGADSAGDSESGR 484
Query: 397 --FQCMKAALSVYVE 409
C + VY+E
Sbjct: 485 IHLICTRTVNIVYLE 499
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 164/406 (40%), Gaps = 55/406 (13%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY L+NCY R R+ D L F ++ G+ +YN ++ +SK G+ +K D+
Sbjct: 117 TIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLF 176
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---------------------- 227
+M+ + I P+ +Y IN +++ E +LR+M
Sbjct: 177 YKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTS 236
Query: 228 ------------ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
S +V D S K I +A D+ + + D I Y
Sbjct: 237 GMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISY 296
Query: 276 NFLISLYASLGNKSEVLRLWDL---EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
L+ YA+ G + + L+++ E R++ + T++ A +LG +++ + ++
Sbjct: 297 GALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHV---FNTLINAYARLGMMDKSLLMFED 353
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
G + D + VI +C G + +A +++ G ++ + G +
Sbjct: 354 MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRD 413
Query: 393 TERGFQCMKAALSVYVEGKGWKPDP-KVITSILSKLGDEGSVQDVEAFVAAL------RT 445
+ + + LS KG P K TSI++ L EG V + + V +
Sbjct: 414 LVKAKELISDMLS-----KGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPN 468
Query: 446 VIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
+I N + + N++ G LLDSM++ G++ D T LV
Sbjct: 469 LITFNSLVDGYCLVGNMKEAVG---LLDSMESVGVEPDIYTYNTLV 511
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 6/248 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +L++ Y +A+ M+ +G+ TYN ++ Y K G+ + + +M
Sbjct: 471 TFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 530
Query: 193 KAKNIFPDNFSYRICINS-YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K + + SY I ++ + AR + E+ +ES + + TYA+ + N
Sbjct: 531 LHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG--MAVSIHTYATVLGGLCRNN 588
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
D+A+ +L+K + D + +N +I +G + E L+ T Y
Sbjct: 589 CTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYR 648
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
M+ L+K E+A+ + E S + D+RI N +I N G V A L + +K
Sbjct: 649 VMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKK 708
Query: 372 G---KATT 376
G +ATT
Sbjct: 709 GILPEATT 716
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 159/430 (36%), Gaps = 65/430 (15%)
Query: 62 VGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSA---- 117
VG + L K R +A ++ D M KG P + + +HG+ +A
Sbjct: 258 VGNCNSFMTALCKHGRIKEARDIFDSMVLKG-----PKPDVISYGAL--LHGYATAGCIA 310
Query: 118 --ESYFS-----NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYN 170
++ F+ + D + T L+N Y R DK+L F M + G+ +T++
Sbjct: 311 GMDNLFNVMVCEGVVPDRHVFNT---LINAYARLGMMDKSLLMFEDMTKQGVNPDIITFS 367
Query: 171 DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
++ + + G+ + + M + PD Y I R DL + ++ +M S+
Sbjct: 368 TVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSK 427
Query: 231 --PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
P + + + S + K + + DV+ ++ + I +N L+ Y +GN
Sbjct: 428 GIPPPCIKF--FTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNM 485
Query: 289 SEVLRLWD----------------LEKTACKR-------YINRD------------YITM 313
E + L D L CK + RD Y +
Sbjct: 486 KEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNII 545
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
L L + A+++ E SG + V+ G C N A +LE L
Sbjct: 546 LHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNV 605
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
++ +V F G+ + + + AA+S Y G P +++ L E S
Sbjct: 606 KFDILTFNIVIRAMFKVGRRQEAKE-LFAAISTY----GLVPTILTYRVMITNLIKEESF 660
Query: 434 QDVEAFVAAL 443
+D + +++
Sbjct: 661 EDADNLFSSM 670
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/166 (19%), Positives = 65/166 (39%), Gaps = 1/166 (0%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ TY +L R TD+A K+ M + LT+N ++ K G+ ++ ++
Sbjct: 573 SIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELF 632
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ + P +YR+ I + E + + ME + D +
Sbjct: 633 AAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME-KSSCTPDSRILNEIIRMLLN 691
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
+ KA + L K +++ + + LI L++ G E ++L
Sbjct: 692 KGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLL 737
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 148/325 (45%), Gaps = 12/325 (3%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
T+ L+N + + KA +KM+E G S +TYN ++ Y K G+Y+ +++ +
Sbjct: 169 STFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQ 228
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M +K I D +Y + ++ + ++L++M + I + TY S + ++K
Sbjct: 229 MGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKR-MISPNEITYNSIINGFVKEG 287
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
I A+ + ++ + + YN LI + GN + L + ++ + + Y
Sbjct: 288 KIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYS 347
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+L L + + E ++ +L+ ++G A+I G C NGL+ + +L+ +++
Sbjct: 348 ALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKD 407
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G +++V+ G+ GK + +K + + G P+ + T+++ G
Sbjct: 408 GVVPDVVTFSVLINGFCRVGKIKN----VKEIICKMYKA-GLAPNSIIYTTLIYNYCKTG 462
Query: 432 SVQDVEAFVAALRTVIPMNRQMYHA 456
V VEAF + + M+R Y A
Sbjct: 463 DV--VEAF----KVYVAMSRIGYDA 481
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 177/431 (41%), Gaps = 30/431 (6%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQ- 132
K+ R+ ALE+ D M KGI A C + + +D + + + SA+ Y K ++
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADA-CTYNMLVDDLCKNNR--SAKGYLLLKKMRKRMISP 271
Query: 133 ---TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
TY +++N +V++ + A F++M + + + +TYN ++ + G +E+ +L
Sbjct: 272 NEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTIL 331
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
M+A P+ SY +N + E + IL M IV Y + +
Sbjct: 332 EMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIV-GCIAYTAMIDGLCR 390
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI--- 306
L++++ +L K + D + ++ LI+ + +G ++ ++++ CK Y
Sbjct: 391 NGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVG------KIKNVKEIICKMYKAGL 444
Query: 307 ---NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ Y T++ K G+ EA KV G + I N ++ C +G V AE
Sbjct: 445 APNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEY 504
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
+ + G ++ + GY ++G + F + G P +
Sbjct: 505 FFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKA-----GHHPSHFTYGGL 559
Query: 424 LSKLGDEGSVQDVEAFVAALRTVIP--MNRQMYHAFIKANIRNGKGVD--ELLDSMKADG 479
L L G ++ + + L IP ++ Y+ + ++G D L D M
Sbjct: 560 LKALCRAGKFKEAKRLLDKLH-YIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRN 618
Query: 480 IDEDEETKEIL 490
+ D T I+
Sbjct: 619 VLPDSYTYAII 629
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 141/365 (38%), Gaps = 48/365 (13%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ L+ Y+R+ AL FR M G S T N ++ K + V E
Sbjct: 99 SVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKE 158
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M A+ + PD ++ I IN L+ +L++ME + V TY + ++Y K
Sbjct: 159 MLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGY-VPSVVTYNTVLNWYCKKG 217
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
A +++ + + + D YN L+ L + + + L K KR I+ + I
Sbjct: 218 RYKAALELIDQMGSKGIEADACTYNMLVD---DLCKNNRSAKGYLLLKKMRKRMISPNEI 274
Query: 312 T---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
T ++ +K G+ A ++ +E + + NA+I G+C++G + A ILE +
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
G S++ + G K E + SIL ++
Sbjct: 335 EATGPKPNEVSYSALLNGLCRHAKFE------------------------LSKSILERMR 370
Query: 429 DEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEET 486
G + A Y A I RNG + +LLD M DG+ D T
Sbjct: 371 MNGMIVGCIA---------------YTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVT 415
Query: 487 KEILV 491
+L+
Sbjct: 416 FSVLI 420
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 4/250 (1%)
Query: 136 ALLNCYVRQRQTDKALSHFRKM-KEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
+LN Y R + KA F M + I+ S TYN ++ Y+K K ++ M
Sbjct: 699 VILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMR 758
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
IFPD + I + +S + + + L + + +D T+ Y + + +
Sbjct: 759 TGIFPDKLTCHSLILGF-CKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVG 817
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV-LRLWDLEKTACKRYINRDYITM 313
KA D++ D ++ +IS+ + + E L L ++ + C R YI +
Sbjct: 818 KAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPD-RRQYIAL 876
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
+ + ++G A K+ E E G S +A++ G G V+ A+ +L+ ++ K
Sbjct: 877 VNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSL 936
Query: 374 ATTPNSWAVV 383
T ++ +
Sbjct: 937 IPTIATFTTL 946
>gi|422294672|gb|EKU21972.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 535
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 12/270 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKE-----------MGIALSTLTYNDIMCLYSKTGQ 181
TY L++ Y + T+ A + R+M E + + + +TY +M Y+ G
Sbjct: 244 TYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGD 303
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
E VL M+ I P+ +Y + + +Y R D++G E +LR M S ++ + +TY
Sbjct: 304 VEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISA-YVAPNANTYT 362
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
+ H Y A +VL + E + + L+++YA+ G + + A
Sbjct: 363 TLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAA 422
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
+ T+L A + G+ AE+VL+ E N ++ GY + G V A
Sbjct: 423 GVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLTYNTLMNGYADKGDVAGA 482
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
E +L + KG + + + Y +AG
Sbjct: 483 EGVLARMRAKGVGPDETTLSTLLHAYAEAG 512
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 120/298 (40%), Gaps = 37/298 (12%)
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
T++ +M +Y+ E VL + A+ + PD +Y +++Y R D EG E +LR M
Sbjct: 209 TFHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRM 268
Query: 228 ----------ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
E ++ + TY + Y ++ + VL++ EE + + Y
Sbjct: 269 LEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTV 328
Query: 278 LISLYASLGN---KSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLK 331
L++ Y G+ VLR Y+ + Y T+L A G AE+VL
Sbjct: 329 LMTAYTLRGDVKGAEGVLRRM------ISAYVAPNANTYTTLLHAYTVNGNAAGAEEVLA 382
Query: 332 EWELSGNSYDTRIPNAVIIG-----YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
E +G +P A+ Y G V++A+ +L + G T ++ +
Sbjct: 383 RMEAAGV-----LPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNA 437
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
Y AG Q ++ E + + P ++++ D+G V E +A +R
Sbjct: 438 YVVAGDVGGAEQVLR-----RREAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMR 490
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 96/236 (40%), Gaps = 7/236 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ Y + + + +M+E IA + +TY +M Y+ G + VL M
Sbjct: 290 TYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRM 349
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + P+ +Y +++Y + G E +L ME+ ++ T+A+ Y
Sbjct: 350 ISAYVAPNANTYTTLLHAYTVNGNAAGAEEVLARMEAA-GVLPTALTFATLMTVYAARGE 408
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLY---ASLGNKSEVLRLWDLEKTACKRYINRD 309
++ A VL + E + ++ L++ Y +G +VLR + E
Sbjct: 409 VESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAE---AYPDFPLT 465
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y T++ G+ AE VL G D + ++ Y G AEA+L
Sbjct: 466 YNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGDPLGAEAVL 521
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 133/304 (43%), Gaps = 12/304 (3%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
AL ++++ G+ +TYN ++ S+ + V EM A PD ++Y ++
Sbjct: 50 ALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVS 109
Query: 210 SYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
+G + E++ +E+ QP D TY S + + K +++ V ++ +
Sbjct: 110 VHGRCGKAQEAELMFKELVEKGFQP----DAVTYNSLLYAFAKEGDVERVERVCEELVKA 165
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+KDGI YN +I +Y +G L L+D + Y ++++L K+ EA
Sbjct: 166 GFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEA 225
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
KVL+E +G +A+I Y +G +AE + +VE G ++ V+
Sbjct: 226 GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDV 285
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV 446
+ + +T + +A + G+KPD + +L+ L ++E + + V
Sbjct: 286 FARSDETRKLMVLYRAMIK-----DGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAV 340
Query: 447 IPMN 450
MN
Sbjct: 341 FEMN 344
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 112/275 (40%), Gaps = 26/275 (9%)
Query: 114 FLSAESYFSNLKDDEKTYQ------------TYGALLNCYVRQRQTDKALSHFRKMKEMG 161
+SA S SNL D ++ TY A+++ + R + +A F+++ E G
Sbjct: 72 LISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKG 131
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG--ARSDLE- 218
+TYN ++ ++K G E+V V E+ D +Y I+ YG R DL
Sbjct: 132 FQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLAL 191
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
G+ +R + P D TY K + I +A VL++ + + + ++ L
Sbjct: 192 GLYDEMRAIGCTP----DAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSAL 247
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
I YA G + + R +D + + Y+ ML+ + E + + + G
Sbjct: 248 ICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGY 307
Query: 339 SYDTRIPNAVIIGYCNN-------GLVQNAEAILE 366
D + ++ G++Q+ EA+ E
Sbjct: 308 KPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFE 342
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 166/411 (40%), Gaps = 12/411 (2%)
Query: 81 ALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD--DEKTYQTYGALL 138
AL + M +GI + +++ + G+ + SA++ F K D Y ++
Sbjct: 305 ALSCVEEMKSEGIEMTV-VTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNII 363
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
+ + + D+A R+M+E GI Y+ +M Y+ +K V +K
Sbjct: 364 HAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFK 423
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
P SY IN Y + I +EMES I + TY+ + +I + A
Sbjct: 424 PTIISYGCLINLYVKVGKVPKAIAISKEMESH-GIKHNNKTYSMLINGFIHLHDFANAFS 482
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALM 318
+ + + Q D YN L+ + +GN +R+++ + + NR + ++E
Sbjct: 483 IFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFA 542
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
G+ + A L SG + NA+I G V+ A ++L+ + G A +
Sbjct: 543 VAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEH 602
Query: 379 SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA 438
++ ++ GY +G + F+ ++ G K D + ++L G +Q A
Sbjct: 603 TYTIIMRGYAASGDIGKAFEYF-----TKIKESGLKLDVYIYETLLRACCKSGRMQSALA 657
Query: 439 FVAALR-TVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEET 486
+ IP N +Y+ I R G +LL MK DGI + T
Sbjct: 658 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHT 708
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 124/286 (43%), Gaps = 3/286 (1%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A + F N++ E + +L++ Y ALS +MK GI ++ +TY+ ++
Sbjct: 270 ARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILIS 329
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
Y KT + ++ E K K + Y I+++ +++ E ++REME + I
Sbjct: 330 GYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREME-EDGID 388
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
Y S H Y K V ++ +E + I Y LI+LY +G + + +
Sbjct: 389 APIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAI 448
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
++ ++ N+ Y ++ + L + A + ++ SG D I N ++ +C
Sbjct: 449 SKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCK 508
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCM 400
G + A I E + ++ + ++ + G+ AG +R F +
Sbjct: 509 MGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTL 554
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/367 (19%), Positives = 160/367 (43%), Gaps = 21/367 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+G ++ Y ++ A + F M+ GI + + ++ Y+ G + EMK
Sbjct: 254 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMK 313
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
++ I +Y I I+ YG +D + + + +E +++ L+ Y++ H + ++ +
Sbjct: 314 SEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLD-NLNGIIYSNIIHAHCQSGNM 372
Query: 254 DKASDVLKKAEERLEQKDGIG-----YNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
D+A +++++ EE DGI Y+ ++ Y + ++ + L +++ K +
Sbjct: 373 DRAEELVREMEE-----DGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTII 427
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ +K+G+ +A + KE E G ++ + + +I G+ + NA +I ED+
Sbjct: 428 SYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDM 487
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
++ G + ++ + G +R + + ++ + +P + I+
Sbjct: 488 IKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFE-----RMQKERMQPSNRTFRPIIEGFA 542
Query: 429 DEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNG---KGVDELLDSMKADGIDEDE 484
G ++ + R+ Y+A I +R K V +LD M GI +E
Sbjct: 543 VAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVS-VLDKMSIAGIAPNE 601
Query: 485 ETKEILV 491
T I++
Sbjct: 602 HTYTIIM 608
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 36/243 (14%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY AL++ VR+ Q +KA+S KM GIA + TY IM Y+ +G K +
Sbjct: 565 TVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYF 624
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
T++K + D + Y + + ++ + REM Q I + Y + +
Sbjct: 625 TKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQ-KIPRNTFIYNILIDGWAR 683
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ +A+D+LK+ +E DGI N I + S YIN
Sbjct: 684 RGDVWEAADLLKQMKE-----DGIPPN--IHTFTS--------------------YIN-- 714
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
A K G+ + AE V++E G + + +I G+ L A E++
Sbjct: 715 ------ACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMK 768
Query: 370 EKG 372
G
Sbjct: 769 SAG 771
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 159/395 (40%), Gaps = 53/395 (13%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM-CLYSKTGQYEKVPDV 188
+ TYG L++C R R+ D + F ++ G+ T+ N + CL E V +
Sbjct: 155 SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVL 214
Query: 189 LTEMKAKNIFPDNFSYRICINSY-GARSDLEGMEIILREME----SQPHIV--------- 234
L M P+ SY I S G E ++++ R + P +V
Sbjct: 215 LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 274
Query: 235 ----------------------LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG 272
D TY S KA +DKA VL++ ++ + DG
Sbjct: 275 FKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDG 334
Query: 273 IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR--DYITMLEALMKLGEHEEAEKVL 330
+ Y +I Y+ G+ E +++ K K I + + + +L K G ++AE++
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMF--RKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIF 392
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+ G+ D + ++ GY G + + + +KG + + ++ + +
Sbjct: 393 QYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAH--- 449
Query: 391 GKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVI 447
+RG M A+ V+ E G+G +PD ++++S G + D +E F + +
Sbjct: 450 --AKRGM--MDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGL 505
Query: 448 PMNRQMYHAFIKANIRNGKGV--DELLDSMKADGI 480
N +YH+ I +G V EL+ M + GI
Sbjct: 506 EPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGI 540
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 162/412 (39%), Gaps = 55/412 (13%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAE--SYFSNL- 124
+I+ L R +AL++ M ++G C V + +HGF S NL
Sbjct: 233 VIKSLCGDSRSQEALDMVQRMAKEG----GRCSPDV-VSFNTVIHGFFKQGEVSKACNLI 287
Query: 125 -----KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
K E TY ++++ + R DKA R+M + G+ LTY I+ YS +
Sbjct: 288 NEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCS 347
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
G +++ + +M +K + P ++ ++S + E I + M ++ H+ D +
Sbjct: 348 GHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMP-DLVS 406
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
Y+ H Y +++ ++ + +N LIS +A G E + ++ +
Sbjct: 407 YSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQ 466
Query: 300 TACKRYINRDYITMLEALMKLGEHEEA-EK----------------------------VL 330
R Y T++ A ++G +A EK ++
Sbjct: 467 GQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLV 526
Query: 331 KEWELSGNSYDTRIP-------NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
K EL IP +++I CN G V +A + ++ G T ++ +
Sbjct: 527 KAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSL 586
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
GY GK E+ F + A +SV G +PD +++S G + D
Sbjct: 587 IDGYCLVGKMEKAFGVLDAMVSV-----GIEPDVVTYNTLVSGYCKSGKIDD 633
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 30/310 (9%)
Query: 109 GRVHGFLSAESYFSNL------KDDEKTYQ------------TYGALLNCYVRQRQTDKA 150
G + G ++ S+ S+L KD E+ +Q +Y LL+ Y + +
Sbjct: 364 GLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADM 423
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+ F M + GI + +N ++ ++K G ++ V TEM+ + + PD +Y I++
Sbjct: 424 NNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISA 483
Query: 211 YGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
+ L +M S +P+ V+ Y S H + + KA +++ + +
Sbjct: 484 FCRMGRLADAMEKFSQMISIGLEPNTVV----YHSLIHGFCMHGDLVKAKELVSEMMSKG 539
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK---RYINRDYITMLEALMKLGEHE 324
+ I F S+ SL N+ V+ D+ R + ++++ +G+ E
Sbjct: 540 IPRPNI--VFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKME 597
Query: 325 EAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
+A VL G D N ++ GYC +G + + + +++ K T ++++V
Sbjct: 598 KAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVL 657
Query: 385 AGYFDAGKTE 394
G F AG+T
Sbjct: 658 DGLFHAGRTS 667
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 150/372 (40%), Gaps = 28/372 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
++ +++ + +Q + KA + +M + G+ +TYN I+ K +K VL +M
Sbjct: 266 SFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQM 325
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
K + PD +Y I+ Y + + R+M S+ P IV T+ S K
Sbjct: 326 VDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIV----TFNSFMSSLCK 381
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A ++ + + D + Y+ L+ YA+ G +++ L+ A K +
Sbjct: 382 HGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLF--HSMADKGIVANC 439
Query: 310 YI--TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
+ ++ A K G +EA V E + G D + +I +C G + +A
Sbjct: 440 HCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQ 499
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI--TSILS 425
++ G + + G+ G + + + +S KG P P ++ +SI+
Sbjct: 500 MISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMS-----KGI-PRPNIVFFSSIIH 553
Query: 426 KLGDEGSVQDVE------AFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADG 479
L +EG V D + T++ N + + + GV LD+M + G
Sbjct: 554 SLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGV---LDAMVSVG 610
Query: 480 IDEDEETKEILV 491
I+ D T LV
Sbjct: 611 IEPDVVTYNTLV 622
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/359 (19%), Positives = 135/359 (37%), Gaps = 48/359 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY A+++ Y ++ FRKM G+ +T+N M K G+ + ++ M
Sbjct: 336 TYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYM 395
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD SY I ++ Y M + M + IV + + + K +
Sbjct: 396 TTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKG-IVANCHCFNILISAHAKRGM 454
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW----------------- 295
+D+A V + + + + D + Y+ LIS + +G ++ + +
Sbjct: 455 MDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHS 514
Query: 296 ---------DLEKT------ACKRYINRDYI----TMLEALMKLGEHEEAEKVLKEWELS 336
DL K + I R I +++ +L G +A V
Sbjct: 515 LIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHI 574
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G+ N++I GYC G ++ A +L+ +V G ++ + +GY +GK + G
Sbjct: 575 GDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDG 634
Query: 397 FQCMKAAL-----------SVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
+ L S+ ++G + ++ D G+ D++ + L+
Sbjct: 635 LILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLK 693
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 115/281 (40%), Gaps = 9/281 (3%)
Query: 71 DLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD--DE 128
DL K K + +S + R I F+ H++ + GRV + A F+ + D
Sbjct: 524 DLVKAKELVSEM-MSKGIPRPNIVFFSSIIHSLCNE--GRV---MDAHDVFNLVIHIGDR 577
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
T T+ +L++ Y + +KA M +GI +TYN ++ Y K+G+ + +
Sbjct: 578 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLIL 637
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
EM K + P +Y I ++ + + EM V D TY
Sbjct: 638 FREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAV-DIDTYKILLKGLC 696
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
+ +L D+A + K + D N +I+ + + E L+ T+
Sbjct: 697 RNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVS 756
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
Y M+ L+K G EEA+ + E SG + +R+ N +I
Sbjct: 757 TYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 797
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 137/338 (40%), Gaps = 25/338 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y AL+ Y +A S F ++K+ G ++Y ++ Y K+G+ EK V M
Sbjct: 376 SYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELM 435
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ + P+ SY I++YG++ L IL EME QP+IV + A+ K
Sbjct: 436 RRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQK 495
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
K VL AE R + + YN I Y S+G + L L+ +T +
Sbjct: 496 V----KIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVT 551
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP------NAVIIGYCNNGLVQNAEA 363
Y ++ K+ ++ EA L E D +IP ++VI Y G V AE+
Sbjct: 552 YNVLISGCCKMSKYGEALGFLDEM------MDLKIPLSKEVYSSVICAYSKQGQVTEAES 605
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
+ + G ++ + Y A E+ +AL + +E +PD +S+
Sbjct: 606 MFTKMKMVGCRPDVITYTAMIHAYDVAENWEKA-----SALFLEMETDDVQPDSIACSSL 660
Query: 424 LSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKA 460
+ G V +R IP N + + A
Sbjct: 661 MRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSA 698
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 154/414 (37%), Gaps = 44/414 (10%)
Query: 112 HGFLSAESYFSNLKDD------EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
HG + N+ DD + TY L+N +AL+ +KM E G+
Sbjct: 207 HGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPD 266
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI---CINSYGARSDLEGMEI 222
+T+N ++ Y + QY KV MK NI PD + I C+ G + ++I
Sbjct: 267 LVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNG--KAIDI 324
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
E + D T+ + H Y I+ + + + YN LI Y
Sbjct: 325 FNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAY 384
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
AS G E +++ K Y ++L A K G+ E+A KV + + +
Sbjct: 385 ASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNL 444
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA 402
NA+I Y + GL+ A IL ++ G S + A G+ + + A
Sbjct: 445 VSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSA 504
Query: 403 ----------------------------ALSVY--VEGKGWKPDPKVITSILSKLGDEGS 432
ALS+Y + K KPDP ++S
Sbjct: 505 AELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSK 564
Query: 433 VQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
+ F+ + + IP+++++Y + I A + G+ + + MK G D
Sbjct: 565 YGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPD 618
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 146/359 (40%), Gaps = 27/359 (7%)
Query: 78 FSQALEVSDWMNRKG-------IC-VFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEK 129
++A+E+ M R G IC + A C Q I V LSA + L+ +
Sbjct: 460 LTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSV---LSA----AELRGIKL 512
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
Y + + Y+ + DKALS +R M+ + +TYN ++ K +Y + L
Sbjct: 513 NTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFL 572
Query: 190 TEMKAKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
EM I Y I +Y G ++ E M ++ + +P ++ TY + H
Sbjct: 573 DEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVI----TYTAMIHA 628
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y A +KAS + + E Q D I + L+ + G ++VL L + + +
Sbjct: 629 YDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFN 688
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
N + M+ A L E E ++K E S + + N ++ +G ++ +
Sbjct: 689 NSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFY 748
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+V G +++++ AG + + ++ ++E G +P + SI S
Sbjct: 749 KIVASGAEINFYTYSILLKNLLAAGNWRKYIEVLQ-----WMEEAGLQPSVGMYRSISS 802
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 5/248 (2%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+T+ +LL R + A + F +M +GI TYN + K G E VL +
Sbjct: 53 KTFNSLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLD 112
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+AK + P+ +Y I+ Y E + +M+S I LD Y + Y+KA
Sbjct: 113 MEAKGVKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSM-RIQLDRVCYNTLLAIYVKAG 171
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV-LRLWDLEKTACKRYINRDY 310
+ ++V + EE +KD + YN LI+ Y G V + + D+ K + Y
Sbjct: 172 KYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSV-LTY 230
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T+++ K G H +A V +++ SG D + ++ I NGL++ A ++L D+ E
Sbjct: 231 STLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTE 290
Query: 371 KGKATTPN 378
G PN
Sbjct: 291 MG--IKPN 296
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 51/289 (17%)
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
L +FR+M + G+ T+N ++ S+ G E V EM I D ++Y I++
Sbjct: 37 LGYFRQMLKDGLCPDRKTFNSLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDA 96
Query: 211 YGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
++E +L +ME+ +P++V TY++ Y K ++A + +K +
Sbjct: 97 ICKCGNMELAMQVLLDMEAKGVKPNVV----TYSTLIDGYSKLEKYEEALKLCEKMKSMR 152
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAE 327
Q D + YN L+++Y +K G++ E
Sbjct: 153 IQLDRVCYNTLLAIY-----------------------------------VKAGKYAEIA 177
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
V E E G DT N++I GY G + +++D+ ++G A + +++ + Y
Sbjct: 178 NVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIY 237
Query: 388 FDAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEGSVQ 434
AG F +VY++ K G KPD + +S + L G ++
Sbjct: 238 SKAGMHGDAF-------NVYLDFKESGLKPDVVLFSSFIDTLAKNGLIE 279
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
EK TY +L+N Y +Q + D + M++ G+A S LTY+ ++ +YSK G + +
Sbjct: 189 EKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFN 248
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR---EMESQPHIV 234
V + K + PD + I++ +E +L EM +P++V
Sbjct: 249 VYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVV 298
>gi|387219245|gb|AFJ69331.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 521
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 12/270 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKE-----------MGIALSTLTYNDIMCLYSKTGQ 181
TY L++ Y + T+ A + R+M E + + + +TY +M Y+ G
Sbjct: 230 TYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGD 289
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
E VL M+ I P+ +Y + + +Y R D++G E +LR M S ++ + +TY
Sbjct: 290 VEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISA-YVAPNANTYT 348
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
+ H Y A +VL + E + + L+++YA+ G + + A
Sbjct: 349 TLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAA 408
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
+ T+L A + G+ AE+VL+ E N ++ GY + G V A
Sbjct: 409 GVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLTYNTLMNGYADKGDVAGA 468
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
E +L + KG + + + Y +AG
Sbjct: 469 EGVLARMRAKGVGPDETTLSTLLHAYAEAG 498
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 120/298 (40%), Gaps = 37/298 (12%)
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
T++ +M +Y+ E VL + A+ + PD +Y +++Y R D EG E +LR M
Sbjct: 195 TFHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRM 254
Query: 228 ----------ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
E ++ + TY + Y ++ + VL++ EE + + Y
Sbjct: 255 LEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTV 314
Query: 278 LISLYASLGN---KSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLK 331
L++ Y G+ VLR Y+ + Y T+L A G AE+VL
Sbjct: 315 LMTAYTLRGDVKGAEGVLRRM------ISAYVAPNANTYTTLLHAYTVNGNAAGAEEVLA 368
Query: 332 EWELSGNSYDTRIPNAVIIG-----YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
E +G +P A+ Y G V++A+ +L + G T ++ +
Sbjct: 369 RMEAAGV-----LPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNA 423
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
Y AG Q ++ E + + P ++++ D+G V E +A +R
Sbjct: 424 YVVAGDVGGAEQVLR-----RREAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMR 476
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 96/236 (40%), Gaps = 7/236 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ Y + + + +M+E IA + +TY +M Y+ G + VL M
Sbjct: 276 TYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRM 335
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + P+ +Y +++Y + G E +L ME+ ++ T+A+ Y
Sbjct: 336 ISAYVAPNANTYTTLLHAYTVNGNAAGAEEVLARMEAA-GVLPTALTFATLMTVYAARGE 394
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLY---ASLGNKSEVLRLWDLEKTACKRYINRD 309
++ A VL + E + ++ L++ Y +G +VLR + E
Sbjct: 395 VESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAE---AYPDFPLT 451
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y T++ G+ AE VL G D + ++ Y G AEA+L
Sbjct: 452 YNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGDPLGAEAVL 507
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 146/357 (40%), Gaps = 19/357 (5%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
ALL R R T A F +M G+A +T YN ++ + K G + ++T M A
Sbjct: 148 ALLTALARARMTATARRVFDEMARAGLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAA 207
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
+ D FSY I Y R + + R+ + I D T+ S+ H K + +
Sbjct: 208 GVTLDRFSYNTVIALY-CRKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKE 266
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLE 315
A+ + + D + Y LI Y GN E ++L + A Y +L
Sbjct: 267 AAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILR 326
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKAT 375
L + G +E ++L E + D N +I YC G + +A + + ++E G
Sbjct: 327 KLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQL 386
Query: 376 TPNSWAVVAAGYFDA----GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
++ + G+ A G E FQ + A G+ P+ V + ++ +
Sbjct: 387 NHFTYKALIHGFCKARELDGAKEAFFQMVDA---------GFSPNYSVFSWLVDGFCKKN 437
Query: 432 SVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDE 484
+ V A L + +P ++ +Y + I+ R G VD+ + D M++ G+ D
Sbjct: 438 NADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGL-VDQAQRVFDQMQSKGLVGDS 493
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 115/265 (43%), Gaps = 9/265 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y R ++A+ +M+ G+ TYN I+ + G ++V +L EM
Sbjct: 285 TYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEM 344
Query: 193 KAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
+ + D+ + IN+Y R D+ ++ + MES + L+ TY + H + KA
Sbjct: 345 DGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESG--LQLNHFTYKALIHGFCKAR 402
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-- 309
+D A + + + + +++L+ + N VL + D KR + D
Sbjct: 403 ELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPD---ELMKRGLPPDKA 459
Query: 310 -YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y +++ L + G ++A++V + + G D+ + + Y G A L+ +
Sbjct: 460 VYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGM 519
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKT 393
+ TP + + Y D +T
Sbjct: 520 TKNQLYITPQIYNCLCTSYADEKET 544
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 132/340 (38%), Gaps = 43/340 (12%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQ--LDLIGRVHGFLSAESYFSNLKDD-- 127
L + R A+ V D M +G+ AP HA L + R +A F +
Sbjct: 118 LAQSARPHDAVRVFDHMRARGL---APDAHACTALLTALARARMTATARRVFDEMARAGL 174
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ-YEKV- 185
T Y A+L+ ++ +A + +M G+ L +YN ++ LY + G YE +
Sbjct: 175 AATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMC 234
Query: 186 -----------PD----------------------VLTEMKAKNIFPDNFSYRICINSYG 212
PD + TEM A PDN +Y I+ Y
Sbjct: 235 ARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYC 294
Query: 213 ARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG 272
++E + ME+ ++ +TY + + + + +L + + R Q D
Sbjct: 295 RAGNVEEAVKLRGRMEAA-GMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADH 353
Query: 273 IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
+ N LI+ Y G+ + ++ + + + Y ++ K E + A++ +
Sbjct: 354 VTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQ 413
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+G S + + + ++ G+C AI ++L+++G
Sbjct: 414 MVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRG 453
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY L+ + ++ ++A + KM GI +TYN + Y++ G+ + D++ E
Sbjct: 200 RTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILE 259
Query: 192 MKAKNIFPDNFSYRICINSYGARSDL-EGMEII--LREMESQPHIVLDWSTYASAAHFYI 248
M+ + + P+ + I +N Y ++ E + + ++E+ P++V+ + S ++
Sbjct: 260 MQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVI----FNSLIKGFL 315
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYIN 307
D + L EE + D I ++ +++ ++S G + ++ D+ K + I+
Sbjct: 316 DITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIH 375
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
+ + + ++ GE E AE VL SG + I +I G+C+ G ++NA+ + E
Sbjct: 376 A-FSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEK 434
Query: 368 LVEKGKATTPNSWAVVAAGYFDA---GKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
+ E G + ++ + GY +A GK E Q M E KG P+ I
Sbjct: 435 MCEIGISPNLKTFETLIWGYAEARQPGKAEELLQLM--------EEKGVFPEKSTI 482
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 163/364 (44%), Gaps = 16/364 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y A++N + +A+ F+KMK+ G +T T+N ++ Y G+ E+ +L M
Sbjct: 131 YNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMS 190
Query: 194 AK-NIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
++ P++ +Y I + ++ ++ ++E +L +M + QP +V TY A Y +
Sbjct: 191 LDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVV----TYNILARAYAQ 246
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+A D++ + + + +++ Y GN E LR K
Sbjct: 247 KGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVI 306
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ ++++ + + + + ++ L E G D + ++ + + GL+ + I D+
Sbjct: 307 FNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMA 366
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+ G ++++++A GY AG+TE + + + G +P+ + T+I+S
Sbjct: 367 KAGIEPDIHAFSILAKGYVRAGETENAESVLTS-----MAKSGVRPNVVICTTIISGWCS 421
Query: 430 EGSVQDVEAFVAALRTV-IPMNRQMYHAFI--KANIRNGKGVDELLDSMKADGIDEDEET 486
G +++ + + + I N + + I A R +ELL M+ G+ ++ T
Sbjct: 422 AGKMENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEKST 481
Query: 487 KEIL 490
+++
Sbjct: 482 IQLV 485
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 116/250 (46%), Gaps = 11/250 (4%)
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-L 297
TY + K + ++ K EE + D I YN +I+ ++ GN E ++++ +
Sbjct: 95 TYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKM 154
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN-SYDTRIPNAVIIGYCNNG 356
+ T CK + + T+++ G+ EE K+L L G+ + R N ++ +C+
Sbjct: 155 KDTGCKPTTS-TFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKK 213
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
++ A +L +V G ++ ++A Y G+T R L + ++ + P+
Sbjct: 214 NIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRA-----EDLILEMQYEKVAPN 268
Query: 417 PKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKA--NIRNGKGVDELLD 473
+ I++ EG++ + FV ++ + + N ++++ IK +I + GVDE L
Sbjct: 269 ERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALT 328
Query: 474 SMKADGIDED 483
M+ G+ D
Sbjct: 329 LMEEYGVKPD 338
>gi|242055653|ref|XP_002456972.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
gi|241928947|gb|EES02092.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
Length = 821
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 1/253 (0%)
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
G+LL C + + + HF+K +++G+ L + YN M Y K G + +L EM A
Sbjct: 373 GSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYNVAMDAYCKLGNMNEAVKLLNEMMA 432
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
+ PD Y IN Y + + E + +M + +I D TY + Y + L+
Sbjct: 433 GGLVPDKIHYTCLINGYCLKGETENAWQVFEQM-LKANIKPDVVTYNILSSGYSRNGLVM 491
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITML 314
K D+L+ ++ + + + Y I+ + GN SE L+++ + I+ Y +M+
Sbjct: 492 KVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDNIDVLYSSMV 551
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
+ G + A + GN D + +I G C + VQ A + ++EK
Sbjct: 552 CGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTVCSMMLEKNVV 611
Query: 375 TTPNSWAVVAAGY 387
S++ + + Y
Sbjct: 612 PHVISYSKLISAY 624
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 116/291 (39%), Gaps = 42/291 (14%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L+N Y + +T+ A F +M + I +TYN + YS+ G KV D+L M
Sbjct: 442 YTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILSSGYSRNGLVMKVFDLLEHMM 501
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ + P++ +Y I I + +L E++ +E + +D Y+S Y+ +
Sbjct: 502 DQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDNID-VLYSSMVCGYLHSGWT 560
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
D A + + ++ D + + LI+ L +V T C + ++ +
Sbjct: 561 DHAYMLFLRVAKQGNMVDHLSCSKLIN---GLCRDEKVQE----ASTVCSMMLEKNVVPH 613
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
+ + KL I YC + ++NA D+VE+G
Sbjct: 614 VISYSKL----------------------------ISAYCQSRDMRNAHLWFHDMVERGL 645
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+ ++ ++ GY G+ + + L V + G KPD T +L
Sbjct: 646 SDV-TAYTILMNGYCKVGQLQEACE-----LFVQMVNLGIKPDVVAYTVLL 690
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 153/380 (40%), Gaps = 41/380 (10%)
Query: 146 QTDKALSHFR---KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD------VLTEMKAKN 196
Q +KA FR M EMG+ L Y+ + G+Y+ + VL E+ +
Sbjct: 235 QANKADEAFRVWVGMIEMGVKLDVQGYSSFIIGLCDCGKYDLAYNMVRRYAVLQEISQER 294
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ + F+Y + I+ LE E +L E++++ D Y+ H + K ++KA
Sbjct: 295 VPIEAFAYNMVIDGLCKEMKLEEAEKVL-EIKTRHGSTPDLYGYSYLIHSHCKMGNLEKA 353
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASL---GNKSEVLRLWDLEKTACKRYINRDYITM 313
E+ + I + + SL L G SEV+ + + Y
Sbjct: 354 ---WYHIEDMVSHGIEINCHIVGSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYNVA 410
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
++A KLG EA K+L E G D +I GYC G +NA + E +++
Sbjct: 411 MDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANI 470
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI------------- 420
++ ++++GY G + F ++ + +G +P+
Sbjct: 471 KPDVVTYNILSSGYSRNGLVMKVFDLLEHMMD-----QGLEPNSLTYGIAIAGFCRGGNL 525
Query: 421 --TSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHA---FIKANIRNGKGVDELLDSM 475
+L + +E + +++ +++ + HA F++ + G VD L S
Sbjct: 526 SEAEVLFNIVEEKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVA-KQGNMVDHLSCSK 584
Query: 476 KADGIDEDEETKEI-LVCTM 494
+G+ DE+ +E VC+M
Sbjct: 585 LINGLCRDEKVQEASTVCSM 604
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 111/287 (38%), Gaps = 34/287 (11%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ Y+ TD A F ++ + G + L+ + ++ + + ++ V + M
Sbjct: 547 YSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTVCSMML 606
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
KN+ P SY I++Y D+ + +M + + D + Y + Y K +
Sbjct: 607 EKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERG--LSDVTAYTILMNGYCKVGQL 664
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTACKRYINRDYIT 312
+A ++ + + D + Y L+ G+ E L+ W + + R
Sbjct: 665 QEACELFVQMVNLGIKPDVVAYTVLLD-----GHLKETLQQGWQGIAKERRTFFLRT--- 716
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+H+ +KE E+ D +I G C ++ A + ++++ KG
Sbjct: 717 ---------KHKVLLSSMKEMEIEP---DVTCYTVLIYGQCKAEYLEEARGLFDEMLAKG 764
Query: 373 KATTPNSWAVVAAGYFDAG---KTERGFQCMKAALSVYVEGKGWKPD 416
+++ + GY G K E FQ M KG KPD
Sbjct: 765 LTPDVDAYTTLINGYCSQGEIAKAEDLFQEMI--------DKGMKPD 803
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 24/173 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y L++ Y + R A F M E G++ T Y +M Y K GQ ++ ++ +M
Sbjct: 616 SYSKLISAYCQSRDMRNAHLWFHDMVERGLSDVT-AYTILMNGYCKVGQLQEACELFVQM 674
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEII-------------------LREMESQPHI 233
I PD +Y + ++ + + +G + I ++EME +P
Sbjct: 675 VNLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLSSMKEMEIEP-- 732
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
D + Y + KA +++A + + + D Y LI+ Y S G
Sbjct: 733 --DVTCYTVLIYGQCKAEYLEEARGLFDEMLAKGLTPDVDAYTTLINGYCSQG 783
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 9/258 (3%)
Query: 120 YFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYS 177
YF + D +T+ +LL+ R + A + F +M +GI TYN +
Sbjct: 291 YFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAIC 350
Query: 178 KTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH--IVL 235
K G E VL +M+AKN+ P+ +Y I+ Y S LE + L+ E I L
Sbjct: 351 KCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGY---SKLEKYDEALKLYEKMKSLGIQL 407
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV-LRL 294
D Y + Y+KA + + V + E+ +KD + YN LI+ Y G V +
Sbjct: 408 DRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLV 467
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
D+ + + Y T+++ K G H +A V +++ SG D + ++ I
Sbjct: 468 QDMRRRGVAPSV-LTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAK 526
Query: 355 NGLVQNAEAILEDLVEKG 372
NGLV+ A ++L D+ E G
Sbjct: 527 NGLVEWALSLLNDMTEMG 544
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 131/302 (43%), Gaps = 11/302 (3%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG-QYEKVPDVLTEMKA 194
AL++ Y R ++A+ MK G+ +T+TYN ++ K G +M
Sbjct: 238 ALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDACGKGGVDLRFTLGYFRQMLR 297
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
+ PD ++ +++ LE + EM I D TY + K I+
Sbjct: 298 DRLCPDRKTFNSLLSACSRAGHLEDARALFDEM-IHLGIGRDIYTYNTFIDAICKCGNIE 356
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITML 314
A VL E + + + + Y+ LI Y+ L E L+L++ K+ + Y T+L
Sbjct: 357 LAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVL 416
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
+K G++ E V E E SG DT N++I GY G + +++D+ +G A
Sbjct: 417 AIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVA 476
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEGS 432
+ +++ + Y AG F +VY++ K G KPD + +S + L G
Sbjct: 477 PSVLTYSTLIDIYSKAGMHGDAF-------NVYLDFKESGLKPDVVLFSSFIDTLAKNGL 529
Query: 433 VQ 434
V+
Sbjct: 530 VE 531
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 7/209 (3%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
T I GN ++ LD KN K V +I K +++ +AL++ + M
Sbjct: 344 TFIDAICKCGNIELAMQVLLDMEAKN-VKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKS 402
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTD 148
GI + C + V L + + + ++D EK TY +L+N Y +Q + D
Sbjct: 403 LGIQLDRVCYNTV-LAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLD 461
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
+ M+ G+A S LTY+ ++ +YSK G + +V + K + PD + I
Sbjct: 462 IVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFI 521
Query: 209 NSYGARSDLE-GMEII--LREMESQPHIV 234
++ +E + ++ + EM +P++V
Sbjct: 522 DTLAKNGLVEWALSLLNDMTEMGIKPNVV 550
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 168/409 (41%), Gaps = 27/409 (6%)
Query: 51 DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGR 110
D ++NG K + +I+ R +F + + V D + G F P V + +
Sbjct: 378 DEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAG---FVP--DVVTWNTLLA 432
Query: 111 VHGFLSAESYFSNLKDDEKTY------QTYGALLNCYVRQRQTDKALSHFRKMKEMGIAL 164
V G +S S + + K TY +L++ Y R D+++ +++M E GI
Sbjct: 433 VFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYP 492
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGM---- 220
TYN ++ ++ G++E+ + EM+ + PD SY +++Y L+ M
Sbjct: 493 DISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALS 552
Query: 221 -EIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+I ++ES +V S + NL + L+ R + N ++
Sbjct: 553 EDIYAEKIESHHGLVKTLVLVNSKVN-----NLSETEKAFLELGRRRCSLDINV-LNAMV 606
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
S+Y +V + L K + Y +++ +LG+ E+ E +L E + SG
Sbjct: 607 SVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGAR 666
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC 399
D N +I Y G ++ A + ++ G ++ + Y E
Sbjct: 667 PDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDL 726
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
++ Y+ +G KP+ + SIL + G + D ++F++ L + P
Sbjct: 727 VR-----YMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQLHP 770
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 149/353 (42%), Gaps = 37/353 (10%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG-ARS 215
MK GI L TYN ++ + Y++ V EM+A PD ++ ++ YG AR
Sbjct: 240 MKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARM 299
Query: 216 DLEGMEIILREME---SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG 272
E + +L+EME P +V TY S Y+K L+ +A+++ ++ E + Q D
Sbjct: 300 HDEAIG-VLKEMELGGCPPSVV----TYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDV 354
Query: 273 IGYNFLIS-------LYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKL----G 321
I Y LIS + A++G E+LR CK + AL+KL G
Sbjct: 355 ITYTTLISGLDRAGKIDAAIGTYDEMLR------NGCK-----PNLCTYNALIKLHGVRG 403
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+ E V + +G D N ++ + NGL + +++ + G +++
Sbjct: 404 KFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYV 463
Query: 382 VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
+ + Y G ++ + K + G PD ++LS L G + E A
Sbjct: 464 SLISSYSRCGLFDQSMEIYKRMIEA-----GIYPDISTYNAVLSALARGGRWEQAEKLFA 518
Query: 442 ALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCTM 494
+ + ++ ++ + N K +D+ + ++ D E E+ LV T+
Sbjct: 519 EMENLDCRPDELSYSSLLHAYANAKKLDK-MKALSEDIYAEKIESHHGLVKTL 570
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 141/348 (40%), Gaps = 15/348 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++C R +A F +M+ G +T+N ++ +Y K +++ VL EM
Sbjct: 251 TYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEM 310
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ P +Y I+SY L+ + EME QP ++ TY + +
Sbjct: 311 ELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVI----TYTTLISGLDR 366
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A ID A + + + YN LI L+ G E++ ++D ++A
Sbjct: 367 AGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVT 426
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ T+L + G E V KE + SG + ++I Y GL + I + ++
Sbjct: 427 WNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMI 486
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E G +++ V + G+ E+ + L +E +PD +S+L +
Sbjct: 487 EAGIYPDISTYNAVLSALARGGRWEQAEK-----LFAEMENLDCRPDELSYSSLLHAYAN 541
Query: 430 EGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKA 477
+ ++A + + +H +K + V+ L ++ KA
Sbjct: 542 AKKLDKMKALS---EDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKA 586
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 162/408 (39%), Gaps = 66/408 (16%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +LL+ Y + R D+A+ ++M+ G S +TYN ++ Y K G ++ ++ EM
Sbjct: 286 TFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEM 345
Query: 193 KAKNIFPDNFSYRICINS-----------------------------------YGARSDL 217
+ K I PD +Y I+ +G R
Sbjct: 346 EVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKF 405
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
M + ++ S V D T+ + + + L + S V K+ ++ + Y
Sbjct: 406 PEMMAVFDDLRSA-GFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVS 464
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYIN-------RDYITMLEALMKLGEHEEAEKVL 330
LIS Y+ G L+D KR I Y +L AL + G E+AEK+
Sbjct: 465 LISSYSRCG-------LFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLF 517
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL----VEKGKATTPNSWAVVAAG 386
E E D ++++ Y N + +A+ ED+ +E + +V +
Sbjct: 518 AEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLV-KTLVLVNSK 576
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR-T 445
+ +TE+ F + + + D V+ +++S G V+ VE ++ ++ +
Sbjct: 577 VNNLSETEKAF--------LELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGS 628
Query: 446 VIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
I ++ Y++ + R G + + +L +K+ G D + ++
Sbjct: 629 SINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMI 676
>gi|414878622|tpg|DAA55753.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
Length = 573
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 1/251 (0%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL C + + + HF+K +++G+ L + YN M Y K G + +L EM A +
Sbjct: 127 LLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLNEMMAGS 186
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ PD Y IN Y + + E + EM + +I D TY A Y + L+ K
Sbjct: 187 LVPDKIHYTCLINGYCLKGETENAWQVFEEM-LKANIKPDVVTYNILASGYSRNGLVMKV 245
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
D+L+ ++ + + + Y I+ + GN SE L+++ + IN Y +M+
Sbjct: 246 FDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYGSMVCG 305
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
+ G + A + GN D + +I G C + V A + + ++EK
Sbjct: 306 YLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEKNVVPD 365
Query: 377 PNSWAVVAAGY 387
S++ + + Y
Sbjct: 366 VISYSKLISAY 376
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 121/294 (41%), Gaps = 27/294 (9%)
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
V+LD VHGF S+ L D K Y VR+ + +S R
Sbjct: 5 GVKLD----VHGF---SSFIIGLCDCGKFDLAYNM-----VRRYAVLQEISQER------ 46
Query: 162 IALSTLTYN---DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
+ + + YN D +C K + EKV ++ T + PD +SY I+S+ +LE
Sbjct: 47 VPIEAMAYNMVIDGLCKEMKLKEAEKVLEIKTRHGSA---PDLYSYSYLIHSHCKMGNLE 103
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+ +M S I ++ A K ++ + +K + DG+ YN
Sbjct: 104 KAWYHVEDMVSHG-IEINCYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIA 162
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINR-DYITMLEALMKLGEHEEAEKVLKEWELSG 337
+ Y LGN +E ++L + E A ++ Y ++ GE E A +V +E +
Sbjct: 163 MDAYCKLGNMNEAVKLLN-EMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKAN 221
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
D N + GY NGLV ILE ++++G ++ + AG+ G
Sbjct: 222 IKPDVVTYNILASGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGG 275
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 116/294 (39%), Gaps = 48/294 (16%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L+N Y + +T+ A F +M + I +TYN + YS+ G KV D+L M
Sbjct: 194 YTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNGLVMKVFDILEHMM 253
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ + P++ +Y I I + +L E++ +E + ++ Y S Y+ +
Sbjct: 254 DQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNIN-VLYGSMVCGYLHSGWT 312
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN---RDY 310
D A + + A GN +++ +C + IN RD
Sbjct: 313 DHAYMLFLRV-------------------AKQGNM--------VDRLSCSKLINGLCRDE 345
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
K+GE K++ E + D + +I YC + NA D+VE
Sbjct: 346 --------KVGEASTVCKMMLEKNVVP---DVISYSKLISAYCQTRDMHNARLWFHDMVE 394
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+G + + V+ GY G+ + + L V + G KPD T +L
Sbjct: 395 RGLSDVI-VYTVLMNGYCKVGRLQEACE-----LFVQMINLGIKPDVVAYTVLL 442
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 149/369 (40%), Gaps = 44/369 (11%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPD------VLTEMKAKNIFPDNFSYRICINS 210
M EMG+ L ++ + G+++ + VL E+ + + + +Y + I+
Sbjct: 1 MIEMGVKLDVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDG 60
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
L+ E +L E++++ D +Y+ H + K ++KA E+ +
Sbjct: 61 LCKEMKLKEAEKVL-EIKTRHGSAPDLYSYSYLIHSHCKMGNLEKA---WYHVEDMVSH- 115
Query: 271 DGIGYN-----FLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEE 325
GI N +L+ LG SEV+ + + Y ++A KLG E
Sbjct: 116 -GIEINCYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNE 174
Query: 326 AEKVLKEWELSGNSYDTRIPNAVII-GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
A K+L E ++G+ +I +I GYC G +NA + E++++ ++ ++A
Sbjct: 175 AVKLLNEM-MAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILA 233
Query: 385 AGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF--VAA 442
+GY G + F ++ + +G +P+ ++ G++ + E +
Sbjct: 234 SGYSRNGLVMKVFDILEHMMD-----QGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVE 288
Query: 443 LRTVIPMN----------------RQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEET 486
R + +N Y F++ + G VD L S +G+ DE+
Sbjct: 289 ERGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVA-KQGNMVDRLSCSKLINGLCRDEKV 347
Query: 487 KEI-LVCTM 494
E VC M
Sbjct: 348 GEASTVCKM 356
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 174/422 (41%), Gaps = 73/422 (17%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLK 125
++ L K+ RF +V M +G +P + +D R FL A F +
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGA---SPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220
Query: 126 DDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ + T Y L+ + + +A S FR M+ G+ + TYN +M Y K +
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
K ++ EM + P+ ++ I I+ ++D EM S ++D +++
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGILIDGL-CKTD---------EMVSARKFLIDMASFGVV 330
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTAC 302
+ ++ YN LI Y GN SE L L ++EK
Sbjct: 331 PNIFV--------------------------YNCLIDGYCKAGNLSEALSLHSEIEK--- 361
Query: 303 KRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
I D T +++ L + EEA+ +L+E + G + N +I GYC G ++
Sbjct: 362 -HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG--KGWKPDP 417
A + + EKG +++ + GY AGK M+AA+ +Y E KG PD
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK-------MEAAMGLYTEMVIKGLLPDV 473
Query: 418 KVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKA 477
T+++ +G+ + EAF ++++M A + N+ + L+D +
Sbjct: 474 VAYTALIDGHFKDGNTK--EAF--------RLHKEMQEAGLHPNVFT---LSCLIDGLCK 520
Query: 478 DG 479
DG
Sbjct: 521 DG 522
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 110/274 (40%), Gaps = 20/274 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y L++ Y + +ALS ++++ I TY+ ++ + E+ +L EM
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394
Query: 193 KAKNIFPDNFSYRICINSYGARSDLE-GMEII--LREMESQPHIVLDWSTYASAAHFYIK 249
K K P+ +Y I+ Y ++E +E+ + E +P+I+ T+++ Y K
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNII----TFSTLIDGYCK 450
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A ++ A + + + D + Y LI + GN E RL + A
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFT 510
Query: 310 YITMLEALMKLGEHEEAEKVL-------------KEWELSGNSYDTRIPNAVIIGYCNNG 356
+++ L K G +A K+ E + S S + + A+I G C +G
Sbjct: 511 LSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDG 570
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+ A D+ G + V+ G+F A
Sbjct: 571 RIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRA 604
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 116/250 (46%), Gaps = 11/250 (4%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
AL F + E+G+ +T +YN I + G+ + +L +M+ + PD SY IN
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVIN 296
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
Y +L+ + ++ EM+ + + + TY K + +A VL++
Sbjct: 297 GYCQVGELQRVLKLIEEMQIKG-LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA 355
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEA 326
DG+ Y LI + LGN S RL+D + KR I+ D+IT ++ L + G EA
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQ---KRKISPDFITYTAVICGLCQTGRVMEA 412
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVA 384
+K+ E D A+I GYC G ++ A ++ +++ G TPN ++ +A
Sbjct: 413 DKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMG--LTPNIVTYTALA 470
Query: 385 AGYFDAGKTE 394
G G+ +
Sbjct: 471 DGLCKCGEVD 480
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 153/365 (41%), Gaps = 15/365 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y ++N Y + + + L +M+ G+ + TYN ++ L KTG+ + VL EM
Sbjct: 290 SYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM 349
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ I PD Y I+ + ++ + EM+ + I D+ TY + +
Sbjct: 350 ISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKR-KISPDFITYTAVICGLCQTGR 408
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+ +A + + + + D + Y LI Y G E L + L+ + Y
Sbjct: 409 VMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT--Y 466
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+ + L K GE + A ++L E G + N+++ G C G + A +++D+
Sbjct: 467 TALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV 526
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G ++ + Y + + R + ++ L + +P +++
Sbjct: 527 AGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD-----RELQPTVVTFNVLMNGFCMS 581
Query: 431 GSVQDVEAFVAAL--RTVIPMNRQMYHAFIKA-NIRNG-KGVDELLDSMKADGIDEDEET 486
G ++D E + + + ++P N Y++ IK IRN + E+ M A G+ D T
Sbjct: 582 GMLEDGEKLLKWMLEKGIMP-NATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNT 640
Query: 487 KEILV 491
IL+
Sbjct: 641 YNILI 645
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 122/283 (43%), Gaps = 14/283 (4%)
Query: 216 DLEGMEIILREMESQPHIVLDWST--YASAAHFYIKANLIDKASDVLKKAEERLEQKDGI 273
DL+G++I L+ P + + W+T Y H + + +A +L + E R D I
Sbjct: 230 DLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVI 289
Query: 274 GYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEW 333
Y+ +I+ Y +G VL+L + + + Y ++ L K G+ EAE+VL+E
Sbjct: 290 SYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM 349
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
G + D I +I G+C G V +A + +++ ++ + ++ V G G+
Sbjct: 350 ISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRV 409
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV---AALRTVIPMN 450
+ + K +PD T+++ EG ++ EAF L+ + N
Sbjct: 410 MEADKLFHEMVC-----KRLEPDEVTYTALIDGYCKEGKMK--EAFSLHNQMLQMGLTPN 462
Query: 451 RQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETKEILV 491
Y A + G+ +ELL M G++ + T LV
Sbjct: 463 IVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLV 505
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 142/374 (37%), Gaps = 52/374 (13%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L++ + + A F +M++ I+ +TY ++C +TG+ + + EM
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 420
Query: 194 AKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIV---------------- 234
K + PD +Y I+ Y G + + + +M P+IV
Sbjct: 421 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 480
Query: 235 ---------------LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
L+ TY S + KA ID+A ++K E D + Y L+
Sbjct: 481 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 540
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELS 336
Y E++R +L + R + +T ++ G E+ EK+LK W L
Sbjct: 541 DAYCK---SREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLK-WMLE 596
Query: 337 -GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G + N++I YC ++ I + KG N++ ++ G+ A
Sbjct: 597 KGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARN--- 653
Query: 396 GFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQ 452
MK A ++ + GKG+ +++ + E F R + +R+
Sbjct: 654 ----MKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADRE 709
Query: 453 MYHAFIKANIRNGK 466
+Y+ F N GK
Sbjct: 710 IYNIFADINYDEGK 723
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 7/217 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+N + D+A+ + M+ G +TY +M Y K+ + + ++L +M
Sbjct: 500 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 559
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + P ++ + +N + LE E +L+ M + I+ + +TY S Y N
Sbjct: 560 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM-LEKGIMPNATTYNSLIKQYCIRNN 618
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN---RD 309
+ +++ + + DG YN LI + N E W L + + N
Sbjct: 619 MRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA---WFLHRDMVGKGFNLTVSS 675
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
Y +++ K + EA ++ ++ G D I N
Sbjct: 676 YNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 712
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 149/341 (43%), Gaps = 15/341 (4%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
ALL+ + + D + F+ M GI S TYN ++ K G E + T+MK
Sbjct: 26 ALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEA 85
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIKANL 252
PD +Y I+ +G L+ I +M + P ++ TY + + + K
Sbjct: 86 GFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVI----TYNALINCFCKFER 141
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYI 311
+ KA + L + + + + + Y+ I + G E ++ + D+ + A Y
Sbjct: 142 MPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN-EFTYT 200
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++++A K G EA K+++E +G + A++ G C G ++ AE + ++
Sbjct: 201 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 260
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G A ++ + G+ A + E +K ++ K KPD + +IL L +E
Sbjct: 261 GVAPNQETYTALVHGFIKAKEMEYAKDILKE-----MKEKCIKPDLLLYGTILWGLCNES 315
Query: 432 SVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGKGVDEL 471
+++ + + ++ + I N +Y + A ++G+ + L
Sbjct: 316 RLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 356
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 162/384 (42%), Gaps = 69/384 (17%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+NC+ + + KA +MK G+ + +TY+ + + K G ++ +M
Sbjct: 128 TYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM 187
Query: 193 KAKNIFPDNFSYRICINSYGARSDL-EGMEII---------------------------L 224
+ + P+ F+Y I++ +L E ++++ +
Sbjct: 188 RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRM 247
Query: 225 REMESQPHIVL------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+E E +L + TY + H +IKA ++ A D+LK+ +E+ + D + Y
Sbjct: 248 KEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYG-- 305
Query: 279 ISLYASLGNKSEV----LRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLK 331
++ L N+S + L + +++++ IN + Y T+++A K G+ EA +L+
Sbjct: 306 -TILWGLCNESRLEEAKLLIGEIKESG----INTNAVIYTTLMDAYFKSGQATEALTLLE 360
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
E ++ G C N + A+ + +++++KG ++ + G G
Sbjct: 361 EML------------DLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHG 408
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPM 449
+ + + G + D T+++ L G VQ + + + V+P
Sbjct: 409 NLQEALNLRDRMIEI-----GMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLP- 462
Query: 450 NRQMYHAFIKANIRNGKGVDELLD 473
+ +Y IK GK VDE L+
Sbjct: 463 DEVVYMCLIKKYYALGK-VDEALE 485
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 99/267 (37%), Gaps = 48/267 (17%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY AL++ +++ ++ + A ++MKE I L Y I+ + E+ ++ E
Sbjct: 267 ETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGE 326
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
+K I + Y +++Y +L EM LD K N
Sbjct: 327 IKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM-------LDL------VDGLCKNN 373
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+ A + + ++ D I Y LI GN E L L D
Sbjct: 374 CFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRD--------------- 418
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
M+E M+L H +Y A+I G ++G VQ A +L++++ K
Sbjct: 419 RMIEIGMELDLH---------------AY-----TALIWGLSHSGQVQKARNLLDEMIGK 458
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQ 398
G + + Y+ GK + +
Sbjct: 459 GVLPDEVVYMCLIKKYYALGKVDEALE 485
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 141/296 (47%), Gaps = 17/296 (5%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ-YEKVPDVLTEMKA 194
A++N + + D+A+ F+KMKE G +T TYN ++ + G+ YE + L EM
Sbjct: 97 AMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMK--LLEMMG 154
Query: 195 K--NIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ N+ P++ +Y I I ++ + LE +L +M + QP +V TY + A Y +
Sbjct: 155 QDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVV----TYNTMARAYAQ 210
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
++A ++ K + + + +IS Y GN E LR K
Sbjct: 211 NGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVV 270
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ ++++ + + ++ L E G D + ++ + + GL++N E I D+V
Sbjct: 271 FNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMV 330
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+ G ++++++A GY AG+ R + + ++S Y G +P+ + T+I+S
Sbjct: 331 KAGIEPDIHAYSILAKGYVRAGQ-PRKAEALLTSMSKY----GVQPNVVIFTTIIS 381
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 157/366 (42%), Gaps = 24/366 (6%)
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
+T L+N + + + +A + F + E G + +TY ++ ++ +++ +P +
Sbjct: 20 QTVHARTKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPAL 79
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEII--LREMESQPHIVLDWSTYASAAH 245
L+++ + PD+ IN++ + E M+I ++E +P STY +
Sbjct: 80 LSKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTT----STYNTLIK 135
Query: 246 FYIKANLIDKASDVLKK--AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
+ A ++ +L+ +E ++ D YN LI + + K ++ W++
Sbjct: 136 GFGIAGRPYESMKLLEMMGQDENVKPNDRT-YNILIQAWCT---KKKLEEAWNVLHKMVA 191
Query: 304 RYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
I D Y TM A + GE E AE+++ + + + R +I GYC G +
Sbjct: 192 SGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPE 251
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
A L + E G P + + GY D T + AL++ +E G KPD
Sbjct: 252 ALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDT----NGVDEALTL-MEEFGIKPDVVTF 306
Query: 421 TSILSKLGDEGSVQDVEA-FVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKA 477
++I++ G +++ E F ++ I + Y K +R G + + LL SM
Sbjct: 307 STIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSK 366
Query: 478 DGIDED 483
G+ +
Sbjct: 367 YGVQPN 372
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 124/274 (45%), Gaps = 16/274 (5%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
N+K +++TY L+ + +++ ++A + KM GI +TYN + Y++ G+
Sbjct: 158 NVKPNDRTYNI---LIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGET 214
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILR--EMESQPHIVLDWST 239
E+ ++ +M + P+ + I I+ Y ++ E + + R E+ P+ V+
Sbjct: 215 ERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVV---- 270
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG---NKSEVLRLWD 296
+ S Y+ + + L EE + D + ++ +++ ++S G N E+ D
Sbjct: 271 FNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFN--D 328
Query: 297 LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
+ K + I+ Y + + ++ G+ +AE +L G + I +I G+C G
Sbjct: 329 MVKAGIEPDIHA-YSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAG 387
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+ A + E + E G + ++ + GY +A
Sbjct: 388 KMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEA 421
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 156/358 (43%), Gaps = 11/358 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y +Q + ++M + G + +TYN +M K+G+Y ++ M
Sbjct: 308 TYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMM 367
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ P +F++ + I+ + L+ + L ++ + + D TY +AN
Sbjct: 368 LRRDCKPSHFTFNLMIDMFCKVGQLD-LAYELFQLMTDRGCLPDIYTYNIMISGACRANR 426
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
ID A +L++ E D + YN ++S E ++++ + T
Sbjct: 427 IDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCST 486
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ L K ++AEK+L+E E +G++ D +I G+C + + A ++++KG
Sbjct: 487 LIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG 546
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
T ++++V + + G +K L +G PD V TS++ L S
Sbjct: 547 CVPTVITYSIVIDKLCKSARVRDGCMLLKTMLE-----RGVTPDAIVYTSVIDGLCKSDS 601
Query: 433 VQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEET 486
+ E + +T Y+ + + + +DE LL+ M++DG D T
Sbjct: 602 YDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSR-LDEAIHLLEVMESDGCLPDTVT 658
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 162/407 (39%), Gaps = 49/407 (12%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLI--GRVHGFLSAESYFSNL- 124
+I K + F QA + D M ++GI + + L GRV SA ++ ++
Sbjct: 173 LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVD---SALVHYRDMQ 229
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
++ + TY L++ + + A M E G A + +TYN ++ + K G ++
Sbjct: 230 RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDE 289
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIV------- 234
+ +M + PD F+Y I I+ Y + + +L+EM +P+ +
Sbjct: 290 AVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMD 349
Query: 235 --------LDWSTYAS--------AAHF--------YIKANLIDKASDVLKKAEERLEQK 270
+D A +HF + K +D A ++ + +R
Sbjct: 350 SLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLP 409
Query: 271 DGIGYNFLISLYASLGNKSEVLR--LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
D YN +IS A N+ + R L + + C + Y +++ L K + +EA +
Sbjct: 410 DIYTYNIMIS-GACRANRIDDARQLLERMTEAGCPPDVVT-YNSIVSGLCKASQVDEAYE 467
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
V + G D + +I G C + + +AE +L ++ G A ++ ++ G+
Sbjct: 468 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 527
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
A + ++ L KG P + ++ KL V+D
Sbjct: 528 KADQLDKSLAFFSEMLD-----KGCVPTVITYSIVIDKLCKSARVRD 569
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 151/411 (36%), Gaps = 52/411 (12%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L VK G + ++ L K ++ A ++ M R+ C + + +D+
Sbjct: 329 LQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD-CKPSHFTFNLMIDMFC 387
Query: 110 RVHGFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
+V A F + D TY +++ R + D A +M E G +
Sbjct: 388 KVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVV 447
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
TYN I+ K Q ++ +V ++ F D + I+ L+ E +LREM
Sbjct: 448 TYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREM 507
Query: 228 E---SQPHIVLDWSTYASAAHFYIKANLIDKA---------------------------- 256
E S P +V Y H + KA+ +DK+
Sbjct: 508 ERNGSAPDVV----AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 563
Query: 257 -------SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK-TACKRYINR 308
+LK ER D I Y +I + E L+ L K T C +
Sbjct: 564 SARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVT 623
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y +++ L K+ +EA +L+ E G DT N+V G+ + A + + +
Sbjct: 624 -YNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAM 682
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
+G + TP ++++ K ++ + + AL G DP++
Sbjct: 683 KSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEA-----GADVDPEI 728
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 142/350 (40%), Gaps = 48/350 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T LL+ +VR+++ +A F+ + + ++TY+ ++ + K +++ +L EM
Sbjct: 134 TCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM 193
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME--SQPHIVLDWSTYASAAHFYIKA 250
+ + I P N Y I ++ + R+M+ P ++ TY K+
Sbjct: 194 EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVI----TYTILVDALCKS 249
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTA------- 301
I AS +L+ E + + YN LI+ + LGN E + L++ LE +
Sbjct: 250 ARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTY 309
Query: 302 -------CKRYINRD-------------------YITMLEALMKLGEHEEAEKVLKEWEL 335
CK+ +D Y T++++L+K G++ +A L + L
Sbjct: 310 NILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFN-LAQMML 368
Query: 336 SGNSYDTRIP-NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
+ + N +I +C G + A + + + ++G ++ ++ +G A + +
Sbjct: 369 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 428
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
Q ++ + G PD SI+S L V + LR
Sbjct: 429 DARQLLER-----MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 473
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 5/227 (2%)
Query: 148 DKALSHFR-KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
DKA+ F + G S T N ++ + + + ++ D+ + PD+ +Y
Sbjct: 113 DKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYST 172
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
IN + D + +L EME + IV + Y + +D A V + +R
Sbjct: 173 LINGFCKARDFQQAYRLLDEMEKR-GIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQR 230
Query: 267 LEQKDGIGYNFLISLYASLGNKSEV-LRLWDLEKTACKRYINRDYITMLEALMKLGEHEE 325
I Y L+ S+ L L D+ + C + Y T++ KLG +E
Sbjct: 231 NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVT-YNTLINGFCKLGNMDE 289
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
A + + + S D N +I GYC Q+ +L+++V+ G
Sbjct: 290 AVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYG 336
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 193/463 (41%), Gaps = 58/463 (12%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY--FSNLKD----- 126
K ++A ++ M K IC P V + GFL ES S L D
Sbjct: 396 KNGNMAKAYDLYTQMKNKNIC---PTVFIVN----SLIRGFLKVESREEASKLFDEAVAC 448
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
D TY +LL+ ++ + +A + ++KM + G+A + ++YN ++ + + G +
Sbjct: 449 DIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAA 508
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
V ++M + P+ +Y I ++ Y D E + M + + D+ TY +
Sbjct: 509 SVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDF-TYNIKING 567
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
K +A D+LKK E+ + YN ++ + G+ S L + + C+ +
Sbjct: 568 LCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAY---REMCESGV 624
Query: 307 NRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ + Y T++ K + A K+ E G D A+I G+C ++ A
Sbjct: 625 SPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASW 684
Query: 364 ILEDLVEKGKATTPNS--WAVVAAGYFDAGKTE-----------RGFQC----------- 399
+ +L++ G +PNS + + +GY + E G C
Sbjct: 685 LFSELLDGG--LSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDG 742
Query: 400 ------MKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMN 450
+ AL +Y E KG PD + T +++ L +G +++ + +A + R I N
Sbjct: 743 LLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPN 802
Query: 451 RQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
+Y+A I + + G + L + M G+ ++ T +IL+
Sbjct: 803 VPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILI 845
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 131/289 (45%), Gaps = 19/289 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++++ ++++ AL+ +R+M E G++ + +TY ++ + K + + EM
Sbjct: 595 TYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEM 654
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ K + D +Y I+ + + D+E + E+ P+ V+ Y S Y
Sbjct: 655 RNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVI----YNSLISGYRN 710
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
N ++ A ++ K+ D Y LI L + ++ DL + I D
Sbjct: 711 LNNMEAALNLQKRMLGEGISCDLQTYTTLID---GLLKEGRLVLALDLYSEMSAKGIIPD 767
Query: 310 ---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y ++ L G+ E A+K+L E E + + I NA+I G+ G +Q A +
Sbjct: 768 IIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHN 827
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSV-YVEGKGWK 414
++++KG ++ ++ GK + G +K+ LS+ + +GKG K
Sbjct: 828 EMLDKGLTPNDTTYDILI-----NGKIKGGNSALKSLLSLKFKDGKGMK 871
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 111/287 (38%), Gaps = 11/287 (3%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
L+ Y +Q + AL F KM E G + + +TY ++ K G K D+ T+MK K
Sbjct: 354 TLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNK 413
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
NI P F I + E + E + + + TY S + K + +
Sbjct: 414 NICPTVFIVNSLIRGFLKVESREEASKLFDEAVACD--IANIFTYNSLLSWLCKEGKMSE 471
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITML 314
A+ + +K ++ + YN +I + GN ++ D+ K + Y ++
Sbjct: 472 ATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNV-ITYSILM 530
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
+ K G+ E A V N I G C G A+ +L+ VEKG
Sbjct: 531 DGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFV 590
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
++ + G+ G + +AL+ Y E P VIT
Sbjct: 591 PVCLTYNSIMDGFIKEGS-------VSSALTAYREMCESGVSPNVIT 630
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 3/163 (1%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I K AL++ + M KG+ + +D + +A FS L D
Sbjct: 634 LINGFCKNNNTDLALKMRNEMRNKGL-ELDIAAYGALIDGFCKKQDIETASWLFSELLDG 692
Query: 128 EKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+ + Y +L++ Y + AL+ ++M GI+ TY ++ K G+
Sbjct: 693 GLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLA 752
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
D+ +EM AK I PD Y + IN + LE + IL EME
Sbjct: 753 LDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEME 795
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 155/353 (43%), Gaps = 17/353 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGI---ALSTLTYNDIMCLYSKTG-QYEKVPDV 188
TYG + R+ ++A+ FR+M+E G+ A++ TY + +C + ++ YE
Sbjct: 229 TYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYE----A 284
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
L ++A N D F+Y I + + L+ E + +M ++ I D Y + H Y
Sbjct: 285 LRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEG-IAPDGYIYGALIHAYC 343
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
KA + +A + + + + + ++ +G SEV+ + + +
Sbjct: 344 KAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEV 403
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y +++AL KLG+ EEA ++L E + S D +I GYC G + +A+ + E++
Sbjct: 404 LYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEM 463
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
E+G ++ ++ G+ G + + + + +G KP+ I+ L
Sbjct: 464 KERGIEPDIVTYNILVGGFSRNGLKKEALELLDC-----IGTQGLKPNSATHNRIIEGLC 518
Query: 429 DEGSVQDVEAFVAALRTVIPMN-RQMYHAFIKANIRNGKGVDELLDSMKADGI 480
G V++ EAF+ L N M + KAN + EL + GI
Sbjct: 519 MAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFT--RKAYELFSRLSKQGI 569
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 158/367 (43%), Gaps = 25/367 (6%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
YGAL++ Y + +A++ M GI + + + I+ + G +V D E +
Sbjct: 335 YGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFR 394
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS-AAHFYIKANL 252
IF D Y I +++ +E +L EM+ + + LD Y + A + ++ L
Sbjct: 395 DSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGR-RMSLDVVHYTTLIAGYCLQGKL 453
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+D A ++ ++ +ER + D + YN L+ ++ G K E L L D T + + +
Sbjct: 454 VD-AKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNR 512
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN--AVIIGYCNNGLVQNAEAILEDLVE 370
++E L G+ +EAE L E D + N A++ GYC + A + L +
Sbjct: 513 IIEGLCMAGKVKEAEAFLNTLE------DKCLENYSAMVDGYCKANFTRKAYELFSRLSK 566
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+G S + + G+ ++ ++ L++ VE P+ + ++ +
Sbjct: 567 QGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVE-----PNQIMYGKLIGAFCRD 621
Query: 431 GSVQDVEAFVAAL--RTVIP---MNRQMYHAFIKAN-IRNGKGVDELLDSMKADGIDEDE 484
G ++ + L R + P M + + + N +R + ++ + MK GI D
Sbjct: 622 GDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREAR---DIFNDMKERGIKPDV 678
Query: 485 ETKEILV 491
T +++
Sbjct: 679 ITYTVVL 685
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 22/187 (11%)
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
D E YG L+ + R +A F + E GI +TY ++ Y + +
Sbjct: 603 DVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREA 662
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYG------AR-------SDLEGMEII-----LREM 227
D+ +MK + I PD +Y + ++ + AR S+ E M+ ++EM
Sbjct: 663 RDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEM 722
Query: 228 ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN 287
+P +V Y + K N + A ++ + R Q D + Y L+S S G+
Sbjct: 723 GIKPDVV----CYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGD 778
Query: 288 KSEVLRL 294
+ L
Sbjct: 779 MDRAITL 785
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 165/401 (41%), Gaps = 52/401 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ + + + +AL+ F +MK+ G+ S TYN ++ Y K G ++ + +EM
Sbjct: 403 TYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEM 462
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS-------------- 238
+ P+ +Y + Y A+ D + +L EM+ D++
Sbjct: 463 PMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRV 522
Query: 239 --------------------TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
TY S + ++KA ++ A V ++ E+ + I Y
Sbjct: 523 CEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSF 582
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWEL 335
I Y G L++ + + +R + D Y ++ + G A ++L
Sbjct: 583 IDGYCRTGCSDMALKMLNDVR---RRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLK 639
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G + +T + N++I GY N +++ E +++ G +++ + G+ G
Sbjct: 640 DGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGN--- 696
Query: 396 GFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQ 452
+ AL +Y E KG+ PD T++ L G + + + +R + + N
Sbjct: 697 ----VAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVF 752
Query: 453 MYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
+Y+ I +R+ K + L D M GI D+ T +ILV
Sbjct: 753 IYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 133/302 (44%), Gaps = 24/302 (7%)
Query: 92 GICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKAL 151
GIC+ D ++D G + F+S E + T TY +++N +V+ A
Sbjct: 515 GICMV---DRVCEVD--GMLKSFMS-EGFIP-------TMMTYNSIINGFVKAGMMGSAF 561
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
+ +++M+E G+ + +TY + Y +TG + +L +++ + + PD +Y IN +
Sbjct: 562 TVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGF 621
Query: 212 ---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
G S + +IL + P+ V+ Y S Y N++ + S + +
Sbjct: 622 CQEGNMSHALQLLVILLKDGLAPNTVV----YNSLITGYKNLNMMKEVSKFYESMIKGGI 677
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR--DYITMLEALMKLGEHEEA 326
D Y LI ++ GN + L L+ + K YI + + L + G+ + A
Sbjct: 678 VADTSTYTTLIDGFSKDGNVAFALELY--SEMMAKGYIPDAFTFTALTHGLCRSGDIDGA 735
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
+K+L+E + I N +I GY + +Q A + ++++ G ++ ++ +
Sbjct: 736 KKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSK 795
Query: 387 YF 388
F
Sbjct: 796 KF 797
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 5/153 (3%)
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
Y I+ LG+ LR+ K + Y TM++ L+K G EEA +V E
Sbjct: 230 YALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMR 289
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
+G D + ++ GYC V NA + ++ ++ G T + V+ G G T+
Sbjct: 290 DAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQ 349
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ ++ L + G+G P ++ +L L
Sbjct: 350 KAYE-----LCRQMTGQGLLPSTFELSLVLKGL 377
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 131/338 (38%), Gaps = 16/338 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ V+ + ++AL +M++ G + + +M Y + ++ E
Sbjct: 264 TYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKET 323
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
I P Y + I + + R+M Q L ST+ + +K L
Sbjct: 324 LKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQG---LLPSTFELS--LVLKGLL 378
Query: 253 IDKA-SDVLKKAEERLEQ--KDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINR 308
D+ D + EE + D YN LI + E L L+D ++K K IN
Sbjct: 379 NDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINT 438
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++L K G +EA K+ E + G + ++ GY NA A+L+++
Sbjct: 439 -YNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEM 497
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
+ G + ++ V+ G + +K+ +S +G+ P SI++
Sbjct: 498 KQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMS-----EGFIPTMMTYNSIINGFV 552
Query: 429 DEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNG 465
G + +R +P N Y +FI R G
Sbjct: 553 KAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTG 590
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 173/419 (41%), Gaps = 67/419 (15%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLK 125
++ L K+ RF +V M +G +P + +D R FL A F +
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGA---SPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220
Query: 126 DDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ + T Y L+ + + +A S FR M+ G+ + TYN +M Y K +
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
K ++ EM + P+ ++ I I+ ++D EM S ++D +++
Sbjct: 281 KALELYXEMLGDGLLPNVVTFGILIDGL-CKTD---------EMVSARKFLIDMASFGVV 330
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTAC 302
+ ++ YN LI Y GN SE L L ++EK
Sbjct: 331 PNIFV--------------------------YNCLIDGYCKAGNLSEALSLHSEIEKHEI 364
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+ Y +++ L + EEA+ +L+E + G + N +I GYC G ++ A
Sbjct: 365 LPDV-FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG--KGWKPDPKVI 420
+ + EKG +++ + GY AGK M+AA+ +Y E KG PD
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGK-------MEAAMGLYTEMVIKGLLPDVVAY 476
Query: 421 TSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADG 479
T+++ +G+ + EAF ++++M A + N+ + L+D + DG
Sbjct: 477 TALIDGHFKDGNTK--EAF--------RLHKEMQEAGLHPNVFT---LSCLIDGLCKDG 522
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 110/274 (40%), Gaps = 20/274 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y L++ Y + +ALS ++++ I TY+ ++ + E+ +L EM
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394
Query: 193 KAKNIFPDNFSYRICINSYGARSDLE-GMEII--LREMESQPHIVLDWSTYASAAHFYIK 249
K K P+ +Y I+ Y ++E +E+ + E +P+I+ T+++ Y K
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNII----TFSTLIDGYCK 450
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A ++ A + + + D + Y LI + GN E RL + A
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFT 510
Query: 310 YITMLEALMKLGEHEEAEKVL-------------KEWELSGNSYDTRIPNAVIIGYCNNG 356
+++ L K G +A K+ E + S S + + A+I G C +G
Sbjct: 511 LSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDG 570
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+ A D+ G + V+ G+F A
Sbjct: 571 RIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRA 604
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 137/308 (44%), Gaps = 16/308 (5%)
Query: 178 KTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES-QPHIVLD 236
K+ +Y++ L M + PD +C +++ +E ++ ME + H D
Sbjct: 89 KSAKYDESLYFLQHMVNRGYKPDVI---LCTKLIKGFFNMKKIEKAIQVMEILEKHGKPD 145
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
Y + + KA+ +D AS VL + ++R + D + YN LI + G LR+ D
Sbjct: 146 VFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMD 205
Query: 297 -LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
L K CK + Y ++EA + G +EA K+L E G D N V+ G C
Sbjct: 206 QLLKDNCKPTV-ITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKE 264
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
G++ A L + + G +++ ++ + GK E G + M L KG +P
Sbjct: 265 GMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLV-----KGCEP 319
Query: 416 DPKVITSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGKGVD---EL 471
+P +++++ L +G + + + + ++ + + Y I A R GK VD E
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGK-VDLAIEF 378
Query: 472 LDSMKADG 479
LD M + G
Sbjct: 379 LDDMISGG 386
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 149/391 (38%), Gaps = 58/391 (14%)
Query: 121 FSNLKDDEKTYQT--------------YGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
F N+K EK Q Y A+++ + + + D A +MK+ G
Sbjct: 122 FFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDV 181
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
+TYN ++ + G+ + V+ ++ N P +Y I I + + ++ +L E
Sbjct: 182 VTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDE 241
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
M S+ + D TY + K ++D+A + L +
Sbjct: 242 MLSR-GLRPDRYTYNVVVNGMCKEGMLDRAFEFLSR------------------------ 276
Query: 287 NKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
+ K C ++ Y +L L+ G+ E EK++ + + G + +
Sbjct: 277 ----------ISKNGCVAGVST-YNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYS 325
Query: 347 AVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSV 406
+I C +G + A+ +L+ + EK A S+ + + GK + + + +S
Sbjct: 326 TLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMIS- 384
Query: 407 YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG 465
G PD SIL+ L G+ + L V P N Y+ A +G
Sbjct: 385 ----GGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSG 440
Query: 466 KGVDEL--LDSMKADGIDEDEETKEILVCTM 494
+ L + M ++GID DE T L+ +
Sbjct: 441 DKIRALGMILEMLSNGIDPDEITYNSLISCL 471
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 122/301 (40%), Gaps = 9/301 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++N ++ D+A ++ + G TYN ++ G++E ++++M
Sbjct: 253 TYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDM 312
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K P+ +Y I + ++ + +L+ M+ + + D +Y +
Sbjct: 313 LVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKA-LAPDGYSYDPLISALCREGK 371
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYI 311
+D A + L D + YN +++ GN E L +++ L + C Y
Sbjct: 372 VDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAG-SYN 430
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T+ AL G+ A ++ E +G D N++I C +GLV A +L D+ E
Sbjct: 431 TLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFES 490
Query: 372 GKA-TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
K T S+ V G + + + A ++ +G P+ T ++ +G
Sbjct: 491 EKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVN-----EGCLPNETTYTLLIQGIGFA 545
Query: 431 G 431
G
Sbjct: 546 G 546
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 171/409 (41%), Gaps = 37/409 (9%)
Query: 107 LIGRVHGFLSAESYFSNLK--DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIAL 164
LIG G E F +K D + TY LL ++R ++KA + +++ G L
Sbjct: 199 LIGIFGGGADVERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKL 258
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIIL 224
YN ++ +K + ++V V +MK K+ PD ++Y I I G + +
Sbjct: 259 DIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLF 318
Query: 225 REMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK--DGIGYNFLI 279
+EM + P+++ Y + ++DK + K + K + Y +L+
Sbjct: 319 QEMTEKGYTPNLI----AYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLV 374
Query: 280 SLYASLGNKSEVLRL----WDLEKTACKRYINRD-YITMLEALMKLGEHEEAEKVLKEWE 334
+ LG+ SE RL W +RD Y++MLE+L G+ EA +L +
Sbjct: 375 RTLSKLGHASEAHRLFCNMWSFHDEG-----DRDAYMSMLESLCDAGKTTEALDLLSKIH 429
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN----SWAVVAAGYFDA 390
S DT + N V+ L + ++ L DL EK K P+ S+ ++ + + A
Sbjct: 430 EKRISTDTVMYNTVLSAL--GKLKKTSD--LHDLYEKMKQDGPSPDIFSYNILISSFGRA 485
Query: 391 GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPM 449
G+ E + + +E KPD S+++ LG G + + +R +
Sbjct: 486 GRVEEAVKIFEE-----LENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSP 540
Query: 450 NRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETKEILVCTMEK 496
+ Y I+ + K L D M A+G + T IL+ +E+
Sbjct: 541 DVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLER 589
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 9/220 (4%)
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
DE Y ++L +T +AL K+ E I+ T+ YN ++ K + +
Sbjct: 398 DEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLH 457
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASA 243
D+ +MK PD FSY I I+S+G +E I E+E+ +P I+ ++ S
Sbjct: 458 DLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDII----SFNSL 513
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTAC 302
+ K ID+A K+ E D + Y+ LI + RL+D + C
Sbjct: 514 INCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGC 573
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
I Y +L+ L + G EA + + + G + D+
Sbjct: 574 SPNI-VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDS 612
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 40/74 (54%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ C+ + + + A F +M G + + +TYN ++ ++G+ + D+ ++
Sbjct: 544 TYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKL 603
Query: 193 KAKNIFPDNFSYRI 206
K + + PD+ +Y +
Sbjct: 604 KQQGLTPDSITYAV 617
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 162/405 (40%), Gaps = 53/405 (13%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY L+NCY R R+ D L F ++ G+ +YN ++ +SK G+ +K D+
Sbjct: 188 TIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLF 247
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---------------------- 227
+M+ + I P+ +Y IN +++ E +LR+M
Sbjct: 248 YKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTS 307
Query: 228 ------------ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
S +V D S K I +A D+ + + D I Y
Sbjct: 308 GMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISY 367
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI--TMLEALMKLGEHEEAEKVLKEW 333
L+ YA+ G + + L+++ C+ + ++ T++ A +LG +++ + ++
Sbjct: 368 GALLHGYATAGCIAGMDNLFNV--MVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 425
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
G + D + VI +C G + +A +++ G ++ + G +
Sbjct: 426 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDL 485
Query: 394 ERGFQCMKAALSVYVEGKGWKPDP-KVITSILSKLGDEGSVQ------DVEAFVAALRTV 446
+ + + LS KG P K TSI++ L EG V D+ +
Sbjct: 486 VKAKELISDMLS-----KGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNL 540
Query: 447 IPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
I N + + N++ G LLDSM++ G++ D T LV
Sbjct: 541 ITFNSLVDGYCLVGNMKEAVG---LLDSMESVGVEPDIYTYNTLV 582
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 6/248 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +L++ Y +A+ M+ +G+ TYN ++ Y K G+ + + +M
Sbjct: 542 TFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 601
Query: 193 KAKNIFPDNFSYRICINS-YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K + + SY I ++ + AR + E+ +ES + + TYA+ + N
Sbjct: 602 LHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG--MAVSIHTYATVLGGLCRNN 659
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
D+A+ +L+K + D + +N +I +G + E L+ T Y
Sbjct: 660 CTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYR 719
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
M+ L+K E+A+ + E S + D+RI N +I N G V A L + +K
Sbjct: 720 VMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKK 779
Query: 372 G---KATT 376
G +ATT
Sbjct: 780 GILPEATT 787
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 159/430 (36%), Gaps = 65/430 (15%)
Query: 62 VGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSA---- 117
VG + L K R +A ++ D M KG P + + +HG+ +A
Sbjct: 329 VGNCNSFMTALCKHGRIKEARDIFDSMVLKG-----PKPDVISYGAL--LHGYATAGCIA 381
Query: 118 --ESYFS-----NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYN 170
++ F+ + D + T L+N Y R DK+L F M + G+ +T++
Sbjct: 382 GMDNLFNVMVCEGVVPDRHVFNT---LINAYARLGMMDKSLLMFEDMTKQGVNPDIITFS 438
Query: 171 DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
++ + + G+ + + M + PD Y I R DL + ++ +M S+
Sbjct: 439 TVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSK 498
Query: 231 --PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
P + + + S + K + + DV+ ++ + I +N L+ Y +GN
Sbjct: 499 GIPPPCIKF--FTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNM 556
Query: 289 SEVLRLWD----------------LEKTACKR-------YINRD------------YITM 313
E + L D L CK + RD Y +
Sbjct: 557 KEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNII 616
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
L L + A+++ E SG + V+ G C N A +LE L
Sbjct: 617 LHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNV 676
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
++ +V F G+ + + + AA+S Y G P +++ L E S
Sbjct: 677 KFDILTFNIVIRAMFKVGRRQEAKE-LFAAISTY----GLVPTILTYRVMITNLIKEESF 731
Query: 434 QDVEAFVAAL 443
+D + +++
Sbjct: 732 EDADNLFSSM 741
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 1/165 (0%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ TY +L R TD+A K+ M + LT+N ++ K G+ ++ ++
Sbjct: 644 SIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELF 703
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ + P +YR+ I + E + + ME + D +
Sbjct: 704 AAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME-KSSCTPDSRILNEIIRMLLN 762
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
+ KA + L K +++ + + LI L++ G E ++L
Sbjct: 763 KGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKL 807
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 156/384 (40%), Gaps = 17/384 (4%)
Query: 111 VHGFLSAE------SYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+HGF A FS + +D T +TY ++ + + +AL+ F++M E
Sbjct: 281 IHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHC 340
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+ TY ++C + ++ +L M K + P +Y I+ Y +
Sbjct: 341 QPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALE 400
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
IL MES + + TY + + I KA +L K ER Q + + YN LI
Sbjct: 401 ILSLMESN-NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQ 459
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
G+ +L L + Y ++ L K G EEA + + + G +
Sbjct: 460 CKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANE 519
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA 402
I + +I GYC G V + +L+ ++ G PNS + D E+ F+ +
Sbjct: 520 VIYSTLIDGYCKVGKVSDGRFLLDKMLSAG--CVPNS--ITYNSLIDGYCKEKNFKEARL 575
Query: 403 ALSVYVEGKGWKPDPKVITSILSK-LGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKAN 461
+ + ++ + +P T ++ L D+ Q + F L T + +Y AFI A
Sbjct: 576 LVDIMIK-RDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAY 634
Query: 462 IRNG--KGVDELLDSMKADGIDED 483
+G K + L+ M A GI D
Sbjct: 635 CSHGRLKDAEVLICKMNAKGIMPD 658
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 115/277 (41%), Gaps = 15/277 (5%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY L+ + R + KA+S KM E + + +TYN ++ K G +L+
Sbjct: 415 RTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSL 474
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M + PD ++Y + I++ R +E + ++ + I + Y++ Y K
Sbjct: 475 MNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKG-IKANEVIYSTLIDGYCKVG 533
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-- 309
+ +L K + I YN LI Y N E L D+ I RD
Sbjct: 534 KVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDI-------MIKRDIE 586
Query: 310 -----YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y +++ L+K E ++A + + +G+ D I A I YC++G +++AE +
Sbjct: 587 PAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVL 646
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+ + KG + + Y G + F +K
Sbjct: 647 ICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILK 683
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 108/276 (39%), Gaps = 15/276 (5%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
+D E TY L++ ++ + D+A F +M G Y + Y G+ +
Sbjct: 583 RDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKD 642
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
++ +M AK I PD Y + I++YG ++G IL+ M
Sbjct: 643 AEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHE----------VGCEP 692
Query: 245 HFYIKANLIDKASDVLKK----AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
+Y + LI S+ K + E + G+ N + + + + + + +
Sbjct: 693 SYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEH 752
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
C N Y + L K+G E A ++ + G S + I N+++ C GL
Sbjct: 753 GCAPNANT-YGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGE 811
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
A L+ ++E +S ++ G +D G E+
Sbjct: 812 AIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKA 847
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 154/370 (41%), Gaps = 19/370 (5%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T + Y LL R D+ S + +M + + + T N ++ Y K G + +
Sbjct: 168 TLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYV 227
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+++ + D F+Y I Y +++ I M ++ + + +Y + H + +
Sbjct: 228 SKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG-CLRNEVSYTNLIHGFCE 286
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINR 308
A +D+A + + E Y +I LG K+E L ++ ++ + C+ ++
Sbjct: 287 ARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHT 346
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ +L + ++A+K+L G NA+I GYC GL +A IL +
Sbjct: 347 -YTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT-SIL--- 424
+ ++ + G F GK + A+S+ + K P V+T +IL
Sbjct: 406 ESNNCSPNARTYNELILG-FCRGKN------IHKAMSLLHKMLERKLQPNVVTYNILIHG 458
Query: 425 -SKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGID 481
K GD GS + + + ++P + Y FI + G + L +S+K GI
Sbjct: 459 QCKEGDLGSAYKLLSLMNE-SGLVP-DEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIK 516
Query: 482 EDEETKEILV 491
+E L+
Sbjct: 517 ANEVIYSTLI 526
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 140/314 (44%), Gaps = 15/314 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y AL+ Y Q + D AL + +M E G+A++ TYN ++ G+ + +++ EM
Sbjct: 260 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 319
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
K + D F+Y I IN + +++ I M S+ + TY S + K +
Sbjct: 320 GKGLALDVFTYNILINGHCKEGNVKKALEIFENM-SRRGVRATVVTYTSLIYALSKKGQV 378
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRD--Y 310
+ + +A R + D + YN LI+ +++ GN + ++EK KR D Y
Sbjct: 379 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK---KRIAPDDVTY 435
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T++ L LG +EA K++ E G D N +I GY G V++A I +++
Sbjct: 436 NTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 495
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG-- 428
KG T ++ + G G+ + +K + G PD S++ L
Sbjct: 496 KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE-----NGITPDDSTYISLIEGLTTE 550
Query: 429 DEGSVQDVEAFVAA 442
DE ++ D E AA
Sbjct: 551 DERAIDD-ERLAAA 563
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 1/209 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N + ++ KAL F M G+ + +TY ++ SK GQ ++ + E
Sbjct: 329 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA 388
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ I PD Y INS+ +++ I+ EME + I D TY +
Sbjct: 389 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK-RIAPDDVTYNTLMRGLCLLGR 447
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+D+A ++ + +R Q D + YN LIS Y+ G+ + LR+ + Y
Sbjct: 448 VDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 507
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+++ L K G+ ++AE ++KE +G + D
Sbjct: 508 LIQGLCKNGQGDDAENMVKEMVENGITPD 536
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 142/347 (40%), Gaps = 15/347 (4%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A + F M + + L T T+N ++ G+ + ++L +M P+ +Y I
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 193
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
+ +R ++ I+REM + I + TY + + K +D+A V + + E
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253
Query: 270 K-DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
K + + YN LI Y G L D Y ++ AL G EA +
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+++E G + D N +I G+C G V+ A I E++ +G T ++ +
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVI 447
G+ + + A+ +G +PD + ++++ G++ + + + I
Sbjct: 374 KKGQVQETDKLFDEAVR-----RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 428
Query: 448 PMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETKEILV 491
+ Y+ ++ G+ VDE L+D M GI D T L+
Sbjct: 429 APDDVTYNTLMRGLCLLGR-VDEARKLIDEMTKRGIQPDLVTYNTLI 474
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 128/294 (43%), Gaps = 8/294 (2%)
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
+KAL +M+ +GI + +TYN ++ Y + E ++++EM K PD SY
Sbjct: 170 EKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTV 229
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
+ + + ++ +ME ++ D TY + H K D+A L++A++R
Sbjct: 230 MGFLCKNRRIREVMDVIEKMED-TKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRG 288
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEA 326
Q D +GY+ ++ Y G + + ++ C + Y ++ + GE +A
Sbjct: 289 FQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVV-TYTAIINGFSQAGEVGQA 347
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
K+L++ G +T A + G C G A +++ E+ +++VV G
Sbjct: 348 RKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHG 407
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
+ GK ++ + GKG+ P P I +L L G V + + F+
Sbjct: 408 FRREGKLSDACDVVREMI-----GKGFFPTPVEINLLLQSLCRIGRVDEAKKFM 456
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 140/317 (44%), Gaps = 32/317 (10%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ + + D+AL R+ ++ G + + Y+ I+ Y K G+ ++ +++ EM
Sbjct: 260 TYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEM 319
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+ PD +Y IN + ++ +L++M +P+ V +Y + +
Sbjct: 320 FTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTV----SYTAFLKGLCQ 375
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC---KRYI 306
+A +++K +EE+ + I Y+ ++ + G S+ AC + I
Sbjct: 376 KGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSD----------ACDVVREMI 425
Query: 307 NRDYIT-------MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
+ + +L++L ++G +EA+K ++E G + + VI +C ++
Sbjct: 426 GKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIE 485
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
A ++L+D+ K ++ + G+ E + L++ + KG P P
Sbjct: 486 AALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATE-----LTLKMLKKGIDPTPVT 540
Query: 420 ITSILSKLGDEGSVQDV 436
+++ + G G V+D+
Sbjct: 541 YRTVIHRYGQIGRVEDL 557
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 146/356 (41%), Gaps = 17/356 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ Y + + A+ +M G + ++Y +M K + +V DV+ +M
Sbjct: 190 TYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKM 249
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + D +Y I+ + LRE + + V D Y++ Y K
Sbjct: 250 EDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQV-DKVGYSAIVDSYCKEGR 308
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTACKRYINRDYI 311
+D+A +++ + R D + Y +I+ ++ G + + L + K CK Y
Sbjct: 309 MDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPN-TVSYT 367
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
L+ L + G EA +++K E + + + V+ G+ G + +A ++ +++ K
Sbjct: 368 AFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGK 427
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G TP ++ G+ + + M+ L++ G + T+++ + +
Sbjct: 428 GFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNM-----GCAVNAVNFTTVIHRFCQQ- 481
Query: 432 SVQDVEAFVAALRTVIPMNRQ----MYHAFIKANIRNGK--GVDELLDSMKADGID 481
D+EA ++ L + N+ Y I A + G+ EL M GID
Sbjct: 482 --DDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGID 535
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 124/340 (36%), Gaps = 45/340 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +L+ + + A R M GI + + +M YS+ G+ VLT M
Sbjct: 85 VYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMM 144
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVL-------------- 235
+ I P+ I+ + LE L M+ P++V
Sbjct: 145 QKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRV 204
Query: 236 -----------------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
D +Y + F K I + DV++K E+ D + YN L
Sbjct: 205 EDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTL 264
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWEL 335
I + + E L+ + A KR D Y ++++ K G ++A++++ E
Sbjct: 265 IHMLCKHQHADEALQFL---REAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFT 321
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G D A+I G+ G V A +L+ + + G S+ G G +
Sbjct: 322 RGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSE 381
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
+ MKA+ E + W P+ + ++ EG + D
Sbjct: 382 AREMMKAS-----EEQWWTPNAITYSVVMHGFRREGKLSD 416
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 98/232 (42%), Gaps = 9/232 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ + R+ + A R+M G + + N ++ + G+ ++ + E
Sbjct: 400 TYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEEC 459
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME-SQPHIVLDWSTYASAAHFYIKAN 251
+ ++ I+ + + D+E +L +M S H D TY + K
Sbjct: 460 LNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHP--DAVTYTTIIDALGKKG 517
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRD 309
I++A+++ K ++ + Y +I Y +G ++L L D L + C+ N+
Sbjct: 518 RIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRTAFNQ- 576
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
++E L G E A+K+L + + + D + ++ Y G+ +A
Sbjct: 577 ---VIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSA 625
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 172/423 (40%), Gaps = 62/423 (14%)
Query: 78 FSQALEVSDWMNRKGICVFAPCDH--AVQLDLIGR-------VHGFLSAESYFSNLKDDE 128
+ +ALEV +W+N + ++P A L ++G+ V F AE+ N
Sbjct: 200 WQRALEVYEWLNLRHW--YSPNARMLATILSVLGKANQEALAVEIFARAEAAXGN----- 252
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY--EKVP 186
T Q Y A++ Y R + K M+ G +++N ++ K+G
Sbjct: 253 -TVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAI 311
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASA 243
++L E++ I PD +Y I++ S+LE + +M QP D TY +
Sbjct: 312 ELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQP----DLWTYNAM 367
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
Y + + +A + K E + D + YN L+ +A GN +V + + K
Sbjct: 368 ISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICE---DMVK 424
Query: 304 RYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
+D Y T++ K G+H+ A ++ + +LSG S D +I +++
Sbjct: 425 MGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKE 484
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGK---TERGFQCM--------KAALSVYVE 409
A ++ +++ T +++ + GY AGK E F CM A SV ++
Sbjct: 485 AAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLD 544
Query: 410 --------GKG-----------WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMN 450
GK +KPD + +L LG E +DV V + + MN
Sbjct: 545 ILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMN 604
Query: 451 RQM 453
Q+
Sbjct: 605 SQV 607
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 144/373 (38%), Gaps = 48/373 (12%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A + F+ + D T + L+ + + D+ +++++MG +S + ++
Sbjct: 833 ARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLD 892
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
++ G +V + MKA FP YRI I + +E ++ EME
Sbjct: 893 AFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEV-AXFK 951
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
D S + S Y K V + +E + D YN LI +Y E L L
Sbjct: 952 PDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSL 1011
Query: 295 W-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
++ + + ++ Y +++ A KL E+AE++ + D + ++ +
Sbjct: 1012 MHEMRRVGLEPKLD-TYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFR 1070
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
N+G AE +L + E G T + ++ Y +G+
Sbjct: 1071 NSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQ--------------------- 1109
Query: 414 KPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK---GVDE 470
P+ +L L EG +P++ Y + I A ++NG + +
Sbjct: 1110 ---PEEAEKVLDNLKVEG---------------LPLSTLPYSSVIDAYLKNGDHNVAIQK 1151
Query: 471 LLDSMKADGIDED 483
L++ MK DG++ D
Sbjct: 1152 LME-MKKDGLEPD 1163
>gi|302804248|ref|XP_002983876.1| hypothetical protein SELMODRAFT_423148 [Selaginella moellendorffii]
gi|300148228|gb|EFJ14888.1| hypothetical protein SELMODRAFT_423148 [Selaginella moellendorffii]
Length = 414
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 165/376 (43%), Gaps = 30/376 (7%)
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
AL++ R D+A + KE G Y+ ++ K G +++ V++EM
Sbjct: 46 AALISFCHRVEDLDEARQLLARSKEQGAKPEFSCYHTLLDGCCKFGSPDELLAVISEMDE 105
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
PD +Y I SY S L+ I + + + + ++ S Y+S Y +A+
Sbjct: 106 CGTPPDARAYAFLIASYAKASMLDKASEIFQTLR-RKNAGIESSVYSSLVWLYCQADRPK 164
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRD-YIT 312
A + LK EE + +D I YN +IS Y +G S+ R++ D++K K + R Y
Sbjct: 165 DAEEFLKAMEEDRKDEDCISYNVVISAYQRMGCYSDATRIFQDMKKKKKKETLGRSTYKL 224
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
ML+ +K +H+ +K+ KE S S + A + Y + V++AE + E+L G
Sbjct: 225 MLDVYLKASDHDSFDKLFKEMLGSKVSGEASTLEAAVNLYASRDSVKDAEWLYENLAPSG 284
Query: 373 KATTPNSWAVVAAGYFDAGKT---ERGFQCM-----------KAALSVYVEGKGWKPDPK 418
T + + + AG T +R ++ M + ++ ++ + ++ +
Sbjct: 285 SRLTVLGYNKLLELFLAAGNTAMVDRIYREMPRVVSPDQTTRRLVMTAFLRAQSFRGAVE 344
Query: 419 VITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKAD 478
+ IL + G + D ++F +R + M R F +A +L+ M+
Sbjct: 345 LHEEILRESGGVQPLLDPQSFALLVRAYVKMER-----FFEAM--------KLVVLMRKA 391
Query: 479 GIDEDEETKEILVCTM 494
G+ DEE E +V M
Sbjct: 392 GMKVDEEIYEKVVTGM 407
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 139/365 (38%), Gaps = 66/365 (18%)
Query: 92 GICVFAPCDHAV----QLDLIG-----RVHGFLSAE-SYFSNLKDDEKTYQT-------- 133
G C F D + ++D G R + FL A + S L + +QT
Sbjct: 86 GCCKFGSPDELLAVISEMDECGTPPDARAYAFLIASYAKASMLDKASEIFQTLRRKNAGI 145
Query: 134 ----YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
Y +L+ Y + + A + M+E ++YN ++ Y + G Y +
Sbjct: 146 ESSVYSSLVWLYCQADRPKDAEEFLKAMEEDRKDEDCISYNVVISAYQRMGCYSDATRIF 205
Query: 190 TEMKAKNIFPD--NFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
+MK K +Y++ ++ Y SD + + + +EM + + ST +A + Y
Sbjct: 206 QDMKKKKKKETLGRSTYKLMLDVYLKASDHDSFDKLFKEMLGS-KVSGEASTLEAAVNLY 264
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
+ + A + + + +GYN L+ L+ + GN + V R++ R ++
Sbjct: 265 ASRDSVKDAEWLYENLAPSGSRLTVLGYNKLLELFLAAGNTAMVDRIY----REMPRVVS 320
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
D T +++ L S+ G V+ E IL +
Sbjct: 321 PDQTT--------------RRLVMTAFLRAQSF--------------RGAVELHEEILRE 352
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD----PKVITSI 423
P S+A++ Y K ER F+ MK L V + G K D KV+T +
Sbjct: 353 SGGVQPLLDPQSFALLVRAYV---KMERFFEAMK--LVVLMRKAGMKVDEEIYEKVVTGM 407
Query: 424 LSKLG 428
+S G
Sbjct: 408 VSVQG 412
>gi|299469706|emb|CBN76560.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 915
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 148/337 (43%), Gaps = 22/337 (6%)
Query: 69 IRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE 128
+ D + + +ALE+ M R+G + C +A + R H SA +++++D
Sbjct: 334 VADPKPTRAHEKALELIQEMRREGPSPNSQC-YASAITACARAHDPRSAMRLLADMRED- 391
Query: 129 KTYQTYGALLNCYV----RQRQTDKALSHFRKM-KEMGIALSTLTYNDIMCLYSKTGQYE 183
+LN V + D+AL R M K G+ +T+T+N + S+ G+
Sbjct: 392 -GVPPNDVVLNAAVDACGKGDAPDEALKLLRGMEKAYGVKPNTVTFNSAISGLSRAGRAR 450
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+ +L EM + + PDNFS+ + + A D + EM+S+ I +D +Y +A
Sbjct: 451 EAKALLNEMSERGLKPDNFSFNAAMQGFAAAGDPRNTASLSDEMKSR-GIGMDVVSYGTA 509
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
KA + A +LK+ +E + + + YN + G +L L K +
Sbjct: 510 VSACAKAGDVKGALKLLKEMQEAGVEPNTVVYNSALDACGRAGKPKVAEKL--LRKMG-E 566
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC-----NNGLV 358
+ RD + A++ + + +K L EW L S + P A+ Y +G
Sbjct: 567 TGVVRDATSYTGAIVACSRNGDGDKAL-EW-LETMSKEGIAPEAITYNYAMAACGRSGND 624
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
+ AE +L ++ +G+ TPN + AA F GK R
Sbjct: 625 RQAEWLLNEM--RGQGVTPNRISYSAA-MFALGKAGR 658
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 16/150 (10%)
Query: 105 LDLIGRVHGFLSAESYFSNLKD-----DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
LD GR AE + + D +Y GA++ C R DKAL M +
Sbjct: 545 LDACGRAGKPKVAEKLLRKMGETGVVRDATSY--TGAIVACS-RNGDGDKALEWLETMSK 601
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
GIA +TYN M ++G + +L EM+ + + P+ SY + + G L
Sbjct: 602 EGIAPEAITYNYAMAACGRSGNDRQAEWLLNEMRGQGVTPNRISYSAAMFALGKAGRLPD 661
Query: 220 MEIILREMESQP--------HIVLDWSTYA 241
+ +L EM + HI +D ++ A
Sbjct: 662 VLSLLEEMHREGVEADEVTYHIAVDAASIA 691
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 71/184 (38%), Gaps = 28/184 (15%)
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ + + L + G EA+ +L E G D NA + G+ G +N ++ +++
Sbjct: 436 FNSAISGLSRAGRAREAKALLNEMSERGLKPDNFSFNAAMQGFAAAGDPRNTASLSDEMK 495
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK-----------GWKPDPK 418
+G S+ + AG + + +K VE G PK
Sbjct: 496 SRGIGMDVVSYGTAVSACAKAGDVKGALKLLKEMQEAGVEPNTVVYNSALDACGRAGKPK 555
Query: 419 VITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDEL--LDSMK 476
V +L K+G+ G V+D ++ A I A RNG G L L++M
Sbjct: 556 VAEKLLRKMGETGVVRDATSYTGA---------------IVACSRNGDGDKALEWLETMS 600
Query: 477 ADGI 480
+GI
Sbjct: 601 KEGI 604
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 147/342 (42%), Gaps = 10/342 (2%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y AL++ +++ Q + A +MK G +TYN ++ + G+ + ++ E+
Sbjct: 141 YNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELL 200
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
N P +Y I I + ++ +L EM S+ + D TY + K ++
Sbjct: 201 KDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSK-GLEPDTLTYNAIIRGMCKEMMV 259
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYIT 312
DKA ++L+ R + D I YN L+ S G SE +L ++ CK + I
Sbjct: 260 DKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSI- 318
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ L + G+ EEA +L+ + G D + +I G+C G + A LE ++ G
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
++ + AG GK ++ + + V G P+ ++ S L G
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEV-----GCPPNVSSYNTLFSALWSSGD 433
Query: 433 -VQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLD 473
+ +E + L I + Y++ I R+G VDE ++
Sbjct: 434 RYRALEMILKLLNQGIDPDEITYNSLISCLCRDGM-VDEAIE 474
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
D Y + +IKAN ++ A+ VL + + R D + YN +I + S G L ++
Sbjct: 137 DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIF 196
Query: 296 D-LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
+ L K C+ + Y ++EA + G + A K+L E G DT NA+I G C
Sbjct: 197 EELLKDNCEPTV-ITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCK 255
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
+V A +L L +G ++ ++ GK G + + +S+ G K
Sbjct: 256 EMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISI-----GCK 310
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDEL 471
P+ + ++ L +G V++ + +++ + + Y I R G+ E
Sbjct: 311 PNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEF 370
Query: 472 LDSMKADGIDED 483
L+ M +DG D
Sbjct: 371 LEYMISDGCLPD 382
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 151/384 (39%), Gaps = 51/384 (13%)
Query: 115 LSAESYFSNLKDD-EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
L+ E + LKD+ E T TY L+ + D A+ +M G+ TLTYN I+
Sbjct: 191 LALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAII 250
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---Q 230
K +K ++L + ++ PD +Y I + + +R E ++ EM S +
Sbjct: 251 RGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCK 310
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
P++V T++ + +++A ++L+ +E+ + D Y+ LI+ +
Sbjct: 311 PNVV----THSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGF-------- 358
Query: 291 VLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
C+ G + A + L+ G D N ++
Sbjct: 359 -----------CRE----------------GRLDLATEFLEYMISDGCLPDIVNYNTIMA 391
Query: 351 GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG 410
G C G A + E L E G +S+ + + + +G R + + L+
Sbjct: 392 GLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLN----- 446
Query: 411 KGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD 469
+G PD S++S L +G V + +E V N Y+ + + + D
Sbjct: 447 QGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRAND 506
Query: 470 --ELLDSMKADGIDEDEETKEILV 491
E+L +M G +E T +L+
Sbjct: 507 AIEVLAAMTEKGCQPNETTYILLI 530
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 114/260 (43%), Gaps = 13/260 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LL + + + + +M +G + +T++ ++ + G+ E+ ++L M
Sbjct: 280 TYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSM 339
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
K K + PD + Y I + L+ L M S P IV +++T + K
Sbjct: 340 KEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIV-NYNTIMAGLCRTGK 398
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A D+A +V +K +E + YN +L+++L + + R ++ + I+ D
Sbjct: 399 A---DQALEVFEKLDEVGCPPNVSSYN---TLFSALWSSGDRYRALEMILKLLNQGIDPD 452
Query: 310 YIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
IT ++ L + G +EA ++L + + + N +++G C +A +L
Sbjct: 453 EITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLA 512
Query: 367 DLVEKGKATTPNSWAVVAAG 386
+ EKG ++ ++ G
Sbjct: 513 AMTEKGCQPNETTYILLIEG 532
>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 903
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 141/356 (39%), Gaps = 59/356 (16%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T +L+N Y + R M E G++ + +T+ ++ Y K G E+ V +
Sbjct: 263 TCNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELV 322
Query: 193 KAKNIFPDNFSY-----------RIC------------------------INSYGARSDL 217
K + PD + RIC IN Y L
Sbjct: 323 TEKKLVPDQHMHGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQL 382
Query: 218 EGMEIILREMESQPHIVLDWS------TYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
E IL M DWS TY + Y +A +D+A + + ++
Sbjct: 383 VEAEQILTRMN-------DWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPT 435
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEK 328
+ YN L+ Y+ +G +VL LW K KR + + I T+LEAL KLG+ +EA K
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLW---KMMLKRGVTANEISCSTLLEALFKLGDFDEAMK 492
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ + G DT N +I G C V A+ IL+++ ++ ++ GY+
Sbjct: 493 LWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYY 552
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
+ G + F A+ ++E KG P ++ +++S + V V LR
Sbjct: 553 NVGNLKEAF-----AVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELR 603
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 150/375 (40%), Gaps = 14/375 (3%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
+LK D TY T L++ Y R D+AL +M + + + +TYN ++ YS+ G +
Sbjct: 396 SLKPDHHTYNT---LVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAF 452
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYA 241
V + M + + + S + + D E M+ L E ++ D T
Sbjct: 453 HDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMK--LWENVLARGLLTDTITLN 510
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKT 300
K +++A ++L + D Y L Y ++GN E + D +EK
Sbjct: 511 VMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKK 570
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
I Y T++ K + ++ E G + A+I G+CN G++
Sbjct: 571 GIFPTIEM-YNTLISGAFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDK 629
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
A A +++EKG N + +A F K + ++ + + G++ + +
Sbjct: 630 AYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSLKEFL 689
Query: 421 -TSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMK 476
S + L + + VE + ++P N +Y+ I + GK D D +
Sbjct: 690 EPSATTCLKTQKIAESVENSTPK-KLLVP-NNIVYNVAIAGLCKAGKLTDAQKLFSDLLS 747
Query: 477 ADGIDEDEETKEILV 491
+D DE T IL+
Sbjct: 748 SDRFIPDEYTYTILI 762
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 4/268 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+ +L Y + AL F M + G S L+ N ++ K G+ V +M
Sbjct: 157 VFDMILKVYAEKGMVKNALHVFDNMGKYGRIPSLLSCNSLLSNLVKKGENFVALHVYDQM 216
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD F+ I +N+Y ++ +EM++ + L+ T S + Y
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAMIGD 276
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI- 311
++ + VL+ ER ++ + + LI Y G E ++++L K+ + ++
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTE--KKLVPDQHMH 334
Query: 312 -TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+++ + G +A +V G +T I N++I GYC +G + AE IL + +
Sbjct: 335 GVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMND 394
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+++ + GY AG + +
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGHVDEALK 422
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF-PDNFSYRICINSYGARSDLEGMEII 223
+ + YN + K G+ + +++ + + F PD ++Y I I+ D+
Sbjct: 718 NNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINK-AFN 776
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
LR+ + I+ + TY + K +D+A +L+K ++ + I YN LI
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAITYNTLIDGLI 836
Query: 284 SLGNKSEVLRL 294
G+ +E +RL
Sbjct: 837 KSGDVAEAMRL 847
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 44/288 (15%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
QTY AL + Y +A + M++ GI + YN ++ K KV D++ E
Sbjct: 542 QTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIE 601
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
++A+ + P +Y I + ++ EM + I L+ + + A+ + +
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM-IEKGITLNVNICSKIANSLFRLD 660
Query: 252 LIDKASDVLKK--------------------------------------AEERLEQKDGI 273
D+A +L+K ++L + I
Sbjct: 661 KFDEACLLLQKIVDFDLLLPGYQSLKEFLEPSATTCLKTQKIAESVENSTPKKLLVPNNI 720
Query: 274 GYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI--TMLEALMKLGEHEEAEKVLK 331
YN I+ G ++ +L+ + + R+I +Y ++ G+ +A +
Sbjct: 721 VYNVAIAGLCKAGKLTDAQKLFS-DLLSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRD 779
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
E L G + NA+I G C G V A+ +L L +KG TTPN+
Sbjct: 780 EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKG--TTPNA 825
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 182/455 (40%), Gaps = 47/455 (10%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEV---------------SDWMNRKGIC 94
L +K G + ++R L +KR S A+ + S KG+C
Sbjct: 36 LGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLC 95
Query: 95 VFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHF 154
C+ A +L +H + AE N D +Y T +++ + ++ KA + F
Sbjct: 96 AEKKCEEAAEL-----IH--MMAEDG-DNCPPDVVSYST---VIHGFFKEGDVGKAYTLF 144
Query: 155 RKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR 214
KM + GI + +T N ++ K +K VL +M ++I P+ +Y I+ Y +
Sbjct: 145 CKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSS 204
Query: 215 SDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
IL+EM +P++V TY K+ +A ++ + + D
Sbjct: 205 GQWTEAVRILKEMSRDGQRPNVV----TYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPD 260
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
Y L+ YA+ GN E+ + DL R + + + A K G +EA
Sbjct: 261 ATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFI 320
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+ + G D VI G C G + +A + +++ G + ++ + G+ G
Sbjct: 321 KMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYG 380
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF------VAALRT 445
K E+ + L + +G PD + T+++ +L EG V + + A
Sbjct: 381 KWEKAEE-----LFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPN 435
Query: 446 VIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGI 480
V+ N ++ FI + V +LLD M G+
Sbjct: 436 VVSYNTMIHGYFIAGEVGE---VMKLLDDMLLIGL 467
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 66/369 (17%), Positives = 137/369 (37%), Gaps = 59/369 (15%)
Query: 105 LDLIGRVHGFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+D + +V AE+ + D+ TY +L++ Y+ Q +A+ ++M G
Sbjct: 163 IDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQ 222
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+ +TYN ++ K+G + + ++ M PD +Y ++ Y +L M
Sbjct: 223 RPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNN 282
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+ +++ Q + + T++ + Y K +D+AS K ++ D + Y +I
Sbjct: 283 V-KDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGL 341
Query: 283 ASLGNKSEVLRLW--------------------------------DLEKTACKRYINRD- 309
+G + + + +L R I D
Sbjct: 342 CKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDV 401
Query: 310 --YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
+ M++ L K G+ EA+K+ +G + N +I GY G V +L+D
Sbjct: 402 TIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDD 461
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
++ G T ++ + G G KPD +++
Sbjct: 462 MLLIGLKPTAVTFNTLLDGMVSM---------------------GLKPDVDTCKTLIDSC 500
Query: 428 GDEGSVQDV 436
++G ++D+
Sbjct: 501 CEDGRIEDI 509
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 146/341 (42%), Gaps = 16/341 (4%)
Query: 115 LSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI 172
+ A + FS +++ E TY ++N ++ + ++ +M E G+ S TYN +
Sbjct: 91 MEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNAL 150
Query: 173 MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE-GMEIILREMESQ- 230
+ Y K G E ++L M + + P+ +Y I + + ++ M ++ + +ES+
Sbjct: 151 IDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRL 210
Query: 231 -PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
P +V TY S H K +D A +L E D Y+ I G
Sbjct: 211 TPSVV----TYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIE 266
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
E L++ K + Y +++ K G+ ++A +L ++ NA+I
Sbjct: 267 EANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALI 326
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
G C VQ A ++E +++KG T ++ ++ G + + + +S
Sbjct: 327 DGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVS---- 382
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIP 448
G++PD + T+ + G++++ E ++ + R V+P
Sbjct: 383 -SGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMP 422
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 115/270 (42%), Gaps = 1/270 (0%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY L+ + R++ +A++ KM E + S +TYN ++ K G + +L
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M + PD ++Y + I++ + +E ++ ++ + I + Y + Y KA
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKG-IKANEVIYTALIDGYCKAG 298
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+D A+ +L + + YN LI E L L + + Y
Sbjct: 299 KMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYT 358
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++ A++K G+ + A ++L + SG D I A I +C G ++ AE ++ + E+
Sbjct: 359 ILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFER 418
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
G ++ +V Y G F +K
Sbjct: 419 GVMPDALTYTLVIDAYGGLGLLNPAFDVLK 448
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 153/379 (40%), Gaps = 23/379 (6%)
Query: 116 SAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
SA S F+ + K + +Y L++ + D+ ++ F+KM+E + TY I+
Sbjct: 22 SAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIV 81
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
++G+ + ++ +EM+ + P+ +Y + IN+ + LE IL EM + +
Sbjct: 82 HALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEM-VEKGL 140
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
V TY + Y K +++ A ++L + YN LI + N +
Sbjct: 141 VPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMA 200
Query: 294 LWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
L LE + Y +++ K+G + A ++L +G D + I
Sbjct: 201 LLSKMLESRLTPSVVT--YNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDT 258
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
C G ++ A + L EKG + + GY AGK + + L+ +
Sbjct: 259 LCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLT-----E 313
Query: 412 GWKPDPKVITSILSKLGDEGSVQD----VEAFVA-ALRTVIPMNRQMYHAFIKANIRNGK 466
P+ +++ L E VQ+ +E+ + L+ +P Y I A ++ G
Sbjct: 314 DCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVP----TYTILIVAMLKEGD 369
Query: 467 G--VDELLDSMKADGIDED 483
+LD M + G D
Sbjct: 370 FDYAHRILDQMVSSGYQPD 388
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 104/270 (38%), Gaps = 13/270 (4%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY L+ +++ D A +M G Y + + G ++ D++
Sbjct: 353 TVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMM 412
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ M + + PD +Y + I++YG L +L+ M + T +H
Sbjct: 413 SMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRM---------FDTGCDPSHHTYS 463
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFL--ISLYASLGNKSEVLRLWD-LEKTACKRYI 306
+ + L K + + D I F ++ + L L++ + + C I
Sbjct: 464 CLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNI 523
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
N Y ++ L K+G A+K+ G S I N+++ C G+ +A ++
Sbjct: 524 NT-YAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVG 582
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
++E G S V+ G ++ G E+
Sbjct: 583 AMMEHGHLPLLESLNVLFCGLYEEGSKEKA 612
>gi|302798617|ref|XP_002981068.1| hypothetical protein SELMODRAFT_420699 [Selaginella moellendorffii]
gi|300151122|gb|EFJ17769.1| hypothetical protein SELMODRAFT_420699 [Selaginella moellendorffii]
Length = 537
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 197/467 (42%), Gaps = 53/467 (11%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM-NR 90
L++ + PL P + P + + K+ + + ++ LR +R QAL + DW+
Sbjct: 108 LWNELLPLTIPS--VGPVVKLTIGEDRKIGLPGILYVVGKLRTFRRSKQALSILDWLAEE 165
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL-KDDEKTYQTYGALLNCYVRQRQTDK 149
K F + + + + V+ AE F ++ K+ + + GA+ Y + DK
Sbjct: 166 KPFGEFDESLYKLHISIAFEVNSVHKAEKIFESVPKELQLQEKLLGAMAAGYASAHRMDK 225
Query: 150 ALSHFRKMKEMGIALSTL-TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
+ LS + Y ++ LY + Y+K + +KA + PD ++ +
Sbjct: 226 VEEIL-----LQCNLSAMEPYTALIKLYFRVALYDKAASLYKRIKAAKLEPDLAAFAALL 280
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
+S LE ++ RE+E + L + A IKA + +A
Sbjct: 281 RE---KSSLESLKP--RELEEDAEVALHHAG-AYEEELTIKAPVASQA------------ 322
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YITMLEALMKLGEHEEAE 327
++S Y LG ++V +LW K I Y+ +EA G+ AE
Sbjct: 323 --------MVVSGY--LGKAAQVSKLWKHIKQEKSSSIPAVCYLNAIEAFGAAGKVRSAE 372
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
KV E E++ + Y + A+I Y N + AEA+++DL G A + GY
Sbjct: 373 KVADEMEMAKSKY-VELSAAMIRVYSRNQMADKAEAVIDDLRANGVWNLFRPHAELITGY 431
Query: 388 FDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS---KLGD-EGSVQDVEAFVAAL 443
D+ + ++ + +K AL V K KP VI +L +L D EG+ V + A
Sbjct: 432 LDSNQPDQAMKALKVALLV----KLMKPTYAVILKMLPVFERLRDAEGAEDMVMRYKGA- 486
Query: 444 RTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
T + M + + ++ A + K ++E+ + I DEET+E+L
Sbjct: 487 -TDLRMYKGLLRIYVSAKV---KPLEEIEARLMLKKIPLDEETRELL 529
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 164/386 (42%), Gaps = 44/386 (11%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ Y L+ ++D+ L+ F +M+E+G ++ ++ ++S+ G+ + +L
Sbjct: 60 AFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLL 119
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EMK+ D Y +CI+ +G ++ EM++ +V D TY S K
Sbjct: 120 DEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKAN-GLVPDDVTYTSMMGVLCK 178
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR- 308
AN +D+A ++ ++ E+ + YN +I Y S G E L LE+ K I
Sbjct: 179 ANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSL--LERQRAKGCIPSV 236
Query: 309 -DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA----VIIG-YCNNGLVQNAE 362
Y +L L K G+ ++A ++ +E + +PN +IIG C G V+ A
Sbjct: 237 VAYNCILTCLGKKGKTDKALRIFEEMKRDA------MPNLPTYNIIIGMLCKAGNVEAAF 290
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK---PDPKV 419
+ + + E G + ++ A K + A S++ EG +K PD
Sbjct: 291 KVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDE-------ACSIF-EGMDYKVCSPDGAT 342
Query: 420 ITSILSKLGDEGSVQD----------------VEAFVAALRTVIPMNRQM-YHAFIKANI 462
S++ LG +G V D V + + +R +R+ H K +
Sbjct: 343 FCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMM 402
Query: 463 RNGKGVDELLDSMKADGIDEDEETKE 488
R+G D +L + D + + ET++
Sbjct: 403 RSGCSPDLMLLNTYMDCVFKAGETEK 428
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 178/462 (38%), Gaps = 71/462 (15%)
Query: 72 LRKRKRFSQALEVSDWM--NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEK 129
L K R +A+E+ + M NR+ PC +A ++G E+Y + K
Sbjct: 176 LCKANRLDEAVEIFEQMEQNRQ-----VPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAK 230
Query: 130 ----TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+ Y +L C ++ +TDKAL F +MK + + TYN I+ + K G E
Sbjct: 231 GCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMP-NLPTYNIIIGMLCKAGNVEAA 289
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
V MK +FP+ + I I+ L+ I M+ + D +T+ S
Sbjct: 290 FKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKV-CSPDGATFCSLID 348
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACK- 303
K +D A + ++ + + + + Y LI + K + +++ ++ ++ C
Sbjct: 349 GLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSP 408
Query: 304 ------RYIN---------------------------RDYITMLEALMKLGEHEEAEKVL 330
Y++ R Y ++ +L+K G E ++
Sbjct: 409 DLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELY 468
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+ G DTR N VI G+C +G V A +LE++ G T ++ V G
Sbjct: 469 YAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKI 528
Query: 391 GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMN 450
+ + + + A S G + + + +S++ G G V EA++
Sbjct: 529 DRLDEAYMLFEEAKS-----NGIELNQVIYSSLIDGFGKVGRVD--EAYLVM-------- 573
Query: 451 RQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVC 492
+M + N+ + DG+ + EE E LVC
Sbjct: 574 EEMMQKGLTPNVYTWNCL--------LDGLVKAEEINEALVC 607
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 164/403 (40%), Gaps = 24/403 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L K ++ +A + + M+ K +C +D +G+ A + + D
Sbjct: 311 MIDRLCKAQKLDEACSIFEGMDYK-VCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDA 369
Query: 128 EK--TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
++ Y +L+ + + + + +++M G + + N M K G+ EK
Sbjct: 370 DQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKG 429
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
+ E+KA+ PD SY I I+S + M+ Q VLD Y +
Sbjct: 430 RALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQG-CVLDTRAYNTVID 488
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
+ K+ ++KA +L++ + + Y ++ A + E L++ K+
Sbjct: 489 GFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIEL 548
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y ++++ K+G +EA V++E G + PN +GLV+ AE I
Sbjct: 549 NQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLT-----PNVYTWNCLLDGLVK-AEEIN 602
Query: 366 EDLV----EKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
E LV K TPN ++ ++ G K + F + ++ +G KP+
Sbjct: 603 EALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQE-----MQKQGLKPNTIT 657
Query: 420 ITSILSKLGDEGSVQDVEAFVAALRTV--IPMNRQMYHAFIKA 460
T+++S L G+V + R IP + Y+A I+
Sbjct: 658 YTAMISGLAKSGNVAQASSLFERFRASGGIP-DSASYNAMIEG 699
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 104/223 (46%), Gaps = 7/223 (3%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TYG++++ + + D+A F + K GI L+ + Y+ ++ + K G+ ++ V+
Sbjct: 514 TVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVM 573
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEII---LREMESQPHIVLDWSTYASAAHF 246
EM K + P+ +++ ++ ++ + +++++ P+ + TY +
Sbjct: 574 EEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQI----TYCILING 629
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
K +KA ++ +++ + + I Y +IS A GN ++ L++ + +
Sbjct: 630 LCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPD 689
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+ Y M+E L +A ++ +E L G S T+ A++
Sbjct: 690 SASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALL 732
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 121 FSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
F ++KD + T TY L+N + R+ +KA +++M++ G+ +T+TY ++ +K
Sbjct: 608 FQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAK 667
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
+G + + +A PD+ SY I EG+ I R +++
Sbjct: 668 SGNVAQASSLFERFRASGGIPDSASYNAMI---------EGLSIANRALDA 709
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 168/398 (42%), Gaps = 36/398 (9%)
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
A ++L+ ++ GF+ + + D TY T+ L + + R D A F +M+
Sbjct: 223 ADAMELVWKLKGFMEG----AGIPPDVYTYSTF---LEAHCKARDFDAAKKVFEEMRRRD 275
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
A++ +TYN ++ ++G E+ EM + PD F+Y +N L+ +
Sbjct: 276 CAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAK 335
Query: 222 IILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+L EM +P++V+ YA+ ++K +A D+L + Q + I Y+ L
Sbjct: 336 ALLDEMSCSGLKPNVVV----YATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNL 391
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
I +G +L + R Y +++ + + + A ++L E SG
Sbjct: 392 IRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSG- 450
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEA-----ILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
+PNA G NGL QN E+ +LE+++ +G +A + G+ G
Sbjct: 451 ----ILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHI 506
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIP--- 448
+ ++ V PD S++ L G +++ E + A + R ++P
Sbjct: 507 SLACESLENMTKANV-----LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEF 561
Query: 449 MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEET 486
+ H + K RN + D+LL M G+ + +T
Sbjct: 562 TYSGLIHGYCKT--RNLEKADQLLQQMLNSGLKPNADT 597
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 154/347 (44%), Gaps = 22/347 (6%)
Query: 105 LDLIGRVHGFLSAESYFSNLK-----DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
L +GR+ AE Y++ ++ DE TY L++ Y + R +KA ++M
Sbjct: 535 LSTVGRIE---EAEEYYAQVQKRGLVPDEFTYS---GLIHGYCKTRNLEKADQLLQQMLN 588
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
G+ + TY D++ Y K+ +EKV +L M PDN Y I I + ++E
Sbjct: 589 SGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEV 648
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
++L E+E +V D Y+S K ++KA +L + + + + YN LI
Sbjct: 649 AFMVLTEVEKN-GLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALI 707
Query: 280 SLYASLGNKSEVLRLWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
+ G+ S ++D L K + Y +++ K G+ +A + K+ G
Sbjct: 708 DGFCRSGDISRARNVFDSILAKGLLPNCVT--YTALIDGNCKNGDITDAFDLYKDMLDRG 765
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+ D + N + G + ++ A + E++ +G A + ++ + G+ G+
Sbjct: 766 IAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHV-SLFSTLVRGFCKRGR----L 820
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
Q + L V ++ + P+ + + +++++ G G + + A L+
Sbjct: 821 QETEKLLHVMMD-REIVPNAQTVENVITEFGKAGKLCEAHRVFAELQ 866
>gi|255661164|gb|ACU25751.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 426
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 180/413 (43%), Gaps = 31/413 (7%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRV-GEL---QRIIRDLRKRKRFSQALE 83
++ T ++I+ G G + L +W++ + RV G+L +I RK +S+A+
Sbjct: 8 DRYTYSTLITHFGKEGL-FDAAL-SWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 84 VSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT--YGALLN 139
+ + R G F P + +++ G+ F A S S ++ T T Y LL
Sbjct: 66 IFSRLKRSG---FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 140 CYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP 199
YV ++ +ALS F +M+E+ L T N ++ +Y + G ++ + M+ I P
Sbjct: 123 MYVENKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 200 DNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
+ SY + YG ++L G I L + + +I + TY S Y K +KA+++
Sbjct: 183 NVVSYNTLLRVYG-DAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
+++ + R + + I Y+ +IS++ +G L+ +++ Y TM+ A +
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYER 301
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG-YCNNGLVQNAEAILEDLVEKGKA---T 375
G A+++L E + N IP + I G ++ A + ++ G+ T
Sbjct: 302 AGLVAHAKRLLHELKRPDN-----IPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDIT 356
Query: 376 TPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
+ + Y G F M+ G G+ PD VI +L+ G
Sbjct: 357 VFERMIHLFSKYKKYGNVVEVFDKMR--------GLGYFPDSNVIALVLNAYG 401
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 157/405 (38%), Gaps = 60/405 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+NC+ + + +KA S+F +MK G+ + +T++ + + K G ++ + +M
Sbjct: 272 TYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQM 331
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + + P+ F+Y ++ L+ ++L EM Q +V + TY K
Sbjct: 332 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG-LVPNVVTYTVMVDGLCKEGK 390
Query: 253 IDKASDVL----------------------------KKAEERLEQKDGIGYNFLISLYAS 284
+ +A +VL ++A + L Q G +SLY +
Sbjct: 391 VAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGT 450
Query: 285 LGNKSEVLRLWDLEK--------------TACKRYINR-DYITMLEALMKLGEHEEAEKV 329
L +W L K C N Y T+++AL K G+ EA +
Sbjct: 451 L--------IWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVAL 502
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
L + SG + A+I G C G + A + + E G ++ + G+
Sbjct: 503 LHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCK 562
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF-VAALRTVIP 448
G + M + KG D V TS++ + ++QD A + + +
Sbjct: 563 IGSLNKAMHLMNEMID-----KGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQ 617
Query: 449 MNRQMYHAFIKA--NIRNGKGVDELLDSMKADGIDEDEETKEILV 491
++ Y FI N+ + +L M GI D+ L+
Sbjct: 618 LDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLI 662
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 149/364 (40%), Gaps = 13/364 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +++ ++ + +A + F +MK MG + +TYN ++ Y K G E+V +++EM
Sbjct: 202 TFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEM 261
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ D +Y IN + +E EM+ Q +V + T+++ + K L
Sbjct: 262 RKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQG-VVANVVTFSTFVDAFCKEGL 320
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+ +A + + R + Y L+ G + + L D + + + Y
Sbjct: 321 VQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT--Y 378
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
M++ L K G+ EA+ VL E G + + +I G+ N + A +L +
Sbjct: 379 TVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKN 438
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
KG + + + G K + +L + G G +P+ + T+I+ L
Sbjct: 439 KGMELDVSLYGTLIWGLCKDQKVDEA-----KSLLHKMAGCGLRPNTVIYTTIMDALFKA 493
Query: 431 GSVQDVEAFV-AALRTVIPMNRQMYHAFIKANIRNGKGVDEL--LDSMKADGIDEDEETK 487
G + A + L + N Y A I + G + + + M+ G+D + +
Sbjct: 494 GKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAY 553
Query: 488 EILV 491
L+
Sbjct: 554 TALI 557
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/313 (18%), Positives = 127/313 (40%), Gaps = 7/313 (2%)
Query: 155 RKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR 214
R++ ++ + T+N ++ K G+ + + MKA PD +Y I+ YG
Sbjct: 189 RRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKC 248
Query: 215 SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
DLE +E ++ EM + D TY + + + K ++KA + + + + +
Sbjct: 249 GDLEEVEQLVSEMR-KSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVT 307
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
++ + + G E ++L+ + Y ++++ K G ++A +L E
Sbjct: 308 FSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV 367
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G + ++ G C G V A+ +L + G + + G+F +E
Sbjct: 368 HQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSE 427
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQM 453
R + ++ KG + D + +++ L + V + ++ + + + N +
Sbjct: 428 RALDLLNQ-----MKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVI 482
Query: 454 YHAFIKANIRNGK 466
Y + A + GK
Sbjct: 483 YTTIMDALFKAGK 495
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 140/385 (36%), Gaps = 66/385 (17%)
Query: 5 LKLSTNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPE---LDNWVKNGNKVR 61
+KL ++ + + F YT+ ++ T R++ LD V G
Sbjct: 325 MKLFAQMRVRGMMPNEFTYTSLVDGTC----------KAGRLDDAIVLLDEMVHQGLVPN 374
Query: 62 VGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHG-FLSAES- 119
V ++ L K + ++A V M R G+ A +L +HG F++ S
Sbjct: 375 VVTYTVMVDGLCKEGKVAEADNVLSLMERGGV-------KANELLYTTLIHGHFMNNNSE 427
Query: 120 ----YFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
+ +K+ E YG L+ + ++ D+A S KM G+ +T+ Y IM
Sbjct: 428 RALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIM 487
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
K G+ + +L I F QP++
Sbjct: 488 DALFKAGKESEAVALL-----HKILDSGF---------------------------QPNV 515
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
V TY + KA I +A K E + Y LI + +G+ ++ +
Sbjct: 516 V----TYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMH 571
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
L + Y ++++ MK ++A + + SG D I G+C
Sbjct: 572 LMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFC 631
Query: 354 NNGLVQNAEAILEDLVEKGKATTPN 378
N ++Q A +L +++ G TP+
Sbjct: 632 NMNMMQEARGVLSEMI--GTGITPD 654
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 41/97 (42%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +L++ Y++Q A + KM E G+ L Y + + ++ VL+EM
Sbjct: 587 VYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEM 646
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
I PD Y I Y ++E + EMES
Sbjct: 647 IGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMES 683
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 165/395 (41%), Gaps = 50/395 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG ++N ++ D ALS +KM++ I + YN I+ K + ++ TEM
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 193 KAKNIFPDNFSYR---ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
K I PD F+Y C+ +YG SD + + E + P++V T+++ ++K
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV----TFSALIDAFVK 340
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE----------- 298
+ +A + + +R D Y+ LI+ + E +++L
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 299 -----KTACK-----------RYINR--------DYITMLEALMKLGEHEEAEKVLKEWE 334
K CK R +++ Y T++ + + + A+ V K+
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G + N ++ G C NG + A + E L ++ ++ G AGK E
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM-NRQM 453
G++ L + KG P+ +++S +GS ++ ++ + ++ P+ N
Sbjct: 521 DGWE-----LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 454 YHAFIKANIRNG--KGVDELLDSMKADGIDEDEET 486
Y+ I+A +R+G + EL+ M++ G D T
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 131/298 (43%), Gaps = 8/298 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ AL++ +V++ + +A + +M + I TY+ ++ + + ++ + M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 193 KAKNIFPDNFSYRICINSYG-ARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
+K+ FP+ +Y I + A+ EGME+ REM SQ +V + TY + H + +A
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL-FREM-SQRGLVGNTVTYTTLIHGFFQAR 447
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
D A V K+ + + YN L+ G ++ + +++ + + Y
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
M+E + K G+ E+ ++ L G S + N +I G+C G + A+++L+ + E
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G ++ + G E + +K S G+ D I + + L D
Sbjct: 568 GPLPNSGTYNTLIRARLRDGDREASAELIKEMRSC-----GFAGDASTIGLVTNMLHD 620
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 168/414 (40%), Gaps = 63/414 (15%)
Query: 39 LGNPGTRIEPELDNWVKNGNKVRV-----GELQRIIRDLRKRKRFSQALEVSDWMNRKGI 93
+GNP T P N +G R G+ + I+R+ R S ++V D ++ G
Sbjct: 21 IGNPPT--VPSFFNLCGSGCWERSFASASGDYREILRN-----RLSDIIKVDDAVDLFGD 73
Query: 94 CVFA-PCDHAVQ----LDLIGRVHGF---LSAESYFSNLKDDEKTYQTYGALLNCYVRQR 145
V + P V+ L + +++ F +S L Y TY +NC+ R+
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY-TYSIFINCFCRRS 132
Query: 146 QTDKALSHFRKMKEMG-----IALSTLT--------YNDIMCLYSKTGQYEKVPDVLT-- 190
Q AL+ KM ++G + LS+L +D + L + + PD T
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 191 --------------------EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
+M + PD +Y +N R D++ +L++ME +
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME-K 251
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
I D Y + K +D A ++ + + + + D Y+ LIS + G S+
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311
Query: 291 VLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
RL +R IN + +T +++A +K G+ EAEK+ E D ++
Sbjct: 312 ASRLL---SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+I G+C + + A+ + E ++ K +++ + G+ A + E G + +
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 126/308 (40%), Gaps = 24/308 (7%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+D +VK G V E +++ ++ KR S +N G C+ D A +
Sbjct: 335 IDAFVKEGKLV---EAEKLYDEMIKRSIDPDIFTYSSLIN--GFCMHDRLDEAKHM---- 385
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+ ++ F N+ TY L+ + + ++ ++ + FR+M + G+ +T+TY
Sbjct: 386 --FELMISKDCFPNV-------VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
++ + + + V +M + + P+ +Y I ++ L ++ ++
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ- 495
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + D TY KA ++ ++ + + I YN +IS + G+K
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
E L K + Y T++ A ++ G+ E + +++KE G + D A
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD-----AST 610
Query: 350 IGYCNNGL 357
IG N L
Sbjct: 611 IGLVTNML 618
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 164/356 (46%), Gaps = 18/356 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L++ ++ + ++A F ++ + G+ + +++N ++ Y K+G ++ + M
Sbjct: 228 FNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM 287
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+FPD F+Y + IN L+ + EM + +V + T+ + + +
Sbjct: 288 ENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDR-GLVPNDVTFTTLINGHCVTGRA 346
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---Y 310
D ++ ++ + + D I YN LI+ +G+ E +L +E T +R + D Y
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV-IEMT--QRGLKPDKFTY 403
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+++ K G+ E A ++ KE G D A+I G+C G V AE L +++E
Sbjct: 404 TMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLE 463
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G ++ +V G+ G + GF+ +K ++ G P +L+ L +
Sbjct: 464 AGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE-----MQCDGHVPGVVTYNVLLNGLCKQ 518
Query: 431 GSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNGKGVDELLDSMKAD-GIDED 483
G +++ + A+ V+P + Y+ ++ + ++G D D ++++ G+ +D
Sbjct: 519 GQMKNANMLLDAMLNLGVVP-DDITYNILLEGHCKHGNRED--FDKLQSEKGLVQD 571
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/396 (20%), Positives = 152/396 (38%), Gaps = 69/396 (17%)
Query: 15 NAVFSRFYYTNRINKTTLYSIISPLGNPGTR-----IEPELDNWVKNGNKVRVGELQRII 69
N + R ++IN+ L + +G G R ++ + K+GN + + R+
Sbjct: 229 NVLMHRLCKEHKINEAQL--LFGEIGKRGLRPTVVSFNTLINGYCKSGN---LDQGFRLK 283
Query: 70 RDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEK 129
R + + + F S +N G+C D A +L L E L ++
Sbjct: 284 RFMMENRVFPDVFTYSVLIN--GLCKEGQLDDANKLFL----------EMCDRGLVPNDV 331
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T+ T L+N + + D + +++M G+ +TYN ++ K G + ++
Sbjct: 332 TFTT---LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM + + PD F+Y + I+ DLE I +EM
Sbjct: 389 IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM---------------------- 426
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+E +E D + + LIS + G E R A + +
Sbjct: 427 -------------VKEGIEL-DNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDAT 472
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ K G+ + K+LKE + G+ N ++ G C G ++NA +L+ ++
Sbjct: 473 YTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAML 532
Query: 370 EKGKATTPNSWAVVAAGY--------FDAGKTERGF 397
G ++ ++ G+ FD ++E+G
Sbjct: 533 NLGVVPDDITYNILLEGHCKHGNREDFDKLQSEKGL 568
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 142/322 (44%), Gaps = 18/322 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L++ Y R D+A+ +++M E GI TYN ++ ++ G++ + + EM
Sbjct: 468 TYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEM 527
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
+ ++ PD SY +++Y L+ M+ + ++ +Q PH +W +
Sbjct: 528 EDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPH---NWLVKT----LVLV 580
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
N ++ S+ K +E ++ + N L ++ + G V ++ ++ + IN
Sbjct: 581 NNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHS 640
Query: 310 ---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y +++ +LG+ E+ E +L E + SG D N VI Y G ++ A +
Sbjct: 641 AATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFS 700
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
++ G ++ + Y E ++ Y+ +G KP+ + SIL
Sbjct: 701 EMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVR-----YLVAQGCKPNERTYNSILEG 755
Query: 427 LGDEGSVQDVEAFVAALRTVIP 448
G + + ++F++ L + P
Sbjct: 756 YCRHGRMVEAKSFLSNLPKIYP 777
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 170/441 (38%), Gaps = 97/441 (21%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV------- 185
T+ +LL+ Y + R+ ++A+ +KM+ G S +TYN ++ Y K G E+
Sbjct: 293 TFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEM 352
Query: 186 ------PDVLT----------------------EMKAKNIFPDNFSYRICINSYGARSDL 217
PDV+T EM P+ +Y I +G R
Sbjct: 353 EFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKF 412
Query: 218 EGMEIILREMESQPHI--VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
M I+ ++ S ++ V+ W+T + + + L + S V K+ ++ + Y
Sbjct: 413 TEMMIVFDDLRSAGYVPDVVTWNTLLAV---FGQNGLDSEVSGVFKEMKKAGYIPERDTY 469
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYIN-------RDYITMLEALMKLGEHEEAEK 328
LIS Y+ G L+D KR I Y +L AL + G +AEK
Sbjct: 470 VSLISSYSRCG-------LFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEK 522
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV-----V 383
+ E E D ++++ Y N + +A+ ED+ + P++W V V
Sbjct: 523 LFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIY--AQRIEPHNWLVKTLVLV 580
Query: 384 AAGYFDAGKTERGFQ------------CMKAALSVYVEGKGWKPDPKVIT---------- 421
+TE+ FQ + A +S+Y + K K +V+T
Sbjct: 581 NNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHS 640
Query: 422 --------SILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG--KGVDE 470
+ S+LGD + EA + +++ + +R Y+ I A R G K
Sbjct: 641 AATYNSLMHMYSRLGD---CEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASR 697
Query: 471 LLDSMKADGIDEDEETKEILV 491
L MK G+ D T I +
Sbjct: 698 LFSEMKCSGVKPDIVTYNIFI 718
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 154/364 (42%), Gaps = 24/364 (6%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG-QYEKVPDVLT 190
Y AL++ + R + A++ FR+M + G+ + +TYN ++ +YSK +++V ++
Sbjct: 186 SAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLVD 245
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFY 247
MK I D ++Y I+ R + EM++ +P D T+ S Y
Sbjct: 246 SMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEP----DKVTFNSLLDVY 301
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTACKRYI 306
KA ++A VLKK E + YN LIS Y G E L L ++E K +
Sbjct: 302 GKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 361
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y T++ L ++G+ + A E +G S + NA+I + G + +
Sbjct: 362 V-TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFD 420
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAG---KTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
DL G +W + A + G + F+ MK A G+ P+ S+
Sbjct: 421 DLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKA--------GYIPERDTYVSL 472
Query: 424 LSKLGDEGSV-QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGV--DELLDSMKADGI 480
+S G Q +E + + I + Y+A + A R G+ V ++L M+
Sbjct: 473 ISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDC 532
Query: 481 DEDE 484
DE
Sbjct: 533 KPDE 536
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 129/310 (41%), Gaps = 12/310 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++C R+ +A F +MK G +T+N ++ +Y K ++E+ VL +M
Sbjct: 258 TYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKM 317
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIK 249
+ P +Y I++Y LE + +EME +P +V TY + +
Sbjct: 318 ENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV----TYTTLISGLDR 373
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
ID A + + YN LI ++ G +E++ ++D ++A
Sbjct: 374 IGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVT 433
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ T+L + G E V KE + +G + ++I Y GL A I + ++
Sbjct: 434 WNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMI 493
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E G +++ V + G R Q K L +E + KPD +S+L +
Sbjct: 494 EAGIYPDISTYNAVLSALARGG---RWVQAEK--LFAEMEDRDCKPDELSYSSLLHAYAN 548
Query: 430 EGSVQDVEAF 439
+ ++A
Sbjct: 549 AKKLDKMKAL 558
>gi|255661142|gb|ACU25740.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 426
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 180/413 (43%), Gaps = 31/413 (7%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRV-GEL---QRIIRDLRKRKRFSQALE 83
++ T ++I+ G G + L +W++ + RV G+L +I RK +S+A+
Sbjct: 8 DRYTYSTLITHFGKEGL-FDAAL-SWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 84 VSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLN 139
+ + R G F P + +++ G+ F A S S ++ T +Y LL
Sbjct: 66 IFSRLKRSG---FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTLLT 122
Query: 140 CYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP 199
YV ++ +ALS F +M+E+ L T N ++ +Y + G ++ + M+ I P
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 200 DNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
+ SY + YG ++L G I L + + +I + TY S Y K +KA+++
Sbjct: 183 NVVSYNTLLRVYG-DAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
+++ + R + + I Y+ +IS++ +G L+ +++ Y TM+ A +
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYER 301
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG-YCNNGLVQNAEAILEDLVEKGKA---T 375
G A+++L E + N IP + I G ++ A + ++ G+ T
Sbjct: 302 AGLVAHAKRLLHELKRPDN-----IPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDIT 356
Query: 376 TPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
+ + Y G F M+ G G+ PD VI IL+ G
Sbjct: 357 VFERMIHLFSKYKKYGNVVEVFDKMR--------GLGYFPDSNVIALILNAYG 401
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 173/419 (41%), Gaps = 67/419 (15%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLK 125
++ L K+ RF +V M +G +P + +D R FL A F +
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGA---SPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220
Query: 126 DDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ + T Y L+ + + +A S FR M+ G+ + TYN +M Y K +
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
K ++ EM + P+ ++ I I+ ++D EM S ++D +++
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGILIDGL-CKTD---------EMVSARKFLIDMASFGVV 330
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTAC 302
+ ++ YN LI Y GN SE L L ++EK
Sbjct: 331 PNIFV--------------------------YNCLIDGYCKAGNLSEALSLHSEIEKHEI 364
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+ Y +++ L + EEA+ +L+E + G + N +I GYC G ++ A
Sbjct: 365 LPDV-FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG--KGWKPDPKVI 420
+ + EKG +++ + GY AGK M+AA+ +Y E KG PD
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGK-------MEAAMGLYTEMVIKGLLPDVVAY 476
Query: 421 TSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADG 479
T+++ +G+ + EAF ++++M A + N+ + L+D + DG
Sbjct: 477 TALIDGHFKDGNTK--EAF--------RLHKEMQEAGLHPNVFT---LSCLIDGLCKDG 522
>gi|302801572|ref|XP_002982542.1| hypothetical protein SELMODRAFT_421995 [Selaginella moellendorffii]
gi|300149641|gb|EFJ16295.1| hypothetical protein SELMODRAFT_421995 [Selaginella moellendorffii]
Length = 537
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 197/467 (42%), Gaps = 53/467 (11%)
Query: 32 LYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM-NR 90
L++ + PL P + P + + K+ + + ++ LR +R QAL + DW+
Sbjct: 108 LWNELLPLTIPS--VGPVVKLTIGEDRKIGLPGILYVVGKLRTFRRSKQALSILDWLAEE 165
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL-KDDEKTYQTYGALLNCYVRQRQTDK 149
K F + + + + V+ AE F ++ K+ + + GA+ Y + DK
Sbjct: 166 KPFGEFDESLYKLHISIAFEVNSVHKAEKIFESVPKELQLQEKLLGAMAAGYASAHRMDK 225
Query: 150 ALSHFRKMKEMGIALSTL-TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
+ LS + Y ++ LY + Y+K + +KA + PD ++ +
Sbjct: 226 VEEIL-----LQCNLSAMEPYTALIKLYFRVALYDKAASLYKRIKAAKLEPDLAAFAALL 280
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
+S LE ++ RE+E + L + A IKA + +A
Sbjct: 281 RE---KSSLESLKP--RELEEDAEVALHHAG-AYEEELTIKAPVASQA------------ 322
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YITMLEALMKLGEHEEAE 327
++S Y LG ++V +LW K I Y+ +EA G+ AE
Sbjct: 323 --------MVVSGY--LGKAAQVTKLWKRIKQEKSSSIPAVCYLNAIEAFGAAGKVRSAE 372
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
KV E E++ + Y + A+I Y N + AEA+++DL G A + GY
Sbjct: 373 KVADEMEMAKSKY-VELSAAMICVYSRNQMADKAEAVIDDLRANGVWNLFRPHAELITGY 431
Query: 388 FDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS---KLGD-EGSVQDVEAFVAAL 443
D+ + ++ + +K AL V K KP VI +L +L D EG+ V + A
Sbjct: 432 LDSNQPDQAMKALKVALLV----KLMKPTYAVILKMLPVFERLRDAEGAEDMVMRYKGA- 486
Query: 444 RTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
T + M + + ++ A + K ++E+ + I D+ET+E+L
Sbjct: 487 -TDLRMYKGLLRIYVSAKV---KPLEEIEARLMLKKIPLDDETRELL 529
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 152/365 (41%), Gaps = 15/365 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y ++N + R+ Q +KA + F +M + GI + +TY ++ K ++ V +M
Sbjct: 163 AYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQM 222
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PDN +Y I+ Y + + + +L EM + + D TYA + K
Sbjct: 223 IDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTH-GLEPDCITYALLLDYLCKNGR 281
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+A + + D Y L+ YA+ G SE+ DL R +
Sbjct: 282 CREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNI 341
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
M A K EEA + + G S D A+I C G V +A ++ +G
Sbjct: 342 MFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEG 401
Query: 373 KATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
TPN ++ + G GK E+ + L V +G D +++ L +E
Sbjct: 402 --VTPNIFVFSSLVYGLCTVGKWEKAEE-----LFFEVLDQGICVDAVFFNTLMCNLCNE 454
Query: 431 GSVQDVEAFV-AALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEET 486
G V + + + +R + N Y+ + + G+ +DE LLD M ++G+ +E T
Sbjct: 455 GRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGR-IDEAAKLLDVMVSNGLKPNEFT 513
Query: 487 KEILV 491
IL+
Sbjct: 514 YTILL 518
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 139/369 (37%), Gaps = 16/369 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV-LTE 191
TY L+ C+ R + + + F + + G ++ + + ++ + ++ D+ L
Sbjct: 92 TYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLR 151
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYI 248
M PD +Y IN + +E + EM Q P++V TY +
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVV----TYTTVIDGLC 207
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
KA ++D+A V ++ +R + D YN LI Y S G EV+++ + T
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCI 267
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y +L+ L K G EA G D I ++ GY G + + L+ +
Sbjct: 268 TYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
V G + + ++ Y E + +G PD +++ L
Sbjct: 328 VGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNK-----MRQQGLSPDVVSFGALIDALC 382
Query: 429 DEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEE 485
G V D V F + + N ++ + + GK +EL + GI D
Sbjct: 383 KLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAV 442
Query: 486 TKEILVCTM 494
L+C +
Sbjct: 443 FFNTLMCNL 451
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 102/258 (39%), Gaps = 42/258 (16%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LL Y + R+ D A S FR+M G+ TYN I+ +TG++ + ++ M
Sbjct: 513 TYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNM 572
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
D ++Y I +N K N
Sbjct: 573 INSRTKCDIYTYNIILNG------------------------------------LCKNNF 596
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+D+A + ++ + Q D + +N +I G K + + DL T + D +T
Sbjct: 597 VDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAM---DLFATISAYGLVPDVVT 653
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ E L++ G E + + E SG + ++ + NA++ + G + A L L
Sbjct: 654 YRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLD 713
Query: 370 EKGKATTPNSWAVVAAGY 387
EK + ++ +++ + Y
Sbjct: 714 EKNFSLEASTTSMLISLY 731
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 122/297 (41%), Gaps = 9/297 (3%)
Query: 101 HAVQLDLIGRVHGFLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
+A+ LD + + A +F ++ K + Y LL+ Y + + S M
Sbjct: 269 YALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMV 328
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
G++ + +N + C Y+K E+ + +M+ + + PD S+ I++ ++
Sbjct: 329 GNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVD 388
Query: 219 GMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
+ +M ++ P+I + ++S + +KA ++ + ++ D + +
Sbjct: 389 DAVLQFNQMINEGVTPNIFV----FSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFF 444
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
N L+ + G E RL DL R Y T++ G +EA K+L
Sbjct: 445 NTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVS 504
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
+G + ++ GYC V +A ++ +++ KG ++ + G F G+
Sbjct: 505 NGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGR 561
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 70/370 (18%), Positives = 133/370 (35%), Gaps = 78/370 (21%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ + + D+A F++M + G+ TYN ++ Y TG++++V +L EM
Sbjct: 198 TYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM 257
Query: 193 KAKNIFPDNFSYRI-----CINSY--------------GARSDLEGMEIILR-------- 225
+ PD +Y + C N G + D+ I+L
Sbjct: 258 STHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGAL 317
Query: 226 -EMESQPHIVLDWSTYASAAHF------YIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
EM S +++ + F Y K +I++A + K ++ D + + L
Sbjct: 318 SEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGAL 377
Query: 279 ISLYASLGN-------------------------------------KSEVLRLWDLEKTA 301
I LG K+E L L++
Sbjct: 378 IDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGI 437
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
C + + T++ L G EA++++ G + N ++ G+C G + A
Sbjct: 438 CVDAVF--FNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEA 495
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
+L+ +V G ++ ++ GY A + + + + L KG P
Sbjct: 496 AKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLM-----KGVTPVVATYN 550
Query: 422 SILSKLGDEG 431
+IL L G
Sbjct: 551 TILHGLFQTG 560
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 14/241 (5%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLI- 108
LD V NG K ++R K +R A + M KG+ + + L
Sbjct: 499 LDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQ 558
Query: 109 -GRVHGFLSAESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
GR F A + N+ + TY +LN + D+A FR++ L
Sbjct: 559 TGR---FSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLD 615
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY---GARSDLEGMEI 222
++T+N ++ K G+ E D+ + A + PD +YR+ + G+ + +G+
Sbjct: 616 SVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFS 675
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+ + + P+ + + H I +A L K +E+ + + LISLY
Sbjct: 676 AMEKSGTAPNSHMLNALVRRLLH----RGDISRAGVYLYKLDEKNFSLEASTTSMLISLY 731
Query: 283 A 283
+
Sbjct: 732 S 732
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 185/475 (38%), Gaps = 59/475 (12%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++R L R R + AL V D M + CV P + V ++ R G+ SA L
Sbjct: 122 VVRGLCGRGRIADALAVLDEMTSRS-CVPIPPMYHVIIESACRSGGYSSALRVLEALHAK 180
Query: 128 EKTYQTYGA--LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MCLYSKTGQY 182
T T ++N Q D+ L RK+ G ++YN + +C + G
Sbjct: 181 GSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDV 240
Query: 183 E-------KVPDVLTEMKAKNIFPDNFSYR-----IC--------------INSYGARSD 216
E KV + L++M PD Y IC + SYG + +
Sbjct: 241 EELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPN 300
Query: 217 L----------------EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVL 260
+ E E +L EM Q + LD T+ F+ + L+D+ ++L
Sbjct: 301 VVCYNTVLKGICSADRWEKAEELLTEM-YQKNCPLDDVTFNILVDFFCQNGLVDRVIELL 359
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSE-VLRLWDLEKTACKRYINRDYITMLEALMK 319
++ E D I Y +I+ + G E V+ L ++ CK Y +L+ L
Sbjct: 360 EQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPN-TISYTIVLKGLCS 418
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
+AE+++ G + N +I C GLV+ A +L+ ++ G S
Sbjct: 419 TERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLIS 478
Query: 380 WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-EA 438
++ V G AGKTE + + ++ KG P+ +S+ L EG + V +
Sbjct: 479 YSTVIDGLGKAGKTEEALELLNVMIN-----KGITPNVITYSSMAFALAREGRIDKVIQM 533
Query: 439 FVAALRTVIPMNRQMYHAFIKANI--RNGKGVDELLDSMKADGIDEDEETKEILV 491
F I + +Y+A I + R + L M ++G +E T L+
Sbjct: 534 FDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALI 588
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 109/279 (39%), Gaps = 8/279 (2%)
Query: 115 LSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
L E Y N D+ T+ L++ + + D+ + +M E G +TY ++
Sbjct: 323 LLTEMYQKNCPLDDVTFNI---LVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVIN 379
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
+ K G ++ +L M + P+ SY I + + E ++ M Q +
Sbjct: 380 GFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQ-GCL 438
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
+ T+ + +F K L+++A ++LK+ D I Y+ +I G E L L
Sbjct: 439 PNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALEL 498
Query: 295 WD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
+ + K I Y +M AL + G ++ ++ + + D + NAVI
Sbjct: 499 LNVMINKGITPNVIT--YSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSL 556
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
C A L +V G +++ + G G
Sbjct: 557 CKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEG 595
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 122/315 (38%), Gaps = 25/315 (7%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y A++ Y R Q + A R + + + TY ++ G+ VL EM
Sbjct: 87 YNAMVAGYCRVGQVEAA---RRLAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMT 143
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMES--QPHIVLDWSTYASAAHFYIKAN 251
+++ P Y + I S RS G LR +E+ LD +
Sbjct: 144 SRSCVPIPPMYHVIIES-ACRSG--GYSSALRVLEALHAKGSTLDTGNCNLVINAICDQG 200
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-----------LEKT 300
+D+ ++L+K + D + YN ++ + +V L D + +
Sbjct: 201 CVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQH 260
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
C I R Y T+++ + K G HE A ++L G + N V+ G C+ +
Sbjct: 261 GCTPDI-RMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEK 319
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
AE +L ++ +K ++ ++ + G +R + ++ L G PD
Sbjct: 320 AEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE-----HGCMPDVITY 374
Query: 421 TSILSKLGDEGSVQD 435
T++++ EG + +
Sbjct: 375 TTVINGFCKEGLIDE 389
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 10/277 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y LL Y +A+ FR+M+ G + TY+ ++ LY K G+Y+ V D+ EM
Sbjct: 314 SYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEM 373
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K N PD +Y I I +G + + + +M + ++ + TY K L
Sbjct: 374 KVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEE-NVEPNMETYEGLIFACGKGGL 432
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A +L E+ Y +I + E L +++ Y +
Sbjct: 433 YEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNS 492
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+ A + G ++EAE +L SG D N VI + G Q EA+ + VE
Sbjct: 493 FIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGG--QYEEAV-KSYVEME 549
Query: 373 KATT-PN--SWAVVAAGYFDAG---KTERGFQCMKAA 403
KA PN + VV + Y AG ++E FQ +KA+
Sbjct: 550 KANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKAS 586
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 137/340 (40%), Gaps = 41/340 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LL + D+A FR M E GI TY+ ++ + K + EKV ++L EM
Sbjct: 244 TYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREM 303
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ PD SY + + +Y ++ + R+M++ V + +TY+ + Y K
Sbjct: 304 ESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAA-GCVANAATYSVLLNLYGKHGR 362
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW------DLEKT------ 300
D D+ + + D YN LI ++ G EV+ L+ ++E
Sbjct: 363 YDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEG 422
Query: 301 ---ACKR------------YIN--------RDYITMLEALMKLGEHEEAEKVLKEWELSG 337
AC + ++N + Y ++EA + +EEA V G
Sbjct: 423 LIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVG 482
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
++ N+ I + GL + AEAIL + E G +S+ V + G+ E
Sbjct: 483 SNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAV 542
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
+ V +E +P+ + +LS G V + E
Sbjct: 543 KSY-----VEMEKANCEPNELTLEVVLSVYCSAGLVDESE 577
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 103/484 (21%), Positives = 177/484 (36%), Gaps = 116/484 (23%)
Query: 58 NKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDH--AVQLDLIGRVHGFL 115
NK+ + + + ++ +R + ++L + +M R+ C P +H + + L+GR
Sbjct: 96 NKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWC--KPNEHIYTIMITLLGREGLLD 153
Query: 116 SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
F + + +T Y A++N Y R Q +L MK+ ++ S LTYN ++
Sbjct: 154 KCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVI 213
Query: 174 CLYSKTG-------------QYEKV-PDVLT----------------------EMKAKNI 197
++ G ++E + PDV+T M I
Sbjct: 214 NACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGI 273
Query: 198 FPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKAS 257
PD +Y + ++G + LE + +LREMES NL D S
Sbjct: 274 VPDINTYSYLVQTFGKLNRLEKVSELLREMES-------------------GGNLPDITS 314
Query: 258 DVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEAL 317
YN L+ YA LG+ E + ++ + A Y +L
Sbjct: 315 -----------------YNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLY 357
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
K G +++ + E ++S D N +I + G + + D+VE+ P
Sbjct: 358 GKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEEN--VEP 415
Query: 378 NSWAVVAAGYFDAGKTERG--FQCMKAALS-------VYVEGKGWKPDPKVITSILSKLG 428
N +T G F C K L +++ KG P K T ++ G
Sbjct: 416 NM------------ETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFG 463
Query: 429 DEGSVQDVEAFVAALRTVIPMNR-------QMYHAFIKANIRNG--KGVDELLDSMKADG 479
++ AL MN + Y++FI A R G K + +L M G
Sbjct: 464 QAALYEE------ALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESG 517
Query: 480 IDED 483
+ D
Sbjct: 518 LKRD 521
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 27/259 (10%)
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD--DEKTYQTYGALLNCYVRQR 145
MN KGI + V ++ G+ + A F+ + + T +TY + ++ + R
Sbjct: 443 MNEKGIVPSSKAYTGV-IEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGG 501
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
+A + +M E G+ ++N ++ + + GQYE+ EM+ N P+ +
Sbjct: 502 LYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLE 561
Query: 206 ICINSYGARSDLEGMEIILREMESQ---PHIV---LDWSTYASAAHFYIKANLID----- 254
+ ++ Y + ++ E +E+++ P ++ L + YA NLID
Sbjct: 562 VVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEMITM 621
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYITM 313
+ SD+ GIG + + N V ++D L C + R Y +
Sbjct: 622 RVSDI----------HQGIG-QMIKGDFDDESNWQIVEYVFDKLNSEGCGLGM-RFYNAL 669
Query: 314 LEALMKLGEHEEAEKVLKE 332
LEAL + + E A +VL E
Sbjct: 670 LEALWWMFQRERAARVLNE 688
>gi|168000535|ref|XP_001752971.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695670|gb|EDQ82012.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 161/407 (39%), Gaps = 49/407 (12%)
Query: 83 EVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNC 140
+V +W K P ++A + GR+ A F ++ +KT ++ AL++
Sbjct: 1 QVFNWKKSKLGWEANPKEYAKMISFAGRISQPQLAADLFDEMEKRGIKKTAVSFNALIHS 60
Query: 141 YVRQRQTDKALSHFRKMKEMGIALSTL-TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP 199
Y R + KAL F MK TL TYN ++ +YS+ G E++ + + K P
Sbjct: 61 YGRNNEAHKALQLFEDMKATNDCQPTLVTYNTLISMYSRMGATEEMKKLFLDCKEAGFSP 120
Query: 200 DNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
D +Y I Y L ME E+++ D TY + Y +AN ++K V
Sbjct: 121 DRHTYNALIWGYMRAGQLSQMEETFNELQA-GECKADVITYNAQIIGYARANAVNKMEAV 179
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
Q GI N ++ E+L +E +
Sbjct: 180 FSSM-----QAAGIPINAMVG---------EIL---------------------IEVYSR 204
Query: 320 LGEHEEAEKVLKEWELS-GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA-TTP 377
E+ E LK +++ G Y +R+ + VI Y + + EA + + + + ++P
Sbjct: 205 TKHFEKMENALKIMDVTPGVQYGSRVHSMVIESYADANKLDEMEAAISRMFQNKRMFSSP 264
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
S + Y AG+ R + M+ V+G GW + ++S+ G G + +E
Sbjct: 265 KSLHALIMAYSRAGEYGRLAKTMEV-----VKGAGWILQSSIYNILISEYGKGGHLDRME 319
Query: 438 -AFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGID 481
F + P + + + I A N VD +LD M+ G +
Sbjct: 320 QVFREMMDASCPPSFETFQYMIDAYEANNNEAEVDRILDLMRKAGCE 366
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 135/322 (41%), Gaps = 33/322 (10%)
Query: 77 RFSQ---ALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK---DDEKT 130
R SQ A ++ D M ++GI A +A+ + GR + A F ++K D + T
Sbjct: 28 RISQPQLAADLFDEMEKRGIKKTAVSFNAL-IHSYGRNNEAHKALQLFEDMKATNDCQPT 86
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
TY L++ Y R T++ F KE G + TYN ++ Y + GQ ++ +
Sbjct: 87 LVTYNTLISMYSRMGATEEMKKLFLDCKEAGFSPDRHTYNALIWGYMRAGQLSQMEETFN 146
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
E++A D +Y I Y + + ME + M++ I ++ Y +
Sbjct: 147 ELQAGECKADVITYNAQIIGYARANAVNKMEAVFSSMQA-AGIPINAMVGEILIEVYSRT 205
Query: 251 NLIDKASDVLKKAEERLEQKDGIGY-----NFLISLYASLGNKSEVLRLWDLEKTACKRY 305
+K + LK ++ G+ Y + +I YA + +L ++E + +
Sbjct: 206 KHFEKMENALKI----MDVTPGVQYGSRVHSMVIESYA------DANKLDEMEAAISRMF 255
Query: 306 INRDYITMLEALMKL-------GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
N+ + ++L L GE+ K ++ + +G + I N +I Y G +
Sbjct: 256 QNKRMFSSPKSLHALIMAYSRAGEYGRLAKTMEVVKGAGWILQSSIYNILISEYGKGGHL 315
Query: 359 QNAEAILEDLVEKGKATTPNSW 380
E + ++++ A+ P S+
Sbjct: 316 DRMEQVFREMMD---ASCPPSF 334
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 172/440 (39%), Gaps = 92/440 (20%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY +++ +++ L +++M + T+N ++ +K Q E+ +V
Sbjct: 64 TAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVF 123
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHF 246
+M N+ PD ++Y I I S G ++ + + M + QP++ TY S H
Sbjct: 124 GDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLF----TYHSVMHA 179
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLI--------------------------- 279
+ A +D+A D+ ++ ++ Q D + YN LI
Sbjct: 180 FGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVT 239
Query: 280 --SLYASLGNKSEVLRL-----------------------------------WDLEKTAC 302
SL +SLG K ++ L W L
Sbjct: 240 YNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMV 299
Query: 303 KRYINRDYITM---LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
I D +T+ L+ L K G E A ++ ++ + G + DT N +I G G +
Sbjct: 300 DNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLD 359
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKPDP 417
A A+L ++ E G A ++ + + Y GK + + AA +++E K G P+
Sbjct: 360 AAGALLLEMEENGCAPNIITYNTLISSY---GK----WSNLSAATRLFLEMKERGVAPNV 412
Query: 418 KVITSILSKLGDEGSVQDVEAFVAALRTV----IPMNRQMYHAFIKANIRNGK--GVDEL 471
+S++ G G +A ++ R + P N Y+ I IR G+ E
Sbjct: 413 VSYSSLIEGFGKAGR---TDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEY 469
Query: 472 LDSMKADGIDEDEETKEILV 491
L M+ G + TK +LV
Sbjct: 470 LREMRDAGCQMGKVTKSLLV 489
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++ L ++ +E+ M KG+ V +A+ ++ +G + + D+
Sbjct: 243 LLSSLGRKGDIQGLMELFGQMKAKGL-VSNELTYAILIERLGWAGRVEDVWQLYLEMVDN 301
Query: 128 EKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+ Y T +L+C + + + A F+ MK G+ T+TYN ++ + G+ +
Sbjct: 302 DIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAA 361
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYAS 242
+L EM+ P+ +Y I+SYG S+L + EM+ + P++V +Y+S
Sbjct: 362 GALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVV----SYSS 417
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTA 301
+ KA D A + ++ + + + YN LI G + L ++
Sbjct: 418 LIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAG 477
Query: 302 CK 303
C+
Sbjct: 478 CQ 479
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 143/350 (40%), Gaps = 19/350 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++NC + Q ++A +M + G T+N ++ + E+ D+ ++
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PD +++ I IN+ D + EM++ D TY +
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS-GCTPDEVTYNTLIDNLCSLGK 441
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYAS---LGNKSEVLRLWDLEKTACKRYINRD 309
+ KA D+LK E + I YN +I + EV DL+ I+R+
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG------ISRN 495
Query: 310 YI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
I T+++ L K + ++A +++ + G + N+++ YC G ++ A ILE
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ G ++ + G AG+T+ + ++ + KG +P PK +L
Sbjct: 556 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG-----MRIKGMRPTPKAYNPVLQS 610
Query: 427 LGDEGSVQDVEAFVAALRTVI-PMNRQMYHAFIKANIRNGKGVDELLDSM 475
L +++D + + V P + Y + R G + E D M
Sbjct: 611 LFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFM 660
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 138/343 (40%), Gaps = 44/343 (12%)
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
DE T+ T L+ +V + + AL +M EMG + + +T N ++ Y K G+ E
Sbjct: 215 DETTFTT---LMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 271
Query: 187 DVLTEMKAKNIFPDNFSY-----------------------------------RICINSY 211
+ + A PD +Y I +N
Sbjct: 272 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
LE + IL +M + + D +T+ + N +++A D+ ++ + D
Sbjct: 332 CKNGQLEEAKGILNQMVDR-GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
+N LI+ +G+ LRL++ K + Y T+++ L LG+ +A +LK
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+ E +G T N +I G C ++ AE + + + +G + ++ + G
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
K + F+ + +S +G +P+ SIL+ +G ++
Sbjct: 511 KIDDAFELINQMIS-----EGLQPNNITYNSILTHYCKQGDIK 548
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 120/299 (40%), Gaps = 11/299 (3%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKE--MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L+ Y Q+ D A+ + GI T+ YN ++ + + + + + V +EM
Sbjct: 114 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 173
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
A+ I PD ++ + + + I+L EM S+ + D +T+ + +++ I
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSR-GVAPDETTFTTLMQGFVEEGSI 232
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
+ A V + E + N LI+ Y LG + L E Y T
Sbjct: 233 EAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTF 292
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
+ L + A KV+ G+ D N V+ C NG ++ A+ IL +V++G
Sbjct: 293 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP---KVITSILSKLGD 429
++ + A + E L+ V KG PD ++ + L K+GD
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALD-----LARQVTVKGVSPDVYTFNILINALCKVGD 406
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 85/220 (38%), Gaps = 18/220 (8%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFS--NLK 125
+I +L + +AL++ M G C + + +D + + AE F +L+
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTG-CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+ T+ L++ + ++ D A +M G+ + +TYN I+ Y K G +K
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSY--GARSD-----LEGMEIILREMESQPHIVLDWS 238
D+L M A D +Y IN R+ L GM I + M P
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI--KGMRPTP------K 602
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
Y + N I A + ++ E E D + Y +
Sbjct: 603 AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIV 642
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 156/364 (42%), Gaps = 13/364 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ R D A++ M G+ +TYN ++ K +++K +V M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM 253
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ PD S+ I I + +++ +EM+ + ++ D +++ + +
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHR-YVTPDVVSFSCLIGLFSRRGE 312
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYI 311
+D A L++ + DG+ Y +I + G+ SE LR+ D + C + Y
Sbjct: 313 MDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDV-VTYN 371
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T+L L K +AEK+L E E G + D +I GYC G +NA + + L+
Sbjct: 372 TLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLR- 430
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
+ P+ VV G +G L + + P+ + ++ ++G
Sbjct: 431 -QRLRPD---VVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKG 486
Query: 432 SVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETK 487
V+D F+ + + +P N + Y++ IK R+G K + L M+ D + D T
Sbjct: 487 QVEDAFGFLDEMVKKGNLP-NIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITF 545
Query: 488 EILV 491
L+
Sbjct: 546 NTLI 549
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 98/479 (20%), Positives = 191/479 (39%), Gaps = 88/479 (18%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+D+ G K + +++ L K +RF +A EV M++ C AP
Sbjct: 215 VDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQ---CSVAP----------- 260
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+++ L+ + R + +A+ +++M+ + +++
Sbjct: 261 --------------------DVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSF 300
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY---GARSD---------- 216
+ ++ L+S+ G+ + L EMK + PD Y + I + G+ S+
Sbjct: 301 SCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVG 360
Query: 217 -------------LEGM---------EIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
L G+ E +L EME + + D T+ + H Y + +
Sbjct: 361 FGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEER-GVTPDLCTFTTLIHGYCRQGNFE 419
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT-- 312
A + + + D + YN LI G+ ++ LWD R I ++IT
Sbjct: 420 NALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWD---DMHAREILPNHITYS 476
Query: 313 -MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++++ + G+ E+A L E GN + R N++I GYC +G V+ + L+ + +
Sbjct: 477 ILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQD 536
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSILSKLGD 429
++ + GY K E M A +V+ +E + +PD I++ +
Sbjct: 537 NVFPDLITFNTLIHGYI---KEEN----MHGAFNVFNIMEKEMVRPDAVTYNMIINGFSE 589
Query: 430 EGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIR--NGKGVDELLDSMKADGIDEDEE 485
+G++QD F + I +R Y + I ++ N K +L D M G D++
Sbjct: 590 QGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDK 648
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 145/333 (43%), Gaps = 21/333 (6%)
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
T N ++ Y KT +++ V++EM+ + +FPD ++ + I++ D++ ++ M
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 228 ES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
+ +P IV TY S K DKA +V + ++ D +N LI +
Sbjct: 219 ANRGLKPGIV----TYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCR 274
Query: 285 LGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+G E ++ + K RY+ D ++ ++ + GE + A L+E + G D
Sbjct: 275 VGEVKEAVKFY---KEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPD 331
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
I VI G+C G + A + +++V G ++ + G K R K
Sbjct: 332 GVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLC---KQHRLLDAEK 388
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKA 460
L +E +G PD T+++ +G+ ++ ++ F LR + + Y++ I
Sbjct: 389 --LLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDG 446
Query: 461 NIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
R G +EL D M A I + T IL+
Sbjct: 447 MCRKGDLAKANELWDDMHAREILPNHITYSILI 479
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 156/368 (42%), Gaps = 20/368 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG L+ + DKA+ +M E GI + + Y+ ++ Y K+G++E V V EM
Sbjct: 152 TYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM 211
Query: 193 KAKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
K I PD Y I+S G G+ ++ +P++V TY + K
Sbjct: 212 SEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVV----TYNVLINCMCK 267
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ +A VLKK E+ D + YN LI + + E +W LE+ + I +
Sbjct: 268 EGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA--MWLLEEMVRGKNIVKP 325
Query: 310 YI----TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+ ++++ L +G +A +V E +G + N +I G V+ A ++
Sbjct: 326 NVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELM 385
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+++ G +++++ G+ + +R + + +G +P+ +L
Sbjct: 386 DEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST-----MRDRGIEPELFHYIPLLV 440
Query: 426 KLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
+ ++G ++ + P++ Y I + G K ELL S+ +G+ D
Sbjct: 441 AMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPD 500
Query: 484 EETKEILV 491
T I++
Sbjct: 501 AVTYSIVI 508
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 141/325 (43%), Gaps = 19/325 (5%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E TY L+NC ++ +A+ +KM E G+A +TYN ++ S + ++
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311
Query: 188 VLTEM-KAKNIF-PDNFSYRICINSYGARSDLEGME--IILREMESQPHIVLDWSTYASA 243
+L EM + KNI P+ ++ I D+ M +R M + +++ TY
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGL---CDIGRMRQAFQVRAMMEETGCMVNLVTYNLL 368
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
++ + + KA +++ + + D Y+ LI + + +V R DL T
Sbjct: 369 IGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMW---QVDRAEDLLSTMRD 425
Query: 304 RYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
R I + YI +L A+ + G E A + E + + D + +I G C G ++
Sbjct: 426 RGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKT 484
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
A+ +L+ +V++G ++++V + +G E +K + G+ PD V
Sbjct: 485 AKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLK-----QMTASGFLPDVAVF 539
Query: 421 TSILSKLGDEGSVQDVEAFVAALRT 445
S++ +G + V + + T
Sbjct: 540 DSLIQGYSTKGEINKVLELIREMIT 564
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 102/242 (42%), Gaps = 37/242 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ +R + KA+ +M +G+ + TY+ ++ + K Q ++ D+L+ M
Sbjct: 364 TYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM 423
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + I P+ F Y + + + +E + EM++ + LD Y++ H KA
Sbjct: 424 RDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN--NFPLDVVAYSTMIHGACKAGD 481
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A ++LK + D + Y+ +I+++A
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFA----------------------------- 512
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
K G+ E A VLK+ SG D + +++I GY G + ++ +++ K
Sbjct: 513 ------KSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKN 566
Query: 373 KA 374
A
Sbjct: 567 IA 568
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 87/228 (38%), Gaps = 11/228 (4%)
Query: 270 KDGIGYNFLISLYASLGNKSE---VLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+D + YN +++ G+ +LR LE R Y ++ AL ++A
Sbjct: 75 RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
+L+ +G D +I G C+ V A ++ ++ E G ++ + G
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV-AALRT 445
Y +G+ E + V + KG +PD + T ++ L G + + +R
Sbjct: 195 YCKSGRWED-----VGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249
Query: 446 VIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
+ N Y+ I + G K +L M G+ D T L+
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 143/350 (40%), Gaps = 19/350 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++NC + Q ++A +M + G T+N ++ + E+ D+ ++
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PD +++ I IN+ D + EM++ D TY +
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS-GCTPDEVTYNTLIDNLCSLGK 441
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYAS---LGNKSEVLRLWDLEKTACKRYINRD 309
+ KA D+LK E + I YN +I + EV DL+ I+R+
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG------ISRN 495
Query: 310 YI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
I T+++ L K + ++A +++ + G + N+++ YC G ++ A ILE
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ G ++ + G AG+T+ + ++ + KG +P PK +L
Sbjct: 556 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG-----MRIKGMRPTPKAYNPVLQS 610
Query: 427 LGDEGSVQDVEAFVAALRTVI-PMNRQMYHAFIKANIRNGKGVDELLDSM 475
L +++D + + V P + Y + R G + E D M
Sbjct: 611 LFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFM 660
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 138/343 (40%), Gaps = 44/343 (12%)
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
DE T+ T L+ +V + + AL +M EMG + + +T N ++ Y K G+ E
Sbjct: 215 DETTFTT---LMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 271
Query: 187 DVLTEMKAKNIFPDNFSY-----------------------------------RICINSY 211
+ + A PD +Y I +N
Sbjct: 272 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 331
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
LE + IL +M + + D +T+ + N +++A D+ ++ + D
Sbjct: 332 CKNGQLEEAKGILNQMVDR-GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
+N LI+ +G+ LRL++ K + Y T+++ L LG+ +A +LK
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+ E +G T N +I G C ++ AE + + + +G + ++ + G
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
K + F+ + +S +G +P+ SIL+ +G ++
Sbjct: 511 KIDDAFELINQMIS-----EGLQPNNITYNSILTHYCKQGDIK 548
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 120/299 (40%), Gaps = 11/299 (3%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKE--MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L+ Y Q+ D A+ + GI T+ YN ++ + + + + + V +EM
Sbjct: 114 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 173
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
A+ I PD ++ + + + ++L EM S+ + D +T+ + +++ I
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSR-GVAPDETTFTTLMQGFVEEGSI 232
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
+ A V + E + N LI+ Y LG + L E Y T
Sbjct: 233 EAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTF 292
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
+ L + A KV+ G+ D N V+ C NG ++ A+ IL +V++G
Sbjct: 293 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP---KVITSILSKLGD 429
++ + A + E L+ V KG PD ++ + L K+GD
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALD-----LARQVTVKGVSPDVYTFNILINALCKVGD 406
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 85/220 (38%), Gaps = 18/220 (8%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFS--NLK 125
+I +L + +AL++ M G C + + +D + + AE F +L+
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTG-CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+ T+ L++ + ++ D A +M G+ + +TYN I+ Y K G +K
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSY--GARSD-----LEGMEIILREMESQPHIVLDWS 238
D+L M A D +Y IN R+ L GM I + M P
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI--KGMRPTP------K 602
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
Y + N I A + ++ E E D + Y +
Sbjct: 603 AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIV 642
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 177/404 (43%), Gaps = 16/404 (3%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L + R S+A+ + D M KG C + + ++ + + A S ++
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG 250
Query: 128 --EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
E Y +++ + + AL+ F +M GI + +TYN ++ G++
Sbjct: 251 KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 310
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
+L++M + I P+ ++ I+++ L E + EM + I D TY+S +
Sbjct: 311 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLIN 369
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
+ + +D+A + + + + + YN LI + E + L+ + +R
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF---REMSQRG 426
Query: 306 I---NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+ Y T++ + E + A+ V K+ G D + ++ G CNNG V+ A
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
+ E L ++ ++ G AGK E G+ + +LS+ KG KP+ T+
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD-LFCSLSL----KGVKPNVVTYTT 541
Query: 423 ILSKLGDEGSVQDVEAFVAALRTVIPM-NRQMYHAFIKANIRNG 465
++S +G ++ +A ++ P+ + Y+ I+A++R+G
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 130/310 (41%), Gaps = 48/310 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLY----------SKTGQY 182
TY L+NC+ R+ Q AL+ KM ++G +T N ++ + S GQ
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 183 EKV---PDVLT----------------------EMKAKNIFPDNFSYRICINSYGARSDL 217
++ PD T M K PD +Y I +N R D+
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 218 EGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
+ +L++ME +P +V+ ++T A Y N A ++ + + + + + +
Sbjct: 238 DLALSLLKKMEQGKIEPGVVI-YNTIIDALCNYKNVN---DALNLFTEMDNKGIRPNVVT 293
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLK 331
YN LI + G S+ RL +R IN + +T +++A +K G+ EAEK+
Sbjct: 294 YNSLIRCLCNYGRWSDASRLL---SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
E D +++I G+C + + A+ + E ++ K ++ + G+ A
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 392 KTERGFQCMK 401
+ + G + +
Sbjct: 411 RVDEGMELFR 420
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/283 (18%), Positives = 119/283 (42%), Gaps = 19/283 (6%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+D +VK G V E +++ ++ KR S +N G C+ D A +
Sbjct: 333 IDAFVKEGKLV---EAEKLYDEMIKRSIDPDIFTYSSLIN--GFCMHDRLDEAKHM---- 383
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+ ++ F N+ TY L+ + + ++ D+ + FR+M + G+ +T+TY
Sbjct: 384 --FELMISKDCFPNV-------VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
++ + + + + V +M + + PD +Y I ++ +E ++ ++
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ- 493
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + D TY KA ++ D+ + + + + Y ++S + G K
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
E L+ K + Y T++ A ++ G+ + ++++E
Sbjct: 554 EADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 596
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 111/263 (42%), Gaps = 9/263 (3%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ LL+ + + D +S +M+ +GI+ + TY+ ++ + + Q VL +M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 194 AKNIFPDNFSYRICINSY--GAR-SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
PD + +N + G R SD + + EM QP D T+ + H +
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP----DSFTFNTLIHGLFRH 199
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRD 309
N +A ++ + + Q D + Y +++ G+ L L +E+ + +
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV-VI 258
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+++AL +A + E + G + N++I CN G +A +L D++
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 370 EKGKATTPNSWAVVAAGYFDAGK 392
E+ +++ + + GK
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGK 341
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 9/231 (3%)
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
+ D A++ F M + S + ++ ++ +K +++ V + +M+ I + ++Y
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 206 ICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
I IN + RS L +L +M +P IV T S + + N I A ++ +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIV----TLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKLG 321
E Q D +N LI SE + L D + C+ + Y ++ L K G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL-VTYGIVVNGLCKRG 235
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+ + A +LK+ E I N +I CN V +A + ++ KG
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 134/319 (42%), Gaps = 12/319 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ Y R D+A++ +R+M + G+ TYN ++ ++ G +E+ VL EM
Sbjct: 503 TFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEM 562
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
K P+ +Y +++Y ++E M + E+ S +P VL + Y K
Sbjct: 563 KDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVL----LKTLVLVYSK 618
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
++L+ + + E+ D N ++S+Y S+ + + K +
Sbjct: 619 SDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTT 678
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ + E++E +L+E G D N VI YC NG ++ A I ++
Sbjct: 679 YNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK 738
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+ G A ++ A Y +K Y+ G KP+ S++
Sbjct: 739 DFGLAPDVITYNTFIASYASDSMFIEAIDVVK-----YMIKNGCKPNQNTYNSLIDWFCK 793
Query: 430 EGSVQDVEAFVAALRTVIP 448
+ +F++ LR + P
Sbjct: 794 LNRRDEASSFISNLRNLDP 812
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 147/352 (41%), Gaps = 25/352 (7%)
Query: 130 TYQTYGALLNCYVRQRQT-DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
T TY +LN Y + K MK G+A TYN ++ + YE+ +V
Sbjct: 254 TLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEV 313
Query: 189 LTEMKAKNIFPDNFSYRICINSYG-ARSDLEGMEIILREMESQ---PHIVLDWSTYASAA 244
EMKA PD +Y ++ YG +R E ME +L+EME+ P IV TY S
Sbjct: 314 FEEMKAAGFSPDKVTYNALLDVYGKSRRPREAME-VLKEMEASGFAPSIV----TYNSLI 368
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA-CK 303
Y + L+D+A ++ + ++ + D Y L+S + G +++++ + A C+
Sbjct: 369 SAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQ 428
Query: 304 RYINRDYITMLEALMKL----GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
I AL+K+ G E KV +E ++ D N ++ + NG+
Sbjct: 429 -----PNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDS 483
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
+ +++ G +++ + + Y G ++ + L G PD
Sbjct: 484 EVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDA-----GVTPDLST 538
Query: 420 ITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDEL 471
++L+ L G + E +A ++ ++ + + NGK V+ +
Sbjct: 539 YNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERM 590
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 10/273 (3%)
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYG--ALLNCYVRQRQTDKALSHFRKMKE 159
AV + ++G+ A S +L++D Y +L+ Y + +A+ F+K++E
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248
Query: 160 MGIALSTLTYNDIMCLYSKTGQ-YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
G + +TYN I+ +Y K G + K+ ++ MK+ + PD ++Y I+S S E
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYE 308
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+ EM++ D TY + Y K+ +A +VLK+ E + YN L
Sbjct: 309 EAAEVFEEMKAA-GFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSL 367
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWEL 335
IS YA G E + +L+ K+ I D Y T+L K G+ + A KV +E +
Sbjct: 368 ISAYARDGLLDEAM---ELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV 424
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
+G + NA+I + N G + E++
Sbjct: 425 AGCQPNICTFNALIKMHGNRGNFVEMMKVFEEI 457
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 12/310 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ R ++A F +MK G + +TYN ++ +Y K+ + + +VL EM
Sbjct: 293 TYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEM 352
Query: 193 KAKNIFPDNFSYRICINSYGARSDL--EGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+A P +Y I++Y AR L E ME L+ + I D TY + + K
Sbjct: 353 EASGFAPSIVTYNSLISAY-ARDGLLDEAME--LKSQMVKKGIKPDVFTYTTLLSGFEKT 409
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-RD 309
D A V ++ Q + +N LI ++ + GN E++++++ E C+ +
Sbjct: 410 GKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFE-EIKICECVPDIVT 468
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ T+L + G E V KE + +G + N +I Y G A AI ++
Sbjct: 469 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRML 528
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+ G +++ V A G E+ + L+ +G+ KP+ S+L +
Sbjct: 529 DAGVTPDLSTYNAVLAALARGGLWEQS----EKVLAEMKDGR-CKPNELTYCSLLHAYAN 583
Query: 430 EGSVQDVEAF 439
V+ + A
Sbjct: 584 GKEVERMSAL 593
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 171/417 (41%), Gaps = 50/417 (11%)
Query: 78 FSQALEVSDWMNRKGICVFAPCDH--AVQLDLIGRVHG-FLSAESYFSNLKDDEKTYQTY 134
+ +ALEV +W+N + ++P A L ++G+ + L+ E + T Q Y
Sbjct: 168 WQRALEVYEWLNLRHW--YSPNARMLATILSVLGKANQEALAVEIFARAEAASGNTVQVY 225
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY--EKVPDVLTEM 192
A++ Y R + K M+ G +++N ++ K+G ++L E+
Sbjct: 226 NAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEV 285
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+ I PD +Y I++ S+LE + +M QP D TY + Y +
Sbjct: 286 RRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQP----DLWTYNAMISVYGR 341
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ +A + K E + D + YN L+ +A GN +V + + K +D
Sbjct: 342 CGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICE---DMVKMGFGKD 398
Query: 310 ---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y T++ K G+H+ A ++ + +LSG S D +I +++ A ++
Sbjct: 399 EMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMS 458
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGK---TERGFQCM--------KAALSVYVE------ 409
+++ T +++ + GY AGK E F CM A SV ++
Sbjct: 459 EMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFN 518
Query: 410 --GKG-----------WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQM 453
GK +KPD + +L LG E +DV V + + MN Q+
Sbjct: 519 ESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQV 575
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 144/373 (38%), Gaps = 48/373 (12%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A + F+ + D T + L+ + + D+ +++++MG +S + ++
Sbjct: 801 ARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLD 860
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
++ G +V + MKA FP YRI I + +E ++ EME
Sbjct: 861 AFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEV-ARFK 919
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
D S + S Y K V + +E + D YN LI +Y E L L
Sbjct: 920 PDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSL 979
Query: 295 W-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
++ + + ++ Y +++ A KL E+AE++ + D + ++ +
Sbjct: 980 MHEMRRVGLEPKLD-TYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFR 1038
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
N+G AE +L + E G T + ++ Y +G+
Sbjct: 1039 NSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQ--------------------- 1077
Query: 414 KPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK---GVDE 470
P+ +L L EG +P++ Y + I A ++NG + +
Sbjct: 1078 ---PEEAEKVLDNLKVEG---------------LPLSTLPYSSVIDAYLKNGDHNVAIQK 1119
Query: 471 LLDSMKADGIDED 483
L++ MK DG++ D
Sbjct: 1120 LME-MKKDGLEPD 1131
>gi|255661132|gb|ACU25735.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 426
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 180/413 (43%), Gaps = 31/413 (7%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRV-GEL---QRIIRDLRKRKRFSQALE 83
++ T ++I+ G G + L +W++ + RV G+L +I RK +S+A+
Sbjct: 8 DRYTYSTLITHFGKEGL-FDAAL-SWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 84 VSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT--YGALLN 139
+ + R G F P + +++ G+ F A S S ++ T T Y LL
Sbjct: 66 IFSRLKRSG---FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 140 CYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP 199
YV R+ +ALS F +M+E+ L T N ++ +Y + G ++ + M+ I P
Sbjct: 123 MYVENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 200 DNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
+ SY + YG ++L G I L + + +I + TY S Y K +KA+++
Sbjct: 183 NVVSYNTLLRVYGD-AELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
+++ + R + + I Y+ +IS++ +G L+ +++ Y TM+ A +
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYER 301
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG-YCNNGLVQNAEAILEDLVEKGKATTPN 378
G A+++L E + N IP + I G ++ A + ++ G+
Sbjct: 302 AGLVAHAKRLLHELKRPDN-----IPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDIX 356
Query: 379 SWAVVA---AGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
+ + + Y G F M+ G G+ PD VI IL+ G
Sbjct: 357 VFERMIHLFSKYKKYGNVVEVFDKMR--------GLGYFPDSNVIALILNAYG 401
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 160/371 (43%), Gaps = 33/371 (8%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ Y R+ A M++ G+ L YN ++ + + G+ E + +MK
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIKA 250
K + P +Y I I YG + + + IL+EME + P++V +Y + + K
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV----SYGTLINCLCKG 507
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD- 309
+ + +A V + E+R YN LI S G + R K K+ I +
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR---FSKEMLKKGIELNL 564
Query: 310 --YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+++ L G+ EAE +L E G D N++I GY G VQ A+ E+
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624
Query: 368 LVEKGKATTPNSWAVVAAGYFDAG--KTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+ G T ++ ++ + G TER F M KPD V +L
Sbjct: 625 MKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEM-----------SLKPDLLVYNGVLH 673
Query: 426 KLGDEGSVQDVEAFVAALRTV---IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGI 480
G ++ +AF + + I +++ Y++ I ++ GK V L+D M A +
Sbjct: 674 CYAVHGDME--KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREM 731
Query: 481 DEDEETKEILV 491
+ + +T I+V
Sbjct: 732 EPEADTYNIIV 742
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 152/356 (42%), Gaps = 13/356 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y + +K+ +MK I S +T+N ++ K G E +VL EM
Sbjct: 251 TYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM 310
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD F++ I + Y + E + + E + ++ T + + K
Sbjct: 311 KDLGFVPDAFTFSILFDGYSSNEKAEA-ALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN-KSEVLRLWDLEKTACKRYINRDYI 311
I+KA ++L + + + + YN +I Y G+ +++ +EK K + Y
Sbjct: 370 IEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPD-HLAYN 428
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++ +LGE E AEK + + +L G S N +I GY IL+++ +
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN 488
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY-VEGKGWKPDPKVITSILSKLGDE 430
G T PN VV+ G +G + ++A + +E +G P ++ ++ +
Sbjct: 489 G--TMPN---VVSYGTL-INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSK 542
Query: 431 GSVQDVEAFVA-ALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
G ++D F L+ I +N Y+ I GK ++LL + G+ D
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 170/414 (41%), Gaps = 24/414 (5%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDH-AVQLDLIGRVHGFLSAESYFSNL--KDDE 128
L + K S+A ++ + +GI + D + LD + + F + F N+ D
Sbjct: 119 LNESKMISEAADLFFALRNEGI--YPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFR 176
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
+ YG + V+ K L F +MK I S YN ++ K + +
Sbjct: 177 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL 236
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
EM A+ + P +Y I+ Y + E +RE HI T+ +
Sbjct: 237 FDEMLARRLLPSLITYNTLIDGYCKAGNPEK-SFKVRERMKADHIEPSLITFNTLLKGLF 295
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
KA +++ A +VLK+ ++ D ++ L Y+S L +++ TA +
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE---TAVDSGVKM 352
Query: 309 DYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+ T +L AL K G+ E+AE++L G + I N +I GYC G + A +
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTE-----------RGFQCMKAALSVYVEGKGWK 414
E + ++G ++ + + + G+ E +G ++ + G G K
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK 472
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGV 468
+ IL ++ D G++ +V ++ + + ++ + +K ++ + +GV
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED-RGV 525
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 114/269 (42%), Gaps = 5/269 (1%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
LK + +TY L+ Y R+ + DK ++M++ G + ++Y ++ K +
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+ V +M+ + + P Y + I+ ++ +E +EM + I L+ TY +
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM-LKKGIELNLVTYNTL 570
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
+ +A D+L + + + D YN LIS Y GN + L++ K +
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ + Y ++ K G E E++ E L D + N V+ Y +G ++ A
Sbjct: 631 KPTLKTYHLLISLCTKEG-IELTERLFGEMSLKP---DLLVYNGVLHCYAVHGDMEKAFN 686
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
+ + ++EK ++ + G GK
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGK 715
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 108/244 (44%), Gaps = 11/244 (4%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ Y L++ + + + A ++M + GI L+ +TYN ++ S TG+ + D+L E
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
+ K + PD F+Y I+ YG +++ + EM+ + I TY H I
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK-RSGIKPTLKTY----HLLISLC 644
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-- 309
+ + E + D + YN ++ YA G+ + ++L+K ++ I D
Sbjct: 645 TKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDME---KAFNLQKQMIEKSIGLDKT 701
Query: 310 -YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y +++ +K+G+ E ++ E + N ++ G+C +A ++
Sbjct: 702 TYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREM 761
Query: 369 VEKG 372
EKG
Sbjct: 762 QEKG 765
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 143/350 (40%), Gaps = 19/350 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++NC + Q ++A +M + G T+N ++ + E+ D+ ++
Sbjct: 231 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 290
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PD +++ I IN+ D + EM++ D TY +
Sbjct: 291 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS-GCTPDEVTYNTLIDNLCSLGK 349
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYAS---LGNKSEVLRLWDLEKTACKRYINRD 309
+ KA D+LK E + I YN +I + EV DL+ I+R+
Sbjct: 350 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG------ISRN 403
Query: 310 YI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
I T+++ L K + ++A +++ + G + N+++ YC G ++ A ILE
Sbjct: 404 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 463
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ G ++ + G AG+T+ + ++ + KG +P PK +L
Sbjct: 464 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG-----MRIKGMRPTPKAYNPVLQS 518
Query: 427 LGDEGSVQDVEAFVAALRTVI-PMNRQMYHAFIKANIRNGKGVDELLDSM 475
L +++D + + V P + Y + R G + E D M
Sbjct: 519 LFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFM 568
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 138/343 (40%), Gaps = 44/343 (12%)
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
DE T+ T L+ +V + + AL +M EMG + + +T N ++ Y K G+ E
Sbjct: 123 DETTFTT---LMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 179
Query: 187 DVLTEMKAKNIFPDNFSY-----------------------------------RICINSY 211
+ + A PD +Y I +N
Sbjct: 180 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 239
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
LE + IL +M + + D +T+ + N +++A D+ ++ + D
Sbjct: 240 CKNGQLEEAKGILNQMVDR-GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 298
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
+N LI+ +G+ LRL++ K + Y T+++ L LG+ +A +LK
Sbjct: 299 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 358
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+ E +G T N +I G C ++ AE + + + +G + ++ + G
Sbjct: 359 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 418
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
K + F+ + +S +G +P+ SIL+ +G ++
Sbjct: 419 KIDDAFELINQMIS-----EGLQPNNITYNSILTHYCKQGDIK 456
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 120/299 (40%), Gaps = 11/299 (3%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKE--MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L+ Y Q+ D A+ + GI T+ YN ++ + + + + + V +EM
Sbjct: 22 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 81
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
A+ I PD ++ + + + ++L EM S+ + D +T+ + +++ I
Sbjct: 82 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSR-GVAPDETTFTTLMQGFVEEGSI 140
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
+ A V + E + N LI+ Y LG + L E Y T
Sbjct: 141 EAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTF 200
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
+ L + A KV+ G+ D N V+ C NG ++ A+ IL +V++G
Sbjct: 201 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 260
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP---KVITSILSKLGD 429
++ + A + E L+ V KG PD ++ + L K+GD
Sbjct: 261 LPDITTFNTLIAALCTGNRLEEALD-----LARQVTVKGVSPDVYTFNILINALCKVGD 314
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 85/220 (38%), Gaps = 18/220 (8%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFS--NLK 125
+I +L + +AL++ M G C + + +D + + AE F +L+
Sbjct: 340 LIDNLCSLGKLGKALDLLKDMESTG-CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 398
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+ T+ L++ + ++ D A +M G+ + +TYN I+ Y K G +K
Sbjct: 399 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 458
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSY--GARSD-----LEGMEIILREMESQPHIVLDWS 238
D+L M A D +Y IN R+ L GM I + M P
Sbjct: 459 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI--KGMRPTP------K 510
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
Y + N I A + ++ E E D + Y +
Sbjct: 511 AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIV 550
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 159/369 (43%), Gaps = 20/369 (5%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+T G L+ + + +A R+ E G+ +N ++ + K + +V +++
Sbjct: 228 ETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHT 287
Query: 192 MKAKNIFPDNFSYRICINSYGAR-SDLEGMEII--LREMESQPHIVLDWSTYASAAHFYI 248
M KN PD F+Y+ IN + L+ E+ L++ P +V+ Y + H +
Sbjct: 288 MIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVM----YTTLIHGFC 343
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K ++ AS + + ++ + YN LI + +GN E ++L+ + +
Sbjct: 344 KMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTL 403
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
T++ L G +EA +E D N +I G+C G V + +L++L
Sbjct: 404 SCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKEL 463
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
KG + +S+A + G + + + +G +P I+S L
Sbjct: 464 QAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWND-----MHNRGLQPMVCTRDHIISGLC 518
Query: 429 DEG-SVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETK 487
++G V+ +E + L++ + ++ ++ I++ I+ GK ELL +K D + +K
Sbjct: 519 EQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIGK---ELLLELKMDS----KTSK 571
Query: 488 EILVCTMEK 496
E+ M K
Sbjct: 572 EVYPLAMTK 580
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 30/192 (15%)
Query: 54 VKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHG 113
VKN N + Q II K QA EV + + +G +AP D + LI HG
Sbjct: 290 VKNRNP-DIFTYQEIINGFCKNWMTLQAFEVFNALKDRG---YAP-DMVMYTTLI---HG 341
Query: 114 FLSAESYFSNLKDDEKTY------------QTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
F L+D K + +Y L+ + + D+A+ ++KM + G
Sbjct: 342 FCK----MGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSG 397
Query: 162 IALSTLTYNDI---MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
+TL+ N + +CL+ +T ++ D EM KNI D +Y I + +
Sbjct: 398 YKETTLSCNTLILGLCLHGRT---DEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVL 454
Query: 219 GMEIILREMESQ 230
+L+E++++
Sbjct: 455 QSTDLLKELQAK 466
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 147/374 (39%), Gaps = 49/374 (13%)
Query: 117 AESYFSNLKDDEKTYQTYGALLNCYVRQRQTDK--------------------------- 149
AE F + T Q + A++ Y R + D
Sbjct: 207 AEDVFLRFAREGATVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINAR 266
Query: 150 ----------ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP 199
AL ++++ G+ +TYN ++ S+ + V EM A P
Sbjct: 267 AKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRP 326
Query: 200 DNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKA 256
D ++Y ++ +G + E++ +E+ QP D TY S + + K +++
Sbjct: 327 DLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQP----DAVTYNSLLYAFAKEGDVERV 382
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
V ++ + +KDGI YN +I +Y +G L L+D + Y ++++
Sbjct: 383 ERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDS 442
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
L K+ EA KVL+E +G +A+I Y +G +AE + +VE G
Sbjct: 443 LGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPD 502
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV 436
++ V+ + + +T + +A + G+KPD + +L+ L ++
Sbjct: 503 RLAYLVMLDVFARSDETRKLMVLYRAMIK-----DGYKPDDGLYQVLLAALAKGNEHDEI 557
Query: 437 EAFVAALRTVIPMN 450
E + + V MN
Sbjct: 558 EGVIQDMEAVFEMN 571
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 163/404 (40%), Gaps = 34/404 (8%)
Query: 114 FLSAESYFSNLKDDEKTYQ------------TYGALLNCYVRQRQTDKALSHFRKMKEMG 161
+SA S SNL D ++ TY A+++ + R + +A F+++ E G
Sbjct: 299 LISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKG 358
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG--ARSDLE- 218
+TYN ++ ++K G E+V V E+ D +Y I+ YG R DL
Sbjct: 359 FQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLAL 418
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
G+ +R + P D TY K + I +A VL++ + + + ++ L
Sbjct: 419 GLYDEMRAIGCTP----DAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSAL 474
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
I YA G + + R +D + + Y+ ML+ + E + + + G
Sbjct: 475 ICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGY 534
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
D + ++ E +++D+ +A + V+++ A +G
Sbjct: 535 KPDDGLYQVLLAALAKGNEHDEIEGVIQDM----EAVFEMNPLVISSILIKAECISQGAS 590
Query: 399 CMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMY-HAF 457
+K A +G++PD K + SIL G + + + +R +P + +
Sbjct: 591 LLKRACL-----QGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECS 645
Query: 458 IKANIRNGKGVDELLD-----SMKADGIDEDEETKEILVCTMEK 496
I +NGK VD + + +K +D + E L+ +E+
Sbjct: 646 IMLLCKNGKIVDAIQEYSRKQMLKRGSFGQDCDLYEYLITYLEE 689
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 10/221 (4%)
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
++ +A G+ EV+++++ K A Y M+ L + E ++ E E +
Sbjct: 857 LMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGA 916
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G D + N +++ Y G + ++E G +++ + Y + E G
Sbjct: 917 GFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEG 976
Query: 397 FQCMKAALSVYVEGK-GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMY 454
F + Y GK G P + +L+ G + + +RT +NR +Y
Sbjct: 977 FTLL------YEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIY 1030
Query: 455 HAFIKA--NIRNGKGVDELLDSMKADGIDEDEETKEILVCT 493
H +K N RN + LL +MK DGI+ T IL+ +
Sbjct: 1031 HMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTS 1071
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 1/183 (0%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL Y D+ + + + E G+ TYN ++ +YS+ + E+ +L EM +
Sbjct: 928 LLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRG 987
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ P SY+I + + G E +++ EM ++ + L+ S Y Y A KA
Sbjct: 988 LTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGY-RLNRSIYHMMMKIYRNARNHSKA 1046
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
+L +E + + L++ Y + G+ E ++ + K++ Y T+L+A
Sbjct: 1047 EHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDA 1106
Query: 317 LMK 319
++
Sbjct: 1107 YLR 1109
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 115/284 (40%), Gaps = 9/284 (3%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T ++ ++ + + D+ ++++++ I +S T ++ ++K G +V +
Sbjct: 816 TVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIY 875
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHF 246
MKA P+ YRI I+ +E+++ EME +P +V+ +
Sbjct: 876 NGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVV----LNTLLLM 931
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTACKRY 305
Y D+ +V E + D YN LI +Y+ E L+++ K
Sbjct: 932 YTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPK 991
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+ Y +L A K E+A+ + +E G + I + ++ Y N AE +L
Sbjct: 992 LE-SYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLL 1050
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
+ E G T + ++ Y +G + + + + S +E
Sbjct: 1051 SAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLE 1094
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+ M+EA KL ++AE +K + + D RI NA+I Y +GL ++A AI + +++
Sbjct: 752 VAMIEAYGKLKLWQQAENFVKGLK-QESGVDRRIWNALIHAYAESGLYEHARAIFDIMIK 810
Query: 371 KGKATTPNS 379
KG T S
Sbjct: 811 KGPLPTVES 819
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 173/417 (41%), Gaps = 50/417 (11%)
Query: 78 FSQALEVSDWMNRKGICVFAPCDH--AVQLDLIGRVHG-FLSAESYFSNLKDDEKTYQTY 134
+ +ALEV +W+N + ++P A L ++G+ + L+ E + T Q Y
Sbjct: 143 WQRALEVYEWLNLRHW--YSPNARMLATILSVLGKANQEALAVEIFARAEAASGNTVQVY 200
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY--EKVPDVLTEM 192
A++ Y R + K M+ G +++N ++ K+G ++L E+
Sbjct: 201 NAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEV 260
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+ I PD +Y I++ S+LE + +M QP D TY + Y +
Sbjct: 261 RRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQP----DLWTYNAMISVYGR 316
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ +A + K E + D + YN L+ +A GN V ++ ++ + K +D
Sbjct: 317 CGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGN---VDKVKEICEDMVKMGFGKD 373
Query: 310 ---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y T++ K G+H+ A ++ + +LSG S D +I +++ A ++
Sbjct: 374 EMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMS 433
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGK---TERGFQCM--------KAALSVYVE------ 409
+++ T +++ + GY AGK E F CM A SV ++
Sbjct: 434 EMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFN 493
Query: 410 --GKG-----------WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQM 453
GK +KPD + +L LG E +DV V + + MN Q+
Sbjct: 494 ESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQV 550
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/384 (20%), Positives = 154/384 (40%), Gaps = 42/384 (10%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +LL + R+ DK M +MG +TYN I+ +Y K GQ++ + ++M
Sbjct: 341 TYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDM 400
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD +Y + I+S G + ++ ++ EM + + T+++ Y KA
Sbjct: 401 KLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNA-RVKPTLRTFSALICGYAKAGK 459
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+A + + D + Y+ ++ + + ++L+ + + Y
Sbjct: 460 RVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEV 519
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC------------------- 353
ML L K E+ KV+K+ E I + ++ G C
Sbjct: 520 MLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLAISQGCELD 579
Query: 354 ------NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG---KTERGFQCMKAAL 404
+ GL E + E L+ K + + ++ + ++G K E+ MK A
Sbjct: 580 QYGKARDFGLFCGTEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEA- 638
Query: 405 SVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIR 463
G +P + ++ G ++ E + L+ +P++ Y + I A ++
Sbjct: 639 -------GVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLK 691
Query: 464 NGK---GVDELLDSMKADGIDEDE 484
NG + +L++ MK DG++ D
Sbjct: 692 NGDHNVAIQKLME-MKKDGLEPDH 714
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 176/398 (44%), Gaps = 32/398 (8%)
Query: 23 YTNRINKTTLYSIISPLGNPG--TRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQ 80
+ + +N + + II+ LG G + L+N K+G + V +I R+
Sbjct: 176 FESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRD 235
Query: 81 ALEVSDWMNRKGICVFAPCDHAVQLDLIGR-----------VHGFLSAESYFSNLKDDEK 129
A+ V M +G C + V L++ G+ VHG S S + D+
Sbjct: 236 AVLVFKKMEEEG-CKPTLITYNVILNVYGKMGMPWSKISGLVHGMKS-----SGVAPDDY 289
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
TY T L++C R ++A F +MK G + +T+N ++ +Y K+ + ++ +VL
Sbjct: 290 TYNT---LISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVL 346
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDL--EGMEIILREMESQPHIVLDWSTYASAAHFY 247
EM+ P +Y I++Y AR L E ME L++ + I D TY + +
Sbjct: 347 KEMEFSGFSPSIVTYNSLISAY-ARDGLLREAME--LKDQMVEKGIKPDVFTYTTLLSGF 403
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYI 306
KA + + A + + + + +N LI ++ + G +E+++++ ++E C I
Sbjct: 404 EKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDI 463
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+ T+L + G E V KE + +G + N +I Y G Q A A+ +
Sbjct: 464 -VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYK 522
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAG---KTERGFQCMK 401
++E G +S+ V A G ++E+ F MK
Sbjct: 523 RMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMK 560
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 171/439 (38%), Gaps = 47/439 (10%)
Query: 30 TTLYSIISPLG--NPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDW 87
TTL S G P RI E+ G K + +I+ R RF++ ++V +
Sbjct: 397 TTLLSGFEKAGMDEPAMRIFGEMR---AAGCKPNICTFNALIKMHGNRGRFAEMMKVFEE 453
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY------QTYGALLNCY 141
+ IC AP V + + V G +S S + + K T+ L++ Y
Sbjct: 454 IE---ICNCAP--DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAY 508
Query: 142 VRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDN 201
R +A++ +++M E G+ +YN ++ ++ G +E+ V EMK P+
Sbjct: 509 SRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNE 568
Query: 202 FSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASD 258
+Y +++Y ++E M + E+ S +P VL + L++ D
Sbjct: 569 LTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLV-----------LVNSKCD 617
Query: 259 VLKKAEERLEQ------KDGIGYNFLISLYAS---LGNKSEVLRLWDLEKTACKRYINRD 309
+L + E E+ D N +I++Y + +E+L + +
Sbjct: 618 LLMETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSL---AT 674
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ + E +E+VLKE G D N VI YC NG +++A I +
Sbjct: 675 YNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMK 734
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G ++ A Y E ++ Y+ G K + SI+
Sbjct: 735 TYGLVPDVITYNTFVASYAADSLFEDAIGVVR-----YMIKHGCKRNQNTYNSIVDGYCK 789
Query: 430 EGSVQDVEAFVAALRTVIP 448
D FV++L + P
Sbjct: 790 HSRRADAIMFVSSLNQLDP 808
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 125/283 (44%), Gaps = 14/283 (4%)
Query: 118 ESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYS 177
E S D+ T+ T LL+ Y + R+ +A+ ++M+ G + S +TYN ++ Y+
Sbjct: 313 EMKLSGFSPDKVTFNT---LLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYA 369
Query: 178 KTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY-GARSDLEGMEII--LREMESQPHIV 234
+ G + ++ +M K I PD F+Y ++ + A D M I +R +P+I
Sbjct: 370 RDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNIC 429
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
T+ + + + V ++ E D + +N L++++ G SEV +
Sbjct: 430 ----TFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGV 485
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
+ K A + T++ A + G ++A V K +G + D NAV+
Sbjct: 486 FKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALAR 545
Query: 355 NGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTER 395
GL + +E + ++ K PN ++ + Y ++ + ER
Sbjct: 546 GGLWEQSEKVFAEM--KDGRCKPNELTYCSLLHAYANSKEIER 586
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 128/302 (42%), Gaps = 22/302 (7%)
Query: 145 RQTDKALSHF---RKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDN 201
++ D A+S F R+ ++ L+ I+ + K G+ +L ++ D
Sbjct: 158 KKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDV 217
Query: 202 FSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLI-DKAS 257
++Y I +Y + ++ ++ME + P ++ TY + Y K + K S
Sbjct: 218 YAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLI----TYNVILNVYGKMGMPWSKIS 273
Query: 258 DVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEAL 317
++ + D YN LIS E ++++ K + + T+L+
Sbjct: 274 GLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVY 333
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
K +EA +VLKE E SG S N++I Y +GL++ A + + +VEKG
Sbjct: 334 GKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDV 393
Query: 378 NSWAVVAAGYFDAGKTE---RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
++ + +G+ AG E R F M+AA G KP+ +++ G+ G
Sbjct: 394 FTYTTLLSGFEKAGMDEPAMRIFGEMRAA--------GCKPNICTFNALIKMHGNRGRFA 445
Query: 435 DV 436
++
Sbjct: 446 EM 447
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 96/228 (42%), Gaps = 28/228 (12%)
Query: 114 FLSAESYFSNLKDD-EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI 172
+ E F LK T A++ Y R++ KA M E G + S TYN +
Sbjct: 619 LMETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSL 678
Query: 173 MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH 232
M ++S++ +E+ +VL E+ AK + PD SY I +Y ++ I M++
Sbjct: 679 MYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTY-G 737
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
+V D TY + Y +L + A V++ + +++ YN ++ Y
Sbjct: 738 LVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGY---------- 787
Query: 293 RLWDLEKTACKRYINRDYITMLEALMKLGEH---EE----AEKVLKEW 333
CK D I + +L +L H EE +E++ K+W
Sbjct: 788 ---------CKHSRRADAIMFVSSLNQLDPHVTKEEELRLSERIAKKW 826
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 156/380 (41%), Gaps = 55/380 (14%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---C-----------L 175
T TY L++C R + + AL+ F ++ G+ + + N ++ C L
Sbjct: 114 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDIL 173
Query: 176 YSKTGQYEKVPDV---------------------LTEMKAKN---IFPDNFSYRICINSY 211
+T + VPDV L M A+ PD +Y I+ +
Sbjct: 174 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCF 233
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
D+ + +EM Q I D TY+S H KA + KA L++ + D
Sbjct: 234 FKEGDVNKACDLFKEM-VQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPD 292
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEK 328
YN LI Y+S G E +R++ K + I D +T ++ +L K G+ +EA
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVF---KEMRRHSILPDVVTLNMLMGSLCKYGKIKEARD 349
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
V + G + D ++ GY G + + + + ++ G A +++V+ Y
Sbjct: 350 VFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYA 409
Query: 389 DAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRT 445
+ G ++ A+ ++ E + G KPD T++++ L G + D +E F +
Sbjct: 410 NCGMLDK-------AMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQ 462
Query: 446 VIPMNRQMYHAFIKANIRNG 465
+ ++ YH I+ +G
Sbjct: 463 GVAPDKYAYHCLIQGFCTHG 482
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 121/280 (43%), Gaps = 7/280 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ Y Q +A+ F++M+ I +T N +M K G+ ++ DV M
Sbjct: 295 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTM 354
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD FSY+I +N Y + L M + M I D T++ Y +
Sbjct: 355 AMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGD-GIAPDIYTFSVLIKAYANCGM 413
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL---EKTACKRYINRD 309
+DKA + + + + D + Y +I+ +G + + ++ + A +Y
Sbjct: 414 LDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA--- 470
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ G +A++++ E +G D +++I C G + +A+ I + V
Sbjct: 471 YHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTV 530
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
G+ ++++ GY GK E+ + A +S +E
Sbjct: 531 NVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 570
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 125/308 (40%), Gaps = 12/308 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +++C+ ++ +KA F++M + GI +TY+ ++ K K L +M
Sbjct: 225 AYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQM 284
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PDN++Y I Y + + + +EM I+ D T K
Sbjct: 285 VNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH-SILPDVVTLNMLMGSLCKYGK 343
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL---EKTACKRYINRD 309
I +A DV + + D Y +++ YA+ G ++ L+DL + A Y
Sbjct: 344 IKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT--- 400
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ +++A G ++A + E G D VI C G + +A ++
Sbjct: 401 FSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMI 460
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
++G A ++ + G+ G + + L + + G + D +SI++ L
Sbjct: 461 DQGVAPDKYAYHCLIQGFCTHGSLLKAKE-----LILEIMNNGMRLDIVFFSSIINNLCK 515
Query: 430 EGSVQDVE 437
G + D +
Sbjct: 516 LGRIMDAQ 523
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 103/262 (39%), Gaps = 38/262 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+ Y DKA+ F +M++ G+ +TY ++ + G+ + + +M
Sbjct: 400 TFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQM 459
Query: 193 KAKNIFPDNFSYRICINSYGAR-SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
+ + PD ++Y I + S L+ E+IL M + + LD ++S + K
Sbjct: 460 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNG--MRLDIVFFSSIINNLCKLG 517
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
I A ++ + D + Y+ L+ Y
Sbjct: 518 RIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYC---------------------------- 549
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+G+ E+A +V +G + + ++ GYC G + ++ ++++K
Sbjct: 550 -------LVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQK 602
Query: 372 GKATTPNSWAVVAAGYFDAGKT 393
G + + ++ G F AG+T
Sbjct: 603 GIKPSTILYNIIIDGLFVAGRT 624
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 1/148 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y L++ Y + +KAL F M GI + + Y ++ Y K G+ ++ + EM
Sbjct: 540 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREM 599
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K I P Y I I+ ++ EM ++ I ++ TY + K
Sbjct: 600 LQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEM-TESGIAINKCTYNIVLRGFFKNRC 658
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLIS 280
D+A + K+ + D I N +I+
Sbjct: 659 FDEAIFLFKELRAMNVKIDIITLNTMIA 686
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E YG L+N Y + + D+ LS FR+M + GI ST+ YN I+ G+
Sbjct: 570 EPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKV 629
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
EM I + +Y I + + + + +E+ + ++ +D T +
Sbjct: 630 KFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAM-NVKIDIITLNTMIAGM 688
Query: 248 IKANLIDKASDVL 260
+ +++A D+
Sbjct: 689 FQTRRVEEAKDLF 701
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 131/332 (39%), Gaps = 58/332 (17%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +LL+CYVRQ+ + M+ GI T D C P VL E
Sbjct: 52 YNSLLDCYVRQKDDGRVQEILEIMENEGI---EATVGDGTC--------GGPPKVLDECV 100
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP---------------------- 231
+ P+ +Y + IN + +E E++L +M+ Q
Sbjct: 101 GNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVD 160
Query: 232 ------------HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+ LD TY + A + N +D+A +L E + + Y LI
Sbjct: 161 DALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLI 220
Query: 280 SLYASLGNKSEVLRLWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
S++ G+ E RL+ EK A + Y M+ K G EAE+ KE E G
Sbjct: 221 SIHCKDGDMVEARRLFREMAEKGATPSVVT--YNVMIHGYAKKGSIREAERFRKEMEKKG 278
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTER 395
D +++ G+C NG V A + E++ ++G T PN ++ + +G G++E
Sbjct: 279 FVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRG--TEPNVVAYTALISGLAKEGRSEA 336
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
FQ L G PD + ++++ L
Sbjct: 337 AFQLYDDMLKA-----GLIPDDSLYSALVGSL 363
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L R + D+A + M EMG+ + +TY ++ ++ K G + + EM
Sbjct: 180 TYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREM 239
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K P +Y + I+ Y + + E +EME + V D TYAS H +
Sbjct: 240 AEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKK-GFVPDVYTYASLVHGHCVNGK 298
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
+D A + ++ ++R + + + Y LIS A G +L+D
Sbjct: 299 VDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYD 342
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 26/279 (9%)
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
RV+G L ++ SN+ +Y ++NC+ R + D A FR M+ G+ + +T+
Sbjct: 415 RVYGQLISDGLISNVF-------SYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTF 467
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ + K G +K +L + + PD F++ S ++G+ I R E+
Sbjct: 468 NTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFS---------SIVDGLCQIKRTEEA 518
Query: 230 QPHI--VLDWSTYASAAHFYIKANLIDKASDVLKKAEE-RLEQKDGIG-----YNFLISL 281
+++W +A + I + DV + + R QK+GI YN LI +
Sbjct: 519 LECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQI 578
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+ + + +L+D + N Y +EAL + G EEA+K+ E +G S D
Sbjct: 579 FCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPD 638
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA--TTPN 378
+ I N +I V+ A+ I+E +KG + + PN
Sbjct: 639 SYICNLIIKILVQQEYVEEAQNIIERCRQKGISLNSIPN 677
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 159/414 (38%), Gaps = 54/414 (13%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T + Y AL++ V+ D A F++M TYN ++ K G ++ ++
Sbjct: 178 TTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLV 237
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+MK K FP+ F+Y + I + S ++ + M+ + + +T + H +
Sbjct: 238 RQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDS-GVYPNEATVRALVHGVFR 296
Query: 250 ANLIDKASDVLKKAEERLEQKDGI------------------------------------ 273
KA ++L + +R ++++ +
Sbjct: 297 CVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYF 356
Query: 274 -GYNFLISLYASLGNKSEVLRLWD----LEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
G + + A L +E+ D L K K I Y+ ++E L K EE ++
Sbjct: 357 PGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGA-YLALIEVLYKNEWREEGDR 415
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
V + G + N +I +C L+ NA D+ +G ++ + G+
Sbjct: 416 VYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHC 475
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVI 447
G ++ + +++ L G KPD +SI+ L ++ +E F + I
Sbjct: 476 KDGAIDKARKLLESLLE-----NGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGI 530
Query: 448 PMNRQMYHAFIKA--NIRNGKGVDELLDSMKADGIDEDEETKEILV---CTMEK 496
N +Y+ I++ I + +LL M+ +GI D + L+ C M K
Sbjct: 531 NPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNK 584
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/318 (17%), Positives = 128/318 (40%), Gaps = 18/318 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+ ++ C V+ + + F +++ G+ Y ++ + K E+ V ++
Sbjct: 361 VFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQL 420
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + + FSY + IN + ++ R+M+ + +V + T+ + + + K
Sbjct: 421 ISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVR-GVVPNLVTFNTLINGHCKDGA 479
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL------WDLEKTACKRYI 306
IDKA +L+ E + D ++ ++ + E L W + A
Sbjct: 480 IDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVI--- 536
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y ++ +L +G+ + K+L+ + G S DT NA+I +C V+ A+ + +
Sbjct: 537 ---YNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFD 593
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ G +++ ++G+ E + + +E G PD + I+
Sbjct: 594 SMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYS-----MEANGCSPDSYICNLIIKI 648
Query: 427 LGDEGSVQDVEAFVAALR 444
L + V++ + + R
Sbjct: 649 LVQQEYVEEAQNIIERCR 666
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 155/410 (37%), Gaps = 75/410 (18%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ + D+AL R+MK+ G + TY ++ + + ++ V M
Sbjct: 216 TYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETM 275
Query: 193 KAKNIFPDNFSYRI-------CINSYGARSDLEGMEIILREMESQ-PHIVLDWSTYASAA 244
K ++P+ + R C++ A L E + RE E + H +L T
Sbjct: 276 KDSGVYPNEATVRALVHGVFRCVDPSKALELLS--EFLDREQEQERVHFMLACDTV---- 329
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGI--GYNFLISLYASLGNKSEVLRLWD----LE 298
Y AN + + + R+ + G G + + A L +E+ D L
Sbjct: 330 -LYCLAN--NSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILR 386
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKV----------------------------- 329
K K I Y+ ++E L K EE ++V
Sbjct: 387 KQGVKAGIGA-YLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLM 445
Query: 330 ------LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
++ ++ G + N +I G+C +G + A +LE L+E G +++ +
Sbjct: 446 DNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSI 505
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK-VITSILSKLGDEGSVQDVEAFVAA 442
G +TE +C + E W +P VI +IL + ++ DV V
Sbjct: 506 VDGLCQIKRTEEALEC-------FTEMIEWGINPNAVIYNILIR--SLCTIGDVARSVKL 556
Query: 443 LRTV----IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEET 486
LR + I + Y+A I+ R K +L DSM G++ D T
Sbjct: 557 LRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYT 606
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 159/369 (43%), Gaps = 20/369 (5%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+T G L+ + + +A R+ E G+ +N ++ + K + +V +++
Sbjct: 264 ETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHT 323
Query: 192 MKAKNIFPDNFSYRICINSYGAR-SDLEGMEII--LREMESQPHIVLDWSTYASAAHFYI 248
M KN PD F+Y+ IN + L+ E+ L++ P +V+ Y + H +
Sbjct: 324 MIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVM----YTTLIHGFC 379
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K ++ AS + + ++ + YN LI + +GN E ++L+ + +
Sbjct: 380 KMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTL 439
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
T++ L G +EA +E D N +I G+C G V + +L++L
Sbjct: 440 SCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKEL 499
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
KG + +S+A + G + + + +G +P I+S L
Sbjct: 500 QAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWND-----MHNRGLQPMVCTRDHIISGLC 554
Query: 429 DEG-SVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETK 487
++G V+ +E + L++ + ++ ++ I++ I+ GK ELL +K D + +K
Sbjct: 555 EQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIGK---ELLLELKMDS----KTSK 607
Query: 488 EILVCTMEK 496
E+ M K
Sbjct: 608 EVYPLAMTK 616
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 30/192 (15%)
Query: 54 VKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHG 113
VKN N + Q II K QA EV + + +G +AP D + LI HG
Sbjct: 326 VKNRNP-DIFTYQEIINGFCKNWMTLQAFEVFNALKDRG---YAP-DMVMYTTLI---HG 377
Query: 114 FLSAESYFSNLKDDEKTY------------QTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
F L+D K + +Y L+ + + D+A+ ++KM + G
Sbjct: 378 FCK----MGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSG 433
Query: 162 IALSTLTYNDI---MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
+TL+ N + +CL+ +T ++ D EM KNI D +Y I + +
Sbjct: 434 YKETTLSCNTLILGLCLHGRT---DEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVL 490
Query: 219 GMEIILREMESQ 230
+L+E++++
Sbjct: 491 QSTDLLKELQAK 502
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 148/352 (42%), Gaps = 11/352 (3%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
ALL R R T A F +M G+A+ST YN ++ + K G + ++T M A
Sbjct: 154 ALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAA 213
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
+ D FSY I Y + + + +R+ + I D T+ S H K + +
Sbjct: 214 GVPLDRFSYNTVIALY-CKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKE 272
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTACKRYINRDYITML 314
A+ + + D + Y LI Y GN E ++L ++E T + Y +L
Sbjct: 273 AAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVA-TYNAIL 331
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
L + G+ +E ++L E + D N +I YC G + +A + + ++E G
Sbjct: 332 RKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQ 391
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
++ + G+ A + + K A V+ G+ P+ V + ++ + +
Sbjct: 392 LNQFTYKALIHGFCKAKELDEA----KEAFFQMVDA-GFSPNYSVFSWLVDGFCKKNNAD 446
Query: 435 DVEAFVAAL-RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
V L + +P ++ +Y + I+ R G ++ D M++ G+ D
Sbjct: 447 AVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGD 498
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 139/343 (40%), Gaps = 49/343 (14%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQ--LDLIGRVHGFLSAESYFSNLKDDEK 129
L + R AL V D M +G+ AP HA L + R +A F +
Sbjct: 124 LAQSARPHDALRVFDQMRARGL---APDAHACTALLTALARARMTATARRVFDEMARAGL 180
Query: 130 TYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG------- 180
T Y A+L+ ++ +A + +M G+ L +YN ++ LY K G
Sbjct: 181 AVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMC 240
Query: 181 -------------------------QYEKVPD---VLTEMKAKNIFPDNFSYRICINSYG 212
+Y +V + + TEM A PDN +Y I+ Y
Sbjct: 241 VRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYC 300
Query: 213 ARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG 272
++E + EME+ ++ +TY + + + + + +L + +ER Q D
Sbjct: 301 RAGNIEEAVKLRGEMEAT-GMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADH 359
Query: 273 IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
+ N LI+ Y G+ + ++ + + Y ++ K E +EA++ +
Sbjct: 360 VTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQ 419
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL---EDLVEKG 372
+G S + + + ++ G+C NA+A+L ++L+++G
Sbjct: 420 MVDAGFSPNYSVFSWLVDGFCKK---NNADAVLLIPDELMKRG 459
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 138/326 (42%), Gaps = 24/326 (7%)
Query: 80 QALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLS------AESYFSNLKDDEKTYQ- 132
+A+ V D M+++GI A + +HG A F+ + + T
Sbjct: 237 EAMCVRDRMDKEGI-------RADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDN 289
Query: 133 -TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TY L++ Y R ++A+ +M+ G+ TYN I+ + G+ ++V +L E
Sbjct: 290 VTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNE 349
Query: 192 MKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
M + + D+ + IN+Y R + ++ + MES + L+ TY + H + KA
Sbjct: 350 MDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESG--LQLNQFTYKALIHGFCKA 407
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD- 309
+D+A + + + + +++L+ + N VL + D KR + D
Sbjct: 408 KELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPD---ELMKRGLPPDK 464
Query: 310 --YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y +++ L + G ++A+KV + + G D+ + + Y G A L+
Sbjct: 465 AVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDG 524
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKT 393
+ + TP + + Y D +T
Sbjct: 525 MAKNQLYITPQIYNCLCTSYADEKET 550
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 142/357 (39%), Gaps = 13/357 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
++ +L+ R +AL HFR+M+ GI + Y ++ + + G + EM
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
A+ F D +Y +N + +++ EM + +V D+ T+ + Y K
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER-GMVPDFYTFTTLIRGYCKDGN 517
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+DKA ++ + + D + YN LI + G LWD + K +I+ Y
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHIS--Y 575
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T+L G EA + + G + N +I GYC +G + A L ++
Sbjct: 576 GTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G S+ + GY E+ F + +E +G + + IL+ E
Sbjct: 636 NGIIPDSFSYNTLIDGYLKEANLEKAFILINE-----MEKRGLQFNIITYNLILNGFCAE 690
Query: 431 GSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIR--NGKGVDELLDSMKADGIDEDE 484
G +Q+ E + + + I + Y + I ++ N K D M G+ D+
Sbjct: 691 GKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 3/265 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N Y R+ ++A G+ LTYN I+ K G+Y++ DVL EM
Sbjct: 294 TYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEM 353
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P+ +Y + R ++ + I EM S+ ++ D +++S +
Sbjct: 354 LQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM-SRRGVLPDLVSFSSLIGVLARNGH 412
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-RDYI 311
+ +A ++ E D + Y LI + G S+ L++ D E A +++ Y
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRD-EMLARGCFMDVVTYN 471
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T L L K +A+ + E G D +I GYC +G + A + E +V
Sbjct: 472 TFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT 531
Query: 372 GKATTPNSWAVVAAGYFDAGKTERG 396
++ + G+ AG+ R
Sbjct: 532 NLKPDKVTYNTLIDGFCKAGEMGRA 556
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 1/172 (0%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
KD + +YG +LN + +AL+ +M E GI + +T N ++ Y ++G K
Sbjct: 566 KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPK 625
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
+ L++M + I PD+FSY I+ Y ++LE I++ EME + + + TY
Sbjct: 626 AYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR-GLQFNIITYNLIL 684
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
+ + + +A VL+K E DG Y+ LI+ + S N E R D
Sbjct: 685 NGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHD 736
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 138/346 (39%), Gaps = 50/346 (14%)
Query: 78 FSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT--YQTYG 135
S AL++ D M +G C + L+ + + F A+ F+ + + + T+
Sbjct: 448 LSDALKMRDEMLARG-CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFT 506
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
L+ Y + DKAL+ F M + +TYN ++ + K G+ + ++ +M K
Sbjct: 507 TLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK 566
Query: 196 NIFPDNFSYRICINSYGARSDL-EGMEIILREMES--QPHIVLDWSTYASAAHFYIKANL 252
+I PD+ SY +N + + L E + + + +E +P++V T + Y ++
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLV----TCNTLIKGYCRSGD 622
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ KA + L K D YN T
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYN-----------------------------------T 647
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ +K E+A ++ E E G ++ N ++ G+C G +Q AE +L ++E G
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
+++ + G+ + F+ L +G PD +
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ-----RGLVPDDR 748
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 149/357 (41%), Gaps = 21/357 (5%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL VR D A + ++ GI L+ T N ++ K ++E V L++M+ K
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKG 287
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLI 253
+F D +Y IN+Y +E +L S +P ++ TY + + K
Sbjct: 288 VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLL----TYNAILYGLCKIGKY 343
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI-- 311
D+A DVL + + + YN +L + + +L ++ +R + D +
Sbjct: 344 DRAKDVLIEMLQLGLTPNAATYN---TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSF 400
Query: 312 -TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+++ L + G +A +E E SG D I +I G+C NG + +A + ++++
Sbjct: 401 SSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLA 460
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+G VV F G ++ L + +G PD T+++ +
Sbjct: 461 RGCFMD-----VVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKD 515
Query: 431 GSV-QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDE 484
G++ + + F A +RT + ++ Y+ I + G+ EL D M I D
Sbjct: 516 GNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDH 572
>gi|125583699|gb|EAZ24630.1| hypothetical protein OsJ_08397 [Oryza sativa Japonica Group]
Length = 482
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 130/334 (38%), Gaps = 71/334 (21%)
Query: 117 AESYFSNLKDDEKTYQ---TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A YF +K ++ TY LL + + T + F+ + E ++ TYN +M
Sbjct: 166 ALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSPDIYTYNGVM 225
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII----LREMES 229
Y K G ++ VL MK+ PD ++ I I+SYG + + ME + LR E
Sbjct: 226 DAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQAFDKMEQVFKSLLRSKEK 285
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
H T+ S Y KA L +KA VL K E + + + LI +YA S
Sbjct: 286 PTH-----PTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMYAYCDCVS 340
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+++D E S N+ NA++
Sbjct: 341 RARQIFD-----------------------------------ELVSSQNNVHLSSVNAML 365
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
YC NGL A+ +L+ +++KG + +++ ++ Y A
Sbjct: 366 DAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYKAYTKAN------------------ 407
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
D K+I +L ++ +G V + + F+ AL
Sbjct: 408 ------DKKLIQKLLKRMNSQGIVPNKKFFLDAL 435
>gi|449523013|ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like, partial [Cucumis sativus]
Length = 594
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 136/333 (40%), Gaps = 38/333 (11%)
Query: 65 LQRIIRDLRKRKRFSQALEVSDWMN------RKGICVFAPCDHAV----QLDLIGRVHGF 114
L +I L K K++ QA+E+ M R + F H Q++ V
Sbjct: 78 LNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFST 137
Query: 115 LSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
+ AE N+ +Y AL++ Y +A S F +MK G ++Y ++
Sbjct: 138 MLAEGIKPNI-------VSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLIS 190
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QP 231
+ ++ Q + +V MK P+ SY +++YG+ L ILREME P
Sbjct: 191 TFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHP 250
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
++V + A+ F K N+ VL AE R + I N I Y ++G +
Sbjct: 251 NVVSICTLLAACGRFGQKVNI----DSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKA 306
Query: 292 LRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP------ 345
+ L+ + + + + ++ ++ ++EEA KE D RIP
Sbjct: 307 INLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEM------LDLRIPLSSEIY 360
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
+++I Y G + AE++ L KG P+
Sbjct: 361 SSMICAYSKQGQLVKAESLFNSL--KGSGCCPD 391
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 157/402 (39%), Gaps = 52/402 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+N +AL +KM + G+ +T+N ++ Y QY K M
Sbjct: 7 TFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELM 66
Query: 193 KAKNIFPDNFSYRICINS------YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
K NI PD + I I+ YG + +EI E + D T+ S H
Sbjct: 67 KGTNIRPDTTTLNIVIHCLIKVKQYG-----QAIEIFSSMREKRSECRPDVVTFTSIIHL 121
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA--CKR 304
Y I+ V + + + YN LIS YAS G E ++D K + C
Sbjct: 122 YSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPD 181
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
++ Y +++ + + A +V + + + NA++ Y +NG + A I
Sbjct: 182 VVS--YTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDI 239
Query: 365 LEDLVEKGKATTPNSWAVV----AAGYFD---------AGKTERGFQ-----CMKA---- 402
L ++ + G PN ++ A G F + RG C A
Sbjct: 240 LREMEQDG--IHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSY 297
Query: 403 --------ALSVY--VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNR 451
A+++Y +E K KPD T ++S ++ F + + IP++
Sbjct: 298 MNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSS 357
Query: 452 QMYHAFIKANIRNGKGV--DELLDSMKADGIDEDEETKEILV 491
++Y + I A + G+ V + L +S+K G D T ++
Sbjct: 358 EIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMI 399
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ R + ++AL F++M ++ I LS+ Y+ ++C YSK GQ K + +
Sbjct: 324 TFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSL 383
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD +Y IN+Y A E + + +EME+ +I LD ++ + K N
Sbjct: 384 KGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEAN-NIQLDSIACSALMKAFNKGN- 441
Query: 253 IDKASDVLKKAEERLEQKDGIGYN 276
+AS+VL AE + ++ GI +N
Sbjct: 442 --QASNVLILAE--IMKEKGIPFN 461
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ Y +++ Y +Q Q KA S F +K G +TY ++ YS + +EKV + E
Sbjct: 358 EIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQE 417
Query: 192 MKAKNIFPDNFS 203
M+A NI D+ +
Sbjct: 418 MEANNIQLDSIA 429
>gi|449446895|ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/424 (19%), Positives = 179/424 (42%), Gaps = 49/424 (11%)
Query: 44 TRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAV 103
+ + P L + G ++ +L I+R R+ ++ +WM G + ++
Sbjct: 88 SELAPALARY---GGLLKAQDLNVILRHFGMLSRWKDLSQLFEWMQETGKTNVS--SYSS 142
Query: 104 QLDLIGRVHGFLSAESYFSNLKDDEKTYQTY--GALLNCYVRQRQTDKALSHFRKMKEMG 161
+ +GR L A ++N+++ + ++LNC VR + D ++ F +MK G
Sbjct: 143 YIKFMGRGLNPLKALEVYNNIEEVSIKNSIFICNSILNCLVRNGKFDTSVKLFHQMKNDG 202
Query: 162 IALSTLTYNDIM--CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
+ T+TY+ ++ C+ K G Y K ++L E++ + D SY I + + LE
Sbjct: 203 LCPDTVTYSTMLTGCIRVKHG-YAKAMELLKELQDNGLCMDCVSYGTLIAICASHNRLED 261
Query: 220 MEIILREMESQPH----------------------------------IVLDWSTYASAAH 245
E +M ++ H +V + +
Sbjct: 262 AERFFNQMRAEGHSPNMFHYGSLLNAYSINGDYKKADELIEDMKLTGLVPNKVILTTLLK 321
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
Y++ L +K+ +L + E ++ + Y L+ A G+ E ++D K +
Sbjct: 322 VYVRGGLFEKSRKLLSELESLGYGENEMPYCLLMDGLAKAGSIREAKTVFDEMKAKNVKT 381
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+ M+ A + G EEA+ + K++E + + YD I N ++ YC G +++ +L
Sbjct: 382 DGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEMESVMQML 441
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+ + + N++ ++ +F K + C + ++ KG +P+ ++ +S++
Sbjct: 442 RKMDDLAISPDYNTFHILIKYFF---KEKLYLLCYRTLEDMH--RKGHQPEEELCSSLIL 496
Query: 426 KLGD 429
LG+
Sbjct: 497 SLGN 500
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 142/357 (39%), Gaps = 13/357 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
++ +L+ R +AL HFR+M+ GI + Y ++ + + G + EM
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
A+ F D +Y +N + +++ EM + +V D+ T+ + Y K
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER-GMVPDFYTFTTLIRGYCKDGN 517
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+DKA ++ + + D + YN LI + G LWD + K +I+ Y
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHIS--Y 575
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T+L G EA + + G + N +I GYC +G + A L ++
Sbjct: 576 GTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G S+ + GY E+ F + +E +G + + IL+ E
Sbjct: 636 NGIIPDSFSYNTLIDGYLKEANLEKAFILINE-----MEKRGLQFNIITYNLILNGFCAE 690
Query: 431 GSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIR--NGKGVDELLDSMKADGIDEDE 484
G +Q+ E + + + I + Y + I ++ N K D M G+ D+
Sbjct: 691 GKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 3/265 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N Y R+ ++A G+ LTYN I+ K G+Y++ DVL EM
Sbjct: 294 TYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEM 353
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P+ +Y + R ++ + I EM S+ ++ D +++S +
Sbjct: 354 LQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM-SRRGVLPDLVSFSSLIGVLARNGH 412
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-RDYI 311
+ +A ++ E D + Y LI + G S+ L++ D E A +++ Y
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRD-EMLARGCFMDVVTYN 471
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T L L K +A+ + E G D +I GYC +G + A + E +V
Sbjct: 472 TFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT 531
Query: 372 GKATTPNSWAVVAAGYFDAGKTERG 396
++ + G+ AG+ R
Sbjct: 532 NLKPDKVTYNTLIDGFCKAGEMGRA 556
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 1/172 (0%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
KD + +YG +LN + +AL+ +M E GI + +T N ++ Y ++G K
Sbjct: 566 KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPK 625
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
+ L++M + I PD+FSY I+ Y ++LE I++ EME + + + TY
Sbjct: 626 AYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR-GLQFNIITYNLIL 684
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
+ + + +A VL+K E DG Y+ LI+ + S N E R D
Sbjct: 685 NGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHD 736
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 138/346 (39%), Gaps = 50/346 (14%)
Query: 78 FSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT--YQTYG 135
S AL++ D M +G C + L+ + + F A+ F+ + + + T+
Sbjct: 448 LSDALKMRDEMLARG-CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFT 506
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
L+ Y + DKAL+ F M + +TYN ++ + K G+ + ++ +M K
Sbjct: 507 TLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK 566
Query: 196 NIFPDNFSYRICINSYGARSDL-EGMEIILREMES--QPHIVLDWSTYASAAHFYIKANL 252
+I PD+ SY +N + + L E + + + +E +P++V T + Y ++
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLV----TCNTLIKGYCRSGD 622
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ KA + L K D YN T
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYN-----------------------------------T 647
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ +K E+A ++ E E G ++ N ++ G+C G +Q AE +L ++E G
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
+++ + G+ + F+ L +G PD +
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ-----RGLVPDDR 748
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 149/357 (41%), Gaps = 21/357 (5%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL VR D A + ++ GI L+ T N ++ K ++E V L++M+ K
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKG 287
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLI 253
+F D +Y IN+Y +E +L S +P ++ TY + + K
Sbjct: 288 VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLL----TYNAILYGLCKIGKY 343
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI-- 311
D+A DVL + + + YN +L + + +L ++ +R + D +
Sbjct: 344 DRAKDVLIEMLQLGLTPNAATYN---TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSF 400
Query: 312 -TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+++ L + G +A +E E SG D I +I G+C NG + +A + ++++
Sbjct: 401 SSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLA 460
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+G VV F G ++ L + +G PD T+++ +
Sbjct: 461 RGCFMD-----VVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKD 515
Query: 431 GSV-QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDE 484
G++ + + F A +RT + ++ Y+ I + G+ EL D M I D
Sbjct: 516 GNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDH 572
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 134/308 (43%), Gaps = 12/308 (3%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MCLYSKTGQYEKVP 186
T T L+N Y + + + AL + ++ G +TYN +C G KV
Sbjct: 254 TKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVM 313
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
DV+ + PD F+Y I +N LE + IL +M + + D +T+ +
Sbjct: 314 DVMVQEGHD---PDVFTYNIVVNCLCKNGQLEEAKGILNQMVER-GCLPDITTFNTLIVA 369
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
N +++A D+ ++ + D +N LI+ +G+ LRL++ K++
Sbjct: 370 LCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPD 429
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y T+++ L LG+ +A +LKE E +G T N +I G C ++ AE + +
Sbjct: 430 EVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFD 489
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ +G + ++ + G + + Q + +S +G +P+ SIL+
Sbjct: 490 QMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMIS-----EGLQPNNITYNSILTH 544
Query: 427 LGDEGSVQ 434
+G ++
Sbjct: 545 YCKQGDIK 552
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 140/348 (40%), Gaps = 19/348 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++NC + Q ++A +M E G T+N ++ + E+ D+ ++
Sbjct: 327 TYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQV 386
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PD +++ I IN+ D + + EM+S D TY +
Sbjct: 387 TLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSS-GCTPDEVTYNTLIDNLCSLGK 445
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYAS---LGNKSEVLRLWDLEKTACKRYINRD 309
+ KA D+LK+ E + + YN +I + EV DL+ I+R+
Sbjct: 446 LGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQG------ISRN 499
Query: 310 YI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
I T+++ L K ++A +++ + G + N+++ YC G ++ A IL+
Sbjct: 500 AITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQ 559
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ G ++ + G AG+T+ + ++ + KG + PK ++
Sbjct: 560 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRG-----MRIKGMRATPKAYNPVIQS 614
Query: 427 LGDEGSVQDVEAFVAALRTVI-PMNRQMYHAFIKANIRNGKGVDELLD 473
L + +D + V P + Y + R G + E D
Sbjct: 615 LFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFD 662
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 117/301 (38%), Gaps = 15/301 (4%)
Query: 136 ALLNCYVRQR----QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ L Y RQ+ D L+ + GI T+ YN ++ + + + + + V +E
Sbjct: 118 SFLESYARQQLFVDAVDLVLNQLDPL--FGIQADTVVYNHLLNVLVEGSKMKLLETVYSE 175
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M + I PD ++ + + + ++L EM S + D +T+ + +++
Sbjct: 176 MGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSS-GVAPDETTFTTLMQGFVEEG 234
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
I A V + E + N LI+ Y LG + L E Y
Sbjct: 235 SIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYN 294
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T + L + G A KV+ G+ D N V+ C NG ++ A+ IL +VE+
Sbjct: 295 TFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVER 354
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP---KVITSILSKLG 428
G ++ + + E L+ V KG PD ++ + L K+G
Sbjct: 355 GCLPDITTFNTLIVALCSGNRLEEALD-----LARQVTLKGLSPDVYTFNILINALCKVG 409
Query: 429 D 429
D
Sbjct: 410 D 410
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/368 (18%), Positives = 139/368 (37%), Gaps = 21/368 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y LLN V + + + +M E GI +T+N +M + Q +L EM
Sbjct: 152 VYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 211
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEG---MEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ + PD ++ + + ++ ++ + EM P V T + Y K
Sbjct: 212 SSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKV----TVNVLINGYCK 267
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
++ A +++ + D I YN ++ G+ L++ D+
Sbjct: 268 LGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFT 327
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ L K G+ EEA+ +L + G D N +I+ C+ ++ A + +
Sbjct: 328 YNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVT 387
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTE---RGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
KG + ++ ++ G + R F+ MK++ G PD +++
Sbjct: 388 LKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSS--------GCTPDEVTYNTLIDN 439
Query: 427 LGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
L G + + + + P + Y+ I + + +E+ D M GI +
Sbjct: 440 LCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 499
Query: 484 EETKEILV 491
T L+
Sbjct: 500 AITFNTLI 507
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 162/431 (37%), Gaps = 77/431 (17%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E T Y +L++ Y R ++ALS RKMKE GI +S +TY+ ++ ++K E
Sbjct: 300 EPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADH 359
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP--------HIVLDWST 239
E K ++ + Y I ++ ++ E ++REME + H ++D T
Sbjct: 360 WFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYT 419
Query: 240 --------------------------YASAAHFYIKANLIDKASDVLKKAE--------- 264
Y + YIK + KA +V K E
Sbjct: 420 IIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMK 479
Query: 265 ---------ERLEQ------------KDGIG-----YNFLISLYASLGNKSEVLRLWDLE 298
RL+ KDG+ YN +I + +GN +R
Sbjct: 480 TYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEM 539
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
+ R R ++ ++ + G+ A ++ SG NA+I+G +
Sbjct: 540 QKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQM 599
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
+ A IL+++ G + +++ + GY G T + F+ ++ +G + D
Sbjct: 600 EKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTK-----LKTEGLELDVY 654
Query: 419 VITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDELLDSM 475
++L G +Q A + + IP N +Y+ I R G EL+ M
Sbjct: 655 TYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQM 714
Query: 476 KADGIDEDEET 486
K +G+ D T
Sbjct: 715 KQEGVQPDIHT 725
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 112/240 (46%), Gaps = 22/240 (9%)
Query: 62 VGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLS----- 116
V +I L ++ + +A+E+ D M+ GI +P +H + HG+ S
Sbjct: 583 VHTFNALILGLVEKCQMEKAVEILDEMSLAGI---SPNEHTYTTIM----HGYASLGDTG 635
Query: 117 -AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A YF+ LK + E TY ALL + + AL+ R+M I +T YN ++
Sbjct: 636 KAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILI 695
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---Q 230
+++ G + +++ +MK + + PD +Y IN+ D++ ++EME +
Sbjct: 696 DGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVK 755
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
P+I TY + H + +A+L +KA ++ + + D Y+ L++ S + +E
Sbjct: 756 PNI----KTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAE 811
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 14/258 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGF-------LSAESY 120
II + +ALE+ D M G C+ P H ++G V + E
Sbjct: 554 IIHGFARSGDMRRALEIFDMMRWSG-CI--PTVHTFNALILGLVEKCQMEKAVEILDEMS 610
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+ + +E TY T +++ Y T KA +F K+K G+ L TY ++ K+G
Sbjct: 611 LAGISPNEHTYTT---IMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSG 667
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ + V EM ++ I + F Y I I+ + R D+ ++++M+ Q + D TY
Sbjct: 668 RMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK-QEGVQPDIHTY 726
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
S + KA + +A+ +++ E + + Y LI +A + L+ + K+
Sbjct: 727 TSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKS 786
Query: 301 ACKRYINRDYITMLEALM 318
A + Y ++ +L+
Sbjct: 787 AGLKPDKAVYHCLMTSLL 804
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/405 (17%), Positives = 160/405 (39%), Gaps = 56/405 (13%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ Y +K L F ++KE G S ++Y ++ LY K G+ K +V M+
Sbjct: 411 YHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMME 470
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKA 250
I + +Y + IN + D + ++ +P +VL Y + +
Sbjct: 471 VAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVL----YNNIIRAFCGM 526
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK-TACKRYINRD 309
+D+A +K+ ++ + + +I +A G+ L ++D+ + + C ++
Sbjct: 527 GNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVH-T 585
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY----------------- 352
+ ++ L++ + E+A ++L E L+G S + ++ GY
Sbjct: 586 FNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLK 645
Query: 353 ------------------CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
C +G +Q+A A+ ++ + + ++ G+
Sbjct: 646 TEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGW-----AR 700
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-----EAFVAALRTVIPM 449
RG A L ++ +G +PD TS ++ G +Q E V ++ I
Sbjct: 701 RGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKT 760
Query: 450 NRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCTM 494
+ H + +A++ + + MK+ G+ D+ L+ ++
Sbjct: 761 YTTLIHGWARASL--PEKALKCFQEMKSAGLKPDKAVYHCLMTSL 803
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 137/352 (38%), Gaps = 50/352 (14%)
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVL 235
Y++ G M+A+ I P + Y I++Y D+E +R+M+ + I +
Sbjct: 278 YARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEE-GIEM 336
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLE--------------------------- 268
TY+ + K + A K+A+ER
Sbjct: 337 SLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALV 396
Query: 269 ---QKDGIG-----YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKL 320
+++GI Y+ ++ Y +GN+ + L ++D K Y ++ +K+
Sbjct: 397 REMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKI 456
Query: 321 GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
G+ +A +V K E++G ++ + + +I G+ NA A+ ED+V+ G +
Sbjct: 457 GKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLY 516
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ------ 434
+ + G +R + +K ++ + +P + I+ G ++
Sbjct: 517 NNIIRAFCGMGNMDRAIRTVKE-----MQKERHRPTTRTFMPIIHGFARSGDMRRALEIF 571
Query: 435 DVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEET 486
D+ + + TV N + K + K V E+LD M GI +E T
Sbjct: 572 DMMRWSGCIPTVHTFNALILGLVEKCQME--KAV-EILDEMSLAGISPNEHT 620
>gi|125541147|gb|EAY87542.1| hypothetical protein OsI_08951 [Oryza sativa Indica Group]
Length = 482
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 130/334 (38%), Gaps = 71/334 (21%)
Query: 117 AESYFSNLKDDEKTYQ---TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A YF +K ++ TY LL + + T + F+ + E ++ TYN +M
Sbjct: 166 ALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSPDIYTYNGVM 225
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII----LREMES 229
Y K G ++ VL MK+ PD ++ I I+SYG + + ME + LR E
Sbjct: 226 DAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQAFDKMEQVFKSLLRSKEK 285
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
H T+ S Y KA L +KA VL K E + + + LI +YA S
Sbjct: 286 PTH-----PTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMYAYCDCVS 340
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+++D E S N+ NA++
Sbjct: 341 RARQIFD-----------------------------------ELVSSQNNVHLSSVNAML 365
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
YC NGL A+ +L+ +++KG + +++ ++ Y A
Sbjct: 366 DAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYKAYTKAN------------------ 407
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
D K+I +L ++ +G V + + F+ AL
Sbjct: 408 ------DKKLIQKLLKRMNSQGIVPNKKFFLDAL 435
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 166/365 (45%), Gaps = 17/365 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ + + AL+ F +M GI + +TYN ++ G++ +L++M
Sbjct: 242 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 301
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ I P+ ++ I+++ L E + EM + I D TY+S + + + +
Sbjct: 302 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRL 360
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI---NRDY 310
D+A + + + + + YN LI + E + L+ + +R + Y
Sbjct: 361 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF---REMSQRGLVGNTVTY 417
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T+++ L + G+ + A+K+ K+ G D + ++ G C G ++ A + E L +
Sbjct: 418 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 477
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
++ ++ G AGK E G+ + +LS+ KG KP+ + T+++S +
Sbjct: 478 SKMEPDIYTYNIMIEGMCKAGKVEDGWD-LFCSLSL----KGVKPNVIIYTTMISGFCRK 532
Query: 431 GSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEET 486
G ++ +A ++ +P N Y+ I+A +R+G EL+ M++ G D T
Sbjct: 533 GLKEEADALFREMKEDGTLP-NSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 591
Query: 487 KEILV 491
+++
Sbjct: 592 ISMVI 596
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 128/307 (41%), Gaps = 42/307 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMG-----IALSTLT--------YNDIMCLYSKT 179
+Y L+NC+ R+ Q AL+ KM ++G + LS+L ++ + L +
Sbjct: 101 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 160
Query: 180 GQYEKVPDVLT----------------------EMKAKNIFPDNFSYRICINSYGARSDL 217
E P+ +T M A+ PD F+Y +N R D+
Sbjct: 161 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 220
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
+ +L++ME + I D Y + ++ A ++ + + + + + + YN
Sbjct: 221 DLALSLLKKME-KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 279
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWE 334
LI + G S+ RL +R IN + +T +++A +K G+ EAEK+ E
Sbjct: 280 LIRCLCNYGRWSDASRLL---SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 336
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
D +++I G+C + + A+ + E ++ K ++ + G+ A + E
Sbjct: 337 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 396
Query: 395 RGFQCMK 401
G + +
Sbjct: 397 EGMELFR 403
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 124/300 (41%), Gaps = 19/300 (6%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+D +VK G V E +++ ++ KR S +N G C+ D A +
Sbjct: 316 IDAFVKEGKLV---EAEKLYDEMIKRSIDPDIFTYSSLIN--GFCMHDRLDEAKHM---- 366
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+ ++ F N+ TY L+ + + ++ ++ + FR+M + G+ +T+TY
Sbjct: 367 --FELMISKDCFPNV-------VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 417
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ + G + + +M + + PD +Y I ++ LE ++ ++
Sbjct: 418 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ- 476
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + D TY KA ++ D+ + + + I Y +IS + G K
Sbjct: 477 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 536
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
E L+ K + Y T++ A ++ G+ + +++KE G D + VI
Sbjct: 537 EADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 596
>gi|302754736|ref|XP_002960792.1| hypothetical protein SELMODRAFT_402152 [Selaginella moellendorffii]
gi|300171731|gb|EFJ38331.1| hypothetical protein SELMODRAFT_402152 [Selaginella moellendorffii]
Length = 400
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 165/376 (43%), Gaps = 30/376 (7%)
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
AL++ R D+A + KE G Y+ ++ K G +++ V++EM
Sbjct: 32 AALISFCHRVEDLDEARQLLARSKEQGAKPEFSCYHTLLDGCCKFGSPDELLAVISEMDE 91
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
PD +Y I SY S L+ I + + + + ++ S Y+S Y +A+
Sbjct: 92 CGAPPDARAYAFLIASYAKASMLDKASEIFQTLRRK-NAGIESSVYSSLVWLYCQADRPK 150
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRD-YIT 312
A + LK EE + +D I YN +IS Y +G S+ R++ D++K K + R Y
Sbjct: 151 DAEEFLKAMEEDRKDEDCISYNVVISAYQRMGCYSDATRIFQDMKKKKKKETLGRSTYKL 210
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+L+ +K +H+ +K+ KE S S + A + Y + V++AE + E+L G
Sbjct: 211 ILDVYLKASDHDSFDKLFKEMLGSKVSGEASTLEAAVNLYASRDSVKDAEWLYENLAPSG 270
Query: 373 KATTPNSWAVVAAGYFDAGKT---ERGFQCM-----------KAALSVYVEGKGWKPDPK 418
T + + + AG T +R ++ M + ++ ++ + ++ +
Sbjct: 271 SRLTVLGYNKLLELFLAAGNTAMVDRIYREMPRVVSPDQTTRRLVMTAFLRAQSFRGAVE 330
Query: 419 VITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKAD 478
+ IL + G + D+++F +R + M R Y +K L+ M+
Sbjct: 331 LHEEILRESGGVQPLLDLQSFALLVRAYVKMER--YFEAMK-----------LVVLMRKA 377
Query: 479 GIDEDEETKEILVCTM 494
G+ DEE E +V M
Sbjct: 378 GMKVDEEIYEKVVTGM 393
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 148/353 (41%), Gaps = 42/353 (11%)
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
KAL +R M E GI + TYN ++ + K G+ ++ D++ +M+ + +P ++ + I
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI--------------- 253
N + +L+ + +++EM ++ + + TY Y K L+
Sbjct: 280 NGLSKKGELQQAKGLIQEM-AKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGV 338
Query: 254 -----------------DKASDVLKKAEERLEQK---DGIGYNFLISLYASLGNKSEVLR 293
K SD ++ + L++ D I YN LI + LGN E
Sbjct: 339 SPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFI 398
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
L D + + Y T+++ L +LG+ E A K+ ++ G D ++ G C
Sbjct: 399 LLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGAC 458
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
G + A+ ++++ G A ++ G G T + F+ + L+ KG+
Sbjct: 459 KLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLT-----KGF 513
Query: 414 KPDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNG 465
PD ++ L G++++ E +R + Y +F+ A++ NG
Sbjct: 514 PPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENG 566
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 145/371 (39%), Gaps = 14/371 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ Y ++ +AL+ + +M G++ + ++N IM + K G+ L++M
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
KN+ PD SY I + ++ I+L E+ + ++ + TY + +
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFR-NLSFNIVTYNTLIDGLCRLGD 427
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
++ A + + R D + Y L++ LGN +D Y
Sbjct: 428 LETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTA 487
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+ +KLG+ +A K+ +E G D N + G C G ++ A +L+ ++ G
Sbjct: 488 RIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDG 547
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
++ + + G G + LS +G P T ++ G
Sbjct: 548 HVPDHVTYTSFMHAHMENGHLREGREIFYDMLS-----RGQTPTVVTYTVLIHAHALNGR 602
Query: 433 VQDVEAFVAAL--RTVIPMNRQMYHAFIKA--NIRNGKGVDELLDSMKADGIDEDEETKE 488
+ A+ + + V+P N Y+ I +R + M+ GI ++ T
Sbjct: 603 LDWAMAYFLEMQEKGVVP-NVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYT 661
Query: 489 ILV---CTMEK 496
IL+ C M K
Sbjct: 662 ILINENCNMGK 672
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY L++ + + D A+++F +M+E G+ + +TYN ++ + K + ++
Sbjct: 586 TVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFF 645
Query: 190 TEMKAKNIFPDNFSYRICIN 209
EM+ K IFP+ ++Y I IN
Sbjct: 646 IEMQEKGIFPNKYTYTILIN 665
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 69/163 (42%), Gaps = 1/163 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +N + ++A +KM G +TY M + + G + ++ +M
Sbjct: 519 TYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDM 578
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ P +Y + I+++ L+ EM+ + +V + TY + + K
Sbjct: 579 LSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEK-GVVPNVITYNVLINGFCKVRK 637
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
+D+A + +E+ + Y LI+ ++G E LRL+
Sbjct: 638 MDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLY 680
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N + + R+ D+A F +M+E GI + TY ++ G++++ + +M
Sbjct: 624 TYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQM 683
Query: 193 KAKNIFPDNFSY 204
K I PD+ ++
Sbjct: 684 LGKRIRPDSCTH 695
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 162/431 (37%), Gaps = 77/431 (17%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E T Y +L++ Y R ++ALS RKMKE GI +S +TY+ ++ ++K E
Sbjct: 321 EPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADH 380
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP--------HIVLDWST 239
E K ++ + Y I ++ ++ E ++REME + H ++D T
Sbjct: 381 WFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYT 440
Query: 240 --------------------------YASAAHFYIKANLIDKASDVLKKAE--------- 264
Y + YIK + KA +V K E
Sbjct: 441 IIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMK 500
Query: 265 ---------ERLEQ------------KDGIG-----YNFLISLYASLGNKSEVLRLWDLE 298
RL+ KDG+ YN +I + +GN +R
Sbjct: 501 TYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEM 560
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
+ R R ++ ++ + G+ A ++ SG NA+I+G +
Sbjct: 561 QKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQM 620
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
+ A IL+++ G + +++ + GY G T + F+ ++ +G + D
Sbjct: 621 EKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTK-----LKTEGLELDVY 675
Query: 419 VITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDELLDSM 475
++L G +Q A + + IP N +Y+ I R G EL+ M
Sbjct: 676 TYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQM 735
Query: 476 KADGIDEDEET 486
K +G+ D T
Sbjct: 736 KQEGVQPDIHT 746
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 112/240 (46%), Gaps = 22/240 (9%)
Query: 62 VGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLS----- 116
V +I L ++ + +A+E+ D M+ GI +P +H + HG+ S
Sbjct: 604 VHTFNALILGLVEKCQMEKAVEILDEMSLAGI---SPNEHTYTTIM----HGYASLGDTG 656
Query: 117 -AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A YF+ LK + E TY ALL + + AL+ R+M I +T YN ++
Sbjct: 657 KAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILI 716
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---Q 230
+++ G + +++ +MK + + PD +Y IN+ D++ ++EME +
Sbjct: 717 DGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVK 776
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
P+I TY + H + +A+L +KA ++ + + D Y+ L++ S + +E
Sbjct: 777 PNI----KTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAE 832
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 14/258 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGF-------LSAESY 120
II + +ALE+ D M G C+ P H ++G V + E
Sbjct: 575 IIHGFARSGDMRRALEIFDMMRWSG-CI--PTVHTFNALILGLVEKCQMEKAVEILDEMS 631
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+ + +E TY T +++ Y T KA +F K+K G+ L TY ++ K+G
Sbjct: 632 LAGISPNEHTYTT---IMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSG 688
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ + V EM ++ I + F Y I I+ + R D+ ++++M+ Q + D TY
Sbjct: 689 RMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK-QEGVQPDIHTY 747
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
S + KA + +A+ +++ E + + Y LI +A + L+ + K+
Sbjct: 748 TSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKS 807
Query: 301 ACKRYINRDYITMLEALM 318
A + Y ++ +L+
Sbjct: 808 AGLKPDKAVYHCLMTSLL 825
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/405 (17%), Positives = 160/405 (39%), Gaps = 56/405 (13%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ Y +K L F ++KE G S ++Y ++ LY K G+ K +V M+
Sbjct: 432 YHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMME 491
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKA 250
I + +Y + IN + D + ++ +P +VL Y + +
Sbjct: 492 VAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVL----YNNIIRAFCGM 547
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK-TACKRYINRD 309
+D+A +K+ ++ + + +I +A G+ L ++D+ + + C ++
Sbjct: 548 GNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVH-T 606
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY----------------- 352
+ ++ L++ + E+A ++L E L+G S + ++ GY
Sbjct: 607 FNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLK 666
Query: 353 ------------------CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
C +G +Q+A A+ ++ + + ++ G+
Sbjct: 667 TEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGW-----AR 721
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-----EAFVAALRTVIPM 449
RG A L ++ +G +PD TS ++ G +Q E V ++ I
Sbjct: 722 RGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKT 781
Query: 450 NRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCTM 494
+ H + +A++ + + MK+ G+ D+ L+ ++
Sbjct: 782 YTTLIHGWARASL--PEKALKCFQEMKSAGLKPDKAVYHCLMTSL 824
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 137/352 (38%), Gaps = 50/352 (14%)
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVL 235
Y++ G M+A+ I P + Y I++Y D+E +R+M+ + I +
Sbjct: 299 YARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEE-GIEM 357
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLE--------------------------- 268
TY+ + K + A K+A+ER
Sbjct: 358 SLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALV 417
Query: 269 ---QKDGIG-----YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKL 320
+++GI Y+ ++ Y +GN+ + L ++D K Y ++ +K+
Sbjct: 418 REMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKI 477
Query: 321 GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
G+ +A +V K E++G ++ + + +I G+ NA A+ ED+V+ G +
Sbjct: 478 GKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLY 537
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ------ 434
+ + G +R + +K ++ + +P + I+ G ++
Sbjct: 538 NNIIRAFCGMGNMDRAIRTVKE-----MQKERHRPTTRTFMPIIHGFARSGDMRRALEIF 592
Query: 435 DVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEET 486
D+ + + TV N + K + K V E+LD M GI +E T
Sbjct: 593 DMMRWSGCIPTVHTFNALILGLVEKCQME--KAV-EILDEMSLAGISPNEHT 641
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 178/403 (44%), Gaps = 28/403 (6%)
Query: 105 LDLIGRVHGFLSAESYFSNLKD---------DEKTYQTYGALLNCYVRQRQTDKALSHFR 155
++L+ R+ G S S S L D D + Y T +L+ Y R + +A+ F
Sbjct: 184 VELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTT---ILHAYARSGKYKRAIDLFD 240
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQ-YEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR 214
KM+ +G+ + +TYN ++ +Y K G+ + ++ ++L EM++K + D F+ I++ G
Sbjct: 241 KMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGRE 300
Query: 215 SDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
L+ L E++ +P V+ Y S + KA + +A +LK+ E+ D
Sbjct: 301 GMLDEARKFLAELKLNGYKPGTVM----YNSMLQVFGKAGIYTEALSILKEMEDNNCPPD 356
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
I YN L + Y G E + + D + Y T+++A K G ++A ++
Sbjct: 357 SITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFS 416
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+ + G + + N+V+ ++ +L ++ G A +W + A + G
Sbjct: 417 KMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEG 476
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS-VQDVEAFVAALRTVIPMN 450
K + ++ ++ G++PD +++S GS V + + +++
Sbjct: 477 KHNYVNKVLRE-----MKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPC 531
Query: 451 RQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
Y+A + A G K + ++ M+ G +E + +L+
Sbjct: 532 VTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLL 574
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 146/327 (44%), Gaps = 16/327 (4%)
Query: 105 LDLIGRVHGFLSAESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
L + G+ + A S ++D+ TY L YVR D+ ++ M G+
Sbjct: 329 LQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGV 388
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+ +TY ++ Y K G+ + + ++MK P+ ++Y + G +S E +
Sbjct: 389 MPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIK 448
Query: 223 ILREME---SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+L EM+ P+ W+T + K N ++K VL++ + + D +N LI
Sbjct: 449 VLCEMKLNGCAPNRA-TWNTMLAVCSEEGKHNYVNK---VLREMKNCGFEPDKDTFNTLI 504
Query: 280 SLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
S YA G++ + +++ ++ K+ + Y +L AL G+ + AE V+++ + G
Sbjct: 505 SSYARCGSEVDSAKMYGEMVKSGFTPCVTT-YNALLNALAHRGDWKAAESVIQDMQTKGF 563
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ + ++ Y G V+ E + +++ + SW ++ K R +
Sbjct: 564 KPNETSYSLLLHCYSKAGNVRGIEKVEKEIYD---GQVFPSWILLRTLVLSNHKC-RHLR 619
Query: 399 CMKAALSVYVEGKGWKPDPKVITSILS 425
M+ A ++ G+KPD VI S+LS
Sbjct: 620 GMERAFD-QLQKYGYKPDLVVINSMLS 645
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 115/263 (43%), Gaps = 7/263 (2%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E T+ L++ Y R + + +M + G TYN ++ + G ++
Sbjct: 494 EPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAES 553
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAA 244
V+ +M+ K P+ SY + ++ Y ++ G+E + +E+ + P +L T +
Sbjct: 554 VIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWIL-LRTLVLSN 612
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
H +++A D L+K + D + N ++S+++ S+ + +
Sbjct: 613 HKCRHLRGMERAFDQLQKYGYK---PDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQ 669
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y +++ ++ E +AE+VLK + S D N VI G+C GL+Q A +
Sbjct: 670 PNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRV 729
Query: 365 LEDLVEKGKATTPNSWAVVAAGY 387
L ++ KG T ++ +GY
Sbjct: 730 LSEMTTKGIQPTIVTYNTFLSGY 752
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 107/270 (39%), Gaps = 13/270 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ALLN + A S + M+ G + +Y+ ++ YSK G + V E+
Sbjct: 534 TYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEI 593
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+FP R + S L GME +++ +P +V+ S + +
Sbjct: 594 YDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVV----INSMLSMFSR 649
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ KA ++L E Q + YN L+ LY + E + ++ K D
Sbjct: 650 NKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYV---REDECWKAEEVLKGIQNSVPEPD 706
Query: 310 ---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y T+++ + G +EA +VL E G N + GY L A ++
Sbjct: 707 VVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIR 766
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
++E + ++ ++ GY AGK E
Sbjct: 767 FMIEHNCRPSELTYKILVDGYCKAGKHEEA 796
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 146/372 (39%), Gaps = 60/372 (16%)
Query: 76 KRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT-- 133
+ + + LE+ D M KG+ F + + GR A + + LK + T
Sbjct: 266 RSWGRILELLDEMRSKGL-EFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVM 324
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y ++L + + +ALS ++M++ ++TYN++ Y + G ++ V+ M
Sbjct: 325 YNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMT 384
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+K + P+ +Y I++YG KA
Sbjct: 385 SKGVMPNAITYTTVIDAYG------------------------------------KAGRE 408
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN------ 307
D A + K ++ + YN S+ A LG KS R D+ K C+ +N
Sbjct: 409 DDALRLFSKMKDLGCAPNVYTYN---SVLAMLGKKS---RTEDVIKVLCEMKLNGCAPNR 462
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
+ TML + G+H KVL+E + G D N +I Y G ++ + +
Sbjct: 463 ATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGE 522
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSILS 425
+V+ G ++ + G KAA SV ++ KG+KP+ + +L
Sbjct: 523 MVKSGFTPCVTTYNALLNALAHRGD-------WKAAESVIQDMQTKGFKPNETSYSLLLH 575
Query: 426 KLGDEGSVQDVE 437
G+V+ +E
Sbjct: 576 CYSKAGNVRGIE 587
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ YVR+ + KA + ++ ++YN ++ + + G ++ VL+EM
Sbjct: 674 TYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEM 733
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILR---EMESQPHIVLDWSTYASAAHFYIK 249
K I P +Y ++ Y + ++R E +P + TY Y K
Sbjct: 734 TTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSEL----TYKILVDGYCK 789
Query: 250 ANLIDKASDVLKKAEE 265
A ++A D + K +E
Sbjct: 790 AGKHEEAMDFVTKIKE 805
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 151/357 (42%), Gaps = 14/357 (3%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y ++++ Y + ++A + M+E G+ + YN +M Y++ + +V ++K
Sbjct: 231 YSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLK 290
Query: 194 AK---NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
A+ + P +Y IN Y + +EM++Q I L+ +TY+ Y++
Sbjct: 291 ARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQ-GITLNRNTYSMLVDGYVQL 349
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT-ACKRYINRD 309
A V + E + D + YN L+ + + ++L KT C I +
Sbjct: 350 GDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTI-QT 408
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
YIT+++ MK G+ A K + E +L+G + N ++ G + A ++++++
Sbjct: 409 YITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEME 468
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G S+ + G+ G+ F+C+K + KP S+L
Sbjct: 469 LAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEI-----TQKPPIISYASLLKACCK 523
Query: 430 EGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVDE--LLDSMKADGIDED 483
G +Q+ A + +PMN +++ + + G + ++ M+ +G D
Sbjct: 524 AGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPD 580
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 140/316 (44%), Gaps = 19/316 (6%)
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
D+ + Y L++ Y ++ A F KM+ GI S YN+++ Y +
Sbjct: 119 DKAVERDYALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAV 178
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDW----STYAS 242
+ EM+ + IFP+ ++ I+ YG+ ++E E + S+ +W + Y+S
Sbjct: 179 SCVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSE-----NWNHNVAIYSS 233
Query: 243 AAHFYIKANLIDKASDVLKKAEER-LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
H Y KA +++A ++ EE+ LE G+ YN L+ YA +++ L ++ K
Sbjct: 234 IIHAYCKAGNMERAEALVADMEEQGLEATLGL-YNILMDGYARCHIEAQCLNVFHKLKAR 292
Query: 302 CKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
++ +T ++ KLG+ +A + KE + G + + + ++ GY G
Sbjct: 293 IDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDF 352
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
NA ++ ED+ E G ++ ++ + + + R Q + ++ +G P +
Sbjct: 353 ANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGR-----MKTRGCSPTIQ 407
Query: 419 VITSILSKLGDEGSVQ 434
+I+ G V+
Sbjct: 408 TYITIIDGFMKTGDVR 423
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 152/365 (41%), Gaps = 25/365 (6%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTY 131
K + +ALE M +GI +++ +D ++ F +A S F ++ + E +
Sbjct: 313 KLGKMMKALEFCKEMKAQGI-TLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDW 371
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TY LL + + RQ +A+ +MK G + + TY I+ + KTG ++E
Sbjct: 372 VTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSE 431
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYI 248
MK P+ +Y + +++ ++ ++ EME QP ++ +Y + +
Sbjct: 432 MKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQP----NFRSYTTLMQGFA 487
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
I A LK+ E ++ I Y L+ G + + + A N
Sbjct: 488 SIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNY 547
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
+ T+L+ + G+ EA ++++ G + D + + C G +Q A +E++
Sbjct: 548 IFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEM 607
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQC---MKAALSVYVEGKGWKPDPK----VIT 421
++ ++ ++ G+ E+ C MKAA G PD ++T
Sbjct: 608 KQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAA--------GLIPDKPLYYCIVT 659
Query: 422 SILSK 426
S+LSK
Sbjct: 660 SLLSK 664
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 113/295 (38%), Gaps = 49/295 (16%)
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA--SAAHFYIKANLIDKASDVLK 261
Y + I+ YG R D G + +M + +D S +A + YI A + A ++
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAG---IDSSVHAYNNLIRAYIMAQNLQGAVSCVE 182
Query: 262 KAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLG 321
+ E + ++ +IS Y S GN A +++ R
Sbjct: 183 EMEIEGIFPNAATFSAIISGYGSSGNVE-----------AAEKWFQRS------------ 219
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
V + W +++ I +++I YC G ++ AEA++ D+ E+G T +
Sbjct: 220 -------VSENW-----NHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYN 267
Query: 382 VVAAGYFDAGKTERGFQCMKA--ALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
++ GY + QC+ L ++ G P +++ G + F
Sbjct: 268 ILMDGY---ARCHIEAQCLNVFHKLKARID-TGLSPTAVTYGCLINLYTKLGKMMKALEF 323
Query: 440 VAALRTV-IPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
++ I +NR Y + ++ G + + + M GI+ D T IL+
Sbjct: 324 CKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILL 378
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E + Y +L++ Y R ++AL RKMKE GI ++ +TY+ I+ ++K G+ +
Sbjct: 306 EPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADH 365
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
E K K + +Y I ++ +++ E ++REME Q I Y + Y
Sbjct: 366 WFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQ-GIDAPIDIYHTMMDGY 424
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
+K V + +E I Y LI+LY +G S+ L++ + K + ++
Sbjct: 425 TMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNM 484
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
+ Y ++ +KL + A V +++ G D + N +I +C + A +++
Sbjct: 485 KTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQ 544
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ ++ T ++ + G+ AG+ R +
Sbjct: 545 MQKERYRPTTRTFLPIIHGFARAGEMRRALE 575
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 148/376 (39%), Gaps = 11/376 (2%)
Query: 116 SAESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
+A+ +F K+ + TYG+++ + + D+A + R+M+ GI Y+ +M
Sbjct: 362 AADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMM 421
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
Y+ G EK V +K P SY IN Y + + + +M I
Sbjct: 422 DGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVS-KALQISKMMKMSGI 480
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
+ TY+ + ++K A V + + + D + YN +I+ + + N +
Sbjct: 481 KHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAIC 540
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
+ + R R ++ ++ + GE A ++ SG NA+I+G
Sbjct: 541 MVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLV 600
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
+ A AIL+ + G +++ + GY G TE+ FQ + +G
Sbjct: 601 EKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSV-----LRNEGL 655
Query: 414 KPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDE 470
+ D ++L G +Q A + IP N +Y+ I R G +
Sbjct: 656 EIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAAD 715
Query: 471 LLDSMKADGIDEDEET 486
L+ M+ +G+ D T
Sbjct: 716 LMQQMRKEGVLPDIHT 731
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 14/258 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY------- 120
II + +ALE+ D M R G C+ P H ++G V A++
Sbjct: 560 IIHGFARAGEMRRALEIFDMMRRSG-CI--PTVHTYNALILGLVEKRKMAKAVAILDQMN 616
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+ + +E TY T L+ Y T+KA +F ++ G+ + TY ++ K+G
Sbjct: 617 VAGVGPNEHTYTT---LMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSG 673
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ + V EM AKNI + F Y I I+ + R D+ ++++M + ++ D TY
Sbjct: 674 RMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKE-GVLPDIHTY 732
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
S + KA + KA++++++ E + + Y LI+ +A + L ++ K
Sbjct: 733 TSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKL 792
Query: 301 ACKRYINRDYITMLEALM 318
A + Y ++ +L+
Sbjct: 793 AELKPDKAAYHCLMTSLL 810
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 156/368 (42%), Gaps = 20/368 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG L+ + DKA+ +M E GI + + Y+ ++ Y K+G++E V V EM
Sbjct: 152 TYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM 211
Query: 193 KAKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
K I PD Y I+S G G+ ++ +P++V TY + K
Sbjct: 212 SEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVV----TYNVLINCMCK 267
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ +A VLKK E+ D + YN LI + + E +W LE+ + I +
Sbjct: 268 EGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA--MWLLEEMVRGKNIVKP 325
Query: 310 YI----TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+ ++++ L +G +A +V E +G + N +I G V+ A ++
Sbjct: 326 NVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELM 385
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+++ G +++++ G+ + +R + + +G +P+ +L
Sbjct: 386 DEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST-----MRDRGIEPELFHYIPLLV 440
Query: 426 KLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
+ ++G ++ + P++ Y I + G K ELL S+ +G+ D
Sbjct: 441 AMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPD 500
Query: 484 EETKEILV 491
T I++
Sbjct: 501 AVTYSIVI 508
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 141/325 (43%), Gaps = 19/325 (5%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E TY L+NC ++ +A+ +KM E G+A +TYN ++ S + ++
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311
Query: 188 VLTEM-KAKNIF-PDNFSYRICINSYGARSDLEGME--IILREMESQPHIVLDWSTYASA 243
+L EM + KNI P+ ++ I D+ M +R M + +++ TY
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGL---CDIGRMRQAFQVRAMMEETGCMVNLVTYNLL 368
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
++ + + KA +++ + + D Y+ LI + + +V R DL T
Sbjct: 369 IGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMW---QVDRAEDLLSTMRD 425
Query: 304 RYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
R I + YI +L A+ + G E A + E + + D + +I G C G ++
Sbjct: 426 RGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKT 484
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
A+ +L+ +V++G ++++V + +G E +K + G+ PD V
Sbjct: 485 AKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLK-----QMTASGFLPDVAVF 539
Query: 421 TSILSKLGDEGSVQDVEAFVAALRT 445
S++ +G + V + + T
Sbjct: 540 DSLIQGYSTKGEINKVLELIREMIT 564
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 102/242 (42%), Gaps = 37/242 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ +R + KA+ +M +G+ + TY+ ++ + K Q ++ D+L+ M
Sbjct: 364 TYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM 423
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + I P+ F Y + + + +E + EM++ + LD Y++ H KA
Sbjct: 424 RDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN--NFPLDVVAYSTMIHGACKAGD 481
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A ++LK + D + Y+ +I+++A
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFA----------------------------- 512
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
K G+ E A VLK+ SG D + +++I GY G + ++ +++ K
Sbjct: 513 ------KSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKN 566
Query: 373 KA 374
A
Sbjct: 567 IA 568
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 89/230 (38%), Gaps = 15/230 (6%)
Query: 270 KDGIGYNFLISLYASLGNK---SEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+D + YN +++ G+ +LR LE R Y ++ AL ++A
Sbjct: 75 RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
+L+ +G D +I G C+ V A ++ ++ E G ++ + G
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
Query: 387 YFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAFV-AAL 443
Y +G+ E + V+VE KG +PD + T ++ L G + + +
Sbjct: 195 YCKSGRWEDVGK-------VFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247
Query: 444 RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
R + N Y+ I + G K +L M G+ D T L+
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 161/400 (40%), Gaps = 48/400 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ ++ + D A+ FR M TY +M K + ++ +L EM
Sbjct: 201 TFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEM 260
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ FP ++ + IN + DL ++ M + I + TY + H
Sbjct: 261 QIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIP-NEVTYNTLIHGLCLKGK 319
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLG---NKSEVLRLWDLEKTACKRYINRD 309
++KA +L + + + Y +I+ G + + VL L + Y+
Sbjct: 320 LEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYV--- 376
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T++ L K G+ +EA + KE + G +T + +AVI G C +G +A +L ++
Sbjct: 377 YSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMT 436
Query: 370 EKGKATTPNSWAV--VAAGYFDAGKTERGFQC---------------------------- 399
KG TPN++ + G+F+AG + R +
Sbjct: 437 NKG--CTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGK 494
Query: 400 MKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ---MY 454
+K A+ V+ + GKG KPD +S+++ L G V+D + P ++ Y
Sbjct: 495 VKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTY 554
Query: 455 HAFIKANIRN---GKGVDELLDSMKADGIDEDEETKEILV 491
+ + + + +D LL+SM G D D T I +
Sbjct: 555 NILLNTLCKQSSISRAID-LLNSMLDRGCDPDLVTCTIFL 593
>gi|242062404|ref|XP_002452491.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
gi|241932322|gb|EES05467.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
Length = 468
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 152/385 (39%), Gaps = 46/385 (11%)
Query: 70 RDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDL--IGRVHGFLSAESYFSNLKDD 127
R LR+ + + + + D ++ I A HA+ L + F AE+ S+
Sbjct: 44 RQLRRERDPDRVVSILDAIDTASISA-ASTRHALSLAARRLSLSRRFAEAEALLSSHLTA 102
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRK-MKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
T A+L CY +KA+ FR + +S L +N ++ + + +Y +VP
Sbjct: 103 SNTETHLAAVLCCYAAANLPEKAIDAFRSAAPSLPAPISPLPFNALLSTFVRCRRYRRVP 162
Query: 187 DVLTEM-KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
+ E+ K +I PD SY I + +Y D + +L M Q I S Y S
Sbjct: 163 VLFAELSKEFSITPDATSYAILVKAYCMNRDDAKAKQVLDLMREQ-GISPTASIYTSLID 221
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
K + ++A + K+ E + D + YN Y + G EV+
Sbjct: 222 SMYKRKMTNEAESLWKEMVESGCEPDVVTYNVKALYYMAHGKPEEVI------------- 268
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+V+ E E +G +T N ++I YC +G +++A+ +
Sbjct: 269 ----------------------EVMTEMEAAGLKPNTITYNYLMISYCKSGKLEDAKVLY 306
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
L EKG + ++ + A G + G K +L K PD + + ++
Sbjct: 307 HSLAEKGCSADAYTYKHMLAELCAHGDFDAGLGIFKDSLK-----KRKVPDFRTMKRLVE 361
Query: 426 KLGDEGSVQDVEAFVAALRTVIPMN 450
L G V D + +A ++ + P N
Sbjct: 362 GLAKGGRVADAKEVIAEVKNMFPEN 386
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 133/314 (42%), Gaps = 9/314 (2%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSN 123
+L ++ LR K++ L + W+ + + +D GR + AE+ +
Sbjct: 114 DLINVVVQLRLNKKWDLILLICQWILYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFE 173
Query: 124 LKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
L + T TY LL Y +KA + F +M++ G+ S + YN + K G
Sbjct: 174 LIEARCIPTEDTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGN 233
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWS 238
++ ++ MK P +Y + IN +G S + EM SQ P+I
Sbjct: 234 PQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNIC---- 289
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
TY + + + + L +KA ++ ++ +E + D YN L+ Y+ G ++ L
Sbjct: 290 TYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLM 349
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
+ Y M++A + G HE+A+ V +E + G + + ++ Y G V
Sbjct: 350 QHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDV 409
Query: 359 QNAEAILEDLVEKG 372
E I+ +L E G
Sbjct: 410 AKCEDIVNELHESG 423
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 146/389 (37%), Gaps = 52/389 (13%)
Query: 69 IRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE 128
I L K +A+E+ M R C + + + ++L G+ A F+ ++ +
Sbjct: 225 IDGLMKAGNPQRAVEIFQRMKRD-CCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQK 283
Query: 129 --KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
TY AL+N + R+ +KA F +++E G YN +M YS+ G
Sbjct: 284 CKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAA 343
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
++ + M+ PD SY I +++YG E + + EM+ + I ++
Sbjct: 344 EIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMK-RLGITPTMKSHMLLLSA 402
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y KA + K D++ + E + D N +++LY
Sbjct: 403 YSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLNLYG----------------------- 439
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+LG+ + E+VL E + D N +I Y G + E + +
Sbjct: 440 ------------RLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQ 487
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSIL 424
L K +W Y + + +C L ++ E G PD + +L
Sbjct: 488 SLAAKNLKPDVVTWTSRLGAY---SRKKLYTKC----LEIFEEMIDAGCHPDGRTAKVLL 540
Query: 425 SKLGDEGSVQDVEAFVAALR----TVIPM 449
S E ++ V + + TV+P+
Sbjct: 541 SSCSSEDQIEQVTTVIRTMHKNMETVLPV 569
>gi|162460162|ref|NP_001106062.1| pentatricopeptide repeat 5 [Zea mays]
gi|154520281|gb|ABS82814.1| pentatricopeptide repeat protein 5 [Zea mays]
gi|413924537|gb|AFW64469.1| pentatricopeptide repeat 5 [Zea mays]
Length = 499
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 136/332 (40%), Gaps = 54/332 (16%)
Query: 45 RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN--------------- 89
R+ P LD V+ VR + +L +R + Q L+V WM
Sbjct: 74 RLVPVLDRHVR---VVRTEHCFLLFEELGRRDAWLQCLDVFRWMQKQRWYVADNGIYSKL 130
Query: 90 -----RKGICVFA----------PC--DHAVQLDLIG-------RVHGFLSAESYFSNLK 125
RKG A C D +V LIG + A YF +K
Sbjct: 131 ISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKTKALAKALGYFEKMK 190
Query: 126 DDEK---TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
E+ T TY LL + + T + F+ + E ++ TYN ++ Y K G
Sbjct: 191 CIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMI 250
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII----LREMESQPHIVLDWS 238
+++ VL MK+ PD ++ I I+SYG + + ME + LR E H
Sbjct: 251 KEMESVLVRMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTH-----P 305
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
T+ S Y +A L +KA V++K EE + + + LI +YA S+ +++D
Sbjct: 306 TFNSMITNYGRARLREKAESVVEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQVFDEL 365
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
T+ + +MLEA G H EA+++L
Sbjct: 366 VTSQTKVHLSSLNSMLEAYCMNGLHTEADRLL 397
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 142/350 (40%), Gaps = 19/350 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++NC + Q ++A +M + G T+N ++ + E+ D+ ++
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PD +++ I IN+ D + EM++ D TY +
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS-GCTPDEVTYNTLIDNLCSLGK 441
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYAS---LGNKSEVLRLWDLEKTACKRYINRD 309
+ KA D+LK E + I YN +I + EV DL+ I+R+
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG------ISRN 495
Query: 310 YI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
I T+++ L K + ++A ++ + G + N+++ YC G ++ A ILE
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ G ++ + G AG+T+ + ++ + KG +P PK +L
Sbjct: 556 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG-----MRIKGMRPTPKAYNPVLQS 610
Query: 427 LGDEGSVQDVEAFVAALRTVI-PMNRQMYHAFIKANIRNGKGVDELLDSM 475
L +++D + + V P + Y + R G + E D M
Sbjct: 611 LFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFM 660
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 120/299 (40%), Gaps = 11/299 (3%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKE--MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L+ Y Q+ D A+ + GI T+ YN ++ + + + + + V +EM
Sbjct: 114 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 173
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
A+ I PD ++ + + + ++L EM S+ + D +T+ + +++ I
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSR-GVAPDETTFTTLMQGFVEEGSI 232
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
+ A V + E + N LI+ Y LG + L E Y T
Sbjct: 233 EAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTF 292
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
+ L + A KV+ G+ D N V+ C NG ++ A+ IL +V++G
Sbjct: 293 VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP---KVITSILSKLGD 429
++ + A + E L+ V KG PD ++ + L K+GD
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALD-----LARQVTVKGVSPDVYTFNILINALCKVGD 406
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 85/220 (38%), Gaps = 18/220 (8%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFS--NLK 125
+I +L + +AL++ M G C + + +D + + AE F +L+
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTG-CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+ T+ L++ + ++ D A +M G+ + +TYN I+ Y K G +K
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSY--GARSD-----LEGMEIILREMESQPHIVLDWS 238
D+L M A D +Y IN R+ L GM I + M P
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI--KGMRPTP------K 602
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
Y + N I A + ++ E E D + Y +
Sbjct: 603 AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIV 642
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 134/305 (43%), Gaps = 21/305 (6%)
Query: 109 GRVHGFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
GRVH L A F ++D + T ++Y + + V + +A+ +++M+E GI +
Sbjct: 96 GRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTV 155
Query: 167 LTYNDIMCLYSKTGQ-YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
++ N ++ K + E + EM + PD+++Y IN + + +L
Sbjct: 156 VSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLD 215
Query: 226 EMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
EME + P +V +Y S H ++N +D+A ++L++ + + Y+ L+
Sbjct: 216 EMEEKGLSPSVV----SYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGL 271
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINR--DYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
G+ S+ + L LE +R + Y T++ L K G+H EA ++L L G
Sbjct: 272 CKSGHSSQAMEL--LEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKP 329
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA-------VVAAGYFDAGKT 393
D + +I G C Q A ++++ G + SW +V G +
Sbjct: 330 DAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDP 389
Query: 394 ERGFQ 398
R FQ
Sbjct: 390 TRAFQ 394
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 166/365 (45%), Gaps = 17/365 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ + + AL+ F +M GI + +TYN ++ G++ +L++M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ I P+ ++ I+++ L E + EM + I D TY+S + + + +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRL 376
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI---NRDY 310
D+A + + + + + YN LI + E + L+ + +R + Y
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF---REMSQRGLVGNTVTY 433
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T+++ L + G+ + A+K+ K+ G D + ++ G C G ++ A + E L +
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
++ ++ G AGK E G+ + +LS+ KG KP+ + T+++S +
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWD-LFCSLSL----KGVKPNVIIYTTMISGFCRK 548
Query: 431 GSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEET 486
G ++ +A ++ +P N Y+ I+A +R+G EL+ M++ G D T
Sbjct: 549 GLKEEADALFREMKEDGTLP-NSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 607
Query: 487 KEILV 491
+++
Sbjct: 608 ISMVI 612
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 128/307 (41%), Gaps = 42/307 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMG-----IALSTLT--------YNDIMCLYSKT 179
+Y L+NC+ R+ Q AL+ KM ++G + LS+L ++ + L +
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 180 GQYEKVPDVLT----------------------EMKAKNIFPDNFSYRICINSYGARSDL 217
E P+ +T M A+ PD F+Y +N R D+
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
+ +L++ME + I D Y + ++ A ++ + + + + + + YN
Sbjct: 237 DLALSLLKKME-KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWE 334
LI + G S+ RL +R IN + +T +++A +K G+ EAEK+ E
Sbjct: 296 LIRCLCNYGRWSDASRLL---SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
D +++I G+C + + A+ + E ++ K ++ + G+ A + E
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 395 RGFQCMK 401
G + +
Sbjct: 413 EGMELFR 419
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 124/300 (41%), Gaps = 19/300 (6%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+D +VK G V E +++ ++ KR S +N G C+ D A +
Sbjct: 332 IDAFVKEGKLV---EAEKLYDEMIKRSIDPDIFTYSSLIN--GFCMHDRLDEAKHM---- 382
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+ ++ F N+ TY L+ + + ++ ++ + FR+M + G+ +T+TY
Sbjct: 383 --FELMISKDCFPNV-------VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ + G + + +M + + PD +Y I ++ LE ++ ++
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ- 492
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + D TY KA ++ D+ + + + I Y +IS + G K
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
E L+ K + Y T++ A ++ G+ + +++KE G D + VI
Sbjct: 553 EADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 127/323 (39%), Gaps = 49/323 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ ++ + A + F +M GI + T+N I+ K G+ + D L
Sbjct: 503 TYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTF 562
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIV--------------- 234
++ P + +Y I+ Y ++ E + REM E P+++
Sbjct: 563 IKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKM 622
Query: 235 ----------------LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
LD + YA+ + K ++ A K E + I YN +
Sbjct: 623 DLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIM 682
Query: 279 ISLYASLGNKSEVLRLWDL---EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
IS Y +L N L L K C I Y ++++ L+K G+ A + E
Sbjct: 683 ISAYRNLNNMEAALNLHKEMINNKIPCDLKI---YTSLIDGLLKEGKLSFALDLYSEMLC 739
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS--WAVVAAGYFDAGKT 393
G D + N +I G CN+G ++NA IL+++ G TP + + AG+F G
Sbjct: 740 RGIVPDIFMYNVLINGLCNHGQLENAGKILKEM--DGNNITPTVLLYNTLIAGHFKEGNL 797
Query: 394 ERGFQCMKAALSVYVEGKGWKPD 416
+ F+ L KG PD
Sbjct: 798 QEAFRLHDEMLD-----KGLVPD 815
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 146/343 (42%), Gaps = 23/343 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L + ++A + + KM GI S ++YN ++ + K G + +V+ +
Sbjct: 433 TYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGI 492
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P+ +Y I + + D E + +M + + D+ T+ S + K
Sbjct: 493 IESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDY-TFNSIINGLCKVGR 551
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ +A D L ++ + YN +I Y G ++ + C+ I+ + IT
Sbjct: 552 VSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVY---REMCRSEISPNVIT 608
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
++ K + + A K+ + + G D + +I G+C ++NA L+
Sbjct: 609 YTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLL 668
Query: 370 EKGKATTPNS--WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK--PDPKVITSILS 425
E G TPN+ + ++ + Y R M+AAL+++ E K D K+ TS++
Sbjct: 669 EVG--LTPNTIVYNIMISAY-------RNLNNMEAALNLHKEMINNKIPCDLKIYTSLID 719
Query: 426 KLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGK 466
L EG + + + R ++P + MY+ I +G+
Sbjct: 720 GLLKEGKLSFALDLYSEMLCRGIVP-DIFMYNVLINGLCNHGQ 761
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 14/187 (7%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG---RVHGFLSAESYFSNL 124
+I K + AL++ D M RKG+ D V LI ++ +A +FS L
Sbjct: 612 LINGFCKSNKMDLALKMHDDMKRKGL----ELDITVYATLIAGFCKMQDMENACKFFSKL 667
Query: 125 KDDEKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
+ T T Y +++ Y + AL+ ++M I Y ++ K G+
Sbjct: 668 LEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKL 727
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWST 239
D+ +EM + I PD F Y + IN LE IL+EM+ P ++L ++T
Sbjct: 728 SFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLL-YNT 786
Query: 240 YASAAHF 246
A HF
Sbjct: 787 LI-AGHF 792
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 82/406 (20%), Positives = 151/406 (37%), Gaps = 57/406 (14%)
Query: 117 AESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLY 176
AE Y L D + + LL YVR + +A+ FR M E G+ N ++
Sbjct: 142 AERYGFKLSDS----RVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAM 197
Query: 177 SKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE----MESQPH 232
+ E + EM + I+ D ++ ++ + R+ L+G + + E +
Sbjct: 198 IRRNMVEDAHRLFDEMAERRIYGDCYTLQVLM-----RACLKGGKFVEAERYFGQAAGRG 252
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
+ LD ++Y+ + + +D AS +++ EE Y +I LGN E L
Sbjct: 253 LKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEAL 312
Query: 293 RLWD------------LEKTACKRYINRD-----------------------YITMLEAL 317
RL D + + K Y R + ++E
Sbjct: 313 RLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWC 372
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
K+G E+A ++ + G I N ++ G+ L++NA +L+ VE G A+
Sbjct: 373 SKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVV 432
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV- 436
++ +V + GK + GKG P ++ +G + D
Sbjct: 433 -TYNIVLLWLCELGKVNEACNLWDKMI-----GKGITPSLVSYNHMILGHCKKGCMDDAH 486
Query: 437 EAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGI 480
E + + + N Y ++ + + G + + D M A GI
Sbjct: 487 EVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGI 532
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 133/308 (43%), Gaps = 13/308 (4%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDDE- 128
LR K++ + + +W+ K F P + + +D G+ + ES + L +
Sbjct: 129 LRLNKKWGPIILICEWIMNKS--TFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHC 186
Query: 129 -KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
T TY LL Y + +KA + F +M++ G++ S + YN + K G K +
Sbjct: 187 IPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVE 246
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAA 244
+ MK P +Y + IN YG S + I EM +Q P+I T+ +
Sbjct: 247 IFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNIC----TFTALV 302
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
+ + L +KA ++ ++ +E + D YN L+ Y+ G ++ L +
Sbjct: 303 NALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCE 362
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y M++A + G HE+A+ V +E + G + + ++ Y + G V E I
Sbjct: 363 PDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDI 422
Query: 365 LEDLVEKG 372
+ + + G
Sbjct: 423 IGQMHKSG 430
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 137/333 (41%), Gaps = 39/333 (11%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+D VK GN V+ A+E+ M R G C + + +++ G
Sbjct: 232 IDGLVKGGNNVK-------------------AVEIFHRMKRDG-CQPTTDTYTMLINVYG 271
Query: 110 RVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
+ A++ F ++ + T+ AL+N R+ +KA F +M+E G
Sbjct: 272 KESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVY 331
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
YN +M YS+ G ++ + M+ PD SY I +++YG E + + EM
Sbjct: 332 AYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEM 391
Query: 228 ES-------QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
+ + H++L S Y+SA + + K D++ + + + D N +++
Sbjct: 392 KRIGITPTMKSHMLL-LSAYSSAGN-------VAKCEDIIGQMHKSGLKPDTFVMNSMLN 443
Query: 281 LYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
LY LG ++ L+ ++K C+ I+ Y ++ + G E E++ +
Sbjct: 444 LYGRLGQFGKMEDLFSTMQKGPCRADIS-TYNILINVYGRAGFVERMEELFQLLPAKNLE 502
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
D + I Y L + + E +++ G
Sbjct: 503 PDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAG 535
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 105 LDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
L+L GR+ F E FS ++ TY L+N Y R ++ F+ + +
Sbjct: 442 LNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNL 501
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+T+ + YS+ Y++ ++ +M +PD + ++ +++ + +E +
Sbjct: 502 EPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTN 561
Query: 223 ILREME 228
++R M
Sbjct: 562 VVRTMH 567
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 137/309 (44%), Gaps = 13/309 (4%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
Y Y L+ + D L+ R+M+E+G ++ + ++C++++ G+ + +L
Sbjct: 201 AYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLL 260
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EMK+ + D Y +CI+ +G ++ E++SQ +V D T+ S K
Sbjct: 261 DEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQ-GLVPDDVTFTSMIGVLCK 319
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK-TACKRYINR 308
A +D+A ++ ++ + YN +I Y S+G +E L + +K C +
Sbjct: 320 AERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIA 379
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y +L L + G+ EEA ++L+ ++ T N +I C G ++ A + + +
Sbjct: 380 -YNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSY-NILIDMLCKAGELEAALKVQDSM 437
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSILSK 426
E G PN V K +R + A S++ ++ K PD S++
Sbjct: 438 KEAG--LFPN-IITVNIMIDRLCKAQR----LDEACSIFLGLDHKVCTPDSVTFCSLIDG 490
Query: 427 LGDEGSVQD 435
LG G V D
Sbjct: 491 LGRHGKVND 499
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 148/374 (39%), Gaps = 24/374 (6%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E T + L+ + R+ + D ALS +MK + YN + + K G+ +
Sbjct: 234 EVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWK 293
Query: 188 VLTEMKAKNIFPDN--FSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
E+K++ + PD+ F+ I + R D E +E + E++S + ++ Y +
Sbjct: 294 FFHELKSQGLVPDDVTFTSMIGVLCKAERVD-EAVE-LFEELDSNKSVPCVYA-YNTMIM 350
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
Y ++A +L++ + + I YN +++ G E LR+ + K
Sbjct: 351 GYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPN 410
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+ Y +++ L K GE E A KV + +G + N +I C + A +I
Sbjct: 411 LT-SYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIF 469
Query: 366 EDLVEKGKATTPNS--WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
L K TP+S + + G GK + + L G P+ V TS+
Sbjct: 470 LGL--DHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLD-----SGQTPNAVVYTSL 522
Query: 424 LSKLGDEGSVQDVEAFVAAL--RTVIP----MNRQMYHAFIKANIRNGKGVDELLDSMKA 477
+ G +D + R P +N M F I G+ L + +KA
Sbjct: 523 IRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRA---LFEEIKA 579
Query: 478 DGIDEDEETKEILV 491
G+ D + IL+
Sbjct: 580 QGLTPDVRSYSILI 593
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 146/365 (40%), Gaps = 18/365 (4%)
Query: 77 RFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK-DDEKTYQTYG 135
+F++A + + RKG C+ + + L +GR A +K D +Y
Sbjct: 357 KFNEAYSLLERQKRKG-CIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYN 415
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
L++ + + + AL MKE G+ + +T N ++ K + ++ + + K
Sbjct: 416 ILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHK 475
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIKANL 252
PD+ ++ I+ G + ++ +M P+ V+ Y S + K
Sbjct: 476 VCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVV----YTSLIRNFFKCGR 531
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ + K+ R D + N + G + L++ K R Y
Sbjct: 532 KEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSI 591
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ L+K G ++ K+ E + G DTR N VI G+C +G V A +LE++ KG
Sbjct: 592 LIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKG 651
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI--TSILSKLGDE 430
T ++ V G K +R + A ++ E K D V+ +S++ G
Sbjct: 652 LQPTVVTYGSVIDGL---AKIDR----LDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKV 704
Query: 431 GSVQD 435
G + +
Sbjct: 705 GRIDE 709
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 115/277 (41%), Gaps = 38/277 (13%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
++Y L++ V+ + F +MKE G+ L T YN ++ + K+G+ K +L E
Sbjct: 587 RSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEE 646
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
MK K + P +Y I+ L+ ++ E +S+ + L+ Y+S + K
Sbjct: 647 MKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKA-VDLNVVVYSSLIDGFGKVG 705
Query: 252 LIDKAS----------------------DVLKKAEERLEQ-------------KDGIGYN 276
ID+A D L KAEE E + + Y+
Sbjct: 706 RIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYS 765
Query: 277 FLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
+++ + ++ W +++K K Y TM+ L ++G EA+ + + ++
Sbjct: 766 IMVNGLCKVRKFNKAFVFWQEMQKQGLKPN-TITYTTMISGLARVGNVLEAKDLFERFKS 824
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
SG D+ NA+I G N +A + E+ KG
Sbjct: 825 SGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKG 861
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 148/383 (38%), Gaps = 48/383 (12%)
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIAL--------------STLTYNDIMCLYSKTGQYE 183
LN + Q + + R++K++ +AL S YN ++ L ++T E
Sbjct: 90 LNTFDEMPQPELVVGVIRRLKDVRVALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLE 149
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSY-GARSDLEGMEII--LREMESQPHIVLDWSTY 240
+ +L EM P N + + S+ +R E +I +R+ + +P +S Y
Sbjct: 150 YLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPA----YSAY 205
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL-------GNKSEVLR 293
+ A+ D +L++ +E IGY + L+ +L G L
Sbjct: 206 TTLIGALSAAHEADPMLTLLRQMQE-------IGYEVTVHLFTTLICVFAREGRVDAALS 258
Query: 294 LWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
L D K+ N D Y ++ K+G+ + A K E + G D ++I
Sbjct: 259 LLDEMKS---NSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIG 315
Query: 351 GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG 410
C V A + E+L ++ + GY GK + ++ +
Sbjct: 316 VLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQ-----KR 370
Query: 411 KGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGV 468
KG P IL+ LG +G V++ + A++ N Y+ I + G +
Sbjct: 371 KGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAA 430
Query: 469 DELLDSMKADGIDEDEETKEILV 491
++ DSMK G+ + T I++
Sbjct: 431 LKVQDSMKEAGLFPNIITVNIMI 453
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 147/355 (41%), Gaps = 15/355 (4%)
Query: 117 AESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
AE+ + +KD T+ L + Y + D AL + + G+ ++ T + ++
Sbjct: 676 AENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLN 735
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
K GQ EK ++L AK + P+ Y I+ Y + DL G + + ME Q +
Sbjct: 736 ALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQ-GMK 794
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
D Y + + ++ A + K + + YN LI Y G K E +
Sbjct: 795 PDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGY---GRKYEFDKC 851
Query: 295 WDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
+DL K + Y T++ L K + EA+ V ++ E G S + RI N +I G
Sbjct: 852 FDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDG 911
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
C+ G +++A E++ +KG ++ + G GK + + + K
Sbjct: 912 CCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEA-----EDMLLEISRK 966
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG 465
G KPD S++S G+VQ A ++T I + YH I + G
Sbjct: 967 GLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEG 1021
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 166/376 (44%), Gaps = 32/376 (8%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ Y R+ A M++ G+ L YN ++ + + G E + +MK
Sbjct: 765 YNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMK 824
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIKA 250
K + P +Y I I YG + + + +L+EME + P++V +Y + + K
Sbjct: 825 LKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVV----SYGTLINCLCKG 880
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD- 309
+ + +A V + E+R + YN LI S G + R + K+ I +
Sbjct: 881 SKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRF---SEEMFKKGIELNL 937
Query: 310 --YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+++ L G+ EAE +L E G D N++I GY G VQ A+ E+
Sbjct: 938 VTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEE 997
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ G T ++ ++ + T+ G + K ++ E +PD V +L
Sbjct: 998 MKTSGIKPTLKTYHLLISLC-----TKEGIELTK---KIFGE-MSLQPDLLVYNGVLHCY 1048
Query: 428 GDEGSVQDVEAFVAALRTV---IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDE 482
G + +AF + + I +++ Y++ I ++ GK V L+D MKA ++
Sbjct: 1049 AVHGDMD--KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEP 1106
Query: 483 DEETKEILV---CTME 495
+ +T +I+V C M+
Sbjct: 1107 EADTYDIIVKGHCEMK 1122
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 150/337 (44%), Gaps = 11/337 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y + +K+ +MK I S +T+N ++ K G E +VLTEM
Sbjct: 624 TYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEM 683
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PD F++ I + Y + +D + + E + ++ T + + K
Sbjct: 684 KDQGFVPDAFTFSILFDGYSS-NDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQ 742
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN-KSEVLRLWDLEKTACKRYINRDYI 311
I+KA ++L + + + + YN +I Y+ G+ +++ +EK K + Y
Sbjct: 743 IEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKP-DHLAYN 801
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++ +LG+ E AE+ + + +L G S N +I GY +L+++ +
Sbjct: 802 CLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDN 861
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY-VEGKGWKPDPKVITSILSKLGDE 430
G T PN VV+ G +G + ++A + +E +G P+ ++ ++ +
Sbjct: 862 G--TMPN---VVSYGTL-INCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSK 915
Query: 431 GSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGK 466
G ++D F + + I +N Y+ I NGK
Sbjct: 916 GKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGK 952
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 170/414 (41%), Gaps = 24/414 (5%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDH-AVQLDLIGRVHGFLSAESYFSNL--KDDE 128
L + K S+A ++ + +GI F D + LD + + F + F N+ D
Sbjct: 492 LNESKMISEAADLFFALRNEGI--FPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFR 549
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
+ YG + V+ K L F +MK I+ + YN ++ K Q + +
Sbjct: 550 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQL 609
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
EM A+ + P +Y I+ Y + E +RE +I T+ +
Sbjct: 610 FDEMLARRLLPSLITYNTLIDGYCKDGNPEK-SFKVRERMKADNIEPSLITFNTLLKGLF 668
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
KA +++ A +VL + +++ D ++ L Y+S L +++ TA +
Sbjct: 669 KAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYE---TAVDSGLKM 725
Query: 309 DYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+ T +L AL K G+ E+AE++L G + + N +I GY G + A +
Sbjct: 726 NAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKI 785
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTE-----------RGFQCMKAALSVYVEGKGWK 414
+ + ++G ++ + + + G E +G ++ + G G K
Sbjct: 786 DAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRK 845
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGV 468
+ +L ++ D G++ +V ++ + + ++ + +K ++ + +GV
Sbjct: 846 YEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED-RGV 898
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 114/269 (42%), Gaps = 5/269 (1%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
LK + +TY L+ Y R+ + DK ++M++ G + ++Y ++ K +
Sbjct: 825 LKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLL 884
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+ V +M+ + + P+ Y + I+ ++ +E EM + I L+ TY +
Sbjct: 885 EAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEM-FKKGIELNLVTYNTL 943
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
+ +A D+L + + + D YN LIS Y GN + L++ KT+
Sbjct: 944 IDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGI 1003
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ + Y ++ K G E +K+ E L D + N V+ Y +G + A
Sbjct: 1004 KPTLKTYHLLISLCTKEG-IELTKKIFGEMSLQP---DLLVYNGVLHCYAVHGDMDKAFN 1059
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
+ + ++EK ++ + G GK
Sbjct: 1060 LQKQMIEKSIGLDKTTYNSLILGQLKVGK 1088
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +L+CY DKA + ++M E I L TYN ++ K G+ +V ++ EM
Sbjct: 1040 VYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 1099
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
KA+ + P+ +Y I + + D G + REM+ +
Sbjct: 1100 KAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEK 1137
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 108/249 (43%), Gaps = 21/249 (8%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ Y L++ + + + A +M + GI L+ +TYN ++ S G+ + D+L E
Sbjct: 903 RIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLE 962
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
+ K + PD F+Y I+ Y +++ + EM++ I TY H I
Sbjct: 963 ISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTS-GIKPTLKTY----HLLISLC 1017
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-- 309
+ K E Q D + YN ++ YA G+ + ++L+K ++ I D
Sbjct: 1018 TKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMD---KAFNLQKQMIEKSIGLDKT 1074
Query: 310 -YITMLEALMKLGEHEEAEKVL-----KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
Y +++ +K+G+ E ++ +E E ++YD ++ G+C A
Sbjct: 1075 TYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDI-----IVKGHCEMKDYMGAYV 1129
Query: 364 ILEDLVEKG 372
++ EKG
Sbjct: 1130 WYREMQEKG 1138
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 155/405 (38%), Gaps = 42/405 (10%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L++ + E+ + M G C ++ + G++ + SA F +K++
Sbjct: 204 MILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKEN 263
Query: 128 E--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
T + Y LL Y + + +KAL ++MK+ G L+ TY + + K G+ +
Sbjct: 264 GLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDA 323
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVL------- 235
V +M PD IN G LE + R+MES +P++V
Sbjct: 324 YRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKA 383
Query: 236 ------------DW-------------STYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
W TY+ + K N I+KA +L++ +E+
Sbjct: 384 LFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPP 443
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
Y LI+ + L+ K C R Y M++ K G EA +
Sbjct: 444 CPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLF 503
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
E E G+ D NA++ G G++ A+++L + E G + NS ++ G
Sbjct: 504 NEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLART 563
Query: 391 GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
G +R + S + KPD ++L L G ++
Sbjct: 564 GVPDRAIEMFAKMKSSII-----KPDAVSYNTVLGCLSHAGLFEE 603
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 129/297 (43%), Gaps = 26/297 (8%)
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM-KAKNIFPDN 201
+ + +KALS F ++K + TYN ++ + + G EKV ++ EM N FPD
Sbjct: 175 KAKMVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDT 234
Query: 202 FSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK 261
+Y I+++G + + EM+ + + Y + Y K + ++KA DV+K
Sbjct: 235 VTYSALISAFGKLGHYDSAIRLFDEMK-ENGLYPTAKIYTTLLGIYFKLDKVEKALDVIK 293
Query: 262 KAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKR---YINRDYITMLEAL 317
+ +++ Y I G + R++ D+ K CK IN +++ L
Sbjct: 294 EMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLIN----SLINIL 349
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ------NAEAILEDLVEK 371
K+G E K+ ++ E S+ + PN V L + A + E +
Sbjct: 350 GKVGRLEVTLKLFRKME----SWQCK-PNVVTYNTVIKALFECKAPASEAASWFEKMKGC 404
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
G A + +++++ G+ + E+ ++ ++ KG+ P P S+++ LG
Sbjct: 405 GIAPSSFTYSILIDGFCKTNRIEKALLLLEE-----MDEKGFPPCPAAYCSLINSLG 456
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 43/259 (16%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAV--QLDLIGRVHGFLSAESYFSNLK 125
+I K R +AL + + M+ KG F PC A ++ +G+V + +A F LK
Sbjct: 416 LIDGFCKTNRIEKALLLLEEMDEKG---FPPCPAAYCSLINSLGKVKRYEAANELFLELK 472
Query: 126 DD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
++ + + Y ++ + + + +A+ F +M+++G YN +M + G +
Sbjct: 473 ENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMID 532
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+ +L M PD S+ I +N
Sbjct: 533 EAQSLLRTMDENGCSPDLNSHNIILNGLA------------------------------- 561
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
+ + D+A ++ K + + + D + YN ++ + G E +L
Sbjct: 562 -----RTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGF 616
Query: 304 RYINRDYITMLEALMKLGE 322
Y N Y ++LEA+ K+ E
Sbjct: 617 EYNNITYTSILEAVGKVDE 635
>gi|224081220|ref|XP_002306340.1| predicted protein [Populus trichocarpa]
gi|222855789|gb|EEE93336.1| predicted protein [Populus trichocarpa]
Length = 416
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 116/291 (39%), Gaps = 45/291 (15%)
Query: 110 RVHGFLSAESYFSNLKDDEKTYQ---TYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
+ A +YF +K E+ TY +L + + R ++ + F+ ++E ++
Sbjct: 140 KAKSLTKALAYFEKMKSIERCQPNVVTYNIILRAFAQARNVNQVNALFKDLEESIVSPDI 199
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
TYN ++ Y K G ++ VL+ MK PD ++ + I+SYG + D E ME + +
Sbjct: 200 YTYNGVLDAYGKNGMIREMESVLSRMKIDQCKPDIITFNLLIDSYGKKQDFEKMEQVFKS 259
Query: 227 M---ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
+ + +P + T+ S Y KA L DKA V KK + I + LI +Y
Sbjct: 260 LLRSKEKPTL----PTFNSMIVNYGKARLKDKAESVFKKMADMRYTPSFITFESLIMMYG 315
Query: 284 SLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
S+ ++D M+E SG
Sbjct: 316 ICDCVSKARDIFD---------------DMVE--------------------SGKEVKVS 340
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
NAV+ YC NGL A +LE+ G +++ ++ Y A E
Sbjct: 341 TLNAVLNVYCMNGLHMEAHILLENARSIGVPPNSSTYKLLYRAYTKAKMKE 391
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 150/346 (43%), Gaps = 27/346 (7%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +LL Y + +AL+ F +K+ G+ ++Y ++ Y ++ Q EK +V +MK
Sbjct: 226 YNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK 285
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKA 250
+ P+ SY I++YG+ L+ +L EME QP +V ST +A +
Sbjct: 286 KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVV-SISTLLAACG---RC 341
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
I + +L+ A R + + YN I Y S G+ + L L+ + + + Y
Sbjct: 342 RQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTY 401
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++ KLG++ E+ + ++ D+++ + G + AE+ + +
Sbjct: 402 NILISGSSKLGKYTESLRFFEDM------VDSKVSST------KEGKLSEAESTFSSMKK 449
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G ++ + Y G +R + K +E G PD + +S++
Sbjct: 450 SGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKE-----MEVNGIPPDAIICSSLMEAFNKG 504
Query: 431 GSVQDVEAFVAAL-RTVIPMNRQMYHAFIKAN--IRNGKGVDELLD 473
G + V + + + IP+N++ Y I + IR+ K E+++
Sbjct: 505 GEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIE 550
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 141/366 (38%), Gaps = 44/366 (12%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY ++N KAL +KM E G+ +T+N ++ QY K
Sbjct: 80 TRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYF 139
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYI 248
MK N+ D F+ I I+ E +E+ E + D TY S H Y
Sbjct: 140 EIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYC 199
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
++ + + + + YN L+ YAS G E L +++L K R
Sbjct: 200 IYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIV 259
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++L A + + E+A +V + + + + NA+I Y + G+++ A +L ++
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
E G +PD I+++L+ G
Sbjct: 320 ----------------------------------------EKDGIQPDVVSISTLLAACG 339
Query: 429 DEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEE 485
+ +E + A R+ I +N Y++ IK+ + G + EL SM+ + D
Sbjct: 340 RCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAV 399
Query: 486 TKEILV 491
T IL+
Sbjct: 400 TYNILI 405
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 145/364 (39%), Gaps = 64/364 (17%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
YG ++ Y R Q D+A F +M+E YN ++ +S+ GQ+ +++ +M
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
I P +Y IN+ GA +W
Sbjct: 74 RAAIPPTRTTYNNVINACGAAG--------------------NW---------------- 97
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
KA ++ KK E D + +N ++S + S+ + +++ K A + D T+
Sbjct: 98 KKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGA---NVTSDTFTL 154
Query: 314 ---LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII------GYCNNGLVQNAEAI 364
+ L+K+G+ EA ++ S T+ P V+ YC G V+N +AI
Sbjct: 155 NIIIHCLVKIGQCGEAIELFN----SMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAI 210
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITS 422
+ +V +G PN +VA RG + AL+++ ++ G +PD TS
Sbjct: 211 FDLMVAEG--VKPN---IVAYNSLLGAYASRGMH--REALAIFNLIKKNGLRPDIVSYTS 263
Query: 423 ILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADG 479
+L+ G + E F + N+ Y+A I A G K LL M+ DG
Sbjct: 264 LLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDG 323
Query: 480 IDED 483
I D
Sbjct: 324 IQPD 327
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 13/269 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +LLN Y R Q +KA F KMK+ + ++YN ++ Y G ++ +L EM
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ I PD S + + G + +E IL S+ I L+ Y S Y+
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSR-GIDLNTVAYNSGIKSYLSFGD 378
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+KA ++ E + D + YN LIS + LG +E LR ++ D +
Sbjct: 379 YEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFE------------DMVD 426
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+ K G+ EAE + SG D +I Y G + A + +++ G
Sbjct: 427 SKVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNG 486
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+ + + G+ ER Q M+
Sbjct: 487 IPPDAIICSSLMEAFNKGGEPERVLQLME 515
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 122/312 (39%), Gaps = 31/312 (9%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL R RQ + + + GI L+T+ YN + Y G YEK ++ T M+ N
Sbjct: 334 LLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESN 393
Query: 197 IFPDNFSYRICINS---YGARSD----LEGM---------EIILREMES------QPHIV 234
+ PD +Y I I+ G ++ E M E L E ES +
Sbjct: 394 VKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCF 453
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
D TY + Y +A D+ K+ E D I + L+ + G VL+L
Sbjct: 454 PDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQL 513
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI--IGY 352
+ K + Y ++ + + + + A ++++ + S +S N V+ +G
Sbjct: 514 MEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGK 573
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
C G +N + +V +++AVV GK + + ++ ++E G
Sbjct: 574 C--GKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQ-----WMEDSG 626
Query: 413 WKPDPKVITSIL 424
P + ++L
Sbjct: 627 VHPTLYMFQNVL 638
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 193/476 (40%), Gaps = 72/476 (15%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNR--------------KGICVFAPCDHAVQLDLIGRVHG 113
+I +L RFS AL++ WM KG+C+ + A+ L G
Sbjct: 421 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 480
Query: 114 FLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
L T TY L+N Y+ + + A MKE G TYN+++
Sbjct: 481 PLP-------------TVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELV 527
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG-------ARSDLEGMEIILRE 226
+SK G+ E EM + P+ SY I+ + A S LE ME E
Sbjct: 528 SGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERME----E 583
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
M P++ +Y + + K N +A + K E+ + I Y LI G
Sbjct: 584 MGCNPNV----ESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNG 639
Query: 287 NKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
+++ D+EK C + Y +++ L + G+ +EAE +LKE E G + D
Sbjct: 640 RTQFAFKIFHDMEKRKCLPNL-YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTF 698
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY------------------ 387
++I G+ G + +A +L +V+ G +++V+ G
Sbjct: 699 TSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAV 758
Query: 388 --FDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-- 443
F + + F+ + L+ E G +P ++++S L +G + E V +
Sbjct: 759 YSFSPHEKDVNFEIVSNLLARMSE-IGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKE 817
Query: 444 RTVIPMNRQMYHAFIKANIRNGKGVD---ELLDSMKADGIDEDEETKEILVCTMEK 496
R P +R++Y++ + A+ +N + VD ++ S++A G L+C + K
Sbjct: 818 RGFCP-DREIYYSLLIAHCKNLE-VDHALKIFHSIEAKGFQLHLSIYRALICALCK 871
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 159/399 (39%), Gaps = 21/399 (5%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDL-- 107
D VK G +I L R +AL++ + M KGI P + L +
Sbjct: 298 FDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI---EPTVYTYTLPITA 354
Query: 108 IGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
+ + A + +K QTY AL++ R + + A+ + KM + G+ +
Sbjct: 355 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 414
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
T+TYN ++ G++ + M+ + +Y I D+E ++
Sbjct: 415 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 474
Query: 226 EMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+M P +V TY + + Y+ ++ A+ +L +E + D YN L+S +
Sbjct: 475 KMLKMGPLPTVV----TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF 530
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINR-DYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+ G K E + E C N Y T+++ K G+ + A +L+ E G + +
Sbjct: 531 SKWG-KLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPN 589
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
NAVI G AE I + + E+G ++ + G G+T+ F+
Sbjct: 590 VESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFH 649
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
+E + P+ +S++ L EG + E +
Sbjct: 650 D-----MEKRKCLPNLYTYSSLIYGLCQEGKADEAEILL 683
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 160/385 (41%), Gaps = 28/385 (7%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L K RFS+A ++ D M +G+ + + +D + R A F +++
Sbjct: 596 VINGLSKENRFSEAEKICDKMAEQGL-LPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 654
Query: 128 E--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+ TY +L+ ++ + D+A ++M+ G+A +T+ ++ + G+ +
Sbjct: 655 KCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHA 714
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH-IVLDWSTYASAA 244
+L M P+ +Y + + L+ ++L E + H V +S +
Sbjct: 715 FLLLRRMVDVGCKPNYRTYSVLLKG------LQKECLLLEEKVAVQHEAVYSFSPHEKDV 768
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
+F I +NL+ + S++ E L+ Y+ L+S L K L K +R
Sbjct: 769 NFEIVSNLLARMSEI--GCEPTLDT-----YSTLVS---GLCRKGRFYEAEQLVKDMKER 818
Query: 305 YINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
D Y ++L A K E + A K+ E G I A+I C G V+ A
Sbjct: 819 GFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEA 878
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
+A+ ++++EK W V+ G G+ + CMK L +E K + P+ +
Sbjct: 879 QALFDNMLEKEWNADEIVWTVLVDGLLKEGELDL---CMK--LLHIMESKNFTPNIQTYV 933
Query: 422 SILSKLGDEGSVQDVEAFVAALRTV 446
+ +L G + E L+ +
Sbjct: 934 ILGRELSRIGKSIESEPLADKLKVL 958
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 143/336 (42%), Gaps = 24/336 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+ + R R D A F +M + G +++TY+ ++ G+ ++ D+L EM
Sbjct: 277 TYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 336
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIK 249
K I P ++Y + I + A E ++ M+ +P++ TY + +
Sbjct: 337 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV----QTYTALISGLSR 392
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
++ A + K + + + YN LI+ G S L+++ + +
Sbjct: 393 LGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQT 452
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP-NAVIIGYCNNGLVQNAEAILEDL 368
Y +++ L G+ E+A VL E L T + N +I GY G V NA +L+ +
Sbjct: 453 YNEIIKGLCLGGDIEKA-MVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 511
Query: 369 VEKGKATTPNSWAV--VAAGYFDAGKTERG---FQCM--------KAALSVYVEGKGWKP 415
E G P+ W + +G+ GK E FQ M + + ++G
Sbjct: 512 KENG--CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDG 569
Query: 416 DPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR 451
+ S+L ++ + G +VE++ A + + NR
Sbjct: 570 KVDIALSLLERMEEMGCNPNVESYNAVINGLSKENR 605
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 97/453 (21%), Positives = 184/453 (40%), Gaps = 66/453 (14%)
Query: 95 VFAPCDHAVQLDL--------IGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQ 146
VFAP DH L + I RV FL+ S + Y LL +
Sbjct: 165 VFAPADHIRILMIKACRNEEEIRRVADFLNE---ISGMGFGFSLYSC-NTLLIQLAKFEM 220
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
+ A + +++M GI S LT+N ++ + SK G+ + +L+++ ++ PD F+Y
Sbjct: 221 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 280
Query: 207 CINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
I + +L+ + M + P+ V TY++ + +D+A D+L++
Sbjct: 281 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSV----TYSTLINGLCNEGRVDEALDMLEEM 336
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTACKRYINRDYITMLEALMKLGE 322
E+ + Y I+ ++ ++ E + L ++K C+ + + Y ++ L +LG+
Sbjct: 337 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV-QTYTALISGLSRLGK 395
Query: 323 HEEA----EKVLKE------------------------------W-ELSGNSYDTRIPNA 347
E A K+LKE W E G+ +T+ N
Sbjct: 396 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 455
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
+I G C G ++ A + E +++ G T ++ + GY G A L
Sbjct: 456 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA-----ARLLDL 510
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEA-FVAALRTVIPMNRQMYHAFIKANIRNGK 466
++ G +PD ++S G ++ F + + N Y I + ++GK
Sbjct: 511 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGK 570
Query: 467 GVD---ELLDSMKADGIDEDEETKEILVCTMEK 496
VD LL+ M+ G + + E+ ++ + K
Sbjct: 571 -VDIALSLLERMEEMGCNPNVESYNAVINGLSK 602
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 120/260 (46%), Gaps = 4/260 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T ++N R+ K + KM + G + +TYN ++ + G + ++L+ M
Sbjct: 305 TLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNM 364
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ PD +Y + + E E ++ +M SQ + D ST+ + F+ + L
Sbjct: 365 QSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKM-SQNDRLPDNSTFNTIISFWCQKGL 423
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY-INRDYI 311
I +A +V K+ E+ + Y+ +I G + L L L + A K + ++ Y
Sbjct: 424 ILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALEL--LNEMANKGFNTDKMYR 481
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+ E+L K + EE +V+ + + SG S T + N V++G C NG A +L D+V
Sbjct: 482 VLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSC 541
Query: 372 GKATTPNSWAVVAAGYFDAG 391
G +++ ++ G F G
Sbjct: 542 GCMPDESTYIILIEGLFYEG 561
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 173/431 (40%), Gaps = 52/431 (12%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L +R R + AL V D M +G C + + L + G+ A ++ +
Sbjct: 169 LIHALCERGRVADALVVLDGMLCRG-CAPDVVTYNILLQAACKGRGYRQALELIDFMRAE 227
Query: 128 --EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
E TY +++ R+ D+A + G +T+ YN ++ + ++
Sbjct: 228 GCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDA 287
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
++L EM +N P+ + + IN+ + L+ + + L +M S + A+
Sbjct: 288 DEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKM----------SKHGCTAN 337
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKR 304
+ YN +IS GN L L +++ CK
Sbjct: 338 V--------------------------VTYNAVISGMCEQGNVDSALELLSNMQSFGCKP 371
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
I Y T+L+ L E+AE+++ + + D N +I +C GL+ A +
Sbjct: 372 DI-VTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEV 430
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+ + EKG +++ + G AGK E+ + + + KG+ D K+ +
Sbjct: 431 FKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNE-----MANKGFNTD-KMYRVLT 484
Query: 425 SKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGK---GVDELLDSMKADGI 480
L E +++V V L+ + I +Y+ + RNGK +D L D M + G
Sbjct: 485 ESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLAD-MVSCGC 543
Query: 481 DEDEETKEILV 491
DE T IL+
Sbjct: 544 MPDESTYIILI 554
>gi|255554390|ref|XP_002518234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542581|gb|EEF44120.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 932
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 15/265 (5%)
Query: 108 IGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
+G +H L+ S E TY A++ + R+ + D+A + F+ ++ +GI L
Sbjct: 310 VGFLHHMLANGS--------EPNLVTYTAIILGFCRKGKIDEAFAIFKLVENLGIKLDEF 361
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
Y ++ + G +++ ++ EM+ K I P +Y I INS + + + +
Sbjct: 362 IYAILVDGFCLKGDFDRAYQLIEEMEKKGITPTIVAYNILINSLCKAGRTFDADEVSKAL 421
Query: 228 ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN 287
+ D TY++ H YIK +V ++ EE Q D I +N ++ +G
Sbjct: 422 QG------DKITYSALLHGYIKEENSIGILEVRQRLEEARIQMDIIMFNIILKALFVVGA 475
Query: 288 KSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
+VL L++ + + Y T++ K+G +EA ++ E+ G N
Sbjct: 476 FEDVLVLYNGMQEMNLVANSITYCTIIGGFCKVGRIDEALEIFDEFR-HGLGSSVACYNC 534
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKG 372
+I G C NG+V A I +L+EKG
Sbjct: 535 MINGLCKNGMVDMAAEIFVELIEKG 559
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 81/190 (42%), Gaps = 8/190 (4%)
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ +L LG +E ++ E E G ++D + I GY NG+ A +++V
Sbjct: 223 YTAVVSSLCMLGRADEVFDLVCEMEEEGLAFDVVFYSCWICGYFRNGVFIEAIRKHKEMV 282
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+KG ++ + ++ G+ G E+ + L+ G +P+ T+I+
Sbjct: 283 KKGISSDTIGYTILIDGFSKEGSVEKSVGFLHHMLA-----NGSEPNLVTYTAIILGFCR 337
Query: 430 EGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKG--VDELLDSMKADGIDEDEET 486
+G + + A + + I ++ +Y + G +L++ M+ GI
Sbjct: 338 KGKIDEAFAIFKLVENLGIKLDEFIYAILVDGFCLKGDFDRAYQLIEEMEKKGITPTIVA 397
Query: 487 KEILVCTMEK 496
IL+ ++ K
Sbjct: 398 YNILINSLCK 407
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 151/362 (41%), Gaps = 11/362 (3%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
ALL + R T A F +M G+A++T YN ++ + K G ++T M A
Sbjct: 242 ALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGDAALAESLMTRMDAA 301
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
+ D FS+ I Y R ++ + +RE + D T+ S H K + +
Sbjct: 302 GVPLDRFSFNTVIALY-CRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKE 360
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTACKRYINRDYITML 314
AS +L++ D + Y L+ Y G+ E ++L ++E + Y +L
Sbjct: 361 ASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVA-TYNAIL 419
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
L + G+ +E +L E + D N +I YC G + +A + ++E G
Sbjct: 420 RKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQ 479
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
++ + G+ A + + K AL + G G+ P+ V++ I+ L ++ +
Sbjct: 480 LDQFTYKALVHGFCKAKELDEA----KEAL-FEMMGAGFSPNYSVLSWIVDGLCNKNNAV 534
Query: 435 DVEAFVAAL-RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
V A L + P ++ +Y + I+ + G + + M+ G++ D L
Sbjct: 535 AVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLA 594
Query: 492 CT 493
C
Sbjct: 595 CA 596
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 9/252 (3%)
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+ TY L++ Y R ++A+ +M+ MG+ TYN I+ + G+ ++V +L
Sbjct: 377 HVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLN 436
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM + + D+ + IN+Y R D+ +++ R MES + LD TY + H + K
Sbjct: 437 EMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESG--LQLDQFTYKALVHGFCK 494
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A +D+A + L E + Y+ L + L NK+ + + + KR D
Sbjct: 495 AKELDEAKEALF---EMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPD 551
Query: 310 ---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y +++ L K G + A V E + G D + + Y G A IL
Sbjct: 552 KAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILN 611
Query: 367 DLVEKGKATTPN 378
++ +K TP
Sbjct: 612 EMAKKQLYITPQ 623
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 138/310 (44%), Gaps = 10/310 (3%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD- 126
++ L K + + A +V D M R G+ + +A+ L + + AES + +
Sbjct: 243 LLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAM-LHVCLKAGDAALAESLMTRMDAA 301
Query: 127 ----DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
D ++ T AL Y R+ +A+ +M+ G+ +T+N ++ K +
Sbjct: 302 GVPLDRFSFNTVIAL---YCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRV 358
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
++ +L EM + PD+ +Y ++ Y DLE + EME+ ++ +TY +
Sbjct: 359 KEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMG-MLPGVATYNA 417
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
+ + + + +L + +ER Q D + N LI+ Y G+ + L++ +
Sbjct: 418 ILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESG 477
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+ Y ++ K E +EA++ L E +G S + + + ++ G CN
Sbjct: 478 LQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVL 537
Query: 363 AILEDLVEKG 372
AI ++L+++G
Sbjct: 538 AIPDELMKRG 547
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 144/365 (39%), Gaps = 11/365 (3%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY A+++ ++ Q + A F +M+ MG+ +TYN ++ Y K G ++ +
Sbjct: 342 TVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLF 401
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+++ + P +Y I I+ Y DLE + EM Q + D TY
Sbjct: 402 GDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQ-GCLPDVCTYTILMKGSHN 460
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A + A + + + Q D YN I +LG ++ RL ++
Sbjct: 461 ACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVT 520
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ L K G +A+ + + +G D +I +C GL++ A +D++
Sbjct: 521 YNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMI 580
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G A + ++ V Y G + + L +G +P+ ++ L
Sbjct: 581 SDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLE-----EGVEPNEITYNVLIHALCR 635
Query: 430 EGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVDEL--LDSMKADGIDEDEE 485
G Q + R ++P N+ Y I N + G D + M +GI D
Sbjct: 636 TGRTQLAYRHFHEMLERGLVP-NKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYL 694
Query: 486 TKEIL 490
T + L
Sbjct: 695 THKAL 699
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 143/353 (40%), Gaps = 24/353 (6%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
LS F +M G+A N ++ + S +++ + V EM I P +Y ++
Sbjct: 186 CLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLD 245
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE- 268
S+ + + ++L+EME++ L H + L K L++A E +E
Sbjct: 246 SFLKEGRNDKVAMLLKEMETRGSGCLP----NDVTHNVVITGLARKGD--LEEAAEMVEG 299
Query: 269 -----QKDGIGYNFLIS--LYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLG 321
+ YN LI+ L K++ L+L ++E + Y M+ L++ G
Sbjct: 300 MRLSKKASSFTYNPLITGLLAKGFVKKADDLQL-EMENEGIMPTV-VTYNAMIHGLLQSG 357
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+ E A+ E G D N+++ GYC G ++ A + DL G A T ++
Sbjct: 358 QVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYN 417
Query: 382 VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-EAFV 440
++ GY G E + + + +G PD T ++ + S+ E F
Sbjct: 418 ILIDGYCRLGDLEEARRLKEEMVE-----QGCLPDVCTYTILMKGSHNACSLAMAREFFD 472
Query: 441 AALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
L + + Y+ I+A + G L + M +GI D T IL+
Sbjct: 473 EMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILI 525
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 116/259 (44%), Gaps = 12/259 (4%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIAL--STLTYNDIMCLYSKTGQYEKV 185
E + TY LL+ ++++ + DK ++M+ G + +T+N ++ ++ G E+
Sbjct: 234 EPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEA 293
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYAS 242
+++ M+ +F+Y I A+ ++ + + EME++ P +V TY +
Sbjct: 294 AEMVEGMRLSKK-ASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVV----TYNA 348
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
H +++ ++ A + Q D I YN L++ Y G+ E L L+ + A
Sbjct: 349 MIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAG 408
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
Y +++ +LG+ EEA ++ +E G D ++ G N + A
Sbjct: 409 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAR 468
Query: 363 AILEDLVEKGKATTPNSWA 381
++++ KG P+ +A
Sbjct: 469 EFFDEMLSKG--LQPDCFA 485
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 154/375 (41%), Gaps = 29/375 (7%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T QT+G+L+N + + + +MK+ G++++ YN+I+ K G K D L
Sbjct: 277 TLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTL 336
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM PD +Y IN + +R ++E E +L E + + + TY H Y K
Sbjct: 337 KEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLL-EQTIRRGLAPNKLTYTPLVHGYCK 395
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
KA+D L + + D I Y LI G L + D R +NR
Sbjct: 396 QGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRD-------RMMNRG 448
Query: 310 -------YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
Y ++ L K G+ A+ +L E + D + ++ G+ +G + A+
Sbjct: 449 ILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAK 508
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC---MKAALSVYVEGKGWKPDPKV 419
+ + ++EKG + V+ G+ +G + C M+ A V PD
Sbjct: 509 KLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHV--------PDIFT 560
Query: 420 ITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMK 476
++I+ + ++ V + F ++ N Y + I R G K ++L M+
Sbjct: 561 FSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMR 620
Query: 477 ADGIDEDEETKEILV 491
+ G+ T IL+
Sbjct: 621 SHGLKPSVVTYSILI 635
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 7/235 (2%)
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGM 220
G + + YN ++ Y K G+ E + ++K K P ++ +N + E +
Sbjct: 238 GCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAI 297
Query: 221 EIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
+++L EM+ + + ++ Y + K KA D LK+ E + D + YN LI+
Sbjct: 298 DLLLLEMKDR-GLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLIN 356
Query: 281 LYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSG 337
+ S G E +L LE+T +R + + Y ++ K GE+ +A L E SG
Sbjct: 357 HFCSRGEVEEAEKL--LEQTI-RRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSG 413
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
D A+I G G V A I + ++ +G N + V+ G F GK
Sbjct: 414 LEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 468
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 134/302 (44%), Gaps = 15/302 (4%)
Query: 109 GRVHGFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
GRVH L A F ++ + T + Y +L+ V + +A+ +R+M+E+GI S
Sbjct: 96 GRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSV 155
Query: 167 LTYNDIMCLYSKTGQ-YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
++ N ++ K + + + EM + PD+++Y IN ++ + + +
Sbjct: 156 VSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFK 215
Query: 226 EMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
EME Q TY S H ++N +D+A +L++ + + + Y+ L+
Sbjct: 216 EME-QKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKG 274
Query: 286 GNKSEVLRLWDLEKTACKRYINR--DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
G+ S+ ++L LE K ++ Y T++ L K + EA ++L + G +
Sbjct: 275 GHSSQAMQL--LEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAG 332
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV-------VAAGYFDAGKTERG 396
+ +I G C G Q A ++++V G + SW++ V G + R
Sbjct: 333 LYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRA 392
Query: 397 FQ 398
FQ
Sbjct: 393 FQ 394
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 157/395 (39%), Gaps = 56/395 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ ++ + + F +M+EMG++ +TYN ++ Y K G E+V + EM
Sbjct: 291 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 350
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
K PD +Y IN Y + EM++ +P++V TY++ + K
Sbjct: 351 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV----TYSTLIDAFCK 406
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINR 308
++ A + + Y LI GN +E +L D+ + K I
Sbjct: 407 EGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNI-V 465
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY---------------- 352
Y +L+ L K G EAE+V + G S + ++ A++ GY
Sbjct: 466 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 525
Query: 353 -------------------CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
C+ ++ + ILE++ +G + P + YF AGK+
Sbjct: 526 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 585
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKLGDEGSVQ-DVEAFVAALRTVIPMN 450
AL+ + E + + ++T ++ L G V+ V+ F L + N
Sbjct: 586 SD-------ALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPN 638
Query: 451 RQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
+Y + I +N + +L D M+ G+ D
Sbjct: 639 VAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPD 673
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 142/342 (41%), Gaps = 11/342 (3%)
Query: 154 FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGA 213
F M GIA S TYN ++ K G E + +M+ + PD +Y I+ YG
Sbjct: 277 FNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGK 336
Query: 214 RSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGI 273
LE + + EM+ V D TY + Y K + +A + + + + + +
Sbjct: 337 VGSLEEVASLFNEMK-DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV 395
Query: 274 GYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
Y+ LI + G ++L+ D+ +T Y ++++A K G EA K+L +
Sbjct: 396 TYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPN-EFTYTSLIDANCKAGNLTEAWKLLND 454
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
+G + A++ G C G + AE + +++ G + + + GY A +
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514
Query: 393 TERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNR 451
E + +K + KPD + SI+ + +++ + + +++ I N
Sbjct: 515 MEDAMKILKQMTECNI-----KPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 569
Query: 452 QMYHAFIKANIRNGKGVDEL--LDSMKADGIDEDEETKEILV 491
+ I A + GK D L M+ G++ T +L+
Sbjct: 570 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLI 611
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 115/280 (41%), Gaps = 15/280 (5%)
Query: 101 HAVQLDLIGRVHGFLSAESYF-SNLKDD-EKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
+ LD + + + AE F S LKD Q Y AL++ Y++ + + A+ ++M
Sbjct: 467 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 526
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY---GARS 215
E I + Y I+ + + E+ +L EMK++ I + I++Y G S
Sbjct: 527 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 586
Query: 216 DLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
D ++++ + IV TY KA +++ A D + Q + Y
Sbjct: 587 DALNFFQEMQDVGVEATIV----TYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVY 642
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKE 332
LI +L+D + C R + D + +++ +K G +EA ++
Sbjct: 643 TSLIDGLCKNNCIESAKKLFD--EMQC-RGMTPDITAFTALIDGNLKHGNLQEALVLISR 699
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+D + +++ G+ G + A +++EKG
Sbjct: 700 MTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKG 739
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 163/388 (42%), Gaps = 32/388 (8%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAP---CDHAVQLDLIGRVHGFLSAESYFSNLKDDE 128
LR +++ + V +W+ R+ F P C + + +D G+ AE+ + L +
Sbjct: 146 LRLNRQWEPIITVCEWVLRRS--SFRPDIIC-YNLLIDAYGQKRQLSEAEAAYMALLEAR 202
Query: 129 --KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
T TY LL Y Q +A +M+ GI + YN + K EK
Sbjct: 203 CVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAV 262
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASA 243
+V MK + + +Y + IN YG + + REM+S +P+I TY +
Sbjct: 263 EVYQRMKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNIC----TYTAL 318
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG---NKSEVLRLWDLEKT 300
+ + + L +KA +V ++ ++ + D YN L+ Y+ G SE+ L +E
Sbjct: 319 VNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSL--MEHM 376
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
C+ Y +++A + G H+EAE +E + G + ++ + +G V
Sbjct: 377 GCEP-DRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVAR 435
Query: 361 AEAILEDLVEKGKATTPNSWAVVAA--GYFDAGK---TERGFQCMKAALSVYVEGKGWKP 415
E ++ L + G P+++A+ A Y AG+ ER F M+ P
Sbjct: 436 CEEVMAQLHKSG--LRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGA----SAGAP 489
Query: 416 DPKVITSILSKLGDEGSVQDVEAFVAAL 443
D +++ G G + +EA +L
Sbjct: 490 DTSTYNVLVNAYGRAGYLDRMEAAFRSL 517
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 157/383 (40%), Gaps = 58/383 (15%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD--DEK 129
L K + +A+EV M +K C + + +++ G+ + +S+ F +K +
Sbjct: 252 LLKARCSEKAVEVYQRM-KKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKP 310
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
TY AL+N + R+ +KA F +M++ G YN +M YS+ G + ++
Sbjct: 311 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIF 370
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ-------PHIVLDWSTYAS 242
+ M+ PD SY I ++++G + E +E++ Q H++L S +A
Sbjct: 371 SLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLL-LSAHAR 429
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
+ + + + +V+ + + + D N +++ Y G RL D+E+
Sbjct: 430 SGN-------VARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAG------RLDDMER--- 473
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
L A M+ G+ S + DT N ++ Y G + E
Sbjct: 474 -----------LFAAMERGDGA-----------SAGAPDTSTYNVLVNAYGRAGYLDRME 511
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVI 420
A L +G A +W Y A K E G QC++ V+ E G PD
Sbjct: 512 AAFRSLAARGLAADVVTWTSRIGAY--ARKKEYG-QCLR----VFEEMVDAGCYPDAGTA 564
Query: 421 TSILSKLGDEGSVQDVEAFVAAL 443
+L+ DE V+ V A V ++
Sbjct: 565 KVLLAACSDERQVEQVTAIVRSM 587
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 141/355 (39%), Gaps = 50/355 (14%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMN------RKGICVF 96
GT I P+ L +I L K K++ QA+E+ M R + F
Sbjct: 163 GTNIRPD------------TTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTF 210
Query: 97 APCDHAV----QLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALS 152
H Q++ V + AE N+ +Y AL++ Y +A S
Sbjct: 211 TSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNI-------VSYNALISAYASHGMDKEAFS 263
Query: 153 HFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG 212
F +MK G ++Y ++ + ++ Q + +V MK P+ SY +++YG
Sbjct: 264 VFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYG 323
Query: 213 ARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
+ L ILREME P++V + A+ F K N+ VL AE R
Sbjct: 324 SNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNI----DSVLSAAELRGIH 379
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
+ I N I Y ++G + + L+ + + + + ++ ++ ++EEA
Sbjct: 380 LNTIACNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCF 439
Query: 330 LKEWELSGNSYDTRIP------NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
KE D RIP +++I Y G + AE++ L KG P+
Sbjct: 440 FKEM------LDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSL--KGSGCCPD 486
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 166/429 (38%), Gaps = 58/429 (13%)
Query: 112 HGFLSAESYFSNLKDD------EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
HG + +N+ +D + T+ L+N +AL +KM + G+
Sbjct: 75 HGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPD 134
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS------YGARSDLEG 219
+T+N ++ Y QY K MK NI PD + I I+ YG +
Sbjct: 135 LVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYG-----QA 189
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+EI E + D T+ S H Y I+ V + + + YN LI
Sbjct: 190 IEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALI 249
Query: 280 SLYASLGNKSEVLRLWDLEKTA--CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
S YAS G E ++D K + C ++ Y +++ + + A +V + +
Sbjct: 250 SAYASHGMDKEAFSVFDEMKRSGFCPDVVS--YTSLISTFGRSQQPARAREVFDMMKRNK 307
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV----AAGYFD---- 389
+ NA++ Y +NG + A IL ++ + G PN ++ A G F
Sbjct: 308 CKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDG--IHPNVVSICTLLAACGRFGQKVN 365
Query: 390 -----AGKTERGFQ-----CMKA------------ALSVY--VEGKGWKPDPKVITSILS 425
+ RG C A A+++Y +E K KPD T ++S
Sbjct: 366 IDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILIS 425
Query: 426 KLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGV--DELLDSMKADGIDE 482
++ F + + IP++ ++Y + I A + G+ V + L +S+K G
Sbjct: 426 GCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCP 485
Query: 483 DEETKEILV 491
D T ++
Sbjct: 486 DLVTYTAMI 494
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ R + ++AL F++M ++ I LS+ Y+ ++C YSK GQ K + +
Sbjct: 419 TFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSL 478
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD +Y IN+Y A E + + +EME+ +I LD ++ + K N
Sbjct: 479 KGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEAN-NIQLDSIACSALMKAFNKGN- 536
Query: 253 IDKASDVLKKAEERLEQKDGIGYN 276
+AS+VL AE + ++ GI +N
Sbjct: 537 --QASNVLILAE--IMKEKGIPFN 556
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 155/399 (38%), Gaps = 56/399 (14%)
Query: 104 QLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
+L IG + + + N ++ Y ++ + R + D+A F +M++
Sbjct: 3 ELTQIGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKWRCK 62
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII 223
TYN ++ + + GQ+ +++ +M I P ++ IN+ G+
Sbjct: 63 PDVETYNALINAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCG-------- 114
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
+W +A V KK + D + +N ++S Y
Sbjct: 115 ------------NWR----------------EALRVCKKMTDNGVGPDLVTHNIVLSAYK 146
Query: 284 SLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEW--ELSGNSYD 341
S S+ L ++L K R ++ L+K+ ++ +A ++ + S D
Sbjct: 147 SGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPD 206
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
++I Y G +++ +A+ ++ +G S+ + + Y G K
Sbjct: 207 VVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMD-------K 259
Query: 402 AALSVYVEGK--GWKPDPKVITSILSKLG-DEGSVQDVEAFVAALRTVIPMNRQMYHAFI 458
A SV+ E K G+ PD TS++S G + + E F R N Y+A +
Sbjct: 260 EAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALM 319
Query: 459 KANIRNG---KGVDELLDSMKADGIDEDEETKEILVCTM 494
A NG + VD +L M+ DGI + + +CT+
Sbjct: 320 DAYGSNGYLPQAVD-ILREMEQDGIHPN----VVSICTL 353
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ Y +++ Y +Q Q KA S F +K G +TY ++ YS + +EKV + E
Sbjct: 453 EIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQE 512
Query: 192 MKAKNIFPDNFS 203
M+A NI D+ +
Sbjct: 513 MEANNIQLDSIA 524
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 149/357 (41%), Gaps = 26/357 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ + R + D A M+E G+ S +T+N ++ K G+ E + EM
Sbjct: 192 TYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEM 251
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD SY ++ Y L + EM +Q +V D T+ S H +A
Sbjct: 252 AREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEM-AQKGVVPDVVTFTSLIHAMCRAGN 310
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-RDYI 311
+++A ++ + ER + + + LI + G + L L E C+ + Y
Sbjct: 311 LERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDAL-LAMKEMRECRIQPSVVCYN 369
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++ KLG +EA +++ E E G D + ++ GYC G +A + +++K
Sbjct: 370 VLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKK 429
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G +++ + G + + + + L + G +PD T+++ EG
Sbjct: 430 GVVPDAITYSSLIRGLCEERRLGDACELFEKMLQL-----GLQPDEFTYTTLIDGHCKEG 484
Query: 432 SVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKE 488
+VQ + ++ +M I+ G D + S+ DG+ + TKE
Sbjct: 485 NVQK----------ALSLHDEM--------IKKGVLPDVVTYSVLIDGLSKSARTKE 523
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 154/359 (42%), Gaps = 38/359 (10%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ AL++ + R D AL ++M+E I S + YN ++ Y K G+ ++ +++ EM
Sbjct: 332 TFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEM 391
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+AK + PD +Y ++ Y D + + R+M + +V D TY+S +
Sbjct: 392 EAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKG-VVPDAITYSSLIRGLCEERR 450
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A ++ +K + Q D Y LI + GN + L L D K+ + D +T
Sbjct: 451 LGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHD---EMIKKGVLPDVVT 507
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN--------------------AVI 349
+++ L K +EA+++L + Y+ +P+ A++
Sbjct: 508 YSVLIDGLSKSARTKEAQRLLFKL-----YYEDPVPDNIKYEALMHCCRTAEFKSVVALL 562
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
G+ GL+ A+ + + ++++ + ++V+ G+ G + K L
Sbjct: 563 KGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRC--- 619
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM-NRQMYHAFIKANIRNGKG 467
G+ P+ S++ L +EG + + + L + + + A I N + G G
Sbjct: 620 --GFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALIDLNRKEGVG 676
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 166/367 (45%), Gaps = 26/367 (7%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ-YEKVPDVLTEMKAK 195
+L+ Y R + +A++ F +MK+ G++ S +TYN ++ +Y K G+ ++K+ D+L EM+ +
Sbjct: 238 ILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNE 297
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANL 252
+ D F+ I++ G + + E++S +P V TY + + KA +
Sbjct: 298 GLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTV----TYNALLQVFGKAGI 353
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
+A ++LK+ E+ D + YN L++ Y G E + D T ++ + +
Sbjct: 354 YSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVID---TMTRKGVMPNAVT 410
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T++ A + G+ +A ++ + + SG + N+++ + IL D+
Sbjct: 411 YTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMR 470
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKL 427
G +W + A D GK K V+ E K G++P +++S
Sbjct: 471 INGCPPNRITWNTLLAMCGDKGKH-------KFVNHVFREMKNCGFEPGKDTFNTLISAY 523
Query: 428 GDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDE 484
G GS D + + ++ Y+A + A R G K + +L M+ G +E
Sbjct: 524 GRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNE 583
Query: 485 ETKEILV 491
+ +++
Sbjct: 584 TSFSLML 590
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 176/427 (41%), Gaps = 19/427 (4%)
Query: 28 NKTTLYSIISPLGNPGTRIEP-ELDNWVKNGNKV-RVGELQRIIRDLRKRKRFSQALEVS 85
N T ++I+ G G ++ +L N +K V V I+ L K+ R + +++
Sbjct: 407 NAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKIL 466
Query: 86 DWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVR 143
M G C L + G F +K+ E T+ L++ Y R
Sbjct: 467 SDMRING-CPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGR 525
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
A + +M + G TYN ++ ++ G ++ VL +M+ K P+ S
Sbjct: 526 CGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETS 585
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
+ + ++ Y ++ G+E I +++ I W + I AN +A +++A
Sbjct: 586 FSLMLHCYAKGGNVRGLERIGKDIYDG-QIFPSWVLLRT----LILANFKCRAVRGMERA 640
Query: 264 EERLEQK----DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
E L + D + +N ++S++A ++ DL + + + Y +++ +
Sbjct: 641 FEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYAR 700
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
GE +AE++LK SG S D N +I G+C GL+Q A ++ ++ +G +
Sbjct: 701 RGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFT 760
Query: 380 WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
+ +GY AG RG + Y+ K KP+ I+ QD F
Sbjct: 761 YNTFVSGY--AG---RGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDF 815
Query: 440 VAALRTV 446
+ ++ +
Sbjct: 816 IFGIKNI 822
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 141/326 (43%), Gaps = 7/326 (2%)
Query: 76 KRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQT 133
+ + + L++ D M +G+ F + + GR A+ +F LK E T
Sbjct: 282 RSWDKILDLLDEMRNEGL-QFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVT 340
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y ALL + + +AL+ ++M++ L ++TYN+++ Y + G YE+ V+ M
Sbjct: 341 YNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMT 400
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
K + P+ +Y IN+YG R+ E + L + V + TY S K +
Sbjct: 401 RKGVMPNAVTYTTVINAYG-RAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRS 459
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YIT 312
++ +L + I +N L+++ G V ++ E C +D + T
Sbjct: 460 EEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFR-EMKNCGFEPGKDTFNT 518
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ A + G +A K+ E +G + NA++ G + AE++L D+ KG
Sbjct: 519 LISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKG 578
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQ 398
S++++ Y G RG +
Sbjct: 579 FKPNETSFSLMLHCYAKGGNV-RGLE 603
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/398 (19%), Positives = 157/398 (39%), Gaps = 56/398 (14%)
Query: 105 LDLIGR------VHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
LD++G+ + ++ + S ++K D K + +L R+ + AL K+
Sbjct: 168 LDVLGKSERAILLFEWVVSNSVSGDVKLDSKAVELMIRILG---RESKYSIALKLLDKIP 224
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG--ARSD 216
+L I+ YS+ G+Y++ + MK + P +Y + ++ YG RS
Sbjct: 225 IDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRS- 283
Query: 217 LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
+ + +L EM ++ + D T ++ + LI++A + + + + + YN
Sbjct: 284 WDKILDLLDEMRNE-GLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYN 342
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
L+ ++ K G + EA +LKE E +
Sbjct: 343 ALLQVFG-----------------------------------KAGIYSEALNILKEMEDN 367
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
+ D+ N ++ Y G + +++ + KG ++ V Y AGK +
Sbjct: 368 NCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKA 427
Query: 397 FQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYH 455
Q L ++ G P+ SIL+ LG + +++ ++ +R P NR ++
Sbjct: 428 LQ-----LFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWN 482
Query: 456 AFIKANIRNGKG--VDELLDSMKADGIDEDEETKEILV 491
+ GK V+ + MK G + ++T L+
Sbjct: 483 TLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLI 520
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 156/397 (39%), Gaps = 49/397 (12%)
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
GA+ N Y R+ + +A++ F +M + +YN IM + +G +++ V M+
Sbjct: 81 GAMKN-YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRD 139
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ------------------------ 230
+ I PD +S+ I + S+ S +L M SQ
Sbjct: 140 RGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDE 199
Query: 231 ----------PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
+ L ST+ H K + + +L K +R + YNF I
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQ 259
Query: 281 LYASLGNKSEVLRLWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
G +R+ +++ + +Y ++ L K + +EAE L + G
Sbjct: 260 GLCQKGELDAAVRMVGRLIDQGPKPDVVTYNY--LIYGLCKNSKFQEAEVYLGKLVNEGL 317
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
D+ N +I GYC G+VQ AE IL + V G ++ + G G+T R
Sbjct: 318 EPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALA 377
Query: 399 CMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHA 456
AL GKG KP+ + +++ L ++G + + + + + +IP Q ++
Sbjct: 378 LFNEAL-----GKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIP-EVQTFNI 431
Query: 457 FIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
+ + G D L+ M + G D T IL+
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +LLN + + + + ++ M E G A + T+N ++ + + +K +L EM
Sbjct: 498 TYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEM 557
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K K++ PD ++ I+ + DL+G + R+ME + TY H + +
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLN 617
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN 287
+ A + ++ +R DG Y ++ + GN
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN 652
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 145/370 (39%), Gaps = 25/370 (6%)
Query: 15 NAVFSRFYYTNRINKTTLYSIISPLGNPG--TRIEPELDNWVKNGNKVRVGELQRIIRDL 72
NAVF+ F ++ T S+I L + G R + + G K V +I+ L
Sbjct: 346 NAVFNGFV----PDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 73 RKRKRFSQALEVSDWMNRKG---------ICVFAPCDHAVQLDLIGRVHGFLSAESYFSN 123
+ +A +++ M+ KG I V C D G V +S + YF +
Sbjct: 402 SNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS-KGYFPD 460
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ T+ L++ Y Q + + AL M + G+ TYN ++ KT +YE
Sbjct: 461 I-------FTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYE 513
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
V + M K P+ F++ I + S L+ +L EM+++ + D T+ +
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNK-SVNPDAVTFGTL 572
Query: 244 AHFYIKANLIDKASDVLKKAEE-RLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
+ K +D A + +K EE + YN +I + N + +L+ C
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
Y M++ K G + K L E +G VI C V A
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAA 692
Query: 363 AILEDLVEKG 372
I+ +V+KG
Sbjct: 693 GIIHRMVQKG 702
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 154/398 (38%), Gaps = 48/398 (12%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y ++ + + D+ F KM G++L T+N ++ + K G ++ +L ++
Sbjct: 184 YCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVI 243
Query: 194 AKNIFPDNFSYRICINSYGARSDLEG-MEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + P+ F+Y I + +L+ + ++ R ++ P D TY + K +
Sbjct: 244 KRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKP--DVVTYNYLIYGLCKNSK 301
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLI--------------------------------S 280
+A L K + D YN LI S
Sbjct: 302 FQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRS 361
Query: 281 LYASLGNKSEVLRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSG 337
L L ++ E R L A + I + I T+++ L G EA ++ E G
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKG 421
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+ + N ++ G C G V +A+ +++ ++ KG ++ ++ GY K E
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHA 456
+ + + G PD S+L+ L +DV E + + N ++
Sbjct: 482 EILDVMMD-----NGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 457 FIKANIRNGKGVDE---LLDSMKADGIDEDEETKEILV 491
+++ R K +D+ LL+ MK ++ D T L+
Sbjct: 537 LLESLCRYHK-LDKALGLLEEMKNKSVNPDAVTFGTLI 573
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 172/400 (43%), Gaps = 50/400 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYGA++N ++ D ALS +KM++ I + YN I+ K + + +M
Sbjct: 222 TYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKM 281
Query: 193 KAKNIFPDNFSYR---ICINSYGARSDLEGMEIILREMESQPHIVL-------------- 235
+ K I PD F+Y C+ +YG SD + + E + P++V
Sbjct: 282 ETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 236 -----------------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
D TY+S + + + +D+A + + + + + YN L
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYI---NRDYITMLEALMKLGEHEEAEKVLKEWEL 335
I + E + L+ + +R + Y T+++ L + G+ + A+K+ K+
Sbjct: 402 IKGFCKAKRVEEGMELF---REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G D + ++ G C G ++ A + E L + ++ ++ G AGK E
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT--VIPMNRQM 453
G+ + +LS+ KG KP+ + T+++S +G ++ +A ++ +P +
Sbjct: 519 GWD-LFCSLSL----KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP-DSGC 572
Query: 454 YHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
Y+ I+A +R+G EL+ M++ G D T +++
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 42/307 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMG-----IALSTLT--------YNDIMCLYSKT 179
+Y L+NC+ R+ Q AL+ KM ++G + LS+L +D + L +
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 176
Query: 180 GQYEKVPDVLT----------------------EMKAKNIFPDNFSYRICINSYGARSDL 217
+ PD +T +M + PD +Y +N R D+
Sbjct: 177 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDI 236
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
+ +L++ME + I D Y + K ID A + K E + + D YN
Sbjct: 237 DLALSLLKKME-KGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNS 295
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWE 334
LIS + G S+ RL +R IN + +T +++A +K G+ EAEK+ E
Sbjct: 296 LISCLCNYGRWSDASRLL---SNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
D +++I G+C + + A+ + E ++ K ++ + G+ A + E
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 395 RGFQCMK 401
G + +
Sbjct: 413 EGMELFR 419
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 125/307 (40%), Gaps = 33/307 (10%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+D +VK G V E +++ ++ KR S +N G C+ D A +
Sbjct: 332 IDAFVKEGKLV---EAEKLYDEMIKRSIDPDIFTYSSLIN--GFCMHDRLDEAKHM---- 382
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+ ++ F N+ TY L+ + + ++ ++ + FR+M + G+ +T+TY
Sbjct: 383 --FELMISKDCFPNV-------VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ + G + + +M + + PD +Y I ++ LE ++ ++
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ- 492
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + D TY KA ++ D+ + + + I Y +IS + G K
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 290 EVLRLW-------DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
E L+ L + C Y T++ A ++ G+ + +++KE G D
Sbjct: 553 EADALFREMKEDGTLPDSGC-------YNTLIRARLRDGDKAASAELIKEMRSCGFVGDA 605
Query: 343 RIPNAVI 349
+ VI
Sbjct: 606 STISMVI 612
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 115/251 (45%), Gaps = 8/251 (3%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY +++ + +T A+ +M++ G + + TYN I+ + + ++ +L
Sbjct: 79 TVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKML 138
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM + FPD +Y I ++ L M P +V +Y + + K
Sbjct: 139 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVV----SYTTVINGLCK 194
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINR 308
+ +D AS +L + R D + Y+ LI + G + L D + K C+ +
Sbjct: 195 SGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 254
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++L AL +LG +AE +L E E G + D NA I G C V+ A+A+ + +
Sbjct: 255 -YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRM 313
Query: 369 VEKGKATTPNS 379
VE+G TPN+
Sbjct: 314 VERG--CTPNA 322
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 150/339 (44%), Gaps = 20/339 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L++ + + + ++A+ M ++G + + YN ++ + G K D+L EM
Sbjct: 219 TYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEM 278
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD SY CI+ ++ + + M + + S+Y+ K
Sbjct: 279 ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRM-VERGCTPNASSYSMLVEELCKKKE 337
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+D A ++++A E+ + D + Y L+ G E L+ L++ C+ + Y
Sbjct: 338 LDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFF-Y 396
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
ML++ K + ++A ++ K+ L N + N ++ G C + + +AE +L +V+
Sbjct: 397 NVMLDSHCKRRQIDKALQIHKQM-LERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVD 455
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG--KGWKPDPKVITSILSKLG 428
+G ++ + GK+ AAL ++ E G PD +++++ L
Sbjct: 456 EGFIPDFVTYGTLVDAMCKCGKS-------AAALELFEEAVKGGCVPDVVTYSALITGLV 508
Query: 429 DEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKG 467
E + EA++ + ++ +++A I NG G
Sbjct: 509 HENMAE--EAYLLFTK----LDVALWNAMILGYAENGSG 541
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 5/149 (3%)
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-L 294
D T+A ++N ++KA +L + +E D YN LIS Y+ + + + L
Sbjct: 9 DAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFL 68
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
++ K C + Y +++ L K G ++A K+L E G S + N ++ G C
Sbjct: 69 AEMVKNHCLPTVVT-YTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127
Query: 355 NGLVQNAEAILEDLVEKG---KATTPNSW 380
+ A+ +LE++ +G T NS+
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSF 156
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 129/313 (41%), Gaps = 19/313 (6%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDL 107
LD+ +K G + + ++ L + +A ++ M R+G F P + +D
Sbjct: 240 LDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG---FTPDVVSYNACIDG 296
Query: 108 IGRVHGFLSAESYFSNLKDDEKT--YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
+ + A++ F + + T +Y L+ ++++ D A++ + +E +
Sbjct: 297 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVD 356
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF-PDNFSYRICINSYGARSDLE-GMEII 223
L Y ++ K G++++ + +++ + I PD F Y + ++S+ R ++ ++I
Sbjct: 357 ILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIH 416
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
+ +E V+ W+ + L D + +L +E D + Y L+
Sbjct: 417 KQMLERNCCNVVTWNILVHG--LCVDDRLSDAETMLLTMVDEGF-IPDFVTYGTLVDAMC 473
Query: 284 SLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
G + L L++ A K D +T + L AE E L D
Sbjct: 474 KCGKSAAALELFE---EAVKGGCVPDVVTYSALITGLVHENMAE----EAYLLFTKLDVA 526
Query: 344 IPNAVIIGYCNNG 356
+ NA+I+GY NG
Sbjct: 527 LWNAMILGYAENG 539
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 169/415 (40%), Gaps = 26/415 (6%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--K 125
+IR L R R AL V D M +G C + +++ LD + G+ A + K
Sbjct: 168 LIRALCVRGRVPDALAVFDDMLHRG-CSPSVVTYSILLDATCKASGYRQAMVLLDEMRAK 226
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
E TY L+N + D+AL+ + G +TY ++ + ++++V
Sbjct: 227 GCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEV 286
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
++ EM + PD ++ + S + L I + + S+ + D TY+S
Sbjct: 287 EELFAEMASNKCAPDEVTFNTIVTSL-CQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILD 345
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
+D A ++L + + + D I Y ++ S+ W+ +
Sbjct: 346 GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQ-------WEHAEELMAEM 398
Query: 306 INRD-------YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
+ D + T++ +L + G + A KV+++ +G + D N++I G CN +
Sbjct: 399 VCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCI 458
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
+A +L +L G ++ + G + E Q M V + PD
Sbjct: 459 DDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLM-----VNMMHSDCPPDAT 513
Query: 419 VITSILSKLGDEG-SVQDVEAF-VAALRTVIPMNRQMYHAFIKANIRNGKGVDEL 471
++++ L +G +Q +E + A IP N+ Y+ + A ++ GK + L
Sbjct: 514 TFNTVITSLCQKGLLLQAIETLKIMAENGCIP-NQSTYNIVVDALLKAGKTQEAL 567
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 135/325 (41%), Gaps = 19/325 (5%)
Query: 115 LSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
L AE + DE T+ T ++ +Q D+A+ M E G +TY+ I+
Sbjct: 289 LFAEMASNKCAPDEVTFNT---IVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILD 345
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQP 231
G+ + ++L+ +K+ PD +Y + + E E ++ EM + P
Sbjct: 346 GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPP 405
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
D T+ + + L+D+A V+++ E D + YN +I + +
Sbjct: 406 ----DEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDA 461
Query: 292 LRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
+ L +L+ CK I + T+L+ L + E+AE+++ S D N VI
Sbjct: 462 MELLSNLQSYGCKPDI-VTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVIT 520
Query: 351 GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG 410
C GL+ A L+ + E G +++ +V AGKT+ + LS G
Sbjct: 521 SLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALK----LLSGMTNG 576
Query: 411 KGWKPDPKVITSILSKLGDEGSVQD 435
PD +++S + G +++
Sbjct: 577 ---TPDLITYNTVISNITKAGKMEE 598
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 153/398 (38%), Gaps = 46/398 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+ + + AL+ F M G + S +TY+ ++ K Y + +L EM
Sbjct: 164 TFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEM 223
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVL-------------- 235
+AK PD +Y + IN+ D++ IL ++ S +P V
Sbjct: 224 RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERW 283
Query: 236 -----------------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
D T+ + + L+D+A V+ E D + Y+ +
Sbjct: 284 KEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSI 343
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
+ +G + + L K+ + Y T+L+ L + + E AE+++ E S
Sbjct: 344 LDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDC 403
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
D N VI C GLV A ++E + E G N V D ER
Sbjct: 404 PPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGC----NPDIVTYNSIIDGLCNER--- 456
Query: 399 CMKAALSVY--VEGKGWKPDPKVITSILSKLGDEGSVQDVEAF-VAALRTVIPMNRQMYH 455
C+ A+ + ++ G KPD ++L L +D E V + + P + ++
Sbjct: 457 CIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFN 516
Query: 456 AFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
I + + G + E L M +G ++ T I+V
Sbjct: 517 TVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVV 554
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 140/366 (38%), Gaps = 27/366 (7%)
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
KG+C +HA +L AE S+ DE T+ T A L ++ D+A
Sbjct: 380 KGLCSIEQWEHAEEL----------MAEMVCSDCPPDEVTFNTVIASL---CQKGLVDRA 426
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+ +M E G +TYN I+ + ++L+ +++ PD ++ +
Sbjct: 427 IKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKG 486
Query: 211 YGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
+ E E ++ M + P D +T+ + + L+ +A + LK E
Sbjct: 487 LCSVDRWEDAEQLMVNMMHSDCPP----DATTFNTVITSLCQKGLLLQAIETLKIMAENG 542
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAE 327
+ YN ++ G E L+L I Y T++ + K G+ EEA
Sbjct: 543 CIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLIT--YNTVISNITKAGKMEEAL 600
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
+L+ +G S DT ++ G C A +L L + G + + + G+
Sbjct: 601 DLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGF 660
Query: 388 FDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVI 447
+T+ C +S G PD +L L E + + + + L ++
Sbjct: 661 CQNWRTDIAIDCFAHMVS-----SGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLG 715
Query: 448 PMNRQM 453
+++ +
Sbjct: 716 VLDKSL 721
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L R+ TD+A+ ++++MG++ YNDI+ + + + + D M
Sbjct: 617 TYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHM 676
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
+ PD +Y I + + L+ + +L + S VLD S +H+
Sbjct: 677 VSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLG--VLDKSLIEEESHY 728
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 149/355 (41%), Gaps = 29/355 (8%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L++ + RQ+++ + S +M MG+ + Y ++ + K V EM
Sbjct: 305 YATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMF 364
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
A+ I + F+Y I+ DLE E + EM + I D TY Y K +
Sbjct: 365 ARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEM-TMMGIKPDIQTYNCLIEGYYKVQNM 423
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL------WDLEKTACKRYIN 307
+KA ++L + ++ + +++ G+ + L W L+
Sbjct: 424 EKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVI---- 479
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+++ L+K G EEA K+L + G S D N VIIG+C G ++ ++ L +
Sbjct: 480 --YTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVE 537
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILS 425
++ KG ++ GY AG+ M+AA ++E G P+ + T ++
Sbjct: 538 MIAKGLKPNVYTYGAFIHGYCRAGE-------MQAAERSFIEMLDSGIAPNDVICTDLID 590
Query: 426 KLGDEGSVQDVEA-FVAALRTVIPMNRQMYHAFIKANIRNGK-----GV-DELLD 473
+G+ A F L + + Q + I +NGK GV ELLD
Sbjct: 591 GYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLD 645
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 153/362 (42%), Gaps = 53/362 (14%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L++ Y + T KA + FR M + G+ T++ ++ SK G+ ++ V +E+ K
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLI 253
+ PD F+Y I++ DL+ + +M + P+IV TY + + K I
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIV----TYNALINGLCKLGEI 703
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
KA ++ E+ ++ + Y+ +I+ Y N +E +L+ K
Sbjct: 704 AKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMK-------------- 749
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
L G D+ + A+I G C G + A ++ +VE+G
Sbjct: 750 ---------------------LVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI 788
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
A+TP ++ + G+F GK +Q ++ + ++ P+ T ++ G++
Sbjct: 789 ASTP-AFNALIDGFFKLGKLIEAYQLVEDMVDNHI-----TPNHVTYTILIEYHCTVGNI 842
Query: 434 QDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEI 489
++ E + R V+P N Y + + R G+ + L D M A GI D+ +
Sbjct: 843 KEAEQLFMEMQKRNVMP-NVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSV 901
Query: 490 LV 491
+V
Sbjct: 902 MV 903
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 182/441 (41%), Gaps = 36/441 (8%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I ++KR ++ + D M G+ P DH LI +GF+ +
Sbjct: 308 LIDGFCRQKRSTEGKSMLDEMYTMGL---KP-DHVAYTALI---NGFVKQSDIGGAFQVK 360
Query: 128 EKTYQ--------TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
E+ + TY AL++ + +KA F +M MGI TYN ++ Y K
Sbjct: 361 EEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKV 420
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLD 236
EK ++L E+K +N+ + + +N DL + +EM S +P+IV+
Sbjct: 421 QNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVI- 479
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
Y + +K ++A +L +++ D YN +I + G K E + +
Sbjct: 480 ---YTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAG-KMEEGKSYL 535
Query: 297 LEKTACKRYIN-RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
+E A N Y + + GE + AE+ E SG + + I +I GYC +
Sbjct: 536 VEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKD 595
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGW 413
G A A ++++G + +V+ G GK ++ A+ V+ E KG
Sbjct: 596 GNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGK-------LQEAMGVFSELLDKGL 648
Query: 414 KPDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDE 470
PD TS++S L EG ++ E + I N Y+A I + G+ E
Sbjct: 649 VPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARE 708
Query: 471 LLDSMKADGIDEDEETKEILV 491
L D + G+ + T ++
Sbjct: 709 LFDGIPEKGLARNSVTYSTII 729
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 160/384 (41%), Gaps = 38/384 (9%)
Query: 7 LSTNTQIHNA--VFSRFYYTNRINKTTLY-SIISPLGNPG-TRIEPEL-DNWVKNGNKVR 61
LS N ++ A VFS + Y S+IS L G + EL D+ K G
Sbjct: 627 LSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPN 686
Query: 62 VGELQRIIRDLRKRKRFSQALEVSDWMNRKGIC---------VFAPCDHAVQLDLIGRVH 112
+ +I L K ++A E+ D + KG+ + C A + H
Sbjct: 687 IVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFH 746
Query: 113 GF----LSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLT 168
G + +S+ Y AL++ + T+KALS F M E GIA ST
Sbjct: 747 GMKLVGVPPDSF------------VYCALIDGCCKAGNTEKALSLFLGMVEEGIA-STPA 793
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
+N ++ + K G+ + ++ +M +I P++ +Y I I + +++ E + EM+
Sbjct: 794 FNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQ 853
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE---QKDGIGYNFLISLYASL 285
+ +++ + TY S H Y N I + S++ +E + + D + ++ ++ +
Sbjct: 854 KR-NVMPNVLTYTSLLHGY---NRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKE 909
Query: 286 GNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
GN + L+L D + Y +++AL K E KVL E E G+
Sbjct: 910 GNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATC 969
Query: 346 NAVIIGYCNNGLVQNAEAILEDLV 369
++ + G A +LE +V
Sbjct: 970 GTLVCCFHRAGRTDEALRVLESMV 993
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 129/312 (41%), Gaps = 39/312 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+N + + KA F + E G+A +++TY+ I+ Y K+ + + M
Sbjct: 689 TYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGM 748
Query: 193 KAKNIFPDNFSYRICINSYGARSDLE-GMEIILREME----SQP---------------- 231
K + PD+F Y I+ + E + + L +E S P
Sbjct: 749 KLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLI 808
Query: 232 ------------HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
HI + TY ++ I +A + + ++R + + Y L+
Sbjct: 809 EAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLL 868
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELS 336
Y +G +SE+ L+D E A R I D + M++A +K G +A K++ +
Sbjct: 869 HGYNRIGRRSEMFSLFD-EMVA--RGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSE 925
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G + + +I C + + +L+++ ++G + + + + AG+T+
Sbjct: 926 GVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEA 985
Query: 397 FQCMKAALSVYV 408
+ +++ + ++
Sbjct: 986 LRVLESMVRSFL 997
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 149/354 (42%), Gaps = 11/354 (3%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ + ++ +KA F +M + GI+ TYN ++ K +K +L +M
Sbjct: 219 YNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMV 278
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
K + PDN++Y I Y + + + ++M SQ I+ D T S K I
Sbjct: 279 DKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQ-GILPDVVTLNSLMASLCKHGKI 337
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
A DV + ++ D Y +++ YA+ G ++ L++L + + + +
Sbjct: 338 KDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVL 397
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
++A K G + A + E G D + VI C G + +A ++++G
Sbjct: 398 IKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGV 457
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAA-LSVYVEGKGWKPDPKVITSILSKLGDEGS 432
A + +++ + G+ G +KA L + + KG +PD I++ L G
Sbjct: 458 APSISTYHFLIQGFCTHGDL------LKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGR 511
Query: 433 VQDVE-AFVAALRTVIPMNRQMYHAFIKANIRNGKGVDEL--LDSMKADGIDED 483
V D + F + + N +Y+ + GK + L D M + GI +
Sbjct: 512 VMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPN 565
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 150/401 (37%), Gaps = 46/401 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+ Y Q +A+ +KM GI +T N +M K G+ + DV M
Sbjct: 288 TYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSM 347
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K D FSY+I +N Y + L + + M S I D + Y K +
Sbjct: 348 AMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSD-GIAPDSHIFNVLIKAYAKCGM 406
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLG-------------------------- 286
+D+A+ + + E+ + D + Y+ +I+ +G
Sbjct: 407 LDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHF 466
Query: 287 ------NKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSG 337
++L+ DL + + D + ++ L KLG +A+ + G
Sbjct: 467 LIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIG 526
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+ + N ++ GYC G ++NA + + +V G + + GY G+ + G
Sbjct: 527 LHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGL 586
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG-SVQDVEAFVAALRTVIPMNRQMYHA 456
+ L KG KP + IL L G +V F + I M+R Y
Sbjct: 587 SLFREILH-----KGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSI 641
Query: 457 FIKANIRNGKGVDE---LLDSMKADGIDEDEETKEILVCTM 494
+ +N DE L + A + D T I++ M
Sbjct: 642 VLGGLFKNSCS-DEAILLFKELHAMNVKIDITTLNIMIAGM 681
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 149/381 (39%), Gaps = 57/381 (14%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MCLYSKTGQYEKVP 186
T TYG L++C R + L+ F ++ + G+ + T+ +++ +C +T E +
Sbjct: 107 TLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTA--EALD 164
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVL----------- 235
+L M PD FSY I + S + + +LR M + L
Sbjct: 165 ILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVID 224
Query: 236 -------------------------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
D STY + KA +DKA +L++ ++
Sbjct: 225 GFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLP 284
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAE 327
D YN LI Y+S G E +R + K + I D +T ++ +L K G+ ++A
Sbjct: 285 DNWTYNSLIYGYSSTGQWKEAVR---VSKKMTSQGILPDVVTLNSLMASLCKHGKIKDAR 341
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
V + G D ++ GY G + + + ++ G A + + V+ Y
Sbjct: 342 DVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAY 401
Query: 388 FDAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEGSVQD-VEAFVAALR 444
G +R A ++ E + G +PD +++++ L G + D VE F +
Sbjct: 402 AKCGMLDR-------ATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMID 454
Query: 445 TVIPMNRQMYHAFIKANIRNG 465
+ + YH I+ +G
Sbjct: 455 QGVAPSISTYHFLIQGFCTHG 475
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 140/350 (40%), Gaps = 24/350 (6%)
Query: 51 DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGR 110
DNW N +I ++ +A+ VS M +GI +++ L
Sbjct: 285 DNWTYNS----------LIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK- 333
Query: 111 VHGFL-SAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
HG + A F ++ K + +Y +LN Y + F M GIA +
Sbjct: 334 -HGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSH 392
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
+N ++ Y+K G ++ + EM+ + + PD +Y I + ++ +M
Sbjct: 393 IFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQM 452
Query: 228 ESQPHIVLDWSTYASAAHFYIKANLID----KASDVLKKAEERLEQKDGIGYNFLISLYA 283
Q + STY HF I+ KA D++ + + + D +NF+I+
Sbjct: 453 IDQ-GVAPSISTY----HFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLC 507
Query: 284 SLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
LG + ++D + Y T+++ +G+ E A +V +G +
Sbjct: 508 KLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVV 567
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
+ ++ GYC G + ++ +++ KG + + ++ G F AG+T
Sbjct: 568 VYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRT 617
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 152/362 (41%), Gaps = 50/362 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ ++N + + KA MK G + S +TYN I+ Y K G+ K +L EM
Sbjct: 231 TFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEM 290
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIV--------------L 235
AK I P+ ++ I I+ + ++ + + EM+ QP++V L
Sbjct: 291 VAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL 350
Query: 236 DWS-----------------TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
D + TY + + + K ++ +A ++L +R + I +N L
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410
Query: 279 ISLYASLGNKSE--VLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
I Y G + +LR L+ C Y ++ + G +EA K+ KE E +
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNV--STYNCLIVGFCREGNVKEARKLAKEMEGN 468
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G D N ++ C G + A +L+++ E G + ++ + GYF G +
Sbjct: 469 GLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNST-- 526
Query: 397 FQCMKAALSV--YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQ 452
AAL+V +E KG + + ++ ++G +++ + + + +IP NR
Sbjct: 527 -----AALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIP-NRT 580
Query: 453 MY 454
Y
Sbjct: 581 TY 582
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/360 (18%), Positives = 141/360 (39%), Gaps = 48/360 (13%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
+L V++ + S +++M I ++ +T++ ++ K G+++K DV+ +MKA
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
P +Y I+ Y + + +L+EM ++ I + T+ + + + A
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAK-RIHPNEITFNILIDGFCRDENVTAA 318
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
V ++ + + Q + + YN LI+ S G E L L D
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQD-------------------- 358
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIP--NAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
++SG + NA+I G+C +++ A +L+D+ ++G A
Sbjct: 359 -----------------KMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLA 401
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
++ + Y AG+ + F L G P+ ++ EG+V+
Sbjct: 402 PNVITFNTLIDAYGKAGRMDDAFLLRSMMLDT-----GVCPNVSTYNCLIVGFCREGNVK 456
Query: 435 DVEAFVAALR-TVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
+ + + + Y+ + A + G + LLD M G++ T L+
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALI 516
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
++ TY AL++ Y R+ + AL+ M++ G + +TYN ++ + G+ E+ +L
Sbjct: 508 SHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLL 567
Query: 190 TEMKAKNIFPDNFSYRI 206
EM K + P+ +Y I
Sbjct: 568 NEMLEKGLIPNRTTYDI 584
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 142/313 (45%), Gaps = 12/313 (3%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L++ ++ + ++A F ++ + G+ + +++N ++ Y K+G ++ + M
Sbjct: 228 FNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM 287
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+FPD F+Y + IN L+ + EM + +V + T+ + + +
Sbjct: 288 ENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDR-GLVPNDVTFTTLINGHCVTGRA 346
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---Y 310
D ++ ++ + + D I YN LI+ +G+ E +L +E T +R + D Y
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV-IEMT--QRGLKPDKFTY 403
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+++ K G+ E A ++ KE G D A+I G+C G V AE L +++E
Sbjct: 404 TMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLE 463
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G ++ +V G+ G + GF+ +K ++ G P +L+ L +
Sbjct: 464 AGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE-----MQCDGHVPGVVTYNVLLNGLCKQ 518
Query: 431 GSVQDVEAFVAAL 443
G +++ + A+
Sbjct: 519 GQMKNANMLLDAM 531
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 135/326 (41%), Gaps = 19/326 (5%)
Query: 94 CVFAP--CDHAVQLDLIGRVHGFLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDK 149
C + P C V + + + H A+ F + + T ++ L+N Y + D+
Sbjct: 219 CGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQ 278
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
R M E + TY+ ++ K GQ + + EM + + P++ ++ IN
Sbjct: 279 GFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLIN 338
Query: 210 SY--GARSDLEGMEIILREMES--QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
+ R+DL GMEI + + +P ++ TY + + K + +A ++ + +
Sbjct: 339 GHCVTGRADL-GMEIYQQMLRKGVKPDVI----TYNTLINGLCKVGDLREAKKLVIEMTQ 393
Query: 266 RLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGE 322
R + D Y LI G+ L ++ K K I D + ++ + G+
Sbjct: 394 RGLKPDKFTYTMLIDGCCKEGDLESAL---EIRKEMVKEGIELDNVAFTALISGFCREGQ 450
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
EAE+ L+E +G D VI G+C G V+ +L+++ G ++ V
Sbjct: 451 VIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYV 408
+ G G+ + + A L++ V
Sbjct: 511 LLNGLCKQGQMKNANMLLDAMLNLGV 536
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 165/391 (42%), Gaps = 38/391 (9%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAP---CDHAVQLDLIGRVHGFLSAESYFSNLKDDE 128
LR +++ + V +W+ R+ F P C + + +D G+ AE+ + L +
Sbjct: 146 LRLNRQWEPIITVCEWVLRRS--SFRPDIIC-YNLLIDAYGQKRQLSEAEAAYMALLEAR 202
Query: 129 --KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
T TY LL Y Q +A +M+ GI + YN + K EK
Sbjct: 203 CVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAV 262
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASA 243
+V MK + + +Y + IN YG + + REM+S +P+I TY +
Sbjct: 263 EVYQRMKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNIC----TYTAL 318
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG---NKSEVLRLWDLEKT 300
+ + + L +KA +V ++ ++ + D YN L+ Y+ G SE+ L +E
Sbjct: 319 VNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSL--MEHM 376
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
C+ Y +++A + G H+EAE +E + G + ++ + +G V
Sbjct: 377 GCEP-DRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVAR 435
Query: 361 AEAILEDLVEKGKATTPNSWAVVAA--GYFDAGK---TERGFQCMKAALSVYVEGKG--- 412
E ++ L + G P+++A+ A Y AG+ ER F M+ G G
Sbjct: 436 CEEVMAQLHKSG--LRPDTFALNAMLNAYGRAGRLDDMERLFAAME-------RGDGAIA 486
Query: 413 WKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
PD +++ G G + +EA +L
Sbjct: 487 GAPDTSTYNVMVNAYGRAGYLDRMEAAFRSL 517
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 145/378 (38%), Gaps = 54/378 (14%)
Query: 109 GRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
G++H AE S ++ + T Y A L+ ++ R ++KA+ +++MK+ +T
Sbjct: 221 GQLH---RAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNT 277
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
TY ++ +Y K Q V EMK+ P+ +Y +N++ E E + E
Sbjct: 278 ETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEE 337
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
M+ H D Y + Y +A L AS++ E + D YN L+ + G
Sbjct: 338 MQQAGH-EPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAG 396
Query: 287 NKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG--------- 337
E + K R + ++ +L A + G E+V+ + SG
Sbjct: 397 LHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALN 456
Query: 338 ---NSY---------------------------DTRIPNAVIIGYCNNGLVQNAEAILED 367
N+Y DT N ++ Y G + EA
Sbjct: 457 AMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRS 516
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILS 425
L +G A +W Y A K E G QC++ V+ E G PD +L+
Sbjct: 517 LAARGLAADVVTWTSRIGAY--ARKKEYG-QCLR----VFEEMVDAGCYPDAGTAKVLLA 569
Query: 426 KLGDEGSVQDVEAFVAAL 443
DE V+ V+A V ++
Sbjct: 570 ACSDERQVEQVKAIVRSM 587
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 158/365 (43%), Gaps = 32/365 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ AL++ + ++ D AL +M++ GI S + YN ++ Y K G+ + +++ EM
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+AK + PD +Y I+ Y +L+ + ++M + ++ D TY+S +
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKK-GVLPDAITYSSLIRGLCEEKR 448
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
++ A ++ + + Q D Y LI + GN + L L D + K + Y
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT--Y 506
Query: 311 ITMLEALMKLGEHEEAEKVL---------------KEWELSGNSYDTRIPNAVIIGYCNN 355
++ L K +EA ++L L + + + A++ G+C
Sbjct: 507 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMK 566
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
GL++ A+ + + ++++ + ++++ G+ G + K L G+ P
Sbjct: 567 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLR-----SGFSP 621
Query: 416 DPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM-NRQMYHAFIKANIRNGKGVDELLDS 474
+ S++ L +EG V + + + L T P+ + + A I N + G +D
Sbjct: 622 NSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEG------MDY 675
Query: 475 MKADG 479
+A G
Sbjct: 676 FQAQG 680
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 154/356 (43%), Gaps = 20/356 (5%)
Query: 147 TDKALSHFRK----MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
+D +L R+ M G+A + TYN ++ G+ E+ V+ +M+ P+
Sbjct: 129 SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAV 188
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
+Y + ++ +L+G E ++ M + + + T+ S + KA ++ A V +
Sbjct: 189 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMK 319
D + YN L+S Y +G E L ++ E T +R + D +T ++ A K
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFS-EMT--QRGLVPDVVTFTSLIHATCK 305
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
G E+A ++ + G + A+I G+C G + +A +E++ + G +
Sbjct: 306 AGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVC 365
Query: 380 WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
+ + GY G+ + + ++ +E K KPD ++I+S G++
Sbjct: 366 YNALINGYCKLGRMDLARELIRE-----MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420
Query: 440 VAAL--RTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
+ + V+P + Y + I+ + D EL ++M G+ DE T L+
Sbjct: 421 NQKMLKKGVLP-DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLI 475
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 170/402 (42%), Gaps = 20/402 (4%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L + +++G V ++R L R R +A+ V M G C + +
Sbjct: 140 LSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAG-CAPNAVTYNTLVAAFC 198
Query: 110 RVHGFLSAESYFSNLKDD---EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
R AE S ++++ + T+ +++N + + + A F +M G+A
Sbjct: 199 RAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDV 258
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
++YN ++ Y K G + V +EM + + PD ++ I++ +LE ++ +
Sbjct: 259 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
M + + ++ T+ + + K +D A +++ + Q + YN LI+ Y LG
Sbjct: 319 MRER-GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377
Query: 287 N---KSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
E++R ++E K + Y T++ K+G + A ++ ++ G D
Sbjct: 378 RMDLARELIR--EMEAKRVKPDV-VTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAA 403
+++I G C + +A + E++++ G ++ + G+ G E+ A
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK-------A 487
Query: 404 LSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
LS++ E KG PD + +++ L ++ + L
Sbjct: 488 LSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 159/370 (42%), Gaps = 25/370 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG +LN + QT A+ RKM+E I L + Y+ I+ K G + ++ EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+ K D +Y I + + +LR+M + P++V T++ ++K
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV----TFSVLIDSFVK 345
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ +A +LK+ +R + I YN LI + E +++ DL + + D
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL---MISKGCDPD 402
Query: 310 YIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+T ++ K ++ ++ +E L G +T N ++ G+C +G ++ A+ + +
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSIL 424
++V + S+ ++ G D G+ E+ AL ++ +E + D + I+
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEK-------ALEIFGKIEKSKMELDIGIYMIII 515
Query: 425 SKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGID 481
+ + V D + F + + ++ + Y+ I R D L M +G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 482 EDEETKEILV 491
DE T IL+
Sbjct: 576 PDELTYNILI 585
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 150/349 (42%), Gaps = 24/349 (6%)
Query: 62 VGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYF 121
V + R+ + K K++ L + M KGI + ++ ++ R A S
Sbjct: 88 VIDFNRLFSAIAKTKQYELVLALCKQMESKGI-AHSIYTLSIMINCFCRCRKLSYAFSTM 146
Query: 122 SNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MCLY 176
+ E + LLN + + +AL +M EMG + +T N + +CL
Sbjct: 147 GKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLN 206
Query: 177 SKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLD 236
K + D + E + P+ +Y +N +LR+ME + +I LD
Sbjct: 207 GKVSDAVVLIDRMVETGFQ---PNEVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLD 262
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
Y+ K +D A ++ + E + + D I YN LI + + G WD
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR-------WD 315
Query: 297 ----LEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
L + KR I+ + +T ++++ +K G+ EA+++LKE G + +T N++I
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
G+C ++ A +++ ++ KG ++ ++ GY A + + G +
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 149/369 (40%), Gaps = 17/369 (4%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T T L+N + A+ +M E G + +TY ++ + K+GQ ++L
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+M+ +NI D Y I I+ L+ + EME + D TY + +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA-DIITYNTLIGGFCN 310
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A D + +L+ +R + + ++ LI + G E +L K +R I +
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL---KEMMQRGIAPN 367
Query: 310 YIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
IT +++ K EEA +++ G D N +I GYC + + +
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
++ +G ++ + G+ +GK E + + +S V +PD +L
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV-----RPDIVSYKILLDG 482
Query: 427 LGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD---ELLDSMKADGIDE 482
L D G ++ +E F ++ + ++ +Y I + N VD +L S+ G+
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG-MCNASKVDDAWDLFCSLPLKGVKL 541
Query: 483 DEETKEILV 491
D I++
Sbjct: 542 DARAYNIMI 550
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 147/356 (41%), Gaps = 42/356 (11%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
L DEKT+ T L+ ++ + + AL +M G S +T N ++ Y K G+ E
Sbjct: 242 LSPDEKTFTT---LMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIE 298
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSY----GARSDLEGMEIILRE------------- 226
+V + EM + PD F++ +N + LE ++++L+E
Sbjct: 299 EVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLI 358
Query: 227 ------------MESQPHIVL-DWS----TYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
+E ++L D+S TY + K N +++A+++ + +
Sbjct: 359 FGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 418
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
D +N LI N + L++ KT Y ++++L G EEA +
Sbjct: 419 PDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSL 478
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
LKE E SG S + N +I G+C N ++ AE I +++ +G + ++ + G
Sbjct: 479 LKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCK 538
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
+ E Q M L +G KPD S+L+ G ++ V + +
Sbjct: 539 NRRVEEAAQLMDQMLM-----EGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTS 589
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 122/293 (41%), Gaps = 6/293 (2%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
L+D TY L++ ++ Q ++A R + GI T+N ++ T +
Sbjct: 379 LRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHR 438
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
++ EMK K PD F+Y + I+S +R LE +L+EMES + TY +
Sbjct: 439 LAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESS-GCSRNVVTYNTL 497
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
+ K I++A ++ + E + ++ + YN LI E +L D
Sbjct: 498 IDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGL 557
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ Y ++L + G+ ++A +++ +G D+ +I+G G V+ A
Sbjct: 558 KPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASR 617
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
+L + KG P ++ V F +T + + + KG PD
Sbjct: 618 LLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMME-----KGDPPD 665
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/371 (19%), Positives = 140/371 (37%), Gaps = 27/371 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LLN V + +M GI T+N ++ + Q ++ EM
Sbjct: 178 TYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEM 237
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD ++ + + ++ G + +RE T H Y K
Sbjct: 238 GSYGLSPDEKTFTTLMQGFIEEGNMNG-ALRIREQMVAAGCPSSNVTVNVLVHGYCKEGR 296
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
I++ + + + D +N L++ +G+ L + D+ + + D
Sbjct: 297 IEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDV---MLQEGFDPDIFT 353
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ L KLGE EEA ++L + L S +T N +I C V+ A + L
Sbjct: 354 YNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLT 413
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCM----KAALSVYVE--GKGWKPDPKVITSI 423
KG ++ + G C+ + A+ ++ E KG PD +
Sbjct: 414 SKGILPDVCTFNSLIQGL-----------CLTNNHRLAMELFEEMKTKGCHPDEFTYNML 462
Query: 424 LSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGI 480
+ L G +++ + + + + N Y+ I +N + +E+ D M+ GI
Sbjct: 463 IDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGI 522
Query: 481 DEDEETKEILV 491
+ T L+
Sbjct: 523 SRNVVTYNTLI 533
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/278 (16%), Positives = 106/278 (38%), Gaps = 5/278 (1%)
Query: 158 KEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL 217
K+ S++ Y +++ K G + + VL EMK ++ I I SY
Sbjct: 97 KQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELF 156
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
+ ++ ME + + LD TY + + N + V + R + D +N
Sbjct: 157 DEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNI 216
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
LI + + + + + + T+++ ++ G A ++ ++ +G
Sbjct: 217 LIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAG 276
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
N ++ GYC G ++ + ++++ +G ++ + G G +
Sbjct: 277 CPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHAL 336
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
+ + L +G+ PD S++ L G V++
Sbjct: 337 EILDVMLQ-----EGFDPDIFTYNSLIFGLCKLGEVEE 369
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM-CLYSKTGQYEKVPDVLT 190
QTY ++ R+++T +A+ FR+M E G +TY + L S G + D L
Sbjct: 632 QTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLV 691
Query: 191 EMKAKNIFPDNFSY 204
EM K PD S+
Sbjct: 692 EMTDKGFLPDFSSF 705
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 172/403 (42%), Gaps = 19/403 (4%)
Query: 12 QIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIE--PELDNWVKNGNKVRVGELQRII 69
Q H+ V + ++ N+++ TL + + +G ++ +D + N V II
Sbjct: 163 QFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNT---II 219
Query: 70 RDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAV--QLDLIGRVHGFLSAESYFSNL--K 125
+ K K ++A ++ M KGI +A+ ++G++ A F+ + +
Sbjct: 220 DSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMK---DATDLFNKMIFE 276
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+ T+ L++ + ++R+ +A + M + GI TYN +M Y + K
Sbjct: 277 NINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKA 336
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
+ + + + P+ SY I I+ + ++ + +EM +I+ D TY S
Sbjct: 337 KHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCN-NIIPDVVTYNSLID 395
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
K I A ++ + +R D I YN S+ +L +V + L
Sbjct: 396 GLCKLGKISYALKLVDEMHDRGVPHDKITYN---SILDALCKNHQVDKAIALLTKMKDEG 452
Query: 306 INRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
I D Y T+++ L K G E+A V ++ + G D I A+I G+C++GL +
Sbjct: 453 IQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESL 512
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
+L + E G ++ ++ FD + ++ + ++ ++
Sbjct: 513 DLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMIT 555
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/461 (19%), Positives = 183/461 (39%), Gaps = 69/461 (14%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSD-------WMNR-------KGICV 95
L +K G + V L +I+ L + + QAL+ D +N+ G+C
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189
Query: 96 FAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFR 155
A+QL + RV G L + Y +++ + + ++A +
Sbjct: 190 VGQTSAALQL--LRRVDGKLV-----------QPNVVMYNTIIDSMCKVKLVNEAFDLYS 236
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARS 215
+M GI+ +TYN ++ + G+ + D+ +M +NI P+ +++ I ++ +
Sbjct: 237 EMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKER 296
Query: 216 DLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
L+ + +L M Q I D TY S Y ++KA + +R + Y
Sbjct: 297 RLKEAKNVLAMMMKQG-IKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSY 355
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYINR--DYITMLEALMKLGEHEEAEKVLKEW 333
+ +I + + E + L+ ++ C I Y ++++ L KLG+ A K++ E
Sbjct: 356 SIMIHGFCKIKKVDEAMNLF--KEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 413
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
G +D N+++ C N V A A+L + ++G ++ + G G+
Sbjct: 414 HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRL 473
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQM 453
E D +++ L +G + DV + A ++
Sbjct: 474 E---------------------DARIV---FEDLLVKGYILDVNIYTAMIQGFCS----- 504
Query: 454 YHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCTM 494
H ++ +LL M+ +G + T EI++C++
Sbjct: 505 -HGLFDESL-------DLLSKMEENGCIPNAVTYEIIICSL 537
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 157/402 (39%), Gaps = 32/402 (7%)
Query: 109 GRVHGFLSAESYFSNLKDDEKTYQTYGA---------LLNCYVRQRQTDKALSHFRKMKE 159
G++ G L +++S + + + G L+NC+ + Q + S K+ +
Sbjct: 76 GKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILK 135
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
MG + +T ++ GQ + ++ A + SY IN
Sbjct: 136 MGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSA 195
Query: 220 MEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
+LR ++ QP++V+ Y + K L+++A D+ + + D + YN
Sbjct: 196 ALQLLRRVDGKLVQPNVVM----YNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYN 251
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEW 333
LIS + +G + DL IN + T +++ K +EA+ VL
Sbjct: 252 ALISGFCIVGKMKDA---TDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
G D N+++ YC V A+ I + ++G +S++++ G+ K
Sbjct: 309 MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV 368
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQ 452
+ K + PD S++ L G + V + +P ++
Sbjct: 369 DEAMNLFKE-----MHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKI 423
Query: 453 MYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETKEILV 491
Y++ + A +N + VD+ LL MK +GI D T LV
Sbjct: 424 TYNSILDALCKNHQ-VDKAIALLTKMKDEGIQPDICTYTTLV 464
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 149/367 (40%), Gaps = 61/367 (16%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y + ++AL +MKE + + +TYN ++ +G+ + +VL EM
Sbjct: 229 TYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEM 288
Query: 193 KAKNIFPDNF-SYRICINSYGARSD--LEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ P F S+ +S GA D +G E I +D TY + +
Sbjct: 289 EGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKE-----------IRIDERTYCILLNGLCR 337
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN-KSEVLRLWDLEKTACKRYINR 308
I+KA +VL K E I YN L++ Y G+ K +L +E +R +
Sbjct: 338 VGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQME----ERGLEP 393
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
+ IT N VI +C G V +AE + +
Sbjct: 394 NRITF--------------------------------NTVISKFCETGEVDHAETWVRRM 421
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
VEKG + T ++ + GY G R F+ + ++ G KP+ S+++ L
Sbjct: 422 VEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDE-----MDKAGIKPNVISYGSLINCLC 476
Query: 429 DEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDE 484
+ + D E +A + R V P N ++Y+ I+A+ K D D M GID
Sbjct: 477 KDRKLIDAEIVLADMIGRGVSP-NAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATL 535
Query: 485 ETKEILV 491
T L+
Sbjct: 536 VTYNTLI 542
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 164/401 (40%), Gaps = 22/401 (5%)
Query: 101 HAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMK 158
+ + L+ + RV AE + L ++ T +Y L+N Y ++ KA+ +M+
Sbjct: 328 YCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQME 387
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
E G+ + +T+N ++ + +TG+ + + M K + P +Y IN YG +
Sbjct: 388 ERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFV 447
Query: 219 GMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
L EM+ +P+++ +Y S + K + A VL R + Y
Sbjct: 448 RCFEFLDEMDKAGIKPNVI----SYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIY 503
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
N LI SL + R +D + Y T++ L + G ++AE + +
Sbjct: 504 NMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAG 563
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG--KT 393
G + D N++I GY + Q + + + G T ++ + G
Sbjct: 564 KGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTM 623
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQ 452
++ FQ M V PD V ++ ++G+V + + + ++
Sbjct: 624 DKMFQEMLQMDLV--------PDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKV 675
Query: 453 MYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETKEILV 491
Y++ I A +R+ + + L+D MKA G+ +T IL+
Sbjct: 676 TYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILI 716
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 142/372 (38%), Gaps = 47/372 (12%)
Query: 145 RQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSY 204
+ D+A + M++ G ST + N ++ + +EK V ++ PD +Y
Sbjct: 101 KMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAY 160
Query: 205 RICINSYGARSDLE-GMEIILREMESQPHIVLDWSTYASAAHF--YIKANLIDKASDVLK 261
+ + DL+ G E+ M+S + S +A K I A +
Sbjct: 161 GKAVQAAVMLKDLDKGFEL----MKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFD 216
Query: 262 KAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLG 321
+ +R + + YN LI Y +G E L + K Y ++L L G
Sbjct: 217 EMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSG 276
Query: 322 EHEEAEKVLKEWELSGN----------------------------SYDTRIPNAVIIGYC 353
++A +VL E E SG D R ++ G C
Sbjct: 277 RVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLC 336
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSV-YVEGKG 412
G ++ AE +L LVE G + S+ ++ Y G + KA L+ +E +G
Sbjct: 337 RVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVK------KAILTTEQMEERG 390
Query: 413 WKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVD- 469
+P+ +++SK + G V E +V + + V P + Y++ I + G V
Sbjct: 391 LEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSP-TVETYNSLINGYGQKGHFVRC 449
Query: 470 -ELLDSMKADGI 480
E LD M GI
Sbjct: 450 FEFLDEMDKAGI 461
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 151/371 (40%), Gaps = 26/371 (7%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY LLN R + +KA K+ E G+ S ++YN ++ Y + G +K +
Sbjct: 326 RTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQ 385
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ + + P+ ++ I+ + +++ E +R M + + TY S + Y +
Sbjct: 386 MEERGLEPNRITFNTVISKFCETGEVDHAETWVRRM-VEKGVSPTVETYNSLINGYGQKG 444
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-- 309
+ + L + ++ + + I Y LI+ + +L D E I R
Sbjct: 445 HFVRCFEFLDEMDKAGIKPNVISYGSLINCLC------KDRKLIDAE-IVLADMIGRGVS 497
Query: 310 -----YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y ++EA L + ++A + E SG N +I G NG V+ AE +
Sbjct: 498 PNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDL 557
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITS 422
+ KG ++ + +GY + T++ L +Y + K G KP
Sbjct: 558 FLQMAGKGCNPDVITYNSLISGYAKSVNTQK-------CLELYDKMKILGIKPTVGTFHP 610
Query: 423 ILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGI 480
++ EG V + F L+ + ++ +Y+ I + +G + L M G+
Sbjct: 611 LIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGV 670
Query: 481 DEDEETKEILV 491
D D+ T L+
Sbjct: 671 DCDKVTYNSLI 681
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 16/207 (7%)
Query: 30 TTLYSIISPLGNPGTRIEPELDNWVK---NGNKVRVGELQRIIRDLRKRKRFSQALEVSD 86
T ++I+ LG G R++ D +++ G V +I K + LE+ D
Sbjct: 536 VTYNTLINGLGRNG-RVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYD 594
Query: 87 WMNRKGI----CVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--KDDEKTYQTYGALLNC 140
M GI F P +A R G ++ + F + D Y ++
Sbjct: 595 KMKILGIKPTVGTFHPLIYAC------RKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYS 648
Query: 141 YVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD 200
Y KA+S ++M + G+ +TYN ++ Y + + ++ ++ +MKAK + P
Sbjct: 649 YAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPK 708
Query: 201 NFSYRICINSYGARSDLEGMEIILREM 227
+Y I I D G REM
Sbjct: 709 VDTYNILIKGLCDLKDFNGAYFWYREM 735
>gi|413953500|gb|AFW86149.1| hypothetical protein ZEAMMB73_846563 [Zea mays]
Length = 1039
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 21/247 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ R + ++AL F +MK GIA S T ++ L+ K Y K + ++M
Sbjct: 315 TYSLLISASSRHGKGEQALRLFEEMKGQGIAPSNYTCASLLALHCKNEDYPKALALFSDM 374
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ + PD Y I I YG E E+E + ++ D TY + A ++ A
Sbjct: 375 ESSKVIPDEVIYGILIRIYGKLGLYEEARQTFGEIE-KAGLLNDEQTYVAMAQVHLNAGD 433
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR-------Y 305
D+A +VL+ + R + Y+ L+ + + K +V+ D + + +
Sbjct: 434 CDRALEVLESMKTRGVKPSRFSYSALLRCHVA---KEDVVAAEDTFRALSQSQHGLPDAF 490
Query: 306 INRDYITMLEALMKLGEHEEAEK----VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
D ML M+LG ++A +L+E G D + V+ YC +G+V++A
Sbjct: 491 CCND---MLRLYMRLGRLDKARALVSVLLRE---DGFQLDENLSTTVMEFYCKSGMVEDA 544
Query: 362 EAILEDL 368
E +LED+
Sbjct: 545 EKLLEDI 551
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 108/257 (42%), Gaps = 37/257 (14%)
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
++ QT+ +++ Y + + DKA+ F +E+G+ + Y +++ LY K G++++ +
Sbjct: 779 QSMQTFNTMISVYGKGGKLDKAVEMFAAAQELGLPIDEKMYTNMLSLYGKAGRHQEASLM 838
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
MK I P S+ IN+Y + + +EM+ H D +Y + Y
Sbjct: 839 FKRMKEDGIRPGKISFNSMINAYATSGLFSEAKSVFQEMQDCGH-APDSFSYLALIRAYT 897
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
+A L +A + ++ ++ S N + +C + +
Sbjct: 898 EAKLYTEAEEAIR------------------TMTLSSSNTT----------PSCPHFSH- 928
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
++ A +K G EA ++ + G + D A++ Y + GLV + ++ E
Sbjct: 929 ----LILAFLKEGRVGEARRIYGQMMEVGVAPDLACCRAMMRVYVDRGLVDDGISLYETT 984
Query: 369 VEKGKATTPNSWAVVAA 385
K P+S+ + AA
Sbjct: 985 CGSLK---PDSFVLSAA 998
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 134/320 (41%), Gaps = 19/320 (5%)
Query: 113 GFLSAESYFSNLKDD---EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
G+ A +F+ +K E + Y LL Y R + A F +M ++G +
Sbjct: 152 GWRQARDFFAWMKLQLCYEPSVVAYTVLLRLYGRVGKVKLAEETFLEMLQVGCEPDAVAC 211
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
++C Y++ G++E + + ++ + + P Y I+S + L G I + +
Sbjct: 212 GTLLCAYARWGRHEDMMLFYSAVRGRGLVPPISVYNYMISSL-QKQKLHGKVIHVWKQML 270
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + TY +K +L+++A D+ + R + Y+ LIS + G
Sbjct: 271 EAGAPPNQFTYTVVIGSLVKEDLLEEAVDLFGEMRRRRFVPEEATYSLLISASSRHGKGE 330
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+ LRL++ K N ++L K ++ +A + + E S IP+ VI
Sbjct: 331 QALRLFEEMKGQGIAPSNYTCASLLALHCKNEDYPKALALFSDMESS-----KVIPDEVI 385
Query: 350 IG-----YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
G Y GL + A ++ + G ++ +A + +AG +R + +++
Sbjct: 386 YGILIRIYGKLGLYEEARQTFGEIEKAGLLNDEQTYVAMAQVHLNAGDCDRALEVLES-- 443
Query: 405 SVYVEGKGWKPDPKVITSIL 424
++ +G KP +++L
Sbjct: 444 ---MKTRGVKPSRFSYSALL 460
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/395 (17%), Positives = 154/395 (38%), Gaps = 43/395 (10%)
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
+ L +DE QTY A+ ++ D+AL MK G+ S +Y+ ++ +
Sbjct: 412 AGLLNDE---QTYVAMAQVHLNAGDCDRALEVLESMKTRGVKPSRFSYSALLRCHVAKED 468
Query: 182 YEKVPDVLTEM-KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
D + ++++ PD F + Y L+ ++ + + LD +
Sbjct: 469 VVAAEDTFRALSQSQHGLPDAFCCNDMLRLYMRLGRLDKARALVSVLLREDGFQLDENLS 528
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
+ FY K+ +++ A +L+ + + L+ +YA N+ V+ LE+
Sbjct: 529 TTVMEFYCKSGMVEDAEKLLEDIQRNRKPVKVPTLLLLVEMYAR--NRPSVV----LEER 582
Query: 301 ACKRYINRDYIT------------------MLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
+ R + + ++ L + G +EA + + G D
Sbjct: 583 SSSRALGSSAASVALNSLLDMPGGLSSVSLLISRLAREGSTDEARFIYDQLTELGTKPDD 642
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA---GYFDAGKTERGFQC 399
+I+ Y ++ A ++L + A+ P+ V A + G+ E +
Sbjct: 643 SAVATLIVQYGQAKQLERA----QELFDSASASFPDGALVCNAMVDAFCKCGRAEDAYH- 697
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV-AALRTVIPMNRQMYHAFI 458
L + + +G + + +++ L G Q+VE + R + ++ +Y+ FI
Sbjct: 698 ----LFMEMADQGSYRNAVTASILVTHLTKHGKFQEVENIMHGCFRDEVQLDTALYNTFI 753
Query: 459 KANIRNGK--GVDELLDSMKADGIDEDEETKEILV 491
K+ + +GK + D M + G+ + +T ++
Sbjct: 754 KSMLESGKLHSAVSIYDRMVSSGVSQSMQTFNTMI 788
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 118/302 (39%), Gaps = 8/302 (2%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
A+++ + + + + A F +M + G + +T + ++ +K G++++V +++
Sbjct: 681 AMVDAFCKCGRAEDAYHLFMEMADQGSYRNAVTASILVTHLTKHGKFQEVENIMHGCFRD 740
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
+ D Y I S L I M S + T+ + Y K +DK
Sbjct: 741 EVQLDTALYNTFIKSMLESGKLHSAVSIYDRMVSS-GVSQSMQTFNTMISVYGKGGKLDK 799
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLE 315
A ++ A+E D Y ++SLY G E ++ K R + +M+
Sbjct: 800 AVEMFAAAQELGLPIDEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMIN 859
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKAT 375
A G EA+ V +E + G++ D+ A+I Y L AE + + T
Sbjct: 860 AYATSGLFSEAKSVFQEMQDCGHAPDSFSYLALIRAYTEAKLYTEAEEAIRTMTLSSSNT 919
Query: 376 TPNS--WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
TP+ ++ + + G+ + + V G PD +++ D G V
Sbjct: 920 TPSCPHFSHLILAFLKEGRVGEARRIYGQMMEV-----GVAPDLACCRAMMRVYVDRGLV 974
Query: 434 QD 435
D
Sbjct: 975 DD 976
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 132/340 (38%), Gaps = 52/340 (15%)
Query: 112 HG-FLSAESYFSNLKDDEKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLT 168
HG F E+ DE T Y + + + A+S + +M G++ S T
Sbjct: 724 HGKFQEVENIMHGCFRDEVQLDTALYNTFIKSMLESGKLHSAVSIYDRMVSSGVSQSMQT 783
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
+N ++ +Y K G+ +K + + A +L G+ I
Sbjct: 784 FNTMISVYGKGGKLDKA----------------------VEMFAAAQEL-GLPI------ 814
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
D Y + Y KA +AS + K+ +E + I +N +I+ YA+ G
Sbjct: 815 -------DEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINAYATSGLF 867
Query: 289 SEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN-- 346
SE ++ + + Y+ ++ A + + EAE+ ++ LS ++ P+
Sbjct: 868 SEAKSVFQEMQDCGHAPDSFSYLALIRAYTEAKLYTEAEEAIRTMTLSSSNTTPSCPHFS 927
Query: 347 AVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSV 406
+I+ + G V A I ++E G A + Y D G + G +S+
Sbjct: 928 HLILAFLKEGRVGEARRIYGQMMEVGVAPDLACCRAMMRVYVDRGLVDDG-------ISL 980
Query: 407 YVEGKG-WKPDPKVITS---ILSKLGDEGSVQDVEAFVAA 442
Y G KPD V+++ + + G E Q V ++A
Sbjct: 981 YETTCGSLKPDSFVLSAAFHLYERAGRECEAQGVLESISA 1020
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 167/373 (44%), Gaps = 18/373 (4%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+ T T+ +++ + + Q +AL+ F KM+E +A + TYN ++ K K +
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 188 VLTEMK-AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
VL EM+ K++ PD +Y IN + + +++ ILREM ++ I D TY S
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKR 304
+ +D+A +++++ + + + D ++ LI+ + + E L+L+ L ++ K
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+ Y +++ K G E+A K+L E + ++++ G C G + A +
Sbjct: 183 DVV-TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+ KG ++ + G A K + M + PD ++L
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDE-----MTATCCPPDTVSYNALL 296
Query: 425 SKLGDEGSVQDVEAFV--AALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMK-AD 478
G +++ + A ++ +P +R Y ++ N ++E LL++MK A
Sbjct: 297 DGYCRLGRIEEAKQLFKEMATKSCLP-DRITYTCLVR-GFCNASRLEEARFLLENMKTAA 354
Query: 479 GIDEDEETKEILV 491
GID D T I+V
Sbjct: 355 GIDPDVVTYSIVV 367
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 158/379 (41%), Gaps = 44/379 (11%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+D + K+GN + + +++ + RK + S ++ G+C D A LDL
Sbjct: 191 IDGFCKSGN---LEKAMKMLGVMEGRKCVPNVVTYSSLLH--GLCKAGDLDQA--LDLFR 243
Query: 110 R----------------VHGFLSAESY-FSNLKDDEKTYQ-------TYGALLNCYVRQR 145
R +HG +A + L DE T +Y ALL+ Y R
Sbjct: 244 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLG 303
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK-AKNIFPDNFSY 204
+ ++A F++M +TY ++ + + E+ +L MK A I PD +Y
Sbjct: 304 RIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTY 363
Query: 205 RICINSYG-ARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK- 262
I + Y A+ +E E I +EM ++ ++ + TY+S KA +D A +VLK
Sbjct: 364 SIVVAGYSRAKRFVEAAEFI-QEMIAR-NVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNM 421
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGE 322
+R+E G +N +I LG+ E +L Y T+LE + G
Sbjct: 422 VNKRVEPSVGT-FNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 480
Query: 323 HE---EAEKVLKEWELSGNSYDTRIP----NAVIIGYCNNGLVQNAEAILEDLVEKGKAT 375
E E +V+++ +S +P +A+I G C + A A++E+L +
Sbjct: 481 MEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEP 540
Query: 376 TPNSWAVVAAGYFDAGKTE 394
+ G AG+TE
Sbjct: 541 AEEDCLAIVDGLLRAGRTE 559
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 146/376 (38%), Gaps = 60/376 (15%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG-IALSTLTYNDIMCLYSKTGQYEKVP 186
+ T TYG +++ ++ T AL+ RKM+E+ I + + Y+ I+ K G++
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
++ TEM+ K IFPD F+Y I + + WS
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGR--------------------WS-------- 307
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKR 304
A +L++ ER D + YN LI+ + G E L+D L +
Sbjct: 308 --------DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
I Y +M++ K + AE + G S + N +I GYC + + +
Sbjct: 360 TIT--YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
L ++ E G ++ + G++ G ++ +S G PD ++L
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS-----SGLCPDIVTCDTLL 472
Query: 425 SKLGDEGSVQD-VEAFVAA------LRTVIPMNR-----QMYHAFIKANIRNGKGV--DE 470
L D G ++D +E F L P N Q Y+ I I GK + +E
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532
Query: 471 LLDSMKADGIDEDEET 486
L + M GI D T
Sbjct: 533 LYEEMPHRGIVPDTIT 548
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 130/279 (46%), Gaps = 16/279 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+N +V++ + +A + +M GI +T+TY+ ++ + K + + + M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 193 KAKNIFPDNFSYRICINSY-GARSDLEGMEIILREMESQPHIVLDWSTYASAAH-FYIKA 250
K P+ ++ I+ Y GA+ +GME +L EM ++ +V D +TY + H FY+
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGME-LLHEM-TETGLVADTTTYNTLIHGFYLVG 444
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW--------DLEKTAC 302
+L + A D+L++ D + + L+ G + L ++ DL+ +
Sbjct: 445 DL-NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 303 KRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
+ D Y ++ L+ G+ EAE++ +E G DT +++I G C +
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
A + + + K + ++ + GY AG+ + G +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 56 NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFL 115
NG + V +I L +F +A E+ + M +GI V ++ +D + +
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI-VPDTITYSSMIDGLCKQSRLD 563
Query: 116 SAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A F ++ K T+ L+N Y + + D L F +M GI + +TY ++
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
C + K G D+ EM + ++PD + R
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 111/263 (42%), Gaps = 41/263 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
++ L+ C+ + ALS F K+ ++G+ +T+N ++ V D ++E
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLL-------HGLCVEDRVSE- 167
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
A N+F F E +P++V T+ + + +
Sbjct: 168 -ALNLFHQMF-----------------------ETTCRPNVV----TFTTLMNGLCREGR 199
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
I +A +L + E Q I Y ++ G+ L L L K +I +
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL--LRKMEEVSHIIPNVVI 257
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++++L K G H +A+ + E + G D N++I+G+C++G +AE +L++++
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 370 EKGKATTPNSWAVVAAGYFDAGK 392
E+ + ++ + + GK
Sbjct: 318 ERKISPDVVTYNALINAFVKEGK 340
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 13/246 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY + + + Q +KAL KMKE+ + ++TYN + SK G++++ +L EM
Sbjct: 497 TYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREM 556
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
+ + PD SY I++YG E +LR+M ++ P+++ TY S +
Sbjct: 557 PGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVI----TYNSVIKACGR 612
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+KA D+LK+ +E D + YN IS G E L DL + + D
Sbjct: 613 GGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEAL---DLLREMPAEGLTPD 669
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSG--NSYDTRIPNAVIIGYCN-NGLVQNAEAILE 366
I+ A+ E EK L L G T ++ I C G + A ++
Sbjct: 670 VISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVR 729
Query: 367 DLVEKG 372
++ ++G
Sbjct: 730 EMAQRG 735
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 6/261 (2%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
A+ C R R + L R+M G+ + +TYN + K GQ+EK D+L +MK
Sbjct: 466 AIRACGERGRWQE-GLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKEL 524
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
+ PD+ +Y I + R + +LREM Q + D +Y +A Y K ++
Sbjct: 525 AMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQ-GLTPDVISYTAAIDAYGKNGQWER 583
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITML 314
A ++L++ + + I YN +I G + L L +L++TA + Y +
Sbjct: 584 AVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDL-MSYNLAI 642
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN-NGLVQNAEAILEDLVEKGK 373
A K G EEA +L+E G + D I I CN G + A +L + G
Sbjct: 643 SACGKRGRWEEALDLLREMPAEGLTPDV-ISYTSAIRACNAEGEWEKALGLLNLMGAHGV 701
Query: 374 ATTPNSWAVVAAGYFDAGKTE 394
+ T S+++ G+ E
Sbjct: 702 SPTATSYSLAIEACGKGGRRE 722
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 150/359 (41%), Gaps = 19/359 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y + + R Q ++ + R+M +G+ +TYN ++ K GQ+++ VLTEM
Sbjct: 217 SYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEM 276
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
AK + P+ SY + I + G + +LR+MESQ + D +Y +A
Sbjct: 277 SAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQ-GVTPDVISYDAAIKACGGGGQ 335
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-RDYI 311
+ + D+L + R + I +N I G + + L E TA + +
Sbjct: 336 WETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLR-EVTALGLTPDATSFN 394
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+ + A K G +EA ++LKE D N+ I G + A + + K
Sbjct: 395 SAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTK 454
Query: 372 GKATTPN----SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
G TPN + A+ A G + G+ + G + ++ + +G P+ S +
Sbjct: 455 G--LTPNVISSNIAIRACG--ERGRWQEGLELLR-----QMPAQGLTPNVITYNSAIKTC 505
Query: 428 GDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
G G + +A ++ + + + Y++ I A + G K LL M G+ D
Sbjct: 506 GKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPD 564
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 130/316 (41%), Gaps = 16/316 (5%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA--VQLDLIGRVHGFLSAESYF 121
+LQ +R+ ++ +AL + D M G+ C H+ + GR + A
Sbjct: 112 KLQAALREAATTGKWREALGILDEMKEGGVV----CAHSYTTAITTCGRQGQWEKALELL 167
Query: 122 SNLKDDEKTYQ---TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
+ + E Y + + Q + A+S R+M + + ++YN + +
Sbjct: 168 REIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGR 227
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
GQ+E+V +L EM + + PD +Y I G + +L EM ++ + +
Sbjct: 228 GGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAK-GLTPETI 286
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
+Y A ++ +A +VL++ E + D I Y+ I G + DL
Sbjct: 287 SYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSV---DLL 343
Query: 299 KTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
R + + I + + A K G+ E+A ++L+E G + D N+ I +
Sbjct: 344 DEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKS 403
Query: 356 GLVQNAEAILEDLVEK 371
G + A +L+++ K
Sbjct: 404 GRWKEALELLKEMPAK 419
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 104/260 (40%), Gaps = 49/260 (18%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
L D ++ + A+ C R + AL ++M + ++YN + K GQ+
Sbjct: 385 GLTPDATSFNS--AIAACTKSGRWKE-ALELLKEMPAKRLKPDAISYNSAIEACGKGGQW 441
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQ---PHIVLDWS 238
E ++ +M K + P+ S I I + G R EG+E+ LR+M +Q P+++
Sbjct: 442 EMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLEL-LRQMPAQGLTPNVI---- 496
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
TY SA K +KA D+L K +E D I YN I+
Sbjct: 497 TYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIA------------------ 538
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
AC K G +EA +L+E G + D A I Y NG
Sbjct: 539 --ACS---------------KRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQW 581
Query: 359 QNAEAILEDLVEKGKATTPN 378
+ A +L + KG TPN
Sbjct: 582 ERAVELLRQMPTKG--LTPN 599
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 1/280 (0%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
+D TY L++ ++ Q ++A R + GI T+N ++ T +
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
++ EM++K PD F+Y + I+S ++ L+ +L++ME TY +
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVITYNTLI 477
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
+ KAN I +A ++ + E ++ + YN LI + +L D ++
Sbjct: 478 DGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQK 537
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y ++L + G+ ++A +++ +G D +I G C G V+ A +
Sbjct: 538 PDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
L + KG A TP+++ V G F KT + L
Sbjct: 598 LRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 152/365 (41%), Gaps = 9/365 (2%)
Query: 109 GRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLT 168
GRV L+ SN T+ L+N + A+ M + G T
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
YN ++ K G+ ++ + L +M ++ P+ +Y I++ + +E + R +
Sbjct: 333 YNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
S+ I+ D T+ S A ++ ++ + + D YN LI S G
Sbjct: 393 SK-GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 289 SEVLR-LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
E L L +E + C R + Y T+++ K + EAE++ E E+ G S ++ N
Sbjct: 452 DEALNMLKQMELSGCARSV-ITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
+I G C + V++A +++ ++ +G+ ++ + + G ++ ++A S
Sbjct: 511 LIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTS-- 568
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK 466
G +PD +++S L G V+ + +++ I + Y+ I+ R K
Sbjct: 569 ---NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRK 625
Query: 467 GVDEL 471
+ +
Sbjct: 626 TTEAI 630
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 137/356 (38%), Gaps = 42/356 (11%)
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARS 215
KM GI T+N ++ + Q +L +M + + PD ++ + Y
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEG 238
Query: 216 DLEGMEIILREMESQPHIVLDWSTYA--SAAHFYIKANLIDKASDVLKKAEERLEQKDGI 273
DL+G LR E WS + H + K ++ A + +++ + +DG
Sbjct: 239 DLDGA---LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE----MSNQDGF 291
Query: 274 -----GYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
+N L++ G+ + + D+ Y +++ L KLGE +EA +
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
L + S +T N +I C V+ A + L KG ++ + G
Sbjct: 352 FLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL- 410
Query: 389 DAGKTERGFQCM----KAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAA 442
C+ + A+ ++ E KG +PD ++ L +G + + +
Sbjct: 411 ----------CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 443 L------RTVIPMNRQMYHAFIKAN-IRNGKGVDELLDSMKADGIDEDEETKEILV 491
+ R+VI N + F KAN IR +E+ D M+ G+ + T L+
Sbjct: 461 MELSGCARSVITYN-TLIDGFCKANKIREA---EEIFDEMEVHGVSRNSVTYNTLI 512
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 125/286 (43%), Gaps = 22/286 (7%)
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
Y +I+ ++G ++ + +L +MK + I I SY A+ +L+ E+
Sbjct: 86 YEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESY-AQFELQD------EIL 138
Query: 229 SQPHIVLDWSTYASAAHFYIKA-NLIDKASD--VLKKAEERLE----QKDGIGYNFLI-S 280
H ++D HFY + NL+ ++ +++ A ++ + D +N LI +
Sbjct: 139 GVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKA 198
Query: 281 LYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
L + + +L L D+ + + T+++ ++ G+ + A ++ ++ G S+
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPD-EKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSW 257
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAILEDLV-EKGKATTPNSWAVVAAGYFDAGKTERGFQC 399
N ++ G+C G V++A ++++ + G ++ + G AG + +
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
M L +G+ PD S++S L G V++ F+ + T
Sbjct: 318 MDVMLQ-----EGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMIT 358
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 147/349 (42%), Gaps = 36/349 (10%)
Query: 50 LDNWVKNGNKVRVGELQR------------IIRDLRKRKRFSQALEVSDWMNRKGICVFA 97
L + G VR EL R +I R R ALEV M +G
Sbjct: 123 LRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPD 182
Query: 98 PCDHAVQLD---LIGRVHGFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALS 152
+A + IGR+ +A+ + L E + Y AL+ Y + + D AL
Sbjct: 183 KYTYATLISGWCKIGRMED--AAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQ 240
Query: 153 HFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG 212
+ M + G+A++ TYN ++ G+ VL EM+ + PD F+Y I IN Y
Sbjct: 241 YREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYC 300
Query: 213 ARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG 272
+ + + EM S+ + TY S + + + + + + K A ++ + D
Sbjct: 301 KEGNEKKALEVFEEM-SRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDV 359
Query: 273 IGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRD--YITMLEALMKLGEHEEAEKV 329
+ YN LI+ + + G+ + ++EK KR D Y T++ LG +EA +
Sbjct: 360 VMYNALINSHCAGGDMERAFEIMAEMEK---KRIPPDDVTYNTLIRGFCLLGRLDEARGL 416
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
+ E G D +G C NG +AE +++++V GK TP+
Sbjct: 417 IDEMTKRGIQPD--------LGLCKNGQGDDAENLMKEMV--GKGITPD 455
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 148/343 (43%), Gaps = 23/343 (6%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A + F + + + L T T+N ++ TG+ + ++L +M P+ +Y I
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIA 155
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
+ AR ++ ++REM + I D TYA+ + K I + D K +E L Q
Sbjct: 156 GFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCK---IGRMEDAAKVFDEMLTQ 212
Query: 270 KD----GIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHE 324
+ + YN LI Y G L+ D+ + + Y ++ AL G
Sbjct: 213 GEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVA-TYNLLVHALFMDGRAS 271
Query: 325 EAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
+A VL+E + +G S D N +I GYC G + A + E++ KG T ++ +
Sbjct: 272 DAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLI 331
Query: 385 AGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL- 443
+ G+ + + K A+ KG +PD + ++++ G ++ +A +
Sbjct: 332 YAFSRKGQVQETDRLFKVAVK-----KGIRPDVVMYNALINSHCAGGDMERAFEIMAEME 386
Query: 444 RTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDED 483
+ IP + Y+ I+ G+ +DE L+D M GI D
Sbjct: 387 KKRIPPDDVTYNTLIRGFCLLGR-LDEARGLIDEMTKRGIQPD 428
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N Y ++ KAL F +M G+ + +TY ++ +S+ GQ ++ +
Sbjct: 291 TYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVA 350
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K I PD Y INS+ A D+E I+ EME + I D TY + +
Sbjct: 351 VKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKK-RIPPDDVTYNTLIRGFCLLGR 409
Query: 253 IDKASDVLKKAEERLEQKD-GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-- 309
+D+A ++ + +R Q D G+ N G+ +E +L K + I D
Sbjct: 410 LDEARGLIDEMTKRGIQPDLGLCKN-------GQGDDAE-----NLMKEMVGKGITPDDS 457
Query: 310 -YITMLEALMKLGEHEEAEKVLK 331
YI+++E L + E A K
Sbjct: 458 TYISLIEGLTTVDEQMSAADAAK 480
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 145/365 (39%), Gaps = 54/365 (14%)
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
R H L AES S+ + + TY T ++ Y +T +AL+ MK+ + + Y
Sbjct: 1679 RAHQMLIAESKPSSFQANAFTYST---IVRGYCEDGETRQALALLEHMKKAEVPANAKLY 1735
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N I+ K G+ ++ D+L M + PD ++Y I IN+
Sbjct: 1736 NIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILINAL------------------ 1777
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK- 288
K ++ A +++ + R D + YN LI GN
Sbjct: 1778 ------------------CKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGR 1819
Query: 289 ---SEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
RL++ + Y +++AL+++ E+A+KVL +G ++D
Sbjct: 1820 FRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTY 1879
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG---FQCMKA 402
N +I + G++ A + ++ +G ++ + G+ AGK E F MKA
Sbjct: 1880 NMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKA 1939
Query: 403 ALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANI 462
+G P+ + TSI G +QD A++ +R ++ Y A I
Sbjct: 1940 --------RGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLVDAISYVALISTIC 1991
Query: 463 RNGKG 467
+ GKG
Sbjct: 1992 KLGKG 1996
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K T TY +++ +R + ++A M E G A +TYN ++ ++K G +K
Sbjct: 1835 KGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDK 1894
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
D+ EM + PD +Y ++ + +E + EM+++ I + TY S
Sbjct: 1895 AMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKAR-GIFPNGRTYTSIT 1953
Query: 245 HFYIKANLIDKASDVLKKAEERLEQ-KDGIGYNFLISLYASLGNKSEVLRLWD--LEKTA 301
+KA + A L E R E D I Y LIS LG +L LEK
Sbjct: 1954 DACLKAGRMQDAHAYL--VEMRKEGLVDAISYVALISTICKLGKGKLGFQLLREMLEKGF 2011
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
+ + + EAL K ++A+ +++E
Sbjct: 2012 KPNLVT--FNVVFEALSKESNTDDAKIMIQE 2040
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 146/376 (38%), Gaps = 60/376 (15%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG-IALSTLTYNDIMCLYSKTGQYEKVP 186
+ T TYG +++ ++ T AL+ RKM+E+ I + + Y+ I+ K G++
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
++ TEM+ K IFPD F+Y I + + WS
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGR--------------------WS-------- 307
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKR 304
A +L++ ER D + YN LI+ + G E L+D L +
Sbjct: 308 --------DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
I Y +M++ K + AE + G S + N +I GYC + + +
Sbjct: 360 TIT--YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
L ++ E G ++ + G++ G ++ +S G PD ++L
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS-----SGLCPDIVTCDTLL 472
Query: 425 SKLGDEGSVQD-VEAFVAA------LRTVIPMNR-----QMYHAFIKANIRNGKGV--DE 470
L D G ++D +E F L P N Q Y+ I I GK + +E
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532
Query: 471 LLDSMKADGIDEDEET 486
L + M GI D T
Sbjct: 533 LYEEMPHRGIVPDTIT 548
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 130/279 (46%), Gaps = 16/279 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+N +V++ + +A + +M GI +T+TY+ ++ + K + + + M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 193 KAKNIFPDNFSYRICINSY-GARSDLEGMEIILREMESQPHIVLDWSTYASAAH-FYIKA 250
K P+ ++ I+ Y GA+ +GME +L EM ++ +V D +TY + H FY+
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGME-LLHEM-TETGLVADTTTYNTLIHGFYLVG 444
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW--------DLEKTAC 302
+L + A D+L++ D + + L+ G + L ++ DL+ +
Sbjct: 445 DL-NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 303 KRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
+ D Y ++ L+ G+ EAE++ +E G DT +++I G C +
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
A + + + K + ++ + GY AG+ + G +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/265 (18%), Positives = 114/265 (43%), Gaps = 12/265 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L+ VR + D +S ++KM+ I ++N ++ + + ++
Sbjct: 82 FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKIT 141
Query: 194 AKNIFPDNFSYRICINSYGARSDL-EGMEII--LREMESQPHIVLDWSTYASAAHFYIKA 250
+ PD ++ ++ + E ++ + E +P++V T+ + + +
Sbjct: 142 KLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVV----TFTTLMNGLCRE 197
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD- 309
I +A +L + E Q I Y ++ G+ L L L K +I +
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL--LRKMEEVSHIIPNV 255
Query: 310 --YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y ++++L K G H +A+ + E + G D N++I+G+C++G +AE +L++
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGK 392
++E+ + ++ + + GK
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGK 340
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 56 NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFL 115
NG + V +I L +F +A E+ + M +GI V ++ +D + +
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI-VPDTITYSSMIDGLCKQSRLD 563
Query: 116 SAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A F ++ K T+ L+N Y + + D L F +M GI + +TY ++
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
C + K G D+ EM + ++PD + R
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 156/367 (42%), Gaps = 26/367 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ AL++ + ++ D AL R M++ I S + YN ++ Y G+ ++ ++L EM
Sbjct: 327 TFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 386
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+AK + PD +Y I++Y D + ++M + ++ D TY+S +
Sbjct: 387 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK-GVLPDAITYSSLIRVLCEEKR 445
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A + K + Q D Y LI + GN L L D A Y
Sbjct: 446 LSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSV 505
Query: 313 MLEALMKLGEHEEAEKVL----KEWELSGNS-YDTRIPN----------AVIIGYCNNGL 357
++ L K EA+++L E + N+ YD + A++ G+C GL
Sbjct: 506 LINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGL 565
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP 417
+ A+ + + ++++ + ++V+ G+ AG + K L +G+ P+
Sbjct: 566 MNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQ-----RGFAPNS 620
Query: 418 KVITSILSKLGDEGSVQDVEAFVAALRTVIPM-NRQMYHAFIKANIRNGKGVDELLD--- 473
S++ L + G V + + + L + + + A I N+ G VD +LD
Sbjct: 621 TSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGN-VDAVLDVLH 679
Query: 474 SMKADGI 480
M DG+
Sbjct: 680 GMAKDGL 686
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 126/303 (41%), Gaps = 8/303 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ + R + D A M + G+ + +T+N ++ K G+ E V EM
Sbjct: 187 TYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM 246
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD SY + Y + EM +Q I+ D T+ S H KA
Sbjct: 247 MREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM-TQKGIMPDVVTFTSLIHVMCKAGN 305
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE-VLRLWDLEKTACKRYINRDYI 311
++ A ++++ ER Q + + + LI + G + +L + + + K + Y
Sbjct: 306 LEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSV-VCYN 364
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++ +G +EA ++L E E G D + +I YC N +A + + ++EK
Sbjct: 365 ALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK 424
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G +++ + + + K + + G +PD TS++ EG
Sbjct: 425 GVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKL-----GLQPDEFTYTSLIDGHCKEG 479
Query: 432 SVQ 434
+V+
Sbjct: 480 NVE 482
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/389 (19%), Positives = 149/389 (38%), Gaps = 17/389 (4%)
Query: 116 SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
SA +F ++ D TY L+ + +ALS R M+ G + +TYN ++
Sbjct: 133 SARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLV 192
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
+ + G+ + ++ M + P+ ++ +N +E + EM + +
Sbjct: 193 AAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMRE-GL 251
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
D +Y + Y KA +A V + ++ D + + LI + GN +
Sbjct: 252 APDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVT 311
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
L + + + +++ K G ++A ++ NA+I GYC
Sbjct: 312 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYC 371
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
G + A +L ++ KG +++ + + Y T F+ + L KG
Sbjct: 372 MVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE-----KGV 426
Query: 414 KPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ----MYHAFIKANIRNG--KG 467
PD +S++ L +E + D + +I + Q Y + I + + G +
Sbjct: 427 LPDAITYSSLIRVLCEEKRLSDAHVL---FKNMIKLGLQPDEFTYTSLIDGHCKEGNVER 483
Query: 468 VDELLDSMKADGIDEDEETKEILVCTMEK 496
L D M G+ D T +L+ + K
Sbjct: 484 ALSLHDKMVKAGVLPDVVTYSVLINGLSK 512
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 143/340 (42%), Gaps = 17/340 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +++N + + + A F +M G+A ++YN ++ Y K G + V EM
Sbjct: 222 TFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM 281
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K I PD ++ I+ +LE ++R+M + + ++ T+ + + K
Sbjct: 282 TQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRER-GLQMNEVTFTALIDGFCKKGF 340
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYI 311
+D A ++ + + + YN LI+ Y +G E L ++E K + Y
Sbjct: 341 LDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDV-VTYS 399
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T++ A K + A ++ ++ G D +++I C + +A + +++++
Sbjct: 400 TIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKL 459
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSILSKLGD 429
G ++ + G+ G ER ALS++ + G PD + +++ L
Sbjct: 460 GLQPDEFTYTSLIDGHCKEGNVER-------ALSLHDKMVKAGVLPDVVTYSVLINGLSK 512
Query: 430 EGSVQDVEAFVAAL--RTVIPMNRQ---MYHAFIKANIRN 464
+ + + L IP N + + H KA +++
Sbjct: 513 SARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKS 552
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 110/265 (41%), Gaps = 26/265 (9%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+ +++ A F+ M ++G+ TY ++ + K G E+ + +M
Sbjct: 432 TYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKM 491
Query: 193 KAKNIFPDNFSYRICIN--SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+ PD +Y + IN S AR+ +E +++ + +P + + Y + H KA
Sbjct: 492 VKAGVLPDVVTYSVLINGLSKSARA-MEAQQLLFKLYHEEP--IPANTKYDALMHCCRKA 548
Query: 251 ---------------NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
L+++A V + +R DG Y+ LI + GN V++
Sbjct: 549 ELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGN---VMKAL 605
Query: 296 DLEKTACKRYI---NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
K +R + I+++ L + G EA++V+++ + D A+I
Sbjct: 606 SFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLN 665
Query: 353 CNNGLVQNAEAILEDLVEKGKATTP 377
N G V +L + + G +P
Sbjct: 666 LNEGNVDAVLDVLHGMAKDGLLPSP 690
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 197/454 (43%), Gaps = 25/454 (5%)
Query: 35 IISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGIC 94
I+S P L+ W + V + + ++R+L R + +AL+ +WM ++ +
Sbjct: 138 ILSAPSTPLNSTALLLEKW--SHQLVGLEDFPYLLRELGNRGEWERALQGYEWMVQQ-VH 194
Query: 95 VFAPCDH--AVQLDLIGRVHGFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKA 150
+ + ++ + +GR+ A F+ + Y A+++ Y R + +A
Sbjct: 195 LRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREA 254
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTG-QYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
L F+ MK+ G + +TYN I+ K G ++ D+ EM+ + + PD ++ I
Sbjct: 255 LKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIA 314
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
E + + EM+ + I D T+ + K ++ A+ ++ +
Sbjct: 315 VCSRGGLWEDSQRVFAEMQRRG-IEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNIS 373
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
+ + Y+ +I Y LG E + L+ K + R Y T+++ KLG ++A
Sbjct: 374 PNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIA 433
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGY 387
K+ E G D NA+I Y G ++A + + + KG+ PN +++ + Y
Sbjct: 434 CKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKM--KGEGLVPNVLTYSALIDSY 491
Query: 388 FDAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-R 444
AG + +V+ E K G KPD + +S++ G V+D + + +
Sbjct: 492 SKAGMHQD-------VSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQ 544
Query: 445 TVIPMNRQMYHAFIKANIRNGKGVDELLDSMKAD 478
I N Y++ I A R G+ + L+++KA+
Sbjct: 545 AGIQPNIVTYNSLIDAYGRYGQA--DKLEAVKAN 576
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 146/376 (38%), Gaps = 60/376 (15%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG-IALSTLTYNDIMCLYSKTGQYEKVP 186
+ T TYG +++ ++ T AL+ RKM+E+ I + + Y+ I+ K G++
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
++ TEM+ K IFPD F+Y I + + WS
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGR--------------------WS-------- 307
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKR 304
A +L++ ER D + YN LI+ + G E L+D L +
Sbjct: 308 --------DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
I Y +M++ K + AE + G S + N +I GYC + + +
Sbjct: 360 TIT--YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
L ++ E G ++ + G++ G ++ +S G PD ++L
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS-----SGLCPDIVTCDTLL 472
Query: 425 SKLGDEGSVQD-VEAFVAA------LRTVIPMNR-----QMYHAFIKANIRNGKGV--DE 470
L D G ++D +E F L P N Q Y+ I I GK + +E
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532
Query: 471 LLDSMKADGIDEDEET 486
L + M GI D T
Sbjct: 533 LYEEMPHRGIVPDTIT 548
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 130/279 (46%), Gaps = 16/279 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+N +V++ + +A + +M GI +T+TY+ ++ + K + + + M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 193 KAKNIFPDNFSYRICINSY-GARSDLEGMEIILREMESQPHIVLDWSTYASAAH-FYIKA 250
K P+ ++ I+ Y GA+ +GME +L EM ++ +V D +TY + H FY+
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGME-LLHEM-TETGLVADTTTYNTLIHGFYLVG 444
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW--------DLEKTAC 302
+L + A D+L++ D + + L+ G + L ++ DL+ +
Sbjct: 445 DL-NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 303 KRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
+ D Y ++ L+ G+ EAE++ +E G DT +++I G C +
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
A + + + K + ++ + GY AG+ + G +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 56 NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFL 115
NG + V +I L +F +A E+ + M +GI V ++ +D + +
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI-VPDTITYSSMIDGLCKQSRLD 563
Query: 116 SAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A F ++ K T+ L+N Y + + D L F +M GI + +TY ++
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
C + K G D+ EM + ++PD + R
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 111/263 (42%), Gaps = 41/263 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
++ L+ C+ + ALS F K+ ++G+ +T+N ++ V D ++E
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLL-------HGLCVEDRVSE- 167
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
A N+F F E +P++V T+ + + +
Sbjct: 168 -ALNLFHQMF-----------------------ETTCRPNVV----TFTTLMNGLCREGR 199
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
I +A +L + E Q I Y ++ G+ L L L K +I +
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL--LRKMEEVSHIIPNVVI 257
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++++L K G H +A+ + E + G D N++I+G+C++G +AE +L++++
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 370 EKGKATTPNSWAVVAAGYFDAGK 392
E+ + ++ + + GK
Sbjct: 318 ERKISPDVVTYNALINAFVKEGK 340
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 146/376 (38%), Gaps = 60/376 (15%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG-IALSTLTYNDIMCLYSKTGQYEKVP 186
+ T TYG +++ ++ T AL+ RKM+E+ I + + Y+ I+ K G++
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
++ TEM+ K IFPD F+Y I + + WS
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGR--------------------WS-------- 307
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKR 304
A +L++ ER D + YN LI+ + G E L+D L +
Sbjct: 308 --------DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
I Y +M++ K + AE + G S + N +I GYC + + +
Sbjct: 360 TIT--YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
L ++ E G ++ + G++ G ++ +S G PD ++L
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS-----SGLCPDIVTCDTLL 472
Query: 425 SKLGDEGSVQD-VEAFVAA------LRTVIPMNR-----QMYHAFIKANIRNGKGV--DE 470
L D G ++D +E F L P N Q Y+ I I GK + +E
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532
Query: 471 LLDSMKADGIDEDEET 486
L + M GI D T
Sbjct: 533 LYEEMPHRGIVPDTIT 548
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 130/279 (46%), Gaps = 16/279 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+N +V++ + +A + +M GI +T+TY+ ++ + K + + + M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 193 KAKNIFPDNFSYRICINSY-GARSDLEGMEIILREMESQPHIVLDWSTYASAAH-FYIKA 250
K P+ ++ I+ Y GA+ +GME +L EM ++ +V D +TY + H FY+
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGME-LLHEM-TETGLVADTTTYNTLIHGFYLVG 444
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW--------DLEKTAC 302
+L + A D+L++ D + + L+ G + L ++ DL+ +
Sbjct: 445 DL-NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 303 KRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
+ D Y ++ L+ G+ EAE++ +E G DT +++I G C +
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
A + + + K + ++ + GY AG+ + G +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 56 NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFL 115
NG + V +I L +F +A E+ + M +GI V ++ +D + +
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI-VPDTITYSSMIDGLCKQSRLD 563
Query: 116 SAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A F ++ K T+ L+N Y + + D L F +M GI + +TY ++
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
C + K G D+ EM + ++PD + R
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/265 (18%), Positives = 114/265 (43%), Gaps = 12/265 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L+ VR + D +S ++KM+ I ++N ++ + + ++
Sbjct: 82 FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKIT 141
Query: 194 AKNIFPDNFSYRICINSYGARSDL-EGMEII--LREMESQPHIVLDWSTYASAAHFYIKA 250
+ PD ++ ++ + E + + + E +P++V T+ + + +
Sbjct: 142 KLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVV----TFTTLMNGLCRE 197
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD- 309
I +A +L + E Q I Y ++ G+ L L L K +I +
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL--LRKMEEVSHIIPNV 255
Query: 310 --YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y ++++L K G H +A+ + E + G D N++I+G+C++G +AE +L++
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGK 392
++E+ + ++ + + GK
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGK 340
>gi|293334337|ref|NP_001169631.1| uncharacterized protein LOC100383512 [Zea mays]
gi|224030539|gb|ACN34345.1| unknown [Zea mays]
gi|413953501|gb|AFW86150.1| hypothetical protein ZEAMMB73_846563 [Zea mays]
Length = 790
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 21/247 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ R + ++AL F +MK GIA S T ++ L+ K Y K + ++M
Sbjct: 315 TYSLLISASSRHGKGEQALRLFEEMKGQGIAPSNYTCASLLALHCKNEDYPKALALFSDM 374
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ + PD Y I I YG E E+E + ++ D TY + A ++ A
Sbjct: 375 ESSKVIPDEVIYGILIRIYGKLGLYEEARQTFGEIE-KAGLLNDEQTYVAMAQVHLNAGD 433
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR-------Y 305
D+A +VL+ + R + Y+ L+ + + K +V+ D + + +
Sbjct: 434 CDRALEVLESMKTRGVKPSRFSYSALLRCHVA---KEDVVAAEDTFRALSQSQHGLPDAF 490
Query: 306 INRDYITMLEALMKLGEHEEAEK----VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
D ML M+LG ++A +L+E G D + V+ YC +G+V++A
Sbjct: 491 CCND---MLRLYMRLGRLDKARALVSVLLRE---DGFQLDENLSTTVMEFYCKSGMVEDA 544
Query: 362 EAILEDL 368
E +LED+
Sbjct: 545 EKLLEDI 551
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 130/311 (41%), Gaps = 19/311 (6%)
Query: 113 GFLSAESYFSNLKDD---EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
G+ A +F+ +K E + Y LL Y R + A F +M ++G +
Sbjct: 152 GWRQARDFFAWMKLQLCYEPSVVAYTVLLRLYGRVGKVKLAEETFLEMLQVGCEPDAVAC 211
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
++C Y++ G++E + + ++ + + P Y I+S + L G I + +
Sbjct: 212 GTLLCAYARWGRHEDMMLFYSAVRGRGLVPPISVYNYMISSL-QKQKLHGKVIHVWKQML 270
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ + TY +K +L+++A D+ + R + Y+ LIS + G
Sbjct: 271 EAGAPPNQFTYTVVIGSLVKEDLLEEAVDLFGEMRRRRFVPEEATYSLLISASSRHGKGE 330
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+ LRL++ K N ++L K ++ +A + + E S IP+ VI
Sbjct: 331 QALRLFEEMKGQGIAPSNYTCASLLALHCKNEDYPKALALFSDMESS-----KVIPDEVI 385
Query: 350 IG-----YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
G Y GL + A ++ + G ++ +A + +AG +R + +++
Sbjct: 386 YGILIRIYGKLGLYEEARQTFGEIEKAGLLNDEQTYVAMAQVHLNAGDCDRALEVLES-- 443
Query: 405 SVYVEGKGWKP 415
++ +G KP
Sbjct: 444 ---MKTRGVKP 451
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 64/366 (17%), Positives = 141/366 (38%), Gaps = 41/366 (11%)
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
+ L +DE QTY A+ ++ D+AL MK G+ S +Y+ ++ +
Sbjct: 412 AGLLNDE---QTYVAMAQVHLNAGDCDRALEVLESMKTRGVKPSRFSYSALLRCHVAKED 468
Query: 182 YEKVPDVLTEM-KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
D + ++++ PD F + Y L+ ++ + + LD +
Sbjct: 469 VVAAEDTFRALSQSQHGLPDAFCCNDMLRLYMRLGRLDKARALVSVLLREDGFQLDENLS 528
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
+ FY K+ +++ A +L+ + + L+ +YA N+ V+ LE+
Sbjct: 529 TTVMEFYCKSGMVEDAEKLLEDIQRNRKPVKVPTLLLLVEMYAR--NRPSVV----LEER 582
Query: 301 ACKRYINRDYIT------------------MLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
+ R + + ++ L + G +EA + + G D
Sbjct: 583 SSSRALGSSAASVALNSLLDMPGGLSSVSLLISRLAREGSTDEARFIYDQLTELGTKPDD 642
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA---GYFDAGKTERGFQC 399
+I+ Y ++ A ++L + A+ P+ V A + G+ E +
Sbjct: 643 SAVATLIVQYGQAKQLERA----QELFDSASASFPDGALVCNAMVDAFCKCGRAEDAYH- 697
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV-AALRTVIPMNRQMYHAFI 458
L + + +G + + +++ L G Q+VE + R + ++ +Y+ FI
Sbjct: 698 ----LFMEMADQGSYRNAVTASILVTHLTKHGKFQEVENIMHGCFRDEVQLDTALYNTFI 753
Query: 459 KANIRN 464
K+ + +
Sbjct: 754 KSMLES 759
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 23/288 (7%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL Y R R+ D L +K+ +MG+ L+ + YN ++ + + G +K VLTEM K
Sbjct: 661 LLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKG 720
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
I D +Y I Y S +E +M I + +TY + L+ A
Sbjct: 721 ISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSG-ISPNITTYNALLEGLSTNGLMRDA 779
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
++ + ER + YN L+S + +GNK + ++L+ T Y +++
Sbjct: 780 DKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQD 839
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNA-----VIIGYCNNGL-----------VQN 360
K G+ +A ++L E G RIPN+ +I G+C QN
Sbjct: 840 YAKAGKMRQARELLNEMLTRG-----RIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQN 894
Query: 361 -AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
A+ +L ++ EKG + ++ +++ + GK + + +K + +Y
Sbjct: 895 EAKKLLREMCEKGHVPSESTLMYISSNFSAPGKRDDAKRLLKTVIGLY 942
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 158/377 (41%), Gaps = 33/377 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ALL+ + + + A + +KM++ + + +T++ I+ Y+K G K +VL +M
Sbjct: 378 TYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKM 437
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
NI P+ F Y I ++ Y E +EM+S W + F I N
Sbjct: 438 VQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKS-------WGLEENNIIFDILLNN 490
Query: 253 IDKASDVLKKAEERLEQ-------KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
+ K S +K+A+ ++ D Y+ L+ Y GN+S L + ++
Sbjct: 491 L-KRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQF 549
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y + + L++LG++E + EL G + D N+V+ Y G +NA +L
Sbjct: 550 DVVAYNALTKGLLRLGKYEPKSVFSRMIEL-GLTPDCVTYNSVMNTYFIQGKTENALDLL 608
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
++ G ++ ++ G G E+ + L+V G+ P P + +L
Sbjct: 609 NEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAV-----GYVPTPIIHKFLLK 663
Query: 426 KLGDEGSVQDVEAFVAALRTVIPM----NRQMYHAFIKANIRNG--KGVDELLDSMKADG 479
+ +A + + ++ M N+ +Y+ I R G K + +L M G
Sbjct: 664 AYSRS---RKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKG 720
Query: 480 IDEDEETKEILV---CT 493
I D T L+ CT
Sbjct: 721 ISADIVTYNALIRGYCT 737
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 161/362 (44%), Gaps = 24/362 (6%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+ + +Y +++ ++ + +A +H +M GI++ + +M K G+ ++ +
Sbjct: 303 DPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEE 362
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
+ + N+ P+ +Y ++ + D+E E +L++ME + H++ + T++S + Y
Sbjct: 363 MFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKE-HVLPNVVTFSSIINGY 421
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV------LRLWDLEKTA 301
K +++KA +VL+K + + Y L+ Y G ++ W LE+
Sbjct: 422 AKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEEN- 480
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
N + +L L + G +EA+ ++K+ G D ++++ GY G A
Sbjct: 481 -----NIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAA 535
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
++++++ EK ++ + G GK E K+ S +E G PD
Sbjct: 536 LSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEP-----KSVFSRMIE-LGLTPDCVTYN 589
Query: 422 SILSKLGDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNG--KGVDELLDSMKA 477
S+++ +G ++ + +++ V+P N Y+ I + G + V +L M A
Sbjct: 590 SVMNTYFIQGKTENALDLLNEMKSYGVMP-NMVTYNILIGGLCKTGAIEKVISVLHEMLA 648
Query: 478 DG 479
G
Sbjct: 649 VG 650
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 118/273 (43%), Gaps = 1/273 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++N Y Q +T+ AL +MK G+ + +TYN ++ KTG EKV VL EM
Sbjct: 587 TYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEM 646
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
A P ++ + +Y + + I +++ + L+ Y + + +
Sbjct: 647 LAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMG-LNLNQMVYNTLITVLCRLGM 705
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
KA+ VL + + D + YN LI Y + + + + + Y
Sbjct: 706 TKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNA 765
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+LE L G +A+K++ E G + N ++ G+ G +++ + +++ KG
Sbjct: 766 LLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKG 825
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
T ++ V+ Y AGK + + + L+
Sbjct: 826 FIPTTGTYNVLIQDYAKAGKMRQARELLNEMLT 858
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T++ K G ++ +L E G +D+ N ++ GYC GLVQ AE I+ +LV
Sbjct: 78 YNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLV 137
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG--KGWKPDPKVITSILSKL 427
G + GY + G R AL + +G G KPD ++++
Sbjct: 138 GGGVPLDAIGLNTLVDGYCEVGLVSR-------ALDLVEDGWKNGVKPDIVTYNTLVNAF 190
Query: 428 GDEGSVQDVEAFV 440
G + E+ V
Sbjct: 191 CKRGDLAKAESVV 203
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 63/340 (18%), Positives = 135/340 (39%), Gaps = 36/340 (10%)
Query: 156 KMKEMGIALSTL--------TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
K+ ++G+AL L TYN ++ + K G ++ +L+EM K + D+ + I
Sbjct: 57 KVGDLGLALGYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNIL 116
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
+ Y ++ E I+ + + LD + Y + L+ +A D+++ +
Sbjct: 117 VKGYCQIGLVQYAEWIMGNLVGGG-VPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG 175
Query: 268 EQKDGIGYNFLISLYASLGN------------------KSEVLRLWDLEKTACKRYINRD 309
+ D + YN L++ + G+ +S VL +E R +
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPT 235
Query: 310 YITMLEALMKLGEHEEAEKVLKEWE---LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+T + +H + +E +SG D ++++ G C +G + A +L
Sbjct: 236 VVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLR 295
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
++ G S+ + + +G+ F ++ + V +G D + T+++
Sbjct: 296 EMYNMGLDPNHVSYTTIISALLKSGRVMEAFN-HQSQMVV----RGISIDLVLCTTMMDG 350
Query: 427 LGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNG 465
L G ++ E F L+ + N Y A + + + G
Sbjct: 351 LFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVG 390
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 147/340 (43%), Gaps = 13/340 (3%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L++ + + A F ++ + G+ + +++N ++ K G E+ + M+
Sbjct: 145 FNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVME 204
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
++ + PD F++ IN L+ ++ EM + +V + T+ K +
Sbjct: 205 SERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK-GLVPNGVTFTVLIDGQCKGGKV 263
Query: 254 DKASDVLKKAEERLEQ---KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
D A LK + L Q D + YN LI+ +G+ E RL + + R +
Sbjct: 264 DLA---LKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITF 320
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T+++ K G+ E A ++ + G D +I G C +G V +AE +L D++
Sbjct: 321 TTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLS 380
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G ++ +V + G GF+ +K ++ G P ++++ L +
Sbjct: 381 AGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKE-----MQSDGHVPGVVTYNALMNGLCKQ 435
Query: 431 GSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVD 469
G V++ + + A+ V + N Y+ ++ + ++G VD
Sbjct: 436 GQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVD 475
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 114/261 (43%), Gaps = 1/261 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ AL+N ++ + D+ F +M G+ + +T+ ++ K G+ + M
Sbjct: 214 TFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMM 273
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
A+ + PD +Y IN DL+ ++ EM S + D T+ + K
Sbjct: 274 LAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEM-SASGLRPDRITFTTLIDGCCKYGD 332
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
++ A ++ ++ E + D + + LIS G + R+ +A + + Y
Sbjct: 333 MESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTM 392
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ K G K+LKE + G+ NA++ G C G V+NA+ +L+ ++ G
Sbjct: 393 VVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVG 452
Query: 373 KATTPNSWAVVAAGYFDAGKT 393
A ++ ++ G+ G +
Sbjct: 453 VAPNDITYNILLEGHSKHGSS 473
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 148/356 (41%), Gaps = 15/356 (4%)
Query: 142 VRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDN 201
+R + +++ + + ++ + G + +N +M + K G V E+ + + P
Sbjct: 118 LRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTV 177
Query: 202 FSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK 261
S+ I+ +E + MES+ + D T+++ + K +D+ S +
Sbjct: 178 VSFNTLISGCCKAGAVEEGFRLKGVMESE-RVCPDVFTFSALINGLCKEGRLDEGSLLFD 236
Query: 262 KAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLG 321
+ + +G+ + LI G L+ + + R Y ++ L K+G
Sbjct: 237 EMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVG 296
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+ +EA +++ E SG D +I G C G +++A I +VE+G ++
Sbjct: 297 DLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFT 356
Query: 382 VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
V+ +G G+ + ++ LS G+KPD T ++ +G+V +
Sbjct: 357 VLISGLCRDGRVHDAERMLRDMLSA-----GFKPDDPTYTMVVDCFCKKGNVXMGFKLLK 411
Query: 442 ALRT------VIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
+++ V+ N M + ++N K LLD+M G+ ++ T IL+
Sbjct: 412 EMQSDGHVPGVVTYNALMNGLCKQGQVKNAK---MLLDAMLNVGVAPNDITYNILL 464
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 15/139 (10%)
Query: 109 GRVHGFLSAESYFSNL-----KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
GRVH AE ++ K D+ TY +++C+ ++ ++M+ G
Sbjct: 366 GRVH---DAERMLRDMLSAGFKPDDPTYTM---VVDCFCKKGNVXMGFKLLKEMQSDGHV 419
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII 223
+TYN +M K GQ + +L M + P++ +Y I + + G +
Sbjct: 420 PGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSK----HGSSVD 475
Query: 224 LREMESQPHIVLDWSTYAS 242
+ S+ +V D+++Y +
Sbjct: 476 VDIFNSEKGLVKDYASYTA 494
>gi|223946379|gb|ACN27273.1| unknown [Zea mays]
gi|413924536|gb|AFW64468.1| pentatricopeptide repeat 5 [Zea mays]
Length = 386
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 110/245 (44%), Gaps = 19/245 (7%)
Query: 100 DHAVQLDLIG-------RVHGFLSAESYFSNLKDDEK---TYQTYGALLNCYVRQRQTDK 149
D +V LIG + A YF +K E+ T TY LL + + T +
Sbjct: 45 DTSVYNSLIGAHLHSRDKTKALAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQ 104
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
F+ + E ++ TYN ++ Y K G +++ VL MK+ PD ++ I I+
Sbjct: 105 VDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRMKSTQCRPDVITFNILID 164
Query: 210 SYGARSDLEGMEII----LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
SYG + + ME + LR E H T+ S Y +A L +KA V++K EE
Sbjct: 165 SYGRKQTFDKMEQVFKSLLRSKERPTH-----PTFNSMITNYGRARLREKAESVVEKMEE 219
Query: 266 RLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEE 325
+ + + LI +YA S+ +++D T+ + +MLEA G H E
Sbjct: 220 LGFKPNYVTQECLIIMYAHCDCVSKARQVFDELVTSQTKVHLSSLNSMLEAYCMNGLHTE 279
Query: 326 AEKVL 330
A+++L
Sbjct: 280 ADRLL 284
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 134/321 (41%), Gaps = 16/321 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L++ Y R D+A+ +++M E GI TYN ++ ++ G++E+ + EM
Sbjct: 459 TYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEM 518
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGM-----EIILREMESQPHIVLDWSTYASAAHFY 247
+ + PD SY +++Y L+ M +I +ES +V S +
Sbjct: 519 ENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVN-- 576
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
NL D L+ R + N +IS+Y G +V + L K +
Sbjct: 577 ---NLSDTEKAFLELRRRRCSLDINV-LNAMISIYGKNGMVKKVEEILSLMKESSINLST 632
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y +++ +LG+ E+ E +L E + S D N +I Y G ++ A + +
Sbjct: 633 ATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSE 692
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ G ++ + Y E ++ Y+ G KP+ + +IL +
Sbjct: 693 MKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVR-----YMVTHGCKPNERTYNTILQEY 747
Query: 428 GDEGSVQDVEAFVAALRTVIP 448
G + D ++F++ L + P
Sbjct: 748 CSHGRIADGKSFISNLPELHP 768
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 21/227 (9%)
Query: 109 GRVHGFLSAESYFSNLKDDEKTY------------QTYGALLNCYVRQRQTDKALSHFRK 156
G V + S +NL D EK + A+++ Y + K
Sbjct: 563 GLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSL 622
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
MKE I LST TYN +M +YS+ G EK ++LTE+K+ PD +SY I +YG +
Sbjct: 623 MKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQ 682
Query: 217 LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
++ + EM+ +V D TY Y+ ++ ++A D+++ + + YN
Sbjct: 683 MKEASRLFSEMKCS-GLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYN 741
Query: 277 FLISLYASLG----NKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
++ Y S G KS + L +L KR R +LE L K
Sbjct: 742 TILQEYCSHGRIADGKSFISNLPELHPGISKREQQR----LLELLAK 784
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 162/413 (39%), Gaps = 71/413 (17%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT------------ 179
Y AL++ R + A++ FR+M G+ + +TYN ++ +YSK
Sbjct: 177 SAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLALVD 236
Query: 180 ------------------------GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARS 215
Y++ V EM+A PD + ++ YG
Sbjct: 237 SMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKAR 296
Query: 216 DLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG 272
+ +L+EME P +V TY S Y+K L+++A+ + ++ E + + D
Sbjct: 297 RYDEAIGVLKEMEQGGCPPSVV----TYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDV 352
Query: 273 IGYNFLIS-------LYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKL----G 321
I Y L+S + A++G +E+LR CK + AL+KL G
Sbjct: 353 ITYTTLVSGLDRAGKIDAAIGTYNEMLR------NGCK-----PNLCTYNALIKLHGVRG 401
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+ E V E +G D N ++ + NGL + +++ + G +++
Sbjct: 402 KFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYV 461
Query: 382 VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
+ + Y G ++ + K + G PD ++LS L G + E A
Sbjct: 462 SLISSYSRCGLFDQAMEIYKRMIEA-----GIHPDISTYNAVLSALARGGRWEQAEKLFA 516
Query: 442 ALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCTM 494
+ + ++ ++ + N K +D+ + S+ D E E+ LV T+
Sbjct: 517 EMENLDSRPDELSYSSLLHAYANAKKLDK-MKSLSEDIYAERIESHNGLVKTL 568
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 137/332 (41%), Gaps = 5/332 (1%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVH-GFLSAESYFSNLKD 126
+I L + RF A+ V M G+C A + V L + ++ + + +++
Sbjct: 182 LISALSRASRFRDAVAVFRRMVANGVCP-ALVTYNVVLHVYSKIAVPWKEVLALVDSMRK 240
Query: 127 DEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
D TY L++C R+ +A F +M+ G +T N ++ +Y K +Y++
Sbjct: 241 DGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDE 300
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
VL EM+ P +Y I+SY LE + EME + I D TY +
Sbjct: 301 AIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVK-GIEPDVITYTTLV 359
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
+A ID A + + + YN LI L+ G E++ ++D ++A
Sbjct: 360 SGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFV 419
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+ T+L + G E V KE + SG + ++I Y GL A I
Sbjct: 420 PDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEI 479
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
+ ++E G +++ V + G+ E+
Sbjct: 480 YKRMIEAGIHPDISTYNAVLSALARGGRWEQA 511
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 158/378 (41%), Gaps = 60/378 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T +LL+ Y + R+ D+A+ ++M++ G S +TYN ++ Y K G E+ + EM
Sbjct: 284 TLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEM 343
Query: 193 KAKNIFPDNFSY------------------------------RIC-----INSYGARSDL 217
+ K I PD +Y +C I +G R
Sbjct: 344 EVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKF 403
Query: 218 EGMEIILREMESQPHI--VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
M I+ E+ S + V+ W+T + + + L + S V K+ ++ + Y
Sbjct: 404 PEMMIVFDEIRSAGFVPDVVTWNTLLA---VFGQNGLDTEVSGVFKEMKKSGYVPERDTY 460
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKE 332
LIS Y+ G + + ++ K + I+ D Y +L AL + G E+AEK+ E
Sbjct: 461 VSLISSYSRCGLFDQAMEIY---KRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAE 517
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL----VEKGKATTPNSWAVVAAGYF 388
E + D ++++ Y N + +++ ED+ +E + +V +
Sbjct: 518 MENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLV-KTLVLVNSKVN 576
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR-TVI 447
+ TE+ F + + + D V+ +++S G G V+ VE ++ ++ + I
Sbjct: 577 NLSDTEKAF--------LELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSI 628
Query: 448 PMNRQMYHAFIKANIRNG 465
++ Y++ + R G
Sbjct: 629 NLSTATYNSLMHMYSRLG 646
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 12/287 (4%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG---RVHGFLSAESYFSNL 124
++ L K R A +V D M +G+ C+ LIG R A +
Sbjct: 274 VMNQLCKDGRTKDAFKVFDEMRERGV----SCNIVTYNTLIGGLCREMKANEANEVMDQM 329
Query: 125 KDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
K D TY L++ + R+ KALS R +K G++ S +TYN ++ + K G
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
V+ EM+ + I P +Y I I+++ ARSD I LR + + D TY+
Sbjct: 390 SGAGKVVKEMEERGIKPSKVTYTILIDTF-ARSDNMEKAIQLRSSMEELGLTPDVHTYSV 448
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTA 301
H + +++AS + K E+ + + + YN ++ Y G+ LRL+ ++E+
Sbjct: 449 LIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKE 508
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
+ Y M+E L K + +EAE ++++ SG I N +
Sbjct: 509 LPPNV-ASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 107/244 (43%), Gaps = 9/244 (3%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TY ++N + +T A F +M+E G++ + +TYN ++ + + + +V+ +
Sbjct: 269 HTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQ 328
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYI 248
MK+ I P+ +Y I+ + L + R+++S+ P +V TY +
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLV----TYNILVSGFC 384
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTACKRYIN 307
K A V+K+ EER + + Y LI +A N + ++L +E+ ++
Sbjct: 385 KKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVH 444
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y ++ G EA ++ K + I N +++GYC G A + +
Sbjct: 445 -TYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFRE 503
Query: 368 LVEK 371
+ EK
Sbjct: 504 MEEK 507
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 82/182 (45%), Gaps = 8/182 (4%)
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ + GE E++ +L E G S + I +I G C G ++ A+ + ++ + G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
++ V+ G F G ++GF+ + ++ G P+ ++++L +G
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEK-----MQEHGVFPNLHTYNCVMNQLCKDGR 283
Query: 433 VQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKG--VDELLDSMKADGIDEDEETKEI 489
+D +R + N Y+ I R K +E++D MK+DGI+ + T
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNT 343
Query: 490 LV 491
L+
Sbjct: 344 LI 345
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 146/354 (41%), Gaps = 17/354 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L++ ++ + +KA F +M + G+ + TY ++ K G ++ ++ +M+
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQ 260
Query: 194 AKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+FP+ +Y +N G D + +RE +IV ++T +KA
Sbjct: 261 EHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIV-TYNTLIGGLCREMKA 319
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRD 309
N +A++V+ + + + I YN LI + + + L L DL+ +
Sbjct: 320 N---EANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSL-VT 375
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ K G+ A KV+KE E G +I + + ++ A + +
Sbjct: 376 YNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSME 435
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E G ++++V+ G+ G+ + K+ + K ++P+ + +++
Sbjct: 436 ELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVE-----KKFEPNEVIYNTMVLGYCK 490
Query: 430 EG-SVQDVEAFVAALRTVIPMNRQMYHAFIK--ANIRNGKGVDELLDSMKADGI 480
EG S + + F +P N Y I+ R K + L++ M GI
Sbjct: 491 EGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGI 544
>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 138/332 (41%), Gaps = 24/332 (7%)
Query: 111 VHGFLSAESYFSNLKDDEKTYQ------------TYGALLNCYVRQRQTDKALSHFRKMK 158
++ LSA + S L+ EK Q +YG L++ Y R + D+A + F MK
Sbjct: 257 LNALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMK 316
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
+ + Y+ +M Y Q++ +L +M A NI P+ F + I I++YG L
Sbjct: 317 VENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFGRLP 376
Query: 219 GMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
+M+ + P +V T+ S + +A LI +A D+LK+ +ER Y
Sbjct: 377 QAMRTFAQMDKEGFKPDVV----TWNSLIEAHCRAGLITEALDLLKQMQERECVPSLHTY 432
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
N +++ E+ L D + Y T++++ + EA + LK+ +
Sbjct: 433 NIILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREASEYLKQMKS 492
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G T + A+ Y GL + A + + + + G + ++ + AGK
Sbjct: 493 QGLQPSTSVYCALANSYAKRGLCEQAMEVFKSMEKDGVELNLSMLNLLINAFGVAGKYVE 552
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
F L V G PD T+++ L
Sbjct: 553 AFSVFDYILEV-----GMSPDVVTYTTLMKAL 579
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/372 (18%), Positives = 151/372 (40%), Gaps = 81/372 (21%)
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
++ + ++A+ F ++K++G++ + YN I+ ++ + E +++ +M+ PDN
Sbjct: 90 KESRVEEAMLLFDQLKQLGVSPGPMAYNAIVGTCAREDRLETALELMNQMRGSGFQPDNV 149
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
+Y + + + G+++I R + AN+
Sbjct: 150 NYTLVFQACAKKR--VGVDVISR----------------------VCANI---------- 175
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-RDYITMLEALMKLG 321
+E LE D YN +I+ Y G+ + + L + AC + R Y +++E L+ +
Sbjct: 176 EQEGLEM-DTKLYNDVINAYCRAGDPDKAFQYMGLMQ-ACDLVPDVRSYSSLIETLVVVR 233
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
++AE E + + R NA++ Y L++ E +++D + G + S+
Sbjct: 234 RLDDAEAAYAEMKSKSYKINLRTLNALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYG 293
Query: 382 VVAAGYFDAGKTER---GFQCMKAA------------LSVYVEGKGW------------- 413
++ Y AG+ ++ F MK + Y + W
Sbjct: 294 LLIDAYSRAGRLDQAKAAFHNMKVENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYAS 353
Query: 414 --KPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ-------MYHAFIKANIRN 464
KP+ + ++ G G + A+RT M+++ +++ I+A+ R
Sbjct: 354 NIKPNQFIFNILIDTYGKFGRLPQ------AMRTFAQMDKEGFKPDVVTWNSLIEAHCRA 407
Query: 465 GKGVDELLDSMK 476
G + E LD +K
Sbjct: 408 GL-ITEALDLLK 418
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/431 (19%), Positives = 176/431 (40%), Gaps = 35/431 (8%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGI--------CVFAPC-DHAVQLDLIGRVHGFLSAE 118
I+ + R ALE+ + M G VF C V +D+I RV + E
Sbjct: 119 IVGTCAREDRLETALELMNQMRGSGFQPDNVNYTLVFQACAKKRVGVDVISRVCANIEQE 178
Query: 119 SYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
L+ D K Y ++N Y R DKA + M+ + +Y+ ++
Sbjct: 179 ----GLEMDTKLYND---VINAYCRAGDPDKAFQYMGLMQACDLVPDVRSYSSLIETLVV 231
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
+ + EMK+K+ + + +++Y +S LE +E ++++ E + L
Sbjct: 232 VRRLDDAEAAYAEMKSKSYKINLRTLNALLSAYTRKSLLEQVEKLMQDAE-DAGLKLSTF 290
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DL 297
+Y Y +A +D+A + + Y+ L+ Y + +RL D+
Sbjct: 291 SYGLLIDAYSRAGRLDQAKAAFHNMKVENVPANAFIYSRLMVAYRNARQWDGTIRLLKDM 350
Query: 298 EKTACK--RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
+ K ++I + +++ K G +A + + + G D N++I +C
Sbjct: 351 YASNIKPNQFI---FNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRA 407
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVV--AAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
GL+ A +L+ + E+ + +++ ++ A G+ + K A L + KG
Sbjct: 408 GLITEALDLLKQMQERECVPSLHTYNIILNALGWHNRWKE-------MALLLDEMRFKGL 460
Query: 414 KPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG--KGVDE 470
P+ T+++ G ++ ++ +++ + + +Y A + + G + E
Sbjct: 461 DPNVVTYTTLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYCALANSYAKRGLCEQAME 520
Query: 471 LLDSMKADGID 481
+ SM+ DG++
Sbjct: 521 VFKSMEKDGVE 531
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 11/256 (4%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
LLN + R TD ++KM +G+ + YN ++ K+G EK ++L+EM++K
Sbjct: 170 VLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESK 229
Query: 196 NIFPDNFSYRICINSYGARS-DLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKAN 251
+FPD F+Y I+ Y + E + + R ME + P IV TY S H + K
Sbjct: 230 CVFPDLFTYNTLISLYCKKGMHYEALSVQDR-MEREGIKPDIV----TYNSLIHGFCKEG 284
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+ +A + K E R + + Y LI Y L + + LRL + + Y
Sbjct: 285 RMREAMRLFK--EIRDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYN 342
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++L L ++G +A K+L E D N +I YC G +++A + +VE
Sbjct: 343 SILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEA 402
Query: 372 GKATTPNSWAVVAAGY 387
G ++ + G+
Sbjct: 403 GLKLDQFTYKALIHGF 418
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 144/327 (44%), Gaps = 28/327 (8%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLI---GRVHGFLS------AESYFSNL 124
K+ +AL V D M R+GI + D++ +HGF A F +
Sbjct: 247 KKGMHYEALSVQDRMEREGI----------KPDIVTYNSLIHGFCKEGRMREAMRLFKEI 296
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
+D + TY L++ Y R D+AL +M+ G+ + +TYN I+ + G+
Sbjct: 297 RDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRD 356
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE-GMEIILREMESQPHIVLDWSTYASA 243
+L EM K I PDN + IN+Y D++ +++ R +E+ + LD TY +
Sbjct: 357 ANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAG--LKLDQFTYKAL 414
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTA 301
H + K +D A ++L + Y++L+ Y + N+ VL+L D + K
Sbjct: 415 IHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGL 474
Query: 302 CKRYINRD-YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
C +++ Y ++ K + + A+K+ + G D+ I ++ Y G
Sbjct: 475 C---VDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANA 531
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGY 387
A +L+++ ++ T + + A Y
Sbjct: 532 ASDLLDEMYKRRLMITLKIYRALNASY 558
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 118/284 (41%), Gaps = 46/284 (16%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG-QYEKV- 185
E Y L++ + +KA + +M+ + TYN ++ LY K G YE +
Sbjct: 197 EANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALS 256
Query: 186 -----------PDVLT-------------EMKAKNIF-------PDNFSYRICINSYGAR 214
PD++T +A +F P++ +Y I+ Y
Sbjct: 257 VQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDATPNHVTYTTLIDGYCRL 316
Query: 215 SDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
+DL+ + EME+Q P +V TY S + I A+ +L + E+ + D
Sbjct: 317 NDLDQALRLREEMEAQGLYPTVV----TYNSILRKLCEIGRIRDANKLLNEMSEKKIEPD 372
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
+ N LI+ Y +G+ L++ + A + Y ++ K+ E + A+++L
Sbjct: 373 NVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLL 432
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL---EDLVEKG 372
+G S + ++ GYCN QN EA+L ++ V KG
Sbjct: 433 SMLDAGFSPSYCTYSWLVDGYCNQ---QNEEAVLKLPDEFVRKG 473
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 119/301 (39%), Gaps = 31/301 (10%)
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL---------------IDKA 256
G R L ++L + + W Y A ++AN+ ++KA
Sbjct: 160 GFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKA 219
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLE 315
++L + E + D YN LISLY G E L + D +E+ K I Y +++
Sbjct: 220 DNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDI-VTYNSLIH 278
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKAT 375
K G EA ++ KE + ++ T +I GYC + A + E++ +G
Sbjct: 279 GFCKEGRMREAMRLFKEIRDATPNHVTY--TTLIDGYCRLNDLDQALRLREEMEAQGLYP 336
Query: 376 TPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS---KLGDEGS 432
T ++ + + G+ + + + K +PD ++++ K+GD S
Sbjct: 337 TVVTYNSILRKLCEIGRIRDANKLLNE-----MSEKKIEPDNVTCNTLINAYCKIGDMKS 391
Query: 433 VQDVEAFV--AALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
V+ + A L+ + + H F K IR G ELL SM G T L
Sbjct: 392 ALKVKNRMVEAGLKLDQFTYKALIHGFCK--IREMDGAKELLLSMLDAGFSPSYCTYSWL 449
Query: 491 V 491
V
Sbjct: 450 V 450
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 171/407 (42%), Gaps = 18/407 (4%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--K 125
++ L K R +A +V + M + C ++ +D + + A+ F + +
Sbjct: 342 LMDGLCKGDRLQEAQQVLETMEDRN-CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVR 400
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
E TY +L++ + D AL +M G +TYN ++ KTG+ +
Sbjct: 401 GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEA 460
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
+ +MKAK PD +Y I + ++ + +M Q ++ D T+++
Sbjct: 461 NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA-VLPDVVTFSTLVE 519
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTACKR 304
Y A L+D A +L++ D Y L+ + +G E R L + K C+
Sbjct: 520 GYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQP 579
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+ Y +++A + G+ A ++L+E +G + ++I G+C G ++ A I
Sbjct: 580 NV-VTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKI 638
Query: 365 LEDLVEKGKATTPNSWA--VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
LE L E+ + + +A V+ G G+ + ++A ++ G P + +
Sbjct: 639 LERL-ERDENCKADMFAYRVMMDGLCRTGRMSAALELLEA-----IKQSGTPPRHDIYVA 692
Query: 423 ILSKL--GDE-GSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK 466
++ L G E G +V + R P N + Y A I+ R G+
Sbjct: 693 LIRGLCQGKELGKAMEVLEEMTLSRKSRP-NAEAYEAVIQELAREGR 738
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 150/360 (41%), Gaps = 19/360 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L K R +A M +KG V + V ++ +VH A +K+
Sbjct: 132 MIDGLCKANRLPEATTYFAKMKKKGT-VPNEWTYNVLINGFCKVHKVHRAYLLLKEMKES 190
Query: 128 --EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
TY +++ + RQ + D A FR+M E G + +TYN ++ + G ++
Sbjct: 191 GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEA 250
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
++L EM+ + + PD FSY + ++ M + + E S D Y++
Sbjct: 251 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKID-MALKVFEDNSNGDCPPDVVAYSTLIA 309
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKR 304
KA +D+A + +K E + D + + L+ E ++ + +E C
Sbjct: 310 GLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP 369
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+ Y ++++ L K G+ +A++V K + G + N++I G+C V +A +
Sbjct: 370 NV-ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 428
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGK---TERGFQCMKAALSVYVEGKGWKPDPKVIT 421
+E++ G ++ + G G+ R F MKA +P VIT
Sbjct: 429 MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFC----------NPDVIT 478
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 191/452 (42%), Gaps = 48/452 (10%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAES------YF 121
+I+ L K +A E+ + M G P A + + +H A + YF
Sbjct: 65 VIQGLCKSGDLDKACELLEEMRESG-----PVPDAAIYNFV--IHALCKARNTAKALDYF 117
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
++ + EK T+ +++ + + +A ++F KMK+ G + TYN ++ + K +
Sbjct: 118 RSM-ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHK 176
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWS 238
+ +L EMK + P+ +Y I+ + ++ ++ + R+M P++V
Sbjct: 177 VHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLV---- 232
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DL 297
TY + + L+D+A ++L + ER Q D Y+ L++ G L+++ D
Sbjct: 233 TYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN 292
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
C + Y T++ L K G +EA K+ ++ + D A++ G C
Sbjct: 293 SNGDCPPDVVA-YSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDR 351
Query: 358 VQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
+Q A+ +LE + ++ TPN +++ + G G+ + K + +G +P
Sbjct: 352 LQEAQQVLETMEDRN--CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIV-----RGIEP 404
Query: 416 DPKVITSILSKL----GDEGSVQDVEAFVA--ALRTVIPMNRQMYHAFIKANIRNGKG-- 467
+ S++ G + ++ +E A L +I Y+ I + G+
Sbjct: 405 NVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII-----TYNTLIDGLCKTGRAPE 459
Query: 468 VDELLDSMKADGIDEDEETKEILV---CTMEK 496
+ L MKA + D T L+ C +E+
Sbjct: 460 ANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 491
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 138/322 (42%), Gaps = 18/322 (5%)
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
D Y TY L +R R+ D+ + GI + TY ++ K+G +K
Sbjct: 21 DHNVY-TYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKAC 79
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYG-ARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
++L EM+ PD Y I++ AR+ + ++ R ME + +++ W+
Sbjct: 80 ELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDY-FRSMECEKNVI-TWTIMIDG-- 135
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV-LRLWDLEKTACKR 304
KAN + +A+ K +++ + YN LI+ + + L L +++++
Sbjct: 136 -LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAP 194
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+ Y T++ + + + A K+ ++ +G + N ++ G C NGL+ A +
Sbjct: 195 NV-VTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 253
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI--TS 422
L+++ E+G S+ + AG GK + AL V+ + P V+ ++
Sbjct: 254 LDEMRERGLQPDKFSYDTLMAGLCKTGKID-------MALKVFEDNSNGDCPPDVVAYST 306
Query: 423 ILSKLGDEGSVQDVEAFVAALR 444
+++ L G + + +R
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMR 328
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 7/209 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L++ + + + +A ++M + G + +TY ++ + + G+ +L EM
Sbjct: 548 TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEM 607
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P+ +YR I + DLE IL +E + D Y +
Sbjct: 608 VGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGR 667
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYAS---LGNKSEVLRLWDLEKTACKRYINRD 309
+ A ++L+ ++ Y LI LG EVL L + + R
Sbjct: 668 MSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKS--RPNAEA 725
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGN 338
Y +++ L + G HEEA + EL GN
Sbjct: 726 YEAVIQELAREGRHEEANALAD--ELLGN 752
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 147/352 (41%), Gaps = 25/352 (7%)
Query: 130 TYQTYGALLNCYVRQRQT-DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
T TY +LN Y + K MK G+A TYN ++ + YE+ +V
Sbjct: 254 TLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEV 313
Query: 189 LTEMKAKNIFPDNFSYRICINSYG-ARSDLEGMEIILREMESQ---PHIVLDWSTYASAA 244
EMKA PD +Y ++ YG +R E ME +L+EME+ P IV TY S
Sbjct: 314 FEEMKAAGFSPDKVTYNALLDVYGKSRRPREAME-VLKEMEASGFAPSIV----TYNSLI 368
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA-CK 303
Y + L+D+A ++ + ++ + D Y L+S + G +++++ + A C+
Sbjct: 369 SAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQ 428
Query: 304 RYINRDYITMLEALMKL----GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
I AL+K+ G E KV +E ++ D N ++ + NG+
Sbjct: 429 -----PNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDS 483
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
+ +++ G +++ + + Y G ++ + L G PD
Sbjct: 484 EVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDA-----GVTPDLST 538
Query: 420 ITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDEL 471
++L+ L G + E +A ++ ++ + + NGK V+ +
Sbjct: 539 YNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERM 590
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 10/273 (3%)
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYG--ALLNCYVRQRQTDKALSHFRKMKE 159
AV + ++G+ A S +L++D Y +L+ Y + +A+ F+K++E
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248
Query: 160 MGIALSTLTYNDIMCLYSKTGQ-YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
G + +TYN I+ +Y K G + K+ ++ MK+ + PD ++Y I+S S E
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYE 308
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+ EM++ D TY + Y K+ +A +VLK+ E + YN L
Sbjct: 309 EAAEVFEEMKAA-GFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSL 367
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWEL 335
IS YA G E + +L+ K+ I D Y T+L K G+ + A KV +E +
Sbjct: 368 ISAYARDGLLDEAM---ELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV 424
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
+G + NA+I + N G + E++
Sbjct: 425 AGCQPNICTFNALIKMHGNRGNFVEMMKVFEEI 457
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 133/319 (41%), Gaps = 12/319 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ Y R D+A++ +R+M + G+ TYN ++ ++ G +E+ VL EM
Sbjct: 503 TFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEM 562
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
K P+ +Y +++Y ++E M + E+ S +P VL + Y K
Sbjct: 563 KDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVL----LKTLVLVYSK 618
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
++L+ + + E+ D N ++S+Y S+ + + K +
Sbjct: 619 SDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTT 678
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ + E++E +L+E G D N VI YC NG ++ A I ++
Sbjct: 679 YNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK 738
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+ G A ++ A Y +K Y+ KP+ S++
Sbjct: 739 DFGLAPDVITYNTFIASYASDSMFIEAIDVVK-----YMIKNECKPNQNTYNSLIDWFCK 793
Query: 430 EGSVQDVEAFVAALRTVIP 448
+ +F++ LR + P
Sbjct: 794 LNRRDEANSFISNLRNLDP 812
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 12/310 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ R ++A F +MK G + +TYN ++ +Y K+ + + +VL EM
Sbjct: 293 TYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEM 352
Query: 193 KAKNIFPDNFSYRICINSYGARSDL--EGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+A P +Y I++Y AR L E ME L+ + I D TY + + K
Sbjct: 353 EASGFAPSIVTYNSLISAY-ARDGLLDEAME--LKSQMVKKGIKPDVFTYTTLLSGFEKT 409
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-RD 309
D A V ++ Q + +N LI ++ + GN E++++++ E C+ +
Sbjct: 410 GKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFE-EIKICECVPDIVT 468
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ T+L + G E V KE + +G + N +I Y G A AI ++
Sbjct: 469 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRML 528
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+ G +++ V A G E+ + L+ +G+ KP+ S+L +
Sbjct: 529 DAGVTPDLSTYNAVLAALARGGLWEQS----EKVLAEMKDGR-CKPNELTYCSLLHAYAN 583
Query: 430 EGSVQDVEAF 439
V+ + A
Sbjct: 584 GKEVERMSAL 593
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 144/363 (39%), Gaps = 35/363 (9%)
Query: 61 RVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRV--HGFLSAE 118
RV + + ++ ++ R + A+ S ++ G+C D AV L L+G V GF
Sbjct: 199 RVDDARELVEEMLHRGMAANAITYSALVD--GLCKCERLDEAVAL-LLGEVTRRGFTPDI 255
Query: 119 SYFSNLKDD-------------------EKTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
+S + D T TY +L+ Y R D+A+ KM +
Sbjct: 256 VTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 315
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
A +TY +M + K G+ + ++ +M A + PD ++ ++ +E
Sbjct: 316 DNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 375
Query: 220 MEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
+L E+ + P I TY Y K+N + KA +++ R + + YN
Sbjct: 376 ALELLEEITRRGCPPTIY----TYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYN 431
Query: 277 FLISLYASLGNKSEVLRLWDL---EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEW 333
L++ G + L+ D E C + Y +L+AL + G ++A + +E
Sbjct: 432 ILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAM-YAIILDALCRDGRTDDAVQFYEEM 490
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
G V+ C Q A +LE++++ G P + V + Y AG
Sbjct: 491 IQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMI 550
Query: 394 ERG 396
++
Sbjct: 551 QKA 553
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 141/370 (38%), Gaps = 53/370 (14%)
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
R + AL +R+M + LTY ++ SK G+ VL EM + PDN
Sbjct: 127 RAGRLRHALGVYRQMNDAHPP-DFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNT 185
Query: 203 SYRICINS----------------------------YGARSDL--------EGMEIILRE 226
+ + + S Y A D E + ++L E
Sbjct: 186 TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGE 245
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
+ ++ D TY++ KA + A D+ EE I YN LI Y G
Sbjct: 246 V-TRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF---EEMSCAPTAITYNSLIGGYCRAG 301
Query: 287 NKSEVLRLWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
+ E +RL ++ I Y T++ A K+G ++A ++ ++ + S D
Sbjct: 302 DMDEAIRLLGKMVDDNCAPDVIT--YTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVT 359
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
+++ G C G +++A +LE++ +G T ++ V GY + + + + L
Sbjct: 360 FTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEE-----L 414
Query: 405 SVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT---VIPMNRQMYHAFIKAN 461
+G+ P+ +++ G ++ L + P + MY + A
Sbjct: 415 VADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDAL 474
Query: 462 IRNGKGVDEL 471
R+G+ D +
Sbjct: 475 CRDGRTDDAV 484
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 154/366 (42%), Gaps = 17/366 (4%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY 131
+R R +V D M ++ I A +G G SA +++ +
Sbjct: 118 MRAHGRVGDMAQVFDLMQKQ-IVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSL 176
Query: 132 Q--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
TY L+ V+ +A+ ++ M E GI+ S TY+ +M + K + V +L
Sbjct: 177 NGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLL 236
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHF 246
EM+A+ + P+ +SY ICI G + + IL +ME +P +V T+
Sbjct: 237 NEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVV----THTVVIQV 292
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
A + A DV K + ++ D + Y L+ G+ V+ +W+
Sbjct: 293 LCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDN 352
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y +++AL ++G +EA V E + G S + N++I G+ + A +
Sbjct: 353 IVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFN 412
Query: 367 DLVEKGKATTPNSWA-VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+ G +PN + V+ Y+ GK+ + + ++ +++ KG PD ++LS
Sbjct: 413 HMNACGP--SPNGYTHVLFINYY--GKSGQSLKAIQR--YEHMKSKGIVPDVAAANAVLS 466
Query: 426 KLGDEG 431
L G
Sbjct: 467 SLARSG 472
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 184/470 (39%), Gaps = 69/470 (14%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNW---VKNGNKVRVGELQRIIRDLRKRKRFSQALEV 84
++ T +++ G+ G + ++ W V +G + ++ L + R +AL V
Sbjct: 317 DRVTYITLLDKCGDSGDS-QSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAV 375
Query: 85 SDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQ 144
D M KGI S E Y +Y +L++ +++
Sbjct: 376 FDEMKEKGI----------------------SPEQY------------SYNSLISGFLKA 401
Query: 145 RQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSY 204
D+AL F M G + + T+ + Y K+GQ K MK+K I PD +
Sbjct: 402 DMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAA 461
Query: 205 RICINSYGARSDLEGME----IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVL 260
++S ARS GM L++M P D TY KA+ D+A +
Sbjct: 462 NAVLSSL-ARSGRLGMAKRVFYELKDMGVSP----DTITYTMMIKCCSKASKADEAMNFF 516
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKL 320
E D + N LI G +E +L+ K N Y T+L L +
Sbjct: 517 SDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGRE 576
Query: 321 GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
G+ +E +L+E S + + N V+ NG V A +L + EKG +S+
Sbjct: 577 GKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSY 636
Query: 381 AVVAAGYFDAGKTERGFQ--C-MKAALSVYVEGKGWKPDPKVITSILSKLGDEG----SV 433
V G + E F+ C MK L+ PD + +IL G ++
Sbjct: 637 NTVMYGLIKEERFEEAFRMFCQMKKILA---------PDYATLCTILPSFVKNGLMKEAL 687
Query: 434 QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD---ELLDSMKADGI 480
V+ ++ L+ ++ +H+ ++ I N GV+ E +++ + GI
Sbjct: 688 HTVKEYI--LKADCNTDKSSFHSLMEG-ILNKAGVEKSIEFAENIASRGI 734
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 136/332 (40%), Gaps = 44/332 (13%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L+ + ++ +A F K K +G++L T +YN ++ + D+ TEMK
Sbjct: 744 LIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLG 803
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
PD F+Y + +++ G +E M + EM + Y S Y+ N I
Sbjct: 804 CGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRK--------GYEST---YVTYNTI--I 850
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
S ++K +RLEQ + YN + ++ T C Y +L+
Sbjct: 851 SGLVKS--KRLEQAIDLYYNLMSEGFSP---------------TPCT------YGPLLDG 887
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
L+K G+ +AE + E G + I N ++ G+ G +N I E +VE+G
Sbjct: 888 LLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPD 947
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV 436
S+ V+ AG+ G + L + G +PD + ++ LG +++
Sbjct: 948 IKSYTVLIDTLCTAGRLNDGLSYFRQLLEL-----GLEPDLIIYNLLIDGLGKSERIEEA 1002
Query: 437 EAFVAALRT--VIPMNRQMYHAFIKANIRNGK 466
++ ++P N Y++ I + GK
Sbjct: 1003 VCLFNEMKKKGIVP-NLYTYNSLILHLGKAGK 1033
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 126/313 (40%), Gaps = 12/313 (3%)
Query: 57 GNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG---RVHG 113
G ++ G +IR L A ++ M R G C + + LD +G R+
Sbjct: 768 GVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLG-CGPDEFTYNLILDAMGKSMRIEE 826
Query: 114 FLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
L ++ K E TY TY +++ V+ ++ ++A+ + + G + + TY ++
Sbjct: 827 MLRVQAEMHR-KGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLL 885
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
K G+ ++ EM P+ Y I +N + + E + I +M Q I
Sbjct: 886 DGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQ-GI 944
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
D +Y A ++ ++ E + D I YN LI LG +
Sbjct: 945 NPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLID---GLGKSERIEE 1001
Query: 294 LWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
L K+ I + Y +++ L K G+ EA ++ +E + G + NA+I
Sbjct: 1002 AVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIR 1061
Query: 351 GYCNNGLVQNAEA 363
GY +G NA A
Sbjct: 1062 GYSVSGSTDNAYA 1074
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 160/428 (37%), Gaps = 62/428 (14%)
Query: 53 WVKN-----GNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDL 107
W+ N G K V IR L + RF +A ++ M G C H V + +
Sbjct: 234 WLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSG-CKPDVVTHTVVIQV 292
Query: 108 IGRVHGFLSAESYFSNLK--DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
+ A+ F +K D + TY LL+ + + + M G +
Sbjct: 293 LCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDN 352
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
++Y ++ + G+ ++ V EMK K I P+ +SY I+
Sbjct: 353 IVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISG--------------- 397
Query: 226 EMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
++KA++ D+A ++ +G + I+ Y
Sbjct: 398 ---------------------FLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKS 436
Query: 286 GNKSEVLRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
G + ++ ++ K+ + I D +L +L + G A++V E + G S DT
Sbjct: 437 GQSLKAIQRYEHMKS---KGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDT 493
Query: 343 RIPNAVIIGYCNNGL-VQNAEAILEDLVEKGKATTPNSWAV--VAAGYFDAGKTERGFQC 399
I ++I C+ A D+VE G P+ A+ + + GK ++
Sbjct: 494 -ITYTMMIKCCSKASKADEAMNFFSDMVETG--CVPDVLALNSLIDTLYKGGKGNEAWKL 550
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFI 458
+ +E P ++LS LG EG V++V + + ++ P N Y+ +
Sbjct: 551 FHQLKEMKIE-----PTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVL 605
Query: 459 KANIRNGK 466
+NG+
Sbjct: 606 DCLSKNGE 613
>gi|413917024|gb|AFW56956.1| hypothetical protein ZEAMMB73_276172 [Zea mays]
Length = 666
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
G LL C + + + HF+K +++G+ L + YN M Y K G + +LTEM A
Sbjct: 372 GYLLQCLKKLGMISEVIVHFQKFRDLGLHLDGVLYNIAMDAYCKLGNMNEAVKLLTEMMA 431
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
+ PD Y IN Y + ++E + +M + ++ D TY A Y + +
Sbjct: 432 GGLVPDKIHYTCLINGYCLKGEMENAWQVFEQMLKE-NVKPDVVTYNILASGYSRNGTVI 490
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITML 314
K D+L+ + + + + Y I+ + GN SE L+++ + I Y +M+
Sbjct: 491 KVYDLLEHMMNQGLEPNSLTYGVAITSFCRGGNLSEAEVLFNIVEEKGIDNIELLYSSMV 550
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
+ G + A + GN D + +I G C + V+ A + ++EK
Sbjct: 551 CGYLHSGWTDHAHALFLRVAKQGNMVDQFSCSKLINGLCIDEKVEEASTVCSMMLEKNVI 610
Query: 375 TTPNSWAVVAAGY 387
S++ + + Y
Sbjct: 611 PDVISYSKLISAY 623
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 74/388 (19%), Positives = 160/388 (41%), Gaps = 32/388 (8%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD---- 187
Q+ ++ + + +++ + +M EMG+ Y+ + G+Y+ +
Sbjct: 223 QSLNIVIRSFFEVNKAEESFQVWVRMIEMGMKPDAHGYSSFIIGLCDCGKYDLAYNMVSK 282
Query: 188 --VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
VL E+ + + ++ +Y + I+ LE E +L +++++ D Y+
Sbjct: 283 YTVLHEITQERVAIESIAYNMVIDGLCKEMKLEEAEKVL-DIKTRHGSTPDLYGYSYLIR 341
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
Y K ++K ++ + + +L+ LG SEV+ + +
Sbjct: 342 SYCKMGNLEKVWHYIEAMVSHGIEINCYIVGYLLQCLKKLGMISEVIVHFQKFRDLGLHL 401
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y ++A KLG EA K+L E G D +I GYC G ++NA +
Sbjct: 402 DGVLYNIAMDAYCKLGNMNEAVKLLTEMMAGGLVPDKIHYTCLINGYCLKGEMENAWQVF 461
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP----KVIT 421
E ++++ ++ ++A+GY G + + ++ ++ +G +P+ IT
Sbjct: 462 EQMLKENVKPDVVTYNILASGYSRNGTVIKVYDLLEHMMN-----QGLEPNSLTYGVAIT 516
Query: 422 S-----------ILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHA---FIKANIRNGKG 467
S +L + +E + ++E +++ + HA F++ + G
Sbjct: 517 SFCRGGNLSEAEVLFNIVEEKGIDNIELLYSSMVCGYLHSGWTDHAHALFLRVA-KQGNM 575
Query: 468 VDELLDSMKADGIDEDEETKEI-LVCTM 494
VD+ S +G+ DE+ +E VC+M
Sbjct: 576 VDQFSCSKLINGLCIDEKVEEASTVCSM 603
>gi|428179975|gb|EKX48844.1| hypothetical protein GUITHDRAFT_68401 [Guillardia theta CCMP2712]
Length = 396
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 144/349 (41%), Gaps = 13/349 (3%)
Query: 96 FAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSH 153
F H L L+ R A SY + +K D Y ++ Y + + A +
Sbjct: 12 FTCTQHLKALALLRRPD---QAYSYLTRMKSDGIMPNVWAYTTCIDAYCKVGDMEMAENI 68
Query: 154 FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGA 213
M GI + T+ +M Y+K G +E + L M+ +NI D++ I I+S+
Sbjct: 69 KSMMISSGIEPTLATFTTLMKGYAKYGNHEALEHYLEIMQQENIMIDSYIVSILIDSFVN 128
Query: 214 RSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGI 273
+ D+E E ILRE E++ +L YAS Y + +ID+ ++++ + + + +
Sbjct: 129 KGDMERAEAILREKEAEDPSLLSSHLYASLIKGYGRKGMIDRCMALMEEMKSKQLKVSAV 188
Query: 274 GYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEW 333
YN LIS + + + + A + Y ++ G +A+ +
Sbjct: 189 PYNTLISALLESKRMDQAQKTLEQMEEAGIQPSVVTYTLLIHEFSSAGNVAQAQAAFETM 248
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF----- 388
E SG DT NA++ GY + G + I L++ + +++++
Sbjct: 249 ERSGIFPDTGAYNALLDGYASLGQTARMKEIFWKLMQSANKPSIETYSIMIKCLLHSDAS 308
Query: 389 -DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV 436
DA K+E +CM + + + KP S++S G QD
Sbjct: 309 DDAKKSENLRECM--SFLDQIREENLKPSASFFNSLISACTLFGKPQDT 355
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 131/334 (39%), Gaps = 46/334 (13%)
Query: 109 GRVHGFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
G++H A +++ +++D T +TY L+ + +ALS F +M+E G +
Sbjct: 269 GKLH---EALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNV 325
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
TY ++ K G+ ++ +L EM K + P + I SY R +E +L
Sbjct: 326 YTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGL 385
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
MES+ + + TY + + +D+A +L K E D + YN
Sbjct: 386 MESK-KVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYN---------- 434
Query: 287 NKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
T++ L ++G + A ++ + G S D N
Sbjct: 435 -------------------------TLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFN 469
Query: 347 AVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSV 406
A ++ C G V A ILE L EK +++ + GY AGK E K L+
Sbjct: 470 AFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLA- 528
Query: 407 YVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
+ P+ ++ L EG VQD V
Sbjct: 529 ----EECLPNSITFNVMIDGLRKEGKVQDAMLLV 558
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 156/369 (42%), Gaps = 26/369 (7%)
Query: 115 LSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI 172
L A S F +++ E TY L++ ++ + D+AL +M E G+A S + +N +
Sbjct: 307 LEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNAL 366
Query: 173 MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR--ICINSYGARSDLEGMEIILREMESQ 230
+ Y K G E VL M++K + P+ +Y IC G D M ++ + +ES+
Sbjct: 367 IGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMD-RAMALLNKMVESK 425
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG-----YNFLISLYASL 285
+ D TY + H + ++D AS + RL +DG +N + +
Sbjct: 426 --LSPDVVTYNTLIHGLCEVGVVDSASRLF-----RLMIRDGFSPDQWTFNAFMVCLCRM 478
Query: 286 GNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
G E ++ + K + Y +++ K G+ E A + K ++
Sbjct: 479 GRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITF 538
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
N +I G G VQ+A ++ED+ + T +++ ++ +R + + +S
Sbjct: 539 NVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLIS 598
Query: 406 VYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG 465
G++P+ T+ + +G +++ E V ++ + +FI + N
Sbjct: 599 -----SGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKN----EGVLLDSFIYNLLINA 649
Query: 466 KGVDELLDS 474
G LLDS
Sbjct: 650 YGCMGLLDS 658
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/282 (18%), Positives = 115/282 (40%), Gaps = 29/282 (10%)
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
D + T TY L+ +++ D+A ++ G + +TY + Y G+ E+
Sbjct: 565 DVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEA 624
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYAS 242
+++ ++K + + D+F Y + IN+YG L+ +LR M +P + TY+
Sbjct: 625 EEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEP----SYLTYS- 679
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS--------LYASLGNKSEVLRL 294
+K +I+K + E + +G + ++ +++ + +
Sbjct: 680 ---ILMKHLVIEK---------HKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLF 727
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
+ + C +N Y ++ L K+G A + G S I N+++ C
Sbjct: 728 EKMAECGCVPNLN-TYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCK 786
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G+ A +L+ ++E S+ ++ G F+ E+
Sbjct: 787 LGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKA 828
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 100/280 (35%), Gaps = 30/280 (10%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY A + Y Q + ++A K+K G+ L + YN ++ Y G + VL M
Sbjct: 607 TYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRM 666
Query: 193 KAKNIFPDNFSYRICI-------------NSYGARSDLE---------------GMEIIL 224
P +Y I + N G L G+ +L
Sbjct: 667 FGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVL 726
Query: 225 REMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
E ++ V + +TY+ + K ++ A + E I +N L+S
Sbjct: 727 FEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCK 786
Query: 285 LGNKSEVLRLWDLEKTACKRYINRD-YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
LG E + L D C + + Y ++ L + E+AE V G +YD
Sbjct: 787 LGMFGEAVTLLD-SMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEV 845
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
+I G G V +L + + G P +++++
Sbjct: 846 AWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSML 885
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 8/251 (3%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY +++ + +T A+ +M++ G + + TYN I+ + + ++ +L
Sbjct: 111 TVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKML 170
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM + FPD +Y I ++ L M P +V +Y + + K
Sbjct: 171 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVV----SYTTVINGLCK 226
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINR 308
+ +D AS +L R D + Y+ LI + G + L D + K C+ +
Sbjct: 227 SGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 286
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++L AL +LG +AE +L E E G + D NA I G C V+ A+A+ + +
Sbjct: 287 -YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRM 345
Query: 369 VEKGKATTPNS 379
VE+G TPN+
Sbjct: 346 VERG--CTPNA 354
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 129/316 (40%), Gaps = 20/316 (6%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E TY LL R+ + DKA + F++M + T+ ++ ++ Q EK
Sbjct: 4 EHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARK 63
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
+L MK PD+ Y I+ Y D L EM + H + TY +
Sbjct: 64 LLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM-VKNHCLPTVVTYTNIVDGL 122
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
KA A +L + ++ + YN ++ E ++ LE+ A + Y
Sbjct: 123 CKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKM--LEEMAVRGYFP 180
Query: 308 R--DYITMLEALMKLGEHEEAEKVLKEWELSGN--SYDTRIPNAVIIGYCNNGLVQNAEA 363
Y + ++ L K +EA K L ++ + SY T VI G C +G + +A
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTT-----VINGLCKSGDLDSASR 235
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
+L+ + +G +++ + G+ G+ ER + + L + G +P+ S+
Sbjct: 236 MLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKL-----GCRPNMVAYNSL 290
Query: 424 LS---KLGDEGSVQDV 436
L +LG G +D+
Sbjct: 291 LGALHRLGHIGKAEDM 306
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 110/283 (38%), Gaps = 44/283 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L++ + + + ++A+ M ++G + + YN ++ + G K D+L EM
Sbjct: 251 TYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEM 310
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---------ESQPHIVLDWSTYASA 243
+ + PD SY CI+ ++ + + M S +++D Y
Sbjct: 311 ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVL 370
Query: 244 AHFYIKANLIDKASDVLKKA-EERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKT 300
K D+A + K +E++ + D YN ++ + + L++ LEK
Sbjct: 371 LDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKN 430
Query: 301 ACK-------------------------RYINRDYI-------TMLEALMKLGEHEEAEK 328
C ++ +I T+++A+ K G+ A +
Sbjct: 431 CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALE 490
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+ +E G D +A+I G + + + A + LVE+
Sbjct: 491 LFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVER 533
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 132/330 (40%), Gaps = 18/330 (5%)
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
MG + TYN ++ ++ +++K V EM K+ PD F++ I + + LE
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+L M+ + V D + Y + Y KA +A L + + + Y ++
Sbjct: 61 ARKLLGRMK-EMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIV 119
Query: 280 SLYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
+ ++L D + C I Y ++E L + + +EA+K+L+E + G
Sbjct: 120 DGLCKAERTRDAVKLLDEMRDKGCSPNI-YTYNVIVEGLCEERKLDEAKKMLEEMAVRGY 178
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERG 396
D N+ I G C V A L + TP+ S+ V G +G +
Sbjct: 179 FPDVVTYNSFIKGLCKCDRVDEARKFLARM-----PVTPDVVSYTTVINGLCKSGDLDSA 233
Query: 397 FQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV-AALRTVIPMNRQMYH 455
+ + ++ +G PD +S++ G V+ + + L+ N Y+
Sbjct: 234 SRMLD-----HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYN 288
Query: 456 AFIKANIRNGK--GVDELLDSMKADGIDED 483
+ + A R G +++L M+ G D
Sbjct: 289 SLLGALHRLGHIGKAEDMLVEMERRGFTPD 318
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/482 (21%), Positives = 185/482 (38%), Gaps = 61/482 (12%)
Query: 30 TTLYSIISPLGNPGTRIEPE--LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDW 87
T +++ LG G E L K G + V ++ KR + ++L + D
Sbjct: 564 VTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDE 623
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQR 145
M RKG CV +++ ++ + + A F +K++ E Y LL+ V+
Sbjct: 624 MVRKG-CVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDE 682
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
+ D AL F +++E + T YN ++ K+ + ++ ++ MK +NI PD F+Y
Sbjct: 683 KIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYT 742
Query: 206 ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
++ G LE + +M + H D Y S K + A + + +
Sbjct: 743 SLLDGLGKSGRLEEAFNMFTKMTEEGH-EPDVVAYTSLMDVLGKGGKLSHALIIFRAMAK 801
Query: 266 RLEQKDGIGYNFLI--------------------------------SLYASLGNKSEVLR 293
+ D + Y+ LI SL S G K V R
Sbjct: 802 KRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDR 861
Query: 294 LWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
+L + +R + +T +L L K G AEK+L+E E G D N +I
Sbjct: 862 ALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILID 921
Query: 351 GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG 410
G G+V AE+ + + EKG ++ + GK ++ + + L +E
Sbjct: 922 GVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESL---GKVDKLLEACE--LFDSMEE 976
Query: 411 KGWKPDPKVITSILSKLGDEGSVQDVEAF---------------VAALRTVIPMNRQMYH 455
+G+ P ++ LG G V + + ++ ++ + Q +H
Sbjct: 977 EGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQFH 1036
Query: 456 AF 457
A
Sbjct: 1037 AL 1038
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 151/366 (41%), Gaps = 11/366 (3%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY L++ + + D+A+S R+M++ G S +TY+ +M + K Q E+ +
Sbjct: 562 TVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLF 621
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYI 248
EM K D +Y + IN D+ + +++ R E +L Y + +
Sbjct: 622 DEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLL--GNYKTLLSSLV 679
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K ID A + + +E D YN +++ E +L D K
Sbjct: 680 KDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLF 739
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++L+ L K G EEA + + G+ D +++ G + +A I +
Sbjct: 740 TYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAM 799
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
+K +++ + G+ E + + ++S KG P+ V +S++ G
Sbjct: 800 AKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSIS-----KGCTPNVGVYSSLIDSFG 854
Query: 429 DEGSV-QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEE 485
+G V + +E F R P N Y+ + + G+ ++LL+ M+ G D
Sbjct: 855 KKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLV 914
Query: 486 TKEILV 491
T IL+
Sbjct: 915 TYNILI 920
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 126/297 (42%), Gaps = 12/297 (4%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
T+ L++ V+ D+A F MK + + + +TY ++ +K G+ E+ +V E
Sbjct: 323 HTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVE 382
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
MK N PD +Y I+ G + + + +EM+ + +V + TY KA
Sbjct: 383 MKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDR-GLVPNLRTYNIMISVLGKAG 441
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDY 310
+A + +E+ D YN LI + G +VL + ++ + + I+RD
Sbjct: 442 RQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDS 501
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
E G E A++ ++ L S N ++ + +NG V A +LE + +
Sbjct: 502 NAGHE-----GTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKK 556
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
T ++ + G AG+ + ++ +E +G +P +S+++
Sbjct: 557 HECIPTVVTYTTLVDGLGKAGRLDEAVSLLRE-----MEKQGCEPSVVTYSSLMASF 608
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 103/278 (37%), Gaps = 48/278 (17%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
+LL + AL F +MK G ST YN ++ L K G Y V ++
Sbjct: 222 SLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQF 281
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREM---------------------------- 227
I PD ++RI ++S+ L+ ++EM
Sbjct: 282 RIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEA 341
Query: 228 ----------ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
P++V TY + + KA +++A +V + +E D I YN
Sbjct: 342 CKFFNGMKNLRCSPNVV----TYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNT 397
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYIN---RDYITMLEALMKLGEHEEAEKVLKEWE 334
LI LG E L K R + R Y M+ L K G EA ++ + +
Sbjct: 398 LID---GLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLK 454
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
G D N +I G + AI++++VEKG
Sbjct: 455 EQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 125/311 (40%), Gaps = 16/311 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++ L K R +A EV M ++ C + +D +G+ A F +KD
Sbjct: 363 LVNGLAKAGRLEEACEVFVEM-KENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDR 421
Query: 128 E--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+TY +++ + + +A F +KE G TYN ++ + K GQ +KV
Sbjct: 422 GLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKV 481
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG-MEIILREME--SQPHIVLDWSTYAS 242
++ EM K CI S + + EG +E R +E S L TY +
Sbjct: 482 LAIIKEMVEKG--------GECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNT 533
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTA 301
+I +D+A +L+ ++ + Y L+ G E + L ++EK
Sbjct: 534 LMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQG 593
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
C+ + Y +++ + K + EE+ + E G D + VI C + V A
Sbjct: 594 CEPSV-VTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQA 652
Query: 362 EAILEDLVEKG 372
+ + E+G
Sbjct: 653 LDVFGRMKEEG 663
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 139/319 (43%), Gaps = 12/319 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L++ Y R D+A+ +++M E GI TYN ++ ++ G++E+ + EM
Sbjct: 467 TYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEM 526
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ PD SY +++Y L+ M+ + ++ ++ +W + N
Sbjct: 527 VDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKT----LVLVNNK 582
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
++ + K +E ++ + N L ++ + G V ++ ++ + IN
Sbjct: 583 VNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAAT 642
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ +LG+ E+ E +L E + SG D N VI Y G ++ A + ++
Sbjct: 643 YNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 702
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G ++ + Y E ++ Y+ +G +P+ + SIL
Sbjct: 703 CSGVKPDIVTYNIFIKSYVANIMFEEAIDLVR-----YLVTQGCRPNERTFNSILQGYSR 757
Query: 430 EGSVQDVEAFVAALRTVIP 448
G + + ++F++ L + P
Sbjct: 758 HGRMVEAKSFLSNLPKIYP 776
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 156/367 (42%), Gaps = 24/367 (6%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG-QYEKVPDVLT 190
Y AL++ + R + A++ F++M + G+ + +TYN + YSK +++V ++
Sbjct: 185 SAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVD 244
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFY 247
MK I D ++Y I+ R + EM++ +P D T+ S Y
Sbjct: 245 SMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEP----DKVTFNSLLDVY 300
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTACKRYI 306
KA ++A VLK+ E + YN LIS Y G E L L ++E K +
Sbjct: 301 GKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 360
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y T++ L ++G+ + A E +G S + NA+I + G A+ +
Sbjct: 361 V-TYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFD 419
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAG---KTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
DL G +W + + + G + F+ MK A G+ P+ S+
Sbjct: 420 DLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKA--------GYIPERDTYVSL 471
Query: 424 LSKLGDEGSV-QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDE 482
+S G Q +E + + I + Y+A + A R G+ E + + A+ +D
Sbjct: 472 ISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRW--EQAEKLFAEMVDR 529
Query: 483 DEETKEI 489
D + E+
Sbjct: 530 DCKPDEL 536
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 119/268 (44%), Gaps = 11/268 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +LL+ Y + R+ ++A+ ++M+ G S +TYN ++ Y K G E+ ++ EM
Sbjct: 292 TFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEM 351
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+ + + PD +Y I+ ++ EM P++ TY + +
Sbjct: 352 EFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLC----TYNALIKLHGV 407
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI-NR 308
+ V D + +N L+S++ G SEV ++ K A YI R
Sbjct: 408 RGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAG--YIPER 465
Query: 309 D-YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
D Y++++ + + G ++A ++ K +G D NAV+ G + AE + +
Sbjct: 466 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAE 525
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTER 395
+V++ S++ + Y +A K ++
Sbjct: 526 MVDRDCKPDELSYSSLLHAYANAKKLDK 553
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 119/279 (42%), Gaps = 9/279 (3%)
Query: 123 NLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
++K+D E+ TY L++C R+ +A F +MK G +T+N ++ +Y K
Sbjct: 245 SMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKAR 304
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDW 237
++E+ VL M+ P +Y I++Y LE + +EME +P +V
Sbjct: 305 KHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV--- 361
Query: 238 STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
TY + + ID A + + YN LI L+ G +E++ ++D
Sbjct: 362 -TYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDD 420
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
++A + T+L + G E V KE + +G + ++I Y GL
Sbjct: 421 LRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 480
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
A I + ++E G +++ V + G+ E+
Sbjct: 481 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQA 519
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 122 SNLKDDEKTYQ------------TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+NL + EK +Q A+++ Y + + K M E I S TY
Sbjct: 584 NNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATY 643
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N +M +YS+ G EK +LTE+K+ + PD +SY I +YG + ++ + EM+
Sbjct: 644 NSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC 703
Query: 230 ---QPHIVLDWSTYASAAHFYIKANLIDKASDVLK 261
+P IV TY Y+ + ++A D+++
Sbjct: 704 SGVKPDIV----TYNIFIKSYVANIMFEEAIDLVR 734
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 16/270 (5%)
Query: 109 GRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
GRV L AE+ + ++ + TYG ++N + TD AL+ RKM E I
Sbjct: 24 GRV---LEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRKMDESHIKADV 80
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN---SYGARSDLEGMEII 223
+ Y I+ K G + K ++ TEM K IFP+ +Y I+ SYG +D E +
Sbjct: 81 VIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRD 140
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
+ E P +V T+ + + ++K I +A ++ ++ R D I YN LI +
Sbjct: 141 MIESNVDPDVV----TFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFC 196
Query: 284 SLGNKSEVLRLWDL--EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+ ++DL K I + T++ + ++ K+L E G D
Sbjct: 197 KHSRLDDAKHIFDLMVSKGGSPNVITIN--TLIGGCCRAKRVDDGIKLLHEMLRRGLVPD 254
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+ N +I G+C G + A+ + ++++ +
Sbjct: 255 SVSYNTLIHGFCQAGDLNAAQDLFQEMISQ 284
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 131/299 (43%), Gaps = 18/299 (6%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
M E G + +N +M + G+ + ++ M P+ +Y +N D
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60
Query: 217 LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
+ +LR+M+ + HI D Y + K KA ++ + ++ + + YN
Sbjct: 61 TDSALNLLRKMD-ESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYN 119
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEW 333
+I S G ++ +L + + ++ D +T ++ A +K G+ EAE++ +E
Sbjct: 120 CMIDGCCSYGKWTDAEQLL---RDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREM 176
Query: 334 ELSGNSY-DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
L N + DT N++I G+C + + +A+ I + +V KG + + + G A +
Sbjct: 177 -LGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKR 235
Query: 393 TERGFQCMKAALSVYVEGKGWKPDPKVITSIL---SKLGDEGSVQDV-EAFVAALRTVI 447
+ G + + L +G PD +++ + GD + QD+ + ++ +R ++
Sbjct: 236 VDDGIKLLHEMLR-----RGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQVRWIL 289
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 10/159 (6%)
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G +D N ++ G C G V AEA+++ +VE G ++ + G G T+
Sbjct: 5 GCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSA 64
Query: 397 FQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMY 454
++ ++ K D + T+I+ +L +G + + + + P N Y
Sbjct: 65 LNLLRKMDESHI-----KADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFP-NVLTY 118
Query: 455 HAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
+ I GK D +LL M +D D T L+
Sbjct: 119 NCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALI 157
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L++ + + + D A F M G + + +T N ++ + + + +L EM
Sbjct: 187 TYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEM 246
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVL 235
+ + PD+ SY I+ + DL + + +EM SQ +L
Sbjct: 247 LRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQVRWIL 289
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 195/471 (41%), Gaps = 61/471 (12%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I RK +ALE M G+ H + + G+L + + LK
Sbjct: 380 LIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTI-------IQGWLKGQKHEEALKLF 432
Query: 128 EKTYQTYGALLNCYV---------RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
+++++T L N +V +Q +TD+A KM+ GI + ++YN++M + +
Sbjct: 433 DESFET--GLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCR 490
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
+ V + + K + P+N++Y I I+ D + ++ M S +I ++
Sbjct: 491 QKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSS-NIEVNGV 549
Query: 239 TYASAAHFYIKANLIDKASDVLKKA-EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
Y + + K KA ++L EE+ + YN +I + G + ++
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYE- 608
Query: 298 EKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
C I+ + IT ++ L K ++A ++ E + G D A+I G+C
Sbjct: 609 --EMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCK 666
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT-----------ERGFQC---- 399
+++A A+ +L+E+G + + + +G+ + G + G +C
Sbjct: 667 RSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT 726
Query: 400 ---------------MKAALSVYVEGKGWKPDPKVITSILSKLGDEGS-VQDVEAFVAAL 443
+ + L ++ G PD + T I++ L +G V+ V+ F
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMK 786
Query: 444 RTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETKEILV 491
+ + N +Y+A I + R G +DE L D M GI D T +ILV
Sbjct: 787 KNNVTPNVLIYNAVIAGHYREGN-LDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 24/324 (7%)
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKM-KEMGIALSTLTYNDIMCLYSKTG 180
SN++ + YQT ++N + QT KA M +E + +S ++YN I+ + K G
Sbjct: 542 SNIEVNGVVYQT---IINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG 598
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ + EM I P+ +Y +N + ++ + EM+++ + LD Y
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK-GVKLDIPAY 657
Query: 241 ASAAHFYIKANLIDKASDVLKKA-EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
+ + K + ++ AS + + EE L I YN LIS + +LGN L DL K
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPI-YNSLISGFRNLGNMVAAL---DLYK 713
Query: 300 TACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
K + D Y T+++ L+K G A ++ E + G D I ++ G G
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773
Query: 357 LVQNAEAILEDLVEKGKATTPNS--WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
+ E++ K TPN + V AG++ G + F+ L KG
Sbjct: 774 QFVKVVKMFEEM--KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLD-----KGIL 826
Query: 415 PDPKVITSILSKLGDEGSVQDVEA 438
PD ++S G G++Q V A
Sbjct: 827 PDGATFDILVS--GQVGNLQPVRA 848
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 131/304 (43%), Gaps = 30/304 (9%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
+L+ + + AL F KM++ G + +++T++ ++ + K G+ EK + +M+
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403
Query: 196 NIFPDNFSYRICINSY--GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ P F I + G + + E +++ E+ V +T S + K
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHE-EALKLFDESFETGLANVFVCNTILS---WLCKQGKT 459
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI------- 306
D+A+++L K E R GIG N + LG+ + + DL + +
Sbjct: 460 DEATELLSKMESR-----GIGPNVVSYNNVMLGHCRQ--KNMDLARIVFSNILEKGLKPN 512
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
N Y +++ + + + A +V+ S + + +I G C G A +L
Sbjct: 513 NYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLA 572
Query: 367 DLVEKGK-ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSI 423
+++E+ + + S+ + G+F G+ M +A++ Y E G G P+ TS+
Sbjct: 573 NMIEEKRLCVSCMSYNSIIDGFFKEGE-------MDSAVAAYEEMCGNGISPNVITYTSL 625
Query: 424 LSKL 427
++ L
Sbjct: 626 MNGL 629
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 119/304 (39%), Gaps = 51/304 (16%)
Query: 117 AESYFSNLKDDEKTY------QTYGALLNCYVRQRQTDKALSHFRKMKEMGI-------- 162
A S L D K++ + + LLN Y + RQTD A+ +M E+ +
Sbjct: 143 ASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVN 202
Query: 163 -ALSTLTYNDIMC----LYSK-----------TGQY-------EKVP----DVLTEMKAK 195
LS L + + LYS+ T Q E+ P +VL+ +
Sbjct: 203 RTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIER 262
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
PD+ Y + + + DL +LREM+ + V TY S +K +D
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD- 321
Query: 256 ASDVLKKAEERLEQKDGIGYNF-----LISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
D ++ +E L DGI N LI+ + + L L+D + + +
Sbjct: 322 --DAIRLKDEML--SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTF 377
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++E K GE E+A + K+ E+ G + + +I G+ + A + ++ E
Sbjct: 378 SVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 437
Query: 371 KGKA 374
G A
Sbjct: 438 TGLA 441
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 129/317 (40%), Gaps = 42/317 (13%)
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+ TY ++++ + R DKA + R+M G+ + TYN+++ YS TGQ+++ V
Sbjct: 254 FVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313
Query: 191 EMKAKNIFPDN-----------------------------------FSYRICINSYGARS 215
EM+ +I PD FSY I +N Y +
Sbjct: 314 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKG 373
Query: 216 DLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
L M + M I D T+ Y ++DKA + + + + D + Y
Sbjct: 374 CLVDMTDLFDLMLGD-GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 432
Query: 276 NFLISLYASLGNKSEVLRLWDL---EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
+I+ +G + + ++ + A +Y Y +++ G +A++++ E
Sbjct: 433 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA---YHCLIQGFCTHGSLLKAKELISE 489
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
+G D +++I C G V +A+ I + V G T ++++ GY GK
Sbjct: 490 IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGK 549
Query: 393 TERGFQCMKAALSVYVE 409
E+ + A +S +E
Sbjct: 550 MEKALRVFDAMVSAGIE 566
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 165/400 (41%), Gaps = 57/400 (14%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---C-----------L 175
T TY L++C R + + AL+ F ++ G+ ++ + N ++ C L
Sbjct: 110 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDIL 169
Query: 176 YSKTGQYEKVPDV---------------------LTEMKAKN---IFPDNFSYRICINSY 211
+T + VPDV L M A+ PD +Y I+ +
Sbjct: 170 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGF 229
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
D+ + +EM Q I D+ TY+S H KA +DKA L++ + +
Sbjct: 230 FKEGDVNKACDLFKEM-VQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEK 328
YN LI Y+S G E +R++ K + I D +T ++ +L K G+ +EA
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVF---KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 345
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
V + G + + ++ GY G + + + + ++ G A ++ V+ Y
Sbjct: 346 VFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYA 405
Query: 389 DAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRT 445
+ G ++ A+ ++ E + G KPD ++++ L G + D +E F +
Sbjct: 406 NCGMLDK-------AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 458
Query: 446 VIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
+ ++ YH I+ +G EL+ + +G+ D
Sbjct: 459 GVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLD 498
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 148/357 (41%), Gaps = 15/357 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+ Y DKA+ F +M++ G+ +TY ++ + G+ + + +M
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455
Query: 193 KAKNIFPDNFSYRICINSYGAR-SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
+ + PD ++Y I + S L+ E+I M + H LD ++S + K
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH--LDIVFFSSIINNLCKLG 513
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+ A ++ + Y+ L+ Y +G + LR++D +A + Y
Sbjct: 514 RVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYG 573
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T++ K+G +E + +E G T + N +I G G A+ ++ E
Sbjct: 574 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 633
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKLGD 429
G A ++ +V G F +C A+ ++ E + +IT ++++ +
Sbjct: 634 GIAMNKCTYNIVLRGLFKN-------RCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQ 686
Query: 430 EGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
V++ + A++ R+ + Y I I+ G + +++ SM+ G + D
Sbjct: 687 TRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 125/308 (40%), Gaps = 12/308 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +++ + ++ +KA F++M + GI +TY+ ++ K +K L +M
Sbjct: 221 AYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQM 280
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P+N++Y I Y + + + +EM I+ D T + K
Sbjct: 281 VNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH-SILPDVVTLSMLMGSLCKYGK 339
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL---EKTACKRYINRD 309
I +A DV + + + Y +++ YA+ G ++ L+DL + A Y
Sbjct: 340 IKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY---T 396
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ +++A G ++A + E G D VI C G + +A ++
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
++G A ++ + G+ G + + + ++ G D +SI++ L
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN-----NGMHLDIVFFSSIINNLCK 511
Query: 430 EGSVQDVE 437
G V D +
Sbjct: 512 LGRVMDAQ 519
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/270 (18%), Positives = 108/270 (40%), Gaps = 1/270 (0%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+K +Y +LN Y + F M GIA T+N ++ Y+ G +
Sbjct: 352 MKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLD 411
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
K + EM+ + PD +YR I + ++ +M Q + D Y
Sbjct: 412 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ-GVAPDKYAYHCL 470
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
+ + KA +++ + D + ++ +I+ LG + ++DL
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
Y +++ +G+ E+A +V +G + + ++ GYC G + +
Sbjct: 531 HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLS 590
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
+ ++++KG + + ++ G F+AG+T
Sbjct: 591 LFREMLQKGIKPSTILYNIIIDGLFEAGRT 620
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 7/223 (3%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T Y L++ Y + +KAL F M GI + + Y ++ Y K G+ ++ +
Sbjct: 533 TAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLF 592
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM K I P Y I I+ ++ EM ++ I ++ TY K
Sbjct: 593 REMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM-TESGIAMNKCTYNIVLRGLFK 651
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
D+A + K+ + + I N +I A + V DL + + +
Sbjct: 652 NRCFDEAIFLFKELRAMNVKINIITLNTMI---AGMFQTRRVEEAKDLFASISRSGLVPC 708
Query: 310 YIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+T M+ L+K G EEAE + + +G D+R+ N V+
Sbjct: 709 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 72/166 (43%), Gaps = 7/166 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L + R D+A+ F++++ M + ++ +T N ++ +T + E+ D+ +
Sbjct: 641 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASI 700
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ P +Y I I + +E E + M++ +P D +K
Sbjct: 701 SRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP----DSRLLNHVVRELLK 756
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
N I +A L K +ER + + L+ L++S G E +R
Sbjct: 757 KNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 12/297 (4%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY L+ R ++ KA R++ + G+ +TYN ++ + K GQ ++
Sbjct: 406 RTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNS 465
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M + + PD F++ I+ LE IL M + I LD T+ + + K
Sbjct: 466 MNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM-VKKGISLDEVTFTALIDGHCK-- 522
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
I KA DV E +E + + +LG ++ + K + +
Sbjct: 523 -IGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVV 581
Query: 312 T---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
T ++E + GE + K+L+ + +G S + +I G CNNG V+ AE IL +
Sbjct: 582 THTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSM 641
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
G + ++AV+ + AG+ +R FQ + + G +P+ + +++LS
Sbjct: 642 SSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK-----NGCQPNSHIYSALLS 693
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/376 (19%), Positives = 143/376 (38%), Gaps = 38/376 (10%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K + + +TY L+ TDKA+ +M + TY ++ + G+ E+
Sbjct: 294 KGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEE 353
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYA 241
V +M + P ++ IN Y + +L ME +P+I TY
Sbjct: 354 ANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNI----RTYN 409
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
+ + KA +L++ + D + YN L+ + G + +++ +A
Sbjct: 410 ELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSA 469
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
+ +++ L KLG E+A +L G S D A+I G+C G ++
Sbjct: 470 GLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDV 529
Query: 362 EAILEDLVEKGKATTPNSW------------------------------AVVAAGYFDAG 391
+ E++VE TT +++ +VV G
Sbjct: 530 CFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEG 589
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMN 450
G + + ++ G P+ T I++ L + G V++ E + ++ + + N
Sbjct: 590 HCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPN 649
Query: 451 RQMYHAFIKANIRNGK 466
Y +KA+++ G+
Sbjct: 650 HFTYAVLVKAHVKAGR 665
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 148/370 (40%), Gaps = 28/370 (7%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+Y Y LL C + A +R+M G L + Y ++ K G +
Sbjct: 158 SYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQA----- 212
Query: 190 TEMKAKNIFPDNFSY--RICINSYGA---RSDLEGMEIILREMESQPHIVLDWSTYASAA 244
EM + F +C + A R DL + +M + + + TY+
Sbjct: 213 AEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILI 272
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACK 303
H +A +++A + ++ E+ Q Y LI +G + +++ D + AC
Sbjct: 273 HGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACV 332
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
++ Y +++ L + G+ EEA V ++ G NA+I GYC G V +A
Sbjct: 333 PNVH-TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQ 391
Query: 364 ILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAAL-----------SVYVEG 410
+L ++EKG PN ++ + G K+ + F ++ + ++ V+G
Sbjct: 392 LL-SVMEKGNC-KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 449
Query: 411 KGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-QMYHAFIKANIRNGKGVD 469
+ + +I + + G D F A + + + R + + + + ++ G +D
Sbjct: 450 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 509
Query: 470 ELLDSMKADG 479
E+ + DG
Sbjct: 510 EVTFTALIDG 519
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/456 (20%), Positives = 182/456 (39%), Gaps = 28/456 (6%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
D VK+G +I L R +A+++ + M +KGI P + + L+
Sbjct: 260 FDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGI---EPTVYTYTIPLVS 316
Query: 110 RVHGFLSAES--YFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
S+E+ +K QT+ AL++ R + + A+ + KM G+ +
Sbjct: 317 LCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPT 376
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
T+TYN ++ G++E + M + P +Y I + D++ +I
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436
Query: 226 EM---ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+M S P+++ TY + + Y K ++ A +L+ + + D Y LIS +
Sbjct: 437 KMLKAGSSPNVI----TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492
Query: 283 ASLGNKSEVLRLW--DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
+ G L+ +E ++ Y +++ L + ++A + + SGN
Sbjct: 493 SRGGKLEHATSLFYGMMEHGISPNHVT--YTAIIDGYFNLAKVDDALALFWKMVESGNLP 550
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCM 400
++ N +I G+ + AE +V++G ++ G G+T F+
Sbjct: 551 SSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIF 610
Query: 401 KAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV---IPMNRQMYHAF 457
+E + + P+ +S++ L EG +D E + R N Y
Sbjct: 611 HE-----MEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTL 665
Query: 458 IKANIRNGKG--VDELLDSMKADGIDEDEETKEILV 491
+K G+ D+L+ SM+ G+ EE L+
Sbjct: 666 VKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 147/371 (39%), Gaps = 44/371 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+ + R D A + F +M + G +++TY+ ++ G+ E+ D+L EM
Sbjct: 239 TYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEM 298
Query: 193 KAKNIFPDNFSYRICINSY-GARSDLEGMEII--LREMESQPHIVLDWSTYASAAHFYIK 249
K I P ++Y I + S A E +E++ +++ P+I T+ + +
Sbjct: 299 VQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI----QTFTALISGLSR 354
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ A + K + YN LI+ G ++ + +
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ +G+ ++A + + +G+S + N +I GYC G + NA +LE +
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLE--I 472
Query: 370 EKGKATTPNSWAV--VAAGYFDAGK-----------TERGFQCMKAALSVYVEGK----- 411
KG P++W + +G+ GK E G + ++G
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Query: 412 -------GWK-------PDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYH 455
WK P + ++S S+ + E F + + ++P N Y
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLP-NVITYT 591
Query: 456 AFIKANIRNGK 466
+FI RNG+
Sbjct: 592 SFIDGLCRNGR 602
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 162/425 (38%), Gaps = 61/425 (14%)
Query: 95 VFAPCDHAVQLDL--------IGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQ 146
+FAP DH L + + RV FLS ++ D T ++ LL +
Sbjct: 126 LFAPADHVRILMIKSCRNEGEVKRVTQFLSE---INSKYDFGYTLCSFTTLLIQLGKFDM 182
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
D A + KM GI S LT+N ++ + K G+ ++ +++ + + +P+ F+Y
Sbjct: 183 VDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTS 242
Query: 207 CINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
I + +L+ + M P+ V TY++ + +++A D+L++
Sbjct: 243 LILGHCRNHNLDLAFAMFDRMVKDGCDPNSV----TYSTLINGLCSEGRLEEAMDMLEEM 298
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYI----------NRD--- 309
++ + Y + G SE + L ++K C I +RD
Sbjct: 299 VQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF 358
Query: 310 ---------------------YITMLEALMKLGEHEEAEKVLKEWELS-GNSYDTRIPNA 347
Y ++ L G E A + K W LS G+ T+ N
Sbjct: 359 EIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFK-WMLSHGSLPSTQTYNE 417
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
+I +C G +Q A I + +++ G + ++ + GY G + ++
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEI----- 472
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEA-FVAALRTVIPMNRQMYHAFIKANIRNGK 466
++G G KPD T ++S G ++ + F + I N Y A I K
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Query: 467 GVDEL 471
D L
Sbjct: 533 VDDAL 537
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 1/269 (0%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T + Y +L++ Y R D+ALS RKMKE GI +S +TY+ I+ +SK G E
Sbjct: 341 TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF 400
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
E K + + Y I ++ ++E E ++REME + I + Y + Y
Sbjct: 401 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEG-IDAPIAIYHTMMDGYTM 459
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
K V K+ +E + Y LI+LY +G S+ L + + K ++ +
Sbjct: 460 VADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 519
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y M+ +KL + A V ++ G D + N +I +C G + A ++++
Sbjct: 520 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 579
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ T ++ + GY +G R +
Sbjct: 580 KLRHRPTTRTFMPIIHGYAKSGDMRRSLE 608
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 23/226 (10%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD- 126
II K ++LEV D M R G CV P H G ++G + ++
Sbjct: 593 IIHGYAKSGDMRRSLEVFDMMRRCG-CV--PTVHTFN----GLINGLVEKRQMEKAVEIL 645
Query: 127 DEKTY-------QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
DE T TY ++ Y T KA +F +++ G+ + TY ++ K+
Sbjct: 646 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKS 705
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
G+ + V EM A+NI ++F Y I I+ + R D+ ++++M+ + + D T
Sbjct: 706 GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG-VKPDIHT 764
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
Y S +I A KA D + +A + +E+ + +G I Y +L
Sbjct: 765 YTS----FISA--CSKAGD-MNRATQTIEEMEALGVKPNIKTYTTL 803
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 128/278 (46%), Gaps = 14/278 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+N YV++R+ +A + +M GI +T+TYN ++ + K + + + M
Sbjct: 321 TYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVM 380
Query: 193 KAKNIFPDNFSYRICINSY-GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K PD F++ I+ Y GA+ +G E +L EM ++ +V D +TY + H +
Sbjct: 381 ATKGCSPDVFTFNTLIDGYCGAKRIDDGTE-LLHEM-TETGLVADTTTYNTLIHGFCLVG 438
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW--------DLEKTACK 303
++ A D+ ++ D + N L+ G + L ++ DL+ +
Sbjct: 439 DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPF 498
Query: 304 RYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
+ D Y ++ L+ G+ EAE++ KE G +T +++I G C +
Sbjct: 499 NGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDE 558
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
A + + + K + ++ + +GY AG+ + G +
Sbjct: 559 ATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLE 596
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 162/409 (39%), Gaps = 56/409 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MC--------------- 174
T+ L+N R+ + +A++ +M E G+ + +TY I MC
Sbjct: 180 TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKM 239
Query: 175 -----------LYS-------KTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
+YS K G++ ++ TEM+ K IFPD F+Y I+ + +
Sbjct: 240 EEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGR 299
Query: 217 LEGMEIILREM---ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGI 273
+ +L+EM + P++V TY++ + Y+K +A ++ + R + I
Sbjct: 300 WSEAQRLLQEMLERKINPNVV----TYSALINAYVKERKFFEAEELYDEMLPRGIIPNTI 355
Query: 274 GYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEW 333
YN +I + ++ + T + T+++ ++ ++L E
Sbjct: 356 TYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEM 415
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
+G DT N +I G+C G + A + + ++ G + + G D GK
Sbjct: 416 TETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 475
Query: 394 ERGFQCMKAA------LSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RT 445
+ + KA L G +PD + ++S L +EG + E + R
Sbjct: 476 KDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRG 535
Query: 446 VIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETKEILV 491
++P N Y + I + + +DE + DSM + D T LV
Sbjct: 536 IVP-NTITYSSMINGLCKQSR-LDEATQMFDSMGSKSFSPDVVTFNTLV 582
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 152/373 (40%), Gaps = 30/373 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ + + +A ++M E I + +TY+ ++ Y K ++ + ++ EM
Sbjct: 286 TYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEM 345
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ I P+ +Y I+ + ++ L+ E + M ++ D T+ + Y A
Sbjct: 346 LPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATK-GCSPDVFTFNTLIDGYCGAKR 404
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI- 311
ID +++L + E D YN LI + +G+ + L DL + + D +
Sbjct: 405 IDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAAL---DLSQQMISSGVCPDIVT 461
Query: 312 --TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP-----------NAVIIGYCNNGLV 358
T+L+ L G+ ++A ++ K + S D P N +I G N G
Sbjct: 462 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKF 521
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
AE + +++ +G +++ + G + + Q + S K + PD
Sbjct: 522 LEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGS-----KSFSPDVV 576
Query: 419 VITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMY----HAFIKANIRNGKGVDELLD 473
+++S G V D +E F R I + Y H F K + N G ++
Sbjct: 577 TFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRK--VGNINGALDIFQ 634
Query: 474 SMKADGIDEDEET 486
M + G+ D T
Sbjct: 635 EMISSGVYPDTIT 647
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 133/345 (38%), Gaps = 54/345 (15%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--KDDEKTY 131
K ++F +A E+ D M +GI + + +D + + +AE F + K
Sbjct: 331 KERKFFEAEELYDEMLPRGI-IPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDV 389
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
T+ L++ Y ++ D +M E G+ T TYN ++ + G D+ +
Sbjct: 390 FTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQ 449
Query: 192 MKAKNIFPDNFSYR-----ICINSY-------------------------GARSDLEGME 221
M + + PD + +C N G D++
Sbjct: 450 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYN 509
Query: 222 IILREM-------------ESQPH--IVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
I++ + + PH IV + TY+S + K + +D+A+ + +
Sbjct: 510 ILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK 569
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEH 323
D + +N L+S Y G + L L+ +R I D YIT++ K+G
Sbjct: 570 SFSPDVVTFNTLVSGYCKAGRVDDGLELF---CEMGRRGIVADAITYITLIHGFRKVGNI 626
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
A + +E SG DT +++ + ++ A A+LEDL
Sbjct: 627 NGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/267 (19%), Positives = 110/267 (41%), Gaps = 14/267 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L+ VR + D +S ++KM+ I ++N ++ + + ++
Sbjct: 80 FNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKIT 139
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
PD ++ ++ + + +M +P++V T+ + + + +
Sbjct: 140 KLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM-CRPNVV----TFTTLMNGLCREGRV 194
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---Y 310
+A +L + E Q + I Y ++ +G+ L L L K +I + Y
Sbjct: 195 VEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNL--LRKMEEMSHIKPNVVIY 252
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+++ L K G H +A + E + G D N +I G+C++G A+ +L++++E
Sbjct: 253 SAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLE 312
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGF 397
+ PN V + +A ER F
Sbjct: 313 --RKINPN--VVTYSALINAYVKERKF 335
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 42 PGTRIEPELD--NWVKNG--NKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFA 97
P +EP++ N + +G N+ + E + + +++ R + S +N G+C +
Sbjct: 497 PFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMIN--GLCKQS 554
Query: 98 PCDHAVQL-DLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRK 156
D A Q+ D +G ++S+ ++ T+ L++ Y + + D L F +
Sbjct: 555 RLDEATQMFDSMG-------SKSFSPDV-------VTFNTLVSGYCKAGRVDDGLELFCE 600
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
M GI +TY ++ + K G D+ EM + ++PD + R + ++ +
Sbjct: 601 MGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEE 660
Query: 217 LEGMEIILREME 228
L+ +L +++
Sbjct: 661 LKRAVAMLEDLQ 672
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 1/269 (0%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T + Y +L++ Y R D+ALS RKMKE GI +S +TY+ I+ +SK G E
Sbjct: 343 TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF 402
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
E K + + Y I ++ ++E E ++REME + I + Y + Y
Sbjct: 403 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEG-IDAPIAIYHTMMDGYTM 461
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
K V K+ +E + Y LI+LY +G S+ L + + K ++ +
Sbjct: 462 VADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 521
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y M+ +KL + A V ++ G D + N +I +C G + A ++++
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ T ++ + GY +G R +
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 23/226 (10%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD- 126
II K ++LEV D M R G CV P H G ++G + ++
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCG-CV--PTVHTFN----GLINGLVEKRQMEKAVEIL 647
Query: 127 DEKTY-------QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
DE T TY ++ Y T KA +F +++ G+ + TY ++ K+
Sbjct: 648 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKS 707
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
G+ + V EM A+NI ++F Y I I+ + R D+ ++++M+ + + D T
Sbjct: 708 GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG-VKPDIHT 766
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
Y S +I A KA D + +A + +E+ + +G I Y +L
Sbjct: 767 YTS----FISA--CSKAGD-MNRATQTIEEMEALGVKPNIKTYTTL 805
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 12/297 (4%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY L+ R ++ KA R++ + G+ +TYN ++ + K GQ ++
Sbjct: 383 RTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNS 442
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M + + PD F++ I+ LE IL M + I LD T+ + + K
Sbjct: 443 MNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKG-ISLDEVTFTALIDGHCK-- 499
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
I KA DV E +E + + +LG ++ + K + +
Sbjct: 500 -IGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVV 558
Query: 312 T---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
T ++E + GE + K+L+ + +G S + +I G CNNG V+ AE IL +
Sbjct: 559 THTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSM 618
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
G + ++AV+ + AG+ +R FQ + + G +P+ + +++LS
Sbjct: 619 SSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK-----NGCQPNSHIYSALLS 670
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/376 (19%), Positives = 143/376 (38%), Gaps = 38/376 (10%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K + + +TY L+ TDKA+ +M + TY ++ + G+ E+
Sbjct: 271 KGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEE 330
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYA 241
V +M + P ++ IN Y + +L ME +P+I TY
Sbjct: 331 ANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNI----RTYN 386
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
+ + KA +L++ + D + YN L+ + G + +++ +A
Sbjct: 387 ELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSA 446
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
+ +++ L KLG E+A +L G S D A+I G+C G ++
Sbjct: 447 GLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDV 506
Query: 362 EAILEDLVEKGKATTPNSW------------------------------AVVAAGYFDAG 391
+ E++VE TT +++ +VV G
Sbjct: 507 CFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEG 566
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMN 450
G + + ++ G P+ T I++ L + G V++ E + ++ + + N
Sbjct: 567 HCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPN 626
Query: 451 RQMYHAFIKANIRNGK 466
Y +KA+++ G+
Sbjct: 627 HFTYAVLVKAHVKAGR 642
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 148/370 (40%), Gaps = 28/370 (7%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+Y Y LL C + A +R+M G L + Y ++ K G +
Sbjct: 135 SYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQA----- 189
Query: 190 TEMKAKNIFPDNFSY--RICINSYGA---RSDLEGMEIILREMESQPHIVLDWSTYASAA 244
EM + F +C + A R DL + +M + + + TY+
Sbjct: 190 AEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILI 249
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACK 303
H +A +++A + ++ E+ Q Y LI +G + +++ D + AC
Sbjct: 250 HGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACV 309
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
++ Y +++ L + G+ EEA V ++ G NA+I GYC G V +A
Sbjct: 310 PNVH-TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQ 368
Query: 364 ILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAAL-----------SVYVEG 410
+L ++EKG PN ++ + G K+ + F ++ + ++ V+G
Sbjct: 369 LL-SVMEKGNC-KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 426
Query: 411 KGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-QMYHAFIKANIRNGKGVD 469
+ + +I + + G D F A + + + R + + + + ++ G +D
Sbjct: 427 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 486
Query: 470 ELLDSMKADG 479
E+ + DG
Sbjct: 487 EVTFTALIDG 496
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 140/329 (42%), Gaps = 16/329 (4%)
Query: 121 FSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
F N+ ++ T T+ L+ + + ++A + KM + G+ S +T+ ++ + +
Sbjct: 510 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 569
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
G+ +L MK P+ ++Y I IN +E E IL M S + +
Sbjct: 570 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG-VSPNHF 628
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW--- 295
TYA ++KA +D+A ++ + Q + Y+ L+S + L N + R
Sbjct: 629 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFV-LSNTAIGARALSST 687
Query: 296 -DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
DL+ + N D + + +L + + A K+ E + G + + N +++G C
Sbjct: 688 GDLDARSLSSEEN-DNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTED-LYNFLVVGLCK 745
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
G + A+ + +D+V+ G + + + Y K + + MK L +
Sbjct: 746 EGRIIEADQLTQDMVKHG-LFPDKAISSIIEHYCKTCKYDNCLEFMKLVLD-----NKFV 799
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFVAAL 443
P ++ L +EG VQ+ + V+ L
Sbjct: 800 PSFASYCWVIHGLRNEGRVQEAQKLVSDL 828
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 153/371 (41%), Gaps = 11/371 (2%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
I+R L + QA+EV D M ++ C + + ++ R G A ++D
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRD-CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268
Query: 128 EKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
T TY L+N ++ + D+A+ M G + +T+N I+ TG++
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
+L +M K P ++ I IN + R L G I + E Q + +Y H
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILIN-FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKR 304
+ K +D+A + L++ R D + YN +++ G + + + + L C
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+ Y T+++ L K G+ +A K+L E DT ++++ G G V A
Sbjct: 448 VL-ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+ G ++ + G + +T+R + V++ +G KP+ T ++
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL-----VFMINRGCKPNETSYTILI 561
Query: 425 SKLGDEGSVQD 435
L EG ++
Sbjct: 562 EGLAYEGMAKE 572
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 158/385 (41%), Gaps = 24/385 (6%)
Query: 114 FLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
FL Y N+ D L+ + R +T KA ++ G +TYN ++
Sbjct: 124 FLENMVYHGNVPD----IIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPH 232
Y K G+ VL M ++ PD +Y + S L + ME++ R ++ +
Sbjct: 180 SGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
D TY + + + A +L + +R D + YN L++ G E +
Sbjct: 237 P--DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 293 R-LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
+ L D+ + C+ + I +L ++ G +AEK+L + G S N +I
Sbjct: 295 KFLNDMPSSGCQPNVITHNI-ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
C GL+ A ILE + + G S+ + G+ K +R + ++ +S +
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS-----R 408
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT-----VIPMNRQMYHAFIKANIRNGK 466
G PD ++L+ L +G V+D + L + V+ + KA + GK
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG-KTGK 467
Query: 467 GVDELLDSMKADGIDEDEETKEILV 491
+ +LLD M+A + D T LV
Sbjct: 468 AI-KLLDEMRAKDLKPDTITYSSLV 491
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 13/182 (7%)
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
L +++ GE EE K L+ GN D +I G+C G + A ILE L G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
++ V+ +GY AG+ + ALSV ++ PD +IL L D G +
Sbjct: 169 VPDVITYNVMISGYCKAGE-------INNALSV-LDRMSVSPDVVTYNTILRSLCDSGKL 220
Query: 434 -QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD---ELLDSMKADGIDEDEETKEI 489
Q +E L+ + Y I+A R+ GV +LLD M+ G D T +
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRD-SGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 490 LV 491
LV
Sbjct: 280 LV 281
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 24/233 (10%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y LL+ + ++++ D+A+ + +M G +TYN ++ K G+ E ++L ++
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEI-ILREMESQPHIVLDWSTYASAAHFYIKAN 251
+K P +Y I+ A++ G I +L EM ++ + D TY+S +
Sbjct: 441 SSKGCSPVLITYNTVIDGL-AKAGKTGKAIKLLDEMRAK-DLKPDTITYSSLVGGLSREG 498
Query: 252 LIDKASDVLKKAEERLEQKDGIGYN-FLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+D+A + E + + + +N ++ L S + L + CK Y
Sbjct: 499 KVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPN-ETSY 557
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
++E L G +EA ++L E CN GL++ + A
Sbjct: 558 TILIEGLAYEGMAKEALELLNEL-------------------CNKGLMKKSSA 591
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 153/365 (41%), Gaps = 9/365 (2%)
Query: 109 GRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLT 168
GRV L+ SN T+ L+N + A+ M + G T
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
YN ++ K G+ ++ +VL +M ++ P+ +Y I++ + +E + R +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
S+ I+ D T+ S A ++ ++ + + D YN LI S G
Sbjct: 393 SK-GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 289 SEVLR-LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
E L L +E + C R + Y T+++ K + EAE++ E E+ G S ++ N
Sbjct: 452 DEALNMLKQMELSGCARSV-ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
+I G C + V++A +++ ++ +G+ ++ + + G ++ ++A S
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS-- 568
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK 466
G +PD +++S L G V+ + +++ I + Y+ I+ R K
Sbjct: 569 ---NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRK 625
Query: 467 GVDEL 471
+ +
Sbjct: 626 TTEAI 630
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 117/280 (41%), Gaps = 1/280 (0%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
+D TY L++ ++ Q ++A R + GI T+N ++ T +
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
++ EM++K PD F+Y + I+S ++ L+ +L++ME TY +
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVITYNTLI 477
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
+ KAN +A ++ + E ++ + YN LI + +L D ++
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y ++L + G+ ++A +++ +G D +I G C G V+ A +
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
L + KG TP+++ V G F KT + L
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 140/360 (38%), Gaps = 41/360 (11%)
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+SH KM GI T+N ++ + Q +L +M + + PD ++ +
Sbjct: 175 ISH-AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQG 233
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYA--SAAHFYIKANLIDKASDVLKKAEERLE 268
Y DL+G LR E WS + H + K ++ A + +++ +
Sbjct: 234 YIEEGDLDGA---LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE----MS 286
Query: 269 QKDGI-----GYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEH 323
+DG +N L++ G+ + + D+ Y +++ L KLGE
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
+EA +VL + S +T N +I C V+ A + L KG ++ +
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 384 AAGYFDAGKTERGFQCM----KAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVE 437
G C+ + A+ ++ E KG +PD ++ L +G + +
Sbjct: 407 IQGL-----------CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 438 AFVAAL------RTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
+ + R+VI N + F KAN + +E+ D M+ G+ + T L+
Sbjct: 456 NMLKQMELSGCARSVITYN-TLIDGFCKAN--KTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/280 (18%), Positives = 119/280 (42%), Gaps = 30/280 (10%)
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
Y +I+ ++G ++ + +L +MK+ ++ I I SY E++
Sbjct: 86 YEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQ-----------FELQ 134
Query: 229 SQPHIVLDWST----YASAAHFYIKA--NLIDKAS-DVLKKAEERLE----QKDGIGYNF 277
+ V+DW HFY + L+D S +++ + ++ + D +N
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 278 LI-SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
LI +L + + +L L D+ + + T+++ ++ G+ + A ++ ++
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPD-EKTFTTVMQGYIEEGDLDGALRIREQMVEF 253
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV-EKGKATTPNSWAVVAAGYFDAGKTER 395
G S+ N ++ G+C G V++A ++++ + G ++ + G AG +
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
+ M L +G+ PD S++S L G V++
Sbjct: 314 AIEIMDVMLQ-----EGYDPDVYTYNSVISGLCKLGEVKE 348
>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 151/363 (41%), Gaps = 29/363 (7%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L+N + + D A++ +R +K +G+ + TY + + G +E+ DV EM+
Sbjct: 198 LMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAG 257
Query: 197 IFPDNFSYRICINSYGA--RSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
+ P+ + I + RSDL G E LR + + + +D Y + + +
Sbjct: 258 VNPNAVTCSTYIEGLCSHKRSDL-GYEA-LRALRA-ANWPIDTFAYTAVIRGFCSEMKLK 314
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYI------N 307
+A DV DG Y LI Y GN + + L D+ K +
Sbjct: 315 EAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEF 374
Query: 308 RD---------YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
RD Y +++AL KLG+ EEA ++L E + S D +I GYC G +
Sbjct: 375 RDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKL 434
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
+A+ + E++ E+G ++ ++ G+ G + + + + +G KP+
Sbjct: 435 VDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDC-----IGTQGLKPNSA 489
Query: 419 VITSILSKLGDEGSVQDVEAFVAALRTVIPMN-RQMYHAFIKANIRNGKGVDELLDSMKA 477
I+ L G V++ EAF+ L N M + KAN + EL +
Sbjct: 490 THNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFT--RKAYELFSRLSK 547
Query: 478 DGI 480
GI
Sbjct: 548 QGI 550
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 139/359 (38%), Gaps = 100/359 (27%)
Query: 134 YGALLNCYVRQRQTDKALS----------------HFRKMKEMGIALSTLTYNDIMCLYS 177
YGAL++ Y + +A++ F++ ++ GI L + YN ++
Sbjct: 335 YGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALC 394
Query: 178 KTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDW 237
K G+ E+ ++L EMK + + D Y I Y
Sbjct: 395 KLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYC------------------------- 429
Query: 238 STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
++ L+D A ++ ++ +ER + D + YN L+ ++ G K E L L D
Sbjct: 430 ----------LQGKLVD-AKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDC 478
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE------------------LSGNS 339
T + + + ++E L G+ +EAE L E + +
Sbjct: 479 IGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKA 538
Query: 340 YD--TRI--------------PNAVIIG-----YCNNGLVQNAEAILEDLVEKGKATTPN 378
Y+ +R+ PN ++ G +C +G ++ A+ + + LVE+G
Sbjct: 539 YELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVI 598
Query: 379 SWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSILSKLGDEGSVQD 435
++ ++ GY C++ A ++ ++ +G KPD T +L ++QD
Sbjct: 599 TYTMMINGYCRV-------NCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQD 650
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 93/219 (42%), Gaps = 35/219 (15%)
Query: 80 QALEVSDWMNRKGICVFAPCDHAV--QLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGAL 137
+ALE+ D + +G+ + + + L + G+V AE++ + L+D K + Y A+
Sbjct: 471 EALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVK---EAEAFLNTLED--KCLENYSAM 525
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI 197
++ Y + T KA F ++ + GI M A ++
Sbjct: 526 VDGYCKANFTRKAYELFSRLSKQGI---------------------------LRMLALDV 558
Query: 198 FPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKAS 257
P+ Y I ++ D++ +++ +M + I D TY + Y + N + +A
Sbjct: 559 EPNQIMYGKLIGAFCRDGDMKRAQLVF-DMLVERGITPDVITYTMMINGYCRVNCLREAR 617
Query: 258 DVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
D+ +ER + D I Y ++ ++ N + + L+D
Sbjct: 618 DIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYD 656
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
D E YG L+ + R +A F + E GI +TY ++ Y + +
Sbjct: 557 DVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREA 616
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIV 234
D+ +MK + I PD +Y + ++ + ++L+ + EM + QP IV
Sbjct: 617 RDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIV 668
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++N Y R +A F MKE GI +TY ++ +SKT + ++ EM
Sbjct: 599 TYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEM 658
Query: 193 KAKNIFPDNFSY 204
A+ + PD +Y
Sbjct: 659 IARGLQPDIVTY 670
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 1/269 (0%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T + Y +L++ Y R D+ALS RKMKE GI +S +TY+ I+ +SK G E
Sbjct: 343 TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF 402
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
E K + + Y I ++ ++E E ++REME + I + Y + Y
Sbjct: 403 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEE-GIDAPIAIYHTMMDGYTM 461
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
K V K+ +E + Y LI+LY +G S+ L + + K ++ +
Sbjct: 462 VADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 521
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y M+ +KL + A V ++ G D + N +I +C G + A ++++
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ T ++ + GY +G R +
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
II K ++LEV D M R G CV P H G ++G + L D
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCG-CV--PTVHTFN----GLINGLVEKRQAVEIL--D 645
Query: 128 EKTY-------QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
E T TY ++ Y T KA +F +++ G+ + TY ++ K+G
Sbjct: 646 EMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSG 705
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ + V EM A+NI ++F Y I I+ + R D+ ++++M+ + + D TY
Sbjct: 706 RMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKE-GVKPDIHTY 764
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
S +I A KA D + +A + +E+ + +G I Y +L
Sbjct: 765 TS----FISA--CSKAGD-MNRATQTIEEMEALGVKPNIKTYTTL 802
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 74/375 (19%), Positives = 148/375 (39%), Gaps = 32/375 (8%)
Query: 77 RFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY---FSNLKDDEKTYQT 133
+ S+ALEVS M +G+ H ++ + ++GF+ + + F+ +D K
Sbjct: 499 KISKALEVSRVMKEEGV------KHNLKTYSM-MINGFVKLKDWANAFAVFEDMVKEGMK 551
Query: 134 -----YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
Y +++ + D+A+ ++M+++ +T T+ I+ Y+K+G + +V
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
M+ P ++ IN G + +E IL EM + + + TY Y
Sbjct: 612 FDMMRRCGCVPTVHTFNGLIN--GLVEKRQAVE-ILDEM-TLAGVSANEHTYTKIMQGYA 667
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
KA + + + D Y L+ G L + K R I R
Sbjct: 668 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL---AVTKEMSARNIPR 724
Query: 309 D---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+ Y +++ + G+ EA ++++ + G D + I G + A +
Sbjct: 725 NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI 784
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
E++ G ++ + G+ A E+ C + ++ G KPD V +L+
Sbjct: 785 EEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEE-----MKAMGIKPDKAVYHCLLT 839
Query: 426 KLGDEGSVQDVEAFV 440
L S+ EA++
Sbjct: 840 SLLSRASI--AEAYI 852
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 195/490 (39%), Gaps = 62/490 (12%)
Query: 35 IISPLGNPGT--RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKG 92
IIS LG G + D G V +I + ++ +LE+ + M R+
Sbjct: 154 IISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRER 213
Query: 93 I--------CVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQ 144
+ V C LD G + F AE ++ D TY T LL+ +
Sbjct: 214 VSPNILTYNTVINACARG-DLDWEGLLGLF--AEMRHEGVQPDLVTYNT---LLSACAAR 267
Query: 145 RQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSY 204
D+A F+ M E GI TY+ I+ + K G+ EKV +L EM+++ PD SY
Sbjct: 268 GLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSY 327
Query: 205 RICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE 264
+ I ++ ++ + ++M++ V + STY+ + Y K D ++ + +
Sbjct: 328 NVLIEAHAKLGSIKEAMDVFKQMQA-AGCVPNASTYSILLNLYGKHGRYDDVRELFLQMK 386
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEH 323
E + D YN LI ++ G EV+ L+ DL + Y ++ A K G H
Sbjct: 387 ESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNM-ETYEGLVFACGKGGLH 445
Query: 324 EEAEKVL-----KEWELSGNSYDTRIP------------------------------NAV 348
E+A+K+L K S +Y I N++
Sbjct: 446 EDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSL 505
Query: 349 IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYV 408
I + GL + EAIL + E G + S++ + GY +G+ E + V +
Sbjct: 506 IHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAF-----VEM 560
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKG 467
E + D + + +L G V + E F+ + I + Y + +NG+
Sbjct: 561 EKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRW 620
Query: 468 VD--ELLDSM 475
D ELLD M
Sbjct: 621 DDASELLDEM 630
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 159/405 (39%), Gaps = 56/405 (13%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K +E Y +LL R+ +K F +M G+ S +Y ++ Y + GQYE
Sbjct: 145 KPNEHIYTIIISLLG---REGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYET 201
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDL--EGMEIILREMES---QPH------- 232
++L MK + + P+ +Y IN+ AR DL EG+ + EM QP
Sbjct: 202 SLELLERMKRERVSPNILTYNTVINA-CARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTL 260
Query: 233 ------------------------IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
IV + +TY+ + K ++K + +LK+ E
Sbjct: 261 LSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGY 320
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
D YN LI +A LG+ E + ++ + A Y +L K G +++ +
Sbjct: 321 LPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRE 380
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ + + S D N +I + G + + DLV++ ++ + F
Sbjct: 381 LFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLV---F 437
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA------- 441
GK G + ++ GKG P K + ++ G + ++ D EA VA
Sbjct: 438 ACGKG--GLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYG-QAALYD-EALVAFNTMNEV 493
Query: 442 ALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEET 486
++ I + H F + + K + +L M+ GI + ++
Sbjct: 494 GSKSTIDTYNSLIHTFARGGLY--KEFEAILSRMREYGISRNAKS 536
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 87/238 (36%), Gaps = 39/238 (16%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ Y L+ Y + D+AL F M E+G + TYN ++ +++ G Y++ +L+
Sbjct: 465 KAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSR 524
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ I + S+ I Y E EME LD T Y A
Sbjct: 525 MREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKM-RCELDEQTLEGVLGVYCFAG 583
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--------------- 296
L+D++ + + + + Y ++++YA G + L D
Sbjct: 584 LVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIG 643
Query: 297 ----------------------LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
L C + R Y T+LEAL LG+ A +VL E
Sbjct: 644 QMIKGDYDDDSNWQMVEYVFDKLNAEGCG-FGMRFYNTLLEALWWLGQKGRAARVLTE 700
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/456 (20%), Positives = 182/456 (39%), Gaps = 28/456 (6%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
D VK+G +I L R +A+++ + M +KGI P + + L+
Sbjct: 260 FDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGI---EPTVYTYTIPLVS 316
Query: 110 RVHGFLSAES--YFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
S+E+ +K QT+ AL++ R + + A+ + KM G+ +
Sbjct: 317 LCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPT 376
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
T+TYN ++ G++E + M + P +Y I + D++ +I
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436
Query: 226 EM---ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+M S P+++ TY + + Y K ++ A +L+ + + D Y LIS +
Sbjct: 437 KMLKAGSSPNVI----TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492
Query: 283 ASLGNKSEVLRLW--DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
+ G L+ +E ++ Y +++ L + ++A + + SGN
Sbjct: 493 SRGGKLEHATSLFYGMMEHGISPNHVT--YTAIIDGYFNLAKVDDALALFWKMVESGNLP 550
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCM 400
++ N +I G+ + AE +V++G ++ G G+T F+
Sbjct: 551 SSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIF 610
Query: 401 KAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV---IPMNRQMYHAF 457
+E + + P+ +S++ L EG +D E + R N Y
Sbjct: 611 HE-----MEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTL 665
Query: 458 IKANIRNGKG--VDELLDSMKADGIDEDEETKEILV 491
+K G+ D+L+ SM+ G+ EE L+
Sbjct: 666 VKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 147/371 (39%), Gaps = 44/371 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+ + R D A + F +M + G +++TY+ ++ G+ E+ D+L EM
Sbjct: 239 TYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEM 298
Query: 193 KAKNIFPDNFSYRICINSY-GARSDLEGMEII--LREMESQPHIVLDWSTYASAAHFYIK 249
K I P ++Y I + S A E +E++ +++ P+I T+ + +
Sbjct: 299 VQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI----QTFTALISGLSR 354
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ A + K + YN LI+ G ++ + +
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ +G+ ++A + + +G+S + N +I GYC G + NA +LE +
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLE--I 472
Query: 370 EKGKATTPNSWAV--VAAGYFDAGK-----------TERGFQCMKAALSVYVEGK----- 411
KG P++W + +G+ GK E G + ++G
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Query: 412 -------GWK-------PDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYH 455
WK P + ++S S+ + E F + + ++P N Y
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLP-NVITYT 591
Query: 456 AFIKANIRNGK 466
+FI RNG+
Sbjct: 592 SFIDGLCRNGR 602
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 162/425 (38%), Gaps = 61/425 (14%)
Query: 95 VFAPCDHAVQLDL--------IGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQ 146
+FAP DH L + + RV FLS ++ D T ++ LL +
Sbjct: 126 LFAPADHVRILMIKSCRNEGEVKRVTQFLSE---INSKYDFGYTLCSFTTLLIQLGKFDM 182
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
D A + KM GI S LT+N ++ + K G+ ++ +++ + + +P+ F+Y
Sbjct: 183 VDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTS 242
Query: 207 CINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
I + +L+ + M P+ V TY++ + +++A D+L++
Sbjct: 243 LILGHCRNHNLDLAFAMFDRMVKDGCDPNSV----TYSTLINGLCSEGRLEEAMDMLEEM 298
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYI----------NRD--- 309
++ + Y + G SE + L ++K C I +RD
Sbjct: 299 VQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF 358
Query: 310 ---------------------YITMLEALMKLGEHEEAEKVLKEWELS-GNSYDTRIPNA 347
Y ++ L G E A + K W LS G+ T+ N
Sbjct: 359 EIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFK-WMLSHGSLPSTQTYNE 417
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY 407
+I +C G +Q A I + +++ G + ++ + GY G + ++
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEI----- 472
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEA-FVAALRTVIPMNRQMYHAFIKANIRNGK 466
++G G KPD T ++S G ++ + F + I N Y A I K
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Query: 467 GVDEL 471
D L
Sbjct: 533 VDDAL 537
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 171/407 (42%), Gaps = 18/407 (4%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--K 125
++ L K R +A +V + M + C ++ +D + + A+ F + +
Sbjct: 223 LMDGLCKGDRLQEAQQVLETMEDRN-CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVR 281
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
E TY +L++ + D AL +M G +TYN ++ KTG+ +
Sbjct: 282 GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEA 341
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
+ +MKAK PD +Y I + ++ + +M Q ++ D T+++
Sbjct: 342 NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA-VLPDVVTFSTLVE 400
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTACKR 304
Y A L+D A +L++ D Y L+ + +G E R L + K C+
Sbjct: 401 GYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQP 460
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+ Y +++A + G+ A K+L+E +G + ++I G+C G ++ A +
Sbjct: 461 NV-VTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKM 519
Query: 365 LEDLVEKGKATTPNSWA--VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
LE L E+ + + +A V+ G G+ + ++A ++ G P + +
Sbjct: 520 LERL-ERDENCKADMFAYRVMMDGLCRTGRMSAALELLEA-----IKQSGTPPRHDIYVA 573
Query: 423 ILSKL--GDE-GSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK 466
++ L G E G +V + R P N + Y A I+ R G+
Sbjct: 574 LIRGLCQGKELGKAMEVLEEMTLSRKSRP-NAEAYEAVIQELAREGR 619
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 149/360 (41%), Gaps = 19/360 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L K R +A M +KG V + V ++ +VH A +K+
Sbjct: 13 MIDGLCKANRLPEATTYFAKMKKKGT-VPNEWTYNVLINGFCKVHKVHRAYLLLKEMKES 71
Query: 128 --EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
TY +++ + RQ + D A FR+M E G + +TYN ++ + G ++
Sbjct: 72 GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEA 131
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
++L EM+ + + PD FSY + ++ M + + E S D Y++
Sbjct: 132 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKID-MALKVFEDNSNGDCPPDVVAYSTLIA 190
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKR 304
K +D+A + +K E + D + + L+ E ++ + +E C
Sbjct: 191 GLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP 250
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+ Y ++++ L K G+ +A++V K + G + N++I G+C V +A +
Sbjct: 251 NV-ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 309
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGK---TERGFQCMKAALSVYVEGKGWKPDPKVIT 421
+E++ G ++ + G G+ R F MKA +P VIT
Sbjct: 310 MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFC----------NPDVIT 359
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 118/255 (46%), Gaps = 11/255 (4%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
EK T+ +++ + + +A ++F KMK+ G + TYN ++ + K + +
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAA 244
+L EMK + P+ +Y I+ + ++ ++ + R+M P++V TY +
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLV----TYNTLL 119
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACK 303
+ L+D+A ++L + ER Q D Y+ L++ G L+++ D C
Sbjct: 120 SGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCP 179
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ Y T++ L K G +EA K+ ++ + D A++ G C +Q A+
Sbjct: 180 PDVVA-YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 238
Query: 364 ILEDLVEKGKATTPN 378
+LE + ++ TPN
Sbjct: 239 VLETMEDRN--CTPN 251
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 85/209 (40%), Gaps = 7/209 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L++ + + + +A ++M + G + +TY ++ + + G+ +L EM
Sbjct: 429 TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEM 488
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P+ +YR I + DLE +L +E + D Y +
Sbjct: 489 VGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGR 548
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYAS---LGNKSEVLRLWDLEKTACKRYINRD 309
+ A ++L+ ++ Y LI LG EVL L + + R
Sbjct: 549 MSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKS--RPNAEA 606
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGN 338
Y +++ L + G HEEA + EL GN
Sbjct: 607 YEAVIQELAREGRHEEANALAD--ELLGN 633
>gi|414864365|tpg|DAA42922.1| TPA: hypothetical protein ZEAMMB73_846849 [Zea mays]
Length = 485
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 125/284 (44%), Gaps = 21/284 (7%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCD---HAVQLDLIGRVHGFLSAESYFSNLKDDEKT 130
K +RF V D M+ GI C+ H +D G+ F E S + +
Sbjct: 208 KSRRFDLIPAVLDEMSYLGI----ECNSVIHNAIIDGYGKAAMFEEMEGALSTMLESGSN 263
Query: 131 YQ---TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
T +++ Y +TD+ + + + MG+ T T+N ++ Y K G Y K+
Sbjct: 264 VPDIYTMNSVVGAYGNHGRTDEMEKSYSEFQLMGVEPDTKTFNIMIRSYGKAGMYVKMMS 323
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
+ MK + P ++ I +G D+E ME R M+ Q + + TY S + Y
Sbjct: 324 IFRYMKKRFFSPTAVTFNTVIECFGRAGDIEKMEYYFRLMKIQ-GVKPNPITYCSLVNGY 382
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN---KSEVLRLWDLEKTACKR 304
KA L+DK + V+++ E D +N +IS YA G+ E+L+L ++ R
Sbjct: 383 SKAGLLDKVAGVIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQLMKEKRCKPDR 442
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
Y TM++A G +EA +L E+ +D R+ +V
Sbjct: 443 IT---YATMIQAYTAHG-MDEAAMLL---EIEAERFDKRLLGSV 479
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 114/263 (43%), Gaps = 2/263 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++C + R+ D + +M +GI +++ +N I+ Y K +E++ L+ M
Sbjct: 198 TFSVLVDCCAKSRRFDLIPAVLDEMSYLGIECNSVIHNAIIDGYGKAAMFEEMEGALSTM 257
Query: 193 -KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
++ + PD ++ + +YG + ME E + + D T+ Y KA
Sbjct: 258 LESGSNVPDIYTMNSVVGAYGNHGRTDEMEKSYSEFQLM-GVEPDTKTFNIMIRSYGKAG 316
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+ K + + ++R + +N +I + G+ ++ + L K + Y
Sbjct: 317 MYVKMMSIFRYMKKRFFSPTAVTFNTVIECFGRAGDIEKMEYYFRLMKIQGVKPNPITYC 376
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+++ K G ++ V+++ E + DT N VI Y +G ++ E +L+ + EK
Sbjct: 377 SLVNGYSKAGLLDKVAGVIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQLMKEK 436
Query: 372 GKATTPNSWAVVAAGYFDAGKTE 394
++A + Y G E
Sbjct: 437 RCKPDRITYATMIQAYTAHGMDE 459
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 144/371 (38%), Gaps = 50/371 (13%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E QTY LL + RQ A FR+M + + Y ++ Y +G E
Sbjct: 122 EPRSQTYARLLMMLGKCRQPGPAAGLFREMLSERLRPTADVYTALIGAYGYSGLLEHALA 181
Query: 188 VLTEMK-AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
+ +MK A + PD +++ + ++ + + +L EM S I + + +
Sbjct: 182 AVEQMKGAADCKPDGYTFSVLVDCCAKSRRFDLIPAVLDEM-SYLGIECNSVIHNAIIDG 240
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y KA + E+ +G +L L + S V ++ +
Sbjct: 241 YGKAAM--------------FEEMEG-------ALSTMLESGSNVPDIYTMN-------- 271
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+++ A G +E EK E++L G DT+ N +I Y G+ +I
Sbjct: 272 -----SVVGAYGNHGRTDEMEKSYSEFQLMGVEPDTKTFNIMIRSYGKAGMYVKMMSIFR 326
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAG---KTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
+ ++ + T ++ V + AG K E F+ MK +G KP+P S+
Sbjct: 327 YMKKRFFSPTAVTFNTVIECFGRAGDIEKMEYYFRLMKI--------QGVKPNPITYCSL 378
Query: 424 LSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGI 480
++ G + V + T + ++ ++ I A ++G K ++E+L MK
Sbjct: 379 VNGYSKAGLLDKVAGVIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQLMKEKRC 438
Query: 481 DEDEETKEILV 491
D T ++
Sbjct: 439 KPDRITYATMI 449
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 166/395 (42%), Gaps = 40/395 (10%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG +LN + T AL FRKM+E I S + Y+ ++ K G + + EM
Sbjct: 211 TYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM 270
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ K I D +Y I + +LREM + +I+ + T+++ ++K
Sbjct: 271 EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR-NIIPNVVTFSALIDVFVKEGK 329
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT-ACKRYINRDYI 311
+ +A ++ + R D I Y+ LI + E ++ DL + C+ I Y
Sbjct: 330 LLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNI-VTYS 388
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++ + K + ++ E G DT N ++ G+C +G + A+ + +++V +
Sbjct: 389 ILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSR 448
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQC--------MKAALSVY---VEG---------- 410
G + ++ ++ G D G+ ++ + M + +Y + G
Sbjct: 449 GVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDA 508
Query: 411 ---------KGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIK 459
KG KPD ++ L +GS+ + + ++ P + Y+ I+
Sbjct: 509 WSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCT-YNILIR 567
Query: 460 ANIRNGKGV---DELLDSMKADGIDEDEETKEILV 491
A++ G GV EL++ MK G D T +++V
Sbjct: 568 AHL-GGSGVISSVELIEEMKMRGFAADASTIKMVV 601
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 127/299 (42%), Gaps = 10/299 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ AL++ +V++ + +A + +M GIA T+TY+ ++ + K + + +L M
Sbjct: 316 TFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLM 375
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+K P+ +Y I INSY ++ + E+ S+ +V D TY + + ++
Sbjct: 376 VSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSK-GLVADTVTYNTLVQGFCQSGK 434
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI--NRDY 310
++ A ++ ++ R + Y L+ G + L ++ EK R I Y
Sbjct: 435 LNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIF--EKMQKSRMILGIGIY 492
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++ + + ++A + + G D N +I G C G + A+ + + E
Sbjct: 493 NIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKE 552
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G A + ++ ++ + + ++ ++ +G+ D I ++ L D
Sbjct: 553 DGCAPSDCTYNILIRAHLGGSGVISSVELIEE-----MKMRGFAADASTIKMVVVMLSD 606
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/384 (19%), Positives = 148/384 (38%), Gaps = 50/384 (13%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---CLYSKT 179
+L E T ++NC+ R+R+ A S + + G +T+T++ ++ CL +
Sbjct: 96 DLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRV 155
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWS 238
+ + D + EMK + P+ + IN + + E + +I R ++ +
Sbjct: 156 SEAVALVDRMVEMKYR---PNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEA--NEI 210
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL---- 294
TY + K+ A D+ +K EER + + Y+ +I GN + L L
Sbjct: 211 TYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM 270
Query: 295 ------------------------WDLEKTACKRYINRDYI-------TMLEALMKLGEH 323
WD + I R+ I +++ +K G+
Sbjct: 271 EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKL 330
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
EA+++ E G + DT +++I G+C + A +L+ +V KG +++++
Sbjct: 331 LEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSIL 390
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-EAFVAA 442
Y A + + G + L + KG D +++ G + E F
Sbjct: 391 INSYCKAKRVDNGMR-----LFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEM 445
Query: 443 LRTVIPMNRQMYHAFIKANIRNGK 466
+ +P + Y + NG+
Sbjct: 446 VSRGVPPSVVTYGILLDGLCDNGE 469
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K E TY L+N Y + ++ D + F ++ G+ T+TYN ++ + ++G+
Sbjct: 378 KGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNV 437
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
++ EM ++ + P +Y I ++ +L+ I +M+ + ++L Y
Sbjct: 438 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQ-KSRMILGIGIYNIII 496
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
H A+ +D A + + + D + YN +I G+ SE L+
Sbjct: 497 HGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLF 547
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 14/288 (4%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++ L K R A +V D M +G+ C+ LIG + + A + + D
Sbjct: 274 VMNQLCKDGRTKDAFKVFDEMRERGV----SCNIVTYNTLIGGLCREMKANEA-NKVMDQ 328
Query: 128 EKTYQ------TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
K+Y TY L++ + + KALS R +K G++ S +TYN ++ + + G
Sbjct: 329 MKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGD 388
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
++ EM+ + I P +Y I I+++ ARSD I LR + +V D TY+
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTF-ARSDNMETAIQLRSSMEELGLVPDVHTYS 447
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKT 300
H + +++AS + K E++ + + + YN +I Y G+ LRL+ D+E+
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEK 507
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
+ Y ++ L K + +EAE ++++ SG I N +
Sbjct: 508 ELAPNV-ASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 15/256 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MCLYSKTGQYEKVPDVL 189
TY ++N + +T A F +M+E G++ + +TYN + +C K + KV D
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMD-- 327
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHF 246
+MK+ I P+ +Y I+ + + L + R+++S+ P +V TY
Sbjct: 328 -QMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLV----TYNVLVSG 382
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTACKRY 305
+ + A+ ++K+ EER + + Y LI +A N ++L +E+
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPD 442
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
++ Y ++ G+ EA ++ K + I N +I+GYC G A +
Sbjct: 443 VH-TYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLF 501
Query: 366 EDLVEKGKATTPNSWA 381
D+ EK A S++
Sbjct: 502 RDMEEKELAPNVASYS 517
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/312 (18%), Positives = 123/312 (39%), Gaps = 14/312 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ + + + KM+E G+ + TYN +M K G+ + V EM
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEM 294
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ + + + +Y I ++ +M+S P+++ TY + +
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLI----TYNTLIDGFCS 350
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINR 308
+ KA + + + R + YN L+S + G+ S ++ ++E+ K
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPS-KV 409
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y +++ + E A ++ E G D + +I G+C G + A + + +
Sbjct: 410 TYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
VEK + + GY G + R + + +E K P+ + ++ L
Sbjct: 470 VEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRD-----MEEKELAPNVASYSYLIRVLC 524
Query: 429 DEGSVQDVEAFV 440
E +++ E V
Sbjct: 525 KERKLKEAEDLV 536
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 150/358 (41%), Gaps = 17/358 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L++ ++ + +KA F +M + G+ + TY ++ K G ++ ++ +M+
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQ 260
Query: 194 AKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+FP+ ++Y +N G D + +RE +IV ++T +KA
Sbjct: 261 EHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIV-TYNTLIGGLCREMKA 319
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRD 309
N +A+ V+ + + + + I YN LI + S+G + L L DL+ +
Sbjct: 320 N---EANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSL-VT 375
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ + G+ A K++KE E G +I + + ++ A + +
Sbjct: 376 YNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSME 435
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E G ++++V+ G+ G+ + K+ + +E P+ + +++
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLE-----PNEVIYNTMILGYCK 490
Query: 430 EG-SVQDVEAFVAALRTVIPMNRQMYHAFIKANI--RNGKGVDELLDSMKADGIDEDE 484
EG S + + F + N Y I+ R K ++L++ M GID +
Sbjct: 491 EGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSD 548
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 179/437 (40%), Gaps = 30/437 (6%)
Query: 62 VGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYF 121
+ + R++ + K K++ + + + M GI C + L+ R A S+
Sbjct: 81 IADFSRLLSAISKMKKYDVVIYLWEQMQMLGI-PHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 122 SNLK--DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
+ E T+G+LLN + R + AL F +M EMG + + YN I+ K+
Sbjct: 140 GKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKS 199
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLD 236
Q + D+L M+ I PD +Y I+ G D M + + E P D
Sbjct: 200 KQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYP----D 255
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI---SLYASLGNKSEVLR 293
T+ + +K I +A ++ ++ R D + Y+ LI +Y+ L +++E +
Sbjct: 256 VFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRL-DEAEQMF 314
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
+ + K + Y ++ K + E K+ E G +T +I GYC
Sbjct: 315 GFMVSKGCFPDVVT--YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYC 372
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
G + AE I + +V G ++ V+ G D GK E+ AL + + +
Sbjct: 373 RAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEK-------ALVILADMQKS 425
Query: 414 KPDPKVITS--ILSKLGDEGSVQDVEAFVAA--LRTVIPMNRQMYHAFIKANIRNG-KG- 467
D ++T I+ + G V D + L+ + P + Y A + + G +G
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTP-DIWTYTAMMLGLYKKGLRGE 484
Query: 468 VDELLDSMKADGIDEDE 484
D L MK DGI +E
Sbjct: 485 ADALFRKMKEDGILPNE 501
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 150/363 (41%), Gaps = 46/363 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LL+ R+ D+A FR M E GI TY+ ++ + K + EKV ++L EM
Sbjct: 12 TYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEM 71
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ FPD SY + + ++ ++ + R+M+ V + +TY+ + Y +
Sbjct: 72 ESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQG-AGCVPNAATYSILLNLYGRHGR 130
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
D D+ + + + + YN LI+++ G EV+ L+
Sbjct: 131 YDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFH---------------D 175
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
M+E E E ++ +E +I GL ++A+ IL + EKG
Sbjct: 176 MVE--------ENVEPNMETYE------------GLIFACGKGGLHEDAKKILLHMNEKG 215
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
+ ++ V Y A E V G KP + S++ G
Sbjct: 216 VVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEV-----GSKPTVETYNSLIQMFAKGGL 270
Query: 433 VQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGKGVDELLDS---MKADGIDEDEETKE 488
++ EA + + ++ + NR ++ I+A R G +E + + M+ D DE+T E
Sbjct: 271 YKESEAILLKMGQSGVARNRDTFNGVIEA-FRQGGQFEEAIKAYVEMEKARCDPDEQTLE 329
Query: 489 ILV 491
++
Sbjct: 330 AVL 332
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 126/305 (41%), Gaps = 40/305 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y LL + + +A+ FR+M+ G + TY+ ++ LY + G+Y+ V D+ EM
Sbjct: 82 SYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEM 141
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPH----------------- 232
K N P+ +Y I IN +G + + + +M +P+
Sbjct: 142 KVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLH 201
Query: 233 --------------IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+V Y Y +A L ++A E + YN L
Sbjct: 202 EDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSL 261
Query: 279 ISLYASLG--NKSEVLRLWDLEKTACKRYINRD-YITMLEALMKLGEHEEAEKVLKEWEL 335
I ++A G +SE + L + ++ R NRD + ++EA + G+ EEA K E E
Sbjct: 262 IQMFAKGGLYKESEAI-LLKMGQSGVAR--NRDTFNGVIEAFRQGGQFEEAIKAYVEMEK 318
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
+ D + AV+ YC GLV+ +E ++ G + + ++ A Y A + +
Sbjct: 319 ARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDD 378
Query: 396 GFQCM 400
Q +
Sbjct: 379 AHQLL 383
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 108/249 (43%), Gaps = 7/249 (2%)
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD--DEKTYQTYGALLNCYVRQR 145
MN KG+ + V ++ G+ + A F+ + + + T +TY +L+ + +
Sbjct: 211 MNEKGVVPSSKAYTGV-IEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGG 269
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
++ + KM + G+A + T+N ++ + + GQ+E+ EM+ PD +
Sbjct: 270 LYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLE 329
Query: 206 ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA-E 264
++ Y +E E E+++ I+ Y Y KA+ D A +L +
Sbjct: 330 AVLSVYCFAGLVEESEEQFGEIKALG-ILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFT 388
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKLGEH 323
R+ + + Y N V +++ L+ C + R Y T+LEAL LG+
Sbjct: 389 NRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGV-RFYNTLLEALWWLGQK 447
Query: 324 EEAEKVLKE 332
E A +VL E
Sbjct: 448 ERATRVLNE 456
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 1/269 (0%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T + Y +L++ Y R D+ALS RKMKE GI +S +TY+ I+ +SK G E
Sbjct: 343 TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF 402
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
E K + + Y I ++ ++E E ++REME + I + Y + Y
Sbjct: 403 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEG-IDAPIAIYHTMMDGYTM 461
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
K V K+ +E + Y LI+LY +G S+ L + + K ++ +
Sbjct: 462 VADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 521
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y M+ +KL + A V ++ G D + N +I +C G + A ++++
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ T ++ + GY +G R +
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
II K ++LEV D M R G CV P H G ++G + L D
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCG-CV--PTVHTFN----GLINGLVEKRQAVEIL--D 645
Query: 128 EKTY-------QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
E T TY ++ Y T KA +F +++ G+ + TY ++ K+G
Sbjct: 646 EMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSG 705
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ + V EM A+NI ++F Y I I+ + R D+ ++++M+ + + D TY
Sbjct: 706 RMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG-VKPDIHTY 764
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
S +I A KA D + +A + +E+ + +G I Y +L
Sbjct: 765 TS----FISA--CSKAGD-MNRATQTIEEMEALGVKPNIKTYTTL 802
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 74/375 (19%), Positives = 148/375 (39%), Gaps = 32/375 (8%)
Query: 77 RFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY---FSNLKDDEKTYQT 133
+ S+ALEVS M +G+ H ++ + ++GF+ + + F+ +D K
Sbjct: 499 KISKALEVSRVMKEEGV------KHNLKTYSM-MINGFVKLKDWANAFAVFEDMVKEGMK 551
Query: 134 -----YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
Y +++ + D+A+ ++M+++ +T T+ I+ Y+K+G + +V
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
M+ P ++ IN G + +E IL EM + + + TY Y
Sbjct: 612 FDMMRRCGCVPTVHTFNGLIN--GLVEKRQAVE-ILDEM-TLAGVSANEHTYTKIMQGYA 667
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
KA + + + D Y L+ G L + K R I R
Sbjct: 668 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL---AVTKEMSARNIPR 724
Query: 309 D---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+ Y +++ + G+ EA ++++ + G D + I G + A +
Sbjct: 725 NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI 784
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
E++ G ++ + G+ A E+ C + ++ G KPD V +L+
Sbjct: 785 EEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEE-----MKAMGIKPDKAVYHCLLT 839
Query: 426 KLGDEGSVQDVEAFV 440
L S+ EA++
Sbjct: 840 SLLSRASI--AEAYI 852
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 151/368 (41%), Gaps = 24/368 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L ++R R+ K + +M+ G L YN ++ +K+G ++ V +M
Sbjct: 188 TYKCILQAHLRSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQAYQVFEDM 247
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K K PD ++Y I I G EM S+ L+ Y + K +
Sbjct: 248 KQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSK-GCALNLIAYNTLIEALGKNKM 306
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YI 311
+DK VL K E Q + Y+ + + A G + + D+ C RY+N+ Y
Sbjct: 307 VDKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQLHRLNEVLDI----CDRYMNKSIYS 362
Query: 312 TMLEALMKLGEHEEAEKVLKE-WELSGNSYDTRIPNAVIIG---YCNNGLVQNAEAILED 367
++++L K G EA V + W NSY+T +A + CN+G A +L
Sbjct: 363 YLVKSLSKSGHVSEAHNVFCQMW----NSYETGDRDAFVSMLEVLCNSGKTLEAIDLLHM 418
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ EKG AT + +V + GK ++ +L ++ G PD ++S
Sbjct: 419 MPEKGVATDVGMYNMVFSAL---GKLKQ--VSFITSLFDKMKANGIAPDLFTYNIMISSY 473
Query: 428 GDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDED 483
G G V + + + Y++ I +NG +DE L M+ G D
Sbjct: 474 GRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGD-LDEAHMLFKEMQEKGYGPD 532
Query: 484 EETKEILV 491
T IL+
Sbjct: 533 VFTYSILI 540
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y + + + +Q S F KMK GIA TYN ++ Y + G +K + +M
Sbjct: 431 YNMVFSALGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMN 490
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
A + PD +Y IN G DL+ ++ +EM+ + + D TY+ + K+N +
Sbjct: 491 ASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGP-DVFTYSILIECFGKSNKV 549
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
D A ++ + + YN L+ G +E + ++ K
Sbjct: 550 DMACNLFLDMIAEGCIPNVVTYNILLDCLERHGKTAEAHKHYETMK 595
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 139/358 (38%), Gaps = 39/358 (10%)
Query: 72 LRKRKRFSQALEVSDWMNRKG--ICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD-- 127
LR R+ S+ EV + M RKG + +F + + LD + + A F ++K
Sbjct: 197 LRSRE-VSKGFEVYEEMRRKGYMLDIFG---YNMLLDALAKSGMVDQAYQVFEDMKQKYC 252
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E TY L+ R + K LS F +M G AL+ + YN ++ K +KV
Sbjct: 253 EPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLIEALGKNKMVDKVIF 312
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDL----EGMEIILREME--------------- 228
VL++M P+ F+Y I ++ L E ++I R M
Sbjct: 313 VLSKMIEGGCQPNQFTYSITLDILAKEGQLHRLNEVLDICDRYMNKSIYSYLVKSLSKSG 372
Query: 229 --SQPHIVL----------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
S+ H V D + S + +A D+L E+ D YN
Sbjct: 373 HVSEAHNVFCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDLLHMMPEKGVATDVGMYN 432
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
+ S L S + L+D K Y M+ + ++G ++A + ++ S
Sbjct: 433 MVFSALGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMNAS 492
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
D N++I NG + A + +++ EKG +++++ + + K +
Sbjct: 493 SCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVD 550
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 11 TQIHNAVFSRFYYTNRI-NKTTLYSIISPLGNPGTRIEP--ELDNWVKNGNKVRVGELQR 67
++ HN VF + + + ++ S++ L N G +E L + G VG
Sbjct: 375 SEAHN-VFCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNM 433
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLK 125
+ L K K+ S + D M GI AP + + + GRV A F ++
Sbjct: 434 VFSALGKLKQVSFITSLFDKMKANGI---APDLFTYNIMISSYGRVGLVDKASGLFEDMN 490
Query: 126 DD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+ TY +L+NC + D+A F++M+E G TY+ ++ + K+ + +
Sbjct: 491 ASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVD 550
Query: 184 KVPDVLTEMKAKNIFPDNFSYRI---CINSYG 212
++ +M A+ P+ +Y I C+ +G
Sbjct: 551 MACNLFLDMIAEGCIPNVVTYNILLDCLERHG 582
>gi|302763057|ref|XP_002964950.1| hypothetical protein SELMODRAFT_406577 [Selaginella moellendorffii]
gi|300167183|gb|EFJ33788.1| hypothetical protein SELMODRAFT_406577 [Selaginella moellendorffii]
Length = 464
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 114/251 (45%), Gaps = 7/251 (2%)
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
D+A M+ G AL+ +T+N ++ K+G+ ++ V+ M +NI P+ + +
Sbjct: 213 DEAFDLMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILTLNLI 272
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
+ + L GM ++ EM P IV T+ + + + +D A+++L+
Sbjct: 273 LQAARPEEAL-GMTDVMVEMGFCPTIV----TFNALLELFCNTDQMDSATELLETMARSK 327
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM-LEALMKLGEHEEA 326
+ + + Y+ ++ +A +G E R + + C N + L K GE + A
Sbjct: 328 CKPNFVTYSIMVQKFAEMGRMVEA-RAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLA 386
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
+ L G +T N+++ G+C G + AE +LE+++ +G ++ V+ G
Sbjct: 387 SRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYNVLIQG 446
Query: 387 YFDAGKTERGF 397
AG+ E F
Sbjct: 447 LCSAGQIEHAF 457
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 157/359 (43%), Gaps = 19/359 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ ++++ + + +M G+ + +TYN ++ + G+ + VL EM
Sbjct: 225 TYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEM 284
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ + PD F+Y I + + D + M + L E + + + T + + K
Sbjct: 285 ASRKMVPDGFTYSILFDGHSRTGDSQTM-LSLFEESVKKGVKIGAYTCSILLNGLCKDGK 343
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
I KA +VL+ + + YN LI+ Y +G+ ++ K+ R I D+IT
Sbjct: 344 ISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKS---RLIRPDHIT 400
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
++ L K+ EA ++ E E +G + N +I Y G ++ IL D+
Sbjct: 401 YNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQ 460
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
EKG S+ + + GK + +++ K P +V +I+ +
Sbjct: 461 EKGLKPNVVSYGSIVNAFCKNGKILEAVAILD---DMFI--KDVLPGAQVYNAIIDAYIE 515
Query: 430 EGSVQDVEAFVAALR---TVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
GS +AF+ A + + +P + Y+ IK + + +ELLDS++ G+ D
Sbjct: 516 CGSTD--QAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPD 572
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 145/359 (40%), Gaps = 52/359 (14%)
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
+T Y L+N Y + + A S F++MK I +TYN ++ K + + D+
Sbjct: 361 QTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDL 420
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAH 245
+ EM+ + P ++ I++YG LE IIL +M+ +P++V +Y S +
Sbjct: 421 VIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVV----SYGSIVN 476
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
+ K I +A +L + + D+ A
Sbjct: 477 AFCKNGKILEAVAILDD-----------------------------MFIKDVLPGA---- 503
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+ Y +++A ++ G ++A + ++ + SG N +I G C + AE +L
Sbjct: 504 --QVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELL 561
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+ L G A S+ + + T+R + K G KP P+ + S
Sbjct: 562 DSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKC-----GIKPSPRTYRMLFS 616
Query: 426 KLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGI 480
LG G V ++E + + V+P + +Y+ + A + G+ V+ L M GI
Sbjct: 617 SLGGAGRVHEMENLYQQMLDKDVVPCS-GIYNIMVDAYAKCGEESKVEALRKEMSDKGI 674
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 158/388 (40%), Gaps = 55/388 (14%)
Query: 148 DKALSHFRKMKEMGI-ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
D+A+ R+M G A + +YN ++ K G + EM K + P++ +Y
Sbjct: 169 DEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNT 228
Query: 207 CINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
I+ + + DLE + +M +P+++ TY +A + + + VL +
Sbjct: 229 MIDGHIKKGDLESGFRLWSQMLRHGLKPNVI----TYNVLLSGLCRAGRMGETAAVLDEM 284
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEH 323
R DG Y+ L ++ G+ +L L++ + +L L K G+
Sbjct: 285 ASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKI 344
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE----------------- 366
+AE+VL+ SG T I N +I GYC G ++ A +I +
Sbjct: 345 SKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNAL 404
Query: 367 --------------DLV----EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYV 408
DLV + G + ++ + Y AG+ E+ F + +
Sbjct: 405 INGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSD-----M 459
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQDVEAFV--AALRTVIPMNRQMYHAFIKANIRNGK 466
+ KG KP+ SI++ G + + A + ++ V+P Q+Y+A I A I G
Sbjct: 460 QEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLP-GAQVYNAIIDAYIECGS 518
Query: 467 GVDE---LLDSMKADGIDEDEETKEILV 491
D+ L + MK+ G+ T +L+
Sbjct: 519 -TDQAFMLAEKMKSSGVPPSIVTYNLLI 545
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+KD Q Y A+++ Y+ TD+A KMK G+ S +TYN ++ K Q
Sbjct: 496 IKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQIS 555
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM-----ESQPHIV-LDW 237
+ ++L ++ + PD SY I++ RS+ + + +EM + P + +
Sbjct: 556 EAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLF 615
Query: 238 STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
S+ A + NL + D + + GI YN ++ YA G +S+V
Sbjct: 616 SSLGGAGRVHEMENLYQQMLD------KDVVPCSGI-YNIMVDAYAKCGEESKV 662
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 53/107 (49%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y L++ + TD+AL ++M + GI S TY + G+ ++ ++ +M
Sbjct: 575 SYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQM 634
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
K++ P + Y I +++Y + +E + +EM + V D+++
Sbjct: 635 LDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVGDYTS 681
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 161/393 (40%), Gaps = 36/393 (9%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A++ FS +++ TY ++N + + +A R+M E ++ +T++ ++
Sbjct: 267 AQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLIN 326
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---P 231
K G++ + ++ EM + I P+ +Y I+ + ++ L+ E + M ++ P
Sbjct: 327 ALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSP 386
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
++ T++ Y A +D +L + R + I Y LI + LGN +
Sbjct: 387 DVI----TFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAA 442
Query: 292 LRLWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP---- 345
L L + C + + T+L+ L G+ ++A ++ K + S D P
Sbjct: 443 LDLLQEMISSGVCPNVVTCN--TLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDV 500
Query: 346 -------NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
N +I G N G AE + E++ +G ++ V G + + Q
Sbjct: 501 EPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQ 560
Query: 399 CMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMN----RQM 453
+ S KG+ PD T++++ G V D +E F R I N R +
Sbjct: 561 MFDSMGS-----KGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTL 615
Query: 454 YHAFIKANIRNGKGVDELLDSMKADGIDEDEET 486
H F + + N G ++ M + G+ D T
Sbjct: 616 IHGFCQ--VGNINGALDIFQEMISSGVYPDTIT 646
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 158/377 (41%), Gaps = 27/377 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMG-IALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TYG +++ + T AL+ RKM+E+ I + + Y+ I+ K G+ ++ +E
Sbjct: 214 TYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSE 273
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYI 248
M+ K I P+ F+Y IN + + + +LREM + P +V T++ + +
Sbjct: 274 MQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVV----TFSVLINALV 329
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K +A ++ + R + I YN +I ++ R++ L T + +
Sbjct: 330 KEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMAT---KGCSP 386
Query: 309 DYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
D IT +++ ++ K+L E G +T +I G+C G + A +L
Sbjct: 387 DVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLL 446
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAA------LSVYVEGKGWKPDPKV 419
++++ G + + G + GK + + K L +PD +
Sbjct: 447 QEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQT 506
Query: 420 ITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVDE---LLDS 474
++ L +EG + E + R ++P + Y++ I + + +DE + DS
Sbjct: 507 YNILICGLINEGKFSEAEELYEEMPHRGLVP-DTITYNSVIDGLCKQSR-LDEATQMFDS 564
Query: 475 MKADGIDEDEETKEILV 491
M + G D T L+
Sbjct: 565 MGSKGFSPDVVTFTTLI 581
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 119/270 (44%), Gaps = 12/270 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKM-KEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
T+ LL+ + + +AL F ++ K IA +TL +C + G+ + +L
Sbjct: 148 TFSTLLHGLCVEDRVSEALHFFHQICKPNVIAFTTLMNG--LC---REGRVVEAVALLDR 202
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M + P+ +Y ++ D +LR+ME I + Y++ K
Sbjct: 203 MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDG 262
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
A ++ + +E+ + YN +I+ + S G SE RL + +R ++ D +
Sbjct: 263 RQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLL---REMFERKMSPDVV 319
Query: 312 T---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
T ++ AL+K G+ EAE++ E G +T N++I G+ + AE + +
Sbjct: 320 TFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLM 379
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
KG + +++++ GY A + + G +
Sbjct: 380 ATKGCSPDVITFSILIDGYCGAKRVDDGMK 409
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 34/138 (24%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L K+ R +A ++ D M KG F+P D++
Sbjct: 545 VIDGLCKQSRLDEATQMFDSMGSKG---FSP-------DVV------------------- 575
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
T+ L+N Y + + L F +M GI + +TY ++ + + G D
Sbjct: 576 -----TFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALD 630
Query: 188 VLTEMKAKNIFPDNFSYR 205
+ EM + ++PD + R
Sbjct: 631 IFQEMISSGVYPDTITIR 648
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 136/342 (39%), Gaps = 7/342 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++NC + + D+A +M + G T T+N ++ S + E+ D+ E+
Sbjct: 339 TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAREL 398
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PD +++ I IN+ D + EM+S D TY
Sbjct: 399 TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSS-GCTPDEVTYNILIDHLCSMGK 457
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A D+L + E + + YN +I E ++D + T
Sbjct: 458 LGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNT 517
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ L K ++A +++++ G + N+++ YC G ++ A ILE + G
Sbjct: 518 LIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANG 577
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
++ + G AG+T+ + ++ + KG +P PK ++ L +
Sbjct: 578 FEIDVVTYGTLINGLCKAGRTQVALKLLRG-----MRIKGIRPTPKAYNPVIQSLFRRNN 632
Query: 433 VQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLD 473
++D + F P + Y ++ R G + E D
Sbjct: 633 LRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFD 674
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 130/302 (43%), Gaps = 6/302 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T L+N Y + + + AL + ++ G +TYN + + G V+ M
Sbjct: 269 TVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLM 328
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD F+Y IN +L+ + I+ +M + + D +T+ + N
Sbjct: 329 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDR-GCLPDTTTFNTLIVALSSQNR 387
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+++A D+ ++ + D +N LI+ +G+ +RL++ K++ Y
Sbjct: 388 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNI 447
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ L +G+ A +L E E +G T N +I C ++ AE + + + +G
Sbjct: 448 LIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQG 507
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
+ + ++ + G A + + + ++ + +G +P+ SIL+ +G+
Sbjct: 508 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVK-----EGLQPNNITYNSILTHYCKQGN 562
Query: 433 VQ 434
++
Sbjct: 563 IK 564
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 157/376 (41%), Gaps = 28/376 (7%)
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
DE T+ T L+ ++ + + AL KM E G + + +T N ++ Y K G+ E
Sbjct: 231 DETTFTT---LMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDAL 287
Query: 187 DVLTEMKAKNIFPDNFSYR-----ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
+ + A PD +Y +C N + + + L+ M+++L+E D TY
Sbjct: 288 GYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHA-LKVMDLMLQEGHDP-----DVFTYN 341
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
+ + K +D+A ++ + +R D +N LI +S E L DL +
Sbjct: 342 TVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEAL---DLAREL 398
Query: 302 CKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
+ ++ D T ++ AL K+G+ ++ +E + SG + D N +I C+ G +
Sbjct: 399 TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKL 458
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
NA +L ++ G + ++ + + E + ++ +G
Sbjct: 459 GNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQ-----MDAQGISRSAV 513
Query: 419 VITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSM 475
+++ L + D + + + + N Y++ + + G K ++L++M
Sbjct: 514 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETM 573
Query: 476 KADGIDEDEETKEILV 491
A+G + D T L+
Sbjct: 574 TANGFEIDVVTYGTLI 589
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 3/162 (1%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
II L K+ R +A EV D M+ +GI A + + +D + + A + +
Sbjct: 483 IIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTL-IDGLCKAKRIDDATELIEQMVKE 541
Query: 128 --EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+ TY ++L Y +Q KA M G + +TY ++ K G+ +
Sbjct: 542 GLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVA 601
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
+L M+ K I P +Y I S R++L + REM
Sbjct: 602 LKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREM 643
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 195/490 (39%), Gaps = 62/490 (12%)
Query: 35 IISPLGNPGT--RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKG 92
IIS LG G + D G V +I + ++ +LE+ + M R+
Sbjct: 154 IISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRER 213
Query: 93 I--------CVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQ 144
+ V C LD G + F AE ++ D TY T LL+ +
Sbjct: 214 VSPNILTYNTVINACARG-DLDWEGLLGLF--AEMRHEGVQPDLVTYNT---LLSACAAR 267
Query: 145 RQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSY 204
D+A F+ M E GI TY+ I+ + K G+ EKV +L EM+++ PD SY
Sbjct: 268 GLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSY 327
Query: 205 RICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE 264
+ I ++ ++ + ++M++ V + STY+ + Y K D ++ + +
Sbjct: 328 NVLIEAHAKLGSIKEAMDVFKQMQA-AGCVPNASTYSILLNLYGKHGRYDDVRELFLQMK 386
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEH 323
E + D YN LI ++ G EV+ L+ DL + Y ++ A K G H
Sbjct: 387 ESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNM-ETYEGLVFACGKGGLH 445
Query: 324 EEAEKVL-----KEWELSGNSYDTRIP------------------------------NAV 348
E+A+K+L K S +Y I N++
Sbjct: 446 EDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSL 505
Query: 349 IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYV 408
I + GL + EAIL + E G + S++ + GY +G+ E + V +
Sbjct: 506 IHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAF-----VEM 560
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKG 467
E + D + + +L G V + E F+ + I + Y + +NG+
Sbjct: 561 EKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRW 620
Query: 468 VD--ELLDSM 475
D ELLD M
Sbjct: 621 DDASELLDEM 630
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 159/405 (39%), Gaps = 56/405 (13%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K +E Y +LL R+ +K F +M G+ S +Y ++ Y + GQYE
Sbjct: 145 KPNEHIYTIIISLLG---REGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYET 201
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDL--EGMEIILREMES---QPH------- 232
++L MK + + P+ +Y IN+ AR DL EG+ + EM QP
Sbjct: 202 SLELLERMKRERVSPNILTYNTVINA-CARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTL 260
Query: 233 ------------------------IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
IV + +TY+ + K ++K + +LK+ E
Sbjct: 261 LSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGY 320
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
D YN LI +A LG+ E + ++ + A Y +L K G +++ +
Sbjct: 321 LPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRE 380
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ + + S D N +I + G + + DLV++ ++ + F
Sbjct: 381 LFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLV---F 437
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA------- 441
GK G + ++ GKG P K + ++ G + ++ D EA VA
Sbjct: 438 ACGKG--GLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYG-QAALYD-EALVAFNTMNEV 493
Query: 442 ALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEET 486
++ I + H F + + K + +L M+ GI + ++
Sbjct: 494 GSKSTIDTYNSLIHTFARGGLY--KEFEAILSRMREYGISRNAKS 536
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 87/238 (36%), Gaps = 39/238 (16%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ Y L+ Y + D+AL F M E+G + TYN ++ +++ G Y++ +L+
Sbjct: 465 KAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSR 524
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ I + S+ I Y E EME LD T Y A
Sbjct: 525 MREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKM-RCELDEQTLEGVLGVYCFAG 583
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--------------- 296
L+D++ + + + + Y ++++YA G + L D
Sbjct: 584 LVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIG 643
Query: 297 ----------------------LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
L C + R Y T+LEAL LG+ A +VL E
Sbjct: 644 QMIKGDYDDDSNWQMVEYVFDKLNAEGCG-FGMRFYNTLLEALWWLGQKGRAARVLTE 700
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 12/297 (4%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY L+ R ++ KA R++ + G+ +TYN ++ + K GQ ++
Sbjct: 340 RTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNS 399
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M + + PD F++ I+ LE IL M + I LD T+ + + K
Sbjct: 400 MNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM-VKKGISLDEVTFTALIDGHCK-- 456
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
I KA DV E +E + + +LG ++ + K + +
Sbjct: 457 -IGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVV 515
Query: 312 T---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
T ++E + GE + K+L+ + +G S + +I G CNNG V+ AE IL +
Sbjct: 516 THTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSM 575
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
G + ++AV+ + AG+ +R FQ + + G +P+ + +++LS
Sbjct: 576 SSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK-----NGCQPNSHIYSALLS 627
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/376 (19%), Positives = 143/376 (38%), Gaps = 38/376 (10%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K + + +TY L+ TDKA+ +M + TY ++ + G+ E+
Sbjct: 228 KGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEE 287
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYA 241
V +M + P ++ IN Y + +L ME +P+I TY
Sbjct: 288 ANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNI----RTYN 343
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
+ + KA +L++ + D + YN L+ + G + +++ +A
Sbjct: 344 ELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSA 403
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
+ +++ L KLG E+A +L G S D A+I G+C G ++
Sbjct: 404 GLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDV 463
Query: 362 EAILEDLVEKGKATTPNSW------------------------------AVVAAGYFDAG 391
+ E++VE TT +++ +VV G
Sbjct: 464 CFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEG 523
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMN 450
G + + ++ G P+ T I++ L + G V++ E + ++ + + N
Sbjct: 524 HCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPN 583
Query: 451 RQMYHAFIKANIRNGK 466
Y +KA+++ G+
Sbjct: 584 HFTYAVLVKAHVKAGR 599
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 147/370 (39%), Gaps = 28/370 (7%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+Y Y LL C + A +R+M G L + Y ++ K G +
Sbjct: 92 SYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQA----- 146
Query: 190 TEMKAKNIFPDNFSY--RICINSYGA---RSDLEGMEIILREMESQPHIVLDWSTYASAA 244
EM + F +C + A R DL + +M + + TY+
Sbjct: 147 AEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILI 206
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACK 303
H +A +++A + ++ E+ Q Y LI +G + +++ D + AC
Sbjct: 207 HGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACV 266
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
++ Y +++ L + G+ EEA V ++ G NA+I GYC G V +A
Sbjct: 267 PNVH-TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQ 325
Query: 364 ILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAAL-----------SVYVEG 410
+L ++EKG PN ++ + G K+ + F ++ + ++ V+G
Sbjct: 326 LL-SVMEKGNC-KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 383
Query: 411 KGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNR-QMYHAFIKANIRNGKGVD 469
+ + +I + + G D F A + + + R + + + + ++ G +D
Sbjct: 384 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 443
Query: 470 ELLDSMKADG 479
E+ + DG
Sbjct: 444 EVTFTALIDG 453
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 140/329 (42%), Gaps = 16/329 (4%)
Query: 121 FSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
F N+ ++ T T+ L+ + + ++A + KM + G+ S +T+ ++ + +
Sbjct: 467 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 526
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
G+ +L MK P+ ++Y I IN +E E IL M S + +
Sbjct: 527 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG-VSPNHF 585
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW--- 295
TYA ++KA +D+A ++ + Q + Y+ L+S + L N + R
Sbjct: 586 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFV-LSNTAIGARALSST 644
Query: 296 -DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
DL+ + N D + + +L + + A K+ E + G + + N +++G C
Sbjct: 645 GDLDARSLSSEEN-DNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTED-LYNFLVVGLCK 702
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
G + A+ + +D+V+ G + + + Y K + + MK L +
Sbjct: 703 EGRIIEADQLTQDMVKHG-LFPDKAISSIIEHYCKTCKYDNCLEFMKLVLD-----NKFV 756
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFVAAL 443
P ++ L +EG VQ+ + V+ L
Sbjct: 757 PSFASYCWVIHGLRNEGRVQEAQKLVSDL 785
>gi|410110079|gb|AFV61119.1| pentatricopeptide repeat-containing protein 123, partial [Junellia
succulentifolia]
Length = 382
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 156/364 (42%), Gaps = 25/364 (6%)
Query: 73 RKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT 130
RK +S+A+ + + R G F P + +++ G+ F A S S ++ T
Sbjct: 16 RKLCDYSKAISIFSRLKRSG---FMPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVT 72
Query: 131 YQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
T Y LL YV ++ +ALS F +M+E+ L T N ++ +Y + G ++ +
Sbjct: 73 PNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 132
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
M+ I P+ SY + YG ++L G I L + + +I + TY S Y
Sbjct: 133 FWGMRKMGIEPNVVSYNTLLRVYG-DAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 191
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K +KA++++++ + R + + I Y+ +IS++ +G L+ +++
Sbjct: 192 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV 251
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG-YCNNGLVQNAEAILED 367
Y TM+ A + G A+++L E + N IP + I G ++ A +
Sbjct: 252 LYQTMIVAYERAGLVAHAKRLLHELKRPDN-----IPRDIAIHILAGAGRIEEATWVFRQ 306
Query: 368 LVEKGKA---TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
++ G T + + Y G F M+ G G+ PD VI +L
Sbjct: 307 AIDAGXVKDITVFERMIHLFSKYKKYGNVVEVFDKMR--------GLGYFPDSNVIALVL 358
Query: 425 SKLG 428
+ G
Sbjct: 359 NAYG 362
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/239 (17%), Positives = 98/239 (41%), Gaps = 6/239 (2%)
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
Y++++ L K Y K + + +K PD +Y IN +G ++ EM
Sbjct: 8 YSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRDARSLISEMR 67
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
+ + + ++Y++ Y++ +A V + E D N +I +Y LG
Sbjct: 68 T-AGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMA 126
Query: 289 SEVLRL-WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
E +L W + K + + Y T+L EA + + + + N+
Sbjct: 127 KEADKLFWGMRKMGIEPNV-VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNS 185
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG---FQCMKAA 403
+++ Y + A +++++ +G +++ + + + GK +R FQ ++++
Sbjct: 186 MMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 244
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 126/282 (44%), Gaps = 9/282 (3%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TY ++N + +T A F+KM E G +TY+ I+ K + + D+ +
Sbjct: 11 HTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSY 70
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYI 248
MKAK I P+ F+Y I S +L EM S P+IV T++ + +
Sbjct: 71 MKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV----TFSLLINIFC 126
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT-ACKRYIN 307
K + +A VLK E + + + Y+ L++ Y+ E +L+D+ T CK +
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDV- 185
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y ++ K EA+++ E G + D N +I G C G ++ A + ++
Sbjct: 186 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 245
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
++ G +++++ G+ G + F+ +A S Y++
Sbjct: 246 MLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLK 287
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 113/282 (40%), Gaps = 24/282 (8%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
II L K +R ++AL++ +M KGI +P I + + FS ++
Sbjct: 51 IIDSLCKDRRVNEALDIFSYMKAKGI---SPN--------IFTYNSLIQGLCNFSRWREA 99
Query: 128 EKTYQ------------TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCL 175
T+ L+N + ++ +A + M EMG+ + +TY+ +M
Sbjct: 100 SAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG 159
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVL 235
YS + + + M K PD FSY I IN Y + + + EM Q +
Sbjct: 160 YSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ-GLTP 218
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
D +Y + + + +A D+ K D Y+ L+ + G ++ RL+
Sbjct: 219 DIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLF 278
Query: 296 DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
++ + Y +++A+ K +EA K+ E + G
Sbjct: 279 RAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 320
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 169/415 (40%), Gaps = 22/415 (5%)
Query: 68 IIRDLRKRKRFSQALEVSD-WMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD 126
I+R L + +A+EV D M R+ C + + ++ + G A ++D
Sbjct: 218 ILRTLCDSGKLKEAMEVLDRQMQRE--CYPDVITYTILIEATCKESGVGQAMKLLDEMRD 275
Query: 127 D--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
+ TY L+N ++ + D+A+ M G + +T+N I+ TG++
Sbjct: 276 KGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMD 335
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
L EM K P ++ I IN + R L G I + E Q + +Y
Sbjct: 336 AEKFLAEMIRKGCSPSVVTFNILIN-FLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLL 394
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACK 303
H K +++A + L R D + YN L++ G + + + L C
Sbjct: 395 HALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCS 454
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ Y T+++ L K+G+ ++A K+L E + G D + ++ G G V A A
Sbjct: 455 PVL-ITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIA 513
Query: 364 ILEDLVEKG---KATTPNSWAV--------VAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
DL E G A T NS + V A F A RG + + + + +EG
Sbjct: 514 FFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLA 573
Query: 413 WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKG 467
++ K +L++L G V+ A ++ IP N Y F+ + NG G
Sbjct: 574 YEGLAKEALELLNELCSRGVVKKSSAEQVVVK--IPFN-VFYFYFLLHLLFNGLG 625
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 157/400 (39%), Gaps = 53/400 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y + + AL + + M ++ +TYN I+ +G+ ++ +VL
Sbjct: 182 TYNVLISGYCKTGEIGSAL---QLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238
Query: 193 KAKNIFPDNFSYRICINSYGARSDL-EGMEII--LREMESQPHIVLDWSTYASAAHFYIK 249
+ +PD +Y I I + S + + M+++ +R+ +P +V TY + K
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVV----TYNVLINGICK 294
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTAC------ 302
+D+A L Q + I +N ++ S G + + L ++ + C
Sbjct: 295 EGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVT 354
Query: 303 ----------KRYINR------------------DYITMLEALMKLGEHEEAEKVLKEWE 334
K I R Y +L AL K + E A + L
Sbjct: 355 FNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMV 414
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G D N ++ C +G V A IL L KG + ++ V G GKT+
Sbjct: 415 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTD 474
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQM 453
+ + ++GKG KPD ++++ L EG V + AF L + + N
Sbjct: 475 DAIKLLDE-----MKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAIT 529
Query: 454 YHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
Y++ + + + V + L M A G E + IL+
Sbjct: 530 YNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILI 569
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 134/355 (37%), Gaps = 53/355 (14%)
Query: 178 KTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDW 237
KTG+ K V+ ++ PD +Y + I+ Y ++ +L M P +V
Sbjct: 157 KTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVV--- 213
Query: 238 STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD- 296
TY + + + +A +VL + +R D I Y LI + ++L D
Sbjct: 214 -TYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDE 272
Query: 297 LEKTACK-----------------------RYINR--------DYIT---MLEALMKLGE 322
+ CK R++N + IT +L ++ G
Sbjct: 273 MRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGR 332
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SW 380
+AEK L E G S N +I C GL+ A +LE + + G TPN S+
Sbjct: 333 WMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHG--CTPNSLSY 390
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
+ K ER + + +S +G PD ++L+ L +G V +
Sbjct: 391 NPLLHALCKDKKMERAIEYLDIMVS-----RGCYPDIVTYNTLLTALCKDGKVDVAVEIL 445
Query: 441 AAL--RTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
L + P+ Y+ I + GK D +LLD MK G+ D T LV
Sbjct: 446 NQLGSKGCSPV-LITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLV 499
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 21/186 (11%)
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
L L++ GE EE K L++ G+ D ++I G C G A ++E L + G
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
++ V+ +GY G+ Q + +SV PD +IL L D G +
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLD-RMSV-------SPDVVTYNTILRTLCDSGKL 228
Query: 434 QDVEAFVAALRTVIPMNRQMYHAFIKANI-------RNGKG-VDELLDSMKADGIDEDEE 485
+ EA R M R+ Y I I +G G +LLD M+ G D
Sbjct: 229 K--EAMEVLDRQ---MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVV 283
Query: 486 TKEILV 491
T +L+
Sbjct: 284 TYNVLI 289
>gi|359487410|ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Vitis vinifera]
Length = 538
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 12/297 (4%)
Query: 101 HAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEM 160
H+ QLD F + E ++ D + TY L+ C + D F +M +
Sbjct: 175 HSGQLD-----KAFCTVED-MKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMSYL 228
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM-KAKNIFPDNFSYRICINSYGARSDLEG 219
GI ST+TYN I+ Y K +E + LTEM ++ PD F+ I +YG +E
Sbjct: 229 GIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEK 288
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
ME E + I D T+ Y KA + +K V++ ++R + +N +I
Sbjct: 289 MEKWYDEFQLM-GIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVI 347
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
++ +GN ++ + K + + Y +++ A K G ++ + +L++ E S +
Sbjct: 348 EMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVT 407
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTE 394
DT N V+ Y G V+ + LV K + P+ ++A + Y G E
Sbjct: 408 LDTPFFNCVLSAYGQAGDVERMGELF--LVMKERKCKPDNITFATMIQAYNAQGMIE 462
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 7/214 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T + + Y Q +K + + + MGI T+N ++ Y K YEK+ V+ M
Sbjct: 272 TLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFM 331
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
K + P ++ I I +G ++E ME +M+ Q P+ + TY S Y K
Sbjct: 332 KKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSI----TYCSLVSAYSK 387
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A + K +L++ E D +N ++S Y G+ + L+ + K + N
Sbjct: 388 AGYLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNIT 447
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
+ TM++A G E A+ + + N TR
Sbjct: 448 FATMIQAYNAQGMIEAAQNLEVNMITTKNKSGTR 481
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T T+ ++ + R +K F KMK G+ +++TY ++ YSK G +KV +L
Sbjct: 339 TIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSIL 398
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGME---IILREMESQPHIVLDWSTYASAAHF 246
+++ ++ D + +++YG D+E M ++++E + +P D T+A+
Sbjct: 399 RQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKP----DNITFATMIQA 454
Query: 247 YIKANLIDKASDV 259
Y +I+ A ++
Sbjct: 455 YNAQGMIEAAQNL 467
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 74/394 (18%), Positives = 144/394 (36%), Gaps = 56/394 (14%)
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
++ G L + ++ E QTY LL + +Q ++A F M G+ + Y
Sbjct: 113 KIFGLLRKQHWY------EPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVY 166
Query: 170 NDIMCLYSKTGQYEKV--------------PDV----------------------LTEMK 193
++ Y +GQ +K PDV TEM
Sbjct: 167 TALVSAYGHSGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMS 226
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
I +Y I+ YG E ME L EM + D T S Y + I
Sbjct: 227 YLGIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQI 286
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT- 312
+K + + + D +N LI Y +++ + + K KR+ + +T
Sbjct: 287 EKMEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMK---KRFYSPTIVTF 343
Query: 313 --MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++E ++G E+ E+ + + G ++ +++ Y G ++ ++IL +
Sbjct: 344 NIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIEN 403
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+ V + Y AG ER L + ++ + KPD +++ +
Sbjct: 404 SDVTLDTPFFNCVLSAYGQAGDVER-----MGELFLVMKERKCKPDNITFATMIQAYNAQ 458
Query: 431 GSV---QDVEAFVAALRTVIPMNRQMYHAFIKAN 461
G + Q++E + + ++ + F+ A+
Sbjct: 459 GMIEAAQNLEVNMITTKNKSGTRKEQFIGFVTAS 492
>gi|297736301|emb|CBI24939.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 12/297 (4%)
Query: 101 HAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEM 160
H+ QLD F + E ++ D + TY L+ C + D F +M +
Sbjct: 175 HSGQLD-----KAFCTVED-MKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMSYL 228
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM-KAKNIFPDNFSYRICINSYGARSDLEG 219
GI ST+TYN I+ Y K +E + LTEM ++ PD F+ I +YG +E
Sbjct: 229 GIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEK 288
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
ME E + I D T+ Y KA + +K V++ ++R + +N +I
Sbjct: 289 MEKWYDEFQLM-GIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVI 347
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
++ +GN ++ + K + + Y +++ A K G ++ + +L++ E S +
Sbjct: 348 EMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVT 407
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTE 394
DT N V+ Y G V+ + LV K + P+ ++A + Y G E
Sbjct: 408 LDTPFFNCVLSAYGQAGDVERMGELF--LVMKERKCKPDNITFATMIQAYNAQGMIE 462
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 7/215 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T + + Y Q +K + + + MGI T+N ++ Y K YEK+ V+ M
Sbjct: 272 TLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFM 331
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
K + P ++ I I +G ++E ME +M+ Q P+ + TY S Y K
Sbjct: 332 KKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSI----TYCSLVSAYSK 387
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A + K +L++ E D +N ++S Y G+ + L+ + K + N
Sbjct: 388 AGYLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNIT 447
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
+ TM++A G E A+ + + N TR+
Sbjct: 448 FATMIQAYNAQGMIEAAQNLEVNMITTKNKSGTRL 482
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T T+ ++ + R +K F KMK G+ +++TY ++ YSK G +KV +L
Sbjct: 339 TIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSIL 398
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGME---IILREMESQPHIVLDWSTYASAAHF 246
+++ ++ D + +++YG D+E M ++++E + +P D T+A+
Sbjct: 399 RQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKP----DNITFATMIQA 454
Query: 247 YIKANLIDKASDV 259
Y +I+ A ++
Sbjct: 455 YNAQGMIEAAQNL 467
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 70/367 (19%), Positives = 133/367 (36%), Gaps = 53/367 (14%)
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
++ G L + ++ E QTY LL + +Q ++A F M G+ + Y
Sbjct: 113 KIFGLLRKQHWY------EPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVY 166
Query: 170 NDIMCLYSKTGQYEKV--------------PDV----------------------LTEMK 193
++ Y +GQ +K PDV TEM
Sbjct: 167 TALVSAYGHSGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMS 226
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
I +Y I+ YG E ME L EM + D T S Y + I
Sbjct: 227 YLGIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQI 286
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT- 312
+K + + + D +N LI Y +++ + + K KR+ + +T
Sbjct: 287 EKMEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMK---KRFYSPTIVTF 343
Query: 313 --MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++E ++G E+ E+ + + G ++ +++ Y G ++ ++IL +
Sbjct: 344 NIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIEN 403
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+ V + Y AG ER L + ++ + KPD +++ +
Sbjct: 404 SDVTLDTPFFNCVLSAYGQAGDVER-----MGELFLVMKERKCKPDNITFATMIQAYNAQ 458
Query: 431 GSVQDVE 437
G ++ +
Sbjct: 459 GMIEAAQ 465
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 160/381 (41%), Gaps = 29/381 (7%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---CLYSKTG 180
L + E Y T ++NC+ Q A S K+ ++G +T+T N +M CL K
Sbjct: 86 LSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVK 145
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDW 237
+ + D ++ A+ SY I IN + +LR +E +P++V+
Sbjct: 146 EALRFHD---KVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVI-- 200
Query: 238 STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
Y+ K L+D+A D+ + + D + Y+ L+S + +G ++ R DL
Sbjct: 201 --YSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVG---QLNRAIDL 255
Query: 298 EKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
IN D Y +++AL K G+ +EAE VL + + D + + ++ GYC
Sbjct: 256 LNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCL 315
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
V NA+ + + + G + ++++ G + + + + K
Sbjct: 316 VNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEE-----IHQKNMV 370
Query: 415 PDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDE--- 470
PD TS++ L G + V + F L P + Y+ I A +NG +D
Sbjct: 371 PDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGH-LDRAIA 429
Query: 471 LLDSMKADGIDEDEETKEILV 491
L + MK I + T IL+
Sbjct: 430 LFNKMKDQAIRPNVYTFTILL 450
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 131/310 (42%), Gaps = 14/310 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ + D+A + +M GI+ +TY+ ++ + GQ + D+L EM
Sbjct: 201 YSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMV 260
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+NI PD ++Y I +++ ++ E +L M + + LD Y++ Y N +
Sbjct: 261 LENINPDIYTYTILVDALCKEGKVKEAENVLAVM-VKACVNLDVVVYSTLMDGYCLVNEV 319
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI--NRDYI 311
+ A V + D Y+ +I+ + E L L+ E+ K + Y
Sbjct: 320 NNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLF--EEIHQKNMVPDTVTYT 377
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++++ L K G + E G D N +I C NG + A A+ + K
Sbjct: 378 SLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKM--K 435
Query: 372 GKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+A PN ++ ++ G G+ + + + L+ KG+ + + T +++ L
Sbjct: 436 DQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLT-----KGYCLNVRTYTVMINGLCK 490
Query: 430 EGSVQDVEAF 439
EG + + A
Sbjct: 491 EGLLDEALAL 500
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 149/365 (40%), Gaps = 36/365 (9%)
Query: 61 RVGELQRIIRDLRKRKRFSQALEVSDW-MNRKGICVFAPCDHAVQL--DLIGR------- 110
++GE + IR LR+ +R+S V + M +C D A L +++G+
Sbjct: 175 KIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVV 234
Query: 111 -----VHGF-----------LSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHF 154
V GF L E N+ D TY L++ ++ + +A +
Sbjct: 235 TYSILVSGFCIVGQLNRAIDLLNEMVLENINPD---IYTYTILVDALCKEGKVKEAENVL 291
Query: 155 RKMKEMGIALSTLTYNDIM---CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
M + + L + Y+ +M CL ++ ++V +T+M + PD Y I IN
Sbjct: 292 AVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQM---GVTPDVHCYSIMINGL 348
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
++ + E+ Q ++V D TY S K+ I D+ + +R + D
Sbjct: 349 CKIKRVDEALNLFEEIH-QKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPD 407
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLK 331
I YN LI G+ + L++ K R + +L+ L K+G + A + +
Sbjct: 408 VITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQ 467
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+ G + R +I G C GL+ A A+ + + G + ++ ++ +FD
Sbjct: 468 DLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKD 527
Query: 392 KTERG 396
+ ++
Sbjct: 528 ENDKA 532
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 152/366 (41%), Gaps = 17/366 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+YG L+N + +T A+ R+++ I + + Y+ I+ K ++ D+ TEM
Sbjct: 165 SYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEM 224
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K I PD +Y I ++ + L +L EM + +I D TY K
Sbjct: 225 VGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLE-NINPDIYTYTILVDALCKEGK 283
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
+ +A +VL + D + Y+ L+ Y + + R++ T + + D
Sbjct: 284 VKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVF---YTMTQMGVTPDVHC 340
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y M+ L K+ +EA + +E DT ++I C +G + + ++++
Sbjct: 341 YSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEML 400
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
++G+ ++ + G +R AL ++ + +P+ T +L L
Sbjct: 401 DRGQPPDVITYNNLIDALCKNGHLDRAI-----ALFNKMKDQAIRPNVYTFTILLDGLCK 455
Query: 430 EGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELL---DSMKADGIDEDEE 485
G +++ +E F L +N + Y I + G +DE L M+ +G D
Sbjct: 456 VGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGL-LDEALALQSRMEDNGCISDAV 514
Query: 486 TKEILV 491
T EI++
Sbjct: 515 TFEIMI 520
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 36/368 (9%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
Y +L++ Y R ++ALS RKM E GI +S +TY+ ++ ++K G E +
Sbjct: 330 HVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKK 389
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K ++ + + Y I +Y +++ E ++REME + I Y + Y
Sbjct: 390 AKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEE-GIDAPLDIYHTMMDGYTMIR 448
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+K V K+ +E I Y LI++Y +G S+ L + + K+ ++ + Y
Sbjct: 449 NEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYS 508
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++ +KL + A V ++ G D + N +I +C G + A +++++ ++
Sbjct: 509 MLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKE 568
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQC----------------------------MKAA 403
T ++ + G+ AG+ R + M+ A
Sbjct: 569 RCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKA 628
Query: 404 LSVYVEG--KGWKPDPKVITSIL---SKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFI 458
+ + E G PD T+I+ + LGD G E F + ++ Y A +
Sbjct: 629 VEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKA--FEYFTKMRNEGLQLDVFTYEALL 686
Query: 459 KANIRNGK 466
KA ++G+
Sbjct: 687 KACCKSGR 694
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGF-------LSAESY 120
II + +ALE+ D M R G C+ P H ++G V + E
Sbjct: 580 IIHGFARAGEMRRALEIFDMMRRSG-CI--PTVHTFNALVLGLVEKRKMEKAVEILDEMA 636
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+ + DE TY T +++ Y T KA +F KM+ G+ L TY ++ K+G
Sbjct: 637 LAGVSPDEHTYTT---IMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSG 693
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ + V EM A+ I + F Y I I+ + R D+ ++++M +Q + D TY
Sbjct: 694 RMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQM-NQEGVQPDIHTY 752
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
S +I N KA D+L +A + +E+ + G + Y +L
Sbjct: 753 TS----FI--NACCKAGDML-RATKTMEEMEAAGVKPNVKTYTTL 790
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 7/242 (2%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T +T+ +++ + R + +AL F M+ G + T+N ++ + + EK ++L
Sbjct: 573 TSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEIL 632
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM + PD +Y ++ Y A D +M ++ + LD TY + K
Sbjct: 633 DEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNE-GLQLDVFTYEALLKACCK 691
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ + A V ++ + ++ YN LI +A G+ E DL + + + D
Sbjct: 692 SGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAA---DLMQQMNQEGVQPD 748
Query: 310 ---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y + + A K G+ A K ++E E +G + + +I G+ N L + A + E
Sbjct: 749 IHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFE 808
Query: 367 DL 368
+L
Sbjct: 809 EL 810
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/401 (19%), Positives = 153/401 (38%), Gaps = 52/401 (12%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E + TY ++ + + + A F+K KE L+ Y +I+ Y + ++
Sbjct: 361 EMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEA 420
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII---LREMESQPHIVLDWSTYASAA 244
++ EM+ + I Y ++ Y + E I+ L+E P ++ TY
Sbjct: 421 LVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVI----TYGCLI 476
Query: 245 HFYIKANLIDKASDVLKKAEE------------------RLEQ------------KDGIG 274
+ Y K + KA +V K + +L+ KDG+
Sbjct: 477 NMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLK 536
Query: 275 -----YNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
YN +I + +GN + + +++K C R +R ++ ++ + GE A +
Sbjct: 537 PDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERC-RPTSRTFMPIIHGFARAGEMRRALE 595
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ SG NA+++G ++ A IL+++ G + +++ + GY
Sbjct: 596 IFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYA 655
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-I 447
G T + F+ + +G + D ++L G +Q A + I
Sbjct: 656 ALGDTGKAFEYF-----TKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKI 710
Query: 448 PMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEET 486
P N +Y+ I R G +L+ M +G+ D T
Sbjct: 711 PRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHT 751
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/294 (18%), Positives = 126/294 (42%), Gaps = 8/294 (2%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY L+N +++ + A + F + + G+ + YN+I+ + G ++ ++ E
Sbjct: 505 KTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKE 564
Query: 192 MKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
M+ + P + ++ I+ + ++ +EI +M + + T+ + ++
Sbjct: 565 MQKERCRPTSRTFMPIIHGFARAGEMRRALEIF--DMMRRSGCIPTVHTFNALVLGLVEK 622
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
++KA ++L + D Y ++ YA+LG+ + + + + Y
Sbjct: 623 RKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTY 682
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+L+A K G + A V +E +T + N +I G+ G + A +++ + +
Sbjct: 683 EALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQ 742
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+G +++ AG R + M+ +E G KP+ K T+++
Sbjct: 743 EGVQPDIHTYTSFINACCKAGDMLRATKTMEE-----MEAAGVKPNVKTYTTLI 791
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 61/348 (17%), Positives = 130/348 (37%), Gaps = 42/348 (12%)
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP---- 231
Y++ G + M+A+ I P + Y I++Y D+E +R+M +
Sbjct: 304 YARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMS 363
Query: 232 ------------------------------HIVLDWSTYASAAHFYIKANLIDKASDVLK 261
H L+ Y + + Y +A +D+A +++
Sbjct: 364 LVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVR 423
Query: 262 KAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLG 321
+ EE Y+ ++ Y + N+ + L ++ K Y ++ K+G
Sbjct: 424 EMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIG 483
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+ +A +V K + G ++ + + +I G+ NA A+ ED+++ G +
Sbjct: 484 KVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYN 543
Query: 382 VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFV 440
+ + G +R +K ++ + +P + I+ G ++ +E F
Sbjct: 544 NIIKAFCGMGNMDRAIHMVKE-----MQKERCRPTSRTFMPIIHGFARAGEMRRALEIFD 598
Query: 441 AALRTVIPMNRQMYHAFIKANI--RNGKGVDELLDSMKADGIDEDEET 486
R+ ++A + + R + E+LD M G+ DE T
Sbjct: 599 MMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHT 646
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 17/309 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+ +L YV + T AL F M + G S + N ++ K G+ V +M
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
I PD F I +N++ ++ +++ME+ +P+IV TY S + Y+
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIV----TYHSLINGYVS 273
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLY---ASLGNKSEVLRLWDLEKTACKRYI 306
++ A VLK E+ ++ + Y LI Y + +VLR +++ A
Sbjct: 274 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLR--GMQEEAALVPD 331
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
R Y +++ + G+ ++A ++L E G + I N++I GYC G + AE ++
Sbjct: 332 ERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVIT 391
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+V+ S+ + GY G T F L +G +P ++L
Sbjct: 392 RMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ-----EGIEPTVLTYNTLLKG 446
Query: 427 LGDEGSVQD 435
L G+ D
Sbjct: 447 LCRVGAFDD 455
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 156/410 (38%), Gaps = 73/410 (17%)
Query: 109 GRVHGFLSAESYFSNLKDDEKTYQTY------------------GALLNCYVRQRQTDKA 150
GR+ S S +NL + +T+ + ++N + + + D+A
Sbjct: 186 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 245
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+KM+ +G+ + +TY+ ++ Y G E VL M K + + +Y + I
Sbjct: 246 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
Y + ++ E +LR M+ + +V D Y Y + ID A +L +E L
Sbjct: 306 YCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL---DEMLR-- 360
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
LG K+ + L CKR GE EAE V+
Sbjct: 361 --------------LGLKTNLFICNSLINGYCKR----------------GEIHEAEGVI 390
Query: 331 K---EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
+W L +SY N ++ GYC G A + + ++++G T ++ + G
Sbjct: 391 TRMVDWNLKPDSYSY---NTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGL 447
Query: 388 FDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVI 447
G + Q + +G PD +++L L +++ E + ++
Sbjct: 448 CRVGAFDDALQIWHLMMK-----RGVAPDEVGYSTLLDGL---FKMENFEGASTLWKDIL 499
Query: 448 PM----NRQMYHAFIKANIRNGKGV--DELLDSMKADGIDEDEETKEILV 491
+R ++ I + GK V +E+ D MK G D T L+
Sbjct: 500 ARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 123/295 (41%), Gaps = 11/295 (3%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
NLK D +Y T LL+ Y R+ T +A + KM + GI + LTYN ++ + G +
Sbjct: 397 NLKPDSYSYNT---LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 453
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
+ + M + + PD Y ++ + EG + +++ ++ T+ +
Sbjct: 454 DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARG-FTKSRITFNT 512
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTA 301
K + +A ++ K ++ DGI Y LI Y N + ++ +E+
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 572
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
I Y +++ L K E +L E + G + + A+I G+C G++ A
Sbjct: 573 ISPSIEM-YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
+ ++ E G + + + +G + G+ + M+ + G+ PD
Sbjct: 632 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD-----HGFFPD 681
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 119/281 (42%), Gaps = 8/281 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYGAL++ + ++ DKA S + +M E G++ + + + ++ + G+ ++ ++ +M
Sbjct: 614 TYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKM 673
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
FPD+ + Y A ++ + L E + ++ + Y A K
Sbjct: 674 VDHGFFPDHECFLKSDIRYAA---IQKIADSLDE-SCKTFLLPNNIVYNIAIAGLCKTGK 729
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+D A + D Y LI Y++ GN E RL D L + + Y
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT--Y 787
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++ L K + A+++ + G + N +I GYC G + A + + ++E
Sbjct: 788 NALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 847
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
+G + + +++ + G G ER + + + V+ K
Sbjct: 848 EGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSK 888
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 163/440 (37%), Gaps = 62/440 (14%)
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
KG+C D A+Q+ + G + DE Y T LL+ + + A
Sbjct: 445 KGLCRVGAFDDALQIWHLMMKRG----------VAPDEVGYST---LLDGLFKMENFEGA 491
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+ ++ + G S +T+N ++ K G+ + ++ +MK PD +YR I+
Sbjct: 492 STLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
Y S++ + ME +P I Y S K+ + + +D+L + R
Sbjct: 552 YCKASNVGQAFKVKGAMEREP-ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP 610
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAE 327
+ + Y LI + G + + E T + ++ + I TM+ L +LG +EA
Sbjct: 611 NIVTYGALIDGWCKEGMLDKAFSSY-FEMT--ENGLSANIIICSTMVSGLYRLGRIDEAN 667
Query: 328 KVLKEWELSG----------------------NSYDTR-----IPNAV-----IIGYCNN 355
++++ G +S D +PN + I G C
Sbjct: 668 LLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKT 727
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
G V +A L KG ++ + GY AG + F+ L +G P
Sbjct: 728 GKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR-----RGLVP 782
Query: 416 DPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKA--NIRNGKGVDEL 471
+ ++++ L +V + L + + P N Y+ I I N +L
Sbjct: 783 NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP-NVVTYNTLIDGYCKIGNMDAAFKL 841
Query: 472 LDSMKADGIDEDEETKEILV 491
D M +GI T L+
Sbjct: 842 KDKMIEEGISPSVVTYSALI 861
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 138/342 (40%), Gaps = 41/342 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L + R + LS F + + G+ + T + ++ K G+ K VL +
Sbjct: 302 TYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEML 361
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P Y IN Y DL+G I +M+S+ HI D TY + + K +
Sbjct: 362 VHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSR-HIRPDHITYNALINGLCKMEM 420
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN----------------KSEVLRLWD 296
I +A D++ + E+ +N LI Y G KS V+
Sbjct: 421 ITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGS 480
Query: 297 LEKTACKR------------YINRD-------YITMLEALMKLGEHEEAEKVLKEWELSG 337
+ K CK I++D Y ++++A ++ G E+A ++++ + SG
Sbjct: 481 VVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSG 540
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
S N ++ G C N + AE ++ +L +G S+ + + + G T+R
Sbjct: 541 VSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRAL 600
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
+ ++ + +P + +LS LG G V D+E
Sbjct: 601 ELLQE-----MHKYDIRPTLRTYHPLLSALGSAGRVHDMECL 637
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 12/336 (3%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYF----SN 123
+I L + + S AL+V D M +G+ AP + G V G E+ F
Sbjct: 201 VIAGLWRSGKGSDALKVFDEMVDRGV---APNQITYNTMIDGHVKGG-DLEAGFRLRDQM 256
Query: 124 LKDDEK-TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
L+D K TY LL+ R + D+ + +M + TY+ + ++TG
Sbjct: 257 LQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDS 316
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
+ + E K + ++ I +N + E +L EM +V + Y +
Sbjct: 317 RTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVL-EMLVHTGLVPTTAIYNT 375
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTA 301
+ Y + + A + ++ + R + D I YN LI+ + +E L ++EK+
Sbjct: 376 LINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSG 435
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
+ + T+++A + G+ E+ VL + + G + +V+ +C NG + A
Sbjct: 436 VDPSVET-FNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEA 494
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
AIL+D++ K + + Y ++G TE+ F
Sbjct: 495 VAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAF 530
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 51/104 (49%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
KD Q Y ++++ Y+ T++A KMK G++ S TYN ++ K Q ++
Sbjct: 504 KDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDE 563
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
+++ + + + PD SY I++ + D + +L+EM
Sbjct: 564 AEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMH 607
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 132/297 (44%), Gaps = 9/297 (3%)
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
+ DKA+ +M+ + I + +TYN ++ Y + E +++ EM K PD SY
Sbjct: 219 RLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYY 278
Query: 206 ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
+ ++ + +++ +M +++ D TY + H K D+A + L++AEE
Sbjct: 279 TVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEE 338
Query: 266 RLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDYITMLEALMKLGEH 323
R + D +GY+ ++ + G + + + K + Y +++ L + +
Sbjct: 339 RRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVT--YTSVINGLCQERKV 396
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
++A+K+L++ G +T A++ G C NG A ++ E +++V+
Sbjct: 397 DQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVL 456
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
G+ GK+ ++ + KG+ P P I ++ L E V + + F+
Sbjct: 457 MHGFRREGKSSEACDLVREMIK-----KGFFPTPVEINLLIQSLCQEEKVDEAKRFM 508
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 143/321 (44%), Gaps = 21/321 (6%)
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
SNL D+ TY T+ +L+ + D+AL R+ +E + + Y+ I+ + + G+
Sbjct: 304 SNLLPDQVTYNTFVHMLS---KHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 360
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWS 238
+K +++ EM +K PD +Y IN ++ + +LR+M +P+ V
Sbjct: 361 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTV---- 416
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
+Y + + K +A +++ +EE + I Y+ L+ + G SE DL
Sbjct: 417 SYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEAC---DLV 473
Query: 299 KTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
+ K+ + ++++L + + +EA++ +++ +G + + VI G+C
Sbjct: 474 REMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQK 533
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
++ A ++L+D+ K ++ + G+ E + L V GW P
Sbjct: 534 DDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV-----GWIP 588
Query: 416 DPKVITSILSKLGDEGSVQDV 436
P +++ + G V+D+
Sbjct: 589 TPVTYRTVIHQYCRMGRVEDL 609
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 96/228 (42%), Gaps = 9/228 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ + R+ ++ +A R+M + G + + N ++ + + ++ + +
Sbjct: 452 TYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQC 511
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+ ++ I+ + + DLE +L +M P +V TY + K
Sbjct: 512 LNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVV----TYTTIIDALGK 567
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
I++A+ + K + Y +I Y +G ++L+L LEK ++
Sbjct: 568 KGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKL--LEKMLSRQECRTA 625
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
Y ++E L G E+A K+L + + + D + +I Y + G+
Sbjct: 626 YNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGI 673
>gi|224124604|ref|XP_002319373.1| predicted protein [Populus trichocarpa]
gi|222857749|gb|EEE95296.1| predicted protein [Populus trichocarpa]
Length = 810
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 146/366 (39%), Gaps = 47/366 (12%)
Query: 117 AESYFSNLKD---DEKTYQTYGALLNCYVRQRQTDKALSHFR------------------ 155
AE+ F +D EK Y ++ Y + + DKA S F+
Sbjct: 325 AEAVFYGKRDLLGPEKGVLEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPDEVTYNSLI 384
Query: 156 -----------------KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
+M+E G LT++ +M Y++ GQ DV EM +
Sbjct: 385 QMFSGGDLMDQARDLLDEMQEAGFKPQCLTFSAVMACYARLGQLSDAVDVYQEMVKAGVK 444
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
P+ Y IN + ++E R ME + I + S Y K D A
Sbjct: 445 PNEVVYGSLINGFAEVGNVEEALKYFRMME-ESGIPANQIVLTSLIKVYSKLGCFDGAKH 503
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEV-LRLWDLEKTACKRYINRDYITMLEAL 317
+ KK ++ D I N +ISLYA LG SE L +L + ++ + TM+
Sbjct: 504 LYKKMKDLEGGPDIIASNSMISLYADLGMISEAELVFKNLRENGQADGVS--FATMMYLY 561
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
+G +EA + +E + SG D N V+ Y NG ++ +L +++ +
Sbjct: 562 KSMGMLDEAIDIAEEMKQSGLLRDCVSYNKVMACYATNGQLRECAELLHEMIGQKLLPDG 621
Query: 378 NSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG-SVQDV 436
++ ++ G G +++A Y+EGK + VITSI S +G +++
Sbjct: 622 GTFKILFTVLKKGGFPSEGIAQLESA---YLEGKPYARQA-VITSIFSVVGLHALALESC 677
Query: 437 EAFVAA 442
E+F A
Sbjct: 678 ESFTKA 683
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 137/317 (43%), Gaps = 19/317 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
YG+L+N + ++AL +FR M+E GI + + ++ +YSK G ++ + +M
Sbjct: 449 VYGSLINGFAEVGNVEEALKYFRMMEESGIPANQIVLTSLIKVYSKLGCFDGAKHLYKKM 508
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD + I+ Y + E++ + + D ++A+ + Y +
Sbjct: 509 KDLEGGPDIIASNSMISLYADLGMISEAELVFKNLRENGQA--DGVSFATMMYLYKSMGM 566
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI--NRDY 310
+D+A D+ ++ ++ +D + YN +++ YA+ G E L L + ++ + +
Sbjct: 567 LDEAIDIAEEMKQSGLLRDCVSYNKVMACYATNGQLRECAEL--LHEMIGQKLLPDGGTF 624
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG-YCNNGLVQNAEAILEDLV 369
+ L K G E L+ L G Y + AVI + GL A E
Sbjct: 625 KILFTVLKKGGFPSEGIAQLESAYLEGKPYARQ---AVITSIFSVVGLHALALESCESFT 681
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI--LSKL 427
+ A ++ V Y +G+ ++ AL +++ + +P ++TSI +
Sbjct: 682 KAEVALDSFAYNVAIYAYGSSGEIDK-------ALKTFMKRQDEGLEPDLVTSINLVHCY 734
Query: 428 GDEGSVQDVEAFVAALR 444
G G V+ V+ + L+
Sbjct: 735 GKAGMVEGVKRIYSQLK 751
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 158/399 (39%), Gaps = 78/399 (19%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y + + A F +M + G+A+ T+T+N ++ G + +L +M
Sbjct: 134 TYNTLIDLYGKAGRLKDAAEVFSEMLKSGVAMDTITFNTMIFTCGSHGLLSEAESLLDKM 193
Query: 193 KAKNIFPDNFSYRICINSYG-----------------------------------ARSDL 217
+ + I PD +Y I ++ Y R+ +
Sbjct: 194 EERRISPDTRTYNIFLSLYADAGNINAALECYWKIRNVGLVPDIVSHRTILHILCGRNMV 253
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN- 276
+E ++ EM+ + D + YI L D+A+++L K Q D +G++
Sbjct: 254 REVEAVIEEMKKSSQKI-DVHSVPGIIKMYINEGLHDRANNLLDKC-----QFD-VGFSS 306
Query: 277 ----FLISLYASLGNKSEVLRLWDLEKTACKRYINRD----------YITMLEALMKLGE 322
+I YA G LW + Y RD Y M++A K
Sbjct: 307 KVRAAIIDAYAERG-------LW--AEAEAVFYGKRDLLGPEKGVLEYNVMVKAYGKAKL 357
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
+++A + K G D N++I + L+ A +L+++ E G +++
Sbjct: 358 YDKAFSLFKGMRNHGTWPDEVTYNSLIQMFSGGDLMDQARDLLDEMQEAGFKPQCLTFSA 417
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQD-VEAF 439
V A Y G+ + A+ VY E G KP+ V S+++ + G+V++ ++ F
Sbjct: 418 VMACYARLGQ-------LSDAVDVYQEMVKAGVKPNEVVYGSLINGFAEVGNVEEALKYF 470
Query: 440 VAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMK 476
+ IP N+ + + IK + G G L MK
Sbjct: 471 RMMEESGIPANQIVLTSLIKVYSKLGCFDGAKHLYKKMK 509
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 119/289 (41%), Gaps = 26/289 (8%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
M + G+ + TY ++ +Y+K G E + + M+ + +FPD + + +
Sbjct: 1 MAKNGVLPTNNTYGMLVDVYAKAGLVEALL-WIKHMRLRGLFPDEVTMNTVVKVLKDVGE 59
Query: 217 LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY- 275
+ E + DW A + +D D E + + + +
Sbjct: 60 FDKAERFYK----------DWC----AGRVELDGLELDSMLD-----SENGSRSEPVSFK 100
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
+FL++ G + ++ D E K + Y T+++ K G ++A +V E
Sbjct: 101 HFLLTELFKTGGRVKIGGSSDEETLVRKPCLTSTYNTLIDLYGKAGRLKDAAEVFSEMLK 160
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
SG + DT N +I ++GL+ AE++L+ + E+ + ++ + + Y DAG
Sbjct: 161 SGVAMDTITFNTMIFTCGSHGLLSEAESLLDKMEERRISPDTRTYNIFLSLYADAGNINA 220
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
+C +V G PD +IL L V++VEA + ++
Sbjct: 221 ALECYWKIRNV-----GLVPDIVSHRTILHILCGRNMVREVEAVIEEMK 264
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 74/202 (36%), Gaps = 38/202 (18%)
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
T TYN ++ LY K G+ + +V +EM + D ++ I + G+
Sbjct: 132 TSTYNTLIDLYGKAGRLKDAAEVFSEMLKSGVAMDTITFNTMIFTCGSH----------- 180
Query: 226 EMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
L+ +A +L K EER D YN +SLYA
Sbjct: 181 -------------------------GLLSEAESLLDKMEERRISPDTRTYNIFLSLYADA 215
Query: 286 GNKSEVLRL-WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
GN + L W + I + T+L L E E V++E + S D
Sbjct: 216 GNINAALECYWKIRNVGLVPDI-VSHRTILHILCGRNMVREVEAVIEEMKKSSQKIDVHS 274
Query: 345 PNAVIIGYCNNGLVQNAEAILE 366
+I Y N GL A +L+
Sbjct: 275 VPGIIKMYINEGLHDRANNLLD 296
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 17/309 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+ +L YV + T AL F M + G S + N ++ K G+ V +M
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
I PD F I +N++ ++ +++ME+ +P+IV TY S + Y+
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIV----TYHSLINGYVS 273
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLY---ASLGNKSEVLRLWDLEKTACKRYI 306
++ A VLK E+ ++ + Y LI Y + +VLR +++ A
Sbjct: 274 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLR--GMQEEAALVPD 331
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
R Y +++ + G+ ++A ++L E G + I N++I GYC G + AE ++
Sbjct: 332 ERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVIT 391
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+V+ S+ + GY G T F L +G +P ++L
Sbjct: 392 RMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ-----EGIEPTVLTYNTLLKG 446
Query: 427 LGDEGSVQD 435
L G+ D
Sbjct: 447 LCRVGAFDD 455
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 155/410 (37%), Gaps = 73/410 (17%)
Query: 109 GRVHGFLSAESYFSNLKDDEKTYQTY------------------GALLNCYVRQRQTDKA 150
GR+ S S +NL + +T+ + ++N + + + D+A
Sbjct: 186 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 245
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+KM+ +G+ + +TY+ ++ Y G E VL M K + + +Y + I
Sbjct: 246 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
Y + ++ E +LR M+ + +V D Y Y + ID A +L +E L
Sbjct: 306 YCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL---DEMLR-- 360
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
LG K+ + L CKR GE EAE V+
Sbjct: 361 --------------LGLKTNLFICNSLINGYCKR----------------GEIHEAEGVI 390
Query: 331 K---EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
+W L +SY N ++ GYC G A + + ++++G T ++ + G
Sbjct: 391 TRMVDWNLKPDSYSY---NTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGL 447
Query: 388 FDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVI 447
G + Q + G PD +++L L +++ E + ++
Sbjct: 448 CRVGAFDDALQIWHLMMK-----XGVAPDEVGYSTLLDGL---FKMENFEGASTLWKDIL 499
Query: 448 PM----NRQMYHAFIKANIRNGKGV--DELLDSMKADGIDEDEETKEILV 491
+R ++ I + GK V +E+ D MK G D T L+
Sbjct: 500 ARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 122/295 (41%), Gaps = 11/295 (3%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
NLK D +Y T LL+ Y R+ T +A + KM + GI + LTYN ++ + G +
Sbjct: 397 NLKPDSYSYNT---LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 453
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
+ + M + PD Y ++ + EG + +++ ++ T+ +
Sbjct: 454 DDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILAR-GFTKSRITFNT 512
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTA 301
K + +A ++ K ++ DGI Y LI Y N + ++ +E+
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREX 572
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
I Y +++ L K E +L E + G + + A+I G+C G++ A
Sbjct: 573 ISPSIEM-YNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
+ ++ E G + + + +G + G+ + M+ + G+ PD
Sbjct: 632 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD-----HGFFPD 681
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 118/296 (39%), Gaps = 41/296 (13%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ YG L++ Y R + D A+ +M +G+ + N ++ Y K G+ + V+T
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M N+ PD++SY ++ Y RE H N
Sbjct: 393 MVDWNLKPDSYSYNTLLDGY------------CRE-----------------GHTSEAFN 423
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
L DK +E +E + YN L+ +G + L++W L Y
Sbjct: 424 LCDKM------LQEGIEPTV-LTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYS 476
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T+L+ L K+ E A + K+ G + N +I G C G + AE I + + +
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 536
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
G + ++ + GY A + F+ +K A+ E + P ++ S++S L
Sbjct: 537 GCSPDGITYRTLIDGYCKASNVGQAFK-VKGAM----EREXISPSIEMYNSLISGL 587
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 119/281 (42%), Gaps = 8/281 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYGAL++ + ++ DKA S + +M E G++ + + + ++ + G+ ++ ++ +M
Sbjct: 614 TYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKM 673
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
FPD+ + Y A ++ + L E + ++ + Y A K
Sbjct: 674 VDHGFFPDHECFLKSDIRYAA---IQKIADSLDE-SCKTFLLPNNIVYNIAIAGLCKTGK 729
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+D A + D Y LI Y++ GN E RL D L + + Y
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT--Y 787
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++ L K + A+++ + G + N +I GYC G + A + + ++E
Sbjct: 788 NALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 847
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
+G + + +++ + G G ER + + + V+ K
Sbjct: 848 EGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSK 888
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 89/440 (20%), Positives = 162/440 (36%), Gaps = 62/440 (14%)
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
KG+C D A+Q+ + G + DE Y T LL+ + + A
Sbjct: 445 KGLCRVGAFDDALQIWHLMMKXG----------VAPDEVGYST---LLDGLFKMENFEGA 491
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+ ++ + G S +T+N ++ K G+ + ++ +MK PD +YR I+
Sbjct: 492 STLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
Y S++ G ++ + I Y S K+ + + +D+L + R
Sbjct: 552 YCKASNV-GQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTP 610
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAE 327
+ + Y LI + G + + E T + ++ + I TM+ L +LG +EA
Sbjct: 611 NIVTYGALIDGWCKEGMLDKAFSSY-FEMT--ENGLSANIIICSTMVSGLYRLGRIDEAN 667
Query: 328 KVLKEWELSG----------------------NSYDTR-----IPNAV-----IIGYCNN 355
++++ G +S D +PN + I G C
Sbjct: 668 LLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKT 727
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
G V +A L KG ++ + GY AG + F+ L +G P
Sbjct: 728 GKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR-----RGLVP 782
Query: 416 DPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKA--NIRNGKGVDEL 471
+ ++++ L +V + L + + P N Y+ I I N +L
Sbjct: 783 NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP-NVVTYNTLIDGYCKIGNMDAAFKL 841
Query: 472 LDSMKADGIDEDEETKEILV 491
D M +GI T L+
Sbjct: 842 KDKMIEEGISPSVVTYSALI 861
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 144/345 (41%), Gaps = 46/345 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ ++N + + KA MK G + S +TYN I+ Y K G+ K +L EM
Sbjct: 231 TFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEM 290
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIV--------------L 235
AK I P+ ++ I I+ + ++ + + EM+ QP++V L
Sbjct: 291 VAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL 350
Query: 236 DWS-----------------TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
D + TY + + + K ++ +A ++L +R + I +N L
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410
Query: 279 ISLYASLGNKSE--VLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
I Y G + +LR L+ C Y ++ + G +EA K+ KE E +
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNV--STYNCLIVGFCREGNVKEARKLAKEMEGN 468
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV---EKGKATTPNSWAVVAAGYFDAGKT 393
G D N ++ C G + A +L+++ +KG+ ++ V+ G+ + GK
Sbjct: 469 GLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKL 528
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA 438
E + + L KG P+ + ++ ++G + D++
Sbjct: 529 EEANRLLNEMLE-----KGLIPNRTTYDILRDEMMEKGFIPDIDG 568
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 149/360 (41%), Gaps = 12/360 (3%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
+L V++ + S +++M I ++ +T++ ++ K G+++K DV+ +MKA
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
P +Y I+ Y + + +L+EM ++ I + T+ + + + A
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAK-RIHPNEITFNILIDGFCRDENVTAA 318
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
V ++ + + Q + + YN LI+ S G E L L D + Y ++
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
K +EA ++L + G + + N +I Y G + +A + +++ G
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV 436
+++ + G+ G + + L+ +EG G K D ++ L +G +
Sbjct: 439 VSTYNCLIVGFCREGNVKEARK-----LAKEMEGNGLKADLVTYNILVDALCKKGETRKA 493
Query: 437 EAFVAALRTVIPMNRQ----MYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETKEIL 490
+ + + R+ Y+ IK GK + LL+ M G+ + T +IL
Sbjct: 494 VRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 118/254 (46%), Gaps = 3/254 (1%)
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
Q A F+ + +T +YN ++ + GQ + +M +++ PD
Sbjct: 183 HQNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVE 242
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
SYRI + + +S + G +L +M ++ + V D +Y + + + + +A +L +
Sbjct: 243 SYRILMQALCRKSQVNGAVDLLEDMLNKGY-VPDALSYTTLLNSLCRKKKLREAYKLLCR 301
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTACKRYINRDYITMLEALMKLG 321
+ + D I YN +I + G + + L D+E C + Y T++ L G
Sbjct: 302 MKVKGCNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNL-VSYRTLVGGLCDQG 360
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+EA+ L+E + G S + NA+I G+CN G ++ A ++E+L++ G+A +W
Sbjct: 361 MFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEELLKHGEAPHTETWV 420
Query: 382 VVAAGYFDAGKTER 395
++ + + +R
Sbjct: 421 MMVSRICEVDDLQR 434
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 126/324 (38%), Gaps = 63/324 (19%)
Query: 168 TYNDIMCLYSKTGQ---YEKVPDVLTEMKAKN--IFPDNFSYRICINSYG-ARSDLEGME 221
+Y+ + L K G+ + + D+LT++K+KN + P FSY IN YG A + ++
Sbjct: 99 SYSSYLILILKLGRAKYFSFIDDLLTDLKSKNYPVTPTLFSY--IINIYGEANLPDKALK 156
Query: 222 IILREMESQPHIVLDWSTYASAAH-------FYIKANLIDKASDVLKKAEERLEQKDGIG 274
I + +L + S H N I A D+ K A +
Sbjct: 157 IF--------YTILKFDCNPSPKHLNGILEILVSHQNYIKPAFDLFKDAHTYDVFPNTKS 208
Query: 275 YNFLISLYASLGNKSEVLRLWD----------------LEKTACKR------------YI 306
YN LI + G S L++ L + C++ +
Sbjct: 209 YNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRILMQALCRKSQVNGAVDLLEDML 268
Query: 307 NRDYI-------TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
N+ Y+ T+L +L + + EA K+L ++ G + D N VI+G+C G
Sbjct: 269 NKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREGRAM 328
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
+A +LED+ G S+ + G D G + ++ + KG+ P V
Sbjct: 329 DACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMM-----KGFSPHFAV 383
Query: 420 ITSILSKLGDEGSVQDVEAFVAAL 443
+++ + G +++ V L
Sbjct: 384 SNALIKGFCNVGKIEEACGVVEEL 407
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 146/346 (42%), Gaps = 53/346 (15%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +LL+ Y RQR D ++M+ G+ + TY ++ S+ G KV V EMK
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245
Query: 194 AKNIFPDNFSYRICIN----------------------------SYGAR-------SDLE 218
KN+ D + Y IN +YGA +E
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIE 305
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
E++L +M+ + + + + + Y + +++KA ++ E+ + D YN L
Sbjct: 306 AAEMLLADMQLR-GVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTL 364
Query: 279 ISLYASLGNKSEVLRLWDL--EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
+ + +L + EK Y++ Y T++ K G+ EA ++ ++ E
Sbjct: 365 ACGLCRVNRMEDAKKLLHIMAEKGVAPNYVS--YTTLISIHAKEGDMVEARRLFRDMEGK 422
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE-- 394
G+ N +I GY NG ++ AE +++ +KG ++A + G+ GK +
Sbjct: 423 GSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVA 482
Query: 395 -RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
R F+ MK +G KP+ T+++S L EG + EAF
Sbjct: 483 LRLFEEMKH--------RGTKPNVVAYTALVSGLAKEGRSE--EAF 518
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 160/372 (43%), Gaps = 27/372 (7%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
+++ + + D A ++ G+ L+ YN ++ Y++ + V +L EM+ +
Sbjct: 154 VVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRG 213
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ P +Y I ++ D+ +E + EM+ + ++ D Y++ + Y + + +A
Sbjct: 214 VEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRK-NVAGDVYFYSAVINAYCRGGNVRRA 272
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGN-KSEVLRLWDLEKTACKRYINRDYI---T 312
S+V + + + Y LI+ + +G ++ + L D++ R + + I T
Sbjct: 273 SEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQ----LRGVGHNQIVFNT 328
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
M++ + G E+A ++ E G D N + G C +++A+ +L + EKG
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388
Query: 373 KATTPNSWAVVAAGYFDAG---KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
A S+ + + + G + R F+ M EGKG +P ++
Sbjct: 389 VAPNYVSYTTLISIHAKEGDMVEARRLFRDM--------EGKGSRPSVVTYNVMIDGYIK 440
Query: 430 EGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVD---ELLDSMKADGIDEDE 484
GS+++ E F + + ++P + Y + + NGK VD L + MK G +
Sbjct: 441 NGSIREAERFKKEMEKKGLVP-DIYTYAGLVHGHCVNGK-VDVALRLFEEMKHRGTKPNV 498
Query: 485 ETKEILVCTMEK 496
LV + K
Sbjct: 499 VAYTALVSGLAK 510
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
D TY T L C V + + K L H M E G+A + ++Y ++ +++K G +
Sbjct: 357 DIYTYNTLACGL-CRVNRMEDAKKLLHI--MAEKGVAPNYVSYTTLISIHAKEGDMVEAR 413
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
+ +M+ K P +Y + I+ Y + E +EME + +V D TYA H
Sbjct: 414 RLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKK-GLVPDIYTYAGLVHG 472
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
+ +D A + ++ + R + + + Y L+S A G E +L+D
Sbjct: 473 HCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYD 522
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 103/262 (39%), Gaps = 43/262 (16%)
Query: 128 EKTYQTYGALLN--C---------------------------------YVRQRQTDKALS 152
E +TYGAL+N C Y R +KAL
Sbjct: 285 EPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALE 344
Query: 153 HFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG 212
M++MGI L TYN + C + + E +L M K + P+ SY I+ +
Sbjct: 345 IKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHA 404
Query: 213 ARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
D+ + R+ME S+P +V TY YIK I +A K+ E++
Sbjct: 405 KEGDMVEARRLFRDMEGKGSRPSVV----TYNVMIDGYIKNGSIREAERFKKEMEKKGLV 460
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
D Y L+ + G LRL++ K + Y ++ L K G EEA ++
Sbjct: 461 PDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQL 520
Query: 330 LKEWELSGNSYDTRIPNAVIIG 351
+ +G + D + +V++G
Sbjct: 521 YDDMLAAGLTPDDTL-YSVLVG 541
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 154/383 (40%), Gaps = 18/383 (4%)
Query: 116 SAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCL 175
+A + + + TY TY L+ + +TD AL+ M G +TY ++
Sbjct: 138 NARRLVAAMPMEPDTY-TYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEA 196
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPH 232
K Y++ +L EM+ K PD +Y + +N ++ L+ + S +P+
Sbjct: 197 TCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPN 256
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
V +Y A + A ++ + + + + +N LIS G +
Sbjct: 257 TV----SYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAM 312
Query: 293 RLWD-LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
+ D + K C + Y +L A K + + A ++ SG D N ++
Sbjct: 313 EILDQIPKYGCTPN-SLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTA 371
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
C G V A +L L +KG S+ V G AGKTE + + ++ K
Sbjct: 372 LCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVT-----K 426
Query: 412 GWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANI--RNGKGV 468
G +PD ++I S L EG +++ ++AF I N +Y+A + R
Sbjct: 427 GLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSA 486
Query: 469 DELLDSMKADGIDEDEETKEILV 491
+L M ++G +E T IL+
Sbjct: 487 IDLFTYMVSNGCMPNESTYTILI 509
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 156/384 (40%), Gaps = 21/384 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+IR L R R AL V D M R+G CV + + L+ + G+ A ++D
Sbjct: 158 LIRGLCGRGRTDNALAVLDDMLRRG-CVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDK 216
Query: 128 --EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
TY ++N ++ + D A+ + + G +T++YN ++ ++E
Sbjct: 217 GCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDA 276
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLE-GMEII--LREMESQPHIVLDWSTYAS 242
++ EM K P+ ++ + I+ R +E MEI+ + + P+ + +Y
Sbjct: 277 EKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSL----SYNP 332
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN-KSEVLRLWDLEKTA 301
H + K +D+A ++ D + YN L++ G + V L L+
Sbjct: 333 ILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 392
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
C + Y T+++ L K G+ EEA ++L E G D + + G C G ++ A
Sbjct: 393 CTPVL-ISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEA 451
Query: 362 EAILEDLVEKGKATTPNS--WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
+ + G PN+ + + G T L Y+ G P+
Sbjct: 452 IKAFCKVQDMG--IRPNTVLYNAILLGLCKRRATHSAID-----LFTYMVSNGCMPNEST 504
Query: 420 ITSILSKLGDEGSVQDVEAFVAAL 443
T ++ L EG V++ +A L
Sbjct: 505 YTILIEGLAYEGLVKEAREMMAEL 528
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 156/375 (41%), Gaps = 17/375 (4%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+K + +TYGAL+N ++ DK +M G + + +N+++ Y K G E
Sbjct: 306 VKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIE 365
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+ M +KNI P + + + + +E E L E+ S + + Y S
Sbjct: 366 GALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY-SV 424
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTA 301
H+ K A K R + + L+ G E LW LEK +
Sbjct: 425 VHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGS 484
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
+ + ++ L G+ EA +++KE G D NA+I+G+CN G V+
Sbjct: 485 PASKVTSN--ALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGC 542
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKPDPKV 419
+ E++ ++G ++ + G + GK + A+ ++ E K G +
Sbjct: 543 FRLREEMTKRGIQPDIYTYNFLLRGLCNVGK-------LDDAIKLWDEFKASGLISNIHT 595
Query: 420 ITSILSKLGDEGSVQDVE-AFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMK 476
++ ++DVE F L + +N +Y+ IKA+ +NG +LL++MK
Sbjct: 596 YGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMK 655
Query: 477 ADGIDEDEETKEILV 491
+ GI + T L+
Sbjct: 656 SKGILPNCATYSSLI 670
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 112/256 (43%), Gaps = 3/256 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LL + D A+ + + K G+ + TY +M Y K + E V ++ E+
Sbjct: 560 TYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNEL 619
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+K + ++ Y I I ++ ++ +L M+S+ I+ + +TY+S H L
Sbjct: 620 LSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK-GILPNCATYSSLIHGVCNIGL 678
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR-DYI 311
++ A ++ + + + + Y LI Y LG W LE + + N+ Y
Sbjct: 679 VEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTW-LEMISFNIHPNKFTYT 737
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
M++ KLG E+A +L + + SG D N + G+C + NA + + + +
Sbjct: 738 VMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATE 797
Query: 372 GKATTPNSWAVVAAGY 387
G ++ + G+
Sbjct: 798 GLPVDEITYTTLVHGW 813
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 156/411 (37%), Gaps = 47/411 (11%)
Query: 30 TTLYSIISPLGNPGT--RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDW 87
TLYS++ E L+ + +G + ++ L K+ R+ A +
Sbjct: 384 VTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKM 443
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHG---FLSAESYFSNL-KDDEKTYQTYGALLNCYVR 143
M + F P D + + + G + E +F L K + T AL++
Sbjct: 444 MLSRN---FRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCG 500
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
+ +A ++M E G+ + +TYN ++ + G+ E + EM + I PD ++
Sbjct: 501 AGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYT 560
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
Y + L+ + E ++ ++ + TY Y KAN I+ ++ +
Sbjct: 561 YNFLLRGLCNVGKLDDAIKLWDEFKAS-GLISNIHTYGIMMEGYCKANRIEDVENLFNEL 619
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT----------------ACKRYIN 307
+ + + I YN +I + GN + L+L + K+ C +
Sbjct: 620 LSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLV 679
Query: 308 RD-------------------YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
D Y ++ KLG+ + AE E +S N + + V
Sbjct: 680 EDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM-ISFNIHPNKFTYTV 738
Query: 349 II-GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+I GYC G ++ A +L + E G ++ V+ G+ A + F+
Sbjct: 739 MIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFK 789
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 139/361 (38%), Gaps = 15/361 (4%)
Query: 139 NCY------VRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
NCY ++ + A + M S L ++C K G++ + ++ +
Sbjct: 420 NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRL 479
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + I+ L I++EM + + +D TY + +
Sbjct: 480 LEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLER-GLPMDRITYNALILGFCNEGK 538
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
++ + ++ +R Q D YNFL+ ++G + ++LWD K + Y
Sbjct: 539 VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGI 598
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
M+E K E+ E + E ++ + N +I +C NG V A +LE++ KG
Sbjct: 599 MMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKG 658
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
+++ + G + G E + + +G+ P+ T+++ G
Sbjct: 659 ILPNCATYSSLIHGVCNIGLVEDAKHLIDE-----MRKEGFVPNVVCYTALIGGYCKLGQ 713
Query: 433 VQDVEA-FVAALRTVIPMNRQMYHAFIK--ANIRNGKGVDELLDSMKADGIDEDEETKEI 489
+ E+ ++ + I N+ Y I + N + + LL MK GI D T +
Sbjct: 714 MDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNV 773
Query: 490 L 490
L
Sbjct: 774 L 774
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 155/375 (41%), Gaps = 15/375 (4%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+ T+ T+G LLN + + A+ F ++ +MG A S +TY I+ K G
Sbjct: 138 QPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQ 197
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAA 244
+L +M+ K PD +Y I+S EM Q P++V TY+S
Sbjct: 198 LLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVV----TYSSIL 253
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
H + +++A+ + K+ R + + + L+ G E R++++
Sbjct: 254 HGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVE 313
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y +++ + +EA+K+ G + R+ N +I G+C + + A+ +
Sbjct: 314 PDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTL 373
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
L ++ ++ +++ + G+ AG+ + + K S G PD + +L
Sbjct: 374 LSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSY-----GLLPDSITYSILL 428
Query: 425 SKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGID 481
L G + + + A++ + I + +Y+ I+ GK EL ++ GI
Sbjct: 429 DGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQ 488
Query: 482 EDEETKEILVCTMEK 496
T +++ + K
Sbjct: 489 PSVVTYTVMISGLLK 503
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 161/371 (43%), Gaps = 29/371 (7%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ + R+ ++A+ F +M + GI + +TY+ I+ + GQ + + +M
Sbjct: 214 YNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMI 273
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILR---EMESQPHIVLDWSTYASAAHFYIKA 250
+N+ P+ ++ I ++ EGM + R EM ++ + D TY++ Y
Sbjct: 274 GRNVMPNTVTFTILVDGLCK----EGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQ 329
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD- 309
+ +D +A++ + G G+ + +Y L N R + KT +RD
Sbjct: 330 SQMD-------EAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDL 382
Query: 310 ------YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
Y T+++ + G + A+K+ KE G D+ + ++ G C +G + A
Sbjct: 383 TPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFR 442
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
+L+ + E + ++ G + GK E + +++V KG +P T +
Sbjct: 443 LLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFS---NLFV--KGIQPSVVTYTVM 497
Query: 424 LSKLGDEG-SVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGI 480
+S L EG S + E F + N Y+ I+ +RNG + L++ M G
Sbjct: 498 ISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGF 557
Query: 481 DEDEETKEILV 491
D T ++L+
Sbjct: 558 SADSSTFQMLL 568
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 113/251 (45%), Gaps = 1/251 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL++ Y Q Q D+A F M G A S YN ++ + K+ + + +L+EM
Sbjct: 318 TYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEM 377
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+++ PD +Y + + + + + +EM S ++ D TY+ K
Sbjct: 378 YDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSY-GLLPDSITYSILLDGLCKHGH 436
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+D+A +LK +E + YN LI + G L+ + Y
Sbjct: 437 LDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTV 496
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
M+ L+K G EA ++ ++ ++G ++ N I G+ NG NA ++E++V +G
Sbjct: 497 MISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRG 556
Query: 373 KATTPNSWAVV 383
+ +++ ++
Sbjct: 557 FSADSSTFQML 567
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 141/338 (41%), Gaps = 42/338 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
++ ++L C ++R+ D+ALS F MK+ S+ TYN I+ + G+ E+ +L EM
Sbjct: 90 SFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS-TYNIIIDMLCLGGRVEEAYRILDEM 148
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ ++FP+ + I ++ LE I E SQ D TY S K
Sbjct: 149 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIF-ESASQRGCNPDCVTYCSLIDGLGKKGQ 207
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACK-------R 304
+D+A + +K + + + Y LI + G K + +++ +L + CK
Sbjct: 208 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNT 267
Query: 305 YIN---------------------------RDYITMLEALMKLGEHEEAEKVLKEWELSG 337
Y++ R Y ++ L K G+ E + + G
Sbjct: 268 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 327
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+ D R NAV+ G+C +G V A ILE++ EK T ++ + G + + +
Sbjct: 328 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAY 387
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
+ A S KG + + + +S++ G G + +
Sbjct: 388 MLFEEAKS-----KGIELNVVLYSSLIDGFGKVGRIDE 420
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 137/343 (39%), Gaps = 22/343 (6%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A F ++K G+ ++Y ++ + K G+ + ++ +M+A+ P ++Y I
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 210 SYGARSDLEGMEII---LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
YG+ E + LRE P +V ++ S K +D+A + + ++
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVV----SFNSILTCLGKKRKVDEALSLFEVMKKD 117
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT-MLEALMKLGEHEE 325
E YN +I + G E R+ D E + N + M++ L K + EE
Sbjct: 118 AEPNSST-YNIIIDMLCLGGRVEEAYRILD-EMEHASLFPNLLTVNIMVDRLCKARKLEE 175
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
A K+ + G + D ++I G G V A + E +++ G P + +
Sbjct: 176 AYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 235
Query: 386 GYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT 445
+F G+ E G + K + +G KPD ++ + + + G V+ +R+
Sbjct: 236 NFFIHGRKEDGHKIFKELIR-----RGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRS 290
Query: 446 --VIPMNRQ---MYHAFIKANIRNGKGVDELLDSMKADGIDED 483
+P R + H KA + + +MK G D
Sbjct: 291 YGFLPDVRSYSILIHGLTKAG--QARETSNIFHAMKQQGFALD 331
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 112/251 (44%), Gaps = 9/251 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L++ ++ Q D+A F KM + G + + Y ++ + G+ E + E+
Sbjct: 194 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 253
Query: 193 KAKNIFPDNF---SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ PD +Y C+ G ++E +I ++ S + D +Y+ H K
Sbjct: 254 IRRGCKPDLTLLNTYMDCVFKAG---EVEKGRMIFEDIRSYGFLP-DVRSYSILIHGLTK 309
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A + S++ +++ D YN ++ + G + + + K C +
Sbjct: 310 AGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT 369
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ L K+ +EA + +E + G + + +++I G+ G + A ILE+++
Sbjct: 370 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 429
Query: 370 EKGKATTPNSW 380
+KG TPN +
Sbjct: 430 KKG--LTPNVY 438
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 105/259 (40%), Gaps = 38/259 (14%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
++Y L++ + Q + + F MK+ G AL YN ++ + K+G+ K ++L E
Sbjct: 298 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 357
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
MK K + P +Y ++ L+ ++ E +S+ I L+ Y+S + K
Sbjct: 358 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSK-GIELNVVLYSSLIDGFGKVG 416
Query: 252 LIDKAS----------------------DVLKKAEERLEQ-------------KDGIGYN 276
ID+A D L KAEE E + Y+
Sbjct: 417 RIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYS 476
Query: 277 FLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
LI+ + ++ W D++K + Y TM+ L K+G +A + + ++
Sbjct: 477 ILINGLCRVQKYNKAFVFWQDMQKQGLVPNV-VTYTTMISGLAKVGNITDAYSLFERFKA 535
Query: 336 SGNSYDTRIPNAVIIGYCN 354
+G D NA+I G N
Sbjct: 536 NGGIPDAASFNALIEGMSN 554
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 156/375 (41%), Gaps = 17/375 (4%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+K + +TYGAL+N ++ DK +M G + + +N+++ Y K G E
Sbjct: 283 VKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIE 342
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+ M +KNI P + + + + +E E L E+ S + + Y S
Sbjct: 343 GALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY-SV 401
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTA 301
H+ K A K R + + L+ G E LW LEK +
Sbjct: 402 VHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGS 461
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
+ + ++ L G+ EA +++KE G D NA+I+G+CN G V+
Sbjct: 462 PASKVTSN--ALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGC 519
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK--GWKPDPKV 419
+ E++ ++G ++ + G + GK + A+ ++ E K G +
Sbjct: 520 FRLREEMTKRGIQPDIYTYNFLLRGLCNVGK-------LDDAIKLWDEFKASGLISNIHT 572
Query: 420 ITSILSKLGDEGSVQDVE-AFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMK 476
++ ++DVE F L + +N +Y+ IKA+ +NG +LL++MK
Sbjct: 573 YGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMK 632
Query: 477 ADGIDEDEETKEILV 491
+ GI + T L+
Sbjct: 633 SKGILPNCATYSSLI 647
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 112/256 (43%), Gaps = 3/256 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LL + D A+ + + K G+ + TY +M Y K + E V ++ E+
Sbjct: 537 TYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNEL 596
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+K + ++ Y I I ++ ++ +L M+S+ I+ + +TY+S H L
Sbjct: 597 LSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK-GILPNCATYSSLIHGVCNIGL 655
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR-DYI 311
++ A ++ + + + + Y LI Y LG W LE + + N+ Y
Sbjct: 656 VEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTW-LEMISFNIHPNKFTYT 714
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
M++ KLG E+A +L + + SG D N + G+C + NA + + + +
Sbjct: 715 VMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATE 774
Query: 372 GKATTPNSWAVVAAGY 387
G ++ + G+
Sbjct: 775 GLPVDEITYTTLVHGW 790
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 156/411 (37%), Gaps = 47/411 (11%)
Query: 30 TTLYSIISPLGNPGT--RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDW 87
TLYS++ E L+ + +G + ++ L K+ R+ A +
Sbjct: 361 VTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKM 420
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHG---FLSAESYFSNL-KDDEKTYQTYGALLNCYVR 143
M + F P D + + + G + E +F L K + T AL++
Sbjct: 421 MLSRN---FRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCG 477
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
+ +A ++M E G+ + +TYN ++ + G+ E + EM + I PD ++
Sbjct: 478 AGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYT 537
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
Y + L+ + E ++ ++ + TY Y KAN I+ ++ +
Sbjct: 538 YNFLLRGLCNVGKLDDAIKLWDEFKAS-GLISNIHTYGIMMEGYCKANRIEDVENLFNEL 596
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT----------------ACKRYIN 307
+ + + I YN +I + GN + L+L + K+ C +
Sbjct: 597 LSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLV 656
Query: 308 RD-------------------YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV 348
D Y ++ KLG+ + AE E +S N + + V
Sbjct: 657 EDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM-ISFNIHPNKFTYTV 715
Query: 349 II-GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+I GYC G ++ A +L + E G ++ V+ G+ A + F+
Sbjct: 716 MIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFK 766
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 139/361 (38%), Gaps = 15/361 (4%)
Query: 139 NCY------VRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
NCY ++ + A + M S L ++C K G++ + ++ +
Sbjct: 397 NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRL 456
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + I+ L I++EM + + +D TY + +
Sbjct: 457 LEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLER-GLPMDRITYNALILGFCNEGK 515
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
++ + ++ +R Q D YNFL+ ++G + ++LWD K + Y
Sbjct: 516 VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGI 575
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
M+E K E+ E + E ++ + N +I +C NG V A +LE++ KG
Sbjct: 576 MMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKG 635
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
+++ + G + G E + + +G+ P+ T+++ G
Sbjct: 636 ILPNCATYSSLIHGVCNIGLVEDAKHLIDE-----MRKEGFVPNVVCYTALIGGYCKLGQ 690
Query: 433 VQDVEA-FVAALRTVIPMNRQMYHAFIK--ANIRNGKGVDELLDSMKADGIDEDEETKEI 489
+ E+ ++ + I N+ Y I + N + + LL MK GI D T +
Sbjct: 691 MDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNV 750
Query: 490 L 490
L
Sbjct: 751 L 751
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 146/357 (40%), Gaps = 19/357 (5%)
Query: 143 RQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNF 202
R + DK L ++K G+ YN+I+ L K G+ + +L M+ +FPDN
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV 348
Query: 203 SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKK 262
Y I+ + ++ + EM + IV D TY S H K+ + +A ++ +
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRK-KIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDYITMLEALMKL 320
+ + D + Y LI Y G E + + ++K + Y + + L K
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVT--YTALADGLCKN 465
Query: 321 GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
GE + A ++L E G + N ++ G C G ++ ++E++ G ++
Sbjct: 466 GEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITY 525
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
+ Y G+ + + ++ L+ K +P +++ G ++D E +
Sbjct: 526 TTLMDAYCKMGEMAKAHELLRIMLN-----KRLQPTLVTFNVLMNGFCMSGMLEDGERLI 580
Query: 441 AAL--RTVIP----MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
+ + ++P N M IK N+R E+ +M G+ D T IL+
Sbjct: 581 EWMLEKGIMPNATTFNSLMKQYCIKNNMR---ATTEIYKAMHDRGVMPDSNTYNILI 634
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 139/333 (41%), Gaps = 16/333 (4%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--K 125
+I K S A ++ D M RK I V + + I + + A F+ + K
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKI-VPDIVTYTSVIHGICKSGKMVEAREMFNEMLVK 411
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
E TY AL++ Y + + +A S +M + G+ + +TY + K G+ +
Sbjct: 412 GLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVA 471
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
++L EM K + P+ ++Y +N ++E ++ EM+ D TY +
Sbjct: 472 NELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLA-GFYPDTITYTTLMD 530
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL--WDLEKTACK 303
Y K + KA ++L+ + Q + +N L++ + G + RL W LEK
Sbjct: 531 AYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMP 590
Query: 304 RYINRDYITMLEALMKL----GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
T +LMK ++ K G D+ N +I G+C ++
Sbjct: 591 N------ATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMK 644
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
A + +++VEKG + T ++ + G++ K
Sbjct: 645 EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKK 677
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 137/290 (47%), Gaps = 16/290 (5%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
A+ F + E+G+ +T++ N ++ + G+ + ++L +M + FPD SY + ++
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
Y +L+ + ++ E++ + + D Y + K + +A +L+ +
Sbjct: 286 GYCRIGELDKVLKLVDELKGK-GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVF 344
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEA 326
D + Y +IS + LGN S +L+D + ++ I D Y +++ + K G+ EA
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMR---RKKIVPDIVTYTSVIHGICKSGKMVEA 401
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVA 384
++ E + G D A+I GYC G ++ A ++ +V+KG TPN ++ +A
Sbjct: 402 REMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKG--LTPNVVTYTALA 459
Query: 385 AGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
G G+ + + + + KG +P+ +I++ L G+++
Sbjct: 460 DGLCKNGEIDVANELLHE-----MSRKGLQPNVYTYNTIVNGLCKIGNIE 504
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 132/314 (42%), Gaps = 21/314 (6%)
Query: 192 MKAKNIFPDNFSYRICI-----NSYGAR--SDLEGMEIILREMESQPHIVLDWSTYAS-- 242
++A+ +F Y + + N + +R + EG++I ++ E P + + W+T +
Sbjct: 188 LEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNI 247
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
H + + +A ++L + +R D + Y ++S Y +G +VL+L D K
Sbjct: 248 VLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKG 307
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+ Y ++ L K GE EAE++L+ G D + VI G+C G V A
Sbjct: 308 LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAAC 367
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
+ +++ K ++ V G +GK + L KG +PD T+
Sbjct: 368 KLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLV-----KGLEPDEVTYTA 422
Query: 423 ILSKLGDEGSVQDVEAFVAALRTV---IPMNRQMYHAFIKANIRNGK--GVDELLDSMKA 477
++ G ++ EAF + V + N Y A +NG+ +ELL M
Sbjct: 423 LIDGYCKAGEMK--EAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSR 480
Query: 478 DGIDEDEETKEILV 491
G+ + T +V
Sbjct: 481 KGLQPNVYTYNTIV 494
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 151/362 (41%), Gaps = 11/362 (3%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
ALL + R T A F +M G+A++T YN ++ + K G ++T M A
Sbjct: 150 ALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGDAALAESLMTRMDAA 209
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
+ D FS+ I Y R ++ + +RE + D T+ S H K + +
Sbjct: 210 GVPLDRFSFNTVIALY-CRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKE 268
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTACKRYINRDYITML 314
AS +L++ D + Y L+ Y G+ E ++L ++E + Y +L
Sbjct: 269 ASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVA-TYNAIL 327
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
L + G+ +E +L E + D N +I YC G + +A + ++E G
Sbjct: 328 RKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQ 387
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
++ + G+ A + + K AL + G G+ P+ V++ I+ L ++ +
Sbjct: 388 LDQFTYKALVHGFCKAKELDEA----KEAL-FEMMGAGFSPNYSVLSWIVDGLCNKNNAV 442
Query: 435 DVEAFVAAL-RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
V A L + P ++ +Y + I+ + G + + M+ G++ D L
Sbjct: 443 AVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLA 502
Query: 492 CT 493
C
Sbjct: 503 CA 504
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 9/263 (3%)
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+ TY L++ Y R ++A+ +M+ MG+ TYN I+ + G+ ++V +L
Sbjct: 285 HVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLN 344
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM + + D+ + IN+Y R D+ +++ R MES + LD TY + H + K
Sbjct: 345 EMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESG--LQLDQFTYKALVHGFCK 402
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A +D+A + L E + Y+ L + L NK+ + + + KR D
Sbjct: 403 AKELDEAKEAL---FEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPD 459
Query: 310 ---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y +++ L K G + A V E + G D + + Y G A IL
Sbjct: 460 KAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILN 519
Query: 367 DLVEKGKATTPNSWAVVAAGYFD 389
++ +K TP + + Y D
Sbjct: 520 EMAKKQLYITPQIYNCMCTSYAD 542
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 138/310 (44%), Gaps = 10/310 (3%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD- 126
++ L K + + A +V D M R G+ + +A+ L + + AES + +
Sbjct: 151 LLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAM-LHVCLKAGDAALAESLMTRMDAA 209
Query: 127 ----DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
D ++ T AL Y R+ +A+ +M+ G+ +T+N ++ K +
Sbjct: 210 GVPLDRFSFNTVIAL---YCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRV 266
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
++ +L EM + PD+ +Y ++ Y DLE + EME+ ++ +TY +
Sbjct: 267 KEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAM-GMLPGVATYNA 325
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
+ + + + +L + +ER Q D + N LI+ Y G+ + L++ +
Sbjct: 326 ILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESG 385
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+ Y ++ K E +EA++ L E +G S + + + ++ G CN
Sbjct: 386 LQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVL 445
Query: 363 AILEDLVEKG 372
AI ++L+++G
Sbjct: 446 AIPDELMKRG 455
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 132/305 (43%), Gaps = 17/305 (5%)
Query: 142 VRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDN 201
V+ + +KAL +M+ GI +TYN ++ Y + E +++ + +K PD
Sbjct: 281 VKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDK 340
Query: 202 FSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK 261
SY + +E ++ ++ +M +++ D TY + H K D A LK
Sbjct: 341 VSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLK 400
Query: 262 KAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTACKRYINRDYIT---MLEAL 317
+A+++ D +GY+ ++ + G E L D+ C N D +T +++
Sbjct: 401 EAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGC----NPDVVTYTAIVDGF 456
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTP 377
+LG +EA+K+L++ G +T A++ G C++G A ++ V + TP
Sbjct: 457 CRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMIN--VSEEHWWTP 514
Query: 378 N--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
N ++ V G GK + + KG+ P P I ++ L V +
Sbjct: 515 NAITYGAVMHGLRREGKLSEACDLTREMVE-----KGFFPTPVEINLLIQSLCQNQKVVE 569
Query: 436 VEAFV 440
+ ++
Sbjct: 570 AKKYL 574
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 139/341 (40%), Gaps = 19/341 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y A+++ + ++ + D+A S M G +TY I+ + + G+ ++ +L +M
Sbjct: 414 YSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMY 473
Query: 194 AKNIFPDNFSYRICINSY-GARSDLEGMEIILREMES--QPHIVLDWSTYASAAHFYIKA 250
P+ SY +N + LE E+I E P+ + TY + H +
Sbjct: 474 KHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAI----TYGAVMHGLRRE 529
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINR 308
+ +A D+ ++ E+ + N LI E + + L K +N
Sbjct: 530 GKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVN- 588
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
+ T++ ++G+ E A VL + LSG D A+ G + A ++ +
Sbjct: 589 -FTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKM 647
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
+ KG TP ++ V Y G+ + ++ L +P V ++ KL
Sbjct: 648 LSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLK-------RQPFRTVYNQVIEKLC 700
Query: 429 DEGSVQDVEAFVA-ALRTVIPMNRQMYHAFIKANIRNGKGV 468
D G++++ E + LRT ++ H +++ ++ G +
Sbjct: 701 DFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAI 741
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 118/304 (38%), Gaps = 15/304 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +L+ + + A R M GI + +M YS+ G+ VLT M
Sbjct: 202 VYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLM 261
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ--PHIVLDWSTYASAAHFYIKA 250
+ + P S IC + +E L+ +E I D TY S Y
Sbjct: 262 QKAGVEP---SLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDL 318
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD- 309
N I+ A +++ + D + Y ++ EV L +EK + D
Sbjct: 319 NRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCL--MEKMVWNSNLIPDQ 376
Query: 310 --YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T++ L K G ++A LKE + G D +A++ +C G + A++++ D
Sbjct: 377 VTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVID 436
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ +G ++ + G+ G+ + + ++ G KP+ T++L+ L
Sbjct: 437 MYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYK-----HGCKPNTVSYTALLNGL 491
Query: 428 GDEG 431
G
Sbjct: 492 CHSG 495
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 9/247 (3%)
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K L A VL+ R + + +++ Y+ G LR+ L + A
Sbjct: 212 KTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLS 271
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
T + L+K G+ E+A K L+ +++G D N++I GYC+ +++A ++ L
Sbjct: 272 ICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGL 331
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
KG S+ V K E +K + V PD +++ L
Sbjct: 332 PSKGCPPDKVSYYTVMGFLCKEKKIEE----VKCLMEKMVWNSNLIPDQVTYNTLIHMLS 387
Query: 429 DEGSVQDVEAFVA-ALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDE 484
G D AF+ A +++ Y A + + + G+ +DE L+ M + G + D
Sbjct: 388 KHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGR-MDEAKSLVIDMYSRGCNPDV 446
Query: 485 ETKEILV 491
T +V
Sbjct: 447 VTYTAIV 453
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 122/316 (38%), Gaps = 14/316 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y ALLN ++ +A +E + +TY +M + G+ + D+ EM
Sbjct: 483 SYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREM 542
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K FP + I S + + L E ++ ++ + + H + +
Sbjct: 543 VEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKG-CAINVVNFTTVIHGFCQIGD 601
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
++ A VL + D + Y +L+ +LG K + +L + ++ +T
Sbjct: 602 MEAALSVLDDMYLSGKHPDAVTYT---ALFDALGKKGRLDEAAELIVKMLSKGLDPTPVT 658
Query: 313 MLEALMKLGEHEEAEKVLKEWE--LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+ + + + +L E L + T + N VI C+ G ++ AE +L ++
Sbjct: 659 YRSVIHRYSQWGRVDDMLNLLEKMLKRQPFRT-VYNQVIEKLCDFGNLEEAEKLLGKVLR 717
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
N+ V+ Y G + K A ++ + PD K+ + KL +
Sbjct: 718 TASKVDANTCHVLMESYLKKGVAISAY---KVACRMF--RRNLTPDLKLCEKVSKKLVLD 772
Query: 431 GSVQDVEAFVAALRTV 446
G + VEA LR V
Sbjct: 773 GKL--VEADNLMLRFV 786
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 172/431 (39%), Gaps = 45/431 (10%)
Query: 88 MNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQ--------------- 132
M + +CVF + GRV S S SNL + + ++
Sbjct: 201 MTKFALCVFD------NMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILP 254
Query: 133 ---TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+Y ++N Y ++ + D+A + ++M+ + +TYN ++ Y G VL
Sbjct: 255 DIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVL 314
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
M K I ++ +Y + I Y R +E E ++ M + ++ +D Y H Y
Sbjct: 315 ALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCM-MEKNLFVDEHVYGVLIHAYCT 373
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN---KSEVL---RLWDLEKTACK 303
A +D A + + + + + N LI+ Y LG+ +EVL + W+L+ +
Sbjct: 374 AGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDS-- 431
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
Y T+L+ K + +A K+ E G ++ N ++ + G V++A
Sbjct: 432 ----YGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALH 487
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
I + ++G A ++ + +F G +R K ALS KG+ + ++
Sbjct: 488 IWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALS-----KGFTKSITLYNTM 542
Query: 424 LSKLGD-EGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGI 480
+ E VQ E F+ P + Y I + G V+ +L D + DGI
Sbjct: 543 ICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGI 602
Query: 481 DEDEETKEILV 491
E L+
Sbjct: 603 SSSTEMYNSLI 613
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 144/363 (39%), Gaps = 46/363 (12%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
NL DE YG L++ Y + D AL M ++G+ ++T+ N ++ Y K G
Sbjct: 356 NLFVDE---HVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHV 412
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ------------ 230
K +VL MK N+ PD++ Y ++ + + D + EM ++
Sbjct: 413 NKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTL 472
Query: 231 ----------PHIVLDWS------------TYASAAHFYIKANLIDKASDVLKKAEERLE 268
H + W+ TY + + K D+A + K A +
Sbjct: 473 LKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGF 532
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
K YN +I + + + ++ K Y T+++ K+G EA K
Sbjct: 533 TKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALK 592
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ E G S T + N++I G + +Q +L ++ K + +PN VV G
Sbjct: 593 LKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEM--KNRELSPN---VVTYGSL 647
Query: 389 DAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV 446
AG ++G M A + Y + KG P+ + + I+S L G + + + + +
Sbjct: 648 IAGWCDKGM--MDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADI 705
Query: 447 IPM 449
P+
Sbjct: 706 DPI 708
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 13/239 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+ +L + + T AL F M + G S + N ++ + G+ K V +M
Sbjct: 188 VFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQM 247
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIK 249
A I PD FSY I +N+Y ++ ++EME +P++V TY S Y+
Sbjct: 248 IALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVV----TYNSLIDGYVS 303
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYIN 307
+ A VL E+ ++ Y LI Y G + +L +EK +++
Sbjct: 304 LGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNL---FVD 360
Query: 308 RD-YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y ++ A G ++A ++ G +T I N++I GYC G V A +L
Sbjct: 361 EHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVL 419
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 149/368 (40%), Gaps = 70/368 (19%)
Query: 76 KRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD-----DEKT 130
K F++++ + + M IC F + VQ A+ F +K+ DE T
Sbjct: 530 KGFTKSITLYNTM----ICGFCKMEKLVQ------------AQEIFLKMKELGFPPDEIT 573
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEM----GIALSTLTYNDIMCLYSKTGQYEKVP 186
Y+T L++ Y + +AL K+K+M GI+ ST YN ++ ++ + +K+
Sbjct: 574 YRT---LIDGYCKVGNLVEAL----KLKDMSERDGISSSTEMYNSLITGVFRSEELQKLN 626
Query: 187 DVLTEMKAKNIFPDNFSYRICI-------------NSYGARSD-------LEGMEII--- 223
+L EMK + + P+ +Y I N+Y D + G +I+
Sbjct: 627 GLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSL 686
Query: 224 -----LREMESQPHIVLDWSTYASAAHF--YIKANL----IDKASDVLKKAEERLEQKDG 272
+ E H + D A+ AH K++L K D K + +
Sbjct: 687 YRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNN 746
Query: 273 IGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
I YN I+ N +V R+ L K C N Y +++ A +G+ EA +
Sbjct: 747 IVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPD--NYTYCSLIHACSAVGKVNEAFCLR 804
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+ +G + + NA+I G C +G + A + L KG + T ++ + GY
Sbjct: 805 DDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKG 864
Query: 391 GKTERGFQ 398
G+T +
Sbjct: 865 GRTTEALE 872
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 7/207 (3%)
Query: 142 VRQRQTDKALSHFRKMKEMGIALST-LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD 200
+R +T K + F K K M I +S + YN + K+ + V +L+++ K PD
Sbjct: 722 LRHLETQKIVDSFGK-KAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPD 780
Query: 201 NFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVL 260
N++Y I++ A + LR+ +V + Y + + K+ +D+A +
Sbjct: 781 NYTYCSLIHACSAVGKVNE-AFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLF 839
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDYITMLEALM 318
K + + YN LI Y G +E L L D E+ C I Y T++ L
Sbjct: 840 NKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSIT--YSTLIHGLY 897
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIP 345
G+ E++ +L E +G P
Sbjct: 898 MEGKSEQSVGLLNEMMKAGKGSSVMDP 924
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y AL+N + D+A F K+ G++ + +TYN ++ Y K G+ + ++ +M
Sbjct: 818 VYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKM 877
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
+ + I P + +Y I+ E +L EM
Sbjct: 878 REEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEM 912
>gi|255661154|gb|ACU25746.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 426
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 178/413 (43%), Gaps = 31/413 (7%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRV-GEL---QRIIRDLRKRKRFSQALE 83
++ T ++I+ G G + L +W++ + RV G+L +I RK + +A+
Sbjct: 8 DRYTYSTLITHFGKEGL-FDAAL-SWLQKMEQDRVPGDLVLYSNLIELSRKLCDYXKAIS 65
Query: 84 VSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT--YGALLN 139
+ + R G F P + +++ G+ F A S S ++ T T Y LL
Sbjct: 66 IFSRLKRSG---FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 140 CYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP 199
YV ++ +ALS F +M+E+ L T N ++ +Y + G ++ + M+ I P
Sbjct: 123 MYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 200 DNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
+ SY + YG ++L G I L + + +I + TY S Y K +KA+++
Sbjct: 183 NVVSYNTLLRVYG-DAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
+++ + R + + I Y+ +IS++ +G L+ ++ Y TM+ A +
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSXGVDIDQVLYQTMIVAYER 301
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG-YCNNGLVQNAEAILEDLVEKGKA---T 375
G A+++L E + N IP + I G ++ A + ++ G+ T
Sbjct: 302 AGLVAHAKRLLHELKRPDN-----IPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDIT 356
Query: 376 TPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
+ + Y G F M+ G G+ PD VI +L+ G
Sbjct: 357 VFERMIHLFSKYKKYGNVVEVFDKMR--------GLGYFPDSNVIALVLNAYG 401
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 17/309 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+ +L YV + T AL F M + G S + N ++ K G+ V +M
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
I PD F I +N++ ++ +++ME+ +P+IV TY S + Y+
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIV----TYHSLINGYVS 239
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLY---ASLGNKSEVLRLWDLEKTACKRYI 306
++ A VLK E+ ++ + Y LI Y + +VLR +++ A
Sbjct: 240 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLR--GMQEEAALVPD 297
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
R Y +++ + G+ ++A ++L E G + I N++I GYC G + AE ++
Sbjct: 298 ERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVIT 357
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+V+ S+ + GY G T F L +G +P ++L
Sbjct: 358 RMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ-----EGIEPTVLTYNTLLKG 412
Query: 427 LGDEGSVQD 435
L G+ D
Sbjct: 413 LCRVGAFDD 421
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 156/410 (38%), Gaps = 73/410 (17%)
Query: 109 GRVHGFLSAESYFSNLKDDEKTYQTY------------------GALLNCYVRQRQTDKA 150
GR+ S S +NL + +T+ + ++N + + + D+A
Sbjct: 152 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 211
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
+KM+ +G+ + +TY+ ++ Y G E VL M K + + +Y + I
Sbjct: 212 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 271
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
Y + ++ E +LR M+ + +V D Y Y + ID A +L +E L
Sbjct: 272 YCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL---DEMLR-- 326
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
LG K+ + L CKR GE EAE V+
Sbjct: 327 --------------LGLKTNLFICNSLINGYCKR----------------GEIHEAEGVI 356
Query: 331 K---EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
+W L +SY N ++ GYC G A + + ++++G T ++ + G
Sbjct: 357 TRMVDWNLKPDSYSY---NTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGL 413
Query: 388 FDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVI 447
G + Q + +G PD +++L L +++ E + ++
Sbjct: 414 CRVGAFDDALQIWHLMMK-----RGVAPDEVGYSTLLDGL---FKMENFEGASTLWKDIL 465
Query: 448 PM----NRQMYHAFIKANIRNGKGV--DELLDSMKADGIDEDEETKEILV 491
+R ++ I + GK V +E+ D MK G D T L+
Sbjct: 466 ARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 515
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 123/295 (41%), Gaps = 11/295 (3%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
NLK D +Y T LL+ Y R+ T +A + KM + GI + LTYN ++ + G +
Sbjct: 363 NLKPDSYSYNT---LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 419
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
+ + M + + PD Y ++ + EG + +++ ++ T+ +
Sbjct: 420 DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILAR-GFTKSRITFNT 478
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTA 301
K + +A ++ K ++ DGI Y LI Y N + ++ +E+
Sbjct: 479 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 538
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
I Y +++ L K E +L E + G + + A+I G+C G++ A
Sbjct: 539 ISPSIEM-YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 597
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
+ ++ E G + + + +G + G+ + M+ + G+ PD
Sbjct: 598 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD-----HGFFPD 647
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 103/242 (42%), Gaps = 8/242 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYGAL++ + ++ DKA S + +M E G++ + + + ++ + G+ ++ ++ +M
Sbjct: 580 TYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKM 639
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
FPD+ + Y A ++ + L E + ++ + Y A K
Sbjct: 640 VDHGFFPDHECFLKSDIRYAA---IQKIADSLDE-SCKTFLLPNNIVYNIAIAGLCKTGK 695
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+D A + D Y LI Y++ GN E RL D L + + Y
Sbjct: 696 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT--Y 753
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++ L K + A+++ + G + N +I GYC G + A + + ++E
Sbjct: 754 NALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 813
Query: 371 KG 372
+G
Sbjct: 814 EG 815
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 92/446 (20%), Positives = 175/446 (39%), Gaps = 37/446 (8%)
Query: 51 DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLI 108
D ++ G + V +++ L + F AL++ M ++G+ AP ++ LD +
Sbjct: 392 DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGV---APDEVGYSTLLDGL 448
Query: 109 GRVHGFLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
++ F A + + ++ + K+ T+ +++ + + +A F KMK++G +
Sbjct: 449 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 508
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
+TY ++ Y K + V M+ + I P Y I+ L + +L E
Sbjct: 509 ITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTE 568
Query: 227 MESQ---PHIVLDWSTYASAAHFYIKANLIDKA-SDVLKKAEERLEQKDGIGYNFLISLY 282
M + P+IV TY + + K ++DKA S + E L I + LY
Sbjct: 569 MGIRGLTPNIV----TYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLY 624
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLG-EHEEAEKVLKEWELSGNSY- 340
LG E L ++ ++ + E +K + +K+ + S ++
Sbjct: 625 -RLGRIDEANLLM-------QKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFL 676
Query: 341 --DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ + N I G C G V +A L KG ++ + GY AG + F+
Sbjct: 677 LPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFR 736
Query: 399 CMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHA 456
L +G P+ ++++ L +V + L + + P N Y+
Sbjct: 737 LRDEMLR-----RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP-NVVTYNT 790
Query: 457 FIKA--NIRNGKGVDELLDSMKADGI 480
I I N +L D M +GI
Sbjct: 791 LIDGYCKIGNMDAAFKLKDKMIEEGI 816
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 122/285 (42%), Gaps = 14/285 (4%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
LL+ + R +TD F+ M G + TYN ++ K G E + EMK +
Sbjct: 103 GLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFR 162
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANL 252
+ PD +Y I+ YG L+ EM+S +P ++ TY + + + K
Sbjct: 163 GLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVI----TYNTLINCFCKFGK 218
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYI 311
+ K + ++ ++ + + + Y+ L+ + + L+ + D+ + Y
Sbjct: 219 LPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPN-EHTYT 277
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++++A K+G +A ++ E G ++ A+I G C+ ++ AE + +V
Sbjct: 278 SLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTA 337
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
G S+ + G+ A +R + + ++G+G KPD
Sbjct: 338 GVIPNLASYTALIHGFVKAKNMDRALELLDE-----MKGRGIKPD 377
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 135/359 (37%), Gaps = 50/359 (13%)
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+ + AL + + + ++AL F KMK + T + N ++ +++ G+ + +
Sbjct: 63 FGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFK 122
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+M P F+Y I I+ D+E + EM+ + ++ D TY S Y K
Sbjct: 123 DMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRG-LIPDTVTYNSMIDGYGKV 181
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+D ++ + + D I YN LI+ + G + L +
Sbjct: 182 GRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFF--------------- 226
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+E + SG + + ++ +C ++Q A D+
Sbjct: 227 --------------------REMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRR 266
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G +++ + Y G F+ V VE W + T+++ L D
Sbjct: 267 LGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVE---W--NVVTYTALIDGLCDV 321
Query: 431 GSVQDVEAFVAALRT--VIPMNRQMY----HAFIKANIRNGKGVDELLDSMKADGIDED 483
+++ E + T VIP N Y H F+KA +N ELLD MK GI D
Sbjct: 322 ERIKEAEELFGKMVTAGVIP-NLASYTALIHGFVKA--KNMDRALELLDEMKGRGIKPD 377
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 138/335 (41%), Gaps = 37/335 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+NC+ + + K L FR+MK+ G+ + ++Y+ ++ + K ++ +M
Sbjct: 205 TYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDM 264
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + P+ +Y +++Y +L + EM + ++W+ A L
Sbjct: 265 RRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMS---QVGVEWNVVTYTA-------L 314
Query: 253 IDKASDV--LKKAEERLEQKDGIG-------YNFLISLYASLGNKSEVLRLWDLEKTACK 303
ID DV +K+AEE + G Y LI + N L L D K
Sbjct: 315 IDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMK---G 371
Query: 304 RYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
R I D Y T + +L L + E A+ V+ E + G +T I ++ Y +
Sbjct: 372 RGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSE 431
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAG------------YFDAGKTERGFQCMKAALSVYV 408
+LE+++E T ++ V+ G YF + G Q A + +
Sbjct: 432 GLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMI 491
Query: 409 EGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
+G + + T++ ++ +G V D A+ + +
Sbjct: 492 DGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLI 526
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 119/298 (39%), Gaps = 44/298 (14%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY +++C ++ + A F +MK G+ T+TYN ++ Y K G+ +
Sbjct: 132 TVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFF 191
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMES---QPHIVLDWSTYASAAH 245
EMK+ + PD +Y IN + L +G+E REM+ +P++V +Y++
Sbjct: 192 EEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEF-FREMKQSGLKPNVV----SYSTLVD 246
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
+ K +++ +A + Y L+ Y +GN S+ RL D +
Sbjct: 247 AFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEW 306
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSG-----NSYDTRI---------------- 344
Y +++ L + +EAE++ + +G SY I
Sbjct: 307 NVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELL 366
Query: 345 ---------PNAVIIG-----YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
P+ ++ G C ++ A+ ++ ++ EKG + + YF
Sbjct: 367 DEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYF 424
>gi|356533844|ref|XP_003535468.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 813
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 156/365 (42%), Gaps = 46/365 (12%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TY L++ Y + Q +A F KM + G+A +T+T+N ++ + GQ E+V ++ +
Sbjct: 274 HTYNTLIDTYGKAGQLKEASETFAKMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLVRK 333
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ P+ +Y I I+ Y D+ GM E+ + + D +Y + + Y
Sbjct: 334 MEELRCSPNTRTYNILISLYAKHDDI-GMATKYFEIMKEACLEPDLVSYRTLLYAYSIRK 392
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
++ +A +++K+ +ER + D + L +Y G + L LW L + Y
Sbjct: 393 MVGEAEELVKEMDERRLEIDQYTQSALTRMYIKAGMLDQSL-LWFLRFHVAGNMTSECYA 451
Query: 312 TMLEALMKLGEHEEAEKVL------------------------KEWELSGNSYDTRIPNA 347
++A + G EAEKV K +E + +D+ +
Sbjct: 452 ASIDAYGEHGHTLEAEKVFIWSQKQKNLSVLEFNVMIKAYGIGKCYEKACQLFDSMEQHG 511
Query: 348 VIIGYCN-NGLVQ---------NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
V+ C+ L+Q A+ L+ + E G + + VV + G+ E
Sbjct: 512 VVADRCSYTSLIQILTTSDQPHMAKPYLKKMQEAGLVSDCIPYCVVICSFAKLGQLE--- 568
Query: 398 QCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMY 454
A +Y E G +PD V + +++ D G V++ ++V ++ +P N +Y
Sbjct: 569 ----MAEDIYWEMIRHGVQPDVIVYSILINVFSDAGRVKEAISYVDEMKKAGLPGNTVIY 624
Query: 455 HAFIK 459
++ IK
Sbjct: 625 NSLIK 629
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 34/269 (12%)
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
Q + D+AL F + G L+T+ YN ++ + Q+ +V + EM A+ I +
Sbjct: 129 QLRWDRALEIFEWFNKKGHELNTIHYNIMLRSLGRARQWRRVESLWNEMNARGIAATCST 188
Query: 204 YRICINSY--GARSD--LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
Y I+ Y G R D L ++++L + QP D T Y KA KA +
Sbjct: 189 YGTLIDVYSKGGRRDDALSWLDMMLGQ-GVQP----DEVTMVIVVQLYKKAGEFQKAEEF 243
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR--YINRDYITMLEAL 317
KK SLGN + + L E+ C + + Y T+++
Sbjct: 244 FKK--------------------WSLGNDNAMATLELDERVVCANASFGSHTYNTLIDTY 283
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI---LEDLVEKGKA 374
K G+ +EA + + G + T N +I N+G ++ + +E+L
Sbjct: 284 GKAGQLKEASETFAKMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLVRKMEELRCSPNT 343
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAA 403
T N + A + D G + F+ MK A
Sbjct: 344 RTYNILISLYAKHDDIGMATKYFEIMKEA 372
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 137/346 (39%), Gaps = 58/346 (16%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY 131
L+++ R+ +ALE+ +W N+KG H + +H
Sbjct: 126 LKEQLRWDRALEIFEWFNKKG--------HE-----LNTIH------------------- 153
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
Y +L R RQ + S + +M GIA + TY ++ +YSK G+ + L
Sbjct: 154 --YNIMLRSLGRARQWRRVESLWNEMNARGIAATCSTYGTLIDVYSKGGRRDDALSWLDM 211
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE-----------MESQPHIVLDWSTY 240
M + + PD + I + Y + + E ++ +E +V +++
Sbjct: 212 MLGQGVQPDEVTMVIVVQLYKKAGEFQKAEEFFKKWSLGNDNAMATLELDERVVCANASF 271
Query: 241 ASAAH-----FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV-LRL 294
S + Y KA + +AS+ K ++ + +N +I++ + G EV L +
Sbjct: 272 GSHTYNTLIDTYGKAGQLKEASETFAKMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLV 331
Query: 295 WDLEKTACKRYINRDYITMLEALMK---LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
+E+ C R Y ++ K +G + +++KE L + R ++
Sbjct: 332 RKMEELRCSPN-TRTYNILISLYAKHDDIGMATKYFEIMKEACLEPDLVSYR---TLLYA 387
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
Y +V AE +++++ E+ + + + Y AG ++
Sbjct: 388 YSIRKMVGEAEELVKEMDERRLEIDQYTQSALTRMYIKAGMLDQSL 433
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 23/223 (10%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y L+N + + +A+S+ +MK+ G+ +T+ YN ++ LY+K EK + +
Sbjct: 588 VYSILINVFSDAGRVKEAISYVDEMKKAGLPGNTVIYNSLIKLYAKIDNLEKAQEAYKLL 647
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P+ +S I+ Y +S + + I ++ + T+A Y K
Sbjct: 648 QLSEEGPNVYSSNCMIDLYVKQSMVGQAKQIFDTLKKNGGA--NEFTFAMMLCLYKKIER 705
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW------DLEKTACK--- 303
D+A + K+ +L + YN ++ LYA G E + + ++ C
Sbjct: 706 FDEAIQIAKQI-RKLGPLTELSYNNVLDLYAIAGRPKEAIETFKEMVRASIQVNDCSLRS 764
Query: 304 ------RY-INRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
RY ++R + LEAL+K ++A L+ W L+ +S
Sbjct: 765 LGNLLLRYGVSRLAVGKLEALVK----KDASNGLQAWMLALSS 803
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 145/335 (43%), Gaps = 40/335 (11%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T T+ L++ R++ + A S +KM G+ +TYN +M K G+ ++ +L
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210
Query: 190 TEMKAKNIFPD-----NFSYRICINS--YGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
MKA PD +F Y +C + A LE M R+ P++V TY +
Sbjct: 211 ERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM----RDSHHDPNVV----TYNT 262
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDG-----IGYNFLISLYASLGNKSEVLRLWDL 297
K+ ID A +++ E++ DG +GY+ ++ LG E + +
Sbjct: 263 ILDGLCKSGKIDTALEMM----EQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
A R Y +++ L K G+ EEA + ++E + G + +++ G C+ G
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR 378
Query: 358 VQNAEAILEDLVEKGKAT-----TPNSWAVVAAGYFDAGKTE---RGFQCMKAALSVYVE 409
+ AE ++E++ G + +++ + G AG+ + + FQ M++
Sbjct: 379 LAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS------- 431
Query: 410 GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
+G PD ++I+ L G E ++ +R
Sbjct: 432 -QGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 142/336 (42%), Gaps = 29/336 (8%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
M G +++T+N ++ +SK G+ +L M A++I P+ SY +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 217 LEGMEIILREMESQ-PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
E ++R+M S+ D TY++ Y KA ++++ ++LK+ R + D + Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 276 NFLI-SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
++ SL S + L ++ + C + + T++ + E A+ +L++
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLI-TFNTLISGCCREKNLEMADSLLQKMA 179
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
SG D N ++ G C G +Q AE +LE + G A +++ G +GK
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKLGDEGSVQDVEAFVAALRTVIPMNRQ 452
Q V + + DP V+T +IL L G + T + M Q
Sbjct: 240 DAHQ-------VLEQMRDSHHDPNVVTYNTILDGLCKSGKID----------TALEMMEQ 282
Query: 453 MYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKE 488
M + +G G++ + S DG+ + T+E
Sbjct: 283 MASS-------DGCGLNVVGYSTVVDGLCKLGRTQE 311
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 155/375 (41%), Gaps = 19/375 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
I+R L + QA+EV D M ++ C + + ++ R G A ++D
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRD-CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDR 268
Query: 128 EKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
T TY L+N ++ + D+A+ M G + +T+N I+ TG++
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI-ILREME---SQPHIVLDWSTYA 241
+L +M K P ++ I IN + R L G I IL +M QP+ + +Y
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILIN-FLCRKGLLGRAIDILEKMPKHGCQPNSL----SYN 383
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKT 300
H + K +D+A + L++ R D + YN +++ G + + + + L
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
C + Y T+++ L K G+ +A K+L E DT ++++ G G V
Sbjct: 444 GCSPVL-ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
A + G ++ + G +T+R + VY+ +G KP
Sbjct: 503 AIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFL-----VYMINRGCKPTETSY 557
Query: 421 TSILSKLGDEGSVQD 435
T ++ L EG ++
Sbjct: 558 TILIEGLAYEGMAKE 572
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 159/385 (41%), Gaps = 24/385 (6%)
Query: 114 FLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
FL Y N+ D L+ + R +T KA ++ G +TYN ++
Sbjct: 124 FLENMVYHGNVPD----IIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMI 179
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPH 232
Y K G+ VL M ++ PD +Y + S L + ME++ R ++ +
Sbjct: 180 SGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
D TY + + + +A +L + +R D + YN L++ G E +
Sbjct: 237 P--DVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 293 R-LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
+ L D+ + C+ + I +L ++ G +AEK+L + G S N +I
Sbjct: 295 KFLNDMPSSGCQPNVITHNI-ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
C GL+ A ILE + + G S+ + G+ K +R + ++ +S +
Sbjct: 354 LCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS-----R 408
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT-----VIPMNRQMYHAFIKANIRNGK 466
G PD ++L+ L +G V+D + L + V+ + KA + GK
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG-KTGK 467
Query: 467 GVDELLDSMKADGIDEDEETKEILV 491
+ +LLD M+A + D T LV
Sbjct: 468 AI-KLLDEMRAKDLKPDTITYSSLV 491
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 79/182 (43%), Gaps = 13/182 (7%)
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
L L++ GE EE K L+ GN D +I G+C G + A ILE L G
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
++ V+ +GY AG+ + ALSV ++ PD +IL L D G +
Sbjct: 169 VPDVITYNVMISGYCKAGE-------INNALSV-LDRMSVSPDVVTYNTILRSLCDSGKL 220
Query: 434 -QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETKEI 489
Q +E L+ + Y I+A R+ GV + LLD M+ G D T +
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRD-SGVGQAMKLLDEMRDRGCTPDVVTYNV 279
Query: 490 LV 491
LV
Sbjct: 280 LV 281
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 99/233 (42%), Gaps = 24/233 (10%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y LL+ + ++++ D+A+ + +M G +TYN ++ K G+ E ++L ++
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEI-ILREMESQPHIVLDWSTYASAAHFYIKAN 251
+K P +Y I+ A++ G I +L EM ++ + D TY+S +
Sbjct: 441 SSKGCSPVLITYNTVIDGL-AKAGKTGKAIKLLDEMRAK-DLKPDTITYSSLVGGLSREG 498
Query: 252 LIDKASDVLKKAEERLEQKDGIGYN-FLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+D+A + E + + + +N ++ L + + L + CK Y
Sbjct: 499 KVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKP-TETSY 557
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
++E L G +EA ++L E CN GL++ + A
Sbjct: 558 TILIEGLAYEGMAKEALELLNEL-------------------CNKGLMKRSSA 591
>gi|224073298|ref|XP_002304067.1| predicted protein [Populus trichocarpa]
gi|222841499|gb|EEE79046.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 130/280 (46%), Gaps = 6/280 (2%)
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
KAL +++ G+ + ++ Y ++ + + + E+ +MK + P+ + Y +
Sbjct: 9 KALDLVQELNYNGLQMDSVMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIYHYSSLL 68
Query: 209 NSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
N+Y + + + E ++++M+S +V + + Y++ L +K+ D+L + +
Sbjct: 69 NAYASGGNYKKAEELVQDMKSSG-LVPNKVMLTTQLKVYVRGRLFEKSRDLLVELDTLGF 127
Query: 269 QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
KD + Y L+ A G E +++ K C + Y M+ + + G EEA++
Sbjct: 128 AKDEMPYCLLMDGLAKTGCIDEARSVFNEMKEKCVKPGGYSYSIMISSFCRGGLFEEAKE 187
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ +E+E + YD I NA++ YC G +++ + + E + N++ ++ +
Sbjct: 188 LAEEFEAKYDKYDVAISNAILCAYCRAGEMESVMRTMRKMDELAISPDYNTFHILIKYFC 247
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
+Q M+ + KG +P ++ +S+L LG
Sbjct: 248 KEKLYMLAYQTMED-----MHRKGHQPAEELCSSLLFHLG 282
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%)
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI 197
L YVR R +K+ ++ +G A + Y +M +KTG ++ V EMK K +
Sbjct: 103 LKVYVRGRLFEKSRDLLVELDTLGFAKDEMPYCLLMDGLAKTGCIDEARSVFNEMKEKCV 162
Query: 198 FPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
P +SY I I+S+ E + + E E++
Sbjct: 163 KPGGYSYSIMISSFCRGGLFEEAKELAEEFEAK 195
>gi|413936133|gb|AFW70684.1| hypothetical protein ZEAMMB73_229858 [Zea mays]
Length = 375
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 119/260 (45%), Gaps = 4/260 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T +N R+ K + KM + G + +TYN I+ + G + ++L+ M
Sbjct: 82 TLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAIIGGLCEQGNVDSALELLSNM 141
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ PD +Y + + E E ++ +M SQ + D ST+ + F+ + L
Sbjct: 142 QSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKM-SQNDRLRDNSTFNTIISFWCQKGL 200
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY-INRDYI 311
I +A +V K+ E+ + Y+ +I + L L L + A K + ++ Y+
Sbjct: 201 ILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQALEL--LNEMANKGFNTDKMYL 258
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+ ++L K + EE +V+ + + SG S T + N V++G C NG A +L D+V
Sbjct: 259 VLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSC 318
Query: 372 GKATTPNSWAVVAAGYFDAG 391
G +++ ++ G F G
Sbjct: 319 GCMPDESTYIILIEGLFYEG 338
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 146/340 (42%), Gaps = 14/340 (4%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
M+ G + +TYN I+ + G ++ ++L + +++ P+ +Y + + +
Sbjct: 1 MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIER 60
Query: 217 LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
IL E+ S+ + + +T + + L+ K + L+K + + + YN
Sbjct: 61 WVDANEILDEVVSE-NCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYN 119
Query: 277 FLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
+I GN L L +++ CK I Y T+L+ L E+AE+++ +
Sbjct: 120 AIIGGLCEQGNVDSALELLSNMQSFGCKPDI-VTYNTVLKGLCSADRWEDAEELMIKMSQ 178
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
+ D N +I +C GL+ A + + + EKG +++ + G A K E+
Sbjct: 179 NDRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQ 238
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMY 454
+ + + KG+ D K+ + L E +++V V L+ + I +Y
Sbjct: 239 ALELLNE-----MANKGFNTD-KMYLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLY 292
Query: 455 HAFIKANIRNGK---GVDELLDSMKADGIDEDEETKEILV 491
+ + RNGK +D L D M + G DE T IL+
Sbjct: 293 NTVLLGLCRNGKTNYAIDVLAD-MVSCGCMPDESTYIILI 331
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 182/449 (40%), Gaps = 44/449 (9%)
Query: 56 NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGI-------C--VFAPC---DHAV 103
+G + V IR L K +R +A+E+ + ++ KG+ C V C +
Sbjct: 244 SGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEA 303
Query: 104 QLDLIGRV--HGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
+++ + GF+ +E+ SNL D + G+ A K+K+ G
Sbjct: 304 GEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGS-------------AFDLVNKVKKFG 350
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
+A S YN ++ K G+ ++ + M K +FP++ +Y I I+S+ R L+
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
L +M ++ I Y+S + K + A + + + + + Y LIS
Sbjct: 411 HFLGKM-TEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINR-DYITMLEALMKLGEHEEAEKV---LKEWELSG 337
Y G RL+ E T N + ++ L EA K+ + EW +
Sbjct: 470 YCKEGELHNAFRLYH-EMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
N N +I G+C G A +L+++VEKG ++ + +G G+
Sbjct: 529 NEVTY---NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHA 456
+ M ++G+ K + +++L EG + D ++A L + M+ Y
Sbjct: 586 EFMND-----LQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSV 640
Query: 457 FIKANIR--NGKGVDELLDSMKADGIDED 483
I +R + + + +LL M G+ D
Sbjct: 641 LIYGILRQQDRRSIIDLLKQMHDQGLRPD 669
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 173/429 (40%), Gaps = 44/429 (10%)
Query: 7 LSTNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQ 66
+S NT A+ S + NR+ + ++ E+ W N+V L
Sbjct: 491 ISPNTYTFTALISGLCHANRMAE-------------ANKLFGEMVEWNVIPNEVTYNVL- 536
Query: 67 RIIRDLRKRKRFSQALEVSDWMNRKGIC----VFAPCDHAVQLDLIGRVHGFLSAESYFS 122
I K +A E+ D M KG+ + P L GRV A + +
Sbjct: 537 --IEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISG--LCSTGRVS---EAREFMN 589
Query: 123 NLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+L+ +++ + ALL+ Y ++ + D AL R+M G+A+ + Y+ ++ +
Sbjct: 590 DLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQ 649
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE---GMEIILREMESQPHIVLDW 237
+ D+L +M + + PDN Y I++ +L+ G+ I+ P++V
Sbjct: 650 DRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVV--- 706
Query: 238 STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD- 296
TY + + K L+DKA + ++ + Y + S GN + ++L D
Sbjct: 707 -TYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDV 765
Query: 297 -LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
LE Y ++ KLG +EA +VL SG S D + +I YC
Sbjct: 766 LLEGFLANTVT---YNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRR 822
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
G ++ A + E ++ +G ++ + G G+ + F+ + +G KP
Sbjct: 823 GDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMR-----RGVKP 877
Query: 416 DPKVITSIL 424
+ S++
Sbjct: 878 NRATYNSLI 886
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 131/322 (40%), Gaps = 12/322 (3%)
Query: 117 AESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
AES F+N+ K TY L++ + ++ + D AL KM E+GI + Y+ ++
Sbjct: 374 AESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLIS 433
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
+ K G+ + EM A + P+ Y I+ Y +L + EM + I
Sbjct: 434 GHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG-IS 492
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
+ T+ + AN + +A+ + + E + + YN LI + GN L
Sbjct: 493 PNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFEL 552
Query: 295 WD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
D +EK Y ++ L G EA + + + + + +A++ GY
Sbjct: 553 LDEMVEKGLVPD--TYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGY 610
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
C G + +A +++ +G A ++V+ G +K + +G
Sbjct: 611 CKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQ-----MHDQG 665
Query: 413 WKPDPKVITSILSKLGDEGSVQ 434
+PD + T+++ G+++
Sbjct: 666 LRPDNVLYTTMIDANAKAGNLK 687
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 143/361 (39%), Gaps = 49/361 (13%)
Query: 130 TYQTYGALLNCYVRQRQTDK-------------------------------------ALS 152
T Q + A++ Y R + D AL
Sbjct: 60 TVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALE 119
Query: 153 HFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG 212
++++ G+ +TYN ++ S+ + V EM A PD ++Y ++ +G
Sbjct: 120 LLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHG 179
Query: 213 ARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
+ E++ +E+ QP D TY S + + K +++ V ++ + +
Sbjct: 180 RCGKAQEAELMFKELVEKGFQP----DAVTYNSLLYAFAKEGDVERVERVCEELVKAGFR 235
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
KDGI YN +I +Y +G L L+D + Y ++++L K+ EA KV
Sbjct: 236 KDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKV 295
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
L+E +G +A+I Y +G +AE + +VE G ++ V+ +
Sbjct: 296 LEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFAR 355
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM 449
+ +T + +A + G+KPD + +L+ L ++E + + V M
Sbjct: 356 SDETRKLMVLYRAMIK-----DGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEM 410
Query: 450 N 450
N
Sbjct: 411 N 411
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 163/404 (40%), Gaps = 34/404 (8%)
Query: 114 FLSAESYFSNLKDDEKTYQ------------TYGALLNCYVRQRQTDKALSHFRKMKEMG 161
+SA S SNL D ++ TY A+++ + R + +A F+++ E G
Sbjct: 139 LISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKG 198
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYG--ARSDLE- 218
+TYN ++ ++K G E+V V E+ D +Y I+ YG R DL
Sbjct: 199 FQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLAL 258
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
G+ +R + P D TY K + I +A VL++ + + + ++ L
Sbjct: 259 GLYDEMRAIGCTP----DAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSAL 314
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
I YA G + + R +D + + Y+ ML+ + E + + + G
Sbjct: 315 ICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGY 374
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
D + ++ E +++D+ +A + V+++ A +G
Sbjct: 375 KPDDGLYQVLLAALAKGNEHDEIEGVIQDM----EAVFEMNPLVISSILIKAECISQGAS 430
Query: 399 CMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMY-HAF 457
+K A +G++PD K + SIL G + + + +R +P + +
Sbjct: 431 LLKRACL-----QGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECS 485
Query: 458 IKANIRNGKGVDELLD-----SMKADGIDEDEETKEILVCTMEK 496
I +NGK VD + + +K +D + E L+ +E+
Sbjct: 486 IMLLCKNGKIVDAIQEYSRKQMLKRGSFGQDCDLYEYLITYLEE 529
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 10/221 (4%)
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
++ +A G+ EV+++++ K A Y M+ L + E ++ E E +
Sbjct: 697 LMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGA 756
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G D + N +++ Y G + ++E G +++ + Y + E G
Sbjct: 757 GFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEG 816
Query: 397 FQCMKAALSVYVEGK-GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMY 454
F + Y GK G P + +L+ G + + +RT +NR +Y
Sbjct: 817 FTLL------YEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIY 870
Query: 455 HAFIKA--NIRNGKGVDELLDSMKADGIDEDEETKEILVCT 493
H +K N RN + LL +MK DGI+ T IL+ +
Sbjct: 871 HMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTS 911
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 1/183 (0%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL Y D+ + + + E G+ TYN ++ +YS+ + E+ +L EM +
Sbjct: 768 LLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRG 827
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ P SY+I + + G E +++ EM ++ + L+ S Y Y A KA
Sbjct: 828 LTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGY-RLNRSIYHMMMKIYRNARNHSKA 886
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
+L +E + + L++ Y + G+ E ++ + K++ Y T+L+A
Sbjct: 887 EHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDA 946
Query: 317 LMK 319
++
Sbjct: 947 YLR 949
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 115/284 (40%), Gaps = 9/284 (3%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T ++ ++ + + D+ ++++++ I +S T ++ ++K G +V +
Sbjct: 656 TVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIY 715
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHF 246
MKA P+ YRI I+ +E+++ EME +P +V+ +
Sbjct: 716 NGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVV----LNTLLLM 771
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWDLEKTACKRY 305
Y D+ +V E + D YN LI +Y+ E L+++ K
Sbjct: 772 YTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPK 831
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+ Y +L A K E+A+ + +E G + I + ++ Y N AE +L
Sbjct: 832 LE-SYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLL 890
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
+ E G T + ++ Y +G + + + + S +E
Sbjct: 891 SAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLE 934
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+ M+EA KL ++AE +K + + D RI NA+I Y +GL ++A AI + +++
Sbjct: 592 VAMIEAYGKLKLWQQAENFVKGLK-QESGVDRRIWNALIHAYAESGLYEHARAIFDIMIK 650
Query: 371 KGKATTPNS 379
KG T S
Sbjct: 651 KGPLPTVES 659
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 182/476 (38%), Gaps = 61/476 (12%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
I+R L R + AL V D M +G P H + L+ R GF SA L
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVI-LEAACRGGGFRSAVRALQVLHAK 172
Query: 128 EKTYQTYGA--LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MCL------- 175
T + +++ Q D+ + RK+ G ++YN + +C+
Sbjct: 173 GCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDV 232
Query: 176 -----------------------------------YSKTGQYEKVPDVLTEMKAKNIFPD 200
K G +E D+L+ M + + P+
Sbjct: 233 EELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPN 292
Query: 201 NFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVL 260
Y + + E E +L EM Q LD T+ F+ + L+D+ ++L
Sbjct: 293 VVCYNTVLKGLCSAERWEEAEDLLAEM-FQEDCPLDDVTFNILVDFFCQNGLVDRVIELL 351
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSE-VLRLWDLEKTACKRYINRDYITMLEALMK 319
++ E D I Y +I+ + G E V+ L ++ CK Y +L+ L +
Sbjct: 352 EQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPN-TISYTIVLKGLCR 410
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
+A++++ G + N +I C GL + A +L+ ++ G + S
Sbjct: 411 AERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLIS 470
Query: 380 WAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEA 438
++ V G AGKTE + + ++ KG P+ + +S+ S L EG ++
Sbjct: 471 YSTVIDGLGKAGKTEEALELLNVMIN-----KGITPNTIIYSSMASALSREGRTDKIIQM 525
Query: 439 FVAALRTVIPMNRQMYHAFIKANIR---NGKGVDELLDSMKADGIDEDEETKEILV 491
F + + + +Y+A I + + + +D M ++G +E T IL+
Sbjct: 526 FDSIQDATVRSDAALYNAVISSLCKRWETDRAID-FFAYMVSNGCMPNESTYTILI 580
>gi|224104097|ref|XP_002313317.1| predicted protein [Populus trichocarpa]
gi|222849725|gb|EEE87272.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 118/265 (44%), Gaps = 6/265 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+NC ++ + + +M +GI ST+TYN I+ Y K +E++ + LT+M
Sbjct: 188 TYSILINCCIKLHRFELIRGILAEMSYLGIECSTVTYNTIIDGYGKAKMFEEMENTLTDM 247
Query: 193 -KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
++ + PD F++ I +YG++ ++ ME E + + D T+ Y KA
Sbjct: 248 IESGSSVPDLFTFNSIIGAYGSKGRIDKMEKWYTEFQLM-GLRQDIKTFNILIRSYGKAG 306
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+ K VL+ E+R + +N I + G+ + + K + Y
Sbjct: 307 MYGKMRSVLEFMEKRFFSPSIVTHNIFIETFGKAGDIETMEEYFSKMKHLGIKPNTVTYC 366
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+++ A K G + + +L++ E S DT N VI Y G ++ + L +
Sbjct: 367 SLVSAYSKAGHIMKVDSILRQVENSDVILDTPFFNCVISAYGRAGDIEKMSELF--LGME 424
Query: 372 GKATTPNS--WAVVAAGYFDAGKTE 394
G+ P+S +A + Y G E
Sbjct: 425 GRKCKPDSITFATMIQAYNAQGMIE 449
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +++ Y + + DK + + + MG+ T+N ++ Y K G Y K+ VL M
Sbjct: 259 TFNSIIGAYGSKGRIDKMEKWYTEFQLMGLRQDIKTFNILIRSYGKAGMYGKMRSVLEFM 318
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ + P ++ I I ++G D+E ME +M+ +P+ V TY S Y K
Sbjct: 319 EKRFFSPSIVTHNIFIETFGKAGDIETMEEYFSKMKHLGIKPNTV----TYCSLVSAYSK 374
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINR 308
A I K +L++ E D +N +IS Y G+ ++ L+ +E CK +
Sbjct: 375 AGHIMKVDSILRQVENSDVILDTPFFNCVISAYGRAGDIEKMSELFLGMEGRKCKP-DSI 433
Query: 309 DYITMLEALMKLGEHEEAE 327
+ TM++A G E A+
Sbjct: 434 TFATMIQAYNAQGMIEAAQ 452
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 155/426 (36%), Gaps = 59/426 (13%)
Query: 64 ELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAV---QLDLIGRVHGFLSAESY 120
EL RI+R K Q + N V D A+ Q + ++ L + +
Sbjct: 51 ELSRILRTEAAIKAIEQKANSKKYNNLWPKAVLEALDDAIKENQWESALKIFELLRKQHW 110
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+ E +TY LL + RQ ++ F M G+ + Y ++ Y K+G
Sbjct: 111 Y------EPRTKTYTKLLMMLGKCRQPEEGSFLFEVMLSDGLKPTIDVYTALVSAYGKSG 164
Query: 181 QYEKVPDVLTEMKA-KNIFPDNFSYRICIN------------------------------ 209
Q +K ++ EMKA PD ++Y I IN
Sbjct: 165 QLDKAFSIVVEMKAISECKPDVYTYSILINCCIKLHRFELIRGILAEMSYLGIECSTVTY 224
Query: 210 -----SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE 264
YG E ME L +M V D T+ S Y IDK + +
Sbjct: 225 NTIIDGYGKAKMFEEMENTLTDMIESGSSVPDLFTFNSIIGAYGSKGRIDKMEKWYTEFQ 284
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLG 321
++D +N LI Y G ++ + + + KR+ + +T +E K G
Sbjct: 285 LMGLRQDIKTFNILIRSYGKAGMYGKMRSVLEFME---KRFFSPSIVTHNIFIETFGKAG 341
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+ E E+ + + G +T +++ Y G + ++IL + +
Sbjct: 342 DIETMEEYFSKMKHLGIKPNTVTYCSLVSAYSKAGHIMKVDSILRQVENSDVILDTPFFN 401
Query: 382 VVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV---QDVEA 438
V + Y AG E+ + L + +EG+ KPD +++ +G + Q +E
Sbjct: 402 CVISAYGRAGDIEK-----MSELFLGMEGRKCKPDSITFATMIQAYNAQGMIEAAQGMEN 456
Query: 439 FVAALR 444
+ A R
Sbjct: 457 MMIATR 462
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 130/316 (41%), Gaps = 26/316 (8%)
Query: 53 WVKNGNK---VRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGI--------CVFAPCDH 101
W K NK V + +I L + K +A +V M KGI + C
Sbjct: 455 WFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCK 514
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
+++ ++HG ++ + K D T+ T LL+ Y + ++ +MK G
Sbjct: 515 DSKMEEAIKLHGDMTRRGF----KPDLFTFNT---LLHAYCNLGKMEETFHLLDQMKTEG 567
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
+ ++Y I+ + K K + LTE+ + + P+ F Y I YG D+ G
Sbjct: 568 LQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAI 627
Query: 222 IILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+ M+S QP V TY S ++ A L+++A + +A E IGY +
Sbjct: 628 DAVETMKSNGIQPTNV----TYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIM 683
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
I Y LG E + ++ ++ Y T++ A K G EEA K+ E SG
Sbjct: 684 IQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGV 743
Query: 339 SYDTRIPNAVIIGYCN 354
D I +I C+
Sbjct: 744 IPDN-ITYGTLIARCS 758
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/360 (18%), Positives = 145/360 (40%), Gaps = 14/360 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+G L+N R + + ++M+++G++ + + YN+++ + + G + + EM
Sbjct: 293 TFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEM 352
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P +Y + + ++E E IL +M S V A +
Sbjct: 353 VLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRR 412
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW--DLEKTACKRYINRDY 310
++ + + R + + + G E + +W L K +
Sbjct: 413 LESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSN- 471
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++ L + +EA KV++ G D+ N +I G C + ++ A + D+
Sbjct: 472 -ALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTR 530
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+G ++ + Y + GK E F + ++ +G +PD +I+
Sbjct: 531 RGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQ-----MKTEGLQPDIVSYGTIIDGHCKA 585
Query: 431 GSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEET 486
++ + ++ L R + P N +Y+A I RNG G + +++MK++GI T
Sbjct: 586 KDIRKAKEYLTELMDRGLKP-NVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVT 644
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/375 (18%), Positives = 154/375 (41%), Gaps = 16/375 (4%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC-LYSKTGQY 182
LK + T TY + ++ + ++A M +G+ + +N ++ L +T +
Sbjct: 354 LKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRL 413
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSY--GARSDLEGMEIILREMESQPHIVLDWSTY 240
E V + EM + + P++ C+ G + E + I + + + ++ +T
Sbjct: 414 ESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQ-EAVGIWFKTLNKG--LGVNLATS 470
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEK 299
+ H + + +A+ V++ + + D I YN +I E ++L D+ +
Sbjct: 471 NALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTR 530
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
K + + T+L A LG+ EE +L + + G D +I G+C ++
Sbjct: 531 RGFKPDL-FTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIR 589
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
A+ L +L+++G + + GY G ++ ++ G +P
Sbjct: 590 KAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVET-----MKSNGIQPTNVT 644
Query: 420 ITSILSKLGDEGSVQDVEA-FVAALRTVIPMNRQMYHAFIKANIRNGKGVDEL--LDSMK 476
S++ + G V++ + F A + + Y I+ + GK V+ + + M+
Sbjct: 645 YGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMR 704
Query: 477 ADGIDEDEETKEILV 491
+ GI ++ T L+
Sbjct: 705 SRGISPNKLTYTTLM 719
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 146/354 (41%), Gaps = 23/354 (6%)
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK-AKNIFPDNFSYRIC 207
+A FR + G S T N + + GQ + +V EM+ ++N+ + +SY
Sbjct: 168 RAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAM 227
Query: 208 INSYGARSDLE-GMEII--LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE 264
I + ++ G E++ L QP +V TY K+ +++A + + E
Sbjct: 228 IKALCKAGKVDAGFEMLAELWRAGLQPTVV----TYNVLMDALCKSGRVEEAFRLKGRME 283
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEV-LRLWDLEKTACKRYINRDYITMLEALMKLGEH 323
+ + + LI+ A EV + L ++E+ Y ++ + G
Sbjct: 284 QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPN-EVIYNELIGWHCRKGHC 342
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
+A ++ E L N + C G ++ AE ILED++ G + V
Sbjct: 343 SQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTV 402
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQD-VEAFV 440
A +T R +++ +S+ E +G +P+ ++T+ + +L G Q+ V +
Sbjct: 403 VAWLLQ--RTRR----LESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWF 456
Query: 441 AALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETKEILV 491
L + +N +A I + GK + E ++ +M GI+ D T I++
Sbjct: 457 KTLNKGLGVNLATSNALIHG-LCEGKYMKEATKVIQTMLNKGIELDSITYNIMI 509
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 153/381 (40%), Gaps = 22/381 (5%)
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+V GF+ + + D TY T L+ Y + R + A +M+E G +L+ +TY
Sbjct: 229 KVRGFMEG----AGISPDVYTYST---LIEAYCKVRDLESAKKVVEEMRETGCSLNVVTY 281
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
N ++ + G E+ EM+ + PD F+Y IN R + + +L EM
Sbjct: 282 NTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSC 341
Query: 230 ---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
P++V+ Y++ +++ D+A ++K+ Q + I Y+ LI LG
Sbjct: 342 AGLMPNVVV----YSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLG 397
Query: 287 NKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
R+ Y ++E ++ EEA +L E G S + +
Sbjct: 398 RMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYS 457
Query: 347 AVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSV 406
+I G C G + A +LE ++ G +A + +GY G + +K
Sbjct: 458 IIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKK---- 513
Query: 407 YVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNG 465
+ + PD S++ L + G + + +E + L N Y I G
Sbjct: 514 -MTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAG 572
Query: 466 --KGVDELLDSMKADGIDEDE 484
+ ++LL M G++ ++
Sbjct: 573 NLEKAEQLLHQMLNSGLNPND 593
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 167/403 (41%), Gaps = 22/403 (5%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDL-- 107
L+ + +G K +I + FS A E M R+ + C +++ + L
Sbjct: 476 LEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSN 535
Query: 108 IGRVHGFLSAESYFSNLKDDEKTYQ----TYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
+G++ A Y+ + EK +Q TYG L++ Y +KA +M G+
Sbjct: 536 VGKMD---EAIEYYDEML--EKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLN 590
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII 223
+ Y I+ Y K+ EKV L M K + PDN Y I I++ + ++ +
Sbjct: 591 PNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSV 650
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
L +E +V D Y S + KA ++KA +L + ++ + YN LI +
Sbjct: 651 LSVIEKN-GLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFC 709
Query: 284 SLGNKSEVLRLWDLEKTACKRYINR--DYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+ S +++ CK Y T+++ K G+ +A + E G + D
Sbjct: 710 KSDDISHARNIFN--SIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPD 767
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+ + + G N+G +Q A I E+++ +G A +S+ + G+ GK + + +
Sbjct: 768 AFVYSVLAAGCSNSGDLQQALFITEEMIARGYAII-SSFNTLVHGFCKRGKLQETVKFLH 826
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
+ K P + +I+ LG+ G + + L+
Sbjct: 827 VMMD-----KDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQ 864
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 144/376 (38%), Gaps = 60/376 (15%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG-IALSTLTYNDIMCLYSKTGQYEKVP 186
+ T TYG +++ + T AL RKM+E+ I + + Y+ I+ K G++
Sbjct: 216 QPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
++ TEM+ K IFPD F+Y I + + WS
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGR--------------------WS-------- 307
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKR 304
A +L++ ER D + YN LI+ + G E L+D L +
Sbjct: 308 --------DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
I Y +M++ K + AE + G S + N +I GYC + + +
Sbjct: 360 TIT--YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
L ++ E G ++ + G++ G ++ +S G PD ++L
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS-----SGLCPDIVTCDTLL 472
Query: 425 SKLGDEGSVQD-VEAFVAA------LRTVIPMNR-----QMYHAFIKANIRNGKGV--DE 470
L D G ++D +E F L P N Q Y+ I I GK + +E
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532
Query: 471 LLDSMKADGIDEDEET 486
L + M GI D T
Sbjct: 533 LYEEMPHRGIVPDTIT 548
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 130/279 (46%), Gaps = 16/279 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+N +V++ + +A + +M GI +T+TY+ ++ + K + + + M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 193 KAKNIFPDNFSYRICINSY-GARSDLEGMEIILREMESQPHIVLDWSTYASAAH-FYIKA 250
K P+ ++ I+ Y GA+ +GME +L EM ++ +V D +TY + H FY+
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGME-LLHEM-TETGLVADTTTYNTLIHGFYLVG 444
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW--------DLEKTAC 302
+L + A D+L++ D + + L+ G + L ++ DL+ +
Sbjct: 445 DL-NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 303 KRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
+ D Y ++ L+ G+ EAE++ +E G DT +++I G C +
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
A + + + K + ++ + GY AG+ + G +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 56 NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFL 115
NG + V +I L +F +A E+ + M +GI V ++ +D + +
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI-VPDTITYSSMIDGLCKQSRLD 563
Query: 116 SAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A F ++ K T+ L+N Y + + D L F +M GI + +TY ++
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
C + K G D+ EM + ++PD + R
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 112/263 (42%), Gaps = 41/263 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
++ L+ C+ + ALS F K+ ++G+ +T+N ++ V D ++E
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLL-------HGLCVEDRVSE- 167
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
A N+F F E +P++V T+ + + +
Sbjct: 168 -ALNLFHQMF-----------------------ETTCRPNVV----TFTTLMNGLCREGR 199
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
I +A +L + E Q I Y ++ +G+ L L L K +I +
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDL--LRKMEEISHIIPNVVI 257
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++++L K G H +A+ + E + G D N++I+G+C++G +AE +L++++
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 370 EKGKATTPNSWAVVAAGYFDAGK 392
E+ + ++ + + GK
Sbjct: 318 ERKISPDVVTYNALINAFVKEGK 340
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 141/338 (41%), Gaps = 42/338 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
++ ++L C ++R+ D+ALS F MK+ S+ TYN I+ + G+ E+ +L EM
Sbjct: 222 SFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS-TYNIIIDMLCLGGRVEEAYRILDEM 280
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ ++FP+ + I ++ LE I E SQ D TY S K
Sbjct: 281 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIF-ESASQRGCNPDCVTYCSLIDGLGKKGQ 339
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACK-------R 304
+D+A + +K + + + Y LI + G K + +++ +L + CK
Sbjct: 340 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNT 399
Query: 305 YIN---------------------------RDYITMLEALMKLGEHEEAEKVLKEWELSG 337
Y++ R Y ++ L K G+ E + + G
Sbjct: 400 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 459
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+ D R NAV+ G+C +G V A ILE++ EK T ++ + G + + +
Sbjct: 460 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAY 519
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
+ A S KG + + + +S++ G G + +
Sbjct: 520 MLFEEAKS-----KGIELNVVLYSSLIDGFGKVGRIDE 552
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 132/311 (42%), Gaps = 17/311 (5%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ Y L+ R+ ++AL R+M+E+G + + ++ ++ GQ ++
Sbjct: 44 AFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALV 103
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
E+K + PD Y +CI+ +G +++ E+++Q + D +Y S K
Sbjct: 104 DEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQ-GLKPDDVSYTSMIWVLCK 162
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINR 308
A + +A ++ + E YN +I Y S G + +L + L + C +
Sbjct: 163 AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSV-- 220
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYD--TRIPNAVIIGYCNNGLVQNAEAILE 366
++ L LG+ + ++ L +E+ + + N +I C G V+ A IL+
Sbjct: 221 --VSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILD 278
Query: 367 DLVEKGKATTPNSWAV--VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
++ + + PN V + A K E ++ ++A +G PD S++
Sbjct: 279 EM--EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA-----SQRGCNPDCVTYCSLI 331
Query: 425 SKLGDEGSVQD 435
LG +G V +
Sbjct: 332 DGLGKKGQVDE 342
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 9/251 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L++ ++ Q D+A F KM + G + + Y ++ + G+ E V E+
Sbjct: 326 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKEL 385
Query: 193 KAKNIFPDNF---SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ PD +Y C+ G ++E +I ++ S + D +Y+ H K
Sbjct: 386 IRRGCKPDLTLLNTYMDCVFKAG---EVEKGRMIFEDIRSYGFLP-DVRSYSILIHGLTK 441
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A + S++ +++ D YN ++ + G + + + K C +
Sbjct: 442 AGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT 501
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ L K+ +EA + +E + G + + +++I G+ G + A ILE+++
Sbjct: 502 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 561
Query: 370 EKGKATTPNSW 380
+KG TPN +
Sbjct: 562 KKG--LTPNVY 570
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 105/259 (40%), Gaps = 38/259 (14%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
++Y L++ + Q + + F MK+ G AL YN ++ + K+G+ K ++L E
Sbjct: 430 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 489
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
MK K + P +Y ++ L+ ++ E +S+ I L+ Y+S + K
Sbjct: 490 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSK-GIELNVVLYSSLIDGFGKVG 548
Query: 252 LIDKAS----------------------DVLKKAEERLEQ-------------KDGIGYN 276
ID+A D L KAEE E + Y+
Sbjct: 549 RIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYS 608
Query: 277 FLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
LI+ + ++ W D++K + Y TM+ L K+G +A + + ++
Sbjct: 609 ILINGLCRVQKYNKAFVFWQDMQKQGLVPNV-VTYTTMISGLAKVGNITDAYSLFERFKA 667
Query: 336 SGNSYDTRIPNAVIIGYCN 354
+G D NA+I G N
Sbjct: 668 NGGIPDAASFNALIEGMSN 686
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
+K TY TY L+N R ++ +KA ++ M++ G+ + +TY ++ +K G
Sbjct: 598 MKCPPNTY-TYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNIT 656
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+ KA PD S+ I EGM R ME+ V S+ + +
Sbjct: 657 DAYSLFERFKANGGIPDAASFNALI---------EGMSNANRAMEAYQTTVYQLSSSSCS 707
Query: 244 AHFYI 248
+F +
Sbjct: 708 WNFLV 712
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 150/337 (44%), Gaps = 23/337 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +L+N + R + AL M E G TYN ++ K G++EK ++L +M
Sbjct: 265 TFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQM 324
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P+ +Y I++ +++E + R + S+ ++ D T+ + I+
Sbjct: 325 ILRECSPNTVTYNTLISALCKENEIEAATDLARILVSK-GLLPDVCTFNT----LIQGLC 379
Query: 253 IDKASDVLKKAEERLEQK----DGIGYNFLI-SLYASLGNKSEVLRLWDLEKTACKRYIN 307
+ K D+ + E ++ K D Y+ LI SL K ++ L ++E + C R
Sbjct: 380 LSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNA- 438
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+++ L K E+AE++ + EL G S + N +I G C N V+ A +++
Sbjct: 439 VVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQ 498
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
++ +G ++ + + G E+ ++ S G +PD +++ L
Sbjct: 499 MIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMAS-----NGCEPDIFTYGTLIGGL 553
Query: 428 GDEGSVQDVEAFVAALRTV----IPMNRQMYHAFIKA 460
G V DV + LR+V I + Y+ I+A
Sbjct: 554 CRAGRV-DVAS--KLLRSVQMKGIVLTPHAYNPVIQA 587
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 137/313 (43%), Gaps = 15/313 (4%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
L+N + ++ + ++AL ++ E G + +T+N ++ + + G D++ M K
Sbjct: 233 VLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEK 292
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIKANL 252
PD ++Y I+ + E IL++M E P+ V TY + K N
Sbjct: 293 GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTV----TYNTLISALCKENE 348
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
I+ A+D+ + + D +N LI N+ + +++ K + Y
Sbjct: 349 IEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSI 408
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++++L +EA +LKE E SG + + + N +I G C + +++AE I + + G
Sbjct: 409 LIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLG 468
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS---KLGD 429
+ + ++ + G + E Q M + +G KPD S+L+ ++GD
Sbjct: 469 VSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIM-----EGLKPDKFTYNSLLTYFCRVGD 523
Query: 430 EGSVQDVEAFVAA 442
D+ +A+
Sbjct: 524 IEKAGDIVQTMAS 536
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 112/272 (41%), Gaps = 1/272 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ ++ + + A R + G+ T+N ++ + + ++ EM
Sbjct: 335 TYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEM 394
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K K PD F+Y I I+S L+ ++L+EMES + Y + K+
Sbjct: 395 KNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESS-GCARNAVVYNTLIDGLCKSRR 453
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
I+ A ++ + E + + YN LI E +L D + Y +
Sbjct: 454 IEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNS 513
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+L ++G+ E+A +++ +G D +I G C G V A +L + KG
Sbjct: 514 LLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKG 573
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
TP+++ V F +T+ G + + +
Sbjct: 574 IVLTPHAYNPVIQALFMRKRTKEGMRLFREMM 605
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 146/364 (40%), Gaps = 15/364 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y LN V + KM GI L T+N ++ K Q +L EM
Sbjct: 126 YNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMA 185
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ PD ++ + + DL G + ++M ++ + S F + +
Sbjct: 186 NHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVE 245
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---Y 310
+ VL+ +EE D + +N L++ + +GN ++ L + D ++ + D Y
Sbjct: 246 EALRFVLEVSEEGF-SPDQVTFNSLVNGFCRIGNVNDALDIVDF---MIEKGFDPDVYTY 301
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+++ + KLGE E+A ++L++ L S +T N +I C ++ A + LV
Sbjct: 302 NSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVS 361
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
KG ++ + G + + + + ++ KG KPD + ++ L E
Sbjct: 362 KGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEE-----MKNKGCKPDEFTYSILIDSLCYE 416
Query: 431 GSVQDVEAFVAALRTV-IPMNRQMYHAFIKA--NIRNGKGVDELLDSMKADGIDEDEETK 487
+++ + + + N +Y+ I R + +E+ D M+ G+ T
Sbjct: 417 RRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTY 476
Query: 488 EILV 491
L+
Sbjct: 477 NTLI 480
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 106/257 (41%), Gaps = 43/257 (16%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L++ + R+ + A F +M+ +G++ S++TYN ++ K + E+ ++ +M
Sbjct: 441 YNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMI 500
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKA 250
+ + PD F+Y + + D+E I++ M S +P D TY + +A
Sbjct: 501 MEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEP----DIFTYGTLIGGLCRA 556
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+D AS +L+ Q GI +++ +A Y
Sbjct: 557 GRVDVASKLLRSV-----QMKGI----VLTPHA--------------------------Y 581
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN-NGLVQNAEAILEDLV 369
+++AL +E ++ +E + D V G CN G +Q A +++
Sbjct: 582 NPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEML 641
Query: 370 EKGKATTPNSWAVVAAG 386
EKG S+ +A G
Sbjct: 642 EKGILPEFPSFGFLAEG 658
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 72/175 (41%), Gaps = 4/175 (2%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK-- 125
+I L +R +AL + M G C + +D + + AE F ++
Sbjct: 409 LIDSLCYERRLKEALMLLKEMESSG-CARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELL 467
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
++ TY L++ + ++ ++A +M G+ TYN ++ + + G EK
Sbjct: 468 GVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKA 527
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
D++ M + PD F+Y I ++ +LR ++ + IVL Y
Sbjct: 528 GDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMK-GIVLTPHAY 581
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 160/380 (42%), Gaps = 31/380 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LL+ + + + D+AL F + G +TYN ++ + K + ++ +L M
Sbjct: 47 TYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM 106
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++N+ PD +Y +N ++ +++ + P+ V+ +ST S ++
Sbjct: 107 VSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPN-VITYSTLISGLCRELRG-- 163
Query: 253 IDKASDVLKKAEERLEQ---KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
S+ LK L+Q + YN LI L + V ++L K + D
Sbjct: 164 ---VSEALKLFGSVLKQGYEPEVPTYNILID---GLLKEDRVNEAFELFSGLVKHGLEPD 217
Query: 310 YIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
IT ++ L K G E+A +LK+ + G D NAVI G C V AE +L
Sbjct: 218 AITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLS 277
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP---KVITSI 423
+ KG + S+ + G AGK ++ K L +G KP ++
Sbjct: 278 GMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK-----RGVKPTVVTYNILVDG 332
Query: 424 LSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADG 479
L K EG +++ A+ + +P + Y A I + GK D LL +M+A G
Sbjct: 333 LCKARQEGRIKEAITLFDAMIEKGRVP-DVVTYSALIDGLGKAGKLDDARRLLGAMEAKG 391
Query: 480 IDEDEETKEILV---CTMEK 496
+ T L+ C +EK
Sbjct: 392 CIPNVYTYNSLISGLCGLEK 411
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 108/253 (42%), Gaps = 14/253 (5%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E TY L++ +++ + ++A F + + G+ +TY + K G+ E
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAA 244
+L +M K PD S+ IN ++ E++L ME++ P+ + ++ +
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAI----SFNTLI 295
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL---GNKSEVLRLWD--LEK 299
+A KA K+ +R + + YN L+ G E + L+D +EK
Sbjct: 296 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK 355
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
+ Y +++ L K G+ ++A ++L E G + N++I G C V
Sbjct: 356 GRVPDVVT--YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVD 413
Query: 360 NAEAILEDLVEKG 372
A + +VEKG
Sbjct: 414 EALELFVAMVEKG 426
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 131/279 (46%), Gaps = 16/279 (5%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY L+ + ++ KA + KM G+ +TYN I Y++ G+ + ++ E
Sbjct: 214 RTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILE 273
Query: 192 MKAKNIFPDNFSYRICINSYGARSDL-EGMEIILR--EMESQPHIVLDWSTYASAAHFYI 248
M+ N+ P+ + I I Y + E ++ + R ++ QP++V+ + S +I
Sbjct: 274 MQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVV----FNSLIKGFI 329
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
A D ++VL EE + D I ++ +++ +++ G + ++D K I
Sbjct: 330 DAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFD---DMVKARIQP 386
Query: 309 D---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
D Y + + ++ GE E+AE++L SG + I +I G+C+ G ++ A I
Sbjct: 387 DAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIF 446
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAG---KTERGFQCMK 401
E + E G A ++ + GY +A K+E Q M+
Sbjct: 447 EKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIME 485
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/366 (19%), Positives = 155/366 (42%), Gaps = 30/366 (8%)
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
+T ++ L+N + + + + S + E G S +TY ++ + ++ + +
Sbjct: 70 RTVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSI 129
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEII--LREMESQPHIVLDWSTYASAAH 245
+++++ + PD+ + IN++ ++ E M+ ++E S+P ST+ +
Sbjct: 130 ISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTT----STFNTLIK 185
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGI-----GYNFLISLYASLGNKSEVLRLWDLEKT 300
Y A +++ +L E + Q + + YN L+ + NK +++ W++
Sbjct: 186 GYGIAGEPEESQKLL----ELMSQDENVRPNLRTYNVLVRAWC---NKKNIMKAWNVVYK 238
Query: 301 ACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
+ D Y T+ A + GE +AE ++ E + S + R +I GYC G
Sbjct: 239 MVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGK 298
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP 417
++ A + + + G + + G+ DA + + + +E G KPD
Sbjct: 299 IKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVL-----TLMEEFGVKPDV 353
Query: 418 KVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKG--VDELLDS 474
++I++ G + E F ++ I + +Y K +R G+ +E+L++
Sbjct: 354 ITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNA 413
Query: 475 MKADGI 480
M G
Sbjct: 414 MIKSGF 419
>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g38730-like [Brachypodium distachyon]
Length = 599
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 9/269 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y R +A+ +M+ G+ TYN I+ + G+ ++V +L+EM
Sbjct: 288 TYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEM 347
Query: 193 KAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
+ + D+ + INSY R D+ ++ R MES + LD TY + H + KA
Sbjct: 348 DGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESG--LQLDQFTYKALIHGFCKAK 405
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-- 309
+D+A + L + R + +++L+ + N VL + D KR + D
Sbjct: 406 ELDEAKEALFEMMGRGFSPNYSVFSWLVDGFCKKNNTDAVLLIPD---ELIKRGLPPDKS 462
Query: 310 -YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y +++ L K G + A+KVL + + G D + + + G V A IL ++
Sbjct: 463 VYRSLIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVYATLAYAHLTAGKVAAASDILNEM 522
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGF 397
K + TP + + Y D T F
Sbjct: 523 ARKQMSVTPQIYNCLCTSYGDEKATLNMF 551
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 137/338 (40%), Gaps = 49/338 (14%)
Query: 77 RFSQALEVSDWMNRKGICVFAPCDHAVQ--LDLIGRVHGFLSAESYFSNLKDDEKTYQT- 133
R A V D M +G+ AP HA L + R +A F+ + T
Sbjct: 126 RPHDAARVFDQMRARGL---APDAHACTALLTALARARMTATAHKVFNEMGRAGVAMNTH 182
Query: 134 -YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG-QYEKV------ 185
Y A+L+ ++ R +A +M G+ L ++N ++ LY + G QYE +
Sbjct: 183 VYNAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVRKGMQYEAMCVRERM 242
Query: 186 ------PDVLT----------------------EMKAKNIFPDNFSYRICINSYGARSDL 217
PD++T +M A + PD +Y ++ Y D+
Sbjct: 243 QDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDV 302
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
G + LRE +V +TY + + + + + +L + + R Q D + N
Sbjct: 303 -GEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNT 361
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
LI+ YA G+ + ++ + + Y ++ K E +EA++ L E G
Sbjct: 362 LINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFEMMGRG 421
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAIL---EDLVEKG 372
S + + + ++ G+C N +A+L ++L+++G
Sbjct: 422 FSPNYSVFSWLVDGFCKK---NNTDAVLLIPDELIKRG 456
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 131/279 (46%), Gaps = 16/279 (5%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY L+ + ++ KA + KM G+ +TYN I Y++ G+ + ++ E
Sbjct: 214 RTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILE 273
Query: 192 MKAKNIFPDNFSYRICINSYGARSDL-EGMEIILR--EMESQPHIVLDWSTYASAAHFYI 248
M+ N+ P+ + I I Y + E ++ + R ++ QP++V+ + S +I
Sbjct: 274 MQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVV----FNSLIKGFI 329
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
A D ++VL EE + D I ++ +++ +++ G + ++D K I
Sbjct: 330 DAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFD---DMVKARIQP 386
Query: 309 D---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
D Y + + ++ GE E+AE++L SG + I +I G+C+ G ++ A I
Sbjct: 387 DAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIF 446
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAG---KTERGFQCMK 401
E + E G A ++ + GY +A K+E Q M+
Sbjct: 447 EKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIME 485
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/366 (19%), Positives = 155/366 (42%), Gaps = 30/366 (8%)
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
+T ++ L+N + + + + S + E G S +TY ++ + ++ + +
Sbjct: 70 RTVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSI 129
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEII--LREMESQPHIVLDWSTYASAAH 245
+++++ + PD+ + IN++ ++ E M+ ++E S+P ST+ +
Sbjct: 130 ISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTT----STFNTLIK 185
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGI-----GYNFLISLYASLGNKSEVLRLWDLEKT 300
Y A +++ +L E + Q + + YN L+ + NK +++ W++
Sbjct: 186 GYGIAGEPEESQKLL----ELMSQDENVRPNLRTYNVLVRAWC---NKKNIMKAWNVVYK 238
Query: 301 ACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
+ D Y T+ A + GE +AE ++ E + S + R +I GYC G
Sbjct: 239 MVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGK 298
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP 417
++ A + + + G + + G+ DA + + + +E G KPD
Sbjct: 299 IKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVL-----TLMEEFGVKPDV 353
Query: 418 KVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKG--VDELLDS 474
++I++ G + E F ++ I + +Y K +R G+ +E+L++
Sbjct: 354 ITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNA 413
Query: 475 MKADGI 480
M G
Sbjct: 414 MIKSGF 419
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 147/346 (42%), Gaps = 18/346 (5%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ Y L+ +++D L+ F +M+E+G +S + ++ ++++ G+ + +L
Sbjct: 197 AFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLL 256
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EMK+ + D Y +CI+ +G ++ E++S ++ D TY S K
Sbjct: 257 DEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHG-LLPDDVTYTSMIGVLCK 315
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT-ACKRYINR 308
N +D+A ++ ++ E+ YN +I Y S G E L + +K C +
Sbjct: 316 GNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIA 375
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y +L L K G EA + +E + + + N +I C G V+ A + + +
Sbjct: 376 -YNCILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAM 433
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK---PDPKVITSILS 425
E G + ++ A K + A S++ EG K PD S++
Sbjct: 434 KEAGLFPNVMTVNIMIDRLCKAKKLDE-------ACSIF-EGMNHKICSPDEVTFCSLID 485
Query: 426 KLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVD 469
LG +G V D + IP N +Y + IK+ + G+ D
Sbjct: 486 GLGKQGRVDDAYRLYEQMLDSDKIP-NAVVYTSLIKSFFKCGRKED 530
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 151/393 (38%), Gaps = 51/393 (12%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E + + ++ + R+ + D ALS +MK + + YN + + K G+ +
Sbjct: 230 EVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWK 289
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
E+K+ + PD+ +Y I + L+ I +ME ++ ++ Y + Y
Sbjct: 290 FFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYA-YNTMIMGY 348
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYI 306
A D+A +L++ + R I YN +++ G E LR + +++K A
Sbjct: 349 GSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNL- 407
Query: 307 NRDYITMLEALMKLGEHEEAEKV---LKEWELSGNSYDTRI------------------- 344
Y +++ L K GE E A KV +KE L N I
Sbjct: 408 -STYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFE 466
Query: 345 --------PNAV-----IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
P+ V I G G V +A + E +++ K + + +F G
Sbjct: 467 GMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCG 526
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIP- 448
+ E G + K + +G PD +++ + + + G A + R IP
Sbjct: 527 RKEDGHKIFKEMIH-----RGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPD 581
Query: 449 -MNRQ-MYHAFIKANIRNGKGVDELLDSMKADG 479
M+ + H +KA + EL +MK G
Sbjct: 582 VMSYSILIHGLVKAGF--ARETYELFYAMKEQG 612
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 158/411 (38%), Gaps = 57/411 (13%)
Query: 68 IIRDLRKRKRFSQALEVSDWM--NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK 125
+I L K R +A+E+ + M NR PC +A ++G E+Y +L
Sbjct: 309 MIGVLCKGNRLDEAVEIFEQMEQNRN-----VPCAYAYNTMIMGYGSAGKFDEAY--SLL 361
Query: 126 DDEK------TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
+ +K + Y +L C ++ + +AL F +MK+ A + TYN ++ + K
Sbjct: 362 ERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKA 420
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
G+ E V MK +FP+ + I I+ L+ I M + D T
Sbjct: 421 GEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKI-CSPDEVT 479
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK----------- 288
+ S K +D A + ++ + + + + Y LI + G K
Sbjct: 480 FCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMI 539
Query: 289 ----SEVLRLWD------------------LEKTACKRYIN--RDYITMLEALMKLGEHE 324
S LRL + E+ + +I Y ++ L+K G
Sbjct: 540 HRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFAR 599
Query: 325 EAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
E ++ + G DT N I G+C +G V A +LE++ KG+ T ++ V
Sbjct: 600 ETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVI 659
Query: 385 AGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
G + + + + A S G + + + +S++ G G + +
Sbjct: 660 DGLAKIDRLDEAYMLFEEAKS-----NGLELNVVIYSSLIDGFGKVGRIDE 705
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 130/338 (38%), Gaps = 43/338 (12%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L K K+ +A + + MN K IC +D +G+ A + + D
Sbjct: 448 MIDRLCKAKKLDEACSIFEGMNHK-ICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDS 506
Query: 128 EKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+K Y +L+ + + + + F++M G + N M K G+ K
Sbjct: 507 DKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKG 566
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
+ E+K++ PD SY I I H
Sbjct: 567 RALFEEIKSRGFIPDVMSYSILI------------------------------------H 590
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
+KA + ++ +E+ D YN I + G ++ +L + KT ++
Sbjct: 591 GLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQP 650
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
Y ++++ L K+ +EA + +E + +G + I +++I G+ G + A I+
Sbjct: 651 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIM 710
Query: 366 EDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMK 401
E+L++KG TPN +W + A + C +
Sbjct: 711 EELMQKG--LTPNVYTWNCLLDALVKAEEINEALVCFQ 746
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 16/178 (8%)
Query: 56 NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHA--VQLDLIGRVHG 113
NG ++ V +I K R +A + + + +KG+ P + LD + +
Sbjct: 681 NGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGL---TPNVYTWNCLLDALVKAEE 737
Query: 114 FLSAESYFSNLKDDEKT--YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
A F N+K+ + T + TY L+N R R+ +KA +++M++ G+ +T+TY
Sbjct: 738 INEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTT 797
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
++ +K G + + KA PD+ SY I EG+ R ME+
Sbjct: 798 MIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAII---------EGLSYSRRAMEA 846
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K + T TYG++++ + + D+A F + K G+ L+ + Y+ ++ + K G+ ++
Sbjct: 646 KGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDE 705
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME----SQPHIVLDWSTY 240
++ E+ K + P+ +++ +++ ++ + + M+ + HI TY
Sbjct: 706 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHI-----TY 760
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
+ + + +KA ++ +++ + + I Y +I+ A GN +E L++ K
Sbjct: 761 SILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKA 820
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
+ Y ++E L EA K+ +E + G + T+ A++ + ++
Sbjct: 821 NGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQ 880
Query: 361 AEAILEDLVEKGKAT-TPNSW 380
A + L E K+ SW
Sbjct: 881 AAIVGAVLREIAKSQHAARSW 901
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 170/396 (42%), Gaps = 40/396 (10%)
Query: 32 LYSIISPL----------GNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQA 81
++ ++SP+ G +I LDN N +L + R K++
Sbjct: 101 VFPVLSPMAQDILEFVQKGTDVAKIWESLDNIPSTHNLF--DDLVNVAVQFRMNKKWDLI 158
Query: 82 LEVSDWMNRKGICVFAP---CDHAVQLDLIGRVHGFLSAESYFSNLKDDE--KTYQTYGA 136
+ V +W+ + F P C + + ++ G+ AES + L + + T TY
Sbjct: 159 IPVCEWILYRS--SFRPDIIC-YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYAL 215
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL Y +A +M+E GI + YN + K EK +V MK +
Sbjct: 216 LLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRER 275
Query: 197 IFPDNFSYRICINSYG-ARSDLEGMEII--LREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ ++ + IN YG A+ + M++ ++ + +P+I TY + + + + L
Sbjct: 276 CRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNIC----TYTALVNAFAREGLC 331
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLG---NKSEVLRLWDLEKTACKRYINRDY 310
+KA +V ++ ++ + D YN L+ Y+ G SE+ L ++ C+ Y
Sbjct: 332 EKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSL--MQHMGCEP-DRASY 388
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+++A + G HE+AE V +E + G S + ++ + +G E ++ L +
Sbjct: 389 NILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHK 448
Query: 371 KGKATTPNSWAVVAA--GYFDAGK---TERGFQCMK 401
G TP+++A+ A Y AG+ ER F M+
Sbjct: 449 SG--LTPDTFALNAMLNAYARAGRLDDMERLFAAME 482
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 111/263 (42%), Gaps = 2/263 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y A L+ ++ R T+KA+ +++MK +T T+ ++ +Y K Q V EM
Sbjct: 247 VYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEM 306
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K+ P+ +Y +N++ E E + EM+ H D Y + Y +A L
Sbjct: 307 KSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGL 365
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
AS++ + + D YN L+ Y G + +++ K + ++
Sbjct: 366 PQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHML 425
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+L A + G E+V+ + SG + DT NA++ Y G + + E + + +G
Sbjct: 426 LLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG 485
Query: 373 KATTPNSWAVVAAGYFDAGKTER 395
A ++ V Y AG R
Sbjct: 486 DADV-GTYNVAVNAYGRAGYVGR 507
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E +Y L++ Y R + A + F ++K+ G++ + ++ ++ ++++G + +
Sbjct: 382 EPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEE 441
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
V+ ++ + PD F+ +N+Y L+ ME + ME + D TY A + Y
Sbjct: 442 VMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRGDA--DVGTYNVAVNAY 499
Query: 248 IKANLIDK 255
+A + +
Sbjct: 500 GRAGYVGR 507
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 163/397 (41%), Gaps = 34/397 (8%)
Query: 102 AVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
A ++L+ ++ GF+ ++ TY + + + R D A F +M+
Sbjct: 221 ADAMELLWKLKGFMEGAGILPDV-------YTYSTFIEAHCKARDFDAAKKVFEEMRRRD 273
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
A++ +TYN ++ ++G E+ EM + PD F+Y +N S L+ +
Sbjct: 274 CAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAK 333
Query: 222 IILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+L EM +P+IV+ Y + ++K +A D+LK+ Q + I Y+ L
Sbjct: 334 ALLDEMSCSGLKPNIVV----YGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNL 389
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
I +G +L R Y +++ + + + A ++L E SG
Sbjct: 390 IRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSG- 448
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEA-----ILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
+PN G NGL QN E+ +LE+++ +G +A + G+ G
Sbjct: 449 ----ILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNI 504
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNR 451
+ ++ V PD S++ L G +++ E + A + R ++P +
Sbjct: 505 SLACEALEKMTKANVH-----PDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVP-DE 558
Query: 452 QMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEET 486
Y I + G + D+LL M G+ + +T
Sbjct: 559 FTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADT 595
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 138/298 (46%), Gaps = 12/298 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
YG L++ ++++ +T +A ++M G+ + + Y++++ K GQ + +L EM
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD F+Y + + + D +G +L EM + I+ + +Y + +
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNS-GILPNVYSYGIMINGLCQNGE 468
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
+A ++L++ + + Y LI ++ GN S L LEK K ++ D
Sbjct: 469 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNIS--LACEALEKMT-KANVHPDLFC 525
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++++ L +G EEAE+ + + G D + +I GYC G ++ A+ +L ++
Sbjct: 526 YNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQML 585
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
G +++ + GYF + E+ +++ L G G KPD + ++ L
Sbjct: 586 NSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSML-----GSGDKPDNHIYGIVIRNL 638
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 151/347 (43%), Gaps = 22/347 (6%)
Query: 105 LDLIGRVHGFLSAESYFSNLK-----DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
L +GR+ AE Y++ ++ DE TY L++ Y + +KA R+M
Sbjct: 533 LSTVGRME---EAEEYYAQVQKRGLVPDEFTYS---GLIHGYCKTGNLEKADQLLRQMLN 586
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
G+ + TY D++ Y K+ YEKV +L M PDN Y I I + ++E
Sbjct: 587 SGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEV 646
Query: 220 MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
++L E+E +V D Y+S K ++KA +L + + + + YN LI
Sbjct: 647 AFMVLTEVEKN-GLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALI 705
Query: 280 SLYASLGNKSEVLRLWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
+ G+ S ++D L K + Y +++ K G+ +A + KE G
Sbjct: 706 DGFCRSGDISRARNVFDSILAKGLVPNCVT--YTALIDGNCKNGDITDAFDLYKEMLDRG 763
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+ D + N + G + ++ A + E++ +G A + + + G+ GK
Sbjct: 764 IAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANV-SLFNTLVHGFCKRGK----L 818
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
Q + L V ++ + P+ + + ++S+ G G + + A L+
Sbjct: 819 QETEKLLHVMMD-REIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQ 864
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 133/349 (38%), Gaps = 64/349 (18%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +LN + R +K LS F ++K + + G K D+L EM
Sbjct: 274 YTTVLNGFAEIRDEEKCLSFFHRLK----------------VSPQAGNMAKALDILEEMD 317
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKA 250
+ P+ Y + ++ Y D + +M S +P IV+ Y H + KA
Sbjct: 318 KHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVI----YNILVHAFCKA 373
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+DKA VL+ E Y ++ Y GN + L ++D KTA R Y
Sbjct: 374 GRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSY 433
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY------------------ 352
++L L K + E A +L E +G RI A+ GY
Sbjct: 434 NSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKK 493
Query: 353 -----------------CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG-YFDAGKTE 394
CN+G + A + + + + G ++ + G Y AG+ E
Sbjct: 494 ENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVE 553
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
+ + A +E G KPD + S+++ G G +D+EA +A +
Sbjct: 554 EAEELVSA-----MERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKM 597
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T +TY ++L+ YV+ KAL F ++K G+ ++YN ++ +K Q E +L
Sbjct: 394 TIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLML 453
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM A + P Y Y D+E + + M+ + ++ +D Y +
Sbjct: 454 NEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKE-NLAIDIVAYGALLKACCN 512
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ + A++V ++ + G+ +N +
Sbjct: 513 SGAMHGAAEVFQQITDA-----GLKHNQIT------------------------------ 537
Query: 310 YITMLE-ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y TML+ A + G EEAE+++ E G DT I N++I Y +G ++ EA+L +
Sbjct: 538 YCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKM 597
Query: 369 VE-KGKATTPN 378
V+ K T P+
Sbjct: 598 VKSSSKQTKPD 608
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/405 (19%), Positives = 161/405 (39%), Gaps = 43/405 (10%)
Query: 76 KRFSQALEVSDWMNRKGICVFAPCD------HAVQLDLIGRVHGFLSAESYFSNLKDD-- 127
+RF + +E+ K + F D + + +D R ++A + F ++
Sbjct: 103 QRFRETMEIDAGNWHKIVNAFQVIDKPVLREYGLLVDFYARHGDKVAARATFEAMRASHI 162
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+ Y +L++ Y R + A++ +M GI L+ + I+ Y+ G E
Sbjct: 163 KPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEH 222
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
+ KA+N+ P Y + +Y ++E +E +L +ME +
Sbjct: 223 WFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEG---------------- 266
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS---EVLRLWDLEKTACKR 304
+ NL + VL E +++ + + + + GN + ++L D + +
Sbjct: 267 FQGNL-GLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALDILEEMDKHGVSPNK 325
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
I Y +++ + G+ A KV ++ +G D I N ++ +C G + A +
Sbjct: 326 MI---YAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGV 382
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITS 422
LE++ T ++ + GY G ++ AL V+ ++ G +P S
Sbjct: 383 LENIEANRLLPTIETYTSILDGYVKGGNIQK-------ALEVFDRIKTAGLRPGVVSYNS 435
Query: 423 ILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNG 465
+LS L +++ + + V+P R +Y A + R G
Sbjct: 436 LLSGLAKARQMENARLMLNEMLANGVVPSER-IYTALTEGYARTG 479
>gi|242037185|ref|XP_002465987.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
gi|241919841|gb|EER92985.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
Length = 480
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 15/283 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCD---HAVQLDLIGRVHGFLSAESYFSNL 124
+I K +RF V D M+ GI C+ H +D G+ F E S +
Sbjct: 203 LINCCAKSRRFDLIPAVLDEMSYLGI----ECNSVIHNAIIDGYGKAAMFEEMEGALSAM 258
Query: 125 KDDEKTYQ---TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
+ T +++ Y +TD+ + + + MG+ T T+N ++ Y K G
Sbjct: 259 LESGSNVPDIYTMNSVIGAYGNHGRTDEMEKSYSEFQLMGVEPDTKTFNIMIKSYGKAGM 318
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
Y+K+ + MK + P ++ I +G ++E ME R M+ Q + + TY
Sbjct: 319 YDKMMSIFRYMKKRFFSPTAVTFNTVIECFGRAGNIEKMEYYFRLMKIQ-GVKPNPITYC 377
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
S + Y KA L+DK ++++ E D +N +IS YA G+ + + L K
Sbjct: 378 SLVNGYSKAGLLDKVPGIIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQLMKEK 437
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
+ Y TM++A G +EA ++L E+ +D R+
Sbjct: 438 KCKPDKITYATMIQAYTAQG-MDEAARLL---EMEAERFDKRL 476
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 115/263 (43%), Gaps = 2/263 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+NC + R+ D + +M +GI +++ +N I+ Y K +E++ L+ M
Sbjct: 199 TFSVLINCCAKSRRFDLIPAVLDEMSYLGIECNSVIHNAIIDGYGKAAMFEEMEGALSAM 258
Query: 193 -KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
++ + PD ++ I +YG + ME E + + D T+ Y KA
Sbjct: 259 LESGSNVPDIYTMNSVIGAYGNHGRTDEMEKSYSEFQLM-GVEPDTKTFNIMIKSYGKAG 317
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+ DK + + ++R + +N +I + GN ++ + L K + Y
Sbjct: 318 MYDKMMSIFRYMKKRFFSPTAVTFNTVIECFGRAGNIEKMEYYFRLMKIQGVKPNPITYC 377
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+++ K G ++ ++++ E + DT N VI Y +G ++ E +L+ + EK
Sbjct: 378 SLVNGYSKAGLLDKVPGIIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQLMKEK 437
Query: 372 GKATTPNSWAVVAAGYFDAGKTE 394
++A + Y G E
Sbjct: 438 KCKPDKITYATMIQAYTAQGMDE 460
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 137/334 (41%), Gaps = 44/334 (13%)
Query: 63 GELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFS 122
G +++ +R AL V D M+R IGRV G S
Sbjct: 157 GVFDMLMKAFAERGMTKHALYVFDEMSR-----------------IGRVPGLRSCSFLLG 199
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
L V++ + A+ F ++ GI + ++ + + G+
Sbjct: 200 KL-----------------VQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRV 242
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
+ +VL +M + + P+ +Y +N Y R D EG+E +LR M S+ + + T
Sbjct: 243 DVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLM-SERGVSRNVVTCTM 301
Query: 243 AAHFYIKANLIDKASDVLKKAEE-RLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
Y K +D+A +L++ EE L D Y L+ Y +G + +R+ D E
Sbjct: 302 LMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRD-EMLR 360
Query: 302 CKRYINRDYI-TMLEALMKLGEHEEAEKV---LKEWELSGNSYDTRIPNAVIIGYCNNGL 357
+N T+++ KLG+ EAE+V + +W L + Y N ++ GYC G
Sbjct: 361 VGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSY---NTLLDGYCREGK 417
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
V A + E+++ G T ++ V G D G
Sbjct: 418 VSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVG 451
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 133/313 (42%), Gaps = 27/313 (8%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
++N + + + D A+ KM + G+ + +TYN ++ Y G +E V VL M +
Sbjct: 232 VVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERG 291
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ + + + + Y + ++ E +LRE+E +V+D Y Y + + +
Sbjct: 292 VSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQ---MGRM 348
Query: 257 SDVLKKAEERLE---QKDGIGYNFLISLYASLGNKSEVLRL------WDLEKTACKRYIN 307
D ++ +E L + + + N LI Y LG E R+ W+L K C
Sbjct: 349 EDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNL-KPDCY---- 403
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+L+ + G+ +A + +E G + N VI G + G +A +
Sbjct: 404 -SYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHL 462
Query: 368 LVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+VE+G TPN S + +F G ++R K L G+G+ +++S
Sbjct: 463 MVERG--VTPNEISCCTMLDCFFKMGDSDRAMMLWKEIL-----GRGFTKSTVAFNTMIS 515
Query: 426 KLGDEGSVQDVEA 438
L G + + A
Sbjct: 516 GLCKMGKLMEAGA 528
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 115/293 (39%), Gaps = 55/293 (18%)
Query: 117 AESYFSNLKDDEKTY---QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
AE +++DE + YG L++ Y + + + A+ +M +G+ ++ + N ++
Sbjct: 315 AEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLI 374
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
Y K GQ + V M N+ PD +SY ++ Y RE
Sbjct: 375 KGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGY------------CRE------- 415
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGI-----GYNFLISLYASLGNK 288
K S EE L DGI YN +I +G+
Sbjct: 416 --------------------GKVSKAFMLCEEML--GDGITPTVVTYNTVIKGLVDVGSY 453
Query: 289 SEVLRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
+ L LW L +R + + I TML+ K+G+ + A + KE G + T
Sbjct: 454 DDALHLWHL---MVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAF 510
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
N +I G C G + A A+ + + E G + ++ ++ GY G + FQ
Sbjct: 511 NTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQ 563
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
+ YN + K+G+ ++ VL+ + ++ PDNF+Y I++ +++ LR+
Sbjct: 718 IVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDE-AFKLRD 776
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
+ ++ + + Y + + K ID+A + K ++ + + YN LI Y +G
Sbjct: 777 EMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIG 836
Query: 287 NKSEVLRL 294
+ + RL
Sbjct: 837 DLDKASRL 844
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 115/307 (37%), Gaps = 37/307 (12%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
L DE TY+T L + Y + +A M+ ++ S YN ++ K +
Sbjct: 538 LSPDEITYRT---LSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLN 594
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG-----MEIILREME---------- 228
V D+L EM+ + + P+ +Y I+ + L+ E+I R
Sbjct: 595 DVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIV 654
Query: 229 ---------SQPHIVLD-------WSTYASAAHFYIKANLI---DKASDVLKKAEERLEQ 269
S+ ++LD + + + +K +L K +D L K++
Sbjct: 655 SSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSL 714
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
+ I YN I G E + + + N Y T++ A G +EA K+
Sbjct: 715 SNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKL 774
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
E G + I NA+I G C G + A+ + L +KG ++ ++ Y
Sbjct: 775 RDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCR 834
Query: 390 AGKTERG 396
G ++
Sbjct: 835 IGDLDKA 841
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 163/399 (40%), Gaps = 31/399 (7%)
Query: 111 VHGFLS------AESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+HGF A F +K+D TY L+ + + +AL F +M E GI
Sbjct: 267 IHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGI 326
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+ TY ++ + K G+ ++ ++L+ M K + + I+ Y R +E
Sbjct: 327 EPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAIC 386
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+L M+ + + TY + + +D+A +L K E + + YN LI
Sbjct: 387 VLDSMKLNK-VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIH-- 443
Query: 283 ASLGNKSEVLRLWDLEKTACKRYI---NRDYITMLEALMKLGEHEEAEKV---LKEWELS 336
L V W L K R + ++ L K+G+ E+A +V LKE
Sbjct: 444 -GLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAE 502
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
N + + A+I GYC +A + + ++ +G ++ V+ G GK E
Sbjct: 503 ANEF---LYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVE-- 557
Query: 397 FQCMKAALSVYVEGK-GWKPDPKVITSILSKLGDEGSVQDVEAFV-AALRTVIPMNRQMY 454
A V V GK KP T ++ ++ E F+ + + N Y
Sbjct: 558 ----DAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTY 613
Query: 455 HAFIKANIRNGKGV--DELLDSMKADGIDEDEETKEILV 491
AFIKA R G+ + +E++ +K +GI D ++LV
Sbjct: 614 TAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLV 652
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 35/320 (10%)
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
D + T TY L+ +R+ D+A +M G + +TY + Y + G+ +
Sbjct: 570 DAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEA 629
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
+++ ++K + I D+F Y + +N+YG L+ +L M D S
Sbjct: 630 EEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRM-------FDTGCEPSRQT 682
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE------- 298
+ I +LK K+G+G + L S S+ N + + ++ D E
Sbjct: 683 YSI----------LLKHLIFEKYNKEGMGLD-LNSTNISVDN-ANIWKIADFEIITMLFE 730
Query: 299 ---KTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
+ C +N Y +++ L K+ A ++ + SG S I N+++ C
Sbjct: 731 KMVEQGCVPNVNT-YSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKL 789
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
G+ + A +L+ ++E S+ ++ G F+ G E+ + ++ LS G+
Sbjct: 790 GMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSC-----GYNY 844
Query: 416 DPKVITSILSKLGDEGSVQD 435
D V +L L +G V +
Sbjct: 845 DEVVWKVLLDGLVRKGYVDE 864
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 73/382 (19%), Positives = 146/382 (38%), Gaps = 23/382 (6%)
Query: 121 FSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
F ++ +D E ++ ++N + + A ++F + + G + TY ++ Y K
Sbjct: 178 FKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCK 237
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDW 237
+ V M + + SY I+ + + E +E+ + E D
Sbjct: 238 IHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDG--CFPDV 295
Query: 238 STYASAAHFYIKANLIDKASDVLKKAEERLE---QKDGIGYNFLISLYASLGNKSEVLRL 294
TY + + + K ++ LK EE +E + + Y LI + +G E + +
Sbjct: 296 PTYTVLVAAFCE---VGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEM 352
Query: 295 WD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
LEK + + +++ K G E+A VL +L+ ++R N +I G+
Sbjct: 353 LSTMLEKGLVSSVV--PFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGF 410
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
C + A A+L + E + ++ + G A + ++ L + G
Sbjct: 411 CRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWR-----LHHLMIKDG 465
Query: 413 WKPDPKVITSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGKGVDE- 470
+ PD + + + L G V+ +L+ N +Y A I + K D
Sbjct: 466 FVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAH 525
Query: 471 -LLDSMKADGIDEDEETKEILV 491
L M +G + T +L+
Sbjct: 526 LLFKRMLFEGCFPNSITFNVLL 547
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 161/371 (43%), Gaps = 17/371 (4%)
Query: 35 IISPLGNPG--TRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKG 92
II+ LG G + L+N K+G + V +I R+ +A+ V M +G
Sbjct: 4 IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 93 ICVFAPCDHAVQLDLIGRV-HGFLSAESYFSNLKD-----DEKTYQTYGALLNCYVRQRQ 146
C + V L++ G++ + F +K+ DE TY T L+ C R
Sbjct: 64 -CKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNT---LITCCRRGSL 119
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
++A + F MK MG +TYN ++ +Y K+ + ++ +VL EM+ P +Y
Sbjct: 120 YEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNS 179
Query: 207 CINSYGARSDL--EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE 264
I++Y AR L E ME L+ + I LD TY + +++ + A V ++
Sbjct: 180 LISAY-ARDGLLEEAME--LKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMR 236
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHE 324
+ + +N LI ++ + G +E++++++ K C + T+L + G
Sbjct: 237 TAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDS 296
Query: 325 EAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
E V KE + G + N +I Y G A A+ + +++ G +++ V
Sbjct: 297 EVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVL 356
Query: 385 AGYFDAGKTER 395
A G E+
Sbjct: 357 AALARGGLWEQ 367
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 163/408 (39%), Gaps = 37/408 (9%)
Query: 57 GNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLS 116
G K + +I+ R +F++ ++V + + IC P V + + V G
Sbjct: 239 GCKPNICTFNALIKMHGNRGKFAEMMKVFEEIK---ICCCVP--DIVTWNTLLAVFGQNG 293
Query: 117 AESYFSNLKDDEKTY------QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYN 170
+S S + + K TY L++ Y R D+A++ +++M + GI TYN
Sbjct: 294 MDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYN 353
Query: 171 DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES- 229
++ ++ G +E+ +L EM+ P+ ++ +++Y ++ M + E+ S
Sbjct: 354 AVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSG 413
Query: 230 --QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY-------NFLIS 280
+PH VL + L++ D+L +AE + G+ N +I+
Sbjct: 414 VIEPHAVLLKTLV-----------LVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIA 462
Query: 281 LYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
+Y ++ + + K + Y +++ + E +E+VLKE G
Sbjct: 463 IYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKP 522
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCM 400
D N VI YC NG ++ A I ++ E G ++ A Y E
Sbjct: 523 DIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAID-- 580
Query: 401 KAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIP 448
+ Y+ G KP+ S++ D F+++L + P
Sbjct: 581 ---VVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFISSLHELDP 625
>gi|356509257|ref|XP_003523367.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Glycine max]
Length = 631
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 168/399 (42%), Gaps = 29/399 (7%)
Query: 111 VHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRK-MKEMGIALSTLTY 169
+H F++ N+ +QTY L+C R+ D AL H+++ + + + S TY
Sbjct: 150 LHRFITQAGVVPNIITHNLVFQTY---LDC----RKPDTALEHYKQFLNDAPMNPSPTTY 202
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM-E 228
++ + E+ D+ TEM +K PD Y + + SD + + + E+ E
Sbjct: 203 RVLIKGLIDNSKLERAMDIKTEMDSKGFAPDPLVYHYLMLGHARVSDGDAILRLYEELRE 262
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
+V D + Y + +A + ++A + ++ +GYN ++ + G
Sbjct: 263 RLGGVVQDGIVFGCLMKGYFVKGMEKEAMECYEEALGK-KKMSAVGYNSVLDALSKNGRF 321
Query: 289 SEVLRLWDL---EKTACKRY-INR-DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
E LRL+D E KR +N + +++ G EEA +V ++ S DT
Sbjct: 322 DEALRLFDRMMKEHEPLKRLSVNLGSFNVIVDGYCDEGRFEEAMEVFRKMGEYRCSPDTL 381
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAA 403
N +I C+NG + AE + ++ KG + ++ ++ F + + AA
Sbjct: 382 SFNNLIDRLCDNGRIVEAEEVYGEMEGKGVSPDEFTYGLLMDACFRENRADDA-----AA 436
Query: 404 LSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIR 463
+ G +P+ V ++ L G + + + F + + M+ Y +K
Sbjct: 437 YFRKMVDSGLRPNLAVYNRLVGGLVKVGKIDEAKGFFELMVKKLKMDVTSYQFIMKVLSD 496
Query: 464 NG------KGVDELLDSMKADGIDEDEETKEILVCTMEK 496
G K VD LLD +G+D DEE +E + + K
Sbjct: 497 EGRLDEMLKIVDTLLDD---NGVDFDEEFQEFVKGELRK 532
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 95/203 (46%), Gaps = 3/203 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
++ +++ Y + + ++A+ FRKM E + TL++N+++ G+ + +V EM
Sbjct: 347 SFNVIVDGYCDEGRFEEAMEVFRKMGEYRCSPDTLSFNNLIDRLCDNGRIVEAEEVYGEM 406
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ K + PD F+Y + +++ + + R+M + + + Y +K
Sbjct: 407 EGKGVSPDEFTYGLLMDACFRENRADDAAAYFRKM-VDSGLRPNLAVYNRLVGGLVKVGK 465
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
ID+A + ++L+ D Y F++ + + G E+L++ D + ++
Sbjct: 466 IDEAKGFFELMVKKLKM-DVTSYQFIMKVLSDEGRLDEMLKIVDTLLDDNGVDFDEEFQE 524
Query: 313 MLEA-LMKLGEHEEAEKVLKEWE 334
++ L K G EE K+++E E
Sbjct: 525 FVKGELRKEGREEELTKLMEEKE 547
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 155/365 (42%), Gaps = 18/365 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG L+ D A+ +M E GI + + Y+ ++ Y KTG++E V V EM
Sbjct: 131 TYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEM 190
Query: 193 KAKNIFPDNFSYRICINS---YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ I PD Y I+S +G + ++ E +P++V TY + K
Sbjct: 191 SGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVV----TYNVLINSMCK 246
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ +A D+ K E+ Q D + YN LI+ +S+ E + L + E + + D
Sbjct: 247 EGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLE-EMMQGETRVRPD 305
Query: 310 YIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+T ++ L K+G +A +V +G + N +I G V+ A +++
Sbjct: 306 LMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMD 365
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
++ G +++++ G+ + ER ++ LS + +G +P+P +L
Sbjct: 366 EMASSGLQPDSFTYSILINGFCKMRQVERA----ESYLS-EMRHQGMEPEPVHYIPLLKA 420
Query: 427 LGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDE 484
+ D+G + + ++ Y I ++G K +E L M +G+ D
Sbjct: 421 MCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDA 480
Query: 485 ETKEI 489
T I
Sbjct: 481 VTYSI 485
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 133/346 (38%), Gaps = 60/346 (17%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E TY L+N ++ +AL + M E G+ +TYN ++ S + ++
Sbjct: 231 EPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMA 290
Query: 188 VLTEMKA--KNIFPDNFSYRICINSY-------------------GARSDLEGMEI---- 222
+L EM + PD ++ I+ G R +L +
Sbjct: 291 LLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGG 350
Query: 223 ------------ILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
++ EM S QP D TY+ + + K +++A L + +
Sbjct: 351 LLRVHKVKKAMELMDEMASSGLQP----DSFTYSILINGFCKMRQVERAESYLSEMRHQG 406
Query: 268 EQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAE 327
+ + + Y L+ G + L++ CK Y TM+ K GE + AE
Sbjct: 407 MEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCK-LDAAAYSTMIHGAFKSGEKKIAE 465
Query: 328 KVLKEWELSGNSYDTRIPNAV-----IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
+ LK+ G IP+AV I + +G + AE +L+ + G +
Sbjct: 466 EFLKDMIDEG-----LIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDS 520
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
+ GY G TE+ + L+ + K DPK+I++I++ LG
Sbjct: 521 LIQGYGAKGDTEKILE-----LTREMTAKDVALDPKIISTIVTSLG 561
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 15/230 (6%)
Query: 270 KDGIGYNFLISLYASLGNKSE---VLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+D + YN +++ G +LR+ E R Y T++ AL +A
Sbjct: 54 RDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQA 113
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
+L+ + G D +I G C+ V A +L ++ E G ++ + G
Sbjct: 114 VGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHG 173
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--R 444
Y G+ E + + + G+G +PD + T+++ L G V+ + + R
Sbjct: 174 YCKTGRWESVGKVFEE-----MSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTER 228
Query: 445 TVIPMNRQMYHAFIKANIRNGKGVDELLD---SMKADGIDEDEETKEILV 491
+ P N Y+ I + + G V E LD +M G+ D T L+
Sbjct: 229 GLEP-NVVTYNVLINSMCKEGS-VREALDLRKNMSEKGVQPDVVTYNTLI 276
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 141/378 (37%), Gaps = 58/378 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKE---MGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+Y +L RQ D AL R M + + ++Y +M + + +L
Sbjct: 58 SYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLL 117
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM-ES--QPHIVLDWSTYASAAHF 246
M+ + PD +Y I +D++ +L EM ES +P++V+ Y+ H
Sbjct: 118 RSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVV----YSCLLHG 173
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y K + V ++ R + D + Y LI G + R+ D+ +R +
Sbjct: 174 YCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMT---ERGL 230
Query: 307 NRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ +T ++ ++ K G EA + K G D N +I G + + A A
Sbjct: 231 EPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMA 290
Query: 364 ILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
+LE++++ P+ ++ V G G + Q +
Sbjct: 291 LLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQ---------------------VR 329
Query: 422 SILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGID 481
+++++ G ++ + L V + + M EL+D M + G+
Sbjct: 330 AMMAENGCRCNLVAFNLLIGGLLRVHKVKKAM----------------ELMDEMASSGLQ 373
Query: 482 EDEETKEILV---CTMEK 496
D T IL+ C M +
Sbjct: 374 PDSFTYSILINGFCKMRQ 391
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
N K D Y T +++ + + A + M + G+ +TY+ + +++K+G
Sbjct: 440 NCKLDAAAYST---MIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDL 496
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
VL +M A PD + I YGA+ D E + + REM ++
Sbjct: 497 AAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAK 544
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 130/303 (42%), Gaps = 8/303 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ + R + D+A M+E G+ + +T+N ++ K G+ E V EM
Sbjct: 194 TYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEM 253
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD SY + Y + EM ++ I+ D T+ S H KA
Sbjct: 254 VKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEM-TRKGIMPDVVTFTSLIHVMCKAGN 312
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-RDYI 311
+++A ++++ ER Q + I + LI + G + L L E C+ + Y
Sbjct: 313 LERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDAL-LAVREMRQCRIQPSVVCYN 371
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++ +G +EA ++++E E G D + ++ YC NG +A + + ++E
Sbjct: 372 ALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLEN 431
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G +++ + + + K +S+ G +PD TS++ EG
Sbjct: 432 GVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISL-----GLQPDEVTYTSLIDGHCKEG 486
Query: 432 SVQ 434
+V+
Sbjct: 487 NVE 489
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 155/367 (42%), Gaps = 26/367 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ AL++ + ++ D AL R+M++ I S + YN ++ Y G+ ++ +++ EM
Sbjct: 334 TFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM 393
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+AK + PD +Y +++Y D L + + ++ D TY+S +
Sbjct: 394 EAKGVKPDVVTYSTILSAYCKNGDTHS-AFQLNQQMLENGVLPDAITYSSLIRVLCEEKR 452
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A + K Q D + Y LI + GN L L D A Y
Sbjct: 453 LGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSV 512
Query: 313 MLEALMKLGEHEEAEKVL----KEWELSGN-SYDTRIPN----------AVIIGYCNNGL 357
++ L K +EA+++L E + N YD + A++ G+C GL
Sbjct: 513 LINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGL 572
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP 417
+ A+ + + ++++ + ++V+ G+ G + K L G+ P+
Sbjct: 573 MNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQC-----GFAPNS 627
Query: 418 KVITSILSKLGDEGSVQDVEAFVAALRTVIPM-NRQMYHAFIKANIRNGKGVDELLD--- 473
S++ L ++G V + + + L + + + A I N++ G VD +LD
Sbjct: 628 TSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGN-VDAVLDVLH 686
Query: 474 SMKADGI 480
M DG+
Sbjct: 687 GMARDGL 693
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 154/392 (39%), Gaps = 23/392 (5%)
Query: 116 SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
SA +F ++ D TY L+ + +ALS R M+ G + +TYN ++
Sbjct: 140 SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLV 199
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
+ + G+ ++ ++ M+ + P+ ++ +N +E + EM + +
Sbjct: 200 AAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKE-GL 258
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
D +Y + Y K +A V + + D + + LI + GN R
Sbjct: 259 APDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLE---R 315
Query: 294 LWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
L + +R + + IT +++ K G ++A ++E NA+I
Sbjct: 316 AVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALIN 375
Query: 351 GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG 410
GYC G + A ++ ++ KG +++ + + Y G T FQ + L
Sbjct: 376 GYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLE----- 430
Query: 411 KGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ----MYHAFIKANIRNG- 465
G PD +S++ L +E + D + +I + Q Y + I + + G
Sbjct: 431 NGVLPDAITYSSLIRVLCEEKRLGDAHVL---FKNMISLGLQPDEVTYTSLIDGHCKEGN 487
Query: 466 -KGVDELLDSMKADGIDEDEETKEILVCTMEK 496
+ L D M G+ D T +L+ + K
Sbjct: 488 VERALSLHDEMVKAGVLPDVVTYSVLINGLSK 519
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 155/371 (41%), Gaps = 46/371 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG ++N ++ TD AL+ KM+ I + +N I+ K + ++ EM
Sbjct: 189 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 248
Query: 193 KAKNIFPDNFSYR---ICINSYGARSDLEGMEIILREMESQPHIVL-------------- 235
+ K I P+ +Y C+ SYG SD + + E + P++V
Sbjct: 249 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 308
Query: 236 -----------------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
D TY S + + + +DKA + + + D + YN L
Sbjct: 309 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 368
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWEL 335
I + + L+ + R + D Y T+++ L G+ + A+KV K+
Sbjct: 369 IKGFCKSKRVEDGTELF---REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 425
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G D + ++ G CNNG ++ A + + + + + + G AGK +
Sbjct: 426 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 485
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM-NRQMY 454
G+ + +LS+ KG KP+ +++S L + +Q+ A + ++ P+ N Y
Sbjct: 486 GWD-LFCSLSL----KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 540
Query: 455 HAFIKANIRNG 465
+ I+A++R+G
Sbjct: 541 NTLIRAHLRDG 551
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 149/346 (43%), Gaps = 19/346 (5%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MCLYSKTGQYEK 184
E + T +LLN Y ++ A++ +M EMG T+T+ + + L++K +
Sbjct: 114 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 173
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
+ D M + P+ +Y + +N R D + +L +ME+ I D + +
Sbjct: 174 LVD---RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA-AKIEADVVIFNTII 229
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K +D A ++ K+ E + + + + Y+ LIS S G S+ +L ++
Sbjct: 230 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL---SDMIEK 286
Query: 305 YINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
IN + +T +++A +K G+ EAEK+ + D N+++ G+C + + A
Sbjct: 287 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 346
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
+ + E +V K ++ + G+ + + E G + + + +G D T
Sbjct: 347 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE-----MSHRGLVGDTVTYT 401
Query: 422 SILSKLGDEGSVQDVE-AFVAALRTVIPMNRQMYHAFIKANIRNGK 466
+++ L +G + + F + +P + Y + NGK
Sbjct: 402 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 447
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 104/244 (42%), Gaps = 13/244 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ LL+ + ++ D +S KM+ + I TYN ++ + + Q +L +M
Sbjct: 50 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 109
Query: 194 AKNIFPDNFSYRICINSY--GAR-SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
P + +N Y G R SD + + EM +P D T+ + H
Sbjct: 110 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP----DTITFTTLIHGLFLH 165
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
N +A ++ + +R Q + + Y +++ G+ L L + + A I D
Sbjct: 166 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA---KIEADV 222
Query: 311 I---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
+ T++++L K ++A + KE E G + +++I C+ G +A +L D
Sbjct: 223 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 282
Query: 368 LVEK 371
++EK
Sbjct: 283 MIEK 286
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 156/370 (42%), Gaps = 24/370 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---CLYSKTGQYEKVPDVL 189
T+ ++N + + +KA MK G + + ++YN ++ C G+ K VL
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHF 246
EM ++ P+ ++ I I+ + +L G + +EM Q P+++ +Y S +
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI----SYNSLING 340
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
I +A + K Q + I YN LI+ + E L ++ K
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
R Y +++A KLG+ ++ + +E E G D N +I G C NG ++ A+ + +
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
Query: 367 DLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
L KG P+ ++ ++ GY G++ + +K + G KP ++
Sbjct: 461 QLTSKG---LPDLVTFHILMEGYCRKGESRKAAMLLKE-----MSKMGLKPRHLTYNIVM 512
Query: 425 SKLGDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNGKGVDE--LLDSMKADGI 480
EG+++ + + MN Y+ ++ + GK D LL+ M G+
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
Query: 481 DEDEETKEIL 490
+ T EI+
Sbjct: 573 VPNRITYEIV 582
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 36/259 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+N + + +AL F +K G +T YN ++ Y K G+ + + EM
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + I PD +Y I ++E + + ++ S+ + D T+ Y +
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG--LPDLVTFHILMEGYCRKGE 485
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
KA+ +LK+ + + + YN ++ Y GN
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGN------------------------- 520
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
L+A + E E+ L+ ++ SY N ++ GY G +++A +L +++EKG
Sbjct: 521 -LKAATNMRTQMEKERRLR---MNVASY-----NVLLQGYSQKGKLEDANMLLNEMLEKG 571
Query: 373 KATTPNSWAVVAAGYFDAG 391
++ +V D G
Sbjct: 572 LVPNRITYEIVKEEMVDQG 590
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 149/371 (40%), Gaps = 21/371 (5%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY A+++ ++ + A F +M+ MG+ +TYN ++ Y K G ++ +
Sbjct: 1224 TVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLF 1283
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHF 246
+++ + P +Y I I+ Y DLE I+ EM Q P++ TY
Sbjct: 1284 GDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVC----TYTILMKG 1339
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
+ + A + + + Q D YN I LG ++ R ++L + I
Sbjct: 1340 SLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILG---DIARAFELREVLMLEGI 1396
Query: 307 NRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ D +T ++ L K G ++A+++ + +G D +I +C GL++ A
Sbjct: 1397 SSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARK 1456
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
I +++ G + ++ V+ Y G + + L +G +P+ +
Sbjct: 1457 IFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLE-----EGVEPNEITYNVL 1511
Query: 424 LSKLGDEGSVQ-DVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDEL--LDSMKADGI 480
+ L G Q F L + N+ Y I N + G D + M +GI
Sbjct: 1512 IHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGI 1571
Query: 481 DEDEETKEILV 491
D T + L+
Sbjct: 1572 HPDYLTHKALL 1582
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 17/213 (7%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIAL--STLTYNDIMCLYSKTGQYEKV 185
E + TY LL+ ++++ + DK ++M+ G + +TYN ++ ++ G E+
Sbjct: 1116 EPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEA 1175
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYAS 242
+++ M+ +F+Y I AR ++ + + EME++ P +V TY +
Sbjct: 1176 AELVEGMRLSKK-ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVV----TYNA 1230
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQ--KDGIGYNFLISLYASLGNKSEVLRLW-DLEK 299
H +++ L++ A +K AE R D I YN L++ Y GN E L L+ DL +
Sbjct: 1231 MIHGLLQSGLVEAAQ--VKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRR 1288
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
+ Y +++ +LG+ EEA ++LKE
Sbjct: 1289 AGLAPTV-LTYNILIDGYCRLGDLEEA-RILKE 1319
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 111/252 (44%), Gaps = 10/252 (3%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
LS FR+M G+A N ++ + +++ + V EM I P +Y ++
Sbjct: 1068 CLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLD 1127
Query: 210 SYGARSDLEGMEIILREMESQPHIVL-DWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
S+ + + ++L+EME++ L + TY + +++A+++++ RL
Sbjct: 1128 SFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM--RLS 1185
Query: 269 QK-DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHE 324
+K YN LI+ L + V +++DL+ I +T M+ L++ G E
Sbjct: 1186 KKASSFTYNPLIT---GLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVE 1242
Query: 325 EAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
A+ E G D N+++ GYC G ++ A + DL G A T ++ ++
Sbjct: 1243 AAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILI 1302
Query: 385 AGYFDAGKTERG 396
GY G E
Sbjct: 1303 DGYCRLGDLEEA 1314
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 116 SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
SA +F + ++ E TY L++ R +T A HF +M E G+ + TY ++
Sbjct: 1488 SAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLI 1547
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
K G +E EM I PD +++ + +
Sbjct: 1548 DGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585
>gi|297736801|emb|CBI26002.3| unnamed protein product [Vitis vinifera]
Length = 469
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 140/337 (41%), Gaps = 21/337 (6%)
Query: 41 NPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCD 100
P I+ +LD KN K + + DL +K++ QALEV + + +
Sbjct: 89 TPIKNIKKKLDR--KNDAKAWANTVAEALSDLVLKKQWLQALEVFEMLREQPFYQPKEGT 146
Query: 101 HAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
+ L L+G+ L A F + ++ E T + Y ALL Y R D+A S +MK
Sbjct: 147 YMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMK 206
Query: 159 EMG-IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL 217
+ TY+ ++ ++E V + EM ++I P+ + I ++ YG
Sbjct: 207 TLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKF 266
Query: 218 EGMEIILREM----ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE----Q 269
+ ME +L M S+P + W+ + F K + ++++K E+ +
Sbjct: 267 DEMEKVLSGMLESTSSKPDV---WTMNTILSLFGNKGQI-----EIMEKWYEKFRNFGIE 318
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
+ +N LI Y ++ + + + + Y ++EA +G+ + E
Sbjct: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYT 378
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+ G DT+ +I GY N GL AE ++E
Sbjct: 379 FDQMRAEGMKADTKTFCCLIRGYANAGLFHKAEDLIE 415
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E +T+ L+ Y ++R DK S M+++ +T TYN+++ +S G + +
Sbjct: 318 EPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEY 377
Query: 188 VLTEMKAKNIFPDNFSYRICINSYG------ARSDLEGMEIILREMESQPHIVLDWSTYA 241
+M+A+ + D ++ I Y DL ME + M+ + H D +TY+
Sbjct: 378 TFDQMRAEGMKADTKTFCCLIRGYANAGLFHKAEDLIEMERVFNRMKDK-HCQPDSTTYS 436
Query: 242 SAAHFYIKANLIDKASDVLKKAEERL 267
Y K + DK D L++ +R+
Sbjct: 437 IMVEAYKKEGMNDKIYD-LEQERQRM 461
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 12/174 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T +L+ + + Q + + K + GI T T+N ++ Y K Y+K+ V+ M
Sbjct: 288 TMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
Query: 193 KAKNIFP-DNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
+ K FP +Y I ++ D + ME +M ++ + D T+ Y A
Sbjct: 348 R-KLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAE-GMKADTKTFCCLIRGYANAG 405
Query: 252 LIDKASD------VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
L KA D V + +++ Q D Y+ ++ Y G +++DLE+
Sbjct: 406 LFHKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMND---KIYDLEQ 456
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 82/182 (45%), Gaps = 11/182 (6%)
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+L+A + E E + +E ++ + +T N V+ GY G E +L ++
Sbjct: 218 YSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGML 277
Query: 370 EKGKATTPNSWAV--VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
E ++ P+ W + + + + + G+ E M+ + G +P+ + ++
Sbjct: 278 E-STSSKPDVWTMNTILSLFGNKGQIE----IMEKWYEKF-RNFGIEPETRTFNILIGAY 331
Query: 428 GDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKA--NIRNGKGVDELLDSMKADGIDEDE 484
G + + + + +R + P Y+ I+A ++ + K ++ D M+A+G+ D
Sbjct: 332 GKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADT 391
Query: 485 ET 486
+T
Sbjct: 392 KT 393
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 141/338 (41%), Gaps = 42/338 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
++ ++L C ++R+ D+ALS F MK+ S+ TYN I+ + G+ E+ +L EM
Sbjct: 356 SFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS-TYNIIIDMLCLGGRVEEAYRILDEM 414
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ ++FP+ + I ++ LE I E SQ D TY S K
Sbjct: 415 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIF-ESASQRGCNPDCVTYCSLIDGLGKKGQ 473
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACK-------R 304
+D+A + +K + + + Y LI + G K + +++ +L + CK
Sbjct: 474 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNT 533
Query: 305 YIN---------------------------RDYITMLEALMKLGEHEEAEKVLKEWELSG 337
Y++ R Y ++ L K G+ E + + G
Sbjct: 534 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 593
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+ D R NAV+ G+C +G V A ILE++ EK T ++ + G + + +
Sbjct: 594 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAY 653
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
+ A S KG + + + +S++ G G + +
Sbjct: 654 MLFEEAKS-----KGIELNVVLYSSLIDGFGKVGRIDE 686
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 136/313 (43%), Gaps = 21/313 (6%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ Y L+ R+ ++AL R+M+E+G + + ++ ++ GQ ++
Sbjct: 178 AFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALV 237
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
E+K + PD Y +CI+ +G +++ E+++Q + D +Y S K
Sbjct: 238 DEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQ-GLKPDDVSYTSMIWVLCK 296
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINR 308
A + +A ++ + E YN +I Y S G + +L + L + C +
Sbjct: 297 AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVV- 355
Query: 309 DYITMLEALMKLGEHEEA----EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+ ++L L K + +EA E + K+ E + ++Y N +I C G V+ A I
Sbjct: 356 SFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTY-----NIIIDMLCLGGRVEEAYRI 410
Query: 365 LEDLVEKGKATTPNSWAV--VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
L+++ + + PN V + A K E ++ ++A +G PD S
Sbjct: 411 LDEM--EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA-----SQRGCNPDCVTYCS 463
Query: 423 ILSKLGDEGSVQD 435
++ LG +G V +
Sbjct: 464 LIDGLGKKGQVDE 476
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 112/251 (44%), Gaps = 9/251 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L++ ++ Q D+A F KM + G + + Y ++ + G+ E + E+
Sbjct: 460 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 519
Query: 193 KAKNIFPDNF---SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ PD +Y C+ G ++E +I ++ S + D +Y+ H K
Sbjct: 520 IRRGCKPDLTLLNTYMDCVFKAG---EVEKGRMIFEDIRSYGFLP-DVRSYSILIHGLTK 575
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
A + S++ +++ D YN ++ + G + + + K C +
Sbjct: 576 AGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT 635
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ L K+ +EA + +E + G + + +++I G+ G + A ILE+++
Sbjct: 636 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 695
Query: 370 EKGKATTPNSW 380
+KG TPN +
Sbjct: 696 KKG--LTPNVY 704
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 111/277 (40%), Gaps = 38/277 (13%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
++Y L++ + Q + + F MK+ G AL YN ++ + K+G+ K ++L E
Sbjct: 564 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 623
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
MK K + P +Y ++ L+ ++ E +S+ I L+ Y+S + K
Sbjct: 624 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSK-GIELNVVLYSSLIDGFGKVG 682
Query: 252 LIDKAS----------------------DVLKKAEERLEQ-------------KDGIGYN 276
ID+A D L KAEE E + Y+
Sbjct: 683 RIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYS 742
Query: 277 FLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
LI+ + ++ W D++K + Y TM+ L K+G +A + + ++
Sbjct: 743 ILINGLCRVQKYNKAFVFWQDMQKQGLVPNVV-TYTTMISGLAKVGNITDAYSLFERFKA 801
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+G D NA+I G N A + E+ +G
Sbjct: 802 NGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRG 838
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 153/362 (42%), Gaps = 22/362 (6%)
Query: 141 YVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPD 200
YV +T L F++ + LS L+ N ++ K ++ V V EM + I P+
Sbjct: 170 YVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPN 229
Query: 201 NFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDK-- 255
++ IN L ++ +M+ P++V TY + Y K + K
Sbjct: 230 LITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVV----TYNTLIDGYCKMGRVGKMY 285
Query: 256 -ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITML 314
A +LK+ E + + +N LI + N S L++++ ++ + Y +++
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
L G+ EA+ +L E S + NA+I GYC L++ A + +++ ++G
Sbjct: 346 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQG-- 403
Query: 375 TTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
TPN ++ + GY GK E F K L KG+ P+ ++ EG
Sbjct: 404 LTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLE-----KGFLPNASTYNCLIVGFCREGK 458
Query: 433 VQDVEAFVAALRTV-IPMNRQMYHAFIKA--NIRNGKGVDELLDSMKADGIDEDEETKEI 489
+++V+ + ++ + + Y+ I A + K L+D M G+ T I
Sbjct: 459 MEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNI 518
Query: 490 LV 491
L+
Sbjct: 519 LL 520
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 148/339 (43%), Gaps = 20/339 (5%)
Query: 108 IGRVHGFLSAESYFSNLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
+GRV A++ + +++ + T+ L++ + + AL F +M+ G+ +
Sbjct: 278 MGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPT 337
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
+TYN ++ G+ + +L EM + N+ P+ +Y IN Y + LE +
Sbjct: 338 VVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFD 397
Query: 226 EMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+ Q P+++ T+ + H Y K +++A + K E+ + YN LI +
Sbjct: 398 NIGKQGLTPNVI----TFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGF 453
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNS 339
G EV L L + C R + D +T ++ A + E ++A +++ E G
Sbjct: 454 CREGKMEEVKNL--LNEMQC-RGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLK 510
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC 399
N ++ GYC G ++ A + + + ++G+ ++ V+ GY GK E
Sbjct: 511 PSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGL 570
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA 438
+ L KG P+ I ++ ++G + D+E
Sbjct: 571 LNEMLE-----KGLIPNRTTYEIIKEEMMEKGFLPDIEG 604
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 158/380 (41%), Gaps = 44/380 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---CLYSKTGQYEKVPDVL 189
T+ ++N + + +KA MK G + +TYN ++ C + G+ K +L
Sbjct: 232 TFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAIL 291
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHF 246
EM + P++ ++ + I+ + +L + EM+SQ P +V TY S +
Sbjct: 292 KEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVV----TYNSLVNG 347
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
+++A +L + + + I YN LI+ Y E L+D K+ +
Sbjct: 348 LCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFD---NIGKQGL 404
Query: 307 NRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ I T+L K G+ EEA + K G + N +I+G+C G ++ +
Sbjct: 405 TPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKN 464
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
+L ++ +G ++ ++ + + + + ++ + + L KG KP +
Sbjct: 465 LLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLD-----KGLKPSHLTYNIL 519
Query: 424 LSKLGDEGSVQDVEAFVAALRTVIPMNRQM-----------YHAFIKANIRNGKGVDE-- 470
L+ EG+ LR + + +QM Y+ I+ R GK D
Sbjct: 520 LNGYCMEGN----------LRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANG 569
Query: 471 LLDSMKADGIDEDEETKEIL 490
LL+ M G+ + T EI+
Sbjct: 570 LLNEMLEKGLIPNRTTYEII 589
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 106/256 (41%), Gaps = 36/256 (14%)
Query: 30 TTLYSIISPLGNPGTRIEPE--LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDW 87
T S+++ L N G E + LD + + K V +I K+K +A E+ D
Sbjct: 339 VTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDN 398
Query: 88 MNRKGI--------------CVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT 133
+ ++G+ C F + A L + GFL S T
Sbjct: 399 IGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNAS-------------T 445
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L+ + R+ + ++ + +M+ G+ T+TYN ++ + + + +K ++ EM
Sbjct: 446 YNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEML 505
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS---TYASAAHFYIKA 250
K + P + +Y I +N Y +L + ++ME + W+ TY Y +
Sbjct: 506 DKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGR----WANVVTYNVLIQGYCRK 561
Query: 251 NLIDKASDVLKKAEER 266
++ A+ +L + E+
Sbjct: 562 GKLEDANGLLNEMLEK 577
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 154/367 (41%), Gaps = 26/367 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ AL++ + ++ D AL R MK+ I S + YN ++ Y G+ ++ ++L EM
Sbjct: 367 TFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 426
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+AK + PD +Y I++Y D + ++M + ++ D TY+S
Sbjct: 427 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK-GVLPDAITYSSLIRVLCGEKR 485
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A + K + Q D Y LI + GN L L D A Y
Sbjct: 486 LSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSV 545
Query: 313 MLEALMKLGEHEEAEKVL----KEWELSGNS-YDTRIPN----------AVIIGYCNNGL 357
++ L K EA+++L E + N+ YD + A++ G+C GL
Sbjct: 546 LINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGL 605
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP 417
+ A+ + + ++++ + ++V+ G+ AG + K L G+ P+
Sbjct: 606 MNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQ-----GGFAPNS 660
Query: 418 KVITSILSKLGDEGSVQDVEAFVAALRTVIPM-NRQMYHAFIKANIRNGKGVDELLD--- 473
S++ L + G V + + + L + + + A I N+ G VD +LD
Sbjct: 661 TSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGN-VDAVLDVLH 719
Query: 474 SMKADGI 480
M DG+
Sbjct: 720 GMAKDGL 726
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 129/306 (42%), Gaps = 14/306 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ + R + D A M+E G+ + +T+N ++ K G+ E V EM
Sbjct: 227 TYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM 286
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD SY + Y + EM +Q I+ D T+ S H KA
Sbjct: 287 VREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM-TQKGIMPDVVTFTSLIHVMCKAGN 345
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE-VLRLWDLEKTACKRYINRDYI 311
+++A ++++ ER Q + + + LI + G + +L + +++ K + Y
Sbjct: 346 LERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSV-VCYN 404
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++ +G +EA ++L E E G D + +I YC N +A + + ++EK
Sbjct: 405 ALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK 464
Query: 372 G---KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
G A T +S V G F+ M G +PD TS++
Sbjct: 465 GVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKL--------GLQPDEFTYTSLIDGHC 516
Query: 429 DEGSVQ 434
EG+V+
Sbjct: 517 KEGNVE 522
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/389 (19%), Positives = 150/389 (38%), Gaps = 17/389 (4%)
Query: 116 SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
SA +F ++ D TY L+ + +ALS R M+ G + +TYN ++
Sbjct: 173 SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLV 232
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
+ + G+ + ++ M+ + P+ ++ +N +E + EM + +
Sbjct: 233 AAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVRE-GL 291
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
D +Y + Y KA +A V + ++ D + + LI + GN +
Sbjct: 292 APDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVT 351
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
L + + + +++ K G ++A ++ + NA+I GYC
Sbjct: 352 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYC 411
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
G + A +L ++ KG +++ + + Y T F+ + L KG
Sbjct: 412 MVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE-----KGV 466
Query: 414 KPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ----MYHAFIKANIRNG--KG 467
PD +S++ L E + D + +I + Q Y + I + + G +
Sbjct: 467 LPDAITYSSLIRVLCGEKRLSDAHVL---FKNMIKLGLQPDEFTYTSLIDGHCKEGNVES 523
Query: 468 VDELLDSMKADGIDEDEETKEILVCTMEK 496
L D M G+ D T +L+ + K
Sbjct: 524 ALSLHDKMVKAGVLPDVVTYSVLINGLSK 552
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 135/342 (39%), Gaps = 7/342 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++NC + + D+A +M + G T T+N ++ + E+ D+ E+
Sbjct: 337 TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAREL 396
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PD +++ I IN+ D + EM+S D TY
Sbjct: 397 TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSS-GCAPDEVTYNILIDHLCSMGK 455
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A D+LK+ E + + YN +I E ++D + T
Sbjct: 456 LVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNT 515
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ L K ++A +++++ G N+++ YC G ++ A ILE + G
Sbjct: 516 LIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANG 575
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
++ + G AG+T+ + ++ + KG +P PK ++ L +
Sbjct: 576 FEIDVVTYGTLINGLCKAGRTQVALKLLRG-----MRIKGIRPTPKAYNPVIQSLFRRNN 630
Query: 433 VQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVDELLD 473
++D + + V P + Y + R G + E D
Sbjct: 631 LRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 672
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 129/305 (42%), Gaps = 6/305 (1%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T T L+N Y + + + AL + +K G +TYN + + G V+
Sbjct: 264 TRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVM 323
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
M + PD F+Y IN +L+ + I+ +M + + D +T+ +
Sbjct: 324 DLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDR-GCLPDTTTFNTLIVALCS 382
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
N +++A D+ ++ + D +N LI+ +G+ +RL++ K++
Sbjct: 383 QNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVT 442
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ L +G+ A +LKE E +G T N +I C ++ AE + + +
Sbjct: 443 YNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMD 502
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G + + ++ + G A + + + ++ + +G +P SIL+
Sbjct: 503 AHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVK-----EGLQPSNITYNSILTHYCK 557
Query: 430 EGSVQ 434
+G ++
Sbjct: 558 QGDLK 562
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 114/254 (44%), Gaps = 20/254 (7%)
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
DE T+ T L+ ++ + + AL KM E G + + +T N ++ Y K G+ E
Sbjct: 229 DETTFTT---LMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDAL 285
Query: 187 DVLTEMKAKNIFPDNFSYR-----ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
+ + A PD +Y +C N + + + L+ M+++L+E D TY
Sbjct: 286 GYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHA-LKVMDLMLQEGHDP-----DVFTYN 339
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
+ + K +D+A ++ + +R D +N LI S E L DL +
Sbjct: 340 TVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEAL---DLAREL 396
Query: 302 CKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
+ ++ D T ++ AL K+G+ ++ +E + SG + D N +I C+ G +
Sbjct: 397 TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKL 456
Query: 359 QNAEAILEDLVEKG 372
NA +L+++ G
Sbjct: 457 VNALDLLKEMESNG 470
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 89/468 (19%), Positives = 168/468 (35%), Gaps = 56/468 (11%)
Query: 35 IISPLGNPGT--RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALE-VSDWMNRK 91
II LG G +E + + G++ G ++ + + +RF A++ V + +N
Sbjct: 95 IIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTF 154
Query: 92 GICVFAPCDHAVQ---LDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQ 146
G+ D AV L+++ ES ++ + D + T L+ R Q
Sbjct: 155 GV----QADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQ 210
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
A+ +M +A T+ +M + + G E V T+M P + +
Sbjct: 211 VRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNV 270
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
IN Y +E A YI+ + D
Sbjct: 271 LINGYCKMGRVED------------------------ALGYIQKEIADGF---------- 296
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+ D + YN + G+ S L++ DL Y T++ L K GE +EA
Sbjct: 297 --EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
+ ++ + G DT N +I+ C+ ++ A + +L KG + ++ ++
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINA 414
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT- 445
G G + + ++ G PD ++ L G + + + + +
Sbjct: 415 LCKVGDPHLGIRLFEE-----MKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESN 469
Query: 446 VIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETKEILV 491
P + Y+ I A + + +E+ D M A GI T L+
Sbjct: 470 GCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLI 517
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 155/371 (41%), Gaps = 46/371 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG ++N ++ TD AL+ KM+ I + +N I+ K + ++ EM
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 193 KAKNIFPDNFSYR---ICINSYGARSDLEGMEIILREMESQPHIVL-------------- 235
+ K I P+ +Y C+ SYG SD + + E + P++V
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 236 -----------------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
D TY S + + + +DKA + + + D + YN L
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWEL 335
I + V +L + R + D Y T+++ L G+ + A+KV K+
Sbjct: 407 IKGFC---KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G D + ++ G CNNG ++ A + + + + + + G AGK +
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPM-NRQMY 454
G+ + +LS+ KG KP+ +++S L + +Q+ A + ++ P+ N Y
Sbjct: 524 GWD-LFCSLSL----KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 455 HAFIKANIRNG 465
+ I+A++R+G
Sbjct: 579 NTLIRAHLRDG 589
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 149/346 (43%), Gaps = 19/346 (5%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MCLYSKTGQYEK 184
E + T +LLN Y ++ A++ +M EMG T+T+ + + L++K +
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
+ D M + P+ +Y + +N R D + +L +ME+ I D + +
Sbjct: 212 LVD---RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA-AKIEADVVIFNTII 267
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K +D A ++ K+ E + + + + Y+ LIS S G S+ +L ++
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL---SDMIEK 324
Query: 305 YINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
IN + +T +++A +K G+ EAEK+ + D N+++ G+C + + A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
+ + E +V K ++ + G+ + + E G + + + +G D T
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE-----MSHRGLVGDTVTYT 439
Query: 422 SILSKLGDEGSVQDVE-AFVAALRTVIPMNRQMYHAFIKANIRNGK 466
+++ L +G + + F + +P + Y + NGK
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 104/244 (42%), Gaps = 13/244 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ LL+ + ++ D +S KM+ + I TYN ++ + + Q +L +M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 194 AKNIFPDNFSYRICINSY--GAR-SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
P + +N Y G R SD + + EM +P D T+ + H
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP----DTITFTTLIHGLFLH 203
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
N +A ++ + +R Q + + Y +++ G+ L L + + A I D
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA---KIEADV 260
Query: 311 I---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
+ T++++L K ++A + KE E G + +++I C+ G +A +L D
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 368 LVEK 371
++EK
Sbjct: 321 MIEK 324
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 139/294 (47%), Gaps = 13/294 (4%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ-YEKVPDVLTEMKA 194
A++N + + D+A+ F+KMKE G +T TYN ++ + G+ YE + + +
Sbjct: 135 AMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQD 194
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKAN 251
+N+ P++ +Y I I ++ + LE +L +M + QP +V TY + A Y +
Sbjct: 195 ENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVV----TYNTMARAYAQNG 250
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+KA ++ K + + + +IS Y GN +E LR K +
Sbjct: 251 ETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFN 310
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++++ + + ++ L E G D + ++ + + GL+ N E I D+V+
Sbjct: 311 SLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKA 370
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
G ++++++A GY AG+ R + + ++S Y G + + + T+I+S
Sbjct: 371 GIEPDIHAYSILAKGYVRAGQ-PRKAESLLTSMSKY----GVQTNVVIFTTIIS 419
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 159/369 (43%), Gaps = 30/369 (8%)
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
+T L+N + + + +A + F + E G + +TY ++ ++ +++ +P +
Sbjct: 58 QTVHARTKLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPAL 117
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEII--LREMESQPHIVLDWSTYASAAH 245
L+++ + PD+ IN++ + E M+I ++E +P STY +
Sbjct: 118 LSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTT----STYNTLIK 173
Query: 246 FYIKANLIDKASDVLKKAE-----ERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
+ ++ + + +K E E ++ D YN LI + + K ++ W++
Sbjct: 174 GF---GIVGRPYESMKLLEMMGQDENVKPNDRT-YNILIQAWCT---KKKLEEAWNVLHK 226
Query: 301 ACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
I D Y TM A + GE E+AE+++ + + + + R +I GYC G
Sbjct: 227 MVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGN 286
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP 417
+ A L + E G P + + GY DA T + AL++ +E G KPD
Sbjct: 287 MTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNG----VDEALTL-MEEFGIKPDV 341
Query: 418 KVITSILSKLGDEGSVQDVEA-FVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDS 474
++I++ G + + E F ++ I + Y K +R G + + LL S
Sbjct: 342 VTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTS 401
Query: 475 MKADGIDED 483
M G+ +
Sbjct: 402 MSKYGVQTN 410
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 128/274 (46%), Gaps = 16/274 (5%)
Query: 123 NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
N+K +++TY L+ + +++ ++A + KM GI +TYN + Y++ G+
Sbjct: 196 NVKPNDRTYNI---LIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGET 252
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEII--LREMESQPHIVLDWST 239
EK ++ +M+ + P+ + I I+ Y ++ E + + ++E+ P+ V+
Sbjct: 253 EKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVV---- 308
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG---NKSEVLRLWD 296
+ S Y+ A + + L EE + D + ++ +++ ++S G N E+ D
Sbjct: 309 FNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFN--D 366
Query: 297 LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
+ K + I+ Y + + ++ G+ +AE +L G + I +I G+C G
Sbjct: 367 MVKAGIEPDIHA-YSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAG 425
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+ A ++ E + E G + ++ + GY +A
Sbjct: 426 KMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEA 459
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 38/246 (15%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E+ TY LL+ + Q D A +M I + +TY+ ++ Y+K G+ ++ +
Sbjct: 209 EQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALN 268
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
+ EMK +I D SY + S YA F
Sbjct: 269 LFNEMKFASIGLDRVSYNTLL-----------------------------SIYAKLGRF- 298
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
++A +V K+ E +KD + YN L+ Y G EV R+++ E A + + N
Sbjct: 299 ------EEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFE-EMKAERIFPN 351
Query: 308 -RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y T+++ K G ++EA +V +E++ +G D + +A+I C NGLV++A + L+
Sbjct: 352 LLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLD 411
Query: 367 DLVEKG 372
++ ++G
Sbjct: 412 EMTKEG 417
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 135/320 (42%), Gaps = 51/320 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ Y + + D+AL+ F +MK I L ++YN ++ +Y+K G++E+ +V EM
Sbjct: 249 TYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEM 308
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ I D +Y + YG + E ++ + EM+++ I + TY++ Y K L
Sbjct: 309 ESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAE-RIFPNLLTYSTLIDVYSKGGL 367
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+A +V ++ + G K++V+ Y
Sbjct: 368 YQEAMEVFRE-------------------FKKAGLKADVVL----------------YSA 392
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++AL K G E A L E G + N++I + +G+V ED E
Sbjct: 393 LIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIV-------EDATESE 445
Query: 373 KATTPNSWAVVAAGYFDAGKT------ERGFQCMKAALSVYVEGKGWKPDPKVIT--SIL 424
++ + G A KT RG Q + L+V+ + P V+T +IL
Sbjct: 446 VGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAIL 505
Query: 425 SKLGDEGSVQDVEAFVAALR 444
+ S +D + LR
Sbjct: 506 NACSRCNSFEDASMLLEELR 525
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 132/317 (41%), Gaps = 57/317 (17%)
Query: 161 GIALSTLTYNDIMCLYSKTG-QYEKVPDVLTEMKA------KNIFPDNFSYRICINSYGA 213
G+ + +TYN ++ K G + + ++ EM + I D F+Y +++
Sbjct: 165 GLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCK 224
Query: 214 RSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGI 273
++ I+ EM + HI+ + TY++ Y KA +D+A ++ + + D +
Sbjct: 225 GGQMDLAFQIMSEMPRK-HIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRV 283
Query: 274 GYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEW 333
YN L+S+YA KLG EEA V KE
Sbjct: 284 SYNTLLSIYA-----------------------------------KLGRFEEALNVCKEM 308
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAG 391
E SG D NA++ GY G + + + E++ K + PN +++ + Y G
Sbjct: 309 ESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEM--KAERIFPNLLTYSTLIDVYSKGG 366
Query: 392 KTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIP 448
+ A+ V+ E K G K D + ++++ L G V+ +F+ + + I
Sbjct: 367 -------LYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIR 419
Query: 449 MNRQMYHAFIKANIRNG 465
N Y++ I A R+G
Sbjct: 420 PNVVTYNSIIDAFGRSG 436
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 146/343 (42%), Gaps = 12/343 (3%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ Y L+ + +D L+ F++M+E+G + + ++ ++K G+ + +L
Sbjct: 167 AFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLL 226
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EMK+ ++ D Y +CI+S+G ++ E+E+ + D TY S K
Sbjct: 227 DEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYTSMIGVLCK 285
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR- 308
AN +D+A ++ + E+ YN +I Y S G E L LE+ K I
Sbjct: 286 ANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL--LERQRAKGSIPSV 343
Query: 309 -DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y +L L K+G+ +EA KV +E + + + N +I C G + A + +
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ + G + ++ + K + A+ ++ K PD S++ L
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEA-----CAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 428 GDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD 469
G G V D + + L + N +Y + IK +G+ D
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/453 (20%), Positives = 184/453 (40%), Gaps = 45/453 (9%)
Query: 68 IIRDLRKRKRFSQALEVSDWM--NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYF---- 121
+I L K R +A+E+ + + NR+ PC +A ++G E+Y
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRR-----VPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
K + Y +L C + + D+AL F +MK+ A + TYN ++ + + G+
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGK 392
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
+ ++ M+ +FP+ + I ++ L+ + EM+ + D T+
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV-CTPDEITFC 451
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKT 300
S K +D A V +K + + + I Y LI + + G K + +++ D+
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 301 ACK---RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
C + +N T ++ + K GE E+ + +E + D R + +I G G
Sbjct: 512 NCSPDLQLLN----TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP 417
+ + E+G ++ +V G+ GK + +Q ++ ++ KG++P
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE-----MKTKGFEPTV 622
Query: 418 KVITSILSKLGDEGSVQDVEA-FVAALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLD 473
S++ L + + F A I +N +Y + I + G+ +DE +L+
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR-IDEAYLILE 681
Query: 474 SMKADGIDED--------------EETKEILVC 492
+ G+ + EE E LVC
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVC 714
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 106/276 (38%), Gaps = 36/276 (13%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
++Y L++ ++ ++ F MKE G L T YN ++ + K G+ K +L E
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
MK K P +Y I+ L+ ++ E +S+ I L+ Y+S + K
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK-RIELNVVIYSSLIDGFGKVG 671
Query: 252 LIDKAS----------------------DVLKKAEERLE-------------QKDGIGYN 276
ID+A D L KAEE E + + Y
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
LI+ + ++ W + + Y TM+ L K G EA + ++ +
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
G D+ NA+I G N +A ++ E+ +G
Sbjct: 792 GGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/405 (18%), Positives = 155/405 (38%), Gaps = 51/405 (12%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E T + L+ + ++ + D ALS +MK + + YN + + K G+ +
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWK 259
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
E++A + PD +Y I + L+ + +E + ++ Y + Y
Sbjct: 260 FFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA-YNTMIMGY 318
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYI 306
A D+A +L++ + I YN +++ +G E L+++ +++K A
Sbjct: 319 GSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNL- 377
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI----------------- 349
Y +++ L + G+ + A ++ + +G + R N ++
Sbjct: 378 -STYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 350 -----------IGYCN-------NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
I +C+ G V +A + E +++ T + + +F+ G
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPM 449
+ E G + K ++ + PD +++ + + + G + A + R +P
Sbjct: 497 RKEDGHKIYKDMIN-----QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551
Query: 450 NRQ---MYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
R + H IKA N EL SMK G D I++
Sbjct: 552 ARSYSILIHGLIKAGFAN--ETYELFYSMKEQGCVLDTRAYNIVI 594
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/400 (18%), Positives = 160/400 (40%), Gaps = 40/400 (10%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +L++ + + D A + KM + +++ Y ++ + G+ E + +M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+N PD ++ + E + E++++ V D +Y+ H IKA
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR-RFVPDARSYSILIHGLIKAGF 567
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
++ ++ +E+ D YN +I + G ++ +L + KT Y +
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ L K+ +EA + +E + + I +++I G+ G + A ILE+L++KG
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 373 KATTPN--SWAVVAAGYFDAGKTERGFQCMKA-----------ALSVYVEG--------- 410
TPN +W + A + C ++ + + G
Sbjct: 688 --LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNK 745
Query: 411 ----------KGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT--VIPMNRQMYHAFI 458
+G KP T+++S L G++ + A + +P + Y+A I
Sbjct: 746 AFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP-DSACYNAMI 804
Query: 459 KANIRNGKGVD--ELLDSMKADGIDEDEETKEILVCTMEK 496
+ + +D L + + G+ +T +L+ T+ K
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHK 844
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 154/396 (38%), Gaps = 55/396 (13%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM-CLYSKTGQYEKVPDV 188
T TY L++C R R+ D L F + G+ + +T + ++ CL E V +
Sbjct: 156 TVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVL 215
Query: 189 LTEMKAKNIFPDNFSYRI-----CINSYGARSDLEGMEIILREMES-QPHIVL------- 235
L M P+ FSY I C NS R+ L+ +++ +E + P++V
Sbjct: 216 LHRMSELGCVPNVFSYSIILKGLCDNSMSQRA-LDLFQMMAKEGGACSPNVVAYNTVIHG 274
Query: 236 ------------------------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
D TY KA +DKA VL++ Q D
Sbjct: 275 FFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPD 334
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI--TMLEALMKLGEHEEAEKV 329
+ YN +I YA+LG E +++ K + I I + L +L K G +EA ++
Sbjct: 335 TVTYNCMIHGYATLGRLKEAAKMF--RKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEI 392
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
G+ D ++ GY + G + + + G A + ++ Y
Sbjct: 393 FDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAK 452
Query: 390 AGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTV 446
G + A+ ++ E +G PD ++++S G + D +E F +
Sbjct: 453 RGMVDD-------AMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG 505
Query: 447 IPMNRQMYHAFIKANIRNGKGV--DELLDSMKADGI 480
I N +YH+ I+ +G V EL+ M GI
Sbjct: 506 IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGI 541
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 130/307 (42%), Gaps = 11/307 (3%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ + ++ +T KA S F +M G+ +TYN I+ K +K VL +M
Sbjct: 268 YNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMT 327
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKA 250
PD +Y I+ Y L+ + R+M+S+ P+IV+ S AS K
Sbjct: 328 TNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLC----KH 383
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+A+++ + + D + Y L+ YAS G ++++ L++ K+ R +
Sbjct: 384 GRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVF 443
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++ A K G ++A + E + G S D + VI + G + +A +V
Sbjct: 444 NILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVA 503
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+G + + G+ G G K +S + +PD S+++ L +
Sbjct: 504 RGIQPNTAVYHSIIQGFCMHG----GLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKD 559
Query: 431 GSVQDVE 437
G V D
Sbjct: 560 GRVMDAH 566
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 142/338 (42%), Gaps = 8/338 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ Y + +A FRKMK G+ + + N + K G+ ++ ++ M
Sbjct: 337 TYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSM 396
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
AK PD SY ++ Y + M + M+S I D + H Y K +
Sbjct: 397 TAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSN-GIAADCRVFNILIHAYAKRGM 455
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+D A + + +++ D + Y+ +IS ++ +G ++ + ++ + Y +
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHS 515
Query: 313 MLEALMKLGEHEEAEKVLKEWELSG-NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+++ G +A++++ E G D N+VI C +G V +A I + + +
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDI 575
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G+ ++ + GY GK ++ F+ + A +E G + D +++L G
Sbjct: 576 GERPDVITFTSLIDGYCLVGKMDKAFKILDA-----MEVVGVETDIVTYSTLLDGYFKNG 630
Query: 432 SVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGV 468
+ D + F R + N Y + R G+ V
Sbjct: 631 RINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTV 668
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 158/402 (39%), Gaps = 56/402 (13%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ------YEKV 185
Y +L++ Y R ++ALS RKMKE G+ +S +TY+ ++ ++K G ++
Sbjct: 338 HVYTSLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRA 397
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII---LREMESQPHIVLDWSTYAS 242
++ EM+ + I Y +N Y + E I+ L+E P ++ +Y
Sbjct: 398 ESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVI----SYGC 453
Query: 243 AAHFYIKANLIDKASDVLKKAEE------------------RLEQ------------KDG 272
+ Y K + KA +V K E +L+ KDG
Sbjct: 454 LINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDG 513
Query: 273 IG-----YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAE 327
+ YN +I + +GN + + + R +R ++ ++ + GE A
Sbjct: 514 LKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRAL 573
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
++ SG NA+++G ++ A IL+++ G + +++ + GY
Sbjct: 574 EIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGY 633
Query: 388 FDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV- 446
G T + F+ + +G + D ++L G +Q A +
Sbjct: 634 AALGDTGKAFEYF-----TKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQN 688
Query: 447 IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEET 486
IP N +Y+ I R G +L+ MK +G+ D T
Sbjct: 689 IPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHT 730
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 14/266 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGF-------LSAESY 120
II + +ALE+ D M R G C+ P H ++G V + E
Sbjct: 559 IIHGFARAGEMRRALEIFDMMRRSG-CI--PTVHTFNALVLGLVEKRQMEKAVEILDEMA 615
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+ + DE TY T ++N Y T KA +F K++ G+ L TY ++ K+G
Sbjct: 616 LAGVSPDEHTYTT---IMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSG 672
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ + V EM A+NI + F Y I I+ + R D+ ++++M+ Q + D TY
Sbjct: 673 RMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMK-QEGVQPDIHTY 731
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
S + KA + +A+ +++ E + + Y LI +A + LR ++ K
Sbjct: 732 TSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKL 791
Query: 301 ACKRYINRDYITMLEALMKLGEHEEA 326
A + Y ++ +L+ EA
Sbjct: 792 AGLKPDKAVYHCLMTSLLSRATVAEA 817
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 113/277 (40%), Gaps = 11/277 (3%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K T +T+ +++ + R + +AL F M+ G + T+N ++ + Q EK
Sbjct: 547 KRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEK 606
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
++L EM + PD +Y +N Y A D ++ ++ + LD TY +
Sbjct: 607 AVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNE-GLELDVFTYEALL 665
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K+ + A V ++ + ++ YN LI +A G+ E L K +
Sbjct: 666 KACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQ 725
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y + + A K G+ A K ++E E G + + +I G+ L + A
Sbjct: 726 PDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRC 785
Query: 365 LEDLVEKG----KA------TTPNSWAVVAAGYFDAG 391
E++ G KA T+ S A VA Y +G
Sbjct: 786 FEEMKLAGLKPDKAVYHCLMTSLLSRATVAEAYIYSG 822
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 152/390 (38%), Gaps = 52/390 (13%)
Query: 105 LDLIGRVHGFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+D G+ + AES + L + T TY LL Y +KA + F +M++ G
Sbjct: 213 IDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGF 272
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
S + YN + K G +K ++ MK P +Y + IN YG S
Sbjct: 273 PPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALK 332
Query: 223 ILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+ EM SQ P+I T+ + + + + L +KA ++ ++ +E + D YN L+
Sbjct: 333 VFHEMRSQKCKPNIC----TFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALM 388
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
Y+ G ++ L + Y M++A + G HE
Sbjct: 389 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE--------------- 433
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC 399
+A+A+ E + G T S ++ + Y AGK + +
Sbjct: 434 --------------------DAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEI 473
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFI 458
+ + G KPD V+ S+L+ G G + +E + A+ + P + Y+ I
Sbjct: 474 VNQ-----MHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILI 528
Query: 459 KANIRNG--KGVDELLDSMKADGIDEDEET 486
R G ++EL S+ A + D T
Sbjct: 529 NIYGRAGFFARMEELFRSLPARNLIPDVVT 558
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +++ Y R + A + F MK +GI + ++ ++ YS+ G+ K +++ +M
Sbjct: 418 SYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQM 477
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
I PD F +N YG E ME +L ME P+ D STY + Y +A
Sbjct: 478 HKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPA-DISTYNILINIYGRAGF 536
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
+ ++ + R D + + I Y+ + L +++
Sbjct: 537 FARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFE 580
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 81 ALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK--DDEKTYQTYGALL 138
A E+ M G C + + +D GR A++ F +K T +++ LL
Sbjct: 400 AAEIFSLMQHMG-CEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLL 458
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
+ Y R + K +M + GI T N ++ LY + GQ+EK+ +VLT M+ K +
Sbjct: 459 SAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAME-KGPY 517
Query: 199 PDNFS-YRICINSYGARSDLEGMEIILREMESQPHI--VLDWSTYASA 243
P + S Y I IN YG ME + R + ++ I V+ W++ A
Sbjct: 518 PADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGA 565
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/377 (18%), Positives = 137/377 (36%), Gaps = 44/377 (11%)
Query: 69 IRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE 128
I L K +A+E+ + M R C + + + ++L G+ A F ++ +
Sbjct: 283 IDGLMKGGDTQKAVEIFERMKRDR-CQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK 341
Query: 129 --KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
T+ AL+N + R+ +KA F +++E G+ YN +M YS+ G
Sbjct: 342 CKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAA 401
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
++ + M+ PD SY I +++YG R+ L + E+ + I ++
Sbjct: 402 EIFSLMQHMGCEPDRASYNIMVDAYG-RAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSA 460
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y +A + K +++ + + + D N +++LY
Sbjct: 461 YSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYG----------------------- 497
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+LG+ E+ E+VL E D N +I Y G E +
Sbjct: 498 ------------RLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFR 545
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
L + +W Y + R + + + G PD +LS
Sbjct: 546 SLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDA-----GCYPDGGTAKVLLSA 600
Query: 427 LGDEGSVQDVEAFVAAL 443
+ +Q+V + +
Sbjct: 601 CSNGDQIQEVTTVIRTM 617
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 109/288 (37%), Gaps = 9/288 (3%)
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
PD Y + I++YG +S + E E+ + V TYA Y + L++KA
Sbjct: 204 PDVICYNLLIDAYGQKSLYKKAESTYLEL-LEARCVPTEDTYALLLKAYCTSGLLEKAEA 262
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALM 318
V + + + YN I G+ + + +++ K + Y ++
Sbjct: 263 VFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYG 322
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
K + A KV E + A++ + GL + AE I E L E G
Sbjct: 323 KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVY 382
Query: 379 SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA 438
++ + Y A GF A + ++ G +PD ++ G G +D +A
Sbjct: 383 AYNALMEAYSRA-----GFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQA 437
Query: 439 -FVAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
F R I + + + A R GK +E+++ M GI D
Sbjct: 438 VFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPD 485
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 129/310 (41%), Gaps = 13/310 (4%)
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+ + AL +V A S M + G ++ N ++ + ++GQ +K + +
Sbjct: 77 FTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFS 136
Query: 191 EMKAK--NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
+MK + PD +Y +N + L ++ M+ + TY+ Y
Sbjct: 137 QMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYC 196
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K+ + + +L++ E + D Y+ LIS + G+ L+D +R ++
Sbjct: 197 KSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFD---EMLRRKVSP 253
Query: 309 DYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
+ +T +++ L + G EA ++LK+ G D + G C NG +A +L
Sbjct: 254 NVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVL 313
Query: 366 EDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+ +V+KG+ ++ VV G + + F ++ + KG KPD ++L
Sbjct: 314 DLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVK-----KGKKPDAVTYNTLLK 368
Query: 426 KLGDEGSVQD 435
L G + +
Sbjct: 369 GLCGAGKIHE 378
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 134/349 (38%), Gaps = 57/349 (16%)
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
KG C CD A+ L F + + + D TY T L+N + + ++ +A
Sbjct: 120 KGFCRSGQCDKAMSL--------FSQMKRNYDCVVPDCVTYNT---LVNGFCKAKRLAEA 168
Query: 151 LSHFRKMKEMGIALSTL-TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
F MK+ G L TY+ ++ Y K+G+ + +L EM+ + + D F Y I+
Sbjct: 169 RVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLIS 228
Query: 210 SYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
++ D+E + EM + P++V TY+ + +AS++LK R
Sbjct: 229 AFCGEGDIETGRELFDEMLRRKVSPNVV----TYSCLMQGLGRTGRWREASEMLKDMTAR 284
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEA 326
+ D + Y L + L K G +A
Sbjct: 285 GVRPDVVAYTVLA-----------------------------------DGLCKNGRAGDA 309
Query: 327 EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG 386
KVL G T N V+ G C + +A ++E +V+KGK ++ + G
Sbjct: 310 IKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKG 369
Query: 387 YFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
AGK K LS E KPD +++ L EG V D
Sbjct: 370 LCGAGKIHEAMDLWKLLLS---EKFHVKPDVFTCNNLIQGLCKEGRVHD 415
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 154/422 (36%), Gaps = 37/422 (8%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
L K G V V L +++ + + +A+ + M R CV C L
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTL---- 155
Query: 110 RVHGFLSAESY------FSNLK---DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEM 160
V+GF A+ F +K D TY L++CY + + + L +M+
Sbjct: 156 -VNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMERE 214
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGM 220
G+ Y+ ++ + G E ++ EM + + P+ +Y + G
Sbjct: 215 GLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREA 274
Query: 221 EIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
+L++M ++ + D Y A K A VL ++ E+ + YN +++
Sbjct: 275 SEMLKDMTAR-GVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVN 333
Query: 281 LYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
+ + ++ K+ Y T+L+ L G+ EA + W+L +
Sbjct: 334 GLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEA---MDLWKLLLSEK 390
Query: 341 -----DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK--- 392
D N +I G C G V +A I +VE G ++ + GY A K
Sbjct: 391 FHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIE 450
Query: 393 --------TERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG---SVQDVEAFVA 441
E GF SV + G V + K+ D G +V D A +
Sbjct: 451 ALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMT 510
Query: 442 AL 443
+L
Sbjct: 511 SL 512
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 91/203 (44%), Gaps = 5/203 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++N + + A F KMK+ GI + + YN +M + E+ + EM
Sbjct: 469 TYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEM 528
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ N D S+ I I+ D++ + +L EM +V D T++ + + K +
Sbjct: 529 RNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMM-DLVPDAVTFSILINRFSKLGM 587
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI--NRDY 310
+D+A + +K + ++ L+ Y G +++ L L + A K + ++
Sbjct: 588 LDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISL--LHQMADKDVVLDSKLT 645
Query: 311 ITMLEALMKLGEHEEAEKVLKEW 333
T+L L + + + EK+L ++
Sbjct: 646 STILACLCHMSRNLDVEKILPKF 668
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Query: 96 FAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKAL 151
F+P ++V ++ + ++ A F +KD T Y AL+ R+ ++A
Sbjct: 463 FSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQAR 522
Query: 152 SHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
S F++M+ + + +++N I+ K G + ++L+EM ++ PD ++ I IN +
Sbjct: 523 SLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRF 582
Query: 212 GARSDLEGMEIILREMESQPHI 233
L+ + +M S H+
Sbjct: 583 SKLGMLDEAMGLYEKMVSCGHV 604
>gi|225438599|ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Vitis vinifera]
gi|296082481|emb|CBI21486.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 45/260 (17%)
Query: 113 GFLSAESYFSNLKDDEKTYQ---TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
+ A YF +K E+ TY LL + + + ++A + F+++ E ++ T+
Sbjct: 188 ALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTF 247
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM-- 227
N +M Y K G +++ VL+ MK+ PD ++ + I+SYG R + + ME + + +
Sbjct: 248 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLR 307
Query: 228 -ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
+ +P + T+ S Y KA L +KA +V KK + + I Y LI +Y
Sbjct: 308 SKEKPTL----PTFNSMITNYGKARLKEKAENVFKKMTDMGYAPNFITYESLIMMYGFCD 363
Query: 287 NKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN 346
S ++D E ++K +K L N
Sbjct: 364 CISRAREIFD-------------------------EMMASKKEMKVSTL----------N 388
Query: 347 AVIIGYCNNGLVQNAEAILE 366
A++ YC NGL A+ +LE
Sbjct: 389 AMLEVYCMNGLPMEADLLLE 408
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 154/366 (42%), Gaps = 19/366 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
YG ++N ++ T KA R M++ +T TY ++ + K G + +L EMK
Sbjct: 181 YGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMK 240
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
K+I PD F+Y I++ S E + + EM +I + T+ S K +
Sbjct: 241 QKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEM-IHLNIYPNVCTFNSVIDGLCKEGKV 299
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT- 312
+ A ++++ E+ D I YN +I Y G + +V R ++ + + I D I+
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGY---GLRGQVDRAREIFDSMINKSIEPDIISY 356
Query: 313 --MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++ + + +EA +V +E G N ++ G G ++A+ ++++
Sbjct: 357 NILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLS 416
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSILSKLG 428
G + + GYF G E A+S + +E + + ++ T+++ L
Sbjct: 417 AGHIPDLYTHCTLLGGYFKNGLVEE-------AMSHFHKLERRREDTNIQIYTAVIDGLC 469
Query: 429 DEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEE 485
G + A L + + + Y A I + G ++L M+ +G D
Sbjct: 470 KNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNR 529
Query: 486 TKEILV 491
T ++V
Sbjct: 530 TYNVIV 535
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 154/366 (42%), Gaps = 15/366 (4%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY +++ + + D A S +MK+ I TY+ ++ K Q+E V + E
Sbjct: 214 RTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLE 273
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M NI+P+ ++ I+ +E E I+R M + + D TY Y
Sbjct: 274 MIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYM-IEKGVDPDVITYNMIIDGYGLRG 332
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDY 310
+D+A ++ + + D I YN LI+ YA E +++ ++ + K I
Sbjct: 333 QVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCN 392
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+ +L L +LG + A+ E +G+ D ++ GY NGLV+ A + L
Sbjct: 393 V-LLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLER 451
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+ + T + V G GK ++ + + G PD T+++S E
Sbjct: 452 RREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLI-----GLHPDVITYTAMISGYCQE 506
Query: 431 GSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNGKGVDEL---LDSMKADGIDEDEE 485
G + + + + + + NR Y+ ++ +R+ K V E+ L+ + +
Sbjct: 507 GLLDEAKDMLRKMEDNGCLADNRT-YNVIVRGFLRSNK-VSEMKAFLEEIAGKSFSFEAA 564
Query: 486 TKEILV 491
T E+L+
Sbjct: 565 TVELLM 570
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 117 AESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A S+F L + ++ Q Y A+++ + + DKA + F K+ +G+ +TY ++
Sbjct: 442 AMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMIS 501
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
Y + G ++ D+L +M+ DN +Y + + + + + M+ L E+ +
Sbjct: 502 GYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGK 557
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 96/247 (38%), Gaps = 36/247 (14%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K E +Y L+N Y RQ++ D+A+ R++ + G+ S +T N ++ + G+ +
Sbjct: 347 KSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKS 406
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
+ EM + PD +++ + Y +E ++E + + Y +
Sbjct: 407 AQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDT-NIQIYTAVI 465
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K +DKA +K D I Y +IS Y
Sbjct: 466 DGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQ-------------------- 505
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
E L+ +EA+ +L++ E +G D R N ++ G+ + V +A
Sbjct: 506 ----------EGLL-----DEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAF 550
Query: 365 LEDLVEK 371
LE++ K
Sbjct: 551 LEEIAGK 557
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 132/297 (44%), Gaps = 9/297 (3%)
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
+ DKA+ +M+ + I + +TYN ++ Y + E +++ EM K PD SY
Sbjct: 282 RLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYY 341
Query: 206 ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
+ ++ + +++ +M +++ D TY + H K D+A + L++AEE
Sbjct: 342 TVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEE 401
Query: 266 RLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDYITMLEALMKLGEH 323
R + D +GY+ ++ + G + + + K + Y +++ L + +
Sbjct: 402 RRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVT--YTSVINGLCQERKV 459
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
++A+K+L++ G +T A++ G C NG A ++ E +++V+
Sbjct: 460 DQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVL 519
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
G+ GK+ ++ + KG+ P P I ++ L E V + + F+
Sbjct: 520 MHGFRREGKSSEACDLVREMIK-----KGFFPTPVEINLLIQSLCQEEKVDEAKRFM 571
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 142/321 (44%), Gaps = 21/321 (6%)
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
SNL D+ TY T+ +L+ + D+AL R+ +E + + Y+ I+ + + G+
Sbjct: 367 SNLLPDQVTYNTFVHMLS---KHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 423
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWS 238
+K +++ EM +K PD +Y IN ++ + +LR+M +P+ V
Sbjct: 424 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTV---- 479
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
+Y + + K +A +++ +EE + I Y+ L+ + G SE DL
Sbjct: 480 SYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEA---CDLV 536
Query: 299 KTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
+ K+ + ++++L + + +EA++ +++ +G + + VI G+C
Sbjct: 537 REMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQK 596
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
++ A ++L+D+ K ++ + G+ E + L V G P
Sbjct: 597 DDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV-----GLIP 651
Query: 416 DPKVITSILSKLGDEGSVQDV 436
P +++ + G V+D+
Sbjct: 652 TPVTYRTVIHQYCRMGRVEDL 672
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 111/274 (40%), Gaps = 31/274 (11%)
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC-----INSYGARSD-----LEGME 221
+M YS+ G+ VLT M+ I PD IC + G R D LE M+
Sbjct: 238 VMVSYSRAGKLRNAMRVLTMMQKAGIEPD---LSICNTAIHVLVMGNRLDKAVRFLERMQ 294
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
I+ E +P+++ TY Y + ++ A +++ + + D I Y ++
Sbjct: 295 IV----EIEPNVI----TYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGF 346
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGN 338
EV L +EK + D Y T + L K G +EA + L+E E
Sbjct: 347 LCKEKRIKEVRLL--MEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRF 404
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
D +A++ +C G + A+ I+ ++ KG ++ V G K + Q
Sbjct: 405 RVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVD---Q 461
Query: 399 CMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
K +Y G KP+ T++L+ L G+
Sbjct: 462 AKKMLRQMY--KHGCKPNTVSYTALLNGLCKNGN 493
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 23/235 (9%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ + R+ ++ +A R+M + G + + N L Q EKV + M
Sbjct: 515 TYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEIN---LLIQSLCQEEKVDEAKRFM 571
Query: 193 K-------AKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYAS 242
+ A N+ NF+ I+ + + DLE +L +M P +V TY +
Sbjct: 572 EQCLNNGCAVNVV--NFT--TVIHGFCQKDDLEAALSLLDDMYLSNKHPDVV----TYTT 623
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
K I++A+ + K + Y +I Y +G ++L+L LEK
Sbjct: 624 IIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKL--LEKMLS 681
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
++ Y ++E L G E+A K+L + + + D + +I Y + G+
Sbjct: 682 RQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGI 736
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 178/452 (39%), Gaps = 67/452 (14%)
Query: 32 LYSIISPL----------GNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQA 81
++ ++SP+ G +I LDN N +L + R K++
Sbjct: 244 VFPVLSPMAQDILEFVQKGTDVAKIWESLDNIPSTHN--LFDDLVNVAVQFRMNKKWDLI 301
Query: 82 LEVSDWMNRKGICVFAP---CDHAVQLDLIGRVHGFLSAESYFSNLKDDE--KTYQTYGA 136
+ V +W+ + F P C + + ++ G+ AES + L + + T TY
Sbjct: 302 IPVCEWILYRS--SFRPDIIC-YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYAL 358
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL Y +A +M+E GI + YN + K EK +V MK +
Sbjct: 359 LLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRER 418
Query: 197 IFPDNFSYRICINSYG-ARSDLEGMEII--LREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ ++ + IN YG A+ + M++ ++ + +P+I TY + + + + L
Sbjct: 419 CRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNIC----TYTALVNAFAREGLC 474
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
+KA +V ++ ++ + D YN +
Sbjct: 475 EKAEEVFEEMQQAGHEPDVYAYN-----------------------------------AL 499
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
+EA + G + A ++ + G D N ++ Y GL ++AEA+ E+L ++G
Sbjct: 500 MEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGM 559
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
+ T S ++ A + +G R + M + G PD + ++L+ G +
Sbjct: 560 SPTMKSHMLLLAAHARSGNATRCEEVMAQ-----LHKSGLTPDTFALNAMLNAYARAGRL 614
Query: 434 QDVEAFVAALRTVIPMNRQMYHAFIKANIRNG 465
D+E +AA+ + Y+ + A R G
Sbjct: 615 DDMERLLAAMERRGDADVGTYNVAVNAYGRAG 646
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 112/263 (42%), Gaps = 2/263 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y A L+ ++ R T+KA+ +++MK +T T+ ++ +Y K Q V EM
Sbjct: 390 VYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEM 449
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K+ P+ +Y +N++ E E + EM+ H D Y + Y +A L
Sbjct: 450 KSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGL 508
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
AS++ + + D YN L+ Y G + +++ K + ++
Sbjct: 509 PQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHML 568
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+L A + G E+V+ + SG + DT NA++ Y G + + E +L + +G
Sbjct: 569 LLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAAMERRG 628
Query: 373 KATTPNSWAVVAAGYFDAGKTER 395
A ++ V Y AG R
Sbjct: 629 DADV-GTYNVAVNAYGRAGYVGR 650
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 173/438 (39%), Gaps = 32/438 (7%)
Query: 62 VGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYF 121
+ + R++ + K K++ + + + M GI C + L+ R A S+
Sbjct: 81 IADFSRLLSAISKMKKYDVVIYLWEQMQMLGI-PHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 122 SNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
+ E + T+G+LLN + R + AL F +M MG + + YN I+ K+
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICIN---SYGARSDLEGMEIILREMESQPHIVLD 236
Q + D+L M+ I PD +Y I+ S G SD M + + E P D
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP----D 255
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI---SLYASLGNKSEVLR 293
T+ + +K + +A + ++ R D + Y+ LI +Y+ L E+
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
+ K + Y ++ K + E K+ E G +T +I GYC
Sbjct: 316 FM-VSKGCFPDVVT--YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
G + AE I +V G ++ V+ G D GK E+ AL + + +
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK-------ALVILADMQKN 425
Query: 414 KPDPKVITS--ILSKLGDEGSVQDVEAFVAAL--RTVIP---MNRQMYHAFIKANIRNGK 466
D ++T I+ + G V D +L + ++P M K +R +
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR--R 483
Query: 467 GVDELLDSMKADGIDEDE 484
D L MK DGI +E
Sbjct: 484 EADALFRKMKEDGILPNE 501
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 113/288 (39%), Gaps = 54/288 (18%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
+D VK G RV E + ++ +R + S + G+C+++ D A ++
Sbjct: 263 IDACVKEG---RVSEAEEFYEEMIRRSLDPDIVTYSLLI--YGLCMYSRLDEAEEM---- 313
Query: 110 RVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
GF+ ++ F ++ TY L+N Y + ++ + + F +M + G+ +T+TY
Sbjct: 314 --FGFMVSKGCFPDV-------VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
++ Y + G+ ++ M + P+ +Y + ++ +E +IL +M+
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Query: 230 QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS 289
+ D TY KA + A D+ Y SL +
Sbjct: 425 NG-MDADIVTYNIIIRGMCKAGEVADAWDI----------------------YCSLNCQG 461
Query: 290 EVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
+ +W Y TM+ L K G EA+ + ++ + G
Sbjct: 462 LMPDIW-------------TYTTMMLGLYKKGLRREADALFRKMKEDG 496
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 151/387 (39%), Gaps = 52/387 (13%)
Query: 105 LDLIGRVHGFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+D G+ + AES + L + T TY LL Y +KA + F +M++ G
Sbjct: 175 IDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGF 234
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
S + YN + K G +K ++ MK P +Y + IN YG S
Sbjct: 235 PPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALK 294
Query: 223 ILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+ EM SQ P+I T+ + + + + L +KA ++ ++ +E + D YN L+
Sbjct: 295 VFHEMRSQKCKPNIC----TFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALM 350
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNS 339
Y+ G ++ L + Y M++A + G HE
Sbjct: 351 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE--------------- 395
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC 399
+A+A+ E + G T S ++ + Y AGK + +
Sbjct: 396 --------------------DAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEI 435
Query: 400 MKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFI 458
+ + G KPD V+ S+L+ G G + +E + A+ + P + Y+ I
Sbjct: 436 VNQ-----MHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILI 490
Query: 459 KANIRNG--KGVDELLDSMKADGIDED 483
R G ++EL S+ A + D
Sbjct: 491 NIYGRAGFFARMEELFRSLPARNLIPD 517
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +++ Y R + A + F MK +GI + ++ ++ YS+ G+ K +++ +M
Sbjct: 380 SYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQM 439
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
I PD F +N YG E ME +L ME P+ D STY + Y +A
Sbjct: 440 HKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPA-DISTYNILINIYGRAGF 498
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
+ ++ + R D + + I Y+ + L +++
Sbjct: 499 FARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFE 542
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 81 ALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK--DDEKTYQTYGALL 138
A E+ M G C + + +D GR A++ F +K T +++ LL
Sbjct: 362 AAEIFSLMQHMG-CEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLL 420
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
+ Y R + K +M + GI T N ++ LY + GQ+EK+ +VLT M+ K +
Sbjct: 421 SAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAME-KGPY 479
Query: 199 PDNFS-YRICINSYGARSDLEGMEIILREMESQPHI--VLDWSTYASA 243
P + S Y I IN YG ME + R + ++ I V+ W++ A
Sbjct: 480 PADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGA 527
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/377 (18%), Positives = 137/377 (36%), Gaps = 44/377 (11%)
Query: 69 IRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE 128
I L K +A+E+ + M R C + + + ++L G+ A F ++ +
Sbjct: 245 IDGLMKGGDTQKAVEIFERMKRDR-CQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK 303
Query: 129 --KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
T+ AL+N + R+ +KA F +++E G+ YN +M YS+ G
Sbjct: 304 CKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAA 363
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
++ + M+ PD SY I +++YG R+ L + E+ + I ++
Sbjct: 364 EIFSLMQHMGCEPDRASYNIMVDAYG-RAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSA 422
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y +A + K +++ + + + D N +++LY
Sbjct: 423 YSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYG----------------------- 459
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+LG+ E+ E+VL E D N +I Y G E +
Sbjct: 460 ------------RLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFR 507
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
L + +W Y + R + + + G PD +LS
Sbjct: 508 SLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDA-----GCYPDGGTAKVLLSA 562
Query: 427 LGDEGSVQDVEAFVAAL 443
+ +Q+V + +
Sbjct: 563 CSNGDQIQEVTTVIRTM 579
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 109/288 (37%), Gaps = 9/288 (3%)
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
PD Y + I++YG +S + E E+ + V TYA Y + L++KA
Sbjct: 166 PDVICYNLLIDAYGQKSLYKKAESTYLEL-LEARCVPTEDTYALLLKAYCTSGLLEKAEA 224
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALM 318
V + + + YN I G+ + + +++ K + Y ++
Sbjct: 225 VFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYG 284
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
K + A KV E + A++ + GL + AE I E L E G
Sbjct: 285 KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVY 344
Query: 379 SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA 438
++ + Y A GF A + ++ G +PD ++ G G +D +A
Sbjct: 345 AYNALMEAYSRA-----GFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQA 399
Query: 439 -FVAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
F R I + + + A R GK +E+++ M GI D
Sbjct: 400 VFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPD 447
>gi|168005568|ref|XP_001755482.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693189|gb|EDQ79542.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 107/512 (20%), Positives = 206/512 (40%), Gaps = 49/512 (9%)
Query: 16 AVFSRFYYTNRINKTTLYSIISPLGNPG-TRIEPELDNWVKNGNKVR--VGELQRIIRDL 72
AVF N+++ T S S LG G +R + N + ++VR V I+ +
Sbjct: 209 AVFEYMKENNKLSPPTYTSYFSVLGKSGQSRKAIRVFNELPLDSEVRKNVFVCNSILSTM 268
Query: 73 RKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQ 132
+ +A + + + ++G+ V G+ A + ++K T
Sbjct: 269 IYNGKIDKAFRLFEQLKKEGLQPDTVTYSTVIAGCAKTRDGYSKALALIEDIKASGLTQD 328
Query: 133 T--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
YGA++N Q +A + F++M + G + Y+ ++ Y+ G+Y++ VL
Sbjct: 329 AVIYGAMMNVCASQGLDREAQATFQEMCDAGFTPNLFHYSSLLNAYASRGKYQQAERVLE 388
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
++A + P+ Y +N+Y + +E++ + D ++ S Y K
Sbjct: 389 AIRAAGLTPNLVVYNSLMNAYANCQMPSKAREVFDRIEAE-GLQRDMVSFCSMMDAYAK- 446
Query: 251 NLIDKASDVLKKAEERLEQK---------------------------DGIGYNFLISLYA 283
SD+LK+A+E + +GY+ LIS YA
Sbjct: 447 ------SDMLKEAQETFDSMIAQGMKPVYMLMQLLDLSGSLCSYGWWGSVGYSILISAYA 500
Query: 284 SLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
LG VL+L D +EK + T+L+ G + VLK+ + G D
Sbjct: 501 KLGEMDGVLKLVDQIEKGQNGECDILLFNTLLKVYCNAGYMDGVTAVLKKMDAEGCGSDR 560
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA 402
N +I + L A LED+ +G ++ + GY GK E F+ ++A
Sbjct: 561 GTFNILIGYFAKEDLGDLALKTLEDMETRGHRPNEATYNALFQGYVKNGKMEEMFEALEA 620
Query: 403 ALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKAN 461
++ +G P + +I+ + + V A+ L+ T I ++ + ++A
Sbjct: 621 -----MKQRGITPTNLSLQTIMLGCIEHNRIDVVLAYFPYLKATGIALSYSVMERLVEAL 675
Query: 462 IRNGKG--VDELLDSMKADGIDEDEETKEILV 491
+ G+ V + L M+ G ++T ++++
Sbjct: 676 VETGQMDVVKDALHLMQTTGQQPSQKTWDLVL 707
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 169/432 (39%), Gaps = 45/432 (10%)
Query: 7 LSTNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQ 66
L N HN + F TN++ + E L+ + N V
Sbjct: 377 LKPNAVTHNTLLQGFCRTNQMEQA----------------EQVLEYLLSNVLSVNEDACS 420
Query: 67 RIIRDLRKRKRFSQALE-----------VSDWMNRKGICVFAPC-DHAVQLDLIGRVHGF 114
++ L K +F AL+ V+D + +C C H +DL R+
Sbjct: 421 YVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRL--- 477
Query: 115 LSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
++ K T ALL + ++ ++M E G+ L ++YN ++
Sbjct: 478 -------ADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIF 530
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
K+G+ E+ + +M + PD ++Y + + ++ + +L E + +V
Sbjct: 531 GCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHG-VV 589
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
+ TYA Y A+ ID A + K + + YN LI+ ++ GN +E +L
Sbjct: 590 PNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKL 649
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
D +++ Y +++ + EEA+ + +E G + A+I GYC
Sbjct: 650 RDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCK 709
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
G + E+IL+++ ++ ++ GY G T+ + + ++ G
Sbjct: 710 LGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIA-----NGIS 764
Query: 415 PDPKVITSILSK 426
PD V ++L K
Sbjct: 765 PD-TVTYTVLQK 775
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 145/346 (41%), Gaps = 54/346 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG------------ 180
TY +N Y + + D+A+ F KM E G+ + +TYN+++ K+G
Sbjct: 243 TYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRM 302
Query: 181 -----------------------QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL 217
++++ VL EM +K P+ F + I+ Y + ++
Sbjct: 303 VENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNM 362
Query: 218 EGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
+ + +M + P+ V T+ + + + N +++A VL+ + +
Sbjct: 363 DDALRVRDDMTLKGLKPNAV----THNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDA 418
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYI--NRDYITMLEA-LMKLGEHEEAEKV-L 330
++++ L L++ K R I N +T+L L K G+H EA +
Sbjct: 419 CSYVLHLLCKSSKFDSALKIV---KALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWF 475
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+ + G + +T NA++ G C G ++ + +++VE+G S+ + G +
Sbjct: 476 RLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKS 535
Query: 391 GKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV 436
GK E F+ + + +G+KPD ++ L D+G + DV
Sbjct: 536 GKIEEAFKLKEKMMK-----QGFKPDTYTYNFLMKGLADKGKMDDV 576
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 85/221 (38%), Gaps = 36/221 (16%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L Y + D A+S F K+ + LS + YN ++ +SK G + + + M
Sbjct: 594 TYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAM 653
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ NI P F TY+S H +L
Sbjct: 654 RSSNIHPTIF------------------------------------TYSSIIHGMCCNDL 677
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+++A + ++ + Y LI Y LG ++ + + C + Y
Sbjct: 678 VEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTI 737
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
M++ K+G +EA K+L E +G S DT + GYC
Sbjct: 738 MIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYC 778
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 7/222 (3%)
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
D +K +FP S ++S ++L + M + +++D TYA+A +
Sbjct: 192 DTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAM-CRGGVLIDVYTYATAINA 250
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y K ID+A + K E + + YN LI G E L + + +
Sbjct: 251 YCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMF---KGRMVENKV 307
Query: 307 NRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
N +T ++ L+K + +EA VL E G S + + NA+I GY G + +A
Sbjct: 308 NPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALR 367
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
+ +D+ KG + + G+ + E+ Q ++ LS
Sbjct: 368 VRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLS 409
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 9/260 (3%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L++ V+ + K+ F M G+ + TY + Y K G+ ++ + +M
Sbjct: 212 LMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGG 271
Query: 197 IFPDNFSYRICINSYGARSDLEGMEII---LREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ P+ +Y I+ LE + + E + P +V TY + +K
Sbjct: 272 VLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLV----TYGILVNGLVKFEKF 327
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
D+A+ VL + + + +N LI Y+ GN + LR+ D + + T+
Sbjct: 328 DEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTL 387
Query: 314 LEALMKLGEHEEAEKVLKEWELSGN-SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
L+ + + E+AE+VL E+ LS S + + V+ C + +A I++ L+ +
Sbjct: 388 LQGFCRTNQMEQAEQVL-EYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRN 446
Query: 373 KATTPNSWAVVAAGYFDAGK 392
+ ++ G GK
Sbjct: 447 IKVNDSLLTLLVCGLCKCGK 466
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 22/184 (11%)
Query: 50 LDNWVKNGNKVRVG--ELQRIIRDL-----RKRKRFSQALEVSDWMNRKGICVFAPCDHA 102
+DN V NK+ EL ++ ++ K F++A ++ D M I H
Sbjct: 608 IDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNI-------HP 660
Query: 103 VQLDLIGRVHGFLS------AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHF 154
+HG A+ F ++++ Y AL+ Y + Q D+ S
Sbjct: 661 TIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESIL 720
Query: 155 RKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR 214
++M I + +TY ++ Y K G ++ +L EM A I PD +Y + Y
Sbjct: 721 QEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKE 780
Query: 215 SDLE 218
++LE
Sbjct: 781 NELE 784
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 147/377 (38%), Gaps = 50/377 (13%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
AE +++D + Y ++++ Y + +K L F ++KE G S ++Y ++
Sbjct: 387 AEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLN 446
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
LY K G+ K + EM++ I +N +Y + IN + D I EM
Sbjct: 447 LYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM------- 499
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
+++ L Q D YN LI + +GN + +
Sbjct: 500 -------------LRSGL----------------QPDRAIYNLLIEAFCKMGNMDRAICI 530
Query: 295 WDLEKTACKRY--INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
LEK +R NR + ++E G+ + A L SG NA+I G
Sbjct: 531 --LEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL 588
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
VQ A ++L+ + G +++ ++ GY +G + F+ ++ G
Sbjct: 589 VRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK-----IKESG 643
Query: 413 WKPDPKVITSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGK--GVD 469
K D + ++L G +Q A + IP N +Y+ I R G +
Sbjct: 644 LKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAE 703
Query: 470 ELLDSMKADGIDEDEET 486
+L+ MK DG+ + T
Sbjct: 704 DLMKQMKEDGVPPNIHT 720
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 128/290 (44%), Gaps = 10/290 (3%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A + F N++ E + +L++ Y R ALS +MK G+ L+ +TY+ ++
Sbjct: 282 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILIS 341
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
++K + ++ E K K + Y I+++ ++E E ++ EME + I
Sbjct: 342 GFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCEME-EDGID 400
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
Y S H Y +K V ++ +E + I Y L++LY +G ++ L +
Sbjct: 401 APIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSI 460
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
++ ++ N+ Y ++ + L + A + +E SG D I N +I +C
Sbjct: 461 SKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCK 520
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
G + A ILE + ++ + ++ + GY AG MK+AL
Sbjct: 521 MGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD-------MKSAL 563
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 81 ALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT--YQTYGALL 138
AL+ D M R G CV + + + R H A S + T TY ++
Sbjct: 562 ALDTLDLMRRSG-CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 620
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
Y KA +F K+KE G+ L Y ++ K+G+ + V EM + I
Sbjct: 621 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 680
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
+ F Y I I+ + R D+ E ++++M+ + + + TY S YI N KA D
Sbjct: 681 RNTFIYNILIDGWARRGDVWEAEDLMKQMK-EDGVPPNIHTYTS----YI--NACCKAGD 733
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASL 285
+++AE+ +E+ +G + Y +L
Sbjct: 734 -MQRAEKVIEEMVDVGLKPNVKTYTTL 759
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 141/364 (38%), Gaps = 56/364 (15%)
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP 231
++ Y+K G M+A+ I P+ F + +++Y D+ G + EM+S+
Sbjct: 269 MIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSE- 327
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
+ L TY+ + K N A ++ K+A+ +L +GI Y+ +I + GN
Sbjct: 328 GLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERA 387
Query: 292 LRL-WDLEKTA-----------------------CKRYINR-----------DYITMLEA 316
L ++E+ C R Y +L
Sbjct: 388 EELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNL 447
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
+K+G+ +A + KE E G ++ + + +I G+ + NA AI E+++ G
Sbjct: 448 YVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPD 507
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV 436
+ ++ + G +R ++ ++ + +P + I+ G ++
Sbjct: 508 RAIYNLLIEAFCKMGNMDRAICILEK-----MQKERMQPSNRAFRPIIEGYAVAGDMK-- 560
Query: 437 EAFVAALRTVIPMNRQ-------MYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETK 487
+AL T+ M R Y+A I +R K +LD M GI +E T
Sbjct: 561 ----SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTY 616
Query: 488 EILV 491
I++
Sbjct: 617 TIIM 620
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 19/235 (8%)
Query: 55 KNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCD---HAVQLDLIGRV 111
++G K+ V + ++R K R AL V+ M+ + I P + + + +D R
Sbjct: 641 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI----PRNTFIYNILIDGWARR 696
Query: 112 HGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
AE +K+D TY + +N + +A +M ++G+ + TY
Sbjct: 697 GDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTY 756
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR------SDLEGMEII 223
++ +++ ++ EMK + PD SY + S +R S G+ +
Sbjct: 757 TTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISV 816
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
REM S+ + +D T A H+ + I++ L +A +R+ D FL
Sbjct: 817 CREM-SENDLTVDLRT---AVHWSRWLHKIERTGGALTEALQRIFPPDWNSLEFL 867
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 138/335 (41%), Gaps = 24/335 (7%)
Query: 46 IEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAP---CDHA 102
+ P LD W ++ + LR RK++ + + W+ + F P C +
Sbjct: 112 LPPTLDAW---------DDIFTVAVQLRMRKQWDSIISICRWILLRS--SFKPDVIC-YN 159
Query: 103 VQLDLIGRVHGFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEM 160
+ ++ G+ + AES + L + T TY L+ Y +KA + F +M+
Sbjct: 160 LLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMRNY 219
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGM 220
G+ S + YN + K G +K ++ MK P +Y + IN YG
Sbjct: 220 GLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMA 279
Query: 221 EIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
+ EM S +P+I TY + + + + L +KA +V ++ +E + D YN
Sbjct: 280 LKLFHEMMSHDCKPNIC----TYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNA 335
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
L+ Y+ G ++ L + Y +++A K G ++AE V K+ + G
Sbjct: 336 LMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVG 395
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+ + ++ Y G V E IL + + G
Sbjct: 396 ITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSG 430
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 140/373 (37%), Gaps = 61/373 (16%)
Query: 90 RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQT 147
+K C + + ++L G+ A F + D + TY AL+N + R+
Sbjct: 252 KKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLC 311
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
+KA F +M+E G+ YN +M YS+ G ++ + M+ PD SY I
Sbjct: 312 EKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIL 371
Query: 208 INSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERL 267
+++YG KA D A V K +
Sbjct: 372 VDAYG------------------------------------KAGFQDDAEAVFKDMKRVG 395
Query: 268 EQKDGIGYNFLISLYASLG--NKSEVLRLWDLEKTACKRYINRD-YI--TMLEALMKLGE 322
+ L+S Y+ +G NK E ++ CK + D Y+ +ML +LG+
Sbjct: 396 ITPTMKSHMVLLSAYSKMGSVNKCE-----EILNQMCKSGLKLDTYVLNSMLNLYGRLGQ 450
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
+ E+VL+ E D N +I Y G ++ E + + L KG +W
Sbjct: 451 FGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTS 510
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
Y K + +C L ++ E G PD +L+ +E + V +
Sbjct: 511 RIGAY---SKKKLYLKC----LEIFEEMIDDGCYPDGGTAKVLLAACSNEDQTEQVTTVI 563
Query: 441 AA----LRTVIPM 449
++TV+P+
Sbjct: 564 RTMHKDMKTVLPV 576
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 165/390 (42%), Gaps = 17/390 (4%)
Query: 111 VHG-FLSAESYFSNLK---DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
+HG F + E + ++ D + Y ++ Y R+ + +A++ F +M S
Sbjct: 52 LHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSV 111
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
+YN IM + + G + + V MK I+PD +++ I + S+ +L
Sbjct: 112 QSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNN 171
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
M Q + +Y + + K N +A + + ++ D + +N LI + G
Sbjct: 172 MPGQG-CEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKG 230
Query: 287 NKSEVLRLWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
N E +L+ +++ C + ++ L + G +EA ++L+ G + D
Sbjct: 231 NVQESEKLFSKVMKRGVCPNLFT--FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS 288
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
N +I G+C + + AE L +V G ++ + G+ AG + + ++ A+
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348
Query: 405 SVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA-FVAALRTVIPMNRQMYHAFIKANIR 463
KG+ PD +S+++ L ++G + A F A+ + +Y+ +K +
Sbjct: 349 F-----KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSK 403
Query: 464 NGKGVD--ELLDSMKADGIDEDEETKEILV 491
G + +L+ M G D T ++V
Sbjct: 404 QGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 108/268 (40%), Gaps = 14/268 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L+ +Q +AL + M E G + TYN ++ K G +L +
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
AK PD F++ I+ Y + +++ IL M S I D TY + + KA +
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG-ITPDVITYNTLLNGLCKARKL 512
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
D D K E+ + I YN LI + SE + L+ KT R + D +T+
Sbjct: 513 DNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT---RGLTPDIVTL 569
Query: 314 LEALMKLGEHEEAEK-------VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+ L + E +K + KE++ S Y T I N +I +C V AE +
Sbjct: 570 CTLICGLCSNGELDKAYELFVTIEKEYKFS---YSTAIFNIMINAFCXKLNVSMAEKLFH 626
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTE 394
+ A ++ V+ Y G +
Sbjct: 627 KMGGSDCAPDNYTYRVMIDSYCKTGNID 654
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 125/315 (39%), Gaps = 17/315 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y L+ + + + +A + KM G+ + TYN I+ + K G + +L +
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDA 347
Query: 193 KAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQ-PHIVLDWSTYASAAHFYIKA 250
K PD F+Y IN D+ M + ME H ++ ++T K
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLS---KQ 404
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRD 309
L+ +A ++K E D YN +++ +G S+ + D C I
Sbjct: 405 GLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI-FT 463
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ T+++ K ++A ++L G + D N ++ G C + N + ++
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523
Query: 370 EKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
EKG TPN ++ ++ + K + K ++ +G PD + +++ L
Sbjct: 524 EKG--CTPNIITYNILIESFCKDRKVSEAMELFKE-----MKTRGLTPDIVTLCTLICGL 576
Query: 428 GDEGSVQDV-EAFVA 441
G + E FV
Sbjct: 577 CSNGELDKAYELFVT 591
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 97/242 (40%), Gaps = 4/242 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ Y +QR DKA+ M GI +TYN ++ K + + V D M
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAM 522
Query: 193 KAKNIFPDNFSYRICINSYGA-RSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K P+ +Y I I S+ R E ME + +EM+++ + D T +
Sbjct: 523 LEKGCTPNIITYNILIESFCKDRKVSEAME-LFKEMKTRG-LTPDIVTLCTLICGLCSNG 580
Query: 252 LIDKASDVLKKAEERLEQKDGIG-YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+DKA ++ E+ + +N +I+ + N S +L+ + N Y
Sbjct: 581 ELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTY 640
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
M+++ K G + A L E G V+ C + A I+ +V+
Sbjct: 641 RVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQ 700
Query: 371 KG 372
G
Sbjct: 701 NG 702
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 135/352 (38%), Gaps = 21/352 (5%)
Query: 150 ALSHFRKMK-EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS--YRI 206
AL F ++K E G + TY ++ G++E + DVL EM+ KN+ Y
Sbjct: 23 ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLEGVYIG 81
Query: 207 CINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
+ YG + ++ + M + +P + +Y + + ++ +A V +
Sbjct: 82 IMRDYGRKGKVQEAVNVFERMDFYDCEPSV----QSYNAIMNILVEYGYFSQAHKVYMRM 137
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGE 322
++ D + + + G + LRL ++ C+ + Y ++ K
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCE-FNAVSYCAVISGFYKENC 196
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
EA + E G D N +I C G VQ +E + ++++G ++ +
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAA 442
G G + + +++ +S +G PD +++ + + E ++
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVS-----EGLTPDVISYNTLICGFCKHSKLVEAECYLHK 311
Query: 443 L-RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
+ + + N Y+ I + G + D++L G DE T L+
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 171/419 (40%), Gaps = 21/419 (5%)
Query: 78 FSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQT 133
F+QA +V M +GI AP C +++ R L+A +N+ E
Sbjct: 127 FNQAHKVYLRMKHEGI---APDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVV 183
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ + + +A F KM +GI T+N +M + K G ++ +L ++
Sbjct: 184 YCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVL 243
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVL------DWSTYASAAHFY 247
+ P+ F++ I I + LEG + E E+ H ++ D TY + + Y
Sbjct: 244 KNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGY 303
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
K I AS +LK A+ + D Y LI G+ L L++ +
Sbjct: 304 SKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSI 363
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+++ L + G +A +++ + G S D N VI G C G V +A +L
Sbjct: 364 VLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNA 423
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ KG ++ + GY K + + + S G PD SIL+ L
Sbjct: 424 AIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWS-----HGVTPDVITYNSILNGL 478
Query: 428 GDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDED 483
+DV E F + N Y+ I++ + K + +LL+ ++ G+ D
Sbjct: 479 CKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPD 537
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 123/311 (39%), Gaps = 19/311 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y + + Y R+ + +A+ F +M S +YN IM + + G + + V M
Sbjct: 78 VYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRM 137
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + I PD ++ I I S+ +L M SQ L+ Y + + + N
Sbjct: 138 KHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQG-CELNAVVYCTVISGFYEENY 196
Query: 253 IDKASDVLKKAEERLEQKDGIG-YNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRD 309
+A ++ K RL I +N L+ + G+ E +L + L+ C
Sbjct: 197 QVEAYELFNKM-LRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFT-- 253
Query: 310 YITMLEALMKLGEHE-------EAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+ ++ L + G E EAE L + G D N +I GY G +Q+A
Sbjct: 254 FNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDAS 313
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
IL+D KG ++ + G G + + AL GKG KP + +
Sbjct: 314 RILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEAL-----GKGLKPSIVLYNT 368
Query: 423 ILSKLGDEGSV 433
++ L +G V
Sbjct: 369 LIKGLSQQGLV 379
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 115/292 (39%), Gaps = 16/292 (5%)
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
+A ++ KM G+ TYN I+ YSK G+ + +L + K K PD F+Y I
Sbjct: 276 EAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLI 335
Query: 209 NSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
D++ + E +P IVL Y + + L+ KA ++ +
Sbjct: 336 IGVCQDGDIDHALALFEEALGKGLKPSIVL----YNTLIKGLSQQGLVLKALQLMNDMSK 391
Query: 266 RLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI--TMLEALMKLGEH 323
D YN +I+ +G S+ L L K Y+ + T+++ K +
Sbjct: 392 EGMSPDIWTYNLVINGLCKMGCVSDANNL--LNAAIAKGYLPDIFTFNTLIDGYCKRLKM 449
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
+ A +L G + D N+++ G C ++ + ++EKG ++ ++
Sbjct: 450 DNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNIL 509
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD 435
A K ++ + +G PDP +++S + G + +
Sbjct: 510 IESLCKARKVTEALDLLEE-----IRNRGLIPDPVSFGTVISGFCNNGDLDE 556
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 150/377 (39%), Gaps = 38/377 (10%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E + +Y A++N V ++A + +MK GIA T+ + + +T +
Sbjct: 108 EPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALR 167
Query: 188 VLTEMKAKNIFPDNFSYRICINS-YGARSDLEGMEII--LREMESQPHIVLDWSTYASAA 244
+L M ++ + Y I+ Y +E E+ + + PHI +T+
Sbjct: 168 LLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHI----ATFNKLM 223
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYN-FLISLYASLGNKSEVLRLWDLEKTACK 303
H K + + +L K K+G+ N F +++ + VL + + +
Sbjct: 224 HILCKKGHLQEGEKLLNKV-----LKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAE 278
Query: 304 RYINR-----------DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
Y+++ Y T++ K+G+ ++A ++LK+ + G D ++IIG
Sbjct: 279 NYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGV 338
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
C +G + +A A+ E+ + KG + + + G G + Q M + +G
Sbjct: 339 CQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMND-----MSKEG 393
Query: 413 WKPDPKVITSILSKLGDEGSVQDVEAFVAA------LRTVIPMNRQMYHAFIKANIRNGK 466
PD +++ L G V D + A L + N + + + N
Sbjct: 394 MSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAI 453
Query: 467 GVDELLDSMKADGIDED 483
G+ LDSM + G+ D
Sbjct: 454 GI---LDSMWSHGVTPD 467
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 70/155 (45%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++LN + + + + F+ + E G + +TYN ++ K + + D+L E+
Sbjct: 470 TYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEI 529
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + + PD S+ I+ + DL+ + R ME Q I +TY + + +
Sbjct: 530 RNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLD 589
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN 287
+D A + + ++ D Y +I + +GN
Sbjct: 590 MDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGN 624
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 5/226 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+ + D AL+ F + G+ S + YN ++ S+ G K ++ +M
Sbjct: 330 TYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDM 389
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD ++Y + IN + +L ++ ++ D T+ + Y K
Sbjct: 390 SKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLP-DIFTFNTLIDGYCKRLK 448
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL--EKTACKRYINRDY 310
+D A +L D I YN +++ +V+ + + EK I Y
Sbjct: 449 MDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIIT--Y 506
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
++E+L K + EA +L+E G D VI G+CNNG
Sbjct: 507 NILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNG 552
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 133/361 (36%), Gaps = 53/361 (14%)
Query: 61 RVGELQ---RIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSA 117
+VG++Q RI++D + + + G+C DHA+ L
Sbjct: 305 KVGKIQDASRILKDAKFKGFVPDEFTYCSLI--IGVCQDGDIDHALAL----------FE 352
Query: 118 ESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYS 177
E+ LK Y T L+ +Q KAL M + G++ TYN ++
Sbjct: 353 EALGKGLKPSIVLYNT---LIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLC 409
Query: 178 KTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIV 234
K G ++L AK PD F++ I+ Y R ++ IL M S P ++
Sbjct: 410 KMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVI 469
Query: 235 LDWS-------------------------------TYASAAHFYIKANLIDKASDVLKKA 263
S TY KA + +A D+L++
Sbjct: 470 TYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEI 529
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKLGE 322
R D + + +IS + + G+ E +L+ +E+ + Y M+ A + +
Sbjct: 530 RNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLD 589
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
+ A+K+ E G D+ +I G+C G V + L +E G + ++
Sbjct: 590 MDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGR 649
Query: 383 V 383
V
Sbjct: 650 V 650
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 161/430 (37%), Gaps = 84/430 (19%)
Query: 65 LQRIIRDLRKRKRFSQ--ALEVSDWMNR-----------KGICVFAPCD-----HAVQLD 106
L ++ LR R RFS+ AL V +R + + C+ H LD
Sbjct: 68 LLNLLPRLRHRPRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLD 127
Query: 107 LIGRVHGFLSAESYFSNLKDDE------KTYQTYGALLNCYVRQRQTDKALSHFRKMKEM 160
R F A+++F++L QTY +L + D+A++ F ++
Sbjct: 128 AFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRR 187
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY--------- 211
+A +TY+ +MC +K + + D+L EM + PD Y +
Sbjct: 188 QVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKV 247
Query: 212 -----------GARSDLEGMEIILREM-------------------ESQPHIVLDWSTYA 241
GAR +L ++L + QP ++ TY
Sbjct: 248 MRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVI----TYG 303
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
H ++ +D A+ V + + D YN L+ + G E + WD A
Sbjct: 304 ILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFA 363
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY----DTRIPNAVIIGYCNNGL 357
R + R Y M++ L G +EA ++ W+L DT +I G C NG
Sbjct: 364 GLRNL-RTYNIMIKGLFDSGMVDEA---IELWDLLEKDVACIPDTVTFGTLIHGLCQNGF 419
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKP 415
A I E+ GK S++ + G + G+ + A+ VY ++ G KP
Sbjct: 420 ANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGR-------LVDAVKVYEKMDKDGCKP 472
Query: 416 DPKVITSILS 425
+ + +++S
Sbjct: 473 NSHIYNALIS 482
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 194/506 (38%), Gaps = 75/506 (14%)
Query: 14 HNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELD--NWVKNGNKVRVGELQRIIR- 70
HNA+ F R + + G G RI P L N V R G+L R +
Sbjct: 122 HNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCAR-GDLDRAVTL 180
Query: 71 --DLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE 128
LR+R+ + S M G+ DHA LDL+ E S ++ D
Sbjct: 181 FDSLRRRQVAPDCITYSTLMC--GLAKQDRLDHA--LDLLD--------EMPRSGVQPD- 227
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKM-KEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
Y ALL + + +K + + K+ K+ G + TYN ++ K G++++V +
Sbjct: 228 --VVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGE 285
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
V M A N+ PD +Y I I+ D++G + E+ + +V+D + Y S +
Sbjct: 286 VWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEI-IKTGLVIDAAMYNSLVKGF 344
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL--EKTAC--- 302
+A + +A A ++ YN +I G E + LWDL + AC
Sbjct: 345 CQAGRVQEAWKFWDSAGFA-GLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPD 403
Query: 303 -------------KRYINR------------------DYITMLEALMKLGEHEEAEKVLK 331
+ N+ Y +M+ L +G +A KV +
Sbjct: 404 TVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYE 463
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+ + G ++ I NA+I G+C +A I + + G + T ++ + G A
Sbjct: 464 KMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAE 523
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-----EAFVAALRTV 446
K + + + G+ PD S++ L + + D + L+
Sbjct: 524 KYQEASSVAREMVE-----NGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVD 578
Query: 447 IPMNRQMYHAFIKANIRNGKGVDELL 472
+ M+ + H A GK VDE L
Sbjct: 579 VMMHNILIHGLCSA----GK-VDEAL 599
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 105/265 (39%), Gaps = 39/265 (14%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
Y AL++ + + +T A+ + KM + G + + +TYN ++ K +Y++ V E
Sbjct: 475 HIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVARE 534
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M PD I +YG+ ++R + S I
Sbjct: 535 MVENGFTPD-------ITTYGS---------LIRGLFSDKKI------------------ 560
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DL-EKTACKRYINRD 309
D A + K+ + + D + +N LI S G E L ++ D+ EK C +
Sbjct: 561 --DDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL-VT 617
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+++ L + G ++A + G D N I G C+ + +L++++
Sbjct: 618 YNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVL 677
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTE 394
+G T +W ++ G +
Sbjct: 678 SRGIIPTVITWNILVRAVIKYGPIQ 702
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 147/366 (40%), Gaps = 12/366 (3%)
Query: 136 ALLNCYVRQRQTDKALSHFRK-MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
L+N YV Q +A S + M G TYN +M K G D++ EM
Sbjct: 359 TLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSR 418
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
+ P+ +Y I +N LE ++L EM ++ + ++ Y + +
Sbjct: 419 RGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSAR-GLTINSVIYNCLICALCRKEKVH 477
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITML 314
A ++L + + + D YN LI + E RL+ N Y T++
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
AL++ G ++A ++ + G + D N +I +C G ++ + E ++ G
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLG 597
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
S ++ G GK + F+ ++ A++ +G+ PD S+L+ L G ++
Sbjct: 598 ADTISCNIMINGLCKVGKVDNAFEFLRDAIN-----RGFVPDIVTYNSVLNGLCKVGRIK 652
Query: 435 DVEAFVAALRT--VIPMNRQMYHAFIKANIRNGKGVDELLDSMKA--DGIDEDEETKEIL 490
+ L+ V P + Y+ FI + G D L + +G T +L
Sbjct: 653 EALNLFDRLQVEGVRP-DAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVL 711
Query: 491 VCTMEK 496
V T+ K
Sbjct: 712 VYTLLK 717
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 157/407 (38%), Gaps = 31/407 (7%)
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
K +C+F D A L HG + + YQT L++ ++ Q +A
Sbjct: 226 KALCMFNEVDSACSLLRDMTKHGCVP----------NSIVYQT---LIHALSQKNQVSEA 272
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
L +M MG T+ND++ K + ++ M + +PDN +Y ++
Sbjct: 273 LKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHG 332
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE-Q 269
L IL ++ + +L+ + + Y+ + + +A L + Q
Sbjct: 333 LCRIGKLNEARKILIKIPCPNNAILN-----TLINGYVMSGQLKEAQSFLNETMINFGFQ 387
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
D YN L+ G+ S L ++ + C+ + Y ++ L K G EEA
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNV-ITYAILVNGLCKAGLLEEAGL 446
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
VL E G + ++ I N +I C V A +L ++ KG ++ + G
Sbjct: 447 VLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLC 506
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA-ALRTVI 447
+ + F+ L G + +++ L G+ Q V L
Sbjct: 507 KVDRIDEAFRLFHNMLL-----DGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGC 561
Query: 448 PMNRQMYHAFIKANIRNG---KGVDELLDSMKADGIDEDEETKEILV 491
+++ Y+ IKA + G KG+ EL + M DG+ D + I++
Sbjct: 562 TLDKITYNGLIKAFCKVGNIEKGL-ELYEQMIMDGLGADTISCNIMI 607
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 123/319 (38%), Gaps = 55/319 (17%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E TY L+N + ++A +M G+ ++++ YN ++C + + +
Sbjct: 422 EPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALN 481
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS-----TYAS 242
+L+EM K PD F+Y I YG L ++ I +++LD + TY +
Sbjct: 482 LLSEMCTKGCKPDLFTYNSLI--YG----LCKVDRIDEAFRLFHNMLLDGAVANNVTYNT 535
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
H ++ KA ++ R D I YN LI + +GN + L L++
Sbjct: 536 LIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYE------ 589
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+ + G DT N +I G C G V NA
Sbjct: 590 -----------------------------QMIMDGLGADTISCNIMINGLCKVGKVDNAF 620
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVI 420
L D + +G ++ V G G+ +K AL+++ ++ +G +PD
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLCKVGR-------IKEALNLFDRLQVEGVRPDAFTY 673
Query: 421 TSILSKLGDEGSVQDVEAF 439
+ +S EG V D F
Sbjct: 674 NTFISWQCKEGMVNDACLF 692
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 135/332 (40%), Gaps = 24/332 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+ R + +K F M+ G +TYN ++ K + ++ D+L E+
Sbjct: 200 TFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEV 259
Query: 193 KAKN-IFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYI 248
+++N PD +Y I+ + LE ++ EM +P +V T+ +
Sbjct: 260 QSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVV----TFNVLIDGFG 315
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K + A + +K D + + LI Y G+ L++WD+ K
Sbjct: 316 KIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIY 375
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ AL K EA +L++ + S I N VI G+C G V A I+ ++
Sbjct: 376 TYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEM 435
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
EK ++ ++ G+ G+ K L++ G PD I+S+++ L
Sbjct: 436 EEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAI-----GCAPDNITISSLVACLL 490
Query: 429 DEG-----------SVQDVEAFVAALRTVIPM 449
G + +D+ ++LR PM
Sbjct: 491 KAGKPSEAFHIVQTASEDLNLSFSSLRKTFPM 522
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 8/231 (3%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLK 125
II RK + A + + M R GI P V +D G++ ++AE+ +
Sbjct: 275 IISGFRKLGKLEAASVLFEEMIRSGI---EPTVVTFNVLIDGFGKIGNMVAAEAMHEKMA 331
Query: 126 DDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYE 183
T+ +L++ Y R L + MK ++ + TY+ I+ K +
Sbjct: 332 SYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIH 391
Query: 184 KVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASA 243
+ D+L ++K ++FP F Y I+ + +++ +I+ EME + D T+
Sbjct: 392 EARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEK-RCRPDKVTFTIL 450
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
+ + +A D+ KK D I + L++ G SE +
Sbjct: 451 IIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHI 501
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 146/357 (40%), Gaps = 15/357 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y + ++A M G + TYN ++ K G+YE+ +V EM
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 331
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD+ +YR + + D+ E + +M S+ +V D ++S + ++
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR-DVVPDLVCFSSMMSLFTRSGN 390
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYI 311
+DKA +E D + Y LI Y G S + L ++ + C + Y
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV-VTYN 449
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T+L L K EA+K+ E D+ +I G+C G +QNA + + + EK
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
++ + G+ G + + +S K P P + +++ L +G
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS-----KEILPTPISYSILVNALCSKG 564
Query: 432 SVQDVEAFVA---ALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDED 483
+ EAF + I + ++ IK R+G D L+ M ++G D
Sbjct: 565 HL--AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 130/322 (40%), Gaps = 43/322 (13%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L+ Y R+ A++ +M + G A+ +TYN I+ K + + EM
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ +FPD+++ I I+ + +L+ + ++M+ + I LD TY + + K I
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK-EKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD----------------- 296
D A ++ + I Y+ L++ S G+ +E R+WD
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 297 ----------------LEKTACKRYINR--DYITMLEALMKLGEHEEAEKVLK--EWELS 336
LEK + ++ Y T++ ++ +A ++K E E
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G D N+++ G+C ++ AE +L ++E+G +++ + G+
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Query: 397 FQCMKAALSVYVEGKGWKPDPK 418
F+ L +G+ PD K
Sbjct: 712 FRIHDEMLQ-----RGFSPDDK 728
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 112/257 (43%), Gaps = 13/257 (5%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
AL+ VR + A ++++ G+ ++ T N ++ K G+ EKV L++++ K
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEK 264
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANL 252
++PD +Y I++Y ++ +E ++ M + P + TY + + K
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY----TYNTVINGLCKHGK 320
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI- 311
++A +V + D Y L+ G+ E +++ ++ R + D +
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS---RDVVPDLVC 377
Query: 312 --TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+M+ + G ++A + +G D I +I GYC G++ A + +++
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 370 EKGKATTPNSWAVVAAG 386
++G A ++ + G
Sbjct: 438 QQGCAMDVVTYNTILHG 454
>gi|414871052|tpg|DAA49609.1| TPA: hypothetical protein ZEAMMB73_878928 [Zea mays]
Length = 807
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 149/359 (41%), Gaps = 16/359 (4%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TY +++ + ++A F+ + E G+ L +T N ++ + G ++P ++
Sbjct: 286 HTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEM 345
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ + PD +Y I I + D+E I +++ Q I L+ TY+ + K
Sbjct: 346 MRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQ-GIELNIVTYSVLINALFKKG 404
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI---NR 308
L + ++ + + D I Y+ LI + LG L++W+L C + + +
Sbjct: 405 LFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRALQVWNL--MCCSQRVIPTSV 462
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
+++++L L K G +EA L+ D + N VI GY G + NA + + +
Sbjct: 463 NHVSILLGLCKKGFLDEARSYLETVASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAI 522
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
+ G T + + GY G M + + ++ P T+++ L
Sbjct: 523 IMAGMCPTIVTCNSLLYGYCKFGDLH-----MAESYFMAIQLSDLLPTTVTYTTLMDALS 577
Query: 429 DEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDED 483
+ G V + + + + + P N Y IK + D +LD M +G D D
Sbjct: 578 EAGKVHSMLSIFKEMTGKGIRP-NAITYSVVIKGLCKQLMFHDAKNVLDDMYREGFDAD 635
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 53/301 (17%), Positives = 113/301 (37%), Gaps = 38/301 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+ AL N Y R + AL KM + + +S TY+ + LYS + + + EM
Sbjct: 149 VWDALANSYARAQMNHDALYVLSKMNSLNMQISITTYDSL--LYSLR-KADVALAIFKEM 205
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI-------------VLDWS- 238
++ I P ++S+ I I+ + + L+E + + +W
Sbjct: 206 ESCGIPPSDYSHGILIDGLCKQGKIGEALSFLQETRKEGKFKPLGMTFNTLMSALCNWGF 265
Query: 239 ---------------------TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
TY++ H K +++A D+ + E + D + N
Sbjct: 266 IQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNS 325
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
LI+ + G+ E+ ++ ++ + Y ++ + G+ EE ++ K+ G
Sbjct: 326 LINGFRLHGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQG 385
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+ + +I GL E + ++ G +++++ G+ G+ R
Sbjct: 386 IELNIVTYSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRAL 445
Query: 398 Q 398
Q
Sbjct: 446 Q 446
>gi|255569835|ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534795|gb|EEF36485.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 913
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 142/337 (42%), Gaps = 41/337 (12%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L+N ++ + D AL+ ++++K +G++ + TY ++ G E+ V+ EM+
Sbjct: 204 LMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEESG 263
Query: 197 IFPDNFSYR-----ICINSY------------GARSDL------------------EGME 221
I P F+Y +C+N GA L + E
Sbjct: 264 ITPTGFAYTAYIEGLCVNEMSDLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDKAE 323
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
+LR+ME + +V D Y + + KA + KA L + + + + + ++
Sbjct: 324 SVLRDMEKEG-MVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHC 382
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
LG SEV+ ++ K+ Y +++AL KLG+ EEA +L E ++ + D
Sbjct: 383 LCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMD 442
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+I GYC G V +A + E++ E G ++ V+ +G+ G +
Sbjct: 443 VMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLD 502
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA 438
Y++ + KP+ ++ L G V++ EA
Sbjct: 503 -----YMQTQKLKPNSITYNVVVESLCMGGKVKEAEA 534
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 155/380 (40%), Gaps = 20/380 (5%)
Query: 122 SNLKDDEK-----TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLY 176
S L+D EK Y AL+ + + KA + +M G+ ++ + I+
Sbjct: 324 SVLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCL 383
Query: 177 SKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLD 236
+ G + +V D + K+ +F D SY +++ LE +L EM+ + I +D
Sbjct: 384 CELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMK-QINMD 442
Query: 237 WSTYASAAHFY-IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
Y + + Y + N++D A V ++ E + D + Y+ L+S + G +E L L
Sbjct: 443 VMHYTTLINGYCCQGNVVD-AFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLL 501
Query: 296 DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPN--AVIIGYC 353
D +T + + Y ++E+L G+ +EAE V E D + N A+I GYC
Sbjct: 502 DYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIE------DKSLDNYFAMINGYC 555
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
A + L KG + ++ + G + ++ L++ VE +
Sbjct: 556 KANHTAGAAKLFFRLSVKGHVKRSCCYNLL-KNLCEEGDNDGILMLLETMLNLNVEPSKF 614
Query: 414 KPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDEL 471
K+ TS+ G G + F L+ + Y I + R K +L
Sbjct: 615 IYG-KLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDL 673
Query: 472 LDSMKADGIDEDEETKEILV 491
MK GI D T +L+
Sbjct: 674 FHDMKQRGIKPDLVTFTVLL 693
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 150/376 (39%), Gaps = 26/376 (6%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L+N Y Q A F +M+E GI + +TY+ ++ + + G + ++L M+
Sbjct: 446 YTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQ 505
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ + P++ +Y + + S ++ E + +E + Y + + Y KAN
Sbjct: 506 TQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIEDKS-----LDNYFAMINGYCKANHT 560
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD----LEKTACKRYINRD 309
A+ + + + K YN L +L G+ +L L + L K +
Sbjct: 561 AGAAKLFFRLSVKGHVKRSCCYNLLKNLCEE-GDNDGILMLLETMLNLNVEPSKFIYGKL 619
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ ++ A G +A+ V G + D +I YC ++ A + D+
Sbjct: 620 FTSLCRAGGAAG-MRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMK 678
Query: 370 EKGKATTPNSWAVVAAGY--------FDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI- 420
++G ++ V+ G+ + A + G + + AL+++ E K + P VI
Sbjct: 679 QRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKGGNEDIFDALAIWTEMKDTEIKPDVIF 738
Query: 421 -TSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSM 475
T ++ S+ D + F + + + Y A + + G VD LLD M
Sbjct: 739 YTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLSGCCQRGD-VDRAVNLLDQM 797
Query: 476 KADGIDEDEETKEILV 491
GI D T L+
Sbjct: 798 SLKGISPDTRTMSALL 813
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 80/404 (19%), Positives = 145/404 (35%), Gaps = 77/404 (19%)
Query: 115 LSAESYFSNLKDD--EKTYQTYGALLN--CY------------------VRQRQTDKALS 152
+SA S+F+ LKD + TY A++ CY T +S
Sbjct: 81 ISALSFFNQLKDSGFKHDISTYAAIIRILCYWGLHKQLRSIFLDIIYVSCNDNDTPFEIS 140
Query: 153 HFRKMKEMGIA---------LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFS 203
HF G + Y+ ++ Y G ++ DVL +M + P F
Sbjct: 141 HFLDTLSDGFVDVDSKKQSLFMSKVYDALVKAYVSVGMFDDAIDVLFQMGRRRFVPHIFI 200
Query: 204 YRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKA 263
+NS S L+ + ++++ D+ TYA +++A V+K+
Sbjct: 201 CNFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDY-TYAIVIKALCINGSLEEAMYVIKEM 259
Query: 264 EERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEH 323
EE G Y I E L
Sbjct: 260 EESGITPTGFAYTAYI-----------------------------------EGLCVNEMS 284
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
+ +VL+ W+ + D + G+CN AE++L D+ ++G + + +
Sbjct: 285 DLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDKAESVLRDMEKEGMVPDMHCYTAL 344
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL 443
+ AG + + + +S KG K + ++ SIL L + G +V
Sbjct: 345 ICRFCKAGNLLKAYAFLNEMMS-----KGVKVNCVIVGSILHCLCELGMHSEVVDQFNQF 399
Query: 444 RTV-IPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDED 483
+++ + ++ Y+ + A + GK ++E LLD MK I+ D
Sbjct: 400 KSLGLFLDGVSYNNVVDALCKLGK-LEEAITLLDEMKMKQINMD 442
>gi|410110077|gb|AFV61118.1| pentatricopeptide repeat-containing protein 123, partial
[Coelocarpum swinglei]
Length = 440
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 182/410 (44%), Gaps = 25/410 (6%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRV-GEL---QRIIRDLRKRKRFSQALE 83
++ T ++I+ G G + L +W++ + RV G+L +I RK +S+A+
Sbjct: 14 DRYTYSTLITHFGKEGL-FDAAL-SWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 71
Query: 84 VSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGALLN 139
+ + R G F P + +++ G+ F A S S ++ +Y ALL
Sbjct: 72 IFSRLKRSG---FTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNASSYSALLT 128
Query: 140 CYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP 199
YV ++ +ALS F +M+E+ L T N ++ +Y + G ++ + M+ I P
Sbjct: 129 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 188
Query: 200 DNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
+ SY + YG ++L G I L + + +I + TY S Y K +KA+++
Sbjct: 189 NVVSYNTLLRVYG-DAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 247
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
+++ + R + + I Y+ +IS++ +G L+ +T+ + TM+ A +
Sbjct: 248 IQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEIDQILFQTMIXAYER 307
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIP-NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
G A+++L E + N IP + I G ++ A + ++ G+
Sbjct: 308 AGLVAHAKRLLHELKRPDN-----IPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDIT 362
Query: 379 SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
+ + + K ++ ++ +Y G G+ PD VI +L+ G
Sbjct: 363 VFERMIHLF---SKYKKYANVVEVFDKMY--GLGYFPDSNVIALVLNAYG 407
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 145/341 (42%), Gaps = 14/341 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ Y + +A FR+MK+ G+ + +T N + K G+ ++ + M
Sbjct: 337 TYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSM 396
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
AK PD FSY ++ Y + M + M+S I + + H Y K +
Sbjct: 397 TAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSN-GIAANCHVFTILIHAYAKRGM 455
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+D A + + +++ D + Y+ +IS ++ +G ++ + ++ + Y +
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSS 515
Query: 313 MLEALMKLGEHEEAEKVLKEWELSG-NSYDTRIPNAVIIGYCNNGLVQNAEAILE---DL 368
+++ G +A++++ E G D ++VI C +G V +A I + D+
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDI 575
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
E+ T NS + GY GK ++ F+ + A +E G +PD ++L
Sbjct: 576 GERPGVITFNS---LIDGYCLVGKMDKAFKILDA-----MEVVGVEPDIVTYNTLLDGYF 627
Query: 429 DEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGV 468
G + D + F R + N Y + R G+ V
Sbjct: 628 KNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTV 668
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 152/397 (38%), Gaps = 57/397 (14%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM-CLYSKTGQYEKVPDV 188
T+ TY L++C R R+ D L+ F + G+ + +T N ++ CL E V +
Sbjct: 156 TFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVL 215
Query: 189 LTEMKAKNIFPDNFSYRI-----CINSYGARS-DLEGMEI-------------------- 222
L M P+ SY I C NS R+ DL M
Sbjct: 216 LHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGF 275
Query: 223 -----------ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
+ EM Q + D TY KA +DKA VL++ Q D
Sbjct: 276 FNEGETGKACSLFHEMTRQ-GVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEK 328
+ Y+ +I YA+LG E +++ K KR + + +T L +L K G +EA +
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMK---KRGLIPNIVTCNSFLASLCKHGRSKEAAE 391
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
G+ D ++ GY + G + + + G A + + ++ Y
Sbjct: 392 FFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYA 451
Query: 389 DAGKTERGFQCMKAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRT 445
G + A+ ++ E +G PD ++++S G + D +E F +
Sbjct: 452 KRGMVDD-------AMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVAR 504
Query: 446 VIPMNRQMYHAFIKANIRNGKGV--DELLDSMKADGI 480
I N +Y + I+ +G V EL+ M GI
Sbjct: 505 GIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGI 541
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 126/307 (41%), Gaps = 11/307 (3%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ + + +T KA S F +M G+ +TYN I+ K +K VL +M
Sbjct: 268 YSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMT 327
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKA 250
PD +Y I+ Y L+ + REM+ + P+IV S AS K
Sbjct: 328 TDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLAS----LCKH 383
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+A++ + + D Y L+ YAS G ++++ L++ K+ +
Sbjct: 384 GRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVF 443
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++ A K G ++A + E + G S D + VI + G + +A +V
Sbjct: 444 TILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVA 503
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
+G ++ + G+ G G K +S + +PD +S+++ L +
Sbjct: 504 RGIQPNTAVYSSIIQGFCMHG----GLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKD 559
Query: 431 GSVQDVE 437
G V D
Sbjct: 560 GRVMDAH 566
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 146/358 (40%), Gaps = 21/358 (5%)
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
++AL +++M G+ S TY+ +M + G K+ ++L EMK+ + P+ ++Y IC
Sbjct: 217 NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTIC 276
Query: 208 INSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE 264
I + G ++ I +EM+ + P ++ TY A +DKA ++ K
Sbjct: 277 IRALGRARRIDDAWGIFKEMDDEGCGPDVI----TYTVLIDALCAAGKLDKAKELYVKMR 332
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHE 324
D + Y L+ + +G+ V R W+ + Y ++EAL K G+ +
Sbjct: 333 ASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVD 392
Query: 325 EAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
A +L G + N +I G + A +LE++ G T S+ +
Sbjct: 393 RAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFI 452
Query: 385 AGYFDAGKTERG---FQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA 441
Y +G + F+ MK +G P + L L + G + + E
Sbjct: 453 DYYGKSGDPAKAIDTFETMKK--------RGIMPSIAACNASLYTLAETGRISEAEDIFN 504
Query: 442 ALRTV-IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETKEILVCTMEK 496
L + + Y+ +K + G+ +LL M + G + D L+ T+ K
Sbjct: 505 DLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYK 562
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 125/301 (41%), Gaps = 6/301 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY + R R+ D A F++M + G +TY ++ G+ +K ++ +M
Sbjct: 272 TYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKM 331
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+A + PD +Y ++ +G DLE ++ EME + D TY K+
Sbjct: 332 RASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGY-APDVVTYTILIEALCKSGD 390
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+D+A D+L + + YN +I E L L + ++ + Y+
Sbjct: 391 VDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVL 450
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ K G+ +A + + G NA + G + AE I DL + G
Sbjct: 451 FIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCG 510
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
+ ++ ++ Y AG+ ++ Q + +S KG +PD +I S+++ L G
Sbjct: 511 LSPDSVTYNMLMKCYSKAGQIDKATQLLSEMIS-----KGCEPDVMIINSLINTLYKAGR 565
Query: 433 V 433
V
Sbjct: 566 V 566
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 127/312 (40%), Gaps = 19/312 (6%)
Query: 154 FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGA 213
RKM E+G L+ +YN ++ L G + V M ++ + P +Y + + G
Sbjct: 189 LRKMTEVGFILNAYSYNGLIHLLLP-GFCNEALKVYKRMISEGMKPSMKTYSALMVALGR 247
Query: 214 RSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
R D + +L EM+S +P+I TY +A ID A + K+ ++
Sbjct: 248 RGDTRKIMNLLEEMKSIGLRPNIY----TYTICIRALGRARRIDDAWGIFKEMDDEGCGP 303
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
D I Y LI + G + L+ + + YIT+++ K+G+ E ++
Sbjct: 304 DVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFW 363
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
E E+ G + D +I C +G V A +L+ + KG +++ + G A
Sbjct: 364 NEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKA 423
Query: 391 GKTERGFQCMK---------AALS--VYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
+ + + ++ A S ++++ G DP + G + + A
Sbjct: 424 RRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAAC 483
Query: 440 VAALRTVIPMNR 451
A+L T+ R
Sbjct: 484 NASLYTLAETGR 495
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 139/320 (43%), Gaps = 31/320 (9%)
Query: 115 LSAESYFSNLKDD---EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
L A++ F + T ++Y L++ + T+KAL F MK G + TYN
Sbjct: 777 LDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNL 836
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP 231
++ + K+ + K+ D+ +EM+++ P+ ++ I I++ ++L + E+ S
Sbjct: 837 LLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSG- 895
Query: 232 HIVLDWS----TYASAAHFYIKANLIDKASDVLKKAEERLEQKDG---IGYNFLISLYAS 284
D+S TY +KA ++ +K EE L+ G + YN LI+
Sbjct: 896 ----DFSPTPCTYGPLIDGLLKAG---RSEQAMKIFEEMLDYGCGPNSVIYNILIN---G 945
Query: 285 LGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
G E+ +L K K I D Y ++E L G +EA + +E +L+G D
Sbjct: 946 FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPD 1005
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
T N +I G + + A ++ ++ +G + ++ + AGK +
Sbjct: 1006 TVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVD------- 1058
Query: 402 AALSVYVEGKGWKPDPKVIT 421
A+ +Y E + +P V T
Sbjct: 1059 VAVKMYEELQLVGLEPSVFT 1078
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 121/299 (40%), Gaps = 54/299 (18%)
Query: 137 LLNCYVRQRQTDKALSHFRKM-KEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
L+ ++++ A + F K K +GI + +YN +M + EK ++ +MK+
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
P+NF+Y + ++++G K+ I+K
Sbjct: 826 GTHPNNFTYNLLLDAHG------------------------------------KSKRINK 849
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW------DLEKTACKRYINRD 309
D+ + R + + I +N +IS N ++ L L+ D T C
Sbjct: 850 LYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCT------ 903
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ L+K G E+A K+ +E G ++ I N +I G+ +G + A + + +V
Sbjct: 904 YGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMV 963
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
++G S+ ++ G+ + Q + ++ G PD I++ LG
Sbjct: 964 KEGIRPDLKSYTILVECLCITGRIDEAVQYFEE-----LKLTGLDPDTVSYNFIINGLG 1017
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 21/265 (7%)
Query: 79 SQALEVSDWMNRKGIC-VFAPCDHAV-QLDLIGRVHGFLSAESYFSNLKDD--EKTYQTY 134
++A++ + M ++GI A C+ ++ L GR+ AE F++L TY
Sbjct: 462 AKAIDTFETMKKRGIMPSIAACNASLYTLAETGRIS---EAEDIFNDLHKCGLSPDSVTY 518
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
L+ CY + Q DKA +M G + N ++ K G+ + + +K
Sbjct: 519 NMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKN 578
Query: 195 KNIFPDNFSYRICINSYGARSD-LEGMEII--LREMESQPHIVLDWSTYASAAHFYIKAN 251
+ P +Y I + G L+ +E+ + E P+ + T+ S K +
Sbjct: 579 LKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTI----TFNSLLDCLSKND 634
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+D A + + D + YN +I Y + W + K++++ DY+
Sbjct: 635 AVDLALKMFCRMTMMNCNPDVLTYNTII--YGLIREGRIDYAFWFFHQM--KKFLSPDYV 690
Query: 312 ---TMLEALMKLGEHEEAEKVLKEW 333
T++ +++ G E+A KV+ E+
Sbjct: 691 TLCTLIPGVVRHGRVEDAIKVVMEF 715
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 108/277 (38%), Gaps = 47/277 (16%)
Query: 10 NTQIHNAVFSRFYYTNRINKTT--LYSIISPLGNPG-TRIEPELDNWVKNGNKVRVGEL- 65
N HN + S +N +NK Y ++S +P P +D +K G + ++
Sbjct: 865 NAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIF 924
Query: 66 ---------------QRIIRDLRKRKRFSQALEVSDWMNRKGI-------CVFAPCDHAV 103
+I K A E+ M ++GI + C
Sbjct: 925 EEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVEC---- 980
Query: 104 QLDLIGRVHGFLSAESYFSNLKD---DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEM 160
L + GR+ A YF LK D T +Y ++N + R+ D+ALS F +MK
Sbjct: 981 -LCITGRID---EAVQYFEELKLTGLDPDTV-SYNFIINGLGKSRRLDEALSLFSEMKNR 1035
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGM 220
GI+ TYN ++ G+ + + E++ + P F+Y I + + +
Sbjct: 1036 GISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQA 1095
Query: 221 EIILREMESQPHIVLDWS----TYASAAHFYIKANLI 253
+ ++M +V+ S T+A + Y +A L+
Sbjct: 1096 FSVFKKM-----MVVGCSPNTETFAQLPNKYPRAGLV 1127
>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
Length = 546
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 174/419 (41%), Gaps = 71/419 (16%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L+ + + KA S F K+K GIA + YN ++ LY K Y++ +L EMK
Sbjct: 98 FSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMK 157
Query: 194 AKNIFPDNFSYRICINSYG-ARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD SY I IN+Y ++ LE ++ L EM+++ I LD +T Y K +
Sbjct: 158 EAGLMPDTVSYTILINAYAESQKYLEAKQVFL-EMKTKG-IQLDVTTCNMMIDVYGKLEM 215
Query: 253 IDKASDVLKKAEERLE-QKDGIGYNFLISLYASLGNKSEVLRLW---------------- 295
+ A ++ + L Q++ + YN +I +Y SE ++
Sbjct: 216 VRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITY 275
Query: 296 ---------DLEKTACKRYINR-----------DYITMLEALMKLGEHEEAEKVLKEWEL 335
L+ R + + Y T++ K G+++ A + K
Sbjct: 276 NTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLRE 335
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAG--------- 386
G D + ++I+ Y GLV +A+ +LE+L + + +++A
Sbjct: 336 KGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAKAEKLEEAAKL 395
Query: 387 YF---DAGKTERGFQCMKAALSVYVEGK---------------GWKPDPKVITSILSKLG 428
Y+ +AG+ + K+ + ++V K G+ PD + +L+ G
Sbjct: 396 YWRSHEAGEIKESV-TYKSMIQLFVRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYG 454
Query: 429 DEGSVQDVEAFVAALRTV-IPMNRQMYHAFIK--ANIRNGKGVDELLDSMKADGIDEDE 484
++D E +R + ++++ +K + R + +++ ++K +G+D DE
Sbjct: 455 QLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDARKIREAEDMFAALKLEGLDGDE 513
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 153/374 (40%), Gaps = 52/374 (13%)
Query: 76 KRFSQALEVSDWMNRKGICV-FAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD---EKTY 131
+++ +A +V M KGI + C+ + +D+ G++ AE F ++ ++
Sbjct: 179 QKYLEAKQVFLEMKTKGIQLDVTTCN--MMIDVYGKLEMVRDAEELFWSMSKTLGIQQNV 236
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMK-EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
TY ++ Y +A + F M+ + G+ + +TYN I+ L+ T Q+EK ++
Sbjct: 237 VTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVR 296
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+M+ + I P+ +Y I+ YG K
Sbjct: 297 KMQQRGIEPNAVTYSTLISIYG------------------------------------KT 320
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
D+A+ + K E+ + D I Y +I +Y G + RL LE+ + RD
Sbjct: 321 GKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRL--LEELKQPDIVPRD- 377
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T + L K + EEA K+ +G ++ ++I + N +NA + E++ E
Sbjct: 378 -TAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRSKNAIDVFENMRE 436
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G + V+ A Y + E L + + +G + +V +L GD
Sbjct: 437 SGFLPDSETTVVLLAAYGQLRQLEDA-----EKLYLDMRERGCTLEKEVHFQMLKLYGDA 491
Query: 431 GSVQDVEAFVAALR 444
+++ E AAL+
Sbjct: 492 RKIREAEDMFAALK 505
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 5/253 (1%)
Query: 120 YFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
Y N E TY +L + Q +KA+ RKM++ GI + +TY+ ++ +Y KT
Sbjct: 261 YMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKT 320
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
G+Y++ + ++ K D Y+ I Y R+ L L E QP IV
Sbjct: 321 GKYDRAAFLFKTLREKGFEMDEILYQSMIVVY-ERAGLVAHAKRLLEELKQPDIV----P 375
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
+A KA +++A+ + ++ E E K+ + Y +I L+ + +++ +
Sbjct: 376 RDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRSKNAIDVFENMR 435
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
+ + + +L A +L + E+AEK+ + G + + + ++ Y + ++
Sbjct: 436 ESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDARKIR 495
Query: 360 NAEAILEDLVEKG 372
AE + L +G
Sbjct: 496 EAEDMFAALKLEG 508
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 97/473 (20%), Positives = 188/473 (39%), Gaps = 82/473 (17%)
Query: 78 FSQALEVSDWMNRKGICVFAPCDHA--VQLDLIGRVHGFLSAESYFSNL--KDDEKTYQT 133
+ ++L + DWM KG +AP A V L + R + AE + KD T
Sbjct: 5 WQRSLALHDWMIEKG--GYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFT 62
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L++ Y R + + A+ ++M+ GI + ++ ++ L K Y K + +++K
Sbjct: 63 FSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLK 122
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
A I PD Y IN YG + + +L EM+ + ++ D +Y + Y ++
Sbjct: 123 ASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMK-EAGLMPDTVSYTILINAYAESQKY 181
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-----LWDLEKTACKRYINR 308
+A V + + + Q D N +I +Y L E++R W + KT +
Sbjct: 182 LEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKL----EMVRDAEELFWSMSKTLGIQQNVV 237
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI---------PNAV---IIGYCNNG 356
Y TM+ KV KE EL +++ PN + I + +
Sbjct: 238 TYNTMI-------------KVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGL 284
Query: 357 LVQNAEA--ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
+Q+ +A ++ + ++G +++ + + Y GK +R A L + KG++
Sbjct: 285 TLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRA-----AFLFKTLREKGFE 339
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFVAALRT--VIPMNRQM------------------- 453
D + S++ G V + + L+ ++P + +
Sbjct: 340 MDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAKAEKLEEAAKLYWRS 399
Query: 454 -----------YHAFIKANIRN--GKGVDELLDSMKADGIDEDEETKEILVCT 493
Y + I+ +RN K ++ ++M+ G D ET +L+
Sbjct: 400 HEAGEIKESVTYKSMIQLFVRNKRSKNAIDVFENMRESGFLPDSETTVVLLAA 452
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 132/311 (42%), Gaps = 28/311 (9%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E Y +++ RQ D AL M++MGI +TYN ++ +G++
Sbjct: 175 EPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSAR 234
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDL-----EGMEIILREMESQPHIVLDWSTYAS 242
+L++M I PD ++ I+ +G L + E+I R ++ P+IV TY S
Sbjct: 235 ILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVD--PNIV----TYNS 288
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
+ L+D+A VL + + + YN L++ Y KS+ R+ D K C
Sbjct: 289 LINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYC----KSK--RVDDAMKILC 342
Query: 303 KRY---INRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
++ D Y T+ + + G+ AEKVL G D N ++ G C +G
Sbjct: 343 VMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHG 402
Query: 357 LVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
++ A LEDL + ++ ++ G A K E + L + KG PD
Sbjct: 403 KIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWY-----LFCSLALKGVSPD 457
Query: 417 PKVITSILSKL 427
T+++ L
Sbjct: 458 VITYTTMMIGL 468
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 99 CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
C H + LD +V F+ ++ +F N TY L+N Y + ++ D A+ M
Sbjct: 294 CIHGL-LDEAKKVLNFMVSKGFFPN-------AVTYNTLVNGYCKSKRVDDAMKILCVMS 345
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
G+ T TYN + Y + GQ+ VL M + + PD +++ + ++ +E
Sbjct: 346 HDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIE 405
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
+ L +++ + V+ TY KAN ++ A
Sbjct: 406 KALVKLEDLQ-KSETVVGIITYNIIIKGMCKANKVEDA 442
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 122/305 (40%), Gaps = 12/305 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
++ L++C+ R + ALS KM ++G S +T+ ++ + + ++ ++ ++
Sbjct: 110 SFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQI 169
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
P+ Y I+S ++ +L ME I D TY S +
Sbjct: 170 VGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMG-IRPDVITYNSLITRLFHSGK 228
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
++ +L D I ++ +I ++ G E + +D +R ++ + +T
Sbjct: 229 WGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYD---EMIQRSVDPNIVT 285
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
++ L G +EA+KVL G + N ++ GYC + V +A IL +
Sbjct: 286 YNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMS 345
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G ++ + GY AG+ + + +S G PD +L L +
Sbjct: 346 HDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSC-----GVLPDIYTFNMLLDGLCE 400
Query: 430 EGSVQ 434
G ++
Sbjct: 401 HGKIE 405
>gi|297797974|ref|XP_002866871.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
gi|297312707|gb|EFH43130.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
Length = 561
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 41/252 (16%)
Query: 120 YFSNLKDDEKTYQ---TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLY 176
YF +K E+ TY LL + + + D+ + F+ + ++ T+N +M Y
Sbjct: 194 YFDKMKGMERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAY 253
Query: 177 SKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE-MESQPHIVL 235
K G +++ VLT M++ PD ++ + I+SYG + + E ME + M S+ L
Sbjct: 254 GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTL 313
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
T+ S Y KA +IDKA V KK + I Y +I +Y G+ S ++
Sbjct: 314 --PTFNSMIINYGKARMIDKAEWVFKKMNDMNYMPSFITYECMIMMYGYCGSVSRAREIF 371
Query: 296 DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
+ E ++E+VLK L NA++ YC N
Sbjct: 372 E-------------------------EVVDSERVLKASTL----------NAMLEVYCRN 396
Query: 356 GLVQNAEAILED 367
GL A+ + +
Sbjct: 397 GLYMEADKLFHN 408
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 10/189 (5%)
Query: 103 VQLDLIGRVHGFLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEM 160
V +D G+ F E F +L ++ T T+ +++ Y + R DKA F+KM +M
Sbjct: 283 VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM 342
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGM 220
S +TY ++ +Y G + ++ E+ + + Y R+ L
Sbjct: 343 NYMPSFITYECMIMMYGYCGSVSRAREIFEEVVDSERVLKASTLNAMLEVY-CRNGLYME 401
Query: 221 EIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGI--GYNFL 278
L S + D STY Y KA++ + ++KK E KDGI G ++L
Sbjct: 402 ADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEHVQILMKKME-----KDGIFSGQDYL 456
Query: 279 ISLYASLGN 287
+ + + N
Sbjct: 457 VRILKTGNN 465
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 134/291 (46%), Gaps = 21/291 (7%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
MKE GI L+ TYN ++ K+G + +V M + P +Y + + ++G R D
Sbjct: 276 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 335
Query: 217 LEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGI 273
+E + +LREME+ +P++ +Y +A D+A +L K E + D I
Sbjct: 336 VETVLWLLREMEAHGVKPNVY----SYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVI 391
Query: 274 GYNFLISLYASLGNKSEVLRL-WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
+ LI + G S+ + W ++K+ K D +T + L K G++ +++ V++
Sbjct: 392 THTVLIQVLCDAGRISDAKDVFWKMKKSDQK----PDRVTYITLLDKFGDNGDSQSVMEI 447
Query: 333 WE-LSGNSYDTRIP--NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
W + + Y+ + AVI C G V A + +++ +KG S+ + +G+
Sbjct: 448 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 507
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG-SVQDVEAF 439
A + + K +++ G KP+ ++ G G S++ ++ +
Sbjct: 508 ADRFGDALELFK-----HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 553
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 147/367 (40%), Gaps = 15/367 (4%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY 131
+R R EV D M R+ I A +G G SA +K+
Sbjct: 225 MRGHGRVGDMAEVFDVMQRQ-IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVL 283
Query: 132 Q--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
TY L+ V+ +AL +R M G+ S TY+ +M + K E V +L
Sbjct: 284 NAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLL 343
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHF 246
EM+A + P+ +SY ICI G + IL +ME++ P ++ T+
Sbjct: 344 REMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVI----THTVLIQV 399
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
A I A DV K ++ ++ D + Y L+ + G+ V+ +W+ K
Sbjct: 400 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDN 459
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y +++AL ++G EA ++ E + G + N++I G+ +A + +
Sbjct: 460 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 519
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ G + + Y +G++ + Q + ++ KG PD ++L
Sbjct: 520 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYE-----LMKSKGIVPDVVAGNAVLFG 574
Query: 427 LGDEGSV 433
L G +
Sbjct: 575 LAKSGRL 581
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 134/335 (40%), Gaps = 44/335 (13%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L+ +Q++ +A +K K G++L T YN ++C + + EMK
Sbjct: 851 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 910
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
PD F+Y + +++ G +E M + EM + Y S Y+ N I
Sbjct: 911 CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRK--------GYEST---YVTYNTI--I 957
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
S ++K RLEQ + YN + ++ T C Y +L+
Sbjct: 958 SGLVK--SRRLEQAIDLYYNLMSQGFSP---------------TPCT------YGPLLDG 994
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
L+K G E+AE + E G + I N ++ G+ G + + +D+V++G
Sbjct: 995 LLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 1054
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV 436
S+ ++ AG+ G + L + G +PD ++ LG +++
Sbjct: 1055 IKSYTIIIDTLCKAGQLNDGLTYFRQLLEM-----GLEPDLITYNLLIDGLGKSKRLEEA 1109
Query: 437 EAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVD 469
+ + + ++P N Y++ I + GK +
Sbjct: 1110 VSLFNEMQKKGIVP-NLYTYNSLILHLGKAGKAAE 1143
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 121/296 (40%), Gaps = 24/296 (8%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK-- 125
+I L + R +ALE+ D M +KGI Q + GFL A+ + L+
Sbjct: 466 VIDALCQVGRVFEALEMFDEMKQKGIV-------PEQYSYNSLISGFLKADRFGDALELF 518
Query: 126 ------DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
+ T+ +N Y + ++ KA+ + MK GI + N ++ +K+
Sbjct: 519 KHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 578
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWS 238
G+ V E+KA + PD +Y + I S E ++I +E+ + V D
Sbjct: 579 GRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN--NCVPDVL 636
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEE-RLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
S KA D+A + + +E LE DG YN L++ G EV+ L L
Sbjct: 637 AVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGT-YNTLLAGLGREGKVKEVMHL--L 693
Query: 298 EKTACKRYINR--DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
E+ Y Y T+L+ L K G +A +L G D N VI G
Sbjct: 694 EEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 749
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 169/439 (38%), Gaps = 59/439 (13%)
Query: 56 NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFL 115
+G K V IR L + KRF +A + M +G C H V + ++
Sbjct: 349 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG-CKPDVITHTVLIQVLCDAGRIS 407
Query: 116 SAESYFSNLK--DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A+ F +K D + TY LL+ + + + + MK G + + Y ++
Sbjct: 408 DAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVI 467
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
+ G+ + ++ EMK K I P+ +SY I+
Sbjct: 468 DALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG----------------------- 504
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
++KA+ A ++ K + + +G + I+ Y G + ++
Sbjct: 505 -------------FLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 551
Query: 294 LWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
++L K+ + I D + +L L K G A++V E + G S DT I ++I
Sbjct: 552 RYELMKS---KGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDT-ITYTMMI 607
Query: 351 GYCNNGL-VQNAEAILEDLVEKGKATTPNSWAV--VAAGYFDAGKTERGFQCMKAALSVY 407
C+ A I D++E P+ AV + + AG+ + ++ +
Sbjct: 608 KCCSKASKFDEAVKIFYDMIENN--CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMN 665
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGK 466
+E P ++L+ LG EG V++V + + + P N Y+ + +NG
Sbjct: 666 LE-----PTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGA 720
Query: 467 GVD--ELLDSMKADGIDED 483
D ++L SM G D
Sbjct: 721 VNDALDMLYSMTTKGCIPD 739
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 3/249 (1%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K E TY TY +++ V+ R+ ++A+ + + G + + TY ++ K G+ E
Sbjct: 944 KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIED 1003
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
++ EM + Y I +N + + E + + ++M Q I D +Y
Sbjct: 1004 AENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ-GINPDIKSYTIII 1062
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACK 303
KA ++ ++ E + D I YN LI E + L+ +++K
Sbjct: 1063 DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 1122
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ Y +++ L K G+ EA K+ +E G + NA+I GY +G +A A
Sbjct: 1123 PNL-YTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYA 1181
Query: 364 ILEDLVEKG 372
++ G
Sbjct: 1182 AYGRMIVGG 1190
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 158/404 (39%), Gaps = 21/404 (5%)
Query: 51 DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICV--FAPCDHAVQLDLI 108
D +++ G+K ++ + K+ +++E ++ + GI + F C L
Sbjct: 799 DYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHL--- 855
Query: 109 GRVHGFLSAESYFSNLKDDEKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
+ L A K + +T Y +L+ V + D A F +MKE+G
Sbjct: 856 CKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 915
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
TYN ++ K+ + E++ V EM K +Y I+ LE +
Sbjct: 916 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 975
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
+ SQ TY +KA I+ A ++ + E + + YN L++ + G
Sbjct: 976 LMSQGFSPTP-CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 1034
Query: 287 NKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
N +V L+ + + IN D Y +++ L K G+ + ++ G D
Sbjct: 1035 NTEKVCHLF---QDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 1091
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAA 403
N +I G + ++ A ++ ++ +KG ++ + AGK + +
Sbjct: 1092 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1151
Query: 404 LSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVI 447
L+ KGWKP+ +++ GS A+ A R ++
Sbjct: 1152 LT-----KGWKPNVFTYNALIRGYSVSGSTDS--AYAAYGRMIV 1188
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 165/390 (42%), Gaps = 17/390 (4%)
Query: 111 VHG-FLSAESYFSNLK---DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
+HG F + E + ++ D + Y ++ Y R+ + +A++ F +M S
Sbjct: 52 LHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSV 111
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
+YN IM + + G + + V MK I+PD +++ I + S+ +L
Sbjct: 112 QSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNN 171
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
M Q + +Y + + K N +A + + ++ D + +N LI + G
Sbjct: 172 MPGQG-CEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKG 230
Query: 287 NKSEVLRLWD--LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
N E +L+ +++ C + ++ L + G +EA ++L+ G + D
Sbjct: 231 NVQESEKLFSKVMKRGVCPNLFT--FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS 288
Query: 345 PNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
N +I G+C + + AE L +V G ++ + G+ AG + + ++ A+
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348
Query: 405 SVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA-FVAALRTVIPMNRQMYHAFIKANIR 463
KG+ PD +S+++ L ++G + A F A+ + +Y+ +K +
Sbjct: 349 F-----KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSK 403
Query: 464 NGKGVD--ELLDSMKADGIDEDEETKEILV 491
G + +L+ M G D T ++V
Sbjct: 404 QGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 108/268 (40%), Gaps = 14/268 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L+ +Q +AL + M E G + TYN ++ K G +L +
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
AK PD F++ I+ Y + +++ IL M S I D TY + + KA +
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG-ITPDVITYNTLLNGLCKARKL 512
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
D D K E+ + I YN LI + SE + L+ KT R + D +T+
Sbjct: 513 DNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT---RGLTPDIVTL 569
Query: 314 LEALMKLGEHEEAEK-------VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+ L + E +K + KE++ S Y T I N +I +C V AE +
Sbjct: 570 CTLICGLCSNGELDKAYELFVTIEKEYKFS---YSTAIFNIMINAFCEKLNVSMAEKLFH 626
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTE 394
+ A ++ V+ Y G +
Sbjct: 627 KMGGSDCAPDNYTYRVMIDSYCKTGNID 654
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 125/315 (39%), Gaps = 17/315 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y L+ + + + +A + KM G+ + TYN I+ + K G + +L +
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDA 347
Query: 193 KAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQ-PHIVLDWSTYASAAHFYIKA 250
K PD F+Y IN D+ M + ME H ++ ++T K
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLS---KQ 404
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRD 309
L+ +A ++K E D YN +++ +G S+ + D C I
Sbjct: 405 GLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI-FT 463
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ T+++ K ++A ++L G + D N ++ G C + N + ++
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523
Query: 370 EKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
EKG TPN ++ ++ + K + K ++ +G PD + +++ L
Sbjct: 524 EKG--CTPNIITYNILIESFCKDRKVSEAMELFKE-----MKTRGLTPDIVTLCTLICGL 576
Query: 428 GDEGSVQDV-EAFVA 441
G + E FV
Sbjct: 577 CSNGELDKAYELFVT 591
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 97/242 (40%), Gaps = 4/242 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ Y +QR DKA+ M GI +TYN ++ K + + V D M
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAM 522
Query: 193 KAKNIFPDNFSYRICINSYGA-RSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K P+ +Y I I S+ R E ME + +EM+++ + D T +
Sbjct: 523 LEKGCTPNIITYNILIESFCKDRKVSEAME-LFKEMKTRG-LTPDIVTLCTLICGLCSNG 580
Query: 252 LIDKASDVLKKAEERLEQKDGIG-YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+DKA ++ E+ + +N +I+ + N S +L+ + N Y
Sbjct: 581 ELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTY 640
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
M+++ K G + A L E G V+ C + A I+ +V+
Sbjct: 641 RVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQ 700
Query: 371 KG 372
G
Sbjct: 701 NG 702
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 132/297 (44%), Gaps = 9/297 (3%)
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
+ DKA+ +M+ + I + +TYN ++ Y + E +++ EM K PD SY
Sbjct: 219 RLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYY 278
Query: 206 ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
+ ++ + +++ +M +++ D TY + H K D+A + L++AEE
Sbjct: 279 TVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEE 338
Query: 266 RLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDYITMLEALMKLGEH 323
R + D +GY+ ++ + G + + + K + Y +++ L + +
Sbjct: 339 RRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVT--YTSVINGLCQERKV 396
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
++A+K+L++ G +T A++ G C NG A ++ E +++V+
Sbjct: 397 DQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVL 456
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
G+ GK+ ++ + KG+ P P I ++ L E V + + F+
Sbjct: 457 MHGFRREGKSSEACDLVREMIK-----KGFFPTPVEINLLIQSLCQEEKVDEAKRFM 508
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 142/321 (44%), Gaps = 21/321 (6%)
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
SNL D+ TY T+ +L+ + D+AL R+ +E + + Y+ I+ + + G+
Sbjct: 304 SNLLPDQVTYNTFVHMLS---KHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 360
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWS 238
+K +++ EM +K PD +Y IN ++ + +LR+M +P+ V
Sbjct: 361 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTV---- 416
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
+Y + + K +A +++ +EE + I Y+ L+ + G SE DL
Sbjct: 417 SYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEA---CDLV 473
Query: 299 KTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
+ K+ + ++++L + + +EA++ +++ +G + + VI G+C
Sbjct: 474 REMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQK 533
Query: 356 GLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKP 415
++ A ++L+D+ K ++ + G+ E + L V G P
Sbjct: 534 DDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV-----GLIP 588
Query: 416 DPKVITSILSKLGDEGSVQDV 436
P +++ + G V+D+
Sbjct: 589 TPVTYRTVIHQYCRMGRVEDL 609
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 123/313 (39%), Gaps = 31/313 (9%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y A+L + + A R M + I + +M YS+ G+ VLT M
Sbjct: 136 VYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMM 195
Query: 193 KAKNIFPDNFSYRIC-----INSYGARSD-----LEGMEIILREMESQPHIVLDWSTYAS 242
+ I PD IC + G R D LE M+I+ E +P+++ TY
Sbjct: 196 QKAGIEPD---LSICNTAIHVLVMGNRLDKAVRFLERMQIV----EIEPNVI----TYNC 244
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
Y + ++ A +++ + + D I Y ++ EV L +EK
Sbjct: 245 LIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLL--MEKMLK 302
Query: 303 KRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
+ D Y T + L K G +EA + L+E E D +A++ +C G +
Sbjct: 303 DSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMD 362
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKV 419
A+ I+ ++ KG ++ V G K + Q K +Y G KP+
Sbjct: 363 KAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVD---QAKKMLRQMY--KHGCKPNTVS 417
Query: 420 ITSILSKLGDEGS 432
T++L+ L G+
Sbjct: 418 YTALLNGLCKNGN 430
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 23/235 (9%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ + R+ ++ +A R+M + G + + N L Q EKV + M
Sbjct: 452 TYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEIN---LLIQSLCQEEKVDEAKRFM 508
Query: 193 K-------AKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYAS 242
+ A N+ NF+ I+ + + DLE +L +M P +V TY +
Sbjct: 509 EQCLNNGCAVNVV--NFT--TVIHGFCQKDDLEAALSLLDDMYLSNKHPDVV----TYTT 560
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
K I++A+ + K + Y +I Y +G ++L+L LEK
Sbjct: 561 IIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKL--LEKMLS 618
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
++ Y ++E L G E+A K+L + + + D + +I Y + G+
Sbjct: 619 RQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGI 673
>gi|297843920|ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
gi|297335683|gb|EFH66100.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/410 (19%), Positives = 173/410 (42%), Gaps = 53/410 (12%)
Query: 60 VRVGELQRIIRDLRKRKRFSQALEVSDWMNRKG---ICVFAPCDHAVQLDLIGRVHGFLS 116
++V +L I+RD R+ +++ DWM + G + ++ C V + +
Sbjct: 97 LKVQDLNVILRDFGISGRWQDLIQLFDWMQQHGKISVSTYSSCIKFVGAKNVSK------ 150
Query: 117 AESYFSNLKDDEKTYQTY--GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM- 173
A + ++ D+ Y ++L+C V+ + D + F +MK G+ +TYN ++
Sbjct: 151 ALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRGGLKPDVITYNTLLA 210
Query: 174 -CLYSKTG----------------------------------QYEKVPDVLTEMKAKNIF 198
C+ K G + E+ + + +MKA+
Sbjct: 211 GCIKVKNGYPKAVELIGELPHNGIQMDSVMYGTVLAICASNGRCEEAENFIQQMKAEGHS 270
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
P+ + Y +NSY + D + + ++ EM+S +V + + YIK L D++ +
Sbjct: 271 PNIYHYSSLLNSYSWKGDYKKADELMTEMKSIG-LVPNKVMMTTLLKVYIKGGLFDRSRE 329
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALM 318
+L + E ++ + Y L+ + G E ++D K + M+ AL
Sbjct: 330 LLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVKSDGYANSIMISALC 389
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
+ EEA+++ ++ E + D + N ++ YC G +++ +++ + E+ N
Sbjct: 390 RSKRFEEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAIIPDYN 449
Query: 379 SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
++ ++ YF K + ++ + KG + + ++ +S++ LG
Sbjct: 450 TFHILIK-YFIKEK----LHLLAYQTTLDMHSKGHRLEEELCSSLIYHLG 494
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 152/359 (42%), Gaps = 18/359 (5%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
+ T TY L++CY R + D L+ ++ + G+ +Y+ I + K G+ +K
Sbjct: 170 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDK 228
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
+ EM + + P I +++ E I+++M I D TY+
Sbjct: 229 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS-GIAPDLFTYSLII 287
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K+ +DKA VL++ E + + I YN LI Y+ G +E +R++ + ++C
Sbjct: 288 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK-QMSSCGV 346
Query: 305 YINRDYI-TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY--CNNGLVQNA 361
D + + AL K G EA+ + L G D + ++ GY + + +
Sbjct: 347 IPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADV 406
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKV 419
I ++ KG A + + ++ Y G M A+ ++ ++ KG PD
Sbjct: 407 HNIFNLMLTKGIAPNKHVFNILINAYARCGM-------MDKAMLIFEDMQNKGMIPDTVT 459
Query: 420 ITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGV--DELLDSM 475
+++S L G + D + F + +P + +Y I+ +G+ V EL+ M
Sbjct: 460 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 518
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 121/283 (42%), Gaps = 5/283 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +L+ Y ++A + M +GI + Y ++ Y K G+ + V +M
Sbjct: 565 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 624
Query: 193 KAKNIFPDNFSYRICINS-YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K + P + Y I ++ + AR ++ +ES + + TY + N
Sbjct: 625 LHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSI--HTYGVVLGGLCRNN 682
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
D+A+ +L+K + D I +N +IS +G + E L+D T + Y
Sbjct: 683 CTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYS 742
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
M+ L+K +EEA+ + E SG++ D+R+ N ++ N V A L + E
Sbjct: 743 MMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 802
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
++ +++A+ + GK + + A + EG W+
Sbjct: 803 NLTLEASTISLLASLFSREGKYREHIKLLPAKYQ-FFEG-AWQ 843
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 113/275 (41%), Gaps = 8/275 (2%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSH--FRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
LK + +Y +L+ Y + A H F M GIA + +N ++ Y++ G
Sbjct: 378 LKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGM 437
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS--T 239
+K + +M+ K + PD ++ I+S L+ L + I + S
Sbjct: 438 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA---LHKFNHMVDIGVPPSEAV 494
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY-NFLISLYASLGNKSEVLRLWDLE 298
Y + KA +++ + + G+ Y + +I+ G +E + D+
Sbjct: 495 YGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMM 554
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
+R + +++E +G EEA +L G + I ++ GYC NG +
Sbjct: 555 VQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRI 614
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
+A + D++ KG T ++++ G F A +T
Sbjct: 615 DDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRT 649
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/346 (18%), Positives = 143/346 (41%), Gaps = 16/346 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ + + DKA +M E G +++TYN ++ YS +G + + V +M
Sbjct: 282 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 341
Query: 193 KAKNIFP--DNF-SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ + P DN S+ + +G ++ + + + +P I+ +Y++ H Y
Sbjct: 342 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDII----SYSTMLHGYAT 397
Query: 250 A--NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
A + + ++ + + +N LI+ YA G + + +++ +
Sbjct: 398 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 457
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG-LVQNAEAILE 366
+ T++ +L ++G ++A G + +I G CN+G LV+ E I E
Sbjct: 458 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 517
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ + ++ + G+ G M + G +P+ S++
Sbjct: 518 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT-----GQRPNVVTFNSLMEG 572
Query: 427 LGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVDEL 471
G++++ A + A+ ++ I N +Y + +NG+ D L
Sbjct: 573 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 618
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/395 (19%), Positives = 168/395 (42%), Gaps = 21/395 (5%)
Query: 12 QIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKN-GNKVRVGELQRIIR 70
H+ V ++ + ++++ TL + + +G TR +L +++ + V II
Sbjct: 101 HFHDKVVAQGFQMDQVSYATLLNGLCKIGE--TRSALKLLRMIEDRSTRPNVVMYNTIID 158
Query: 71 DLRKRKRFSQALEVSDWMNRKGI---------CVFAPCDHAVQLDLIGRVHGFLSAESYF 121
L K K ++A ++ M+ +GI ++ C ++ G ++ +
Sbjct: 159 GLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMI------ 212
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
LK+ TY L++ ++ + +A + M + G+ + ++YN +M Y G+
Sbjct: 213 --LKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGE 270
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
+ + M K + P+ +SY I I+ ++ +LRE+ + ++V + TY+
Sbjct: 271 VQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHK-NMVPNTVTYS 329
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
S + K I A D+LK+ R + D + Y L+ N + L+ K
Sbjct: 330 SLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKER 389
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
+ Y +++ L K G H+ A+K+ + + G + N +I G C G++ A
Sbjct: 390 GIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEA 449
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
A+ + E G ++ ++ F+ + ++
Sbjct: 450 LAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKA 484
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 17/274 (6%)
Query: 116 SAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
+A S F + K E T L+NC+ Q + + K+ ++G +T+T N +M
Sbjct: 28 TAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLM 87
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQ 230
G+ +K ++ A+ D SY +N + +LR +E ++
Sbjct: 88 KGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTR 147
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
P++V+ Y + K L+++A D+ + + R + I Y+ LI + G +
Sbjct: 148 PNVVM----YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAG---Q 200
Query: 291 VLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
++ + L + IN + Y +++AL K G+ +EA+ +L G + N
Sbjct: 201 LMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNT 260
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
++ GYC G VQNA+ + +V+KG PN ++
Sbjct: 261 LMDGYCLIGEVQNAKQMFHTMVQKG--VNPNVYS 292
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 122/334 (36%), Gaps = 56/334 (16%)
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
+ +N I+ K Y + +M+ K I PD F+ I IN +
Sbjct: 11 MEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCH------------- 57
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
L T++ VL K + Q + I N +L L
Sbjct: 58 --------LGQMTFSFT---------------VLGKILKLGYQPNTITLN---TLMKGLC 91
Query: 287 NKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
K EV + + D Y T+L L K+GE A K+L+ E +
Sbjct: 92 LKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVV 151
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAA 403
+ N +I G C + LV A + ++ +G +++ + G+ AG+ F +
Sbjct: 152 MYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEM 211
Query: 404 LSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR------TVIPMNRQMYHAF 457
+ K P+ T ++ L EG V++ + +A + V+ N M
Sbjct: 212 IL-----KNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYC 266
Query: 458 IKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
+ ++N K ++ +M G++ + + I++
Sbjct: 267 LIGEVQNAK---QMFHTMVQKGVNPNVYSYNIMI 297
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 167/426 (39%), Gaps = 58/426 (13%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAP---CDHAVQLDLIGRVHGFLSAESYFSNLKDDE 128
LR K++ + + W+ + F P C + + +D G+ + AES + L +
Sbjct: 72 LRLNKQWDAIVLICGWILYRS--SFHPDVIC-YNLLIDAYGQKSLYKKAESTYLELLEAR 128
Query: 129 --KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
T TY LL Y +KA + F +M++ G S + YN + K G +K
Sbjct: 129 CVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAV 188
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASA 243
++ MK P +Y + IN YG S + EM SQ P+I T+ +
Sbjct: 189 EIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNIC----TFTAL 244
Query: 244 AHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
+ + + L +KA ++ ++ +E + D YN L+ Y+ G ++ L +
Sbjct: 245 VNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGC 304
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
Y M++A + G HE+ A+A
Sbjct: 305 EPDRASYNIMVDAYGRAGLHED-----------------------------------AQA 329
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
+ E + G T S ++ + Y AGK + + + + G KPD V+ S+
Sbjct: 330 VFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQ-----MHKSGIKPDTFVLNSM 384
Query: 424 LSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGI 480
L+ G G + +E + A+ + P + Y+ I R G ++EL S+ A +
Sbjct: 385 LNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNL 444
Query: 481 DEDEET 486
D T
Sbjct: 445 IPDVVT 450
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 1/156 (0%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E +Y +++ Y R + A + F MK +GI + ++ ++ YS+ G+ K +
Sbjct: 305 EPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEE 364
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
++ +M I PD F +N YG E ME +L ME P+ D STY + Y
Sbjct: 365 IVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPA-DISTYNILINIY 423
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
+A + ++ + R D + + I Y+
Sbjct: 424 GRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYS 459
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 81 ALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK--DDEKTYQTYGALL 138
A E+ M G C + + +D GR A++ F +K T +++ LL
Sbjct: 292 AAEIFSLMQHMG-CEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLL 350
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
+ Y R + K +M + GI T N ++ LY + GQ+EK+ +VLT M+ K +
Sbjct: 351 SAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAME-KGPY 409
Query: 199 PDNFS-YRICINSYGARSDLEGMEIILREMESQPHI--VLDWSTYASA 243
P + S Y I IN YG ME + R + ++ I V+ W++ A
Sbjct: 410 PADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGA 457
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 4/221 (1%)
Query: 69 IRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE 128
I L K +A+E+ + M R C + + + ++L G+ A F ++ +
Sbjct: 175 IDGLMKGGDTQKAVEIFERMKRDR-CQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK 233
Query: 129 --KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
T+ AL+N + R+ +KA F +++E G+ YN +M YS+ G
Sbjct: 234 CKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAA 293
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
++ + M+ PD SY I +++YG R+ L + E+ + I ++
Sbjct: 294 EIFSLMQHMGCEPDRASYNIMVDAYG-RAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSA 352
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN 287
Y +A + K +++ + + + D N +++LY LG
Sbjct: 353 YSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQ 393
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 129/313 (41%), Gaps = 21/313 (6%)
Query: 178 KTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIV 234
K GQ + ++ EM+ K PD+F+Y I IN + LE ++ EM+++ P +V
Sbjct: 103 KKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVV 162
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE---V 291
TY + H + A +D A D+L + E R + + Y LI G V
Sbjct: 163 ----TYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILV 218
Query: 292 LRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
L+ L C + Y ++ L + G E + L E +SG + A+I G
Sbjct: 219 LKEMKLRGNECCPNV-VTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHG 277
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGK 411
C G A +L ++V G + + G G+ + + + + K
Sbjct: 278 LCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELD-----FAREMQILMVEK 332
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNGKG-- 467
G PD TS++ L D G + + + +R ++P N Y I + +
Sbjct: 333 GVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVP-NSVTYTTLINGFTQADRTDH 391
Query: 468 VDELLDSMKADGI 480
+L++ MK++G+
Sbjct: 392 ALQLVNEMKSNGL 404
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 124/295 (42%), Gaps = 8/295 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +N ++ Q +A+ FR+M+E G A + TYN ++ K Q E ++ EM
Sbjct: 93 SYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEM 152
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+A+ P +Y I+ + ++ IL EME + I + TY +
Sbjct: 153 QARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHR-GITPNTVTYTALIQGLCDCGE 211
Query: 253 IDKASDVLKKAEERLEQ--KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+++A VLK+ + R + + + Y LI G + D + N Y
Sbjct: 212 VERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATY 271
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
++ L + G EA +L E G D I N++I G C G + A + +VE
Sbjct: 272 TALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVE 331
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
KG A ++ + G DAG + M+ + KG P+ T++++
Sbjct: 332 KGVAPDVFTYTSLIQGLCDAGLLDEALGLMQE-----MRAKGIVPNSVTYTTLIN 381
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 119/272 (43%), Gaps = 11/272 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N + Q + +S +M+ G + + +TY ++ + G+ + D+L EM
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM-----ESQPHIVLDWSTYASAAHFY 247
+ + I P+ +Y I ++E ++L+EM E P++V TY H
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVV----TYTQLIHGL 243
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE-VLRLWDLEKTACKRYI 306
+ L + + L + + Y LI G+ E + L ++ C+ +
Sbjct: 244 CQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDV 303
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y ++++ L K+GE + A ++ G + D ++I G C+ GL+ A +++
Sbjct: 304 -VIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQ 362
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
++ KG ++ + G+ A +T+ Q
Sbjct: 363 EMRAKGIVPNSVTYTTLINGFTQADRTDHALQ 394
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 147/368 (39%), Gaps = 15/368 (4%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY A+++ ++ + A F +M+ MG+ +TYN ++ Y K G ++ +
Sbjct: 309 TVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLF 368
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+++ + P +Y I I+ Y DLE I+ EM Q + + TY +
Sbjct: 369 GDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQG-CLPNVCTYTILMKGSLN 427
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ A + + + Q D YN I LG ++ R +L + I+ D
Sbjct: 428 VCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILG---DIARALELREVLMLEGISSD 484
Query: 310 YIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+T ++ L K G ++A+++ + +G D +I +C GL++ A I
Sbjct: 485 TVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFN 544
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+++ G + ++ V+ Y G + + L +G +P+ ++
Sbjct: 545 NMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLE-----EGVEPNEITYNVLIHA 599
Query: 427 LGDEGSVQ-DVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDEL--LDSMKADGIDED 483
L G Q F L + N+ Y I N + G D + M +GI D
Sbjct: 600 LCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPD 659
Query: 484 EETKEILV 491
T + LV
Sbjct: 660 YLTHKALV 667
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 17/213 (7%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIAL--STLTYNDIMCLYSKTGQYEKV 185
E + TY LL+ ++++ + DK ++M+ G + +TYN ++ ++ G E+
Sbjct: 201 EPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEA 260
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYAS 242
+++ M+ +F+Y I AR ++ + + EME++ P +V TY +
Sbjct: 261 AELVEGMRLSKK-ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVV----TYNA 315
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQ--KDGIGYNFLISLYASLGNKSEVLRLW-DLEK 299
H +++ L++ A +K AE R D I YN L++ Y GN E L L+ DL +
Sbjct: 316 MIHGLLQSGLVEAAQ--VKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRR 373
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
+ Y ++ +LG+ EEA ++LKE
Sbjct: 374 AGLAPTV-LTYNIRIDGYCRLGDLEEA-RILKE 404
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 109/250 (43%), Gaps = 10/250 (4%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
LS FR+M G+A N ++ +++ + V EM I P +Y ++
Sbjct: 153 CLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLD 212
Query: 210 SYGARSDLEGMEIILREMESQPHIVL-DWSTYASAAHFYIKANLIDKASDVLKKAEERLE 268
S+ + + ++L+EME++ L + TY + +++A+++++ RL
Sbjct: 213 SFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM--RLS 270
Query: 269 QK-DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHE 324
+K YN LI+ L + V +++DL+ I +T M+ L++ G E
Sbjct: 271 KKASSFTYNPLIT---GLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVE 327
Query: 325 EAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
A+ E G D N+++ GYC G ++ A + DL G A T ++ +
Sbjct: 328 AAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRI 387
Query: 385 AGYFDAGKTE 394
GY G E
Sbjct: 388 DGYCRLGDLE 397
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 116 SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
SA +F + ++ E TY L++ R +T A HF +M E G+ + TY ++
Sbjct: 573 SAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLI 632
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY 211
K G +E EM I PD +++ + +
Sbjct: 633 DGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 124/301 (41%), Gaps = 7/301 (2%)
Query: 136 ALLNCYVRQRQTDKALSHFRK-MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
L+N YV Q +A S + M G TYN +M K G D++ EM
Sbjct: 359 TLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSR 418
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLID 254
+ P+ +Y I +N LE ++L EM ++ + ++ Y + +
Sbjct: 419 RGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSAR-GLTINSVIYNCLICALCRKEKVH 477
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITML 314
A ++L + + + D YN LI + E RL+ N Y T++
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537
Query: 315 EALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
AL++ G ++A ++ + G + D N +I +C G ++ + E ++ G
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLG 597
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
S ++ G GK + F+ ++ A++ +G+ PD S+L+ L G ++
Sbjct: 598 ADTISCNIMINGLCKVGKVDNAFEFLRDAIN-----RGFVPDIVTYNSVLNGLCKVGRIK 652
Query: 435 D 435
+
Sbjct: 653 E 653
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 157/407 (38%), Gaps = 31/407 (7%)
Query: 91 KGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKA 150
K +C+F D A L HG + + YQT L++ ++ Q +A
Sbjct: 226 KALCMFNEVDSACSLLRDMTKHGCVP----------NSIVYQT---LIHALSQKNQVSEA 272
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
L +M MG T+ND++ K + ++ M + +PDN +Y ++
Sbjct: 273 LKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHG 332
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLE-Q 269
L IL ++ + +L+ + + Y+ + + +A L + Q
Sbjct: 333 LCRIGKLNEARKILIKIPCPNNAILN-----TLINGYVMSGQLKEAQSFLNETMINFGFQ 387
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEK 328
D YN L+ G+ S L ++ + C+ + Y ++ L K G EEA
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNV-ITYAILVNGLCKAGLLEEAGL 446
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
VL E G + ++ I N +I C V A +L ++ KG ++ + G
Sbjct: 447 VLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLC 506
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVA-ALRTVI 447
+ + F+ L G + +++ L G+ Q V L
Sbjct: 507 KVDRIDEAFRLFHNMLL-----DGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGC 561
Query: 448 PMNRQMYHAFIKANIRNG---KGVDELLDSMKADGIDEDEETKEILV 491
+++ Y+ IKA + G KG+ EL + M DG+ D + I++
Sbjct: 562 TLDKITYNGLIKAFCKVGNIEKGL-ELYEQMIMDGLGADTISCNIMI 607
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 124/319 (38%), Gaps = 55/319 (17%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E TY L+N + ++A +M G+ ++++ YN ++C + + +
Sbjct: 422 EPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALN 481
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS-----TYAS 242
+L+EM K PD F+Y I YG L ++ I +++LD + TY +
Sbjct: 482 LLSEMCTKGCKPDLFTYNSLI--YG----LCKVDRIDEAFRLFHNMLLDGAVANNVTYNT 535
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
H ++ KA ++ R D I YN LI + +GN + L L++
Sbjct: 536 LIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYE------ 589
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAE 362
+ + G DT N +I G C G V NA
Sbjct: 590 -----------------------------QMIMDGLGADTISCNIMINGLCKVGKVDNAF 620
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVI 420
L D + +G ++ V G G+ +K AL+++ ++ +G +PD
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLCKVGR-------IKEALNLFDRLQVEGVRPDAFTY 673
Query: 421 TSILSKLGDEGSVQDVEAF 439
+ +S EG V D +F
Sbjct: 674 NTFISWQCKEGMVNDACSF 692
>gi|410110069|gb|AFV61114.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
lycioides]
Length = 429
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 182/437 (41%), Gaps = 79/437 (18%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRV-GEL---QRIIRDLRKRKRFSQALE 83
++ T ++I+ G G + L +W++ + RV G+L +I RK +S+A+
Sbjct: 10 DRYTYSTLITHFGKEGL-FDAAL-SWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 67
Query: 84 VSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT--YGALLN 139
+ + R G F P + +++ G+ F A S S ++ T Y LL
Sbjct: 68 IFSRLKRSG---FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLT 124
Query: 140 CYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP 199
YV ++ +ALS F +M+E+ L T N ++ +Y + G ++ + M+ I P
Sbjct: 125 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 184
Query: 200 DNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
+ SY + YG ++L G I L + + +IV + TY S Y K +KA+++
Sbjct: 185 NVVSYNTLLRVYG-DAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNL 243
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
+++ + R + + I Y+ +IS++ K
Sbjct: 244 IQEMQNRGIEPNSITYSTIISIWG-----------------------------------K 268
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
+G+ + A + ++ SG D + +I+ Y GLV +A+ +L +L K P
Sbjct: 269 VGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHEL--KSPDNIPRD 326
Query: 380 WAV-VAAG-------------YFDAGKTE--RGFQCMKAALSVY------------VEGK 411
A+ + AG DAG+ + F+ M S Y + G
Sbjct: 327 TAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGL 386
Query: 412 GWKPDPKVITSILSKLG 428
G+ PD VI +L+ G
Sbjct: 387 GYFPDSNVIALVLNAYG 403
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 154/364 (42%), Gaps = 18/364 (4%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E + TY +LLN + ++ + +A+ F+ M E G +TY+ I+ KTG+ + +
Sbjct: 75 EPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALE 134
Query: 188 VL-TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
+L +M + + +Y IN ++E +L EM S+ + V D TY +
Sbjct: 135 MLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY-VPDNITYNTILSG 193
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
+ + +A R D + YN L+ G E ++L+ + K Y+
Sbjct: 194 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLF--KDVIAKGYM 251
Query: 307 --NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
Y ++L L + +EAE++ K+ SG + + + V+ G+C V +A +
Sbjct: 252 PDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKV 311
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
LE++ + G ++ ++ G ++ + S V+ G PD + +L
Sbjct: 312 LEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHE----LFSTMVD-NGCAPDIVSYSVVL 366
Query: 425 SKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADG 479
+ L V D + R ++P + ++ + + GK +DE LLD M G
Sbjct: 367 NGLCKTNKVHDARVLFDRMIERKLVP-DVVTFNILMDGLCKAGK-LDEAKDLLDQMTCSG 424
Query: 480 IDED 483
D
Sbjct: 425 CAPD 428
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 147/340 (43%), Gaps = 33/340 (9%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L++ Y ++ + D+A + +M +G+ S TYN ++ + K + ++ ++ M
Sbjct: 46 YNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMA 105
Query: 194 AKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD +Y I+ + E +E++ +M + + Y + + K
Sbjct: 106 EKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIER-GCSANTVAYNALINGLCKDEN 164
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
I++A +L++ + D I YN ++S +G SE + +D + R + D
Sbjct: 165 IERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFD---SMPSRGYSPDVVA 221
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +L+AL K G+ +EA K+ K+ G DT N++++G + AE + + +V
Sbjct: 222 YNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV 281
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT-------- 421
G A ++++V +G+ A K + + ++ + G PD V+T
Sbjct: 282 ASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKI-----GAVPD--VVTYNILLDGL 334
Query: 422 ----------SILSKLGDEGSVQDVEAFVAALRTVIPMNR 451
+ S + D G D+ ++ L + N+
Sbjct: 335 CKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 374
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 158/376 (42%), Gaps = 18/376 (4%)
Query: 6 KLSTNTQIHNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGEL 65
K+ ++ + + + + + +T+ S + G +E ++ G
Sbjct: 93 KMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAY 152
Query: 66 QRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG--RVHGFLSAESYFSN 123
+I L K + +A ++ + M KG + P + L G R+ A+ +F +
Sbjct: 153 NALINGLCKDENIERAYKLLEEMASKG---YVPDNITYNTILSGLCRMGKVSEAKQFFDS 209
Query: 124 LKDDEKTYQ----TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
+ + Y Y LL+ ++ +TD+A+ F+ + G T+TYN I+ ++
Sbjct: 210 MP--SRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARK 267
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
++ ++ +M A P+ +Y I ++ + ++ +L EM S+ V D T
Sbjct: 268 SNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM-SKIGAVPDVVT 326
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
Y K NL+DKA ++ + D + Y+ +++ + L+D
Sbjct: 327 YNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFD--- 383
Query: 300 TACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
+R + D +T +++ L K G+ +EA+ +L + SG + D N ++ G G
Sbjct: 384 RMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQG 443
Query: 357 LVQNAEAILEDLVEKG 372
A+ + + + EKG
Sbjct: 444 RHIQADRLTQAMKEKG 459
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 156/366 (42%), Gaps = 32/366 (8%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +L + +Q + F +M + GI+ + YN ++ Y+K G+ ++ + EM
Sbjct: 10 TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69
Query: 193 KAKNIFPDNFSYRICINSYGARSDL-EGMEII--LREMESQPHIVLDWSTYASAAHFYIK 249
+ + P ++Y +N++ + + E ME+ + E +P +V TY++ K
Sbjct: 70 VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVV----TYSTIISGLCK 125
Query: 250 ANLIDKASDVL-KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI-- 306
+ +A ++L K ER + + YN LI+ N +L LE+ A K Y+
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKL--LEEMASKGYVPD 183
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
N Y T+L L ++G+ EA++ G S D N ++ G A + +
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243
Query: 367 DLVEKG---KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
D++ KG T NS + A + + E F+ M A+ G P+ + +
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS--------GCAPNGATYSIV 295
Query: 424 LS------KLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKA 477
LS K+ D V + + + A+ V+ N + K N+ + EL +M
Sbjct: 296 LSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYN-ILLDGLCKTNLVD--KAHELFSTMVD 352
Query: 478 DGIDED 483
+G D
Sbjct: 353 NGCAPD 358
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 152/359 (42%), Gaps = 18/359 (5%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
+ T TY L++CY R + D L+ ++ + G+ +Y+ I + K G+ +K
Sbjct: 8 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDK 66
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
+ EM + + P I +++ E I+++M I D TY+
Sbjct: 67 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS-GIAPDLFTYSLII 125
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K+ +DKA VL++ E + + I YN LI Y+ G +E +R++ + ++C
Sbjct: 126 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK-QMSSCGV 184
Query: 305 YINRDYI-TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY--CNNGLVQNA 361
D + + AL K G EA+ + L G D + ++ GY + + +
Sbjct: 185 IPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADV 244
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKV 419
I ++ KG A + + ++ Y G M A+ ++ ++ KG PD
Sbjct: 245 HNIFNLMLTKGIAPNKHVFNILINAYARCGM-------MDKAMLIFEDMQNKGMIPDTVT 297
Query: 420 ITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGV--DELLDSM 475
+++S L G + D + F + +P + +Y I+ +G+ V EL+ M
Sbjct: 298 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 356
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 120/277 (43%), Gaps = 3/277 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +L+ Y ++A + M +GI + Y ++ Y K G+ + V +M
Sbjct: 403 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 462
Query: 193 KAKNIFPDNFSYRICINS-YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K + P + Y I ++ + AR ++ +ES + + TY + N
Sbjct: 463 LHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIH--TYGVVLGGLCRNN 520
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
D+A+ +L+K + D I +N +IS +G + E L+D T + Y
Sbjct: 521 CTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYS 580
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
M+ L+K +EEA+ + E SG++ D+R+ N ++ N V A L + E
Sbjct: 581 MMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 640
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYV 408
++ +++A+ + GK + + A +++ V
Sbjct: 641 NLTLEASTISLLASLFSREGKYREHIKLLPANMTMAV 677
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 113/275 (41%), Gaps = 8/275 (2%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSH--FRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
LK + +Y +L+ Y + A H F M GIA + +N ++ Y++ G
Sbjct: 216 LKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGM 275
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS--T 239
+K + +M+ K + PD ++ I+S L+ L + I + S
Sbjct: 276 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA---LHKFNHMVDIGVPPSEAV 332
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY-NFLISLYASLGNKSEVLRLWDLE 298
Y + KA +++ + + G+ Y + +I+ G +E + D+
Sbjct: 333 YGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMM 392
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
+R + +++E +G EEA +L G + I ++ GYC NG +
Sbjct: 393 VQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRI 452
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
+A + D++ KG T ++++ G F A +T
Sbjct: 453 DDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRT 487
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 65/346 (18%), Positives = 146/346 (42%), Gaps = 16/346 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ + + DKA +M E G +++TYN ++ YS +G + + V +M
Sbjct: 120 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 179
Query: 193 KAKNIFP--DNF-SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ + P DN S+ + +G ++ + + + +P I+ +Y++ H Y
Sbjct: 180 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDII----SYSTMLHGYAT 235
Query: 250 A--NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
A + + ++ + + +N LI+ YA G + + +++ +
Sbjct: 236 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 295
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG-LVQNAEAILE 366
+ T++ +L ++G ++A G + +I G CN+G LV+ E I E
Sbjct: 296 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 355
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ + ++ + G+ G K + + V+ G +P+ S++
Sbjct: 356 MMNKDIPPPGVKYFSSIINNLCKEGRVAEG----KDIMDMMVQ-TGQRPNVVTFNSLMEG 410
Query: 427 LGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVDEL 471
G++++ A + A+ ++ I N +Y + +NG+ D L
Sbjct: 411 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 456
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 141/315 (44%), Gaps = 13/315 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++N + + D A+ +M + G A + +YN ++ + K + E +L +M
Sbjct: 46 TYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQM 105
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+ PD SY IN ++ ++ +M QP+++ TY + + +
Sbjct: 106 VMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVI----TYGTLVDGFCR 161
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINR 308
+D A ++++K ER + + I YN ++ S L+L+ ++E++
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y T++++L+K G+ ++A ++++ G S + ++++ G C G + A A+L+ +
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
G + ++ + G+ G+ + + L V+G G +P+ T +L
Sbjct: 282 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYH----LLEEMVDG-GCQPNVVTYTVLLDAFC 336
Query: 429 DEGSVQDVEAFVAAL 443
G +D V +
Sbjct: 337 KCGKAEDAIGLVEVM 351
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 128/297 (43%), Gaps = 15/297 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +L+ + + + + AL +M G ++Y ++ K Q ++ V+ +M
Sbjct: 81 SYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM 140
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
+ P+ +Y ++ + DL+G ++R+M + P+ + TY + H
Sbjct: 141 IQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAI----TYNNIMHGLCS 196
Query: 250 ANLIDKASDVLKKAEERLE-QKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYIN 307
+D A + K+ EE D Y+ ++ G + RL + + C +
Sbjct: 197 GRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNV- 255
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y ++L L K G+ +EA +L+ SG S + N +I G+C G + A +LE+
Sbjct: 256 VTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEE 315
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+V+ G ++ V+ + GK E + V VE KG+ P+ S+L
Sbjct: 316 MVDGGCQPNVVTYTVLLDAFCKCGKAEDAI----GLVEVMVE-KGYVPNLFTYNSLL 367
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 146/364 (40%), Gaps = 12/364 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LL+ + + + + A+ M E G + TYN ++ ++ K + E+ +L+ M
Sbjct: 327 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 386
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K P+ SY I + + ++L +M S + V D T+ + K
Sbjct: 387 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN-NCVPDIVTFNTIIDAMCKTYR 445
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLIS--LYASLGNKSEVLRLWDLEKTACKRYINRDY 310
+D A ++ +E + + YN L+ + +++E L K C I Y
Sbjct: 446 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI-ITY 504
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T+++ L K + A K+ + G + D + VI C + A +LE +++
Sbjct: 505 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 564
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G ++ + G+ G ++ + ++ LS KG PD + + L
Sbjct: 565 NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS-----KGSYPDVVTFSIFIDWLSKR 619
Query: 431 GSV-QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETK 487
G + Q E LR + + Y+ +K + D +L + M+ G + D T
Sbjct: 620 GRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATY 679
Query: 488 EILV 491
LV
Sbjct: 680 TTLV 683
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 165/398 (41%), Gaps = 46/398 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG L+N + T A+ R M + + + YN I+ K Q + ++ +EM
Sbjct: 257 TYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEM 316
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
K I PD F+Y I++ + + + +L EM + P++V+ +ST A K
Sbjct: 317 ITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV-FSTVVDA---LCK 372
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINR 308
+I A DV+ +R + D + Y L+ + E ++++D + C + R
Sbjct: 373 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV-R 431
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ ++ ++A +L++ L G DT N +I G C+ G +Q+A A+ ++
Sbjct: 432 SYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM 491
Query: 369 VEKGKATTPNSWAV--------------------VAAGYFDA----------GKTERGFQ 398
V G+ ++ + + DA G G
Sbjct: 492 VASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE- 550
Query: 399 CMKAALSVY--VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYH 455
++AA ++ + KG +PD + ++ L G + + + + +Y+
Sbjct: 551 -LEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYN 609
Query: 456 AFIKANIRNGK--GVDELLDSMKADGIDEDEETKEILV 491
I+ +R+ + G +LL M A+G D T ++V
Sbjct: 610 TIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIV 647
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 3/234 (1%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
++Y L+N Y + ++ DKA+ +M G+ T+TYN ++ G+ + + E
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M A PD +YRI ++ L ++L+ +E ++ D Y A +A
Sbjct: 491 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS-NLDADILVYNIAIDGMCRAG 549
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDY 310
++ A D+ + Q D YN +I G E +L+ +++ C R Y
Sbjct: 550 ELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRD-GCIY 608
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
T++ ++ E A ++L+E G S D ++ ++GL Q+ E +
Sbjct: 609 NTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFERL 662
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 1/264 (0%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E TY AL++ + + + D+A+ F M G + +YN ++ Y + + +K
Sbjct: 392 EPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMG 451
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
+L +M + + D +Y I+ L+ + EM + I D TY +
Sbjct: 452 LLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP-DLVTYRILLDYL 510
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
K + + +A +LK E D + YN I G L+ + +
Sbjct: 511 CKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDV 570
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
R Y M+ L K G +EA K+ ++ + +G S D I N +I G+ + A +L++
Sbjct: 571 RTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQE 630
Query: 368 LVEKGKATTPNSWAVVAAGYFDAG 391
++ +G + ++ ++ D G
Sbjct: 631 MLAEGFSADVSTTTLIVEMLSDDG 654
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 14/281 (4%)
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
D ALS F +M M ST+ + ++ +K Y V + T+M + I PD ++ I
Sbjct: 132 DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNIL 191
Query: 208 INSYGARSDLE-GMEII--LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE 264
INS+ L ++ L ++ QP D +T+ + I +A + K
Sbjct: 192 INSFCHLRRLGYAFSVLAKLLKLGCQP----DNTTFNTLIRGLCVEGKIGEALHLFDKTI 247
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEH 323
Q D + Y L++ +GN S +RL + + C+ + Y T++++L K +
Sbjct: 248 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIA-YNTIIDSLCKDRQV 306
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
EA + E G S D N++I CN ++ +L ++V PN VV
Sbjct: 307 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN--SKIMPN--VVV 362
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+ DA E + + ++ +G +PD T+++
Sbjct: 363 FSTVVDALCKEGMIAIAHDVVDMMIK-RGVEPDVVTYTALM 402
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 130/295 (44%), Gaps = 10/295 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++++ Y Q++KA+ FRKM GI +TYN +M K G+ + + M
Sbjct: 79 TYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSM 138
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD +Y ++ Y ++ L M +L M Q + LD + Y K
Sbjct: 139 VKRGLKPDITTYGTLLHGYASKGALVEMHDLLALM-VQNGMQLDHHVFNILICAYTKQEK 197
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+D+ V K ++ + + Y +I LG + + ++ ++K + Y
Sbjct: 198 VDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVV--Y 255
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+++ AL + E+AE+++ E G + + N ++ C G V ++ + + L
Sbjct: 256 TSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGH 315
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
G +++ + GY AGK + + + +SV G KPD +++++
Sbjct: 316 IGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSV-----GLKPDSVTYSTLIN 365
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 154/369 (41%), Gaps = 27/369 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +++ ++ DKA + +M + ++ +TYN I+ SK ++ +VLT M
Sbjct: 13 SYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVM 72
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ P+ F+Y ++ Y + E I R+M S I D TY S + K
Sbjct: 73 ----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDG-IEPDVVTYNSLMDYLCKNGK 127
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+A + +R + D Y L+ YAS K ++ + DL + + D+
Sbjct: 128 CTEARKIFDSMVKRGLKPDITTYGTLLHGYAS---KGALVEMHDLLALMVQNGMQLDHHV 184
Query: 313 MLEALMKLGEHEEAEKV------LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+ + E+ ++V +++ L+ N+ + R VI G C G + +A E
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYR---TVIDGLCKLGRLDDAMLNFE 241
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY-VEGKGWKPDPKVITSILS 425
+++KG TPN VV A T ++ KA ++ + +G P+ +IL
Sbjct: 242 QMIDKG--LTPN--VVVYTSLIHALCTYDKWE--KAEELIFEILDQGINPNIVFFNTILD 295
Query: 426 KLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDE 482
L EG V + + L + + + Y I GK G +LL M + G+
Sbjct: 296 SLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKP 355
Query: 483 DEETKEILV 491
D T L+
Sbjct: 356 DSVTYSTLI 364
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 119/267 (44%), Gaps = 13/267 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG LL+ Y + + M + G+ L +N ++C Y+K + ++V V ++M
Sbjct: 149 TYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKM 208
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
+ + + P+ +YR I+ L+ + +M + P++V+ Y S H
Sbjct: 209 RQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVV----YTSLIHALCT 264
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ +KA +++ + ++ + + +N ++ G E +L+DL +N D
Sbjct: 265 YDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIG---VNPD 321
Query: 310 ---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y T+++ G+ + A K+L G D+ + +I GYC +++A A+ +
Sbjct: 322 VITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFK 381
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKT 393
++ G ++ ++ G F +T
Sbjct: 382 EMESNGVNPDIITYNIILHGLFRTRRT 408
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 129/333 (38%), Gaps = 21/333 (6%)
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
++YN I+ K G +K EM + + PD +Y I A S + M+ R
Sbjct: 11 VVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSII---AALSKAQAMD---R 64
Query: 226 EMESQPHIVL-DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
ME +V+ + TY S H Y + +KA + +K + D + YN L+
Sbjct: 65 AMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124
Query: 285 LGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
G +E +++D + KR + D Y T+L G E +L +G D
Sbjct: 125 NGKCTEARKIFD---SMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLD 181
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
+ N +I Y V + + ++G ++ V G G+ + +
Sbjct: 182 HHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFE 241
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV-AALRTVIPMNRQMYHAFIKA 460
+ KG P+ V TS++ L + E + L I N ++ + +
Sbjct: 242 QMID-----KGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDS 296
Query: 461 NIRNGKGVD--ELLDSMKADGIDEDEETKEILV 491
+ G+ ++ +L D + G++ D T L+
Sbjct: 297 LCKEGRVIESKKLFDLLGHIGVNPDVITYSTLI 329
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ +L+ ++ + ++ F + +G+ +TY+ ++ Y G+ + +LT M
Sbjct: 290 FNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMV 349
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKA 250
+ + PD+ +Y IN Y + +E + +EMES P I+ TY H +
Sbjct: 350 SVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDII----TYNIILHGLFRT 405
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
A ++ + E Q + YN ++ +A
Sbjct: 406 RRTAAAKELYARITESGTQLELSTYNIILMDFA 438
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y + D A+ M +G+ ++TY+ ++ Y K + E + EM
Sbjct: 324 TYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEM 383
Query: 193 KAKNIFPDNFSYRICINS-YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
++ + PD +Y I ++ + R E+ R ES L+ STY + K N
Sbjct: 384 ESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQ--LELSTYNIILMDFAKTN 441
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 119/269 (44%), Gaps = 1/269 (0%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T + Y +L++ Y R ++ALS RKMKE GI +S +TY+ I+ +SK G E
Sbjct: 344 TSRIYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWF 403
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
E K + + Y I ++ ++E E ++REME + I + Y + Y
Sbjct: 404 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEE-GIDAPIAIYHTMMDGYTM 462
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
K V K+ +E + Y LI+LY +G S+ L + + K ++ +
Sbjct: 463 VADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 522
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y M+ +KL + A V ++ G D + N +I +C G + A ++++
Sbjct: 523 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQ 582
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
+ T ++ + G+ +G R +
Sbjct: 583 KLRHRPTTRTFMPIINGFAKSGDMRRSLE 611
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 21/225 (9%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGF-------LSAESY 120
II K ++LEV D M R G CV P H + G V + E
Sbjct: 596 IINGFAKSGDMRRSLEVFDMMRRCG-CV--PTVHTFNALINGLVEKRQMEKAVEILDEMT 652
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+ + +E TY ++ Y T KA +F +++ G+ + TY ++ K+G
Sbjct: 653 LAGVSANE---HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSG 709
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ + V EM A+NI ++F Y I I+ + R D+ ++++M+ + + D TY
Sbjct: 710 RMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKE-GVKPDIHTY 768
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASL 285
S +I A KA D + +A + +E+ + +G I Y +L
Sbjct: 769 TS----FISA--CSKAGD-MNRATQTIEEMEALGVKPNIKTYTTL 806
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 152/359 (42%), Gaps = 18/359 (5%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
+ T TY L++CY R + D L+ ++ + G+ +Y+ I + K G+ +K
Sbjct: 150 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDK 208
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
+ EM + + P I +++ E I+++M I D TY+
Sbjct: 209 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS-GIAPDLFTYSLII 267
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K+ +DKA VL++ E + + I YN LI Y+ G +E +R++ + ++C
Sbjct: 268 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK-QMSSCGV 326
Query: 305 YINRDYI-TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY--CNNGLVQNA 361
D + + AL K G EA+ + L G D + ++ GY + + +
Sbjct: 327 IPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADV 386
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKV 419
I ++ KG A + + ++ Y G M A+ ++ ++ KG PD
Sbjct: 387 HNIFNLMLTKGIAPNKHVFNILINAYARCGM-------MDKAMLIFEDMQNKGMIPDTVT 439
Query: 420 ITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGV--DELLDSM 475
+++S L G + D + F + +P + +Y I+ +G+ V EL+ M
Sbjct: 440 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 498
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 117/278 (42%), Gaps = 3/278 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +L+ Y ++A + M +GI + Y ++ Y K G+ + V +M
Sbjct: 545 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 604
Query: 193 KAKNIFPDNFSYRICINS-YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K + P + Y I ++ + AR ++ +ES + + TY + N
Sbjct: 605 LHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIH--TYGVVLGGLCRNN 662
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
D+A+ +L+K + D I +N +IS +G + E L+D T + Y
Sbjct: 663 CTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYS 722
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
M+ L+K +EEA+ + E SG++ D+R+ N ++ N V A L + E
Sbjct: 723 MMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 782
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
++ +++A+ + G + F A +E
Sbjct: 783 NLTLEASTISLLASLFSREGMIKGLFGTAPAPAPALLE 820
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/341 (18%), Positives = 122/341 (35%), Gaps = 40/341 (11%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ L+N Y R DKA+ F M+ G+ T+T+ ++ + G+ +
Sbjct: 403 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 462
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M + P Y I +L + ++ EM ++ ++S + K
Sbjct: 463 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 522
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--------------- 296
+ + D++ + ++ + + +N L+ Y +GN E L D
Sbjct: 523 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 582
Query: 297 -LEKTACKR-------YINRD------------YITMLEALMKLGEHEEAEKVLKEWELS 336
L CK + RD Y +L L + A+K+ E S
Sbjct: 583 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 642
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G + V+ G C N A +LE L ++ +V + F G+ +
Sbjct: 643 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 702
Query: 397 FQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
+ A+S Y G P+ + + +++ L E S ++ +
Sbjct: 703 KELFD-AISTY----GLVPNIQTYSMMITNLIKEESYEEAD 738
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 62/319 (19%), Positives = 124/319 (38%), Gaps = 47/319 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ + + DKA +M E G +++TYN ++ YS +G + + V +M
Sbjct: 262 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 321
Query: 193 --------------------------KAKNIF---------PDNFSYRICINSYGARSD- 216
+AK IF PD SY ++ Y +D
Sbjct: 322 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 381
Query: 217 -LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
L + I M ++ I + + + Y + ++DKA + + + + D + +
Sbjct: 382 CLADVHNIFNLMLTK-GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 440
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL----- 330
+IS +G + L ++ Y +++ GE +A++++
Sbjct: 441 ATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN 500
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
K+ G Y + I N + C G V + I++ +V+ G+ ++ + GY
Sbjct: 501 KDIPPPGVKYFSSIINNL----CKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 556
Query: 391 GKTERGFQCMKAALSVYVE 409
G E F + A S+ +E
Sbjct: 557 GNMEEAFALLDAMASIGIE 575
>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
Length = 546
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 169/418 (40%), Gaps = 69/418 (16%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L+ + + KA S F K+K GIA + YN ++ LY K Y++ +L EMK
Sbjct: 98 FSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMK 157
Query: 194 AKNIFPDNFSYRICINSYG-ARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD SY I IN+Y ++ LE ++ L EM+++ I LD +T Y K +
Sbjct: 158 EAGLMPDTVSYTILINAYAESQKYLEAKQVFL-EMKTKG-IQLDVTTCNMMIDVYGKLEM 215
Query: 253 IDKASDVLKKAEERLE-QKDGIGYNFLISLYASLGNKSEVLRLW---------------- 295
+ A ++ + L Q++ + YN +I +Y SE ++
Sbjct: 216 VRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITY 275
Query: 296 ---------DLEKTACKRYINR-----------DYITMLEALMKLGEHEEAEKVLKEWEL 335
L+ R + + Y T++ K G+++ A + K
Sbjct: 276 NTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLRE 335
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL-----------------VEKGKATTPN 378
G D + ++I+ Y GLV +A+ +LE+L EK +
Sbjct: 336 KGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAKAEKLEEAAKL 395
Query: 379 SWAVVAAGYFDAGKTERGFQCM-------KAALSVY--VEGKGWKPDPKVITSILSKLGD 429
W AG T + + K A+ V+ + G+ PD + +L+ G
Sbjct: 396 YWRSHEAGEIKESVTYKSMIQLFMRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQ 455
Query: 430 EGSVQDVEAFVAALRTV-IPMNRQMYHAFIK--ANIRNGKGVDELLDSMKADGIDEDE 484
++D E +R + ++++ +K + R + +++ ++K +G+D DE
Sbjct: 456 LRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDARKIREAEDMFAALKLEGLDGDE 513
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 153/374 (40%), Gaps = 52/374 (13%)
Query: 76 KRFSQALEVSDWMNRKGICV-FAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD---EKTY 131
+++ +A +V M KGI + C+ + +D+ G++ AE F ++ ++
Sbjct: 179 QKYLEAKQVFLEMKTKGIQLDVTTCN--MMIDVYGKLEMVRDAEELFWSMSKTLGIQQNV 236
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMK-EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
TY ++ Y +A + F M+ + G+ + +TYN I+ L+ T Q+EK ++
Sbjct: 237 VTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVR 296
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+M+ + I P+ +Y I+ YG K
Sbjct: 297 KMQQRGIEPNAVTYSTLISIYG------------------------------------KT 320
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
D+A+ + K E+ + D I Y +I +Y G + RL LE+ + RD
Sbjct: 321 GKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRL--LEELKQPDIVPRD- 377
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
T + L K + EEA K+ +G ++ ++I + N +NA + E++ E
Sbjct: 378 -TAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRSKNAIDVFENMRE 436
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G + V+ A Y + E L + + +G + +V +L GD
Sbjct: 437 SGFLPDSETTVVLLAAYGQLRQLEDA-----EKLYLDMRERGCTLEKEVHFQMLKLYGDA 491
Query: 431 GSVQDVEAFVAALR 444
+++ E AAL+
Sbjct: 492 RKIREAEDMFAALK 505
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 5/253 (1%)
Query: 120 YFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
Y N E TY +L + Q +KA+ RKM++ GI + +TY+ ++ +Y KT
Sbjct: 261 YMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKT 320
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
G+Y++ + ++ K D Y+ I Y R+ L L E QP IV
Sbjct: 321 GKYDRAAFLFKTLREKGFEMDEILYQSMIVVY-ERAGLVAHAKRLLEELKQPDIV----P 375
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
+A KA +++A+ + ++ E E K+ + Y +I L+ + +++ +
Sbjct: 376 RDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRSKNAIDVFENMR 435
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
+ + + +L A +L + E+AEK+ + G + + + ++ Y + ++
Sbjct: 436 ESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDARKIR 495
Query: 360 NAEAILEDLVEKG 372
AE + L +G
Sbjct: 496 EAEDMFAALKLEG 508
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 165/396 (41%), Gaps = 50/396 (12%)
Query: 78 FSQALEVSDWMNRKGICVFAPCDHA--VQLDLIGRVHGFLSAESYFSNL--KDDEKTYQT 133
+ ++L + DWM KG +AP A V L + R + AE + KD T
Sbjct: 5 WQRSLALHDWMIEKG--GYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFT 62
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L++ Y R + + A+ ++M+ GI + ++ ++ L K Y K + +++K
Sbjct: 63 FSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLK 122
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
A I PD Y IN YG + + +L EM+ + ++ D +Y + Y ++
Sbjct: 123 ASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMK-EAGLMPDTVSYTILINAYAESQKY 181
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-----LWDLEKTACKRYINR 308
+A V + + + Q D N +I +Y L E++R W + KT +
Sbjct: 182 LEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKL----EMVRDAEELFWSMSKTLGIQQNVV 237
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI---------PNAV---IIGYCNNG 356
Y TM+ KV KE EL +++ PN + I + +
Sbjct: 238 TYNTMI-------------KVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGL 284
Query: 357 LVQNAEA--ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
+Q+ +A ++ + ++G +++ + + Y GK +R A L + KG++
Sbjct: 285 TLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRA-----AFLFKTLREKGFE 339
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFVAALRT--VIP 448
D + S++ G V + + L+ ++P
Sbjct: 340 MDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVP 375
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ Y A ++ Y + +A F KE LS L +N ++ Y + +YEK ++
Sbjct: 481 ECYSANIDAYGERGHILEAEKAFLCCKE-SRKLSVLEFNVMIKAYGISNRYEKACQLIDS 539
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ + PD FSY I + + L +M+ + +V D Y + +IK
Sbjct: 540 MENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQ-ETQLVSDCIPYCAVISSFIKLG 598
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
++ A + K+ Q D + Y LI+ +A +GN E + + + A Y
Sbjct: 599 QLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYN 658
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++++ K+G EEA++ K + S D N +I Y +V+ AE I E L K
Sbjct: 659 SLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKRK 718
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
G A S+A++ Y GK + FQ ++
Sbjct: 719 GDANE-FSFAMMLCMYKRIGKLKEAFQIVQ 747
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 150/335 (44%), Gaps = 11/335 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +++ Q ++A S +KM+E+ T TYN ++ L++K ++ +M
Sbjct: 343 TFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKM 402
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PD SYR + ++ R + EI++ EM+ + + +D T ++ YI+A +
Sbjct: 403 KEARLEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERG-LEIDEFTQSALTRMYIEAGM 461
Query: 253 IDKASDVLKKAEERLE-QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+ K+ ++ LE Y+ I Y G+ E + + K + K + ++
Sbjct: 462 LKKSWLWFRRF--HLEGNMSSECYSANIDAYGERGHILEAEKAFLCCKESRKLSV-LEFN 518
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
M++A +E+A +++ E G D N++I + L A+ L + E
Sbjct: 519 VMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQET 578
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
+ + V + + G+ E M L + G +PD V +++ D G
Sbjct: 579 QLVSDCIPYCAVISSFIKLGQLE-----MAEGLFKEMIGYNVQPDVVVYGILINAFADVG 633
Query: 432 SVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG 465
+V++ +V ALR +PMN +Y++ IK + G
Sbjct: 634 NVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVG 668
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 149/351 (42%), Gaps = 20/351 (5%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT- 130
L+++ + +ALE+ +W+ +KG + + L ++G+ + ES + + T
Sbjct: 170 LKEQSCWERALEIFEWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITP 229
Query: 131 -YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV- 188
TYG L++ Y + T++AL +M + G+ +T ++ Y K G+++K
Sbjct: 230 VNSTYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFF 289
Query: 189 ----LTEMKAKNIFPDNFSYRICINSYGARSDL----EGMEIILREMESQPHIVLDWSTY 240
L ++ +++Y I++YG L + +LRE I+ + T+
Sbjct: 290 KNWSLESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLRE-----GIIPNTVTF 344
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
+ H +++A+ +++K EE D YN LISL+A N + K
Sbjct: 345 NTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKE 404
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
A Y T+L A EAE ++ E + G D +A+ Y G+++
Sbjct: 405 ARLEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKK 464
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAG---KTERGFQCMKAALSVYV 408
+ +G ++ A + A Y + G + E+ F C K + + V
Sbjct: 465 SWLWFRRFHLEGNMSSECYSANIDA-YGERGHILEAEKAFLCCKESRKLSV 514
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
YG L+N + +A+++ ++ G+ ++ + YN ++ LY+K G E+ + +
Sbjct: 621 VYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKML 680
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+A + PD +S I+ Y RS ++ E I ++ + + ++A Y +
Sbjct: 681 QASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKGDA--NEFSFAMMLCMYKRIGK 738
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
+ +A +++K E D + YN ++ YA G
Sbjct: 739 LKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDG 772
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 117 AESYFSNLKDDEKTYQTYGALLNC-YVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCL 175
AE F +LK + A++ C Y R + +A +KM+E+G+ L+YN+++
Sbjct: 708 AEEIFESLKRKGDANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGF 767
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
Y+ G+++ EM I PD+ +++
Sbjct: 768 YAMDGRFKDAVGTFKEMIEAAIQPDDCTFK 797
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 162/365 (44%), Gaps = 16/365 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T LLN ++ +KA +K E G+A + +N I+ Y + G K + +M
Sbjct: 359 TCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKM 418
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+A + P++ +Y + + ++E E +++M + ++ + TY + Y ++ L
Sbjct: 419 EAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKM-VEKGVLPNVETYNTLIDGYGRSCL 477
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN--KSEVLRLWDLEKTACKRYINRDY 310
D+ +L++ E++ + + I Y LI+ N ++EV+ L D+ + Y
Sbjct: 478 FDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVI-LGDMVHRGVVPNA-QIY 535
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+++ G+ ++A + E N +I G C G V AE + ++
Sbjct: 536 NMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITR 595
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKVITSILSKLG 428
KG + ++ + +GY AG ++ AL +Y ++ G KP +++ G
Sbjct: 596 KGLSFDVITYNSLISGYSSAGNVQK-------ALELYETMKKSGIKPTLNTYHRLIAGCG 648
Query: 429 DEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEET 486
EG V + + L+ + +R +Y+A I + +G + L +M+A GI D+ T
Sbjct: 649 KEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMT 708
Query: 487 KEILV 491
L+
Sbjct: 709 YNCLI 713
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 163/366 (44%), Gaps = 17/366 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y ++ ++++ A F +M + +A + +TYN ++ Y K GQ E+ ++ M
Sbjct: 219 VYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERM 278
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K +N+ P ++ +N +E + +L EME V D TY + ++K
Sbjct: 279 KVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVY-GFVPDRFTYTTLFDGHLKCGN 337
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN---KSEVLRLWDLEKTACKRYINRD 309
+D + + ++A + Q + L++ GN EVL+ + LE +
Sbjct: 338 VDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKF-LENGLAP--VGVF 394
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ T++ ++G+ +A +++ E G + N+++ +C ++ AE ++ +V
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMV 454
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
EKG ++ + GY + +R FQ ++ +E KG KP+ +++ L
Sbjct: 455 EKGVLPNVETYNTLIDGYGRSCLFDRCFQILEE-----MEKKGLKPNVISYGCLINCLCK 509
Query: 430 EGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEE 485
+ ++ + E + + R V+P N Q+Y+ I + GK D D M A I
Sbjct: 510 DANILEAEVILGDMVHRGVVP-NAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLV 568
Query: 486 TKEILV 491
T IL+
Sbjct: 569 TYNILI 574
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 152/367 (41%), Gaps = 55/367 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L+ + + ++A +KM E G+ + TYN ++ Y ++ +++ +L EM
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM 488
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ K + P+ SY IN +++ E+IL +M + +
Sbjct: 489 EKKGLKPNVISYGCLINCLCKDANILEAEVILGDM--------------------VHRGV 528
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A YN LI G + R +D E A R I +T
Sbjct: 529 VPNAQI----------------YNMLIDGSCIAGKLKDAFRFFD-EMVA--REIVPTLVT 569
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
++ L K G+ EAE + E G S+D N++I GY + G VQ A + E +
Sbjct: 570 YNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMK 629
Query: 370 EKGKATTPNSWAVVAAGYFDAG--KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ G T N++ + AG G E+ +Q M V PD + +++
Sbjct: 630 KSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLV--------PDRVIYNALIHCY 681
Query: 428 GDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDE 484
+ G VQ + +A+ I ++ Y+ I + + G+ V L++ MK G+
Sbjct: 682 VEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKT 741
Query: 485 ETKEILV 491
ET +IL+
Sbjct: 742 ETYDILI 748
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y AL++CYV KA S M+ GI +TYN ++ + K G+ KV +++ +MK
Sbjct: 674 YNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMK 733
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREM 227
+ + P +Y I I + D +G + REM
Sbjct: 734 IRGLIPKTETYDILIVGHCKLKDFDGAYVWYREM 767
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 2/244 (0%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY L+N ++ + +A + ++ G++ +TYN ++ YS G +K ++
Sbjct: 566 TLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELY 625
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
MK I P +Y I G + L +E I +EM Q ++V D Y + H Y++
Sbjct: 626 ETMKKSGIKPTLNTYHRLIAGCG-KEGLVLVEKIYQEM-LQMNLVPDRVIYNALIHCYVE 683
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ KA + E + Q D + YN LI + G +V L + K
Sbjct: 684 HGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTET 743
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ KL + + A +E +G + I + +I G G +A+ I ++
Sbjct: 744 YDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMN 803
Query: 370 EKGK 373
KGK
Sbjct: 804 MKGK 807
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 139/361 (38%), Gaps = 15/361 (4%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
LL+ + ++ + MK+ G+ S + N + T +YE + +E+
Sbjct: 118 LLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESG 177
Query: 197 IFPDNFSYRICINSYGARSDLE-GMEII--LREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ PD F Y I + DL+ +E++ ++ P + + Y K +
Sbjct: 178 LRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFV----YNVVIGGLCKEKRM 233
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
A + + +R + I YN LI Y +G E + + K + ++
Sbjct: 234 KDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSL 293
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
L L + EEA++VL+E E+ G D + G+ G V + + E+ V KG
Sbjct: 294 LNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGV 353
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
+ +++ G E+ + +K L G P +I++ G +
Sbjct: 354 QILDYTCSILLNALCKEGNMEKAEEVLKKFLE-----NGLAPVGVFFNTIVNGYCQVGDI 408
Query: 434 QDVEAFVAALRTV-IPMNRQMYHAFIK--ANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ + V + N Y++ +K ++N + ++ + M G+ + ET L
Sbjct: 409 NKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTL 468
Query: 491 V 491
+
Sbjct: 469 I 469
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 180/398 (45%), Gaps = 28/398 (7%)
Query: 108 IGRVHGFLSAESYFSNLKDDEKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
+ R+ F S S S ++++ + + A++N + + +A+ FRKMKE G +
Sbjct: 88 LTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPT 147
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEM-KAKNIFPDNFSYRICINSYGARSDLEGMEIIL 224
T T+N ++ + G+ + +L M + N+ P+ +Y I I ++ +++LE ++
Sbjct: 148 TSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVM 207
Query: 225 REMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE------RLEQKDGIGY 275
+M + QP IV TY + A + + D A ++ K ++ E+ GI
Sbjct: 208 HKMVNSGMQPDIV----TYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGI-- 261
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
+I Y GN +E LR K + ++++ + + + + E+ L E
Sbjct: 262 --IIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEE 319
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G D + ++ + ++GL+ N E I +D+V+ +++++A GY AG+ ++
Sbjct: 320 FGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDK 379
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMY 454
+ + +++ Y G + + + T+I+S G + + + P+N + Y
Sbjct: 380 A-EALLNSMTKY----GLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTY 434
Query: 455 HAFI--KANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
I + +ELL +M+ G+ + T E++
Sbjct: 435 ETLIWGYGEAKQPWKAEELLVTMEESGVAPEMSTIELV 472
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 163/362 (45%), Gaps = 30/362 (8%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L++ +R+ + +A++ F + E G + +TY ++ ++ ++ +P +L++++
Sbjct: 49 LMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENG 108
Query: 197 IFPDNFSYRICINSYGARSDL-EGMEII--LREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ PD+ + IN++ + E M+I ++E +P ST+ + + ++
Sbjct: 109 VKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTT----STFNTLIKGF---GIV 161
Query: 254 DKASDVLKKAEERLE----QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ + +K E ++ + + YN LI + + K+E+ W++ + D
Sbjct: 162 GRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCT---KNELEEAWNVMHKMVNSGMQPD 218
Query: 310 ---YITMLEALMKLGEHEEAEKVLKEWELSGNSY--DTRIPNAVIIGYCNNGLVQNAEAI 364
Y T+ A + GE + AE+++ + + N + R +I GYC G + A
Sbjct: 219 IVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRF 278
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
L + E G P + + GY D T+ ++ AL++ +E G KPD ++I+
Sbjct: 279 LYKMKELGVHPNPVVFNSLIKGYLDITDTDG----VEEALTL-MEEFGIKPDVVTYSTIM 333
Query: 425 SKLGDEGSVQDVEA-FVAALRTVIPMNRQMYHAFIKANIRNGKG--VDELLDSMKADGID 481
+ G + + E F ++ I + Q Y K +R G+ + LL+SM G+
Sbjct: 334 NAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQ 393
Query: 482 ED 483
+
Sbjct: 394 AN 395
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 138/325 (42%), Gaps = 26/325 (8%)
Query: 107 LIGRVH---GFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIA 163
++GR H L N+K +E+TY L+ + + + ++A + KM G+
Sbjct: 160 IVGRPHEAMKLLEMMIQDGNVKPNERTYNI---LIQAWCTKNELEEAWNVMHKMVNSGMQ 216
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN--IFPDNFSYRICINSYGARSDL-EGM 220
+TYN + +++ G+ + ++ +M+ N + P+ + I I Y ++ E +
Sbjct: 217 PDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEAL 276
Query: 221 EII--LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+ ++E+ P+ V+ + S Y+ D + L EE + D + Y+ +
Sbjct: 277 RFLYKMKELGVHPNPVV----FNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTI 332
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWEL 335
++ ++S G ++D K I D Y + + ++ G+ ++AE +L
Sbjct: 333 MNAWSSSGLMDNCEEIFD---DMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTK 389
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G + I +I G+C G + A + E + E G ++ + GY +A + +
Sbjct: 390 YGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWK 449
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVI 420
+ L V +E G P+ I
Sbjct: 450 AEE-----LLVTMEESGVAPEMSTI 469
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 128/302 (42%), Gaps = 12/302 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N ++ + D+A+ M G + +T+N I+ TG++ +LTEM
Sbjct: 53 TYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEM 112
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K P ++ I IN + R L G I + E + +Y H + K
Sbjct: 113 VRKGCSPSVVTFNILIN-FLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKK 171
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYI 311
+D+A L+ R D + YN +++ G + L + L C + Y
Sbjct: 172 MDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVL-ITYN 230
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T+++ L K+G+ ++A ++L E G D +++I G G V+ A D+ +
Sbjct: 231 TVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDV--E 288
Query: 372 GKATTPNSWAV--VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
G PN++ + G A +T+R + Y+ KG KP T ++ + +
Sbjct: 289 GFGVKPNAFTYNSIMFGLCKAQQTDRAIDFL-----AYMISKGCKPTEVSYTILIEGIAN 343
Query: 430 EG 431
EG
Sbjct: 344 EG 345
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 7/167 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L + + D A+ ++ G + +TYN ++ SK G+ ++ ++L EM
Sbjct: 193 TYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEM 252
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ K + PD +Y I +E ++E +P+ TY S K
Sbjct: 253 RGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAF----TYNSIMFGLCK 308
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
A D+A D L + + + Y LI A+ G E L L +
Sbjct: 309 AQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLN 355
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 126/291 (43%), Gaps = 6/291 (2%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L+ ++++ + A+ ++M+E GIA T YN ++ SK + ++ L EM
Sbjct: 458 YTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMV 517
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
PD F+Y I+ Y + + ++EM + ++ + + Y K +
Sbjct: 518 ENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM-LECGVIPNKVLCTGLINEYCKKGKV 576
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
+A + E+ D Y L++ G ++ ++ + Y T+
Sbjct: 577 IEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTL 636
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
++ KLG ++A + E +G + + I N ++ G+C +G ++ A+ +L+++ KG
Sbjct: 637 IDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGF 696
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
++ + GY +G FQ ++ KG PD V T+++
Sbjct: 697 PPNAVTYCTIIDGYCKSGDLAEAFQLFDE-----MKLKGLVPDSFVYTTLV 742
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 2/214 (0%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
L+N Y ++ + +A S FR M E GI TY +M K G+ ++ EM+ K
Sbjct: 565 GLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGK 624
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
I PD FSY I+ + +++ I EM Q + + Y + ++ I+K
Sbjct: 625 GIAPDVFSYGTLIDGFSKLGNMQKASSIFDEM-VQAGLTSNVIIYNMLLGGFCRSGEIEK 683
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLE 315
A ++L + + + + Y +I Y G+ +E +L+D K + Y T+++
Sbjct: 684 AKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVD 743
Query: 316 ALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+L + E A + + E G + + NA+I
Sbjct: 744 GCCRLNDVERAITIFETNE-KGCASSSAPFNALI 776
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 128/310 (41%), Gaps = 14/310 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG + D A + ++M G + + Y ++ + + ++ VL EM
Sbjct: 422 TYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEM 481
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + I PD F Y I ++ L EM + D TY + YI+A
Sbjct: 482 REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEM-VENGFKPDAFTYGAFISGYIEAGE 540
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
A +K+ E + + LI+ Y K +V+ ++ ++ I D
Sbjct: 541 FASADKYVKEMLECGVIPNKVLCTGLINEYC---KKGKVIEACSAFRSMVEQGILGDAKT 597
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ L+K G+ +AE++ E G + D +I G+ G +Q A +I +++V
Sbjct: 598 YTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMV 657
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+ G + + ++ G+ +G+ E+ + + + GKG+ P+ +I+
Sbjct: 658 QAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDE-----MSGKGFPPNAVTYCTIIDGYCK 712
Query: 430 EGSVQDVEAF 439
G + EAF
Sbjct: 713 SGDL--AEAF 720
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 130/314 (41%), Gaps = 10/314 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+YG L++ + + KA S F +M + G+ + + YN ++ + ++G+ EK ++L EM
Sbjct: 632 SYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEM 691
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K P+ +Y I+ Y DL + EM+ + +V D Y + + N
Sbjct: 692 SGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLK-GLVPDSFVYTTLVDGCCRLND 750
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL-----RLWDLEKTACKRYIN 307
+++A + + E+ +N LI+ G K+E+ RL D + +
Sbjct: 751 VERAITIFETNEKGCASSSA-PFNALINWVFKFG-KTELTTDMINRLMDGSFDKFGKPND 808
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP-NAVIIGYCNNGLVQNAEAILE 366
Y M++ L K G E A+++ + N T I +++ GY G ++ +
Sbjct: 809 VTYNIMIDYLCKEGNLEAAKELFHHMQ-KANLMPTVITYTSLLNGYDKMGRRSEMFSVFD 867
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+++ G ++V+ + G T + + + G K ++LS
Sbjct: 868 EVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSG 927
Query: 427 LGDEGSVQDVEAFV 440
G ++ E V
Sbjct: 928 FAKVGEMEVAEKVV 941
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 149/376 (39%), Gaps = 44/376 (11%)
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
D+AL + M G+ S +YN ++ K + E +L EM + +F DN +Y
Sbjct: 260 NVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYS 319
Query: 206 ICINSYGARSDLEGMEIILREMESQPH----IVLDW------------------------ 237
I I+ + + ++ EM S ++ D+
Sbjct: 320 ILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITF 379
Query: 238 ------STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
YAS + + + K ++L + ++R Y + S G+
Sbjct: 380 GVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGA 439
Query: 292 LRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
+ ++ + C+ + Y T+++ ++ +A +VLKE G + DT N++II
Sbjct: 440 YNIVKEMGASGCRPNV-VIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLII 498
Query: 351 GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG 410
G + A + L ++VE G ++ +GY +AG+ + +K L
Sbjct: 499 GLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLEC---- 554
Query: 411 KGWKPDPKVITSILSKLGDEGSV-QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD 469
G P+ + T ++++ +G V + AF + + I + + Y + ++NGK D
Sbjct: 555 -GVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVND 613
Query: 470 --ELLDSMKADGIDED 483
E+ M+ GI D
Sbjct: 614 AEEIFHEMRGKGIAPD 629
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 126/309 (40%), Gaps = 21/309 (6%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+TY L+N V+ + + A F +M+ GIA +Y ++ +SK G +K + E
Sbjct: 596 KTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDE 655
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYI 248
M + + Y + + + ++E + +L EM + P+ V TY + Y
Sbjct: 656 MVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAV----TYCTIIDGYC 711
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K+ + +A + + + + D Y L+ L + + +++ + C +
Sbjct: 712 KSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASS-SA 770
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDT-RIPNAV----IIGY-CNNGLVQNAE 362
+ ++ + K G+ E ++ L S+D PN V +I Y C G ++ A+
Sbjct: 771 PFNALINWVFKFGKTELTTDMIN--RLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAK 828
Query: 363 AILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS 422
+ + + T ++ + GY G+ F ++ G +PD + +
Sbjct: 829 ELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAA-----GIEPDNIMYSV 883
Query: 423 ILSKLGDEG 431
I++ EG
Sbjct: 884 IINAFLKEG 892
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 128/318 (40%), Gaps = 27/318 (8%)
Query: 31 TLYSIISPLGNPGTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNR 90
TL S LGN + D V+ G V ++ + +A E+ D M+
Sbjct: 635 TLIDGFSKLGNM-QKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSG 693
Query: 91 KGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLK-----DDEKTYQTYGALLNCYVR 143
KG F P + +D + A F +K D Y T L++ R
Sbjct: 694 KG---FPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTT---LVDGCCR 747
Query: 144 QRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI----FP 199
++A++ F + E G A S+ +N ++ K G+ E D++ + + P
Sbjct: 748 LNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKP 806
Query: 200 DNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
++ +Y I I+ +LE + + M+ + +++ TY S + Y K + V
Sbjct: 807 NDVTYNIMIDYLCKEGNLEAAKELFHHMQ-KANLMPTVITYTSLLNGYDKMGRRSEMFSV 865
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTA----CKRYINRDYITM 313
+ + D I Y+ +I+ + G ++ L L D K A CK I+ +
Sbjct: 866 FDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCR-AL 924
Query: 314 LEALMKLGEHEEAEKVLK 331
L K+GE E AEKV++
Sbjct: 925 LSGFAKVGEMEVAEKVVE 942
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 134/291 (46%), Gaps = 21/291 (7%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
MKE GI L+ TYN ++ K+G + +V M + P +Y + + ++G R D
Sbjct: 186 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 245
Query: 217 LEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGI 273
+E + +LREME+ +P++ +Y +A D+A +L K E + D I
Sbjct: 246 VETVLWLLREMEAHGVKPNVY----SYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVI 301
Query: 274 GYNFLISLYASLGNKSEVLRL-WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
+ LI + G S+ + W ++K+ K D +T + L K G++ +++ V++
Sbjct: 302 THTVLIQVLCDAGRISDAKDVFWKMKKSDQK----PDRVTYITLLDKFGDNGDSQSVMEI 357
Query: 333 WE-LSGNSYDTRIP--NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
W + + Y+ + AVI C G V A + +++ +KG S+ + +G+
Sbjct: 358 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 417
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG-SVQDVEAF 439
A + + K +++ G KP+ ++ G G S++ ++ +
Sbjct: 418 ADRFGDALELFK-----HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 463
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 146/365 (40%), Gaps = 15/365 (4%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY 131
+R R EV D M R+ I A +G G SA +K+
Sbjct: 135 MRGHGRVGDMAEVFDVMQRQ-IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVL 193
Query: 132 Q--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
TY L+ V+ +AL +R M G+ S TY+ +M + K E V +L
Sbjct: 194 NAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLL 253
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHF 246
EM+A + P+ +SY ICI G + IL +ME++ P ++ T+
Sbjct: 254 REMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVI----THTVLIQV 309
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
A I A DV K ++ ++ D + Y L+ + G+ V+ +W+ K
Sbjct: 310 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDN 369
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y +++AL ++G EA ++ E + G + N++I G+ +A + +
Sbjct: 370 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 429
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ G + + Y +G++ + Q + ++ KG PD ++L
Sbjct: 430 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYE-----LMKSKGIVPDVVAGNAVLFG 484
Query: 427 LGDEG 431
L G
Sbjct: 485 LAKSG 489
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 172/449 (38%), Gaps = 46/449 (10%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK-- 125
+I L + R +ALE+ D M +KGI Q + GFL A+ + L+
Sbjct: 376 VIDALCQVGRVFEALEMFDEMKQKGIV-------PEQYSYNSLISGFLKADRFGDALELF 428
Query: 126 ------DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
+ T+ +N Y + ++ KA+ + MK GI + N ++ +K+
Sbjct: 429 KHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 488
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
G+ V E+KA + PD +Y + I S + I +M + + V D
Sbjct: 489 GRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDM-IENNCVPDVLA 547
Query: 240 YASAAHFYIKANLIDKASDVLKKAEE-RLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
S KA D+A + + +E LE DG YN L++ G EV+ L LE
Sbjct: 548 VNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGT-YNTLLAGLGREGKVKEVMHL--LE 604
Query: 299 KTACKRYINR--DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
+ Y Y T+L+ L K G +A +L G D N VI G
Sbjct: 605 EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEE 664
Query: 357 LVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSV---YVEGK 411
A +I + K P+ + + + G MK AL + Y
Sbjct: 665 RYNEAFSI---FCQMKKVLIPDYATLCTILPSFVKIG-------LMKEALHIIKDYFLQP 714
Query: 412 GWKPD----PKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKG 467
G K D ++ IL K G E S++ E + + I ++ IK + K
Sbjct: 715 GSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIAS---SGITLDDFFLCPLIKHLCKQKKA 771
Query: 468 VD--ELLDSMKADGIDEDEETKEILVCTM 494
++ EL+ K+ G+ L+C +
Sbjct: 772 LEAHELVKKFKSFGVSLKTGLYNSLICGL 800
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 36/247 (14%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L+ +Q++ +A +K K G++L T YN ++C + + EMK
Sbjct: 761 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 820
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
PD F+Y + +++ G +E M + EM + Y S Y+ N I
Sbjct: 821 CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRK--------GYEST---YVTYNTI--I 867
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
S ++K RLEQ + YN + ++ T C Y +L+
Sbjct: 868 SGLVK--SRRLEQAIDLYYNLMSQGFSP---------------TPCT------YGPLLDG 904
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
L+K G E+AE + E G + I N ++ G+ G + + +D+V++G
Sbjct: 905 LLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 964
Query: 377 PNSWAVV 383
S+ ++
Sbjct: 965 IKSYTII 971
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 169/439 (38%), Gaps = 59/439 (13%)
Query: 56 NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFL 115
+G K V IR L + KRF +A + M +G C H V + ++
Sbjct: 259 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG-CKPDVITHTVLIQVLCDAGRIS 317
Query: 116 SAESYFSNLK--DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A+ F +K D + TY LL+ + + + + MK G + + Y ++
Sbjct: 318 DAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVI 377
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
+ G+ + ++ EMK K I P+ +SY I+
Sbjct: 378 DALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG----------------------- 414
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
++KA+ A ++ K + + +G + I+ Y G + ++
Sbjct: 415 -------------FLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 461
Query: 294 LWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
++L K+ + I D + +L L K G A++V E + G S DT I ++I
Sbjct: 462 RYELMKS---KGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDT-ITYTMMI 517
Query: 351 GYCNNGL-VQNAEAILEDLVEKGKATTPNSWAV--VAAGYFDAGKTERGFQCMKAALSVY 407
C+ A I D++E P+ AV + + AG+ + ++ +
Sbjct: 518 KCCSKASKFDEAVKIFYDMIENN--CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMN 575
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGK 466
+E P ++L+ LG EG V++V + + + P N Y+ + +NG
Sbjct: 576 LE-----PTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGA 630
Query: 467 GVD--ELLDSMKADGIDED 483
D ++L SM G D
Sbjct: 631 VNDALDMLYSMTTKGCIPD 649
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD-EKT 130
+ K R + L+V + M+RKG + + L+ + + Y++ + T
Sbjct: 835 MGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPT 894
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
TYG LL+ ++ + + A + F +M E G + YN ++ + G EKV +
Sbjct: 895 PCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQ 954
Query: 191 EMKAKNIFPDNFSYRICIN 209
+M + I PD SY I I+
Sbjct: 955 DMVDQGINPDIKSYTIIID 973
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 147/377 (38%), Gaps = 50/377 (13%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
AE +++D + Y ++++ Y + +K L F ++KE G S ++Y ++
Sbjct: 388 AEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLN 447
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
LY K G+ K + EM++ I +N +Y + IN + D I EM
Sbjct: 448 LYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM------- 500
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
+++ L Q D YN LI + +GN + +
Sbjct: 501 -------------LRSGL----------------QPDRAIYNLLIEAFCKMGNMDRAICI 531
Query: 295 WDLEKTACKRY--INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
LEK +R NR + ++E G+ + A L SG NA+I G
Sbjct: 532 --LEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL 589
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
VQ A ++L+ + G +++ ++ GY +G + F+ ++ G
Sbjct: 590 VRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK-----IKESG 644
Query: 413 WKPDPKVITSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGK--GVD 469
K D + ++L G +Q A + IP N +Y+ I R G +
Sbjct: 645 LKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAE 704
Query: 470 ELLDSMKADGIDEDEET 486
+L+ MK DG+ + T
Sbjct: 705 DLMKQMKEDGVPPNIHT 721
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 10/290 (3%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A + F N++ E + +L++ Y R ALS +MK G+ L+ +TY+ ++
Sbjct: 283 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILIS 342
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
++K + ++ E K K + Y I+++ ++E E ++REME + I
Sbjct: 343 GFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREME-EDGID 401
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
Y S H Y +K V ++ +E + I Y L++LY +G ++ L +
Sbjct: 402 APIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSI 461
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
++ ++ N+ Y ++ + L + A + +E SG D I N +I +C
Sbjct: 462 SKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCK 521
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
G + A ILE + ++ + ++ + GY AG MK+AL
Sbjct: 522 MGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD-------MKSAL 564
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 81 ALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT--YQTYGALL 138
AL+ D M R G CV + + + R H A S + T TY ++
Sbjct: 563 ALDTLDLMRRSG-CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 621
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
Y KA +F K+KE G+ L Y ++ K+G+ + V EM + I
Sbjct: 622 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 681
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
+ F Y I I+ + R D+ E ++++M+ + + + TY S YI N KA D
Sbjct: 682 RNTFIYNILIDGWARRGDVWEAEDLMKQMK-EDGVPPNIHTYTS----YI--NACCKAGD 734
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASL 285
+++AE+ +E+ +G + Y +L
Sbjct: 735 -MQRAEKVIEEMVDVGLKPNVKTYTTL 760
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 143/364 (39%), Gaps = 56/364 (15%)
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP 231
++ Y+K G M+A+ I P+ F + +++Y D+ G + EM+S+
Sbjct: 270 MIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSE- 328
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN---K 288
+ L TY+ + K N A ++ K+A+ +L +GI Y+ +I + GN
Sbjct: 329 GLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERA 388
Query: 289 SEVLRLWDLE---------------------KTACKRYINR-----------DYITMLEA 316
E++R + + + C R Y +L
Sbjct: 389 EELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNL 448
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
+K+G+ +A + KE E G ++ + + +I G+ + NA AI E+++ G
Sbjct: 449 YVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPD 508
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV 436
+ ++ + G +R ++ ++ + +P + I+ G ++
Sbjct: 509 RAIYNLLIEAFCKMGNMDRAICILEK-----MQKERMQPSNRAFRPIIEGYAVAGDMK-- 561
Query: 437 EAFVAALRTVIPMNRQ-------MYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETK 487
+AL T+ M R Y+A I +R K +LD M GI +E T
Sbjct: 562 ----SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTY 617
Query: 488 EILV 491
I++
Sbjct: 618 TIIM 621
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 19/235 (8%)
Query: 55 KNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCD---HAVQLDLIGRV 111
++G K+ V + ++R K R AL V+ M+ + I P + + + +D R
Sbjct: 642 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI----PRNTFIYNILIDGWARR 697
Query: 112 HGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
AE +K+D TY + +N + +A +M ++G+ + TY
Sbjct: 698 GDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTY 757
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR------SDLEGMEII 223
++ +++ ++ EMK + PD SY + S +R S G+ +
Sbjct: 758 TTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISV 817
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
REM S+ + +D T A H+ + I++ L +A +R+ D FL
Sbjct: 818 CREM-SENDLTVDLRT---AVHWSRWLHKIERTGGALTEALQRIFPPDWNSLEFL 868
>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 113/238 (47%), Gaps = 1/238 (0%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
M+ G + +TYN I+ K G+Y+ D++ M++K I D +Y + I+ +
Sbjct: 1 MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60
Query: 217 LEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
++L++M + I + TY + + +K I A+ V + + + YN
Sbjct: 61 SAKGYLLLKKMRKR-MIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYN 119
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
LI + GN + LRL D+ + R +Y +L L KL + + A+ +++ +S
Sbjct: 120 ILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMS 179
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G R A+I G C +GL+ + +L+ + + G + +++V+ G+ AGK +
Sbjct: 180 GMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIK 237
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/438 (20%), Positives = 181/438 (41%), Gaps = 32/438 (7%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQ- 132
K+ R+ A ++ D M KGI C + + +D + + + SA+ Y K ++
Sbjct: 22 KKGRYKAASDLIDRMESKGIEADV-CTYNMLIDDLCKNNR--SAKGYLLLKKMRKRMIAP 78
Query: 133 ---TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
TY L+N +++R+ A F +M + ++ + +TYN ++ + G +E+ +L
Sbjct: 79 NEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLL 138
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME--SQPHIVLDWSTYASAAHFY 247
M+AK + PD +Y ++ S L +I ME +V+ + Y +
Sbjct: 139 DVMEAKGLRPDEVNYGALLSGL---SKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGL 195
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY-- 305
K L+D++ +L + D I ++ LI+ + G ++ + ++ CK +
Sbjct: 196 CKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAG------KIKNAKEVICKMFKA 249
Query: 306 -INRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
+ +Y+ T++ K G+ EA + +G+ D I N +I C G V A
Sbjct: 250 GLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEA 309
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
E + + A ++ + GY G + F + + G P
Sbjct: 310 EDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKL-----GHCPSHFTYG 364
Query: 422 SILSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVD--ELLDSMKAD 478
S+L L G++++ + + L + ++ +Y+ + + GK D L M
Sbjct: 365 SLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQF 424
Query: 479 GIDEDEETKEILVCTMEK 496
+ D T I++ + +
Sbjct: 425 NVLPDSHTYAIILAGLSR 442
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 152/401 (37%), Gaps = 49/401 (12%)
Query: 16 AVFSRFYYTNRINKTTLYSII-SPLGNPGTRI------EPELDNWVKNGNKVRVGELQRI 68
A+F N + + Y+II + L G + E L + NKV L
Sbjct: 416 ALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSL--- 472
Query: 69 IRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE 128
L K + + A + + M KGI +AV LD R+ E F ++
Sbjct: 473 FDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAV-LDGYSRMGKMEKVEKLFIKMQSGS 531
Query: 129 KT--YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
T TY LL+ Y +++ K + M MGI+ LT + I+ K+G +
Sbjct: 532 LTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGF 591
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
+L +M ++ D + + I + +D G L +++ I+ D +TY +
Sbjct: 592 KMLKKMIMEDTLVDQLTLNMLITN-SCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTG 650
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-----------W 295
+A+ + ++ +L ER Y LI+ +G+ RL W
Sbjct: 651 LNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSW 710
Query: 296 DLEKTACKRYINR------------------------DYITMLEALMKLGEHEEAEKVLK 331
D+ ++A R + + + T++ L K + EA K+
Sbjct: 711 DVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRG 770
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+ L G D N +I G C +G A + E++ E+G
Sbjct: 771 KMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERG 811
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 109/274 (39%), Gaps = 7/274 (2%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +L + + Q++ A + +M+ GI T+ N ++ YS+ G+ EKV + +M+
Sbjct: 469 YTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQ 528
Query: 194 AKNIFPDNFSYRICINSYGARSDL---EGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+ ++ P +Y I ++ Y + DL I+ M P D T S K+
Sbjct: 529 SGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISP----DKLTCHSIILGLCKS 584
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
++D +LKK D + N LI+ + L +++ Y
Sbjct: 585 GMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTY 644
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+ L + E+ +L + G + + ++I G C G +Q A + +++
Sbjct: 645 NAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEA 704
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
G ++ + + + G GK E + L
Sbjct: 705 IGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCML 738
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 147/377 (38%), Gaps = 50/377 (13%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
AE +++D + Y ++++ Y + +K L F ++KE G S ++Y ++
Sbjct: 392 AEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLN 451
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
LY K G+ K + EM++ I +N +Y + IN + D I EM
Sbjct: 452 LYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM------- 504
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
+++ L Q D YN LI + +GN + +
Sbjct: 505 -------------LRSGL----------------QPDRAIYNLLIEAFCKMGNMDRAICI 535
Query: 295 WDLEKTACKRY--INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
LEK +R NR + ++E G+ + A L SG NA+I G
Sbjct: 536 --LEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL 593
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
VQ A ++L+ + G +++ ++ GY +G + F+ ++ G
Sbjct: 594 VRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK-----IKESG 648
Query: 413 WKPDPKVITSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGK--GVD 469
K D + ++L G +Q A + IP N +Y+ I R G +
Sbjct: 649 LKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAE 708
Query: 470 ELLDSMKADGIDEDEET 486
+L+ MK DG+ + T
Sbjct: 709 DLMKQMKEDGVPPNIHT 725
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 121/283 (42%), Gaps = 14/283 (4%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E + + +G ++ Y ++ A + F M+ GI + + ++ Y+
Sbjct: 294 EPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 353
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSD------LEGMEIILREMESQPHIVLDWSTYA 241
+ EMK++ + +Y I I+ + +D +E E ++REME + I Y
Sbjct: 354 CVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREME-EDGIDAPIDVYH 412
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
S H Y +K V ++ +E + I Y L++LY +G ++ L + ++
Sbjct: 413 SMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESC 472
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
++ N+ Y ++ + L + A + +E SG D I N +I +C G + A
Sbjct: 473 GIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRA 532
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
ILE + ++ + ++ + GY AG MK+AL
Sbjct: 533 ICILEKMQKERMQPSNRAFRPIIEGYAVAGD-------MKSAL 568
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 81 ALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT--YQTYGALL 138
AL+ D M R G CV + + + R H A S + T TY ++
Sbjct: 567 ALDTLDLMRRSG-CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 625
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
Y KA +F K+KE G+ L Y ++ K+G+ + V EM + I
Sbjct: 626 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 685
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
+ F Y I I+ + R D+ E ++++M+ + + + TY S YI N KA D
Sbjct: 686 RNTFIYNILIDGWARRGDVWEAEDLMKQMK-EDGVPPNIHTYTS----YI--NACCKAGD 738
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASL 285
+++AE+ +E+ +G + Y +L
Sbjct: 739 -MQRAEKVIEEMVDVGLKPNVKTYTTL 764
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 19/235 (8%)
Query: 55 KNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCD---HAVQLDLIGRV 111
++G K+ V + ++R K R AL V+ M+ + I P + + + +D R
Sbjct: 646 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI----PRNTFIYNILIDGWARR 701
Query: 112 HGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
AE +K+D TY + +N + +A +M ++G+ + TY
Sbjct: 702 GDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTY 761
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR------SDLEGMEII 223
++ +++ ++ EMK + PD SY + S +R S G+ +
Sbjct: 762 TTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISV 821
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
REM S+ + +D T A H+ + I++ L +A +R+ D FL
Sbjct: 822 CREM-SENDLTVDLRT---AVHWSRWLHKIERTGGALTEALQRIFPPDWNSLEFL 872
>gi|359490014|ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 171/397 (43%), Gaps = 23/397 (5%)
Query: 105 LDLIGRVHGFLSAESYFS-----NLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
++ +G V L AE+ F LK D + Y +L +R+ + A +M
Sbjct: 65 IEALGSVGRTLEAEAIFREMVHLGLKLDLRVYNV---MLRSCLRKGLLELADKVLAEMDA 121
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-E 218
+GI + TY ++ Y + G+ V V+ EM PD+F Y I Y +
Sbjct: 122 LGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKK 181
Query: 219 GMEII--LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
MEI+ +REM + LD Y S + K + +A +V +K +E + D + +N
Sbjct: 182 AMEIVREIREM----GVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWN 237
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
LI + G+ + L L+ + + +IT++ L + G+ + ++ + +
Sbjct: 238 SLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCR 297
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G+ I ++ Y G Q E + L +G + + + V+A Y G E+
Sbjct: 298 GHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQT 357
Query: 397 FQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG-SVQDVEAFVAALRTVIPMNRQMYH 455
+ ++ +E +G +P+ ++ +++ G G ++ + + T I + Y
Sbjct: 358 VKVLQ-----LMETEGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKDTGISPDVVTYS 412
Query: 456 AFIKANIRNGK--GVDELLDSMKADGIDEDEETKEIL 490
+KA IR K V E+ + M++ G D + +E+L
Sbjct: 413 TLMKACIRARKFDKVPEIYEEMESAGCTPDRKAREML 449
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 125/305 (40%), Gaps = 41/305 (13%)
Query: 127 DEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
+E + Y A + R DKA+ +M+ +G +LS +Y ++ G+ +
Sbjct: 19 EELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAE 78
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
+ EM + D Y + + S + LE + +L EM++ I + +TY + +
Sbjct: 79 AIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALG-IGRNRATYEALVDY 137
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
Y +A ++ V+ + D Y+ +I +Y G +W
Sbjct: 138 YGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNG-------MW----------- 179
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
++A ++++E G S D RI N++I + G + A + E
Sbjct: 180 -----------------KKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFE 222
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ E+G +W + + AG + + L ++ +G PDPK+ +I+S+
Sbjct: 223 KMQEEGVKPDIMTWNSLIQWHCKAGDVGKALE-----LFSKMQEEGLYPDPKIFITIISR 277
Query: 427 LGDEG 431
LG++G
Sbjct: 278 LGEQG 282
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 98/222 (44%), Gaps = 8/222 (3%)
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHE 324
E E+ G+ YN I +G+ + ++L + Y T++EAL +G
Sbjct: 16 ENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTL 75
Query: 325 EAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
EAE + +E G D R+ N ++ GL++ A+ +L ++ G ++ +
Sbjct: 76 EAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALV 135
Query: 385 AGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
Y AG+ + A+ + G+ PD V + ++ D G + V +R
Sbjct: 136 DYYGRAGRLNDVW-----AVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIR 190
Query: 445 TV-IPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDED 483
+ + +++++Y++ I + G+ + E+ + M+ +G+ D
Sbjct: 191 EMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPD 232
>gi|410110081|gb|AFV61120.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
camara]
Length = 381
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 156/364 (42%), Gaps = 25/364 (6%)
Query: 73 RKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT 130
RK +S+A+ + + R G F P + +++ G+ F A S S +K
Sbjct: 15 RKLCDYSKAISIFSRLKRSG---FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVX 71
Query: 131 YQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
T Y LL YV ++ +ALS F +M+E+ L T N ++ +Y + G ++ +
Sbjct: 72 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 131
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
M+ I P+ SY + YG ++L G I L + + +I + TY S Y
Sbjct: 132 FWGMRKMGIEPNVVSYNTLLRVYG-DAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYG 190
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K +KA++++++ + R + + I Y+ +IS++ +G L+ +++
Sbjct: 191 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 250
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP-NAVIIGYCNNGLVQNAEAILED 367
+ TM+ A + G A+++L E + N IP + I G ++ A +
Sbjct: 251 LFQTMIVAYERAGLVAHAKRLLHELKRPDN-----IPRDTAIHILAGAGRIEEATYVFRQ 305
Query: 368 LVEKGKA---TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
++ G+ T + + Y F M+ G G+ PD VIT +L
Sbjct: 306 AIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMR--------GLGYFPDSNVITVVL 357
Query: 425 SKLG 428
+ G
Sbjct: 358 NAYG 361
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 44/239 (18%), Positives = 99/239 (41%), Gaps = 6/239 (2%)
Query: 169 YNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
Y++++ L K Y K + + +K PD +Y IN +G ++ EM+
Sbjct: 7 YSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMK 66
Query: 229 SQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNK 288
+ + + ++Y++ Y++ +A V + E D N +I +Y LG
Sbjct: 67 T-AGVXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMA 125
Query: 289 SEVLRL-WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
E +L W + K + + Y T+L EA + + + + N+
Sbjct: 126 KEADKLFWGMRKMGIEPNV-VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNS 184
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG---FQCMKAA 403
+I+ Y + A +++++ +G +++ + + + GK +R FQ ++++
Sbjct: 185 MIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 243
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ Y A ++ Y + +A F KE LS L +N ++ Y + +YEK ++
Sbjct: 500 ECYSANIDAYGERGHILEAEKAFLCCKE-SRKLSVLEFNVMIKAYGISNRYEKACQLIDS 558
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ + PD FSY I + + L +M+ + +V D Y + +IK
Sbjct: 559 MENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQ-ETQLVSDCIPYCAVISSFIKLG 617
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
++ A + K+ Q D + Y LI+ +A +GN E + + + A Y
Sbjct: 618 QLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYN 677
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++++ K+G EEA++ K + S D N +I Y +V+ AE I E L K
Sbjct: 678 SLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKRK 737
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
G A S+A++ Y GK + FQ ++
Sbjct: 738 GDA-NEFSFAMMLCMYKRIGKLKEAFQIVQ 766
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 150/335 (44%), Gaps = 11/335 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +++ Q ++A S +KM+E+ T TYN ++ L++K ++ +M
Sbjct: 362 TFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKM 421
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PD SYR + ++ R + EI++ EM+ + + +D T ++ YI+A +
Sbjct: 422 KEARLEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERG-LEIDEFTQSALTRMYIEAGM 480
Query: 253 IDKASDVLKKAEERLE-QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+ K+ ++ LE Y+ I Y G+ E + + K + K + ++
Sbjct: 481 LKKSWLWFRRF--HLEGNMSSECYSANIDAYGERGHILEAEKAFLCCKESRKLSV-LEFN 537
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
M++A +E+A +++ E G D N++I + L A+ L + E
Sbjct: 538 VMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQET 597
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
+ + V + + G+ E M L + G +PD V +++ D G
Sbjct: 598 QLVSDCIPYCAVISSFIKLGQLE-----MAEGLFKEMIGYNVQPDVVVYGILINAFADVG 652
Query: 432 SVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNG 465
+V++ +V ALR +PMN +Y++ IK + G
Sbjct: 653 NVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVG 687
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/418 (20%), Positives = 173/418 (41%), Gaps = 24/418 (5%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT- 130
L+++ + +ALE+ +W+ +KG + + L ++G+ + ES + + T
Sbjct: 170 LKEQSCWERALEIFEWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITP 229
Query: 131 -YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
TYG L++ Y + T++AL +M + G+ +T ++ Y K G+++K
Sbjct: 230 VNSTYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQ-- 287
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
F N+S + G S+ + E SQPH+ L TY + Y K
Sbjct: 288 --------FFKNWSLGKTLKDEGKTSEPTATSAV--ESASQPHVCLSSYTYNTLIDTYGK 337
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINR 308
A + +ASD + + +N +I + + G E L +E+ C R
Sbjct: 338 AGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPP-DTR 396
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ K + A K+ + + D ++ + LV AE ++ ++
Sbjct: 397 TYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIRHLVGEAEILVSEM 456
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
E+G + + + Y +AG ++ + + ++EG + ++ + G
Sbjct: 457 DERGLEIDEFTQSALTRMYIEAGMLKKSWLWFR---RFHLEG---NMSSECYSANIDAYG 510
Query: 429 DEGSVQDVEAFVAALRTVIPMNRQMYHAFIKA-NIRNG-KGVDELLDSMKADGIDEDE 484
+ G + + E + ++ ++ IKA I N + +L+DSM+ G+ D+
Sbjct: 511 ERGHILEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDK 568
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
YG L+N + +A+++ ++ G+ ++ + YN ++ LY+K G E+ + +
Sbjct: 640 VYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKML 699
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+A + PD +S I+ Y RS ++ E I ++ + + ++A Y +
Sbjct: 700 QASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKGDA--NEFSFAMMLCMYKRIGK 757
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
+ +A +++K E D + YN ++ YA G
Sbjct: 758 LKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDG 791
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 117 AESYFSNLKDDEKTYQTYGALLNC-YVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCL 175
AE F +LK + A++ C Y R + +A +KM+E+G+ L+YN+++
Sbjct: 727 AEEIFESLKRKGDANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGF 786
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
Y+ G+++ EM I PD+ +++
Sbjct: 787 YAMDGRFKDAVGTFKEMIEAAIQPDDCTFK 816
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 147/346 (42%), Gaps = 16/346 (4%)
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG- 180
+ L+ T ++ A+++ Y R A+ FR M+ G+ + ++YN ++ +K
Sbjct: 204 ARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEV 263
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
++ V EM A+ I PD +Y ++ ++ E + +L EM+ Q IV D TY
Sbjct: 264 DFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMD-QKGIVRDAFTY 322
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
+ K ID A VL++ R + Y+ +I A + L L++ K
Sbjct: 323 NTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKL 382
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
Y TM+ KLG +EA KE E G D NA++ GY G+
Sbjct: 383 RSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDE 442
Query: 361 AEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
+ E++ K PN +++ + Y G + A+ VY + K + +
Sbjct: 443 VRRLFEEM--KAWNIYPNTLTYSTMIDVYTKGG-------MFQEAMDVYKDFKKAQLEVD 493
Query: 419 VI--TSILSKLGDEGSVQ-DVEAFVAALRTVIPMNRQMYHAFIKAN 461
V+ TSI+ L G V+ + +A + I N +++ I A+
Sbjct: 494 VVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDAS 539
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 133/311 (42%), Gaps = 15/311 (4%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ AL+ Y + DKA+ F K+ + + N ++ + G+ EK K
Sbjct: 119 FMALIQHYGKAGWVDKAVDVFHKLTSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEII---LREMESQPHIVLDWSTYASAAHFYIKA 250
+ P++ S+ I I + + D E + + EME QP +V TY S F +
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVV----TYNSLIGFLCRN 234
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL-WDLEKTACKRYINRD 309
N + KA+ +L+ ++ + + + + L+ G +E +L +D+E CK + +
Sbjct: 235 NDMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGL-VN 293
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++ L K G+ +EA+ +L E + D I N ++ C G V A L ++
Sbjct: 294 YGVLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQ 353
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
KG ++ ++ G+ G + G + A L+ P P ++S L
Sbjct: 354 MKGCKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLA-----SRHSPTPATFVRMVSGLIK 408
Query: 430 EGSVQDVEAFV 440
G++ D FV
Sbjct: 409 GGNL-DHACFV 418
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 134/298 (44%), Gaps = 10/298 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL++ + + + A+ F KMK+ I + T+N ++ + K G+ VL M
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+I PD +Y ++ Y + + + + I M S ++ + Y + + + K +
Sbjct: 298 MKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGG-VIANVQIYTTMVNGFCKIKM 356
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+D+A ++ ++ R + + Y+ LI LG L+L D + Y +
Sbjct: 357 VDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSS 416
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+L+AL K ++A +L + G D +I G C +G +++A+ + EDL+ KG
Sbjct: 417 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG 476
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK----VITSILSK 426
++ V+ G+ D G ++ AL +E G P+ K VI S+ K
Sbjct: 477 YNLDVYAYTVMIQGFCDKGFFDKAL-----ALLSKMEDNGCIPNAKTYELVILSLFEK 529
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 157/385 (40%), Gaps = 45/385 (11%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MCLYSKTGQYEK 184
E + T+ L+NC+ + + S F K+ + G + +T+N + +CL Q
Sbjct: 93 ESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALH 152
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYA 241
D ++ A+ D SY IN + +L+ ++ QP+ V+ Y
Sbjct: 153 FHD---KVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVM----YN 205
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
KA L++ A D+ + + D YN LIS ++++ + + L++ K
Sbjct: 206 MIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMK-- 263
Query: 302 CKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
K IN + T +++ K G+ +A+ VL D N+++ GYC+ V
Sbjct: 264 -KENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKV 322
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
A+ I + + G + + G+ + A++++ E + K P
Sbjct: 323 NKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDE-------AINLFEEMRCRKIIPN 375
Query: 419 VIT--SILSKLGDEGSVQDVEAFVAALRTV-------IPMNRQMYHAFIKANIRNGKGVD 469
V+T S++ L G + AL+ V P N Y + + A +N VD
Sbjct: 376 VVTYSSLIDGLCKLGRI------FYALKLVDEMHDRGQPPNIVTYSSILDALCKN-HHVD 428
Query: 470 E---LLDSMKADGIDEDEETKEILV 491
+ LL ++K GI D T IL+
Sbjct: 429 KAIALLTNLKDQGIRPDMYTYTILI 453
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 90/217 (41%), Gaps = 19/217 (8%)
Query: 14 HNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVKNG-NKVR-VGELQRIIRD 71
+N++ + N++NK I + + G ++ + NG K++ V E + +
Sbjct: 309 YNSLMDGYCSINKVNKAK--DIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEE 366
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY 131
+R RK + S ++ G+C +A L L+ +H +
Sbjct: 367 MRCRKIIPNVVTYSSLID--GLCKLGRIFYA--LKLVDEMHD-----------RGQPPNI 411
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TY ++L+ + DKA++ +K+ GI TY ++ ++G+ E +V +
Sbjct: 412 VTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFED 471
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
+ K D ++Y + I + + + +L +ME
Sbjct: 472 LLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKME 508
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 142/345 (41%), Gaps = 43/345 (12%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLS-----AESYFS 122
+ + + +R R+ A + M +GI P H + + G FLS A +F
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGI---EPTRHTFNVMIWG---FFLSGKVETANRFFE 174
Query: 123 NLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
++K E + TY ++N Y R ++ ++A +F +MK I + +TY ++ Y
Sbjct: 175 DMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVD 234
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
Q + ++ EMK I P+ +Y + + +IL+EM + D S +
Sbjct: 235 QVDDALRLVEEMKGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIF 294
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG-YNFLISLYASLGNKSEVLRLWDLEK 299
+ K+ +D A+DVL KA RL G Y LI + G + ++L D
Sbjct: 295 MRLISSHCKSGNLDAAADVL-KAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLD--- 350
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
+ I +D I ++ + L N+Y N +I CNNG
Sbjct: 351 ----KLIEKDIILRPQSTL---------------HLEPNAY-----NPMIEYLCNNGQAS 386
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
AE ++ L++ G P + + G+ G + F+ +K L
Sbjct: 387 KAETLVRQLMKLG-VQDPTALNTLIRGHSQEGSPDSAFELLKIML 430
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 155/368 (42%), Gaps = 35/368 (9%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E+T ++Y AL +R+ + A +F KM GI + T+N ++ + +G+ E
Sbjct: 112 ERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANR 171
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAA 244
+MK++ I PD +Y IN Y +E E EM+ +P +V TY +
Sbjct: 172 FFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV----TYTTLI 227
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI--SLYASLGNKSEVLRLWDLEKTAC 302
Y+ +D+ D L+ EE + GI N + +L L N ++ + K
Sbjct: 228 KGYVS---VDQVDDALRLVEEM--KGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMM 282
Query: 303 KRYI----NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
+Y+ N ++ ++ + K G + A VLK + +I +C G
Sbjct: 283 DKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQY 342
Query: 359 QNAEAILEDLVEKG-----KATT---PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG 410
A +L+ L+EK ++T PN++ + + G+ + ++ + + V+
Sbjct: 343 DKAVKLLDKLIEKDIILRPQSTLHLEPNAYNPMIEYLCNNGQASKAETLVRQLMKLGVQ- 401
Query: 411 KGWKPDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD 469
DP + +++ EGS E LR + + Y++ +++ ++ + D
Sbjct: 402 -----DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXD 456
Query: 470 --ELLDSM 475
LDSM
Sbjct: 457 AKAALDSM 464
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/420 (18%), Positives = 167/420 (39%), Gaps = 9/420 (2%)
Query: 80 QALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--KDDEKTYQTYGAL 137
AL+ W+ R + H ++++GR A ++ K E + +
Sbjct: 27 HALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMM 86
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNI 197
++ Y ++ +++ F+KM+E+G+ + +YN + + + G+Y +M ++ I
Sbjct: 87 IDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGI 146
Query: 198 FPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKAS 257
P ++ + I + +E +M+S+ I D TY + + Y + +++A
Sbjct: 147 EPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVVTYNTMINGYYRVKKMEEAE 205
Query: 258 DVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEAL 317
+ + R + + Y LI Y S+ + LRL + K + + Y T+L L
Sbjct: 206 KYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGSGIKPNAITYSTLLPGL 265
Query: 318 MKLGEHEEAEKVLKE-WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
+ EA +LKE + D I +I +C +G + A +L+ ++ T
Sbjct: 266 CNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTE 325
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALS---VYVEGKGWKPDPKVITSILSKLGDEGSV 433
+ ++ + AG+ ++ + + + + +P ++ L + G
Sbjct: 326 AGHYGLLIEKFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPNAYNPMIEYLCNNGQA 385
Query: 434 QDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETKEILV 491
E V L + + + I+ + + G ELL M +D ++ LV
Sbjct: 386 SKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLV 445
>gi|410110071|gb|AFV61115.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
macrostachya]
Length = 437
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 182/437 (41%), Gaps = 79/437 (18%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRV-GEL---QRIIRDLRKRKRFSQALE 83
++ T ++I+ G G + L +W++ + RV G+L +I RK +S+A+
Sbjct: 11 DRYTYSTLITHFGKEGL-FDAAL-SWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 68
Query: 84 VSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT--YGALLN 139
+ + R G F P + +++ G+ F A S S ++ T Y LL
Sbjct: 69 IFSRLKRSG---FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLT 125
Query: 140 CYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP 199
YV ++ +ALS F +M+E+ L T N ++ +Y + G ++ + M+ I P
Sbjct: 126 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 185
Query: 200 DNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
+ SY + YG ++L G I L + + +IV + TY S Y K +KA+++
Sbjct: 186 NVVSYNTLLRVYG-DAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNL 244
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
+++ + R + + I Y+ +IS++ K
Sbjct: 245 IQEMQNRGIEPNSITYSTIISIWG-----------------------------------K 269
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
+G+ + A + ++ SG D + +I+ Y GLV +A+ +L +L K P
Sbjct: 270 VGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHEL--KSPDNIPRD 327
Query: 380 WAV-VAAG-------------YFDAGKTE--RGFQCMKAALSVY------------VEGK 411
A+ + AG DAG+ + F+ M S Y + G
Sbjct: 328 TAIHILAGAGRIEEATYVFRQAIDAGEVKDIMVFERMIHLFSKYKKYANVVEVFDKMRGL 387
Query: 412 GWKPDPKVITSILSKLG 428
G+ PD VI +L+ G
Sbjct: 388 GYFPDSNVIALVLNAYG 404
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 76 KRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKD--DEKTYQT 133
K+F +AL V M R+ C+ + +D+ G++ A+ F ++ E +
Sbjct: 131 KKFLEALSVFSEM-REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 189
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y LL Y +A+ F M+ I + +TYN +M +Y KT ++EK +++ EM+
Sbjct: 190 YNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 249
Query: 194 AKNIFPDNFSYRICINSYGARSDLE------------GMEI------------------- 222
+ I P++ +Y I+ +G L+ G+EI
Sbjct: 250 NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVA 309
Query: 223 ----ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+L E++S +I D +A H A I++A+ V ++A + E KD + + +
Sbjct: 310 HAKRLLHELKSPDNIPRD-----TAIHILAGAGRIEEATYVFRQAIDAGEVKDIMVFERM 364
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM-LEALMKLGEHEEAEKVLKEWELSG 337
I L++ + V+ ++D + + + + I + L A KL E ++A V E + G
Sbjct: 365 IHLFSKYKKYANVVEVFD-KMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVG 423
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 164/400 (41%), Gaps = 57/400 (14%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---C-----------L 175
T TY L++C R + + AL+ F ++ G+ + + + ++ C L
Sbjct: 112 TSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDIL 171
Query: 176 YSKTGQYEKVPDV---------------------LTEMKAKN---IFPDNFSYRICINSY 211
+T + VPDV L M A+ PD +Y I+ +
Sbjct: 172 LHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGF 231
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
D+ + +EM Q I D TY+S H KA +DKA L++ + D
Sbjct: 232 FKEGDVNKACDLFKEM-VQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEK 328
YN LI Y+S G E +R++ K ++ I D + T++ +L K G+ +EA
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVF---KEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
V + G + D ++ GY G + + + + ++ G A ++ V+ Y
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYA 407
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKLGDEGSVQD-VEAFVAALRT 445
+ G ++ A+ ++ E + P V+T ++++ L G + D +E F +
Sbjct: 408 NCGMLDK-------AMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460
Query: 446 VIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
+ ++ YH I+ +G EL+ + +G+ D
Sbjct: 461 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLD 500
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/356 (19%), Positives = 147/356 (41%), Gaps = 13/356 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+ Y DKA+ F +M++ G+ +TY ++ + G+ + + +M
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD ++Y I + L + ++ E+ + + LD + S + K
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN-GMRLDIVFFGSIINNLCKLGR 516
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A ++ D + YN L+ Y +G + LR++D +A Y T
Sbjct: 517 VMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 576
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ K+G +E + +E G T + N +I G G A+ ++ E G
Sbjct: 577 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 636
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKLGDE 430
A ++++V G F +C A+ ++ E + +IT ++++ +
Sbjct: 637 IAMNKCTYSIVLRGLFKN-------RCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 689
Query: 431 GSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
V++ + A++ R+ + Y I I+ G + +++ SM+ G + D
Sbjct: 690 RRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 745
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 153/412 (37%), Gaps = 95/412 (23%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++++ + R DKA + R+M G+ TYN+++ YS TGQ+++ V EM
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 317
Query: 193 K--------------------------AKNIF---------PDNFSYRICINSYGARSDL 217
+ A+++F PD FSY I +N Y + L
Sbjct: 318 RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCL 377
Query: 218 EGME-----------------------------------IILREMES---QPHIVLDWST 239
M II EM +PH+V +
Sbjct: 378 VDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTV 437
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQ---KDGIGYNFLISLYASLGNKSEVLRLWD 296
A+ I K D ++K + ++Q D Y+ LI + + G+ +L+ +
Sbjct: 438 IAALCR-------IGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS---LLKAKE 487
Query: 297 LEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
L + D + +++ L KLG +A+ + G D + N ++ GYC
Sbjct: 488 LISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYC 547
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
G ++ A + + +V G + + GY G+ + G + L KG
Sbjct: 548 LVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQ-----KGI 602
Query: 414 KPDPKVITSILSKLGDEG-SVQDVEAFVAALRTVIPMNRQMYHAFIKANIRN 464
KP + I+ L + G +V F + I MN+ Y ++ +N
Sbjct: 603 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKN 654
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 7/220 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y L++ Y + +KAL F M GI + + Y ++ Y K G+ ++ + EM
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K I P Y I I+ ++ EM ++ I ++ TY+ K
Sbjct: 598 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM-TESGIAMNKCTYSIVLRGLFKNRC 656
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
D+A + K+ + D I N +I A + V DL + + + +T
Sbjct: 657 FDEAIFLFKELRAMNVKIDIITLNTMI---AGMFQTRRVEEAKDLFASISRSGLVPCAVT 713
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
M+ L+K G EEAE + + +G D+R+ N V+
Sbjct: 714 YSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 753
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 71/166 (42%), Gaps = 7/166 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L + R D+A+ F++++ M + + +T N ++ +T + E+ D+ +
Sbjct: 643 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 702
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ P +Y I I + +E E + M++ +P D +K
Sbjct: 703 SRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP----DSRLLNHVVRELLK 758
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
N I +A L K +ER + + L+ L++S G E +R
Sbjct: 759 KNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 156/367 (42%), Gaps = 19/367 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG +LN + QT A+ RKM+E I L + Y+ I+ K G + ++ EM
Sbjct: 328 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 387
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+ K I + +Y I I + + +LR+M + P++V T++ ++K
Sbjct: 388 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV----TFSVLIDSFVK 443
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT-ACKRYINR 308
+ +A ++ K+ R D I Y LI + + + ++ DL + C I R
Sbjct: 444 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI-R 502
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
+ ++ K ++ ++ ++ L G DT N +I G+C G + A+ + +++
Sbjct: 503 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 562
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
V + ++ ++ G D G++E+ + + +E + D + I+ +
Sbjct: 563 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK-----IEKSKMELDIGIYNIIIHGMC 617
Query: 429 DEGSVQDVEAFVAA--LRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDE 484
+ V D + L+ V P + Y+ I + G + L M+ DG D
Sbjct: 618 NASKVDDAWDLFCSLPLKGVKP-GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 676
Query: 485 ETKEILV 491
T IL+
Sbjct: 677 WTYNILI 683
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 175/426 (41%), Gaps = 72/426 (16%)
Query: 39 LGNPGTRIEP-ELDNWVK-----NGNKVRVGE-LQRII---RDLRKRKRFSQALEVSDWM 88
L + G ++EP E D W+K + K+R + + R++ R+L R+R L D
Sbjct: 109 LTSIGEKLEPNEFDEWIKEVDVGSDGKIRYEDFIARMVANDRNLSYRERLRSGL--VDIK 166
Query: 89 NRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSN------------LKDDEKTYQTYGA 136
I +F H+ L + SA + LK T
Sbjct: 167 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 226
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MCLYSKTGQYEKVPDVLTEMK 193
++NC+ R R+ A S K+ ++G +T+T++ + +CL + + ++ D + EM
Sbjct: 227 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 286
Query: 194 AKNIFPDNFSYRICINSYG-ARSDLEGMEIILREME--SQPHIVLDWSTYASAAHFYIKA 250
K PD + +N + + E M +I + +E QP+ V TY + K+
Sbjct: 287 HK---PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV----TYGPVLNVMCKS 339
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL---------------- 294
A ++L+K EER + D + Y+ +I G+ L
Sbjct: 340 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 399
Query: 295 ------------WD----LEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWEL 335
WD L + KR IN + +T ++++ +K G+ EAE++ KE
Sbjct: 400 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 459
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G + DT ++I G+C + A +++ +V KG ++ ++ GY A + +
Sbjct: 460 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 519
Query: 396 GFQCMK 401
G + +
Sbjct: 520 GLELFR 525
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 151/368 (41%), Gaps = 21/368 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T L+N + +A+ KM E G + +TY ++ + K+GQ ++L +M
Sbjct: 293 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 352
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ +NI D Y I I+ L+ + EME + I + TY + A
Sbjct: 353 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK-GITTNIITYNILIGGFCNAGR 411
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
D + +L+ +R + + ++ LI + G E +L K R I D IT
Sbjct: 412 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE---ELHKEMIHRGIAPDTIT 468
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+++ K ++A +++ G + R N +I GYC + + + +
Sbjct: 469 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 528
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITS--ILSKL 427
+G ++ + G+ + GK + A ++ E K P ++T +L L
Sbjct: 529 LRGVVADTVTYNTLIQGFCELGK-------LNVAKELFQEMVSRKVPPNIVTYKILLDGL 581
Query: 428 GDEG-SVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLD---SMKADGIDED 483
D G S + +E F ++ + ++ +Y+ I + N VD+ D S+ G+
Sbjct: 582 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG-MCNASKVDDAWDLFCSLPLKGVKPG 640
Query: 484 EETKEILV 491
+T I++
Sbjct: 641 VKTYNIMI 648
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 104/245 (42%), Gaps = 44/245 (17%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+T+ L+N Y + + D L FRKM G+ T+TYN ++ + + G+ ++ E
Sbjct: 502 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 561
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M ++ + P+ +Y+I ++ + E
Sbjct: 562 MVSRKVPPNIVTYKILLDGLCDNGESE--------------------------------- 588
Query: 252 LIDKASDVLKKAEE-RLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN--- 307
KA ++ +K E+ ++E GI YN +I + N S+V WDL + + +
Sbjct: 589 ---KALEIFEKIEKSKMELDIGI-YNIIIH---GMCNASKVDDAWDLFCSLPLKGVKPGV 641
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
+ Y M+ L K G EAE + ++ E G++ D N +I + +G + ++E+
Sbjct: 642 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 701
Query: 368 LVEKG 372
L G
Sbjct: 702 LKRCG 706
>gi|224058965|ref|XP_002299667.1| predicted protein [Populus trichocarpa]
gi|222846925|gb|EEE84472.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/408 (19%), Positives = 174/408 (42%), Gaps = 48/408 (11%)
Query: 60 VRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAES 119
++V +L I+R+ ++ R+ ++ DWM R + ++ + +G A
Sbjct: 2 LKVQDLNIILRNFGEQCRWQDLSQLFDWMQRHNKISASS--YSSYIKFMGTSLNPAKALE 59
Query: 120 YFSNLKDDEKTYQTY--GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM--CL 175
+ ++ D+ + +LL C VR + D ++ F KMK G+ +TY+ ++ C+
Sbjct: 60 IYHSIPDESTKTNVFICNSLLRCLVRNTKFDSSMKFFHKMKNNGLTPDAITYSTLLAGCM 119
Query: 176 YSKTGQYEKVPDVLTEM--------------------------KAKNIF---------PD 200
K G Y K D++ E+ +A++ F P+
Sbjct: 120 KIKDG-YSKALDLVQELNYNGLQMDSIMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPN 178
Query: 201 NFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVL 260
F Y +N+Y + + + E ++++M+S +V + + Y++ L +K+ D+L
Sbjct: 179 IFHYSSLLNAYSSDGNYKKAEELVQDMKSSG-LVPNKVILTTLLKVYVRGGLFEKSRDLL 237
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKL 320
+ + K+ + Y L+ A G E +++ K + Y M+ + +
Sbjct: 238 VELDTLGFAKNEMPYCLLMDGLAKNGLLDEARSVFNEMKEKRVKSGGYSYSIMISSFCRG 297
Query: 321 GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
G EEA+++ +E+E + YD I N ++ YC G ++ + + E + N++
Sbjct: 298 GLFEEAKELAEEFEAKYDKYDVVILNTILCAYCRTGEKESVMRTMRKMDELAISPDYNTF 357
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
++ + +Q M+ + KG +P ++ +S++ LG
Sbjct: 358 HILIKYFCKEKLYMLAYQTMED-----MHRKGHQPMEELCSSLILHLG 400
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 152/359 (42%), Gaps = 18/359 (5%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
+ T TY L++CY R + D L+ ++ + G+ +Y+ I + K G+ +K
Sbjct: 94 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDK 152
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
+ EM + + P I +++ E I+++M I D TY+
Sbjct: 153 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS-GIAPDLFTYSLII 211
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
K+ +DKA VL++ E + + I YN LI Y+ G +E +R++ + ++C
Sbjct: 212 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK-QMSSCGV 270
Query: 305 YINRDYI-TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY--CNNGLVQNA 361
D + + AL K G EA+ + L G D + ++ GY + + +
Sbjct: 271 IPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADV 330
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VEGKGWKPDPKV 419
I ++ KG A + + ++ Y G M A+ ++ ++ KG PD
Sbjct: 331 HNIFNLMLTKGIAPNKHVFNILINAYARCGM-------MDKAMLIFEDMQNKGMIPDTVT 383
Query: 420 ITSILSKLGDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGV--DELLDSM 475
+++S L G + D + F + +P + +Y I+ +G+ V EL+ M
Sbjct: 384 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 442
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 117/278 (42%), Gaps = 3/278 (1%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +L+ Y ++A + M +GI + Y ++ Y K G+ + V +M
Sbjct: 489 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 548
Query: 193 KAKNIFPDNFSYRICINS-YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K + P + Y I ++ + AR ++ +ES + + TY + N
Sbjct: 549 LHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIH--TYGVVLGGLCRNN 606
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
D+A+ +L+K + D I +N +IS +G + E L+D T + Y
Sbjct: 607 CTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYS 666
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
M+ L+K +EEA+ + E SG++ D+R+ N ++ N V A L + E
Sbjct: 667 MMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 726
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE 409
++ +++A+ + G + F A +E
Sbjct: 727 NLTLEASTISLLASLFSREGMIKGLFGTAPAPAPALLE 764
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/341 (18%), Positives = 122/341 (35%), Gaps = 40/341 (11%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+ L+N Y R DKA+ F M+ G+ T+T+ ++ + G+ +
Sbjct: 347 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 406
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M + P Y I +L + ++ EM ++ ++S + K
Sbjct: 407 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 466
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--------------- 296
+ + D++ + ++ + + +N L+ Y +GN E L D
Sbjct: 467 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 526
Query: 297 -LEKTACKR-------YINRD------------YITMLEALMKLGEHEEAEKVLKEWELS 336
L CK + RD Y +L L + A+K+ E S
Sbjct: 527 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 586
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G + V+ G C N A +LE L ++ +V + F G+ +
Sbjct: 587 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 646
Query: 397 FQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
+ A+S Y G P+ + + +++ L E S ++ +
Sbjct: 647 KELFD-AISTY----GLVPNIQTYSMMITNLIKEESYEEAD 682
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 64/346 (18%), Positives = 143/346 (41%), Gaps = 16/346 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ + + DKA +M E G +++TYN ++ YS +G + + V +M
Sbjct: 206 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 265
Query: 193 KAKNIFP--DNF-SYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ + P DN S+ + +G ++ + + + +P I+ +Y++ H Y
Sbjct: 266 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDII----SYSTMLHGYAT 321
Query: 250 A--NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
A + + ++ + + +N LI+ YA G + + +++ +
Sbjct: 322 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 381
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG-LVQNAEAILE 366
+ T++ +L ++G ++A G + +I G CN+G LV+ E I E
Sbjct: 382 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 441
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ + ++ + G+ G M + G +P+ S++
Sbjct: 442 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT-----GQRPNVVTFNSLMEG 496
Query: 427 LGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVDEL 471
G++++ A + A+ ++ I N +Y + +NG+ D L
Sbjct: 497 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 542
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 136/318 (42%), Gaps = 18/318 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y AL+ Y ++ ALS F +K GI ++Y ++ Y ++ Q K +V M
Sbjct: 357 SYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMM 416
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYIK 249
+ + P+ +Y I++YG+ L I R+ME ++P++V + A+ + K
Sbjct: 417 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSRSKKK 476
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
N+ VL A+ R + YN I Y N +E+ + L +T K+ + D
Sbjct: 477 VNV----ETVLSAAQSRGINLNTAAYNSAIGSYI---NAAELEKAIALYQTMRKKKVKAD 529
Query: 310 YIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
+T ++ ++ ++ EA LKE E + ++V+ Y G V AE+I
Sbjct: 530 SVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 589
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ K P+ A + + + G C L + +E G +PD ++++
Sbjct: 590 QM--KMAGCKPDVIAYTSMLHAYNASEKWGKAC---ELFLEMEANGIEPDSIACSALMRA 644
Query: 427 LGDEGSVQDVEAFVAALR 444
G +V + +R
Sbjct: 645 FNKGGQPSNVFVLMDLMR 662
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 159/393 (40%), Gaps = 50/393 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +L+ Y RQ KALS+F MK + T T+N I+ SK GQ + DV M
Sbjct: 250 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSM 309
Query: 193 KAKN--IFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PH--------------- 232
+ K PD ++ ++ Y R ++E + M ++ P+
Sbjct: 310 RDKRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHG 369
Query: 233 ----------------IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
IV D +Y S + Y ++ KA +V + + + + YN
Sbjct: 370 MSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 429
Query: 277 FLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
LI Y S G +E + ++ +E+ K + T+L A + + E VL +
Sbjct: 430 ALIDAYGSNGFLAEAVEIFRQMEQDGTKPNV-VSVCTLLAACSRSKKKVNVETVLSAAQS 488
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTER 395
G + +T N+ I Y N ++ A A+ + + +K ++ ++ +G K
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 396 GFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAF-----VAALRTVIPMN 450
+K +E +V +S+L +G V + E+ +A + +
Sbjct: 549 AISYLKE-----MEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAY 603
Query: 451 RQMYHAFIKANIRNGKGVDELLDSMKADGIDED 483
M HA+ A+ + GK EL M+A+GI+ D
Sbjct: 604 TSMLHAY-NASEKWGKAC-ELFLEMEANGIEPD 634
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 101/485 (20%), Positives = 190/485 (39%), Gaps = 91/485 (18%)
Query: 62 VGELQR-----IIRDLRKRKRFSQALEVSDWM-NRKGICVFAPCD-HAVQLDLIGRVHGF 114
VG R +IR+L +R + V WM ++K C A D + + + L R +
Sbjct: 102 VGRFARKNFPVLIRELSRRGCIELCVNVFKWMKSQKNYC--ARNDIYNMMIRLHARHNWV 159
Query: 115 LSAESYFSNLK--DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI 172
A F ++ + +TY AL+N + R Q A++ M IA S TYN++
Sbjct: 160 DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNL 219
Query: 173 MCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH 232
+ +G + + +V +M + PD ++ I +++Y +
Sbjct: 220 INACGSSGNWRQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ---------------- 263
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
Y+ A ++ +++K A+ R D +N +I + LG S+ L
Sbjct: 264 -------YSKALSYF----------ELMKGAKVR---PDTTTFNIIIYCLSKLGQSSQAL 303
Query: 293 RLWDLEKTACKRYINRDYITMLEALMKL----GEHEEAEKVLKEWELSGNSYDTRIPNAV 348
+++ + KR R + ++M L GE E V + G + NA+
Sbjct: 304 DVFNSMRD--KRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNAL 361
Query: 349 IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA---GKTERGFQCMK---- 401
+ Y +G+ +NA ++ D+ G S+ + Y + GK + F M+
Sbjct: 362 MGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERR 421
Query: 402 --------AALSVY---------------VEGKGWKPDPKVITSILSKLGDEGSVQDVEA 438
A + Y +E G KP+ + ++L+ +VE
Sbjct: 422 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSRSKKKVNVET 481
Query: 439 FVAALRTV-IPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETKEILV--- 491
++A ++ I +N Y++ I + I N +++ L +M+ + D T IL+
Sbjct: 482 VLSAAQSRGINLNTAAYNSAIGSYI-NAAELEKAIALYQTMRKKKVKADSVTFTILISGS 540
Query: 492 CTMEK 496
C M K
Sbjct: 541 CRMSK 545
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/308 (16%), Positives = 116/308 (37%), Gaps = 42/308 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ R + +A+S+ ++M+++ I L+ Y+ ++C YSK GQ + + +M
Sbjct: 532 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD +Y S H Y +
Sbjct: 592 KMAGCKPDVIAY------------------------------------TSMLHAYNASEK 615
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
KA ++ + E + D I + L+ + G S V L DL + + +
Sbjct: 616 WGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEVPFTGAVFFE 675
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+ A L E + A +++ + S + N ++ + +G V+ + ++ G
Sbjct: 676 IFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLYLFGKSGKVEAMMKLFYKIIASG 735
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
++A++ G + + ++ ++ G +P ++ I+S G+ +
Sbjct: 736 VEINFKTYAILLEHLLAVGNWRKYIEVLE-----WMSDAGIQPSNQMYRDIIS-FGERSA 789
Query: 433 VQDVEAFV 440
+ E +
Sbjct: 790 GIEFEPLI 797
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 105/235 (44%), Gaps = 22/235 (9%)
Query: 110 RVHGFLSAESYFSNLKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
R+ + A SY ++D T + Y ++L Y +Q Q +A S F +MK G +
Sbjct: 542 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVI 601
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY---GARSDLEGMEIIL 224
Y ++ Y+ + ++ K ++ EM+A I PD+ + + ++ G S++ + ++
Sbjct: 602 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLM 661
Query: 225 REMESQPHIVLDWSTYASAAHFYI--KANLID---KASDVLKKAEERLEQKDGIGYNFLI 279
RE E + A F I N + +A D+++ + L N ++
Sbjct: 662 REKE---------VPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQML 712
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYIN-RDYITMLEALMKLGEHEEAEKVLKEW 333
L+ G +++L+ + A IN + Y +LE L+ +G + +VL EW
Sbjct: 713 YLFGKSGKVEAMMKLF-YKIIASGVEINFKTYAILLEHLLAVGNWRKYIEVL-EW 765
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 147/377 (38%), Gaps = 50/377 (13%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
AE +++D + Y ++++ Y + +K L F ++KE G S ++Y ++
Sbjct: 366 AEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLN 425
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
LY K G+ K + EM++ I +N +Y + IN + D I EM
Sbjct: 426 LYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM------- 478
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
+++ L Q D YN LI + +GN + +
Sbjct: 479 -------------LRSGL----------------QPDRAIYNLLIEAFCKMGNMDRAICI 509
Query: 295 WDLEKTACKRY--INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
LEK +R NR + ++E G+ + A L SG NA+I G
Sbjct: 510 --LEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL 567
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
VQ A ++L+ + G +++ ++ GY +G + F+ ++ G
Sbjct: 568 VRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYF-----TKIKESG 622
Query: 413 WKPDPKVITSILSKLGDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGK--GVD 469
K D + ++L G +Q A + IP N +Y+ I R G +
Sbjct: 623 LKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAE 682
Query: 470 ELLDSMKADGIDEDEET 486
+L+ MK DG+ + T
Sbjct: 683 DLMKQMKEDGVPPNIHT 699
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 10/290 (3%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A + F N++ E + +L++ Y R ALS +MK G+ L+ +TY+ ++
Sbjct: 261 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILIS 320
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
++K + ++ E K K + Y I+++ ++E E ++REME + I
Sbjct: 321 GFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREME-EDGID 379
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
Y S H Y +K V ++ +E + I Y L++LY +G ++ L +
Sbjct: 380 APIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSI 439
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
++ ++ N+ Y ++ + L + A + +E SG D I N +I +C
Sbjct: 440 SKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCK 499
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
G + A ILE + ++ + ++ + GY AG MK+AL
Sbjct: 500 MGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD-------MKSAL 542
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 81 ALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT--YQTYGALL 138
AL+ D M R G CV + + + R H A S + T TY ++
Sbjct: 541 ALDTLDLMRRSG-CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 599
Query: 139 NCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIF 198
Y KA +F K+KE G+ L Y ++ K+G+ + V EM + I
Sbjct: 600 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 659
Query: 199 PDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASD 258
+ F Y I I+ + R D+ E ++++M+ + + + TY S YI N KA D
Sbjct: 660 RNTFIYNILIDGWARRGDVWEAEDLMKQMK-EDGVPPNIHTYTS----YI--NACCKAGD 712
Query: 259 VLKKAEERLEQKDGIGYNFLISLYASL 285
+++AE+ +E+ +G + Y +L
Sbjct: 713 -MQRAEKVIEEMVDVGLKPNVKTYTTL 738
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 143/364 (39%), Gaps = 56/364 (15%)
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP 231
++ Y+K G M+A+ I P+ F + +++Y D+ G + EM+S+
Sbjct: 248 MIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSE- 306
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN---K 288
+ L TY+ + K N A ++ K+A+ +L +GI Y+ +I + GN
Sbjct: 307 GLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERA 366
Query: 289 SEVLRLWDLE---------------------KTACKRYINR-----------DYITMLEA 316
E++R + + + C R Y +L
Sbjct: 367 EELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNL 426
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
+K+G+ +A + KE E G ++ + + +I G+ + NA AI E+++ G
Sbjct: 427 YVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPD 486
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV 436
+ ++ + G +R ++ ++ + +P + I+ G ++
Sbjct: 487 RAIYNLLIEAFCKMGNMDRAICILEK-----MQKERMQPSNRAFRPIIEGYAVAGDMK-- 539
Query: 437 EAFVAALRTVIPMNRQ-------MYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETK 487
+AL T+ M R Y+A I +R K +LD M GI +E T
Sbjct: 540 ----SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTY 595
Query: 488 EILV 491
I++
Sbjct: 596 TIIM 599
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 19/235 (8%)
Query: 55 KNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCD---HAVQLDLIGRV 111
++G K+ V + ++R K R AL V+ M+ + I P + + + +D R
Sbjct: 620 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI----PRNTFIYNILIDGWARR 675
Query: 112 HGFLSAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTY 169
AE +K+D TY + +N + +A +M ++G+ + TY
Sbjct: 676 GDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTY 735
Query: 170 NDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR------SDLEGMEII 223
++ +++ ++ EMK + PD SY + S +R S G+ +
Sbjct: 736 TTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISV 795
Query: 224 LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
REM S+ + +D T A H+ + I++ L +A +R+ D FL
Sbjct: 796 CREM-SENDLTVDLRT---AVHWSRWLHKIERTGGALTEALQRIFPPDWNSLEFL 846
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 1/259 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T ALL+ + ++ ++M E G+ L ++YN ++ K G+ E+ + EM
Sbjct: 503 TSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEM 562
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD ++Y + ++ + +L E + + V + TYA Y KA+
Sbjct: 563 VQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAK-EYGFVPNVYTYALLLEGYCKADR 621
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
I+ A K + + + YN LI+ Y +GN +E +L D K+ Y +
Sbjct: 622 IEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSS 681
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ + +G +EA+++ +E G + A+I G+C G + +IL ++ G
Sbjct: 682 LIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNG 741
Query: 373 KATTPNSWAVVAAGYFDAG 391
++ ++ GY G
Sbjct: 742 IRPNKITYTIMIDGYCKLG 760
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 149/355 (41%), Gaps = 16/355 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG L++ ++ ++A +M MG A + + +N ++ Y + G + V EM
Sbjct: 327 TYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEM 386
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGME-IILREMESQPHIVLDWSTYASAAHFYIKAN 251
K + P+ ++ + + + +E E +++ + S + +D +Y ++
Sbjct: 387 AMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYV-IHRLMERSG 445
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+ V K + D + ++ L G+ SE + LW K A + + + +
Sbjct: 446 FVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGH-SEAIELWF--KLAAVKGLAANTV 502
Query: 312 T---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
T +L L + G EE +VLK+ G D N +I G C G ++ A + E++
Sbjct: 503 TSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEM 562
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
V++ ++ + G D GK + + + A + G+ P+ +L
Sbjct: 563 VQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEA-----KEYGFVPNVYTYALLLEGYC 617
Query: 429 DEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGI 480
++D F L + ++ +Y+ I A R G + +L D+MK+ GI
Sbjct: 618 KADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGI 672
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 17/214 (7%)
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
D T+ +A + + K + A D+ K E + + YN +I G E LR
Sbjct: 254 DVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFK 313
Query: 296 DLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
D + +N +T ++ LMKL EEA +VL E G + + + NA+I GY
Sbjct: 314 D---RMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGY 370
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
C G + A + +++ KG ++ + G+ + + E+ Q + VY+ G
Sbjct: 371 CRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVL-----VYILSSG 425
Query: 413 WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV 446
+ V + ++ +L + FV+AL+ V
Sbjct: 426 LSVNMDVCSYVIHRLMER------SGFVSALKIV 453
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 38/222 (17%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LL Y + + + A+ F+ + + LS++ YN ++ Y + G + + M
Sbjct: 608 TYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAM 667
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K++ I P +TY+S H
Sbjct: 668 KSRGILPT------------------------------------CATYSSLIHGMCCIGR 691
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR-DYI 311
+D+A ++ ++ + Y LI + LG V + LE ++ N+ Y
Sbjct: 692 VDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSIL-LEMSSNGIRPNKITYT 750
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
M++ KLG +EA ++L E +G + DT NA+ GYC
Sbjct: 751 IMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYC 792
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY +L++ + D+A F +M+ G+ + Y ++ + K GQ + V +L
Sbjct: 675 TCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSIL 734
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EM + I P+ +Y I I+ Y +++ +L EM + I D TY + Y K
Sbjct: 735 LEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEM-IRNGIAPDTVTYNALQKGYCK 793
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+ K+ L ++ I YN LI
Sbjct: 794 ERELTVTLQSDHKSNIGLPLEEEITYNTLI 823
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 123/332 (37%), Gaps = 50/332 (15%)
Query: 161 GIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGM 220
G+A +T+T N ++ + G E+V +VL +M K + D SY I +G
Sbjct: 496 GLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLI--FGC------- 546
Query: 221 EIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK---DGIGYNF 277
W K + K EE ++Q+ D YNF
Sbjct: 547 --------------CKWG----------------KIEEAFKLKEEMVQQEFQPDTYTYNF 576
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
L+ A +G +V RL K Y +LE K E+A K K +
Sbjct: 577 LMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEK 636
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+ + N +I YC G V A + + + +G T +++ + G G+ +
Sbjct: 637 VELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAK 696
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRT-VIPMNRQMYHA 456
+ + + +G P+ T+++ G + V + + + + I N+ Y
Sbjct: 697 EIFEE-----MRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTI 751
Query: 457 FIK--ANIRNGKGVDELLDSMKADGIDEDEET 486
I + N K ELL+ M +GI D T
Sbjct: 752 MIDGYCKLGNMKEARELLNEMIRNGIAPDTVT 783
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 94/221 (42%), Gaps = 8/221 (3%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+T LL+ V+ + K+ F + G+A T+ + + K G+ D+ +
Sbjct: 222 KTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCK 280
Query: 192 MKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQ--PHIVLDWSTYASAAHFYI 248
M+ +FP+ +Y I+ E + R + S+ P +V TY +
Sbjct: 281 MEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVV----TYGVLISGLM 336
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K + ++A++VL + + + +N LI Y G+ E LR+ D +
Sbjct: 337 KLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFV 396
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+ T+L+ + + E+AE+VL SG S + + + VI
Sbjct: 397 TFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVI 437
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 142/376 (37%), Gaps = 66/376 (17%)
Query: 101 HAVQLDLIGRVHGFLSAESYFSNLKDDE------KTYQTYGALLNCYVRQRQTDKALSHF 154
H LD R F A+++F++L QTY +L + D+A++ F
Sbjct: 122 HNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLF 181
Query: 155 RKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSY--- 211
++ +A +TY+ +MC +K + + D+L EM + PD Y +
Sbjct: 182 DSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKA 241
Query: 212 -----------------GARSDLEGMEIILREM-------------------ESQPHIVL 235
GAR +L ++L + QP ++
Sbjct: 242 GEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVI- 300
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
TY H ++ +D A+ V + + D YN L+ + G E + W
Sbjct: 301 ---TYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW 357
Query: 296 DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY----DTRIPNAVIIG 351
D A R + R Y M++ L G +EA ++ W+L DT +I G
Sbjct: 358 DSAGFAGLRNL-RTYNIMIKGLFDSGMVDEA---IELWDLLEKDVACIPDTVTFGTLIHG 413
Query: 352 YCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVY--VE 409
C NG A I E+ GK S++ + G + G+ + A+ VY ++
Sbjct: 414 LCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGR-------LVDAVKVYEKMD 466
Query: 410 GKGWKPDPKVITSILS 425
G KP+ + +++S
Sbjct: 467 KDGCKPNSHIYNALIS 482
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 194/506 (38%), Gaps = 75/506 (14%)
Query: 14 HNAVFSRFYYTNRINKTTLYSIISPLGNPGTRIEPELD--NWVKNGNKVRVGELQRIIR- 70
HNA+ F R + + G G RI P L N V R G+L R +
Sbjct: 122 HNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCAR-GDLDRAVTL 180
Query: 71 --DLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDE 128
LR+R+ + S M G+ DHA LDL+ E S ++ D
Sbjct: 181 FDSLRRRQVAPDRITYSTLMC--GLAKQDRLDHA--LDLLD--------EMPRSRVQPD- 227
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKM-KEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
Y ALL + + +K + + K+ K+ G + TYN ++ K G++++V +
Sbjct: 228 --VVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGE 285
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
V M A N+ PD +Y I I+ D++G + E+ + +V+D + Y S +
Sbjct: 286 VWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEI-IKTGLVIDAAMYNSLVKGF 344
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL--EKTAC--- 302
+A + +A A ++ YN +I G E + LWDL + AC
Sbjct: 345 CQAGRVQEAWKFWDSAGFA-GLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPD 403
Query: 303 -------------KRYINR------------------DYITMLEALMKLGEHEEAEKVLK 331
+ N+ Y +M+ L +G +A KV +
Sbjct: 404 TVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYE 463
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+ + G ++ I NA+I G+C +A I + + G + T ++ + G A
Sbjct: 464 KMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAE 523
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-----EAFVAALRTV 446
K + + + G+ PD S++ L + + D + L+
Sbjct: 524 KYQEASSVAREMVE-----NGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVD 578
Query: 447 IPMNRQMYHAFIKANIRNGKGVDELL 472
+ M+ + H A GK VDE L
Sbjct: 579 VMMHNILIHGLCSA----GK-VDEAL 599
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 105/265 (39%), Gaps = 39/265 (14%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
Y AL++ + + +T A+ + KM + G + + +TYN ++ K +Y++ V E
Sbjct: 475 HIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVARE 534
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M PD I +YG+ ++R + S I
Sbjct: 535 MVENGFTPD-------ITTYGS---------LIRGLFSDKKI------------------ 560
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DL-EKTACKRYINRD 309
D A + K+ + + D + +N LI S G E L ++ D+ EK C +
Sbjct: 561 --DDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL-VT 617
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+++ L + G ++A + G D N I G C+ + +L++++
Sbjct: 618 YNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVL 677
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTE 394
+G T +W ++ G +
Sbjct: 678 SRGIIPTVITWNILVRAVIKYGPIQ 702
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 150/366 (40%), Gaps = 17/366 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +++ + ++ + DKA F +M G +TY+ ++ K K +L M
Sbjct: 205 SYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHM 264
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
K + P+ +Y I I Y + LE +L++M QP +V TY +Y K
Sbjct: 265 FDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV----TYILLIQYYCK 320
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+A V + ++ + Y+ L+ YA+ G +V L DL + +R
Sbjct: 321 IGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA 380
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ ++ A K G ++A E +G D + VI C G V++A +V
Sbjct: 381 FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMV 440
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+G + S+ + G G+ ++ L+ + +G PD + +I+ L
Sbjct: 441 SEGLSPNIISFTSLIHGLCSIGEWKK-----VEELAFEMINRGIHPDAIFMNTIMDNLCK 495
Query: 430 EGSVQDVEAFV-AALRTVIPMNRQMYHAFIKANIRNGKGVDELL---DSMKADGIDEDEE 485
EG V + + F + + N Y+ I GK +DE + D M + G+ D
Sbjct: 496 EGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGK-MDESIKQFDRMVSIGLRPDSW 554
Query: 486 TKEILV 491
T L+
Sbjct: 555 TYNALL 560
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 106/256 (41%), Gaps = 24/256 (9%)
Query: 254 DKASD-VLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA-----CKRYIN 307
D A D V ++ E D YN LI E L L L TA C +
Sbjct: 146 DDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELL-LHMTADGGYNCSPNV- 203
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+++ K GE ++A + E G D +++I G C + AEAIL+
Sbjct: 204 VSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQH 263
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL--- 424
+ +KG ++ ++ GY G+ E + +K + G G +PD V+T IL
Sbjct: 264 MFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKK-----MSGSGLQPD--VVTYILLIQ 316
Query: 425 --SKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGI 480
K+G + V F + +R N +YH + G +D +LLD M DGI
Sbjct: 317 YYCKIGRCAEARSV--FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI 374
Query: 481 DEDEETKEILVCTMEK 496
+ IL+C K
Sbjct: 375 PFEHRAFNILICAYAK 390
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 163/418 (38%), Gaps = 52/418 (12%)
Query: 117 AESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEM----GIALSTLTYN 170
A S F ++ K + Y LL+ Y T AL R + ++ GI +N
Sbjct: 327 ARSVFDSMVRKGQKPNSTIYHILLHGYA----TKGALIDVRDLLDLMIRDGIPFEHRAFN 382
Query: 171 DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
++C Y+K G +K TEM+ + PD SY I+ +E +M S+
Sbjct: 383 ILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSE 442
Query: 231 ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN 287
P+I+ ++ S H K ++ + R D I N ++ G
Sbjct: 443 GLSPNII----SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 498
Query: 288 KSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
E +D+ + Y T+++ +G+ +E+ K G D+ NA
Sbjct: 499 VVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNA 558
Query: 348 VIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK-----------TERG 396
++ GY NG V++A A+ ++ K + ++ G F AG+ +RG
Sbjct: 559 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRG 618
Query: 397 FQ-----------------CMKAALSVY--VEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
Q C+ AL ++ + K ++ D +++ L G + + +
Sbjct: 619 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAK 678
Query: 438 AFVAA--LRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
+ +A LR +P + Y IK+ I G + D+L SM+ +G D +++
Sbjct: 679 SLFSAMVLRGPVP-HVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVII 735
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 155/396 (39%), Gaps = 58/396 (14%)
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MC-----------LYSKTG 180
G L+ C+ + D A + F +MG + +T N + +C ++ +
Sbjct: 98 GILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMP 157
Query: 181 QYEKVPDVLT----------EMKAK---------------NIFPDNFSYRICINSYGARS 215
+ PDV + E K++ N P+ SY I+ +
Sbjct: 158 ELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEG 217
Query: 216 DLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG 272
+++ + EM Q P +V TY+S KA ++KA +L+ ++ +
Sbjct: 218 EVDKAYFLFDEMIGQGFPPDVV----TYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNT 273
Query: 273 IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
YN +I Y SLG E +RL + + YI +++ K+G EA V
Sbjct: 274 RTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDS 333
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
G ++ I + ++ GY G + + +L+ ++ G ++ ++ Y G
Sbjct: 334 MVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGA 393
Query: 393 TERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTVIPM 449
++ A++ + E + G +PD ++++ L G V+D V F + +
Sbjct: 394 VDK-------AMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSP 446
Query: 450 NRQMYHAFIKA--NIRNGKGVDELLDSMKADGIDED 483
N + + I +I K V+EL M GI D
Sbjct: 447 NIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPD 482
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 165/396 (41%), Gaps = 44/396 (11%)
Query: 58 NKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPC-DHAVQLDLIGRVHGFLS 116
N+ LQ+I R++ + K LEV + I FA D L+ +G V G
Sbjct: 248 NRANSSILQKIYREIDRDK-----LEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQG--- 299
Query: 117 AESYFSNLKDDEKTYQTY-GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCL 175
S L T T L NC +T++A + F +M++ G+ T YN ++
Sbjct: 300 -----SGLSVKTATLVTVIWGLGNC----GRTEEAEAIFEEMRDNGLQPRTRAYNALLRG 350
Query: 176 YSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPH 232
Y K G V++EM+ + P+ +Y + I++YG E I+L+EME+ QP+
Sbjct: 351 YVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPN 410
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
+ AS Y K VL++ E+ + D I YN LI + +
Sbjct: 411 AYVFSRILAS----YRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAM 466
Query: 293 RLWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
+D I D I T+++ K G+H+ AE++ +E G N +I
Sbjct: 467 ATFD---RMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMI 523
Query: 350 IGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQC---MKAALSV 406
+ + + + +L ++ +G ++ + Y +G+ + +C MKAA
Sbjct: 524 NSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAA--- 580
Query: 407 YVEGKGWKPDPKVITSILSKLGDEG-SVQDVEAFVA 441
G KP + ++L+ G S Q V AF A
Sbjct: 581 -----GLKPSSTMYNALLNAYAQRGLSDQAVSAFWA 611
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 36/245 (14%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L++ + + D A++ F +M GI T+T+N ++ + K G++++ ++ EM
Sbjct: 449 YNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMM 508
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
K P N ++ I INS+G + + ++ +L M SQ ++ + TY + Y K+
Sbjct: 509 EKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQ-GLLPNAVTYTTLIDIYGKSGRF 567
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLG-NKSEVLRLW----------------- 295
D A + L + + YN L++ YA G + V W
Sbjct: 568 DDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSL 627
Query: 296 ---------DLEKTACKRYINRD--------YITMLEALMKLGEHEEAEKVLKEWELSGN 338
D+E +Y+ + Y T+++AL+ + + ++ V +E LSG
Sbjct: 628 INAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMILSGC 687
Query: 339 SYDTR 343
+ D +
Sbjct: 688 TPDRK 692
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 9/245 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG L+N + T A+ R M + + + YN I+ K Q + ++ +EM
Sbjct: 219 TYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEM 278
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
K I PD F+Y I++ + + + +L EM + P++V+ +ST A K
Sbjct: 279 ITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV-FSTVVDA---LCK 334
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINR 308
+I A DV+ +R + D + Y L+ + E ++++D + C + R
Sbjct: 335 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV-R 393
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ ++ ++A +L++ L G DT N +I G C+ G +Q+A A+ ++
Sbjct: 394 SYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM 453
Query: 369 VEKGK 373
V G+
Sbjct: 454 VASGQ 458
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 14/281 (4%)
Query: 148 DKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRIC 207
D ALS F +M M ST+ + ++ +K Y V + T+M + I PD ++ I
Sbjct: 94 DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNIL 153
Query: 208 INSYGARSDLE-GMEII--LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAE 264
INS+ L ++ L ++ QP D +T+ + I +A + K
Sbjct: 154 INSFCHLRRLGYAFSVLAKLLKLGCQP----DNTTFNTLIRGLCVEGKIGEALHLFDKTI 209
Query: 265 ERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEH 323
Q D + Y L++ +GN S +RL + + C+ + Y T++++L K +
Sbjct: 210 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNV-IAYNTIIDSLCKDRQV 268
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVV 383
EA + E G S D N++I CN ++ +L ++V PN VV
Sbjct: 269 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN--SKIMPN--VVV 324
Query: 384 AAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+ DA E + + ++ +G +PD T+++
Sbjct: 325 FSTVVDALCKEGMIAIAHDVVDMMIK-RGVEPDVVTYTALM 364
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
++Y L+N Y + ++ DKA+ +M G+ T+TYN ++ G+ + + E
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M A PD +YRI ++ L ++L+ +E ++ D Y A +A
Sbjct: 453 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS-NLDADILVYNIAIDGMCRAG 511
Query: 252 LIDKASDVLK 261
++ A D+
Sbjct: 512 ELEAARDLFS 521
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 1/152 (0%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E TY AL++ + + + D+A+ F M G + +YN ++ Y + + +K
Sbjct: 354 EPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMG 413
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
+L +M + + D +Y I+ L+ + EM + I D TY +
Sbjct: 414 LLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP-DLVTYRILLDYL 472
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
K + + +A +LK E D + YN I
Sbjct: 473 CKNHHLAEAMVLLKAIEGSNLDADILVYNIAI 504
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 180/440 (40%), Gaps = 28/440 (6%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK-- 125
II L K R +A + M +GI F +D + +V AE F +
Sbjct: 397 IINSLFKSGRVMEAFNLQSQMVVRGIS-FDIVTCTTVMDGLFKVGKTKEAEEVFETILKL 455
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+ TY ALL+ Y + + + A +KM++ + + +T++ I+ Y+K G K
Sbjct: 456 NLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKA 515
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES----QPHIVLDWSTYA 241
DVL EM +N+ P+ Y I I+ Y + + + +EM+S + +++ D
Sbjct: 516 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDI---- 571
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
+ + +D+A ++ + D + Y LI Y GN+ L + K
Sbjct: 572 -LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEK 630
Query: 302 CKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA 361
R+ Y +++ L++LG+++ + EL G + D N +I YC G ++A
Sbjct: 631 NIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIEL-GLAPDCITYNTIINTYCIKGKTEDA 689
Query: 362 EAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP---K 418
IL ++ G ++ ++ G G E+ + L + + P P K
Sbjct: 690 LDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVM-----EFVPTPITHK 744
Query: 419 VITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMK 476
+ S+ + + + A + + ++ +Y+ I R G + +LD M
Sbjct: 745 FLVKAYSRSEKADKILQIHEKLVA--SGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMV 802
Query: 477 ADGIDEDEETKEILV---CT 493
GI D T L+ CT
Sbjct: 803 KRGISADLVTYNALIRGYCT 822
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 153/370 (41%), Gaps = 22/370 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +L++ Y ++ ALS ++MKE I + YN ++ + G+Y+ V + M
Sbjct: 604 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDP-RYVCSRMI 662
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ PD +Y IN+Y + E IL EM+S I+ + TY K +
Sbjct: 663 ELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSY-GIMPNAVTYNILIGGLCKTGAV 721
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITM 313
+KA L + I + FL+ Y+ ++L++ + + Y T+
Sbjct: 722 EKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTL 781
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
+ +LG +A+ VL E G S D NA+I GYC V+ A + G
Sbjct: 782 ITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGI 841
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
A ++ + G +AG E + + +S E +G P+ ++S G G+
Sbjct: 842 APNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNE-RGLVPNAATYDILVSGYGRVGNR 900
Query: 434 QD---------VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDE 482
+ + FV L+T Y+ I ++GK ++ ELL+ + G
Sbjct: 901 KKTIILHIEMITKGFVPTLKT--------YNVLISDYAKSGKMIEARELLNDLLTKGRIP 952
Query: 483 DEETKEILVC 492
+ T +IL C
Sbjct: 953 NSFTYDILTC 962
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 155/360 (43%), Gaps = 30/360 (8%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+ + +Y ++N + + +A + +M GI+ +T +M K G+ ++ +
Sbjct: 388 DPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEE 447
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
V + N+ P+ +Y ++ Y +E E++L++ME + H+ + T++S + Y
Sbjct: 448 VFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKE-HVPPNVITFSSIINGY 506
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
K ++ KA DVL++ +R + I Y LI Y G + D+ CK +
Sbjct: 507 AKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQ-------DVADDFCKEMKS 559
Query: 308 RD-------YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
R + +L L ++G +EA ++ + G D ++I GY G
Sbjct: 560 RRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLA 619
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI 420
A +I++++ EK ++ + G GK + + C S +E G PD
Sbjct: 620 ALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVC-----SRMIE-LGLAPDCITY 673
Query: 421 TSILSKLGDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIKANIRNG------KGVDELL 472
+I++ +G +D + +++ ++P N Y+ I + G +DE+L
Sbjct: 674 NTIINTYCIKGKTEDALDILNEMKSYGIMP-NAVTYNILIGGLCKTGAVEKAESALDEML 732
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 98/499 (19%), Positives = 193/499 (38%), Gaps = 62/499 (12%)
Query: 2 IPKLKLSTNTQIHNAVFS------RFYYTNRINKTTLYSIISPLGNPGTRIEPELDNWVK 55
+ K+++ TNT I FS RF+Y I +T S + I P
Sbjct: 6 LKKIRVQTNTLIF--FFSPPTRLRRFFYPTPITRT----FSSQIHKDSIFIPP------- 52
Query: 56 NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAV--QLDLIGRVH- 112
+ V +IR RFS A M G+ P + + Q + G V
Sbjct: 53 TKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQ 112
Query: 113 -GFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYND 171
+ ++ F + D + L++ + D AL + R + I +TYN
Sbjct: 113 VKLMYSDMLFCGVVPD---VFSVNVLVHSLCKVGDLDLALGYLRNNDVVDI--DNVTYNT 167
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP 231
++ + + G ++ +L+EM + + D+ + I + Y ++ E ++ +
Sbjct: 168 VIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNL-VDG 226
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKS-- 289
+ D + Y +A L+ +A+++++ + + D + YN L+ + G+ +
Sbjct: 227 GVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRA 286
Query: 290 -----EVLRLWDLEKTACKRYINRD----------------YITMLEALMKLGEHEEAEK 328
E+L W E R N D Y T++ A K EE+
Sbjct: 287 ESLFNEILGFWKDED----RLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHS 342
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
+ K+ ++G D ++++ G+C +G + A + ++ E G S+A + F
Sbjct: 343 LYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLF 402
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-EAFVAALRTVI 447
+G+ F +++ + V +G D T+++ L G ++ E F L+ +
Sbjct: 403 KSGRVMEAFN-LQSQMVV----RGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNL 457
Query: 448 PMNRQMYHAFIKANIRNGK 466
N Y A + + GK
Sbjct: 458 APNCVTYSALLDGYCKLGK 476
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 119/302 (39%), Gaps = 52/302 (17%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++N Y + +T+ AL +MK GI + +TYN ++ KTG EK L EM
Sbjct: 672 TYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEM 731
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
P +++ + +Y +RS+ + + E + L + Y + + + +
Sbjct: 732 LVMEFVPTPITHKFLVKAY-SRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGM 790
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN----- 307
KA VL + +R D + YN LI Y + + + L KT + +++
Sbjct: 791 TRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKAL------KTYSQMFVDGIAPN 844
Query: 308 -RDYITMLEALMKLG----EHEEAEKVLKEWELSG-----NSYDTRIP------------ 345
Y T+L L G EE EK++ E G +YD +
Sbjct: 845 ITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTI 904
Query: 346 ------------------NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
N +I Y +G + A +L DL+ KG+ ++ ++ G+
Sbjct: 905 ILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGW 964
Query: 388 FD 389
+
Sbjct: 965 LN 966
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 134/291 (46%), Gaps = 21/291 (7%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
MKE GI L+ TYN ++ K+G + +V M + P +Y + + ++G R D
Sbjct: 151 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 210
Query: 217 LEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGI 273
+E + +LREME+ +P++ +Y +A D+A +L K E + D I
Sbjct: 211 VETVLWLLREMEAHGVKPNVY----SYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVI 266
Query: 274 GYNFLISLYASLGNKSEVLRL-WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
+ LI + G S+ + W ++K+ K D +T + L K G++ +++ V++
Sbjct: 267 THTVLIQVLCDAGRISDAKDVFWKMKKSDQK----PDRVTYITLLDKFGDNGDSQSVMEI 322
Query: 333 WE-LSGNSYDTRIP--NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
W + + Y+ + AVI C G V A + +++ +KG S+ + +G+
Sbjct: 323 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 382
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG-SVQDVEAF 439
A + + K +++ G KP+ ++ G G S++ ++ +
Sbjct: 383 ADRFGDALELFK-----HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 428
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 146/365 (40%), Gaps = 15/365 (4%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY 131
+R R EV D M R+ I A +G G SA +K+
Sbjct: 100 MRGHGRVGDMAEVFDVMQRQ-IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVL 158
Query: 132 Q--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
TY L+ V+ +AL +R M G+ S TY+ +M + K E V +L
Sbjct: 159 NAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLL 218
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHF 246
EM+A + P+ +SY ICI G + IL +ME++ P ++ T+
Sbjct: 219 REMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVI----THTVLIQV 274
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
A I A DV K ++ ++ D + Y L+ + G+ V+ +W+ K
Sbjct: 275 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDN 334
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y +++AL ++G EA ++ E + G + N++I G+ +A + +
Sbjct: 335 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 394
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ G + + Y +G++ + Q + ++ KG PD ++L
Sbjct: 395 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYE-----LMKSKGIVPDVVAGNAVLFG 449
Query: 427 LGDEG 431
L G
Sbjct: 450 LAKSG 454
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 134/335 (40%), Gaps = 44/335 (13%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L+ +Q++ +A +K K G++L T YN ++C + + EMK
Sbjct: 726 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 785
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
PD F+Y + +++ G +E M + EM + Y S Y+ N I
Sbjct: 786 CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRK--------GYEST---YVTYNTI--I 832
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
S ++K RLEQ + YN + ++ T C Y +L+
Sbjct: 833 SGLVK--SRRLEQAIDLYYNLMSQGFSP---------------TPCT------YGPLLDG 869
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
L+K G E+AE + E G + I N ++ G+ G + + +D+V++G
Sbjct: 870 LLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 929
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV 436
S+ ++ AG+ G + L + G +PD ++ LG +++
Sbjct: 930 IKSYTIIIDTLCKAGQLNDGLTYFRQLLEM-----GLEPDLITYNLLIDGLGKSKRLEEA 984
Query: 437 EAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVD 469
+ + + ++P N Y++ I + GK +
Sbjct: 985 VSLFNEMQKKGIVP-NLYTYNSLILHLGKAGKAAE 1018
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 174/450 (38%), Gaps = 48/450 (10%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY------- 120
+I L + R +ALE+ D M +KGI Q + GFL A+ +
Sbjct: 341 VIDALCQVGRVFEALEMFDEMKQKGIV-------PEQYSYNSLISGFLKADRFGDALELF 393
Query: 121 -FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
++ + T+ +N Y + ++ KA+ + MK GI + N ++ +K+
Sbjct: 394 KHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 453
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWS 238
G+ V E+KA + PD +Y + I S E ++I +E+ + V D
Sbjct: 454 GRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN--NCVPDVL 511
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEE-RLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
S KA D+A + + +E LE DG YN L++ G EV+ L L
Sbjct: 512 AVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGT-YNTLLAGLGREGKVKEVMHL--L 568
Query: 298 EKTACKRYINR--DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNN 355
E+ Y Y T+L+ L K G +A +L G D N VI G
Sbjct: 569 EEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKE 628
Query: 356 GLVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSV---YVEG 410
A +I + K P+ + + + G MK AL + Y
Sbjct: 629 ERYNEAFSI---FCQMKKVLIPDYATLCTILPSFVKIG-------LMKEALHIIKDYFLQ 678
Query: 411 KGWKPD----PKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK 466
G K D ++ IL K G E S++ E + + I ++ IK + K
Sbjct: 679 PGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIAS---SGITLDDFFLCPLIKHLCKQKK 735
Query: 467 GVD--ELLDSMKADGIDEDEETKEILVCTM 494
++ EL+ K+ G+ L+C +
Sbjct: 736 ALEAHELVKKFKSFGVSLKTGLYNSLICGL 765
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 169/439 (38%), Gaps = 59/439 (13%)
Query: 56 NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFL 115
+G K V IR L + KRF +A + M +G C H V + ++
Sbjct: 224 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG-CKPDVITHTVLIQVLCDAGRIS 282
Query: 116 SAESYFSNLK--DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A+ F +K D + TY LL+ + + + + MK G + + Y ++
Sbjct: 283 DAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVI 342
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
+ G+ + ++ EMK K I P+ +SY I+
Sbjct: 343 DALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG----------------------- 379
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
++KA+ A ++ K + + +G + I+ Y G + ++
Sbjct: 380 -------------FLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 426
Query: 294 LWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
++L K+ + I D + +L L K G A++V E + G S DT I ++I
Sbjct: 427 RYELMKS---KGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDT-ITYTMMI 482
Query: 351 GYCNNGL-VQNAEAILEDLVEKGKATTPNSWAV--VAAGYFDAGKTERGFQCMKAALSVY 407
C+ A I D++E P+ AV + + AG+ + ++ +
Sbjct: 483 KCCSKASKFDEAVKIFYDMIENN--CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMN 540
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGK 466
+E P ++L+ LG EG V++V + + + P N Y+ + +NG
Sbjct: 541 LE-----PTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGA 595
Query: 467 GVD--ELLDSMKADGIDED 483
D ++L SM G D
Sbjct: 596 VNDALDMLYSMTTKGCIPD 614
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 5/256 (1%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K E TY TY +++ V+ R+ ++A+ + + G + + TY ++ K G+ E
Sbjct: 819 KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIED 878
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
++ EM + Y I +N + + E + + ++M Q I D +Y
Sbjct: 879 AENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ-GINPDIKSYTIII 937
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACK 303
KA ++ ++ E + D I YN LI E + L+ +++K
Sbjct: 938 DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 997
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ Y +++ L K G+ EA K+ +E G + NA+I GY +G +A A
Sbjct: 998 PNL-YTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYA 1056
Query: 364 ILEDLVEKGKATTPNS 379
++ G PNS
Sbjct: 1057 AYGRMIVGG--CLPNS 1070
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 158/404 (39%), Gaps = 21/404 (5%)
Query: 51 DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICV--FAPCDHAVQLDLI 108
D +++ G+K ++ + K+ +++E ++ + GI + F C L
Sbjct: 674 DYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHL--- 730
Query: 109 GRVHGFLSAESYFSNLKDDEKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
+ L A K + +T Y +L+ V + D A F +MKE+G
Sbjct: 731 CKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 790
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
TYN ++ K+ + E++ V EM K +Y I+ LE +
Sbjct: 791 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 850
Query: 227 MESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLG 286
+ SQ TY +KA I+ A ++ + E + + YN L++ + G
Sbjct: 851 LMSQ-GFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 909
Query: 287 NKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
N +V L+ + + IN D Y +++ L K G+ + ++ G D
Sbjct: 910 NTEKVCHLF---QDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 966
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAA 403
N +I G + ++ A ++ ++ +KG ++ + AGK + +
Sbjct: 967 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1026
Query: 404 LSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVI 447
L+ KGWKP+ +++ GS A+ A R ++
Sbjct: 1027 LT-----KGWKPNVFTYNALIRGYSVSGSTD--SAYAAYGRMIV 1063
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 146/365 (40%), Gaps = 51/365 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+NC+ + + ++A S+F +MK G+ + +T++ + + K G + + +M
Sbjct: 266 TYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQM 325
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ K + P+ +Y ++ L+ ++ EM Q + L+ TY K
Sbjct: 326 RMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQ-GVPLNVVTYTVLVDGLCKEGK 384
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ +A DV RL ++ GI N L+ Y T
Sbjct: 385 VAEAEDVF-----RLMERAGIRANELL------------------------------YTT 409
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ E A +L E + G D + A+I G CN + A+++L + E G
Sbjct: 410 LIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECG 469
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
+ + F A K ++ + G++P+ +++ L GS
Sbjct: 470 LKPNNVIYTNIMDACFKARKESEAIALLQKMMD-----SGFRPNIVTYCALVDGLCKAGS 524
Query: 433 VQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETKE 488
+ + + F + + N Q Y A + +NG+ +D+ LLD M G+ D
Sbjct: 525 IDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGR-LDKAVLLLDEMIDKGMSLDN---- 579
Query: 489 ILVCT 493
+VCT
Sbjct: 580 -VVCT 583
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 108/270 (40%), Gaps = 11/270 (4%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+T +L C R+R ++ A F ++ A + T+N ++ K G + +L
Sbjct: 164 RTCNHILLCLARERSSELAWRLFEQLP----APNVFTFNIMIDFLCKEGDLAEARALLAR 219
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME---SQPHIVLDWSTYASAAHFYI 248
MKA PD +Y I+ YG +LE +E ++ EM +P +V TY + + +
Sbjct: 220 MKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVV----TYNALVNCFC 275
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K +++A + + + + ++ + + G E ++L+ + +
Sbjct: 276 KFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEV 335
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y +++ K G ++A + E G + ++ G C G V AE + +
Sbjct: 336 TYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLM 395
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
G + + G+F +ER
Sbjct: 396 ERAGIRANELLYTTLIHGHFVYKNSERALS 425
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 130/339 (38%), Gaps = 57/339 (16%)
Query: 51 DNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGR 110
+ V+ G + V ++ L K + ++A +V M R GI A +L
Sbjct: 358 NEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGI-------RANELLYTTL 410
Query: 111 VHGFL------SAESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+HG A S S +KD E YGAL+ ++ D+A S KM E G+
Sbjct: 411 IHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGL 470
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+ + Y +IM D + AR + E + +
Sbjct: 471 KPNNVIYTNIM-------------DA---------------------CFKARKESEAIAL 496
Query: 223 ILREMES--QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
+ + M+S +P+IV TY + KA ID+A K + + + Y L+
Sbjct: 497 LQKMMDSGFRPNIV----TYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVD 552
Query: 281 LYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
G + + L D N ++++ +K G ++A + + SG
Sbjct: 553 GLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQL 612
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
D + G+CN ++Q A +L +++E G TP++
Sbjct: 613 DLYGYTCFVWGFCNLNMIQEAREVLSEMIENG--ITPDA 649
>gi|255661188|gb|ACU25763.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 426
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 182/437 (41%), Gaps = 79/437 (18%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRV-GEL---QRIIRDLRKRKRFSQALE 83
++ T ++I+ G G + L +W++ + RV G+L +I RK +S+A+
Sbjct: 8 DRYTYSTLITHFGKEGL-FDAAL-SWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 84 VSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT--YGALLN 139
+ + R G F P + +++ G+ F A S S ++ T Y LL
Sbjct: 66 IFSRLKRSG---FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLT 122
Query: 140 CYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP 199
YV ++ +ALS F +M+E+ L T N ++ +Y + G ++ + M+ I P
Sbjct: 123 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 200 DNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
+ SY + YG ++L G I L + + +IV + TY S Y K +KA+++
Sbjct: 183 NVVSYNTLLRVYG-DAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
+++ + R + + I Y+ +IS++ K
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWG-----------------------------------K 266
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
+G+ + A + ++ SG D + +I+ Y GLV +A+ +L +L K P
Sbjct: 267 VGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHEL--KSPDNIPRD 324
Query: 380 WAV-VAAG-------------YFDAGKTE--RGFQCMKAALSVY------------VEGK 411
A+ + AG DAG+ + F+ M S Y + G
Sbjct: 325 TAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANLIEVFDKMRGL 384
Query: 412 GWKPDPKVITSILSKLG 428
G+ PD VI +L+ G
Sbjct: 385 GYFPDSNVIALVLNAYG 401
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 146/347 (42%), Gaps = 58/347 (16%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LL ++R R +D+A + + +M G L YN ++ +K Q ++ V +M
Sbjct: 241 TYRCLLQAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDM 300
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
K K+ PD ++Y I I G E + EM ++ P+++ Y + K
Sbjct: 301 KLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLI----AYNTMIQALSK 356
Query: 250 ANLIDKA----SDVLKK-----------------AEERLEQKDGIG-----------YNF 277
+ ++DKA +++K AE +L + D + Y +
Sbjct: 357 SGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKSIYAY 416
Query: 278 LISLYASLGNKSEVLRL----WDLEKTACKRYINRD-YITMLEALMKLGEHEEAEKVLKE 332
L+ + LG+ SE RL W +RD YI+MLE+L + G+ EA ++L +
Sbjct: 417 LVRTLSKLGHSSEAHRLFCNMWSFHDGG-----DRDAYISMLESLCRGGKTVEAIELLSK 471
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
G S DT + N V+ V + + E + + G ++ ++ + GK
Sbjct: 472 VHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGK 531
Query: 393 TERGFQCMKAALSVY--VEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
+K A+ V+ +E KPD S+++ LG G V +
Sbjct: 532 -------VKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAH 571
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Query: 108 IGRVHGFLSAESYFSNLK--DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
+GRV A F L+ D + +Y +L+NC + D+A F +M++ G+
Sbjct: 526 LGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPD 585
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI---CINSYGARSDLEGMEI 222
+TY+ ++ + KT + E + M + P+ +Y I C+ G ++ +
Sbjct: 586 VVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYA 645
Query: 223 ILREMESQPHIVLDWSTYA 241
LRE P D TYA
Sbjct: 646 KLREQGLTP----DSITYA 660
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ C+ + + + A S F +M G + +TYN ++ + G+ + D+ ++
Sbjct: 588 TYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKL 647
Query: 193 KAKNIFPDNFSYRI 206
+ + + PD+ +Y I
Sbjct: 648 REQGLTPDSITYAI 661
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 144/364 (39%), Gaps = 16/364 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++ ++R R+ K + +M G L YN ++ +K G ++ V +M
Sbjct: 188 TYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVFEDM 247
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K K PD ++Y I I G EM S+ L+ Y + K +
Sbjct: 248 KQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSR-GCALNLIAYNTVIEALGKNKM 306
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-YI 311
+DK VL K E Q + Y+ + + A+ G + + D+ C RY+N+ Y
Sbjct: 307 VDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEVLDI----CDRYLNKSIYS 362
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
++++L K G EA V S S D +++ CN+G A +L + EK
Sbjct: 363 YLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEK 422
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
G T + +V + GK ++ + L ++ G PD ++S G G
Sbjct: 423 GIDTDIGMYNMVFSAL---GKLKQ--VSFISTLFDKMKASGIAPDLFTYNIMISSYGRVG 477
Query: 432 SVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETK 487
V + + + Y+ I +NG +DE L M+ G D D T
Sbjct: 478 LVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGD-LDEAHILFKEMQEKGYDPDVFTY 536
Query: 488 EILV 491
L+
Sbjct: 537 STLI 540
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y + + + +Q + F KMK GIA TYN ++ Y + G +K + EM+
Sbjct: 431 YNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEME 490
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
A + PD +Y IN G DL+ I+ +EM+ + + D TY++ + K+N +
Sbjct: 491 ASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDP-DVFTYSTLIECFGKSNKV 549
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEK 299
D A + + + + YN L+ G +E + ++ K
Sbjct: 550 DMACSLFDEMIAEGCIPNIVTYNILLDCLERRGKTAEAHKHYETMK 595
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 11 TQIHNAVFSRFYYTNRI-NKTTLYSIISPLGNPGTRIEP--ELDNWVKNGNKVRVGELQR 67
++ HN VF R + ++ ++ S++ L N G +E L + G +G
Sbjct: 375 SEAHN-VFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNM 433
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYF---- 121
+ L K K+ S + D M GI AP + + + GRV A F
Sbjct: 434 VFSALGKLKQVSFISTLFDKMKASGI---APDLFTYNIMISSYGRVGLVDKASGLFEEME 490
Query: 122 -SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
S+ K D TY T L+NC + D+A F++M+E G TY+ ++ + K+
Sbjct: 491 ASSCKPDVITYNT---LINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSN 547
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
+ + + EM A+ P+ +Y I ++
Sbjct: 548 KVDMACSLFDEMIAEGCIPNIVTYNILLD 576
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 80 QALEVSDWMNRKGICVFAPCDHAVQL-DLIGRVHGFLSAESYFSNLKDDEKTYQ------ 132
+A+++ M KGI D + + +++ G L S+ S L D K
Sbjct: 411 EAIDLLHMMPEKGI------DTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLF 464
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ Y R DKA F +M+ +TYN ++ K G ++ + EM
Sbjct: 465 TYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEM 524
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIV 234
+ K PD F+Y I +G + ++ + EM ++ P+IV
Sbjct: 525 QEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIV 569
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ C+ + + D A S F +M G + +TYN ++ + G+ + M
Sbjct: 535 TYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLERRGKTAEAHKHYETM 594
Query: 193 KAKNIFPDNFSYRI 206
K + + PD+ +Y I
Sbjct: 595 KQQGLTPDSITYSI 608
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 156/367 (42%), Gaps = 50/367 (13%)
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+ TY L++ + ++ +++LS ++ G+ + + Y +M K G+ ++ D+
Sbjct: 314 HVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFR 373
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFY 247
+ N P+ +Y + I++ +++G E +L EME + P++V T++S +
Sbjct: 374 HALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVV----TFSSIINGL 429
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
+K + KA+D +++ +ER GI N +
Sbjct: 430 VKRGWVGKATDYMREMKER-----GIDPNVVT---------------------------- 456
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y T+++ K E A V E G + I ++++ G NG ++ AEA+ +
Sbjct: 457 --YGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFRE 514
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+ E+G ++ + G F G F+ + + K PD V ++ L
Sbjct: 515 MNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQE-----LTEKNLLPDAVVYNVFINCL 569
Query: 428 GDEGSVQDVEAFVAALR-TVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDE 484
G ++ E+F+ ++ T + ++ Y+ I A R GK +LL+ MK I +
Sbjct: 570 CMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNL 629
Query: 485 ETKEILV 491
T L+
Sbjct: 630 ITYSTLI 636
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 116/278 (41%), Gaps = 3/278 (1%)
Query: 101 HAVQLDLIGRVHGFLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
+ V +D + + AE S + K T+ +++N V++ KA + R+MK
Sbjct: 387 YTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMK 446
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
E GI + +TY ++ K E DV EM + + + F +N +E
Sbjct: 447 ERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIE 506
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
E + REM + ++LD Y + K + A V ++ E+ D + YN
Sbjct: 507 KAEALFREMNER-GVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVF 565
Query: 279 ISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGN 338
I+ LG E + ++ + Y TM+ A + G+ +A K+L + S
Sbjct: 566 INCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSI 625
Query: 339 SYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
+ + +I+G G V+ A+ +L ++ G + T
Sbjct: 626 KPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPT 663
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 102/230 (44%), Gaps = 8/230 (3%)
Query: 66 QRIIRDLRKRKRFSQALEVSDWMNRKGIC----VFAPCDHAVQLDLIGRVHGFLSAESYF 121
+R+++ + +R LE+ +WM G+C V+ + + + R + E
Sbjct: 668 RRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSG 727
Query: 122 SNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
+ D T+ AL+ + + D A S + +M GI+ + T+N ++ G+
Sbjct: 728 RGIAPDTITFN---ALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGR 784
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYA 241
+ VL EMK + I P N +Y I + YG +S+ + EM + + STY
Sbjct: 785 IGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLP-KVSTYN 843
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV 291
+ + K ++ +A ++ + + R Y+ L+S ++ L N +EV
Sbjct: 844 ALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEV 893
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 123/301 (40%), Gaps = 8/301 (2%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
+L+N + + +KA + FR+M E G+ L + Y ++ KTG V E+ K
Sbjct: 494 SLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEK 553
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
N+ PD Y + IN + E L EM+S + D TY + + K
Sbjct: 554 NLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQST-GLKPDQVTYNTMIAAQSREGKTAK 612
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLE 315
A +L + + + I Y+ LI G + L + ++ + + +L+
Sbjct: 613 ALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQ 672
Query: 316 ALMKLGEHEEAEKVLKEWEL-SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKA 374
A + G + + EW + +G D + N ++ C NG+ + A +LE++ +G A
Sbjct: 673 ACSQ-GRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIA 731
Query: 375 TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ 434
++ + G+F +G + F L G P+ ++L L G +
Sbjct: 732 PDTITFNALILGHFKSGHLDNAFSTYDQMLY-----HGISPNVATFNTLLGGLESAGRIG 786
Query: 435 D 435
+
Sbjct: 787 E 787
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 181/442 (40%), Gaps = 48/442 (10%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVH--GFLSA------ES 119
++ L+K + +A + MN +G+ + DH LI + G L A E
Sbjct: 495 LVNGLKKNGKIEKAEALFREMNERGVLL----DHVNYTTLIDGLFKTGNLPAAFKVGQEL 550
Query: 120 YFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
NL D Y + +NC ++ +A S +M+ G+ +TYN ++ S+
Sbjct: 551 TEKNLLPDAVVYNVF---INCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSRE 607
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
G+ K +L MK +I P+ +Y I +E + +L EM S +S
Sbjct: 608 GKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSS-----GFSP 662
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQ----KDGIGYNFLISL--YASLGNKSEVLR 293
+ ++A + SD++ + E + D YN L+ + Y + K+ V+
Sbjct: 663 TSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVV- 721
Query: 294 LWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
LE+ + R I D IT ++ K G + A + G S + N ++
Sbjct: 722 ---LEEMS-GRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLG 777
Query: 351 GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVE- 409
G + G + ++ +L ++ ++G + ++ ++ GY GK + A+ +Y E
Sbjct: 778 GLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGY---GKQSNKVE----AVRLYCEM 830
Query: 410 -GKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIK--ANIRN 464
GKG+ P +++S G + + + R V+P + Y + + +RN
Sbjct: 831 VGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTS-CTYDILVSGWSKLRN 889
Query: 465 GKGVDELLDSMKADGIDEDEET 486
G V + L MK G + T
Sbjct: 890 GTEVRKFLKDMKEKGFSPSKGT 911
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 143/343 (41%), Gaps = 45/343 (13%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ +L++ Y + + A + +MK G+ + + YN ++ + G+ + D++ MK
Sbjct: 177 WNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMK 236
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
+ P+ +Y + I Y R+ ++ + EM + ++ D T ++ K
Sbjct: 237 RDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEM-VRKGVLPDVVTLSALVGGLCKDGRF 295
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---Y 310
+A + ++ E+ + + Y LI A +E L L R + D Y
Sbjct: 296 SEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLG---EVVSRGVVMDLIMY 352
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII-GYCNNGLVQNAEAILEDLV 369
+++ L K G+ +EA+ + + LS N + V+I C G V AE +L ++
Sbjct: 353 TALMDWLCKEGKIDEAKDMFRH-ALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEME 411
Query: 370 EKGKATTPN--------------SWAVVAAGYFDAGKTERG---------------FQCM 400
E K+ +PN W A Y K ERG F+C+
Sbjct: 412 E--KSISPNVVTFSSIINGLVKRGWVGKATDYMREMK-ERGIDPNVVTYGTVIDGSFKCL 468
Query: 401 --KAALSVYVE--GKGWKPDPKVITSILSKLGDEGSVQDVEAF 439
+AAL VY E +G + + ++ S+++ L G ++ EA
Sbjct: 469 GQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEAL 511
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 138/338 (40%), Gaps = 20/338 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+I L K +R +++L + + +G+ V + +D + + A+ F + D
Sbjct: 320 LIDTLAKAQRGNESLSLLGEVVSRGV-VMDLIMYTALMDWLCKEGKIDEAKDMFRHALSD 378
Query: 128 EKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
T TY L++ + D A +M+E I+ + +T++ I+ K G K
Sbjct: 379 NHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKA 438
Query: 186 PDVLTEMKAKNIFPDNFSYRICINS----YGARSDLEGMEIILREMESQPHIVLDWSTYA 241
D + EMK + I P+ +Y I+ G + L+ +L E ++D
Sbjct: 439 TDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVD----- 493
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEK 299
S + K I+KA + ++ ER D + Y LI GN ++ EK
Sbjct: 494 SLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEK 553
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
+ Y + L LG+ +EAE L+E + +G D N +I G
Sbjct: 554 NLLPDAVV--YNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTA 611
Query: 360 NAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTER 395
A +L + K + PN +++ + G F+AG E+
Sbjct: 612 KALKLLNGM--KRSSIKPNLITYSTLIVGLFEAGAVEK 647
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 131/314 (41%), Gaps = 34/314 (10%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E Y +++ + Q + AL + MK+MGI +TYN ++ +G +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDL-----EGMEIILREMESQPHIVLDWSTYAS 242
+L++M I PD ++ I+ YG L + E+I R + P+IV TY S
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV--NPNIV----TYNS 294
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTAC 302
+ L+D+A VL + + + YN LI+ Y + R+ D K C
Sbjct: 295 LINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYC------KAKRVDDGMKILC 348
Query: 303 KRYINRD--------YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
++RD Y T+ + + G+ AEKVL G D N ++ G C+
Sbjct: 349 --VMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD 406
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
+G + A LEDL + ++ ++ G A K E + L + KG
Sbjct: 407 HGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWY-----LFCSLALKGVS 461
Query: 415 PDPKVITSILSKLG 428
PD VIT I +G
Sbjct: 462 PD--VITYITMMIG 473
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 135/339 (39%), Gaps = 14/339 (4%)
Query: 100 DHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYG--ALLNCYVRQRQTDKALSHFRKM 157
D + L I +++ + + S F +L+ ++ Y L++C+ R + ALS KM
Sbjct: 81 DFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKM 140
Query: 158 KEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL 217
++G S +T+ ++ + ++ + ++ ++ P+ Y I+S + +
Sbjct: 141 MKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQV 200
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
+L+ M+ I D TY S + ++ +L D I ++
Sbjct: 201 NTALDVLKHMKKMG-IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSA 259
Query: 278 LISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWE 334
LI +Y G E + ++ +R +N + +T ++ L G +EA+KVL
Sbjct: 260 LIDVYGKEGQLLEAKKQYN---EMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G + N +I GYC V + IL + G ++ + GY AGK
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
+ + +S G PD +L L D G +
Sbjct: 377 AAEKVLGRMVSC-----GVHPDMYTFNILLDGLCDHGKI 410
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 99 CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
C H + LD +V L ++ +F N TY L+N Y + ++ D + M
Sbjct: 300 CIHGL-LDEAKKVLNVLVSKGFFPN-------AVTYNTLINGYCKAKRVDDGMKILCVMS 351
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
G+ T TYN + Y + G++ VL M + + PD +++ I ++
Sbjct: 352 RDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 138/333 (41%), Gaps = 15/333 (4%)
Query: 48 PELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDL 107
PE+D + + + ++ L K AL + ++M G+ ++V LD
Sbjct: 459 PEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSV-LDG 517
Query: 108 IGRVHGFLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALS 165
+ + L A + F + TY L++ + + D+AL KM E+G +
Sbjct: 518 LCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRAN 577
Query: 166 TLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILR 225
T+TY+ ++ K G+ E VL +M+ PD +Y I+ + R L +LR
Sbjct: 578 TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 637
Query: 226 EMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
EM P +V TY + H ++ D+A ++L R + I Y+ ++
Sbjct: 638 EMLEAGFHPSVV----TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGL 693
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNS 339
G +E L + EK A + Y +++ L K G +EA + L+ +G
Sbjct: 694 CKAGRVTEALGYF--EKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRI 751
Query: 340 YDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
D + +I G C+ G + + + E+G
Sbjct: 752 PDVVTFSILINGLCDAGRIDTGLELFCGMAERG 784
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 126/293 (43%), Gaps = 19/293 (6%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+ L + RF +A+E+ D+M +G C ++ +D + + A YF + D
Sbjct: 654 LCHGLCRSGRFDEAVEILDYMAARG-CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARD 712
Query: 128 EKTYQ---TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
E Y AL++ + + D+A +M G +T++ ++ G+ +
Sbjct: 713 EVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDT 772
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
++ M + D ++Y IN+Y + + +L EM++ I + T+
Sbjct: 773 GLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTH-GIAKNTVTHGIVI 831
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI-SLYASLGNKS--EVLRLWDLE--- 298
+ ID+A E + +D I YN LI SL AS ++ E+LR +
Sbjct: 832 KALCGNDRIDEAVSYFHSIPE--DCRDEISYNTLITSLVASRRSEQALELLRAMVADGGS 889
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIG 351
AC +Y+T+++ L K G E A K+L+E G+S D R +I G
Sbjct: 890 PDAC------NYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISG 936
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 13/262 (4%)
Query: 236 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
D T+ S K I A +V K+A ER + + + Y+ LI + + E L+L
Sbjct: 507 DVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLL 566
Query: 296 -DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
+ + C R Y T+++ L+K+G E+A VL++ +G D N +I G+
Sbjct: 567 AKMVELGC-RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 625
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
++ A +L +++E G + ++ + G +G+ + + + Y+ +G
Sbjct: 626 RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD-----YMAARGCA 680
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFV--AALRTVIPMNRQMYHAFIKANIRNGKGVD--- 469
P+ +SI+ L G V + + A V+ + Y A I + G+ +D
Sbjct: 681 PNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGR-IDEAY 739
Query: 470 ELLDSMKADGIDEDEETKEILV 491
E L+ M G D T IL+
Sbjct: 740 EFLERMIRAGRIPDVVTFSILI 761
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 101/250 (40%), Gaps = 7/250 (2%)
Query: 18 FSRFYYTNRINKTTLYSI-ISPLGNPGTRIEPELD---NWVKNGNKVRVGELQRIIRDLR 73
R RI +SI I+ L + G RI+ L+ + G K + +I
Sbjct: 742 LERMIRAGRIPDVVTFSILINGLCDAG-RIDTGLELFCGMAERGCKADIYAYNAMINAYC 800
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT 133
+ FS A + + M GI H + + + A SYF ++ +D + +
Sbjct: 801 LKGEFSAAYALLEEMKTHGI-AKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEIS 859
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L+ V R++++AL R M G + Y +M K G E +L EM+
Sbjct: 860 YNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMR 919
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
++ PD +Y I I+ L EM + ++ D Y+S + KA+ +
Sbjct: 920 SRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRK-NLKPDAIVYSSLIDAFCKADKV 978
Query: 254 DKASDVLKKA 263
D A +L+ +
Sbjct: 979 DDAWKLLRSS 988
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 102/273 (37%), Gaps = 4/273 (1%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY +++ R + DK +M G A + +TYN ++ G+ ++ +L
Sbjct: 35 TVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLL 94
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
M A P+ ++ + I ++E ++ EM + V D + H +
Sbjct: 95 ERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDR-GFVPDVEIHTVLLHALCE 153
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+D+A ++ D + YN ++ G + L +
Sbjct: 154 LGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFT 213
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+ ++ L K G A + +G S +T +A+I G C G + A +L D
Sbjct: 214 FTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD-- 271
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA 402
K +++ + G A + E Q +KA
Sbjct: 272 -KNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKA 303
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 138/368 (37%), Gaps = 27/368 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+N + + A + FRK + G + +TY+ ++ + + +K +L EM
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
+ P+ +Y +N+ + + +L M + P ++ T+ K
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELI----TFGLIIKGLCK 118
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
I+ A V+ + +R D + L+ LG E W + D
Sbjct: 119 EGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEA---WFFFQQVLLIGFTPD 175
Query: 310 ---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILE 366
Y TM++ L K G E A VL+ S +S + G G + A +
Sbjct: 176 AVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFD 235
Query: 367 DLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSK 426
+ + G + ++ + G AGK + ++ K + +S+L
Sbjct: 236 SMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLR--------DKNSQAGMFAFSSLLHG 287
Query: 427 LGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD---ELLDSMKADGIDED 483
L +++ + A+ V P N +++ + + + VD EL D MK G D
Sbjct: 288 LCQAHRLEEAIQLLKAMPCV-P-NVVCFNSLMNG-LCQARRVDEAFELFDVMKESGCSAD 344
Query: 484 EETKEILV 491
T IL+
Sbjct: 345 VITYNILL 352
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 131/333 (39%), Gaps = 37/333 (11%)
Query: 99 CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
C H + L + A +F + TYG +++ Y + + + A+ +M
Sbjct: 256 CSHNILLKALLSAGRLKDACQHFDEMSSPPDVV-TYGTMVHGYCVRGELENAVKLLDEMA 314
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
G+ + Y ++ L GQ VL +M + D + I+ + ++ DL
Sbjct: 315 AKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLA 374
Query: 219 GMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFL 278
+ EM+ + + D T+ + + +A + +A VL++ ++ D + Y L
Sbjct: 375 AARRLFEEMQKR-GLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVL 433
Query: 279 ISLYASLGNKSEVLRLWD----------------LEKTACK----RYINR---------- 308
I Y GN E R+ + L CK R N
Sbjct: 434 IDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGL 493
Query: 309 -----DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
Y +++ L K G E+A +++ E E +G+ D +I C +G A
Sbjct: 494 ELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHN 553
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
+L+++++KG + ++ V+ G+ +G+ E G
Sbjct: 554 MLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGG 586
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 105/221 (47%), Gaps = 7/221 (3%)
Query: 154 FRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGA 213
F +M++ G+A +T+ ++ + G+ ++ VL EM K + D +Y + I+ Y
Sbjct: 380 FEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCK 439
Query: 214 RSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
R ++ + EM + P++V TY + + K + A+++L + + +
Sbjct: 440 RGNMVEAFRVHNEMVGRRVAPNVV----TYTALSDGLCKQGDVRAANELLHEMCNKGLEL 495
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
+ YN LI+ GN + +R+ + A R Y T+++ L K GE + A +L
Sbjct: 496 NVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNML 555
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+E G N ++ G+C +G V+ + +LE ++EK
Sbjct: 556 QEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEK 596
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 150/354 (42%), Gaps = 36/354 (10%)
Query: 154 FRKMKEMGIALSTLTYNDIMC---LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
R++++ G++ S + N ++ L + ++PD KN+ N + +++
Sbjct: 216 LRRLRQYGLSPSPESCNAVLSRLPLDEAIALFRELPD-------KNVCSHNILLKALLSA 268
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
+ + + EM S P +V TY + H Y ++ A +L + + +
Sbjct: 269 GRLKDACQHFD----EMSSPPDVV----TYGTMVHGYCVRGELENAVKLLDEMAAKGLES 320
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWD---LEKTACKRYINRDYITMLEALMKLGEHEEAE 327
+ Y +I+L + G S+ LR+ + + A + + T++ G+ A
Sbjct: 321 NATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVV---FTTVISGFCSKGDLAAAR 377
Query: 328 KVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGY 387
++ +E + G + D A+I G C G ++ A+ +L+++V+KG ++ V+ GY
Sbjct: 378 RLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGY 437
Query: 388 FDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI--TSILSKLGDEGSVQDVEAFVAAL-R 444
G M A V+ E G + P V+ T++ L +G V+ + +
Sbjct: 438 CKRGN-------MVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCN 490
Query: 445 TVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILVCTMEK 496
+ +N Y++ I + G + ++ M+A G D T L+ T+ K
Sbjct: 491 KGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCK 544
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 19/260 (7%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y ++ +A +M +A + +TY + K G ++L EM
Sbjct: 429 TYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEM 488
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + + ++Y IN +LE I+ EME+ H D TY + K+
Sbjct: 489 CNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRT-DVYTYTTLIDTLCKSGE 547
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL--WDLEKTACKRYINRDY 310
D+A ++L++ ++ + YN L++ + G +L W LEK R
Sbjct: 548 FDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNV------RPN 601
Query: 311 ITMLEALMK-------LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ +LMK + E K + E++ N N +I G+C ++ A
Sbjct: 602 VVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTY---NILIKGHCKARNMKEALY 658
Query: 364 ILEDLVEKGKATTPNSWAVV 383
++++EKG T +S++ +
Sbjct: 659 FHQEMIEKGLRLTASSYSAL 678
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 155/380 (40%), Gaps = 49/380 (12%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
+LN + R+ DKA+ F +M MG + ++YN ++ + + ++ M
Sbjct: 26 VLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNG 85
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREM--ESQPHIVLDWSTYASAAHFYIKANLID 254
PD ++ I+ + + ++L + +P + L Y S H Y KA +D
Sbjct: 86 CEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFL----YTSVIHGYCKAGDLD 141
Query: 255 KASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTAC-KRYINRDYIT 312
+L++ D Y LI LG E L++ + K+ C Y+ ++T
Sbjct: 142 TGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVT--FMT 199
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++EAL G+ +EA ++ +E G + +++I C G V A I + +V K
Sbjct: 200 LIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKK 259
Query: 373 KATTPNSWAVVAAGYFDAGKTERGF-------QC---------------------MKAAL 404
AT+ ++ + GY G+ + G +C + AL
Sbjct: 260 VATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDAL 319
Query: 405 SVY--VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANI 462
++ + G KP+ T+I+ L D +++ +AF VI Y IK +
Sbjct: 320 ELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVIS-----YTTVIK-GL 373
Query: 463 RNGKGVD---ELLDSMKADG 479
+ K +D EL + +K G
Sbjct: 374 ADSKRIDEACELFEKLKTAG 393
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 168/391 (42%), Gaps = 39/391 (9%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRV--HGFL--SAESYFSN 123
+I L K R +A E+ + M + G C+ D+ + LI + HG L + E Y
Sbjct: 165 LIDPLCKLGRVDEAYELFERMRKSG-CLG---DYVTFMTLIEALSNHGKLDEACELYREM 220
Query: 124 LKDDEKTYQTY----GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
+ E+ Y+ Y +L+ + + D+A ++ + +A S + YN +M Y K
Sbjct: 221 I---ERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKL 277
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL-EGMEI--ILREMESQPHIVLD 236
G+ + +L +M + FPD +Y I + + + L + +E+ +L +P+
Sbjct: 278 GRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPN---- 333
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
+TY + A +++A +A D I Y +I A E L++
Sbjct: 334 AATYTTIIQGLYDAQRMEEAKAFFDEA------LDVISYTTVIKGLADSKRIDEACELFE 387
Query: 297 LEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE-LSGNS-YDTRIPNAVII-GYC 353
KTA Y +++ L+K G E+ LK +E +SG+S TR V+I G C
Sbjct: 388 KLKTAGCSPNVVAYTAVIDGLLKAGRIEDG---LKNFEDMSGSSCVPTRTTYTVVIDGLC 444
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
++ +A + E +V+KG ++ + G+ A K + + + L+ KG
Sbjct: 445 KAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT-----KGP 499
Query: 414 KPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
+P SI+ + + + +A +R
Sbjct: 500 EPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 530
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/369 (18%), Positives = 146/369 (39%), Gaps = 10/369 (2%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--K 125
+I L K + A +V + M +KG CV + +D + A + K
Sbjct: 439 VIDGLCKAQMLPDACKVFEQMVQKG-CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 497
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
E T TYG++++ + + ++A +M+E G + ++ Y G+ E+
Sbjct: 498 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 557
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
VLTEM A+ PD Y I+ + + + M + D TY +
Sbjct: 558 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM-IEKGCAPDALTYGTIIQ 616
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
+ K ++ A ++L+ + D YN L+ Y L + ++D + +
Sbjct: 617 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 676
Query: 306 INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII-GYCNNGLVQNAEAI 364
+ ++ L K G+ + A + KE T + ++I G G V A +
Sbjct: 677 NAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQ 736
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
++++++G +++ + AG+ + ++ + + G PD + ++++
Sbjct: 737 FQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL-----GVNPDVQAYSALI 791
Query: 425 SKLGDEGSV 433
+ L D V
Sbjct: 792 TGLIDSSMV 800
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 160/375 (42%), Gaps = 30/375 (8%)
Query: 53 WVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQL-DLIGRV 111
+ +NGN +V E+ ++R+ R + + +N K A++L D +G+
Sbjct: 274 YARNGNFEKVNEMFNLMRE---RGCEPDIVSFNTLINAKVKSCATVSGLAIELLDEVGKF 330
Query: 112 ---------HGFLSAESYFSNLKDDEKTYQ------------TYGALLNCYVRQRQTDKA 150
+ +SA S SNLK+ + TY A+++ Y R KA
Sbjct: 331 GLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKA 390
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
F K+K G + +TYN ++ +SK G EKV D+ EM D +Y I+
Sbjct: 391 EHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHM 450
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
YG + + R+M+S D TY KA+ I++AS V+ + + +
Sbjct: 451 YGKHGRHDEALRLYRDMKSSGRNP-DAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKP 509
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
Y+ LI YA +G + E ++ + + + + Y ML+ ++ E ++A +
Sbjct: 510 TLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALY 569
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
+E +G + DT + ++ + E +++D E G + +V+ G
Sbjct: 570 QEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKELGSMNPHDISSVLVKG---- 625
Query: 391 GKTERGFQCMKAALS 405
G + G + +K A+S
Sbjct: 626 GCYDHGAKMLKVAIS 640
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 144/360 (40%), Gaps = 19/360 (5%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T ++ LL + + + +++++M + +S + ++ +++ G +V V
Sbjct: 858 TVESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVY 917
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
MKA FP YR+ I + + ++L EM + D + S Y
Sbjct: 918 NGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEM-GEAGFKPDLQIFNSVLKLYSS 976
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ + ++ D YN LI++Y E L L K+
Sbjct: 977 IEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDT 1036
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +M+ A K +++AE++ +E +G D + ++ Y +G Q AE +LE +
Sbjct: 1037 YRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMK 1096
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTE------RGFQCMKAALSVYVEGKGWKPDPKVITSI 423
E G + ++ Y +G+ E + + M A L P VI +
Sbjct: 1097 EAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTL-------PYSSVIDAY 1149
Query: 424 LSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGID 481
L K GD + +E I + +++ FI+A +G+ D LL++++A G D
Sbjct: 1150 LKK-GDAKA--GIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLLNALQAVGFD 1206
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 137/333 (41%), Gaps = 26/333 (7%)
Query: 26 RINKTTLYSIISPLGNPGTRIEPE-LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEV 84
+I+K+++ ++ G E + + N +K L R++ L R F + +V
Sbjct: 891 KISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCR--FKRVRDV 948
Query: 85 SDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSN------------LKDDEKTYQ 132
++ G F P L + V S+ F N L DE+TY
Sbjct: 949 RVMLSEMGEAGFKP-----DLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYN 1003
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T L+ Y R + ++ LS KMK +G+ TY ++ +SK Y++ ++ E+
Sbjct: 1004 T---LITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEEL 1060
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
++ D Y + + Y D + E +L E+ + I + +T Y K+
Sbjct: 1061 RSNGYKLDRSFYHLMMKMYRTSGDHQKAENLL-EIMKEAGIEPNTATMHLLMVSYGKSGQ 1119
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN-KSEVLRLWDLEKTACKRYINRDYI 311
++A +LK D + Y+ +I Y G+ K+ + +L ++++ A + +R +
Sbjct: 1120 PEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAIEPD-HRIWT 1178
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRI 344
+ A GE +A +L + G R+
Sbjct: 1179 CFIRAASLSGEVNDANNLLNALQAVGFDLPIRL 1211
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 12/319 (3%)
Query: 74 KRKRFSQALEVSDWMNRKGIC--VFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY 131
K+ +AL V D M GI +F GR+ A F ++KD +
Sbjct: 253 KKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMR---EAVQLFRDIKDVTPNH 309
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TY +L++ Y R D+AL M E G+ + +TYN I+ + G+ +L E
Sbjct: 310 VTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNE 369
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M + I PDN + IN+Y D+ + +++ + LD TY + H + KA
Sbjct: 370 MSERKIEPDNVTCNTLINAYCKIGDMRS-ALKVKDKMVGAGLKLDQFTYKALIHGFCKAK 428
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD-- 309
IDKA ++L + Y++L+ Y N+ V++L D +R + D
Sbjct: 429 EIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPD---ELVRRGLCVDVS 485
Query: 310 -YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y ++ K+ + + A++VL + G D+ + ++ GY G V IL+++
Sbjct: 486 VYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKVNVTSDILDEM 545
Query: 369 VEKGKATTPNSWAVVAAGY 387
+K T + A Y
Sbjct: 546 YKKRLMITLKIYRSFNASY 564
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 135/322 (41%), Gaps = 18/322 (5%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
LLN + R TD ++KM ++G+ + YN ++ K+G EK VL+EM+ K
Sbjct: 176 VLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELK 235
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
+FPD F+Y I+ Y + + + +++ I D TY S + + + + +
Sbjct: 236 CVFPDLFTYNTLISLY-CKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMRE 294
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL--EKTACKRYINRDYITM 313
A + + ++ + + Y LI Y + + E LRL ++ EK I Y ++
Sbjct: 295 AVQLFRDIKD--VTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVIT--YNSI 350
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
L L + G +A +L E D N +I YC G +++A + + +V G
Sbjct: 351 LRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGL 410
Query: 374 ATTPNSWAVVAAGYFDAGKTERG----FQCMKAALSVYVEGKGWKPDP-------KVITS 422
++ + G+ A + ++ F M A S W D + +
Sbjct: 411 KLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIK 470
Query: 423 ILSKLGDEGSVQDVEAFVAALR 444
+ +L G DV + A +R
Sbjct: 471 LPDELVRRGLCVDVSVYRALIR 492
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 115/243 (47%), Gaps = 9/243 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ Y ++ +ALS +M+ GI+ TYN ++ + + G+ + + ++
Sbjct: 243 TYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDI 302
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K++ P++ +Y I+ Y +DL+ + L+E+ S+ + TY S +
Sbjct: 303 --KDVTPNHVTYTSLIDGYCRVNDLDE-ALRLKEVMSEKGLYPTVITYNSILRKLCEGGR 359
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A+ +L + ER + D + N LI+ Y +G+ L++ D A + Y
Sbjct: 360 LRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKA 419
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL---EDLV 369
++ K E ++A+++L +G S + ++ YC QN EA++ ++LV
Sbjct: 420 LIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQ---QNEEAVIKLPDELV 476
Query: 370 EKG 372
+G
Sbjct: 477 RRG 479
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 108/262 (41%), Gaps = 15/262 (5%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
Y LL+ + +KA +M+ + TYN ++ LY K G + + V
Sbjct: 207 HVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDR 266
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ I PD F+Y I + + + R+++ + + TY S Y + N
Sbjct: 267 MEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIKD---VTPNHVTYTSLIDGYCRVN 323
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD---LEKTACKRYINR 308
+D+A + + E+ I YN ++ G RL D L +R I
Sbjct: 324 DLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGG------RLRDANILLNEMSERKIEP 377
Query: 309 DYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAIL 365
D + T++ A K+G+ A KV + +G D A+I G+C + A+ +L
Sbjct: 378 DNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELL 437
Query: 366 EDLVEKGKATTPNSWAVVAAGY 387
+++ G + + +++ + Y
Sbjct: 438 FGMMDAGFSPSYCTYSWLVDSY 459
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 171/434 (39%), Gaps = 46/434 (10%)
Query: 62 VGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCD--HAVQLDLIGRVHGFLSAES 119
V +I L + R + ++ D M +G F P D + V ++ + RV A+
Sbjct: 278 VDTFNDVIYGLCRLNRIHEGAKLVDRMLFRG---FTPNDITYGVLMNGLCRVGKVDEAQV 334
Query: 120 YFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSH-FRKMKEMGIALSTLTYNDIMCLYSK 178
+ + + T L+N YV+ + D+A + + KM + G T+N ++ K
Sbjct: 335 LLNKVPTPNDVHFT--ILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCK 392
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
G D++ +M A P+ +Y ++ + ++ LE +L EM ++ L+
Sbjct: 393 KGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAK-GFELNIM 451
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
Y K + KA D+L + ++ + D +N LI + K + L L+
Sbjct: 452 GYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDM 511
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
Y T++ A ++ G +EA K++ + G D N +I +C G
Sbjct: 512 LLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGAT 571
Query: 359 QNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
+ A + +++V K + S ++ G GK + ++ + +G PD
Sbjct: 572 EKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIH-----RGLAPDVV 626
Query: 419 VITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKAD 478
S+++ L G+++ EAF L + ++A+
Sbjct: 627 TYNSLINGLCKMGNIR--EAF------------------------------NLFNKLQAE 654
Query: 479 GIDEDEETKEILVC 492
GI D T L+C
Sbjct: 655 GIQPDAITYNTLIC 668
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 115/299 (38%), Gaps = 36/299 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LL+ + ++ Q ++A +M G L+ + YN ++ K G+ K D+L EM
Sbjct: 417 TYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEM 476
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD F++ I E + R+M ++ + TY + H +++
Sbjct: 477 SDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLD-GVIANTVTYNTLIHAFLRGGA 535
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--------LEKTACKR 304
I +A ++ R D I YN LI + LG + L L+D +C
Sbjct: 536 IQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNL 595
Query: 305 YIN---------------RDYI------------TMLEALMKLGEHEEAEKVLKEWELSG 337
IN RD I +++ L K+G EA + + + G
Sbjct: 596 LINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEG 655
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
D N +I +C G+ +A +L VE +W ++ + + E G
Sbjct: 656 IQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENG 714
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 17/201 (8%)
Query: 203 SYRICINSYGARSDLEGMEI-ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK 261
S ICI Y R++L G +L +M+ + +Y + AN A++V
Sbjct: 138 SLFICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFY 197
Query: 262 KAEERLEQKDGI---GYNFLISLYA-----SLGNKSEVLRLWDLEKTACKRYINRDYITM 313
+ + G+ Y F + + A + N +LR D+ K C + Y T+
Sbjct: 198 EMLSK-----GVIPTVYTFGVVMKALCMVNEVDNACSLLR--DMTKHGCVPN-SVVYQTL 249
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
+ AL K EA K+L+E L G D N VI G C + +++ ++ +G
Sbjct: 250 IHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGF 309
Query: 374 ATTPNSWAVVAAGYFDAGKTE 394
++ V+ G GK +
Sbjct: 310 TPNDITYGVLMNGLCRVGKVD 330
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 146/347 (42%), Gaps = 58/347 (16%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LL ++R R +D+A + + +M G L YN ++ +K Q ++ V +M
Sbjct: 236 TYRCLLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDM 295
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
K K+ PD ++Y I I G E + EM ++ P+++ Y + K
Sbjct: 296 KLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLI----AYNTMIQALSK 351
Query: 250 ANLIDKA----SDVLKK-----------------AEERLEQKDGIG-----------YNF 277
+ ++DKA +++K AE +L + D + Y +
Sbjct: 352 SGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKSIYAY 411
Query: 278 LISLYASLGNKSEVLRL----WDLEKTACKRYINRD-YITMLEALMKLGEHEEAEKVLKE 332
L+ + LG+ SE RL W +RD YI+MLE+L + G+ EA ++L +
Sbjct: 412 LVRTLSKLGHSSEAHRLFCNMWSFHDGG-----DRDAYISMLESLCRGGKTVEAIELLSK 466
Query: 333 WELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGK 392
G S DT + N V+ V + + E + + G ++ ++ + GK
Sbjct: 467 VHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGK 526
Query: 393 TERGFQCMKAALSVY--VEGKGWKPDPKVITSILSKLGDEGSVQDVE 437
+K A+ V+ +E KPD S+++ LG G V +
Sbjct: 527 -------VKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAH 566
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 25/274 (9%)
Query: 77 RFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--KDDEKTYQTY 134
R + LEVS+ K I +A + + ++ A F N+ D Y
Sbjct: 392 RLDEVLEVSNKFINKSI-------YAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAY 444
Query: 135 GALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKA 194
++L R +T +A+ K+ E GI+ T+ YN ++ K Q + D+ +MK
Sbjct: 445 ISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQ 504
Query: 195 KNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIKAN 251
FPD F+Y I I+S G ++ + E+ES +P I+ +Y S + K
Sbjct: 505 DGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDII----SYNSLINCLGKNG 560
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR-LWD--LEKTACKRYINR 308
+D+A + +++ D + Y+ LI + +K E+ R L+D + + C +
Sbjct: 561 DVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGK-TDKVEMARSLFDRMITQGCCPNIVT- 618
Query: 309 DYITMLEALMKLGEHEEAEKV---LKEWELSGNS 339
Y +L+ L + G E + L+E L+ +S
Sbjct: 619 -YNILLDCLERAGRTAETVDLYAKLREQGLTPDS 651
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L+ C+ + + + A S F +M G + +TYN ++ + G+ + D+ ++
Sbjct: 583 TYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKL 642
Query: 193 KAKNIFPDNFSYRI 206
+ + + PD+ +Y I
Sbjct: 643 REQGLTPDSITYAI 656
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 163/399 (40%), Gaps = 55/399 (13%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY L++C R + + AL+ F ++ G+ ++ + N ++ + + + ++ D+L
Sbjct: 123 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL 182
Query: 190 TEMKAK-NIFPDNFSYRICINSYGARSDLEGMEIILREME-----SQPHIVL-------- 235
+ PD FSY I + S + + +LR M P++V
Sbjct: 183 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGF 242
Query: 236 -----------------------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG 272
D TY S H KA +DKA L++ + +
Sbjct: 243 FKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNN 302
Query: 273 IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKV 329
YN LI Y+S G E +R++ K + I D +T ++ +L K G+ +EA V
Sbjct: 303 WTYNNLIYGYSSTGQWKEAVRVF---KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
+ G + D N ++ GY G + + + + ++ G A ++ V+ Y +
Sbjct: 360 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 419
Query: 390 AGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTV 446
G ++ A+ ++ E + G KPD ++++ L G + D +E F +
Sbjct: 420 CGMLDK-------AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 472
Query: 447 IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
+ ++ Y+ I+ +G EL+ + +G+ D
Sbjct: 473 VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLD 511
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 149/359 (41%), Gaps = 15/359 (4%)
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+ T+ L+ Y DKA+ F +M++ G+ +TY ++ + G+ + +
Sbjct: 407 FYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFN 466
Query: 191 EMKAKNIFPDNFSYRICINSYGAR-SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+M + + PD ++Y I + S L+ E+I M + H LD ++S + K
Sbjct: 467 QMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH--LDIVFFSSIINNLCK 524
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ A ++ D + Y+ L+ Y +G + LR++D +A
Sbjct: 525 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 584
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T++ K+G +E + +E G T + + +I G G A+ ++
Sbjct: 585 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMT 644
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKL 427
E G A ++ +V G F +C A+ ++ E + +IT +++ +
Sbjct: 645 ESGIAMDICTYNIVLRGLFKN-------RCFDEAIFLFKELRAMNVKINIITLNTMIDGM 697
Query: 428 GDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
V++ + A++ R+ + N Y I I+ G + +++ SM+ G + +
Sbjct: 698 FQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 756
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 126/308 (40%), Gaps = 12/308 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +++ + ++ +KA F++M + GI +TYN ++ K +K L +M
Sbjct: 234 AYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQM 293
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P+N++Y I Y + + + +EM I+ D T + K
Sbjct: 294 VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH-SILPDVVTLSMLMGSLCKYGK 352
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
I +A DV + + D YN +++ YA+ G ++ L+DL I D+ T
Sbjct: 353 IKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDL---MLGDGIAPDFYT 409
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+++A G ++A + E G D VI C G + +A ++
Sbjct: 410 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 469
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
++G A ++ + G+ G + + + ++ G D +SI++ L
Sbjct: 470 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN-----NGMHLDIVFFSSIINNLCK 524
Query: 430 EGSVQDVE 437
G V D +
Sbjct: 525 LGRVMDAQ 532
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 8/222 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y ++N R + D+A+ F +MKE+G + ++ TYN ++ Y++ G+YEK + M
Sbjct: 173 SYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGM 232
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD ++Y I+ G E + EM+ + D TY + Y K +
Sbjct: 233 EDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRK-GCTPDRVTYNTMLDAYSKWSR 291
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+A D+LK + D YN L+ G+ SE ++++ K A +
Sbjct: 292 RGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSA 351
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
++ +LG EEAE+ E +G +PNA YC
Sbjct: 352 LINMYGRLGYFEEAERAWVEMRATGC-----VPNAT--AYCG 386
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 146/351 (41%), Gaps = 20/351 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY--FSNLK 125
II L + + A E+ + M++ G+ AP HA L G L E++ F +K
Sbjct: 36 IISILGREGKLGLAREIFEGMSKAGV---APSVHAYTALLSGYAKQGLLKEAWALFEAMK 92
Query: 126 DD--EKTYQTYGALLN-CYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY 182
+ TY L+N C R + + F +MK+ G+ + +TYN ++ +
Sbjct: 93 EKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLF 152
Query: 183 EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYAS 242
+ +L EMKA N P+ SY INS G L+ + EM+ W TY S
Sbjct: 153 DTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSW-TYNS 211
Query: 243 AAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTA 301
Y + +KA + E+ D YN +I + G +E ++ ++++
Sbjct: 212 LLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKG 271
Query: 302 CKRYINR-DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
C +R Y TML+A K A +LK + +G + D N ++ G
Sbjct: 272 CTP--DRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASE 329
Query: 361 AEAILEDLVEKGKATTPNSWAVVA-----AGYFDAGKTERGFQCMKAALSV 406
A I +L G + S++ + GYF+ + ER + M+A V
Sbjct: 330 AMQIFHELKAAGHSPNLVSFSALINMYGRLGYFE--EAERAWVEMRATGCV 378
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 41/79 (51%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY LL+ + +A+ F ++K G + + ++++ ++ +Y + G +E+ EM
Sbjct: 313 TYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEM 372
Query: 193 KAKNIFPDNFSYRICINSY 211
+A P+ +Y +NSY
Sbjct: 373 RATGCVPNATAYCGLMNSY 391
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 124/313 (39%), Gaps = 38/313 (12%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKM-KEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
+ + +++ LLN V+ ++ D F+ K+ GI + T N ++ K +
Sbjct: 202 QPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAI 261
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
VL EM A P+ +Y + Y ++ D+ G + E+ + V D +TY
Sbjct: 262 RVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDR-GWVPDPTTYTILMDG 320
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEK----- 299
Y K A V+ + EE + + + Y +I Y EVL L D LEK
Sbjct: 321 YCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPS 380
Query: 300 -TACKRYI---------------------------NRDYITMLEALMKLGEHEEAEKVLK 331
C R I N T++ L K G+ EA K+
Sbjct: 381 SALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFD 440
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
E+E G+ T NA+I G C G + A + +++VEKG ++ ++ G+ G
Sbjct: 441 EFE-KGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVG 499
Query: 392 KTERGFQCMKAAL 404
G + M+ L
Sbjct: 500 NAREGIRVMEEML 512
>gi|255661136|gb|ACU25737.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 426
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 184/437 (42%), Gaps = 79/437 (18%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRV-GEL---QRIIRDLRKRKRFSQALE 83
++ T ++I+ G G + L +W++ + RV G+L +I RK +S+A+
Sbjct: 8 DRYTYSTLITHFGKEGL-FDAAL-SWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 84 VSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT--YGALLN 139
+ + R G F P + +++ G+ F A S S ++ T T Y LL
Sbjct: 66 IFSRLKRSG---FTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 140 CYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP 199
YV ++ +ALS F +M+E+ L T N ++ +Y + G ++ + M+ I P
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 200 DNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
+ SY + YG ++L G I L + + +I + TY S Y K +KA+++
Sbjct: 183 NVVSYNTLLRVYG-DAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
+++ + R + + I Y+ +IS+++ K
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWS-----------------------------------K 266
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
+G+ + A + ++ SG D + +I+ Y GLV +A+ +L +L K P
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYEKAGLVAHAKRLLHEL--KRPDNIPRD 324
Query: 380 WAV---VAAG-----------YFDAGKTE--RGFQCMKAALSVY------VE------GK 411
A+ V AG DAG+ + F+ M S Y VE G
Sbjct: 325 IAIHILVGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMCGL 384
Query: 412 GWKPDPKVITSILSKLG 428
G+ PD VI IL+ G
Sbjct: 385 GYFPDSNVIALILNAYG 401
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 156/384 (40%), Gaps = 44/384 (11%)
Query: 147 TDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRI 206
D A+ FR+M TY +M K + ++ +L EM+ + FP ++ +
Sbjct: 197 VDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNV 256
Query: 207 CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
IN + D + ++ M + V + TY + H +DKA +L +
Sbjct: 257 LINGLCKKGDFTRVTKLVDNMFLK-GCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSS 315
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI--TMLEALMKLGEHE 324
+ + Y +I+ G + R+ L + + YI +Y+ ++ L K G+ E
Sbjct: 316 KCVPNEVTYGTIINGLVKQGRALDGARVLVLMEE--RGYIVNEYVYSVLVSGLFKEGKSE 373
Query: 325 EAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
EA ++ KE G +T + +A++ G C + A IL ++ +KG A +++ +
Sbjct: 374 EAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLM 433
Query: 385 AGYFDAGKTERGFQCMK-----------AALSVYVEG-------------------KGWK 414
G+F+ G + + + K SV + G G +
Sbjct: 434 KGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCR 493
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQ-------MYHAFIKANIRNGKG 467
PD +S++ L D GSV++ + + P ++ +++A K + +
Sbjct: 494 PDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQS-SISRA 552
Query: 468 VDELLDSMKADGIDEDEETKEILV 491
VD LL+SM G D D T I +
Sbjct: 553 VD-LLNSMLDRGCDPDLVTCNIFL 575
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y AL++ R R+ D+A+ +M + G A + T++ +M + + G K +V +M
Sbjct: 394 YSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMT 453
Query: 194 AKNIFPDNFSYRICINSYGARSD---LEGMEIILREMES--QPHIVLDWSTYASAAHFYI 248
N + Y + I +G D +E M + + + + +P +V Y+S
Sbjct: 454 KINCAENEVCYSVLI--HGLCKDGKVMEAMMVWAKMLATGCRPDVV----AYSSMIQGLC 507
Query: 249 KANLIDKASDVLKKAEERL-----EQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
A +++A LK E L Q D I YN L+ +L +S + R DL +
Sbjct: 508 DAGSVEEA---LKLYNEMLCLEPDSQPDVITYNI---LFNALCKQSSISRAVDLLNSMLD 561
Query: 304 RYINRDYIT 312
R + D +T
Sbjct: 562 RGCDPDLVT 570
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 150/351 (42%), Gaps = 16/351 (4%)
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
Q +ALS +M E G Y I+ K G +E D+L+ M + + P+ Y
Sbjct: 266 QVHEALS---QMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYN 322
Query: 206 ICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
+ + E E +L EM Q LD T+ F+ + L+D+ ++L++ E
Sbjct: 323 TVLKGLCSAERWEEAEDLLAEM-FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 381
Query: 266 RLEQKDGIGYNFLISLYASLGNKSE-VLRLWDLEKTACKRYINRDYITMLEALMKLGEHE 324
D I Y +I+ + G E V+ L ++ CK Y +L+ L +
Sbjct: 382 HGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPN-TISYTIVLKGLCRAERWV 440
Query: 325 EAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVA 384
+A++++ G + N +I C GLV+ A +L+ ++ G + S++ V
Sbjct: 441 DAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 500
Query: 385 AGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQD-VEAFVAAL 443
G AGKTE + + ++ KG P+ + +S+ S L EG ++ F +
Sbjct: 501 DGLGKAGKTEEALELLNVMIN-----KGITPNTIIYSSMASALSREGRTDKIIQMFDSIQ 555
Query: 444 RTVIPMNRQMYHAFIKANIR---NGKGVDELLDSMKADGIDEDEETKEILV 491
+ + +Y+A I + + + +D M ++G +E T IL+
Sbjct: 556 DATVRSDAALYNAVISSLCKRWETDRAID-FFAYMVSNGCMPNESTYTILI 605
>gi|242039357|ref|XP_002467073.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
gi|241920927|gb|EER94071.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
Length = 808
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 150/357 (42%), Gaps = 12/357 (3%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TY +++ + +A + F+ + E G+ L +T N ++ + G ++P ++
Sbjct: 287 HTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEM 346
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M+ + PD +Y I I + D+E I +++ Q + L+ TY+ + K
Sbjct: 347 MRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQ-GMELNIVTYSVLINALFKKG 405
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK-RYINRDY 310
L + ++L + + D I Y+ LI Y+ LG L++W+L ++ + + ++
Sbjct: 406 LFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQVWNLMCSSQRVTPTSVNH 465
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+++L L K G +EA L+ D + N VI GY G + NA + + ++
Sbjct: 466 VSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIM 525
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDE 430
G T + + GY G M + ++ P T+++ L +
Sbjct: 526 AGMCPTIVTCNSLLYGYCKFGDLH-----MAESYFTAIQLSDLLPTTVTYTTLMDALSEA 580
Query: 431 GSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDED 483
G V + + + + + P N Y IK + D +LD M +G D D
Sbjct: 581 GKVHSMLSLFKEMTGKGIKP-NAVTYSVVIKGLCKQFMFHDAKNVLDDMCIEGFDAD 636
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 62/328 (18%), Positives = 129/328 (39%), Gaps = 47/328 (14%)
Query: 121 FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
+S K+ + + AL N Y R + AL KM + + +S TY+ + LYS
Sbjct: 138 WSGFKEWDSNSIVWDALANSYARAQMNHDALYVLSKMSSLNMQISITTYDSL--LYSLR- 194
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
+ + ++ EM++ I P ++S+ I I+ + + L+E+ + +
Sbjct: 195 KADVALEIFKEMESCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKEGKFI------ 248
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT 300
G+ +N L+S + G + ++ L
Sbjct: 249 -----------------------------PLGMTFNTLMSALCNWGFIQDAKSVFCLMLK 279
Query: 301 ACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
Y T++ L K+G EA + + G D N++I G+ +G +
Sbjct: 280 YGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNSLINGFRLHGHTRE 339
Query: 361 AEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPK 418
++E + +G P+ ++ ++ AG+ + G E G + K L G+G + +
Sbjct: 340 IPKMIEMM--RGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDIL-----GQGMELNIV 392
Query: 419 VITSILSKLGDEGSVQDVEAFVAALRTV 446
+ +++ L +G +VE + + +V
Sbjct: 393 TYSVLINALFKKGLFYEVENLLGEICSV 420
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 133/291 (45%), Gaps = 21/291 (7%)
Query: 157 MKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSD 216
MKE GI L+ TYN ++ K+G + +V M + P +Y + + ++G R D
Sbjct: 230 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRD 289
Query: 217 LEGMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGI 273
+E + +LREME+ +P++ +Y +A D+A +L + E + D I
Sbjct: 290 VETVLWLLREMEAHGVKPNVY----SYTICIRVLGQARRFDEAYRILAEMENEGCKPDVI 345
Query: 274 GYNFLISLYASLGNKSEVLRL-WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKE 332
+ LI + G S+ + W ++K+ K D +T + L K ++ E++ V++
Sbjct: 346 THTVLIQVLCDAGRISDAKDVFWKMKKSDQK----PDRVTYITLLDKFADNGESQSVMEI 401
Query: 333 WE-LSGNSYDTRIP--NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
W + + Y+ + AVI C G V A + +++ +KG S+ + +G+
Sbjct: 402 WNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLK 461
Query: 390 AGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG-SVQDVEAF 439
A + + K Y++ G KP+ ++ G G S++ ++ +
Sbjct: 462 ADRFGDALELFK-----YMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY 507
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 119/286 (41%), Gaps = 10/286 (3%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTY 131
+R R EV D M R+ I A +G G SA +K+
Sbjct: 179 MRDHGRVGDMAEVFDVMQRQ-IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVL 237
Query: 132 Q--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
TY L+ V+ +AL ++ M G+ S TY+ +M + K E V +L
Sbjct: 238 NAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLL 297
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHF 246
EM+A + P+ +SY ICI G + IL EME++ P ++ T+
Sbjct: 298 REMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVI----THTVLIQV 353
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYI 306
A I A DV K ++ ++ D + Y L+ +A G V+ +W+ K
Sbjct: 354 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDN 413
Query: 307 NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
Y +++AL ++G EA ++ E + G + N++I G+
Sbjct: 414 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGF 459
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 172/446 (38%), Gaps = 40/446 (8%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY------- 120
+I L + R +ALE+ D M +KGI Q + GFL A+ +
Sbjct: 420 VIDALCQVGRVFEALEMFDEMKQKGIV-------PEQYSYNSLISGFLKADRFGDALELF 472
Query: 121 -FSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
+ ++ + T+ +N Y + ++ KA+ + MK GI + N ++ +K+
Sbjct: 473 KYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 532
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWST 239
G+ V E+KA + PD +Y + I S + I +M + + V D
Sbjct: 533 GRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDM-IENNCVPDVLV 591
Query: 240 YASAAHFYIKANLIDKASDVLKKAEE-RLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
S KA D+A + + +E LE DG YN L++ G EV+ L LE
Sbjct: 592 VNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGT-YNTLLAGLGREGKVKEVMHL--LE 648
Query: 299 KTACKRYINR--DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNG 356
+ Y Y T+L+ L K G +A +L G D N VI G
Sbjct: 649 EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEE 708
Query: 357 LVQNAEAILEDLVEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
A +I + K P+ + + + G + +K Y G K
Sbjct: 709 RYNEAFSI---FCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKE----YFLQPGSK 761
Query: 415 PD----PKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD- 469
D ++ IL K G E S++ E + + I ++ IK + K ++
Sbjct: 762 TDRSSCHSLMEGILKKAGTEKSIEFAEIIAS---SGITLDDFFLCPLIKHLCKQKKALEA 818
Query: 470 -ELLDSMKADGIDEDEETKEILVCTM 494
EL+ K+ G+ + L+C +
Sbjct: 819 HELVKKFKSFGVSLKTGSYNSLICGL 844
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 135/335 (40%), Gaps = 44/335 (13%)
Query: 137 LLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKN 196
L+ +Q++ +A +K K G++L T +YN ++C + + EMK
Sbjct: 805 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELG 864
Query: 197 IFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKA 256
PD F+Y + +++ G +E M + EM + Y S Y+ N I
Sbjct: 865 CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRK--------GYEST---YVTYNTI--I 911
Query: 257 SDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEA 316
S ++K RLEQ + YN + ++ T C Y +L+
Sbjct: 912 SGLVK--SRRLEQAIDLYYNLMSQGFSP---------------TPCT------YGPLLDG 948
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
L+K G E+AE + E G + I N ++ G+ G + + +D+V++G
Sbjct: 949 LLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 1008
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV 436
S+ ++ AG+ G + L + G +PD ++ LG +++
Sbjct: 1009 IKSYTIIIDTLCKAGQLNDGLTYFRQLLEM-----GLEPDLITYNLLIDGLGKSKRLEEA 1063
Query: 437 EAFVAAL--RTVIPMNRQMYHAFIKANIRNGKGVD 469
+ + + ++P N Y++ I + GK +
Sbjct: 1064 VSLFNEMQKKGIVP-NLYTYNSLILHLGKAGKAAE 1097
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 169/439 (38%), Gaps = 59/439 (13%)
Query: 56 NGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFL 115
+G K V IR L + +RF +A + M +G C H V + ++
Sbjct: 303 HGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEG-CKPDVITHTVLIQVLCDAGRIS 361
Query: 116 SAESYFSNLK--DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
A+ F +K D + TY LL+ + ++ + + MK G + + Y ++
Sbjct: 362 DAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVI 421
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
+ G+ + ++ EMK K I P+ +SY I+
Sbjct: 422 DALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG----------------------- 458
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
++KA+ A ++ K + + +G + I+ Y G + ++
Sbjct: 459 -------------FLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 505
Query: 294 LWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII 350
++L K+ + I D + +L L K G A++V E + G S DT I ++I
Sbjct: 506 RYELMKS---KGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDT-ITYTMMI 561
Query: 351 GYCNNGL-VQNAEAILEDLVEKGKATTPNSWAV--VAAGYFDAGKTERGFQCMKAALSVY 407
C+ A I D++E P+ V + + AG+ + +Q +
Sbjct: 562 KCCSKASKFDEAVKIFYDMIENN--CVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMN 619
Query: 408 VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNGK 466
+E P ++L+ LG EG V++V + + + P N Y+ + +NG
Sbjct: 620 LE-----PTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGA 674
Query: 467 GVD--ELLDSMKADGIDED 483
D ++L SM G D
Sbjct: 675 VNDALDMLYSMTTKGCIPD 693
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 5/256 (1%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K E TY TY +++ V+ R+ ++A+ + + G + + TY ++ K G+ E
Sbjct: 898 KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIED 957
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
++ EM + Y I +N + + E + + ++M Q I D +Y
Sbjct: 958 AENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ-GINPDIKSYTIII 1016
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACK 303
KA ++ ++ E + D I YN LI E + L+ +++K
Sbjct: 1017 DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 1076
Query: 304 RYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
+ Y +++ L K G+ EA K+ +E G + NA+I GY +G +A A
Sbjct: 1077 PNL-YTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYA 1135
Query: 364 ILEDLVEKGKATTPNS 379
++ G PNS
Sbjct: 1136 AYGRMIVGG--CLPNS 1149
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 127/318 (39%), Gaps = 14/318 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y +L+ V + D A F +MKE+G TYN ++ K+ + E++ V EM
Sbjct: 836 SYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM 895
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K +Y I+ LE + + SQ TY +KA
Sbjct: 896 HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQ-GFSPTPCTYGPLLDGLLKAGR 954
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
I+ A ++ + E + + YN L++ + GN +V L+ + + IN D
Sbjct: 955 IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLF---QDMVDQGINPDIKS 1011
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ L K G+ + ++ G D N +I G + ++ A ++ ++
Sbjct: 1012 YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 1071
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+KG ++ + AGK + + L+ KGWKP+ +++
Sbjct: 1072 KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLT-----KGWKPNVFTYNALIRGYSV 1126
Query: 430 EGSVQDVEAFVAALRTVI 447
GS A+ A R ++
Sbjct: 1127 SGSTD--SAYAAYGRMIV 1142
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 25/328 (7%)
Query: 149 KALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICI 208
+A R+M EMG TYN ++ K G+ E+ ++L + K + + P+ FSY +
Sbjct: 328 EAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLM 387
Query: 209 NSYGARSDL---EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
++Y + D GM + E+ + +V +Y + H + A ID A V +K E
Sbjct: 388 HAYCKKGDYVKASGMLFRIAEIGEKSDLV----SYGAFIHGVVVAGEIDVALMVREKMME 443
Query: 266 RLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGE 322
+ D YN L+S L K + + L R + D + T+++ ++ GE
Sbjct: 444 KGVFPDAQIYNILMS---GLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGE 500
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
+EA K+ K G NA+I G+C G + +A + L ++ A +++
Sbjct: 501 LDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYST 560
Query: 383 VAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVI--TSILSKLGDEGSVQDVEAFV 440
V GY M +AL ++ + K P VI TS+++ + + E
Sbjct: 561 VIDGYVKQHD-------MSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVF 613
Query: 441 AALRT--VIPMNRQMYHAFIKANIRNGK 466
+ +++ ++P N Y + + GK
Sbjct: 614 SGMKSFDLVP-NVVTYTTLVGGFFKAGK 640
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 150/367 (40%), Gaps = 56/367 (15%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y +++ Y ++ A ++K G+ + TY ++ + K G++E V +LTEM
Sbjct: 243 YNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMA 302
Query: 194 AKNIFPDNFSYRICIN------SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
A+ + N + ++ N YG ++ M + EM P D +TY +F
Sbjct: 303 ARGL---NMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGP----DITTYNIMINFS 355
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
K I++A ++L+KA+ER + Y L+ Y CK+
Sbjct: 356 CKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAY-------------------CKK--- 393
Query: 308 RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
DY+ L ++ E E ++ SY I V+ G + L+ + E
Sbjct: 394 GDYVKASGMLFRIAEIGEKSDLV--------SYGAFIHGVVVAGEIDVALM-----VREK 440
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
++EKG + ++ +G G+ MK LS ++ + +PD V +++
Sbjct: 441 MMEKGVFPDAQIYNILMSGLCKKGR----IPAMKLLLSEMLD-RNVQPDVYVFATLIDGF 495
Query: 428 GDEGSVQD-VEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDEL--LDSMKADGIDEDE 484
G + + ++ F +R + Y+A IK + GK D L L+ M + DE
Sbjct: 496 IRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDE 555
Query: 485 ETKEILV 491
T ++
Sbjct: 556 YTYSTVI 562
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 11/269 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y L++ Y ++ KA ++ E+G ++Y + G+ + V +M
Sbjct: 382 SYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKM 441
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
K +FPD Y I ++ + + M+++L EM QP D +A+ +I+
Sbjct: 442 MEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQP----DVYVFATLIDGFIR 497
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+D+A + K + +GYN +I + G ++ L + +
Sbjct: 498 NGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYT 557
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T+++ +K + A K+ + + ++I G+C + AE + +
Sbjct: 558 YSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGM- 616
Query: 370 EKGKATTPN--SWAVVAAGYFDAGKTERG 396
K PN ++ + G+F AGK ER
Sbjct: 617 -KSFDLVPNVVTYTTLVGGFFKAGKPERA 644
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 91/452 (20%), Positives = 171/452 (37%), Gaps = 62/452 (13%)
Query: 81 ALEVSDWMN-RKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD--EKTYQTYGAL 137
L+ DW + R C H+ L L+ F E N+K + T + + AL
Sbjct: 77 GLKFFDWASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSAL 136
Query: 138 LNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC--------------LYSKT---- 179
+ Y D+AL F ++EM T ++++ LY K
Sbjct: 137 ILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTD 196
Query: 180 ----------------------GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDL 217
G+ E+ ++ K P Y + I+ Y + DL
Sbjct: 197 DGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDL 256
Query: 218 EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNF 277
+ L E++ + ++ TY + + + KA + +L + R + +N
Sbjct: 257 QCATRALNELKMKG-VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNN 315
Query: 278 LISL---YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
+I Y + +E+LR + + C I Y M+ K G EEA+++L++ +
Sbjct: 316 VIDAEYKYGLVTEAAEMLR--RMAEMGCGPDITT-YNIMINFSCKGGRIEEADELLEKAK 372
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G + ++ YC G A +L + E G+ + S+ G AG+ +
Sbjct: 373 ERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEID 432
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQ 452
+ + KG PD ++ ++S L +G + ++ ++ + R V P +
Sbjct: 433 VALMVREKMME-----KGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQP-DVY 486
Query: 453 MYHAFIKANIRNGKGVDELLDSMKA---DGID 481
++ I IRNG+ +DE + K G+D
Sbjct: 487 VFATLIDGFIRNGE-LDEAIKIFKVIIRKGVD 517
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 136/343 (39%), Gaps = 23/343 (6%)
Query: 105 LDLIGRVHGFLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGI 162
L I R+ + +A S FS L K + T L+NCY Q A S + +MG
Sbjct: 62 LGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGF 121
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
+ +T+N ++ + G K ++ AK D FSY IN
Sbjct: 122 QPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQ 181
Query: 223 ILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLI 279
+L++ME +P+++ TY++ K LI A + R D + YN LI
Sbjct: 182 LLQKMEEDLVRPNLI----TYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLI 237
Query: 280 SLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELS 336
S+G E RL + + IN D T +++AL K G EA+ V
Sbjct: 238 HGCCSVGQWREATRLLTM---MVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKR 294
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERG 396
G D NA++ G+C + V A + +V++G ++ V+ GY +
Sbjct: 295 GEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEA 354
Query: 397 FQCMKAALSVYVEGKGWKPDPKVITSI---LSKLGDEGSVQDV 436
K + K P+ S+ L KLG VQ++
Sbjct: 355 MVLFKE-----IRCKNLVPNLATYNSLIDGLCKLGRMSCVQEL 392
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 113/243 (46%), Gaps = 11/243 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ + R AL F + GI + + YN ++ GQ+ + +LT M
Sbjct: 197 TYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMM 256
Query: 193 KAKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
NI PD++++ I +++ G + +G+ ++ + +P IV TY + +
Sbjct: 257 VRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIV----TYNALMEGFCL 312
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR- 308
+N + +A ++ + +R + D + YN LI+ Y + E + L+ ++ CK +
Sbjct: 313 SNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLF--KEIRCKNLVPNL 370
Query: 309 -DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y ++++ L KLG ++++ E G S D N + +C + + A ++
Sbjct: 371 ATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQ 430
Query: 368 LVE 370
+V+
Sbjct: 431 IVQ 433
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 175/451 (38%), Gaps = 50/451 (11%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESY---FSNL 124
+I L + KR +A V + R G C + V +D G AE F L
Sbjct: 13 VINGLCREKRLDEAFSVLERAVRAG-CEPDYVTYNVFID------GLCKAERVDDAFQLL 65
Query: 125 KD-DEK----TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
K DEK T TY AL++ ++ + D+A++ +M E G + + TY ++ SK
Sbjct: 66 KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKA 125
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPH---IVLD 236
G+ E+ + +M PD F Y I E + +E ++ H V D
Sbjct: 126 GRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPD 185
Query: 237 WSTYASAAHFYIKANLIDKASDVL-KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
TY S KA I +A V +A ER D + Y +I LG E
Sbjct: 186 VVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE----- 240
Query: 296 DLEKTACKRY---INR-------DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
C+R+ NR Y +++ MK +A +V ++ SG T
Sbjct: 241 -----GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTY 295
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
N ++ G C G V A A + E+G T +++ + G+ G + + L
Sbjct: 296 NIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLD 355
Query: 406 VYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYHAFIKANIR 463
+G +P+ I+ L G + + L R + P + ++AF+ +
Sbjct: 356 -----RGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCP-DVYTFNAFLHGLCQ 409
Query: 464 NGKGVD---ELLDSMKADGIDEDEETKEILV 491
V EL +SM + G + + IL+
Sbjct: 410 RLDTVSDGVELFESMVSQGTSPNLHSYSILM 440
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 72/376 (19%), Positives = 134/376 (35%), Gaps = 49/376 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+ ++N R+++ D+A S + G +TYN + K + + +L +M
Sbjct: 9 AFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM 68
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM------------------------- 227
K P +Y ++ L+ +L +M
Sbjct: 69 DEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRV 128
Query: 228 ESQPHIVLDWSTYASAAHFYIKANLI---------DKASDVLKKAEERLEQ----KDGIG 274
E I +D ++ LI ++A + K+A R D +
Sbjct: 129 EEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVT 188
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLK 331
Y LI G E +++D E A +R D Y ++++ L KLG EE +
Sbjct: 189 YTSLIDGLCKAGRILEARQVFDDE--AVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFH 246
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
E G D A+I G+ ++ A + +++ G + ++ ++ G AG
Sbjct: 247 EMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAG 306
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQ-DVEAFVAALRTVIPMN 450
+ + A + +E +G ++++ EG+V VE F L N
Sbjct: 307 RVAEAY-----ATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 361
Query: 451 RQMYHAFIKANIRNGK 466
Y+ I+ R GK
Sbjct: 362 LVSYNIIIRGLCRAGK 377
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 163/399 (40%), Gaps = 55/399 (13%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY L++C R + + AL+ F ++ G+ ++ + N ++ + + + ++ D+L
Sbjct: 110 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL 169
Query: 190 TEMKAK-NIFPDNFSYRICINSYGARSDLEGMEIILREME-----SQPHIVL-------- 235
+ PD FSY I + S + + +LR M P++V
Sbjct: 170 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGF 229
Query: 236 -----------------------DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDG 272
D TY S H KA +DKA L++ + +
Sbjct: 230 FKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNN 289
Query: 273 IGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKV 329
YN LI Y+S G E +R++ K + I D +T ++ +L K G+ +EA V
Sbjct: 290 WTYNNLIYGYSSTGQWKEAVRVF---KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
+ G + D N ++ GY G + + + + ++ G A ++ V+ Y +
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 406
Query: 390 AGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRTV 446
G ++ A+ ++ E + G KPD ++++ L G + D +E F +
Sbjct: 407 CGMLDK-------AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 459
Query: 447 IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
+ ++ Y+ I+ +G EL+ + +G+ D
Sbjct: 460 VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLD 498
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 119/292 (40%), Gaps = 10/292 (3%)
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+ T+ L+ Y DKA+ F +M++ G+ +TY ++ + G+ + +
Sbjct: 394 FYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFN 453
Query: 191 EMKAKNIFPDNFSYRICINSYGAR-SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+M + + PD ++Y I + S L+ E+I M + H LD ++S + K
Sbjct: 454 QMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH--LDIVFFSSIINNLCK 511
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ A ++ D + Y+ L+ Y +G + LR++D +A
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 571
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T++ K+G +E + +E G T + + +I G G A+ ++
Sbjct: 572 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMT 631
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
E G A ++ +V G F +C A+ ++ E + +IT
Sbjct: 632 ESGIAMDICTYNIVLRGLFKN-------RCFDEAIFLFKELRAMNVKINIIT 676
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 126/308 (40%), Gaps = 12/308 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +++ + ++ +KA F++M + GI +TYN ++ K +K L +M
Sbjct: 221 AYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQM 280
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P+N++Y I Y + + + +EM I+ D T + K
Sbjct: 281 VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH-SILPDVVTLSMLMGSLCKYGK 339
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
I +A DV + + D YN +++ YA+ G ++ L+DL I D+ T
Sbjct: 340 IKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDL---MLGDGIAPDFYT 396
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+++A G ++A + E G D VI C G + +A ++
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
++G A ++ + G+ G + + + ++ G D +SI++ L
Sbjct: 457 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN-----NGMHLDIVFFSSIINNLCK 511
Query: 430 EGSVQDVE 437
G V D +
Sbjct: 512 LGRVMDAQ 519
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 155/402 (38%), Gaps = 48/402 (11%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK---DDE 128
L+++K +ALE+ + + R+ + + + +G F++ E+ + + D+
Sbjct: 14 LKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNS 73
Query: 129 KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
Y + Y R+ + +A+ F +M S L+YN IM + ++G +++ V
Sbjct: 74 LLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKV 133
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP----------------- 231
MK I PD +++ I I S+ +L M SQ
Sbjct: 134 FLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYE 193
Query: 232 -----------------HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
I D ST+ H K + ++ +L K ++ +
Sbjct: 194 ENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFT 253
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLK 331
+N I G S + + D + + + D Y T++ L K EAEK L
Sbjct: 254 FNIFIQGLCRKGMLSGAMSMLD---SVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLH 310
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
+ G D N +I GYC G++QNAE IL+ + KG ++ + G
Sbjct: 311 KLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQND 370
Query: 392 KTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSV 433
+ +R AAL GKG KP + ++ L EG +
Sbjct: 371 EIDRALALFNAAL-----GKGLKPTVILYNMLIKGLCQEGLI 407
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 129/342 (37%), Gaps = 43/342 (12%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ + R+ A+S + G+ +TYN ++C K + L ++
Sbjct: 253 TFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL 312
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD F+Y I+ Y L+ E IL+ + V D TY S + + +
Sbjct: 313 VNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKG-FVPDEFTYCSLINGLCQNDE 371
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
ID+A + A + + I YN LI K C+ +
Sbjct: 372 IDRALALFNAALGKGLKPTVILYNMLI-------------------KGLCQEGL------ 406
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+L+AL + E E +G S D N VI G C G V +A ++ D + KG
Sbjct: 407 ILQALQMMNEMSE----------NGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKG 456
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
++ + GY K E Q + S G PD S+L+ L
Sbjct: 457 YVPDVFTFNTLIDGYCKQLKMETTIQILNKMWS-----HGVTPDVITYNSVLNGLSKAVK 511
Query: 433 VQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLD 473
+D+ E F + N+ Y+ ++ + GK V+E LD
Sbjct: 512 NEDLMETFETMVEKGCVPNKITYNILTESLCKAGK-VNEALD 552
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 13/241 (5%)
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD----LEKTACKRYINRDYITMLEALM 318
AE R++ + + I S G K +V D ++ C+ + Y ++ L+
Sbjct: 64 AETRMDIDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSV-LSYNAIMNILV 122
Query: 319 KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
+ G ++A KV + G D I +C +A +L ++V +G
Sbjct: 123 ESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAV 182
Query: 379 SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEA 438
++ V AG+++ ++ L + G PD +L L +G VQ+ E
Sbjct: 183 AYCTVVAGFYEENYRVEAYELFNDMLRI-----GIFPDVSTFNKLLHTLCKKGEVQESER 237
Query: 439 FV-AALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDEETKEILVCTME 495
+ L+ + N ++ FI+ R G G +LDS+ +G+ D T L+C +
Sbjct: 238 LLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLC 297
Query: 496 K 496
K
Sbjct: 298 K 298
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++LN + + + + F M E G + +TYN + K G+ + D++ E+
Sbjct: 498 TYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEI 557
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
K I PD S+ I+ + DL+G + R M Q + +TY
Sbjct: 558 LNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATY 605
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 103/278 (37%), Gaps = 43/278 (15%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y L+ ++ +AL +M E G + TYN ++ K G +++ +
Sbjct: 394 YNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAI 453
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
AK PD F++ I+ Y + +E IL +M S + D TY S + KA
Sbjct: 454 AKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHG-VTPDVITYNSVLNGLSKA--- 509
Query: 254 DKASDVLKKAEERLEQ---KDGIGYNFLISLYASLGNKSEVLRLWD--LEK--------- 299
K D+++ E +E+ + I YN L G +E L L D L K
Sbjct: 510 VKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSF 569
Query: 300 -TACKRYINR------------------------DYITMLEALMKLGEHEEAEKVLKEWE 334
T + N Y M+ A + + EK+ E
Sbjct: 570 ATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMG 629
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
G + DT +I G+C G + L +++EKG
Sbjct: 630 AGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKG 667
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 165/399 (41%), Gaps = 33/399 (8%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQL--DL 107
LD K EL R +RD R + S ++ G+C D A + D+
Sbjct: 151 LDGLCKQSMTAEACELMRSLRDGSLRVS-PDTVTFSTLID--GLCKCGQIDEACSVFDDM 207
Query: 108 IGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTL 167
I A Y N+ TY AL+N + + ++A + M + G+ +
Sbjct: 208 I--------AGGYVPNVI-------TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 252
Query: 168 TYNDIMCLYSKTGQYEKVPDVLTEMKAKN-----IFPDNFSYRICINSYGARSDLEGMEI 222
TY+ ++ + K + ++ ++L M ++ + PD ++ I I + E
Sbjct: 253 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASA 312
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+ EM ++ ++ D T+ + KA ++ A D+L + + YN L+
Sbjct: 313 LFEEMVAK-NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGL 371
Query: 283 ASLGNKSEVLR-LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
G E + L ++ + C + Y +++ AL + ++A +++ E + G D
Sbjct: 372 CKSGRIEEACQFLEEMVSSGCVPD-SITYGSLVYALCRASRTDDALQLVSELKSFGWDPD 430
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK 401
T N ++ G +G + A +LE++V KG ++A +G +G + ++
Sbjct: 431 TVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLR 490
Query: 402 AALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
L+ KG PD +SIL + G + DV+A +
Sbjct: 491 VVLA-----KGMLPDATTCSSILDWVCRSGKLDDVKAMI 524
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 155/376 (41%), Gaps = 16/376 (4%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAES--YFSNLK 125
+I L K R +A E+ M RK C P L G ++AE+ +L+
Sbjct: 113 LINGLCKVGRIDEARELIQEMTRKS-CDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR 171
Query: 126 DDEKTYQ----TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
D T+ L++ + Q D+A S F M G + +TYN ++ K +
Sbjct: 172 DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADK 231
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVL-DW 237
E+ ++ M K + PD +Y + ++++ S ++ +L M S+ P++++ D
Sbjct: 232 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDK 291
Query: 238 STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 297
T+ KA ++AS + ++ + Q D + + LI G + DL
Sbjct: 292 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL 351
Query: 298 EKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGL 357
Y ++ L K G EEA + L+E SG D+ +++ C
Sbjct: 352 MGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASR 411
Query: 358 VQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDP 417
+A ++ +L G ++ ++ G + +GKTE+ ++ + GKG +PD
Sbjct: 412 TDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV-----GKGHQPDS 466
Query: 418 KVITSILSKLGDEGSV 433
+ S L G++
Sbjct: 467 FTFAACFSGLHRSGNL 482
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 165/411 (40%), Gaps = 64/411 (15%)
Query: 134 YGALLNCYVRQRQTDKALSHFR-KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +L R T +AL FR +M G+A + +TYN I+ K+ ++ E+
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
+ PD +Y I+S DLE + +M S+ P++V TY+ + K
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVV----TYSVLINGLCK 119
Query: 250 ANLIDKASDVLKKAEERLEQ--KDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
ID+A +++++ + + I YN + +E L + R ++
Sbjct: 120 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR-VS 178
Query: 308 RDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
D +T +++ L K G+ +EA V + G + NA++ G C ++ A A+
Sbjct: 179 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAM 238
Query: 365 LEDLVEKG---------------------------------KATTPN-------SWAVVA 384
+E +V+KG + TPN ++ ++
Sbjct: 239 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILI 298
Query: 385 AGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALR 444
AG AG E+ +AL + K +PD +++ L G V+ + +
Sbjct: 299 AGACKAGNFEQA-----SALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 353
Query: 445 TV-IPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDEDEETKEILV 491
+ +P N Y+A + ++G+ ++E L+ M + G D T LV
Sbjct: 354 NLGVPPNVVTYNALVHGLCKSGR-IEEACQFLEEMVSSGCVPDSITYGSLV 403
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG+L+ R +TD AL ++K G T+TYN ++ K+G+ E+ VL EM
Sbjct: 398 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEM 457
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K PD+F++ C + +L G +LR + ++ ++ D +T +S + ++
Sbjct: 458 VGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAK-GMLPDATTCSSILDWVCRSGK 516
Query: 253 IDKASDVLKKAE 264
+D ++K+ E
Sbjct: 517 LDDVKAMIKEFE 528
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 124/307 (40%), Gaps = 29/307 (9%)
Query: 45 RIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGIC--VFAPCDHA 102
R +++ V G V ++ K R +ALE+ M +G V P
Sbjct: 234 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVT 293
Query: 103 VQLDLIG--RVHGFLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMK 158
+ + G + F A + F + K+ + T+GAL++ + Q + A M
Sbjct: 294 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 353
Query: 159 EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLE 218
+G+ + +TYN ++ K+G+ E+ L EM + PD+ +Y + + S +
Sbjct: 354 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 413
Query: 219 GMEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
++ E++S P D TY K+ ++A VL++ + Q D +
Sbjct: 414 DALQLVSELKSFGWDP----DTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 469
Query: 276 NFLISLYASLGNKSEVLRLWDL--------EKTACKRYINRDYITMLEALMKLGEHEEAE 327
S GN + + L + + T C ++L+ + + G+ ++ +
Sbjct: 470 AACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCS--------SILDWVCRSGKLDDVK 521
Query: 328 KVLKEWE 334
++KE+E
Sbjct: 522 AMIKEFE 528
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 102/488 (20%), Positives = 185/488 (37%), Gaps = 120/488 (24%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAP----CDHAVQLDLIGRVHGFLSAESYFSN 123
++R + + +A+E M KG F P C+H L L+ R++ +A ++++
Sbjct: 161 LVRCCCQLRMVDEAIECFYLMKEKG---FYPKTETCNHI--LTLLSRLNRIENAWVFYAD 215
Query: 124 LKDDE--KTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
+ E T+ ++N ++ + KA M+ GI + +TYN ++ +S G+
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 182 YE--------------------------------KVPDVLTEMKAKNIFPDNFSYRICIN 209
E + +VL EMK + PD+ SY I I
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIR 335
Query: 210 SYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQ 269
DLE M R+ + +V + TY + H N I+ A ++++ E+
Sbjct: 336 GCSNNGDLE-MAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 394
Query: 270 KDGIGYNFLISLYASLGNKSEVLRLWD----------------LEKTACKRYINRDY--- 310
D + YN LI+ Y G+ + L D L C++ R+
Sbjct: 395 LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADEL 454
Query: 311 ------------ITMLEALM----KLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
+ M+ LM +G + A +LKE ++ + D N ++ G C
Sbjct: 455 FEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCG 514
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWK 414
G + A ++ ++ +G S+ + +GY G T+ F LS+ G+
Sbjct: 515 EGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSL-----GFN 569
Query: 415 PDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKG--VDELL 472
P ++L+ Y+A +K +N +G +ELL
Sbjct: 570 P------TLLT----------------------------YNALLKGLSKNQEGELAEELL 595
Query: 473 DSMKADGI 480
MK++GI
Sbjct: 596 REMKSEGI 603
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 151/366 (41%), Gaps = 18/366 (4%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+T +L R + + A + M M I + T+N ++ + K G+ +K L
Sbjct: 191 ETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGI 250
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYI 248
M+ I P +Y + + R +EG +I+ EM+S QP D TY +
Sbjct: 251 MEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQP----DMQTYNPILSWMC 306
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
+AS+VL++ +E D + YN LI ++ G+ D
Sbjct: 307 NEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFY 363
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y T++ L + E AE +++E G D+ N +I GYC +G + A A+ +++
Sbjct: 364 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM 423
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
+ G T ++ + KT + + V GKG KPD ++ +++
Sbjct: 424 MTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK-----VVGKGMKPDLVMMNTLMDGHC 478
Query: 429 DEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEE 485
G++ + + + + I + Y+ ++ GK + EL+ MK GI D
Sbjct: 479 AIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538
Query: 486 TKEILV 491
+ L+
Sbjct: 539 SYNTLI 544
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 165/400 (41%), Gaps = 57/400 (14%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY L++C R + + AL+ F ++ G+ ++ + N ++ + + + ++ D+L
Sbjct: 113 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL 172
Query: 190 TEMKAK-NIFPDNFSYRICINSY------GARSDL-----EGMEI--------------- 222
+ PD FSY I + S G DL EG +
Sbjct: 173 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGF 232
Query: 223 -----------ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
+ +EM Q I D TY S H KA +DKA L++ + +
Sbjct: 233 FKEGDVNKACDLFKEM-VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 291
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEK 328
YN LI Y+S G E +R++ K + I D +T ++ +L K G+ +EA
Sbjct: 292 NWTYNNLIYGYSSTGQWKEAVRVF---KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 348
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
V + G + D N ++ GY G + + + + ++ G A ++ V+ Y
Sbjct: 349 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 408
Query: 389 DAGKTERGFQCMKAALSVYVEGK--GWKPDPKVITSILSKLGDEGSVQD-VEAFVAALRT 445
+ G ++ A+ ++ E + G KPD ++++ L G + D +E F +
Sbjct: 409 NCGMLDK-------AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 461
Query: 446 VIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
+ ++ Y+ I+ +G EL+ + +G+ D
Sbjct: 462 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLD 501
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 119/292 (40%), Gaps = 10/292 (3%)
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+ T+ L+ Y DKA+ F +M++ G+ +TY ++ + G+ + +
Sbjct: 397 FYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFN 456
Query: 191 EMKAKNIFPDNFSYRICINSYGAR-SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+M + + PD ++Y I + S L+ E+I M + H LD ++S + K
Sbjct: 457 QMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH--LDIVFFSSIINNLCK 514
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ A ++ D + YN L+ Y +G + LR++D +A
Sbjct: 515 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 574
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T++ K+G +E + +E G T + + +I G G A+ ++
Sbjct: 575 YGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMT 634
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
E G A ++ +V G F +C A+ ++ E + +IT
Sbjct: 635 ESGIAMDICTYNIVLRGLFKN-------RCFDEAIFLFKELRAMNVKINIIT 679
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 126/308 (40%), Gaps = 12/308 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +++ + ++ +KA F++M + GI +TYN ++ K +K L +M
Sbjct: 224 AYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQM 283
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P+N++Y I Y + + + +EM I+ D T + K
Sbjct: 284 VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH-SILPDVVTLSMLMGSLCKYGK 342
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
I +A DV + + D YN +++ YA+ G ++ L+DL I D+ T
Sbjct: 343 IKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDL---MLGDGIAPDFYT 399
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+++A G ++A + E G D VI C G + +A ++
Sbjct: 400 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 459
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
++G A ++ + G+ G + + + ++ G D +SI++ L
Sbjct: 460 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN-----NGMHLDIVFFSSIINNLCK 514
Query: 430 EGSVQDVE 437
G V D +
Sbjct: 515 LGRVMDAQ 522
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 152/397 (38%), Gaps = 44/397 (11%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+NC+ + +KA S+F +MK +G+ + +T + + + K G + + +M
Sbjct: 271 TYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQM 330
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + + P+ F+Y ++ L+ ++L EM Q +V + TY K
Sbjct: 331 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG-LVPNVVTYTVMVDGLCKEGK 389
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL------------------ 294
+ A DVL E + + + Y LI + N L L
Sbjct: 390 VAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGT 449
Query: 295 --WDLEKTA----CKRYINR-----------DYITMLEALMKLGEHEEAEKVLKEWELSG 337
W L K K +++ Y T+++A K G+ EA +L + SG
Sbjct: 450 LIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSG 509
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+ A+I G C G + A + + + E G + + G+ G +
Sbjct: 510 LQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAV 569
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHA 456
M + KG D V TS++ +G +Q A A + T + ++ Y
Sbjct: 570 HLMNEMVD-----KGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTC 624
Query: 457 FIKA--NIRNGKGVDELLDSMKADGIDEDEETKEILV 491
FI N+ + +L M GI D+ L+
Sbjct: 625 FISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLI 661
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 150/370 (40%), Gaps = 25/370 (6%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ +++ +Q + +A + F +MK MG + +TYN ++ Y K G+ E+V +++EM
Sbjct: 201 TFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEM 260
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI--VLDWSTYASAAHFYIKA 250
+ D +Y IN + +E EM+ + V+ ST+ A + K
Sbjct: 261 RKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDA---FCKE 317
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINR 308
L+ +A + + R + Y L+ G + + L D + + +
Sbjct: 318 GLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT- 376
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y M++ L K G+ A+ VL E +G + + +I G+ N + A +L ++
Sbjct: 377 -YTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEM 435
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
KG + + + G K + +L ++ G +P+ + T+I+
Sbjct: 436 KNKGMELDVSLYGTLIWGLCKVQKLDEA-----KSLLHKMDDCGLRPNTVIYTTIMDAFF 490
Query: 429 DEGSVQDVEAFVAALRTVIP-----MNRQMYHAFIKANIRNGKGVDEL--LDSMKADGID 481
G E+ AL IP N Y A I + G + + D M+ G+D
Sbjct: 491 KAGK----ESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLD 546
Query: 482 EDEETKEILV 491
+ + L+
Sbjct: 547 PNVQVYTTLI 556
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 98/243 (40%), Gaps = 1/243 (0%)
Query: 155 RKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGAR 214
R++ E A + T+N ++ K G+ + + MKA PD +Y I+ YG
Sbjct: 188 RRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKC 247
Query: 215 SDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG 274
+LE +E+++ EM + D TY + + + K I+KA + + + +
Sbjct: 248 GELEEVELLVSEMR-KSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVT 306
Query: 275 YNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWE 334
+ + + G E ++L+ + Y ++++ K G ++A +L E
Sbjct: 307 LSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV 366
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G + ++ G C G V A+ +L + G + + G+F +E
Sbjct: 367 HQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSE 426
Query: 395 RGF 397
R
Sbjct: 427 RAL 429
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 132/340 (38%), Gaps = 53/340 (15%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIG 109
LD V G V ++ L K + + A +V M R G+ A +L
Sbjct: 362 LDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGV-------KANELLYTT 414
Query: 110 RVHG-FLSAES-----YFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMG 161
+HG F++ S + +K+ E YG L+ + ++ D+A S KM + G
Sbjct: 415 LIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCG 474
Query: 162 IALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGME 221
+ +T+ Y IM + K G+ + +L ++ PD+ G+
Sbjct: 475 LRPNTVIYTTIMDAFFKAGKESEAVALLHKI------PDS-----------------GL- 510
Query: 222 IILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISL 281
QP++V TY + KA I +A K E + Y LI
Sbjct: 511 --------QPNVV----TYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDG 558
Query: 282 YASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
+ +G+ S+ + L + Y ++++ MK G+ + A + + +G D
Sbjct: 559 FCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLD 618
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
I G+CN ++Q A +L +++ G TP+ A
Sbjct: 619 LYCYTCFISGFCNMNMMQEARGVLSEMI--GTGITPDKTA 656
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y +L++ +++Q A + KM E G+ L Y + + ++ VL+EM
Sbjct: 586 VYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEM 645
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES 229
I PD +Y I Y ++E + EMES
Sbjct: 646 IGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 139/323 (43%), Gaps = 16/323 (4%)
Query: 114 FLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM 173
FL+ +FS L E+ + + A+ VR++ + KA+S L+ L ++
Sbjct: 201 FLNLMKHFSKLSLHERVVEMFDAIXP-IVREKPSLKAIS---------TCLNLLVESNQS 250
Query: 174 CLYSKTGQYEKVPDVLTEMKAKNI-FPDNFSYRICINSYGARSDLEGMEIILREMESQPH 232
+ +K G + +V+ EMK ++ +P+ +Y IN L+ + EM S+
Sbjct: 251 SITAKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQ 310
Query: 233 IVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVL 292
I+ D TY + + + +D+A +++ ++ + Y+ L++ + G E
Sbjct: 311 ILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAK 370
Query: 293 RLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGY 352
++D K+ + Y T++ + G +EA ++LK+ + DT N ++ G
Sbjct: 371 EVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGL 430
Query: 353 CNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG 412
C G + A +LE L +G S+ +V G+ ++ Q + L G+G
Sbjct: 431 CREGRFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLML-----GRG 485
Query: 413 WKPDPKVITSILSKLGDEGSVQD 435
P +L L + G V D
Sbjct: 486 VLPHFATSNELLVHLCEAGKVGD 508
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 40/254 (15%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+N + + D+AL MK+ G + Y+ +M + K G+ E+ +V EM
Sbjct: 317 TYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEM 376
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K+ + PD Y IN F+ +A
Sbjct: 377 KSLGLKPDTVGYTTLIN------------------------------------FFCRAGR 400
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR-YINR-DY 310
+D+A ++LK E + D + +N ++ G E + LE+ + Y+N+ Y
Sbjct: 401 VDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGM--LERLPYEGVYLNKASY 458
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+L +L + GE ++A +++ G N +++ C G V +A L L+E
Sbjct: 459 RIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLE 518
Query: 371 KGKATTPNSWAVVA 384
G PNSWA++
Sbjct: 519 LGFKPEPNSWALLV 532
>gi|255661150|gb|ACU25744.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
gi|255661152|gb|ACU25745.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 426
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 182/437 (41%), Gaps = 79/437 (18%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRV-GEL---QRIIRDLRKRKRFSQALE 83
++ T ++I+ G G + L +W++ + RV G+L +I RK +S+A+
Sbjct: 8 DRYTYSTLITHFGKEGL-FDAAL-SWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 84 VSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT--YGALLN 139
+ + R G F P + +++ G+ F A S S +K T T Y LL
Sbjct: 66 IFSRLKRSG---FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTLLT 122
Query: 140 CYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP 199
YV ++ +ALS F +M+E+ L T N ++ +Y + G ++ + M+ I P
Sbjct: 123 MYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 200 DNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
+ SY + YG ++L G I L + + +I + TY S Y K +KA+++
Sbjct: 183 NVVSYNTLLRVYG-DAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
+++ + R + + I Y+ +IS++ K
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWG-----------------------------------K 266
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
+G+ + A + ++ SG D + +I+ Y GLV +A+ +L +L K P
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHEL--KRPDNIPRD 324
Query: 380 WAV-VAAG-------------YFDAGKTE--RGFQCMKAALSVY------------VEGK 411
A+ + AG DAG+ + F+ M S Y + G
Sbjct: 325 IAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGL 384
Query: 412 GWKPDPKVITSILSKLG 428
G+ PD VI +L+ G
Sbjct: 385 GYFPDSNVIALVLNAYG 401
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 124/313 (39%), Gaps = 38/313 (12%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKM-KEMGIALSTLTYNDIMCLYSKTGQYEKVP 186
+ + +++ LLN V+ ++ D F+ K+ GI + T N ++ K +
Sbjct: 202 QPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAI 261
Query: 187 DVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHF 246
VL EM A P+ +Y + Y ++ D+ G + E+ + V D +TY
Sbjct: 262 RVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDR-GWVPDPTTYTILMDG 320
Query: 247 YIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEK----- 299
Y K A V+ + EE + + + Y +I Y EVL L D LEK
Sbjct: 321 YCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPS 380
Query: 300 -TACKRYI---------------------------NRDYITMLEALMKLGEHEEAEKVLK 331
C R I N T++ L K G+ EA K+
Sbjct: 381 SALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFD 440
Query: 332 EWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAG 391
E+E G+ T NA+I G C G + A + +++VEKG ++ ++ G+ G
Sbjct: 441 EFE-KGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVG 499
Query: 392 KTERGFQCMKAAL 404
G + M+ L
Sbjct: 500 NAREGIRVMEEML 512
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 123/303 (40%), Gaps = 14/303 (4%)
Query: 137 LLNCYVRQ---RQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
L++C R RQ + L H M L TY+ +M K G+ K +V + M+
Sbjct: 88 LIHCTCRLGMLRQARRLLHH---MTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQ 144
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLI 253
PD Y + I+ G + ++ +L +M ++ I+ D TY
Sbjct: 145 KAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM-NRKGIMPDCRTYNIVIDVLSSCGRY 203
Query: 254 DKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYIT 312
+KA + R D + YN L++ L E L+D ++ C + + T
Sbjct: 204 EKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLT-TFGT 262
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+++ L K G E+A + G+ ++ I NA+I G+C +G V + +D++E
Sbjct: 263 LIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECS 322
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGS 432
++ ++ G+ + RG M L + +G P ++ L G
Sbjct: 323 CFPDSITYTILVLGF-----SRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQ 377
Query: 433 VQD 435
V+D
Sbjct: 378 VED 380
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 112/271 (41%), Gaps = 5/271 (1%)
Query: 105 LDLIGRVHGFLSAESYFSNLKDDEKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGI 162
+D +G+ A FSN++ T Y L++C +Q + D+AL M GI
Sbjct: 124 MDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGI 183
Query: 163 ALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEI 222
TYN ++ + S G+YEK MK + PD +Y +N +
Sbjct: 184 MPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACD 243
Query: 223 ILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLY 282
+ EM++ + D +T+ + KA ++ A + + + + YN LIS +
Sbjct: 244 LFDEMQAN-KCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGF 302
Query: 283 ASLGNKSEVLRLWDLEKTACKRYINR-DYITMLEALMKLGEHEEAEKVLKEWELSGNSYD 341
G + L+ + C + + Y ++ + G A ++L+E G++
Sbjct: 303 CRSGQVDKGYELFQ-DMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPA 361
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
N +I G V++A + ++++ KG
Sbjct: 362 LATYNVLIRSLSMAGQVEDAYTLFKEMIAKG 392
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 40/203 (19%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPC-DHAVQLDLIGRVHGFLSAESYFSNLKD 126
+I L K+ + +ALE+ + MNRKGI C + + +D++ + A S+F +K
Sbjct: 158 LISCLGKQGKVDEALELLEDMNRKGI--MPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKR 215
Query: 127 DEKT--YQTYGALLNCYVRQRQTDKALSHFRKMK-------------------------- 158
+ + TY LLN + R+TD+A F +M+
Sbjct: 216 RKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMED 275
Query: 159 ---------EMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
+MG ++ YN ++ + ++GQ +K ++ +M + FPD+ +Y I +
Sbjct: 276 ALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVL 335
Query: 210 SYGARSDLEGMEIILREMESQPH 232
+ R +L+EM + H
Sbjct: 336 GFSRRGHTSMAMELLQEMVREGH 358
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 164/400 (41%), Gaps = 57/400 (14%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIM---C-----------L 175
T TY L++C R + + AL+ F ++ G+ + + + ++ C L
Sbjct: 112 TSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDIL 171
Query: 176 YSKTGQYEKVPDV---------------------LTEMKAKN---IFPDNFSYRICINSY 211
+T + VPDV L M A+ PD +Y I+ +
Sbjct: 172 LHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGF 231
Query: 212 GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD 271
D+ + +EM Q I D TY+S H KA +DKA L++ + D
Sbjct: 232 FKEGDVNKACDLFKEM-VQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290
Query: 272 GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEK 328
YN LI Y+S G E +R++ K ++ I D + T++ +L K G+ +EA
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVF---KEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347
Query: 329 VLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYF 388
V + G + D ++ GY G + + + + ++ G A ++ V+ Y
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYA 407
Query: 389 DAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKLGDEGSVQD-VEAFVAALRT 445
+ G ++ A+ ++ E + P V+T ++++ L G + D +E F +
Sbjct: 408 NCGMLDK-------AMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460
Query: 446 VIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
+ ++ YH I+ +G EL+ + +G+ D
Sbjct: 461 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLD 500
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/356 (19%), Positives = 147/356 (41%), Gaps = 13/356 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+ Y DKA+ F +M++ G+ +TY ++ + G+ + + +M
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD ++Y I + L + ++ E+ + + LD + S + K
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN-GMRLDIVFFGSIINNLCKLGR 516
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
+ A ++ D + YN L+ Y +G + LR++D +A Y T
Sbjct: 517 VMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 576
Query: 313 MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
++ K+G +E + +E G T + N +I G G A+ ++ E G
Sbjct: 577 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 636
Query: 373 KATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKLGDE 430
A ++++V G F +C A+ ++ E + +IT ++++ +
Sbjct: 637 IAMNKCTYSIVLRGLFKN-------RCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 689
Query: 431 GSVQDVEAFVAAL-RTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDED 483
V++ + A++ R+ + Y I ++ G + +++ SM+ G + D
Sbjct: 690 RRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPD 745
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 153/412 (37%), Gaps = 95/412 (23%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++++ + R DKA + R+M G+ TYN+++ YS TGQ+++ V EM
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 317
Query: 193 K--------------------------AKNIF---------PDNFSYRICINSYGARSDL 217
+ A+++F PD FSY I +N Y + L
Sbjct: 318 RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCL 377
Query: 218 EGME-----------------------------------IILREMES---QPHIVLDWST 239
M II EM +PH+V +
Sbjct: 378 VDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTV 437
Query: 240 YASAAHFYIKANLIDKASDVLKKAEERLEQ---KDGIGYNFLISLYASLGNKSEVLRLWD 296
A+ I K D ++K + ++Q D Y+ LI + + G+ +L+ +
Sbjct: 438 IAALCR-------IGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS---LLKAKE 487
Query: 297 LEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
L + D + +++ L KLG +A+ + G D + N ++ GYC
Sbjct: 488 LISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYC 547
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
G ++ A + + +V G + + GY G+ + G + L KG
Sbjct: 548 LVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQ-----KGI 602
Query: 414 KPDPKVITSILSKLGDEG-SVQDVEAFVAALRTVIPMNRQMYHAFIKANIRN 464
KP + I+ L + G +V F + I MN+ Y ++ +N
Sbjct: 603 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKN 654
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 7/220 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y L++ Y + +KAL F M GI + + Y ++ Y K G+ ++ + EM
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K I P Y I I+ ++ EM ++ I ++ TY+ K
Sbjct: 598 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM-TESGIAMNKCTYSIVLRGLFKNRC 656
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
D+A + K+ + D I N +I A + V DL + + + +T
Sbjct: 657 FDEAIFLFKELRAMNVKIDIITLNTMI---AGMFQTRRVEEAKDLFASISRSGLVPCAVT 713
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI 349
M+ L+K G EEAE + + +G D+R+ N V+
Sbjct: 714 YSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 753
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 71/166 (42%), Gaps = 7/166 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +L + R D+A+ F++++ M + + +T N ++ +T + E+ D+ +
Sbjct: 643 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 702
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
+ P +Y I I + +E E + M++ +P D +K
Sbjct: 703 SRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEP----DSRLLNHVVRELLK 758
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW 295
N I +A L K +ER + + L+ L++S G E +R
Sbjct: 759 KNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 143/341 (41%), Gaps = 30/341 (8%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
QTY L++ R + +A F +++E G+ + TYN ++ K G +K +L E
Sbjct: 601 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 660
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
M K I PD +Y I I+ ++E + + ++E + + + TYA+ Y K+
Sbjct: 661 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR-GLTPNCVTYAAMVDGYCKSK 719
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRD 309
A +L++ R D YN +++ + L L+ LEK
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV---S 776
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAV-----IIGYCNNGLVQNAEAI 364
+ T++E K G+ +EA +L+E IPN V I C G++ A+ +
Sbjct: 777 FNTLIEGYCKSGKLQEANHLLEEM-----IEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL 831
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
++ E+ T ++ + GY + G +AL + KG +PD ++
Sbjct: 832 WLEMQERNVMPTAKTYTSLLHGYHNIGNMSE-----VSALFEEMVAKGIEPDKMTYYVMI 886
Query: 425 SKLGDEGSVQDV-----EAFVAALRTVIPMNRQMYHAFIKA 460
EG+V + E V + PM+ Y A I+A
Sbjct: 887 DAYCREGNVMEACKLKDEILVKGM----PMSVAAYDALIQA 923
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 146/363 (40%), Gaps = 33/363 (9%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
++ + K + +ALE+ M KG+ P L + G G A ++ L D+
Sbjct: 361 LLNGVCKAGKMEKALEIMQEMMEKGV---EPDSQTYSLLIEGHCRGQNMARAF--ELLDE 415
Query: 128 EK------TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQ 181
K T TY ++N R + R+M G+ + + Y +M ++K G+
Sbjct: 416 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 475
Query: 182 YEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG-----MEIILREMESQPHIVLD 236
E+ +L M+ + I PD F Y I + +E ME++ R + H
Sbjct: 476 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH---- 531
Query: 237 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
TY + Y KA ++ A + + Y LI + GN +E ++
Sbjct: 532 --TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF- 588
Query: 297 LEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
+ R + +D Y ++ L + G+ EA + E + G + N++I G C
Sbjct: 589 --RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSC 646
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
G V A +LE++ KG ++ ++ G AG+ ER L +EG+G
Sbjct: 647 KQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERA-----KNLFDDIEGRGL 701
Query: 414 KPD 416
P+
Sbjct: 702 TPN 704
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 138/338 (40%), Gaps = 48/338 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL++ ++RQ ++A +M GI + + +N ++ K G+ EK +++ EM
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PD+ +Y + I EG + +
Sbjct: 382 MEKGVEPDSQTYSLLI---------EG---------------------------HCRGQN 405
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN---KSEVLRLWDLEKTACKRYINRD 309
+ +A ++L + ++R + Y+ +I+ GN + +LR + +
Sbjct: 406 MARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVV--- 462
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y T++ A K G EE+ +L+ G D N++IIG+C ++ A L +++
Sbjct: 463 YTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEML 522
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
E+ +++ GY AG+ E + LS G P+ + T+++
Sbjct: 523 ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC-----GVLPNVGIYTALIEGHCK 577
Query: 430 EGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGK 466
EG+V + F L + + Q Y I RNGK
Sbjct: 578 EGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 615
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 117/284 (41%), Gaps = 13/284 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY A+++ Y + + A +M G+ YN I+ K ++EK D+ EM
Sbjct: 707 TYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM 766
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K F S+ I Y L+ +L EM + + + TY S KA +
Sbjct: 767 LEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEM-IEKQFIPNHVTYTSLIDHNCKAGM 824
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
+ +A + + +ER Y L+ Y ++GN SEV L++ E A + I D
Sbjct: 825 MGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFE-EMVA--KGIEPDKMT 881
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y M++A + G EA K+ E + G +A+I C +L ++
Sbjct: 882 YYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIG 941
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
E G + +V+A G+ AG + + +++ + GW
Sbjct: 942 ESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKF-----GW 980
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 160/361 (44%), Gaps = 25/361 (6%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ L++ Y + +A++ F K S L+ N ++ K + E V M
Sbjct: 148 FDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMC 207
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKA 250
A + PD ++Y I+++ +++ + +L EM + P++V TY +A
Sbjct: 208 AHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLV----TYNVIIGGLCRA 263
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEV-LRLWDLEKTACKRYINRD 309
L+D+A ++ + ++ D Y+ LI+ + E L L ++ K
Sbjct: 264 RLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPE-PIT 322
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ M+ G+ E+A ++ E G + I N ++ G C G ++ A I+++++
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKL 427
EKG +++++ G+ R F+ + E K K P V+T I++ L
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLD-------EMKKRKLAPTVLTYSVIINGL 435
Query: 428 GDEGSVQDVEAFV--AALRTVIPMNRQMYHAFIKANIRNGKGVDE---LLDSMKADGIDE 482
G++Q A + + + P N +Y + A+ + G+ V+E +L+ M+ GI
Sbjct: 436 CRCGNLQGTNAILREMVMNGLKP-NAVVYTTLMTAHAKEGR-VEESRMILERMREQGILP 493
Query: 483 D 483
D
Sbjct: 494 D 494
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 129/313 (41%), Gaps = 43/313 (13%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ + + A +M E G + + +TYN I+ + ++ ++ M
Sbjct: 217 TYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSM 276
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + PD ++Y I IN + +++L EM
Sbjct: 277 VDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEM------------------------- 311
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR-DYI 311
DV K E I YN LI + G+ + R+ D E AC N +
Sbjct: 312 ----IDVGLKPEP-------ITYNALIDGFMRQGDIEQAFRIKD-EMVACGIEANLIIWN 359
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T+L + K G+ E+A ++++E G D++ + +I G+C + A +L+++ ++
Sbjct: 360 TLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 419
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEG 431
A T +++V+ G G Q A L V G KP+ V T++++ EG
Sbjct: 420 KLAPTVLTYSVIINGLCRCGN----LQGTNAILREMVM-NGLKPNAVVYTTLMTAHAKEG 474
Query: 432 SVQDVEAFVAALR 444
V++ + +R
Sbjct: 475 RVEESRMILERMR 487
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 286 GNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSYDT 342
GNK E+ W + C + D Y M+ A K+G ++A++VL E G S +
Sbjct: 193 GNKVELF--WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNL 250
Query: 343 RIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA 402
N +I G C L+ A + +V+KG ++ ++ G+ ++ +
Sbjct: 251 VTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLE 310
Query: 403 ALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV---IPMNRQMYHAFIK 459
+ V G KP+P +++ +G ++ +AF V I N +++ +
Sbjct: 311 MIDV-----GLKPEPITYNALIDGFMRQGDIE--QAFRIKDEMVACGIEANLIIWNTLLN 363
Query: 460 ANIRNGK--GVDELLDSMKADGIDEDEETKEILV 491
+ GK E++ M G++ D +T +L+
Sbjct: 364 GVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 397
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 135/343 (39%), Gaps = 55/343 (16%)
Query: 117 AESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A S FS++ +D + TY L++ ++ ++KAL F +M + IA + T+N I+
Sbjct: 483 ASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIIN 542
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQP 231
K GQ + D L + P +Y ++ + +++ + REM P
Sbjct: 543 GLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSP 602
Query: 232 HIV-------------------------------LDWSTYASAAHFYIKANLIDKASDVL 260
++V LD + Y++ + K ++ A D+
Sbjct: 603 NVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLF 662
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR-------DYITM 313
+ E + I YN +IS + L N L +W K+ IN Y T+
Sbjct: 663 FELLEVGLSPNRIVYNSMISGFRDLNNMEAAL-VW------YKKMINDRIPCDLGTYTTL 715
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
++ L+K G A + E G D + ++ G CN G ++NA ILE++ K
Sbjct: 716 IDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNM 775
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
+ + + AGYF G + F L +G PD
Sbjct: 776 TPSVLIYNTLIAGYFREGNLKEAFTLHDEMLD-----RGLVPD 813
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/395 (19%), Positives = 159/395 (40%), Gaps = 40/395 (10%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ + + D+A S M G+ + ++YND++ + + G + V ++M
Sbjct: 431 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 490
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
A+++ P+ +Y I I+ + D E + +M S D+ T+ + + K
Sbjct: 491 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDF-TFNTIINGLCKVGQ 549
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
+ +A D LK E + YN ++ + GN L ++ + C+ ++ +
Sbjct: 550 MSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVY---REMCEFGVSPNVVT 606
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ K + A K E G D +A+I G+C +++A+ + +L+
Sbjct: 607 YTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELL 666
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGF-----------QCMKAALSVYVEG-------- 410
E G + + + +G+ D E C + ++G
Sbjct: 667 EVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLV 726
Query: 411 -----------KGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFI 458
KG PD +++ L ++G +++ + + R + + +Y+ I
Sbjct: 727 FASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLI 786
Query: 459 KANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
R G K L D M G+ D+ T +IL+
Sbjct: 787 AGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI 821
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 25/294 (8%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
+L+ Y Q D AL+ F K+ E G+ + +TY+ ++ +G EK ++ T+MK
Sbjct: 330 SLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLN 389
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
I P F+ + Y E + E V + TY + K +D+
Sbjct: 390 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG--VANIFTYNIMMSWLCKGGKMDE 447
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD------ 309
A +L + + + YN +I + GN D+ + + RD
Sbjct: 448 ACSLLDNMVNQGMVPNVVSYNDMILGHCRKGN-------MDMASSVFSDMLARDLKPNVV 500
Query: 310 -YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP-NAVIIGYCNNGLVQNAEAILED 367
Y +++ K G+ E+A + + LS N T N +I G C G + A L++
Sbjct: 501 TYSILIDGNFKKGDSEKALDLFDQM-LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKN 559
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
+E+G + ++ + G+ G + +AL+VY E + P V+T
Sbjct: 560 FLEEGFIPSCMTYNSIVDGFIKEGNID-------SALAVYREMCEFGVSPNVVT 606
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 131/328 (39%), Gaps = 19/328 (5%)
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
D E ++ + LLN Y+R + + A+ F M + N ++ + ++
Sbjct: 145 DFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGEL 204
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
D+ +M + I+ D+F+ + + + +E E RE + + + LD Y+
Sbjct: 205 RDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKER-GVKLDAGAYSIIIQ 263
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
K + ++L++ +ER + +I + GN E LRL + E C +
Sbjct: 264 AVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKE-EMINCGKP 322
Query: 306 INRDYIT-MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII-GYCNNGLVQNAEA 363
+N T +++ G + A + + G + ++ +V+I G CN+G ++ A
Sbjct: 323 MNLVVATSLMKGYCAQGNLDSALNLFNKITEDG-LFPNKVTYSVLIEGCCNSGNIEKASE 381
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG------------K 411
+ + G + + + GY A E + A+ V K
Sbjct: 382 LYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCK 441
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAF 439
G K D S+L + ++G V +V ++
Sbjct: 442 GGKMDEA--CSLLDNMVNQGMVPNVVSY 467
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 70/374 (18%), Positives = 139/374 (37%), Gaps = 53/374 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T ++ +++ + ++A +FR+ KE G+ L Y+ I+ K ++L EM
Sbjct: 222 TVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEM 281
Query: 193 KAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K + P ++ I + A+ ++ E + L+E ++ S Y
Sbjct: 282 KERGWVPSEATFTSVIVACVAQGNMVEALR--LKEEMINCGKPMNLVVATSLMKGYCAQG 339
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+D A ++ K E + + Y+ LI + GN + L+ K +
Sbjct: 340 NLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVN 399
Query: 312 TMLEALMKLGEHEEAEKVLKE-----------------WELSGNSYDT------------ 342
++L +K EEA K+ E W G D
Sbjct: 400 SLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQG 459
Query: 343 RIPNAV-----IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+PN V I+G+C G + A ++ D++ + +++++ G F G +E+
Sbjct: 460 MVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKAL 519
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV------EAFVAALRTVIPMNR 451
LS+ + + + I + L K+G +D E F+ + T
Sbjct: 520 DLFDQMLSLNIAPTDFTFN--TIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT------ 571
Query: 452 QMYHAFIKANIRNG 465
Y++ + I+ G
Sbjct: 572 --YNSIVDGFIKEG 583
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 170/426 (39%), Gaps = 22/426 (5%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDD 127
+ RD+R AL ++ M +GI +++ + G+++ SA++ F K +
Sbjct: 324 VARDMRG------ALSCTEEMKAEGI-ELTIVTYSILISGFGKINDTQSADNLFKEAKTN 376
Query: 128 EKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
Y +++ + + D+A +M+E GI Y+ +M Y+ +K
Sbjct: 377 LGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKC 436
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
V +K P SY IN Y + I +EMES I + TY+
Sbjct: 437 LIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSG-IKHNNKTYSMLIS 495
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
+I + A + ++ + Q D YN LI + +GN +R+ LEK +R
Sbjct: 496 GFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRI--LEKMQKERM 553
Query: 306 --INRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEA 363
NR + ++E G+ + A +L SG + NA+I G V+ A +
Sbjct: 554 QPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVS 613
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
+L + G +++ ++ GY G + F+ ++ G K D + ++
Sbjct: 614 VLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYF-----TKIKEGGLKLDVYIYETL 668
Query: 424 LSKLGDEGSVQDVEAFVAALRTV-IPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGI 480
L G +Q A + + I N +Y+ I R G +L+ MK DG+
Sbjct: 669 LRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGV 728
Query: 481 DEDEET 486
+ T
Sbjct: 729 PPNIHT 734
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 124/286 (43%), Gaps = 3/286 (1%)
Query: 117 AESYFSNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A + F N++ E + +L++ Y R ALS +MK GI L+ +TY+ ++
Sbjct: 296 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILIS 355
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIV 234
+ K + ++ E K + Y I+++ +++ E ++ EME + I
Sbjct: 356 GFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEME-EDGID 414
Query: 235 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 294
Y S H Y K V ++ +E I Y LI+LY +G ++ + +
Sbjct: 415 APIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAI 474
Query: 295 WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCN 354
+++ ++ N+ Y ++ + L + A ++ +E SG D I N +I +C
Sbjct: 475 SKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCK 534
Query: 355 NGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCM 400
G + A ILE + ++ + ++ + G+ AG +R +
Sbjct: 535 MGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDIL 580
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 36/239 (15%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
T TY AL++ +R+ Q ++A+S KM GI + TY IM Y+ TG K +
Sbjct: 591 TVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYF 650
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
T++K + D + Y + + ++ + REM SQ I + Y + +
Sbjct: 651 TKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQ-KIARNTFVYNILIDGWAR 709
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ +A+D++K+ +E DG+ N I Y S YIN
Sbjct: 710 RGDVWEAADLMKQMKE-----DGVPPN--IHTYTS--------------------YIN-- 740
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
A K G+ + A+ V+ E G + + +I G+ L A E++
Sbjct: 741 ------ACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEM 793
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/361 (18%), Positives = 141/361 (39%), Gaps = 50/361 (13%)
Query: 172 IMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQP 231
++ Y+K G M+A+ I P+ F + +++Y D+ G EM+++
Sbjct: 283 MIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEG 342
Query: 232 HIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGN---- 287
I L TY+ + K N A ++ K+A+ L +GI Y+ +I + GN
Sbjct: 343 -IELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRA 401
Query: 288 -------------------------------KSEVLRLWDLEKTACKRYINRDYITMLEA 316
+ + L +++ K C Y ++
Sbjct: 402 EELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINL 461
Query: 317 LMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATT 376
+K+G+ +A + KE E SG ++ + + +I G+ + NA I E++++ G
Sbjct: 462 YVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPD 521
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV 436
+ ++ + G +R + ++ ++ + +P + I+ G ++
Sbjct: 522 RAIYNLLIEAFCKMGNMDRAIRILEK-----MQKERMQPSNRAFRPIIEGFAVAGDMKRA 576
Query: 437 EAFVAALR------TVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490
+ +R TV+ N + H I+ N + +L+ M GI +E T I+
Sbjct: 577 LDILDLMRRSGCAPTVMTYN-ALIHGLIRKN--QVERAVSVLNKMSIAGITPNEHTYTII 633
Query: 491 V 491
+
Sbjct: 634 M 634
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 161/406 (39%), Gaps = 42/406 (10%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E ++Y LLN +V +Q K S F + G+A + TYN ++ + K ++EK
Sbjct: 111 EPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARG 170
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
L M + PD FSY IN L+ + EM S+ + D + Y +
Sbjct: 171 FLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM-SERGVAPDVTCY----NIL 225
Query: 248 IKANLIDKASDVLKKAEERLEQKDGI-----GYNFLISLYASLGNKSEVLRLWDLEKTAC 302
I L +K + +RL + + +N +IS + G + L++W+ K
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 303 KRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNA- 361
+ Y +++ L G ++AE V E + S D N ++ G+C G ++ +
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESL 345
Query: 362 -----------------EAILEDLVEKGKATTPNS-WAVVAAGYFDAGKTERGF----QC 399
+++ L+E GK W ++ A + A KT G C
Sbjct: 346 ELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLC 405
Query: 400 MKA----ALSVY--VEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQ 452
+ AL V VE G D SI+ L + +++ V + + + +N
Sbjct: 406 VNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSH 465
Query: 453 MYHAFIKANIRNGK--GVDELLDSMKADGIDEDEETKEILVCTMEK 496
+ +A I IR+ + L M +G + IL+C + K
Sbjct: 466 VCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCK 511
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 175/458 (38%), Gaps = 86/458 (18%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPC---------- 99
LD K G K V +I DL K + ALE+ D M+ +G+ C
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231
Query: 100 --DHAVQLDLIGRVHGFLSAESYFSNLK---------------DD-------------EK 129
DH ++L R+ L S + N+K DD EK
Sbjct: 232 EKDHKTAMELWDRL---LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
TY +L++ DKA S F ++ E ++ +TYN ++ + + G+ ++ ++
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
M+ KN + SY I I ++ +I R M ++ + D +TY H
Sbjct: 349 RIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA-DKTTYGIFIHGLCV 406
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
++KA V+++ E D +YA
Sbjct: 407 NGYVNKALGVMQEVESSGGHLD---------VYA-------------------------- 431
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y ++++ L K EEA ++KE G ++ + NA+I G + + A L ++
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG 491
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGD 429
+ G T S+ ++ G AGK +K L GWKPD K + +L L
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE-----NGWKPDLKTYSILLCGLCR 546
Query: 430 EGSVQ-DVEAFVAALRTVIPMNRQMYHAFIKANIRNGK 466
+ + +E + L++ + + M++ I GK
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 123/301 (40%), Gaps = 39/301 (12%)
Query: 74 KRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT 133
K+K F +A DWM ++G F P FS
Sbjct: 161 KKKEFEKARGFLDWMWKEG---FKP--------------------DVFS----------- 186
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE-M 192
Y ++N + + D AL F +M E G+A YN ++ + K ++ ++ +
Sbjct: 187 YSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ +++P+ ++ I I+ ++ I M+ Q D TY+S H A
Sbjct: 247 EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMK-QNEREKDLYTYSSLIHGLCDAGN 305
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN-RDYI 311
+DKA V + +ER D + YN ++ + G E L LW + + K +N Y
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEH--KNSVNIVSYN 363
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+++ L++ G+ +EA + + G + D I G C NG V A +++++
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 372 G 372
G
Sbjct: 424 G 424
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 101/256 (39%), Gaps = 9/256 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
Y ++++C ++++ ++A + ++M + G+ L++ N ++ + + + L EM
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
P SY I I ++EM +P D TY+ +
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP----DLKTYSILLCGLCR 546
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINR 308
ID A ++ + + + D + +N LI S+G + + + ++E C +
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANL-V 605
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y T++E K+G+ A + G D N ++ G C V A +D
Sbjct: 606 TYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDA 665
Query: 369 VEKGKATTPNSWAVVA 384
G T +W ++
Sbjct: 666 RNHGIFPTVYTWNILV 681
>gi|255661134|gb|ACU25736.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
gi|255661138|gb|ACU25738.1| pentatricopeptide repeat-containing protein [Verbena halei]
gi|255661140|gb|ACU25739.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 426
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 182/437 (41%), Gaps = 79/437 (18%)
Query: 28 NKTTLYSIISPLGNPGTRIEPELDNWVKNGNKVRV-GEL---QRIIRDLRKRKRFSQALE 83
++ T ++I+ G G + L +W++ + RV G+L +I RK +S+A+
Sbjct: 8 DRYTYSTLITHFGKEGL-FDAAL-SWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 84 VSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQT--YGALLN 139
+ + R G F P + +++ G+ F A S S ++ T T Y LL
Sbjct: 66 IFSRLKRSG---FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 140 CYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFP 199
YV ++ +ALS F +M+E+ L T N ++ +Y + G ++ + M+ I P
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 200 DNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDV 259
+ SY + YG ++L G I L + + +I + TY S Y K +KA+++
Sbjct: 183 NVVSYNTLLRVYGD-AELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 260 LKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMK 319
+++ + R + + I Y+ +IS++ K
Sbjct: 242 IQEMQNRGIEPNSITYSTIISIWG-----------------------------------K 266
Query: 320 LGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNS 379
+G+ + A + ++ SG D + +I+ Y GLV +A+ +L +L K P
Sbjct: 267 VGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHEL--KRPDNIPRD 324
Query: 380 WAV-VAAG-------------YFDAGKTE--RGFQCMKAALSVY------------VEGK 411
A+ + AG DAG+ + F+ M S Y + G
Sbjct: 325 IAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGL 384
Query: 412 GWKPDPKVITSILSKLG 428
G+ PD VI IL+ G
Sbjct: 385 GYFPDSNVIALILNAYG 401
>gi|410110091|gb|AFV61125.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
micrantha]
Length = 406
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 156/364 (42%), Gaps = 25/364 (6%)
Query: 73 RKRKRFSQALEVSDWMNRKGICVFAP--CDHAVQLDLIGRVHGFLSAESYFSNLKDDEKT 130
RK +S+A+ + + R G F P + +++ G+ F A S S +K
Sbjct: 27 RKLCDYSKAISIFSRLKRSG---FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVM 83
Query: 131 YQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDV 188
T Y LL YV ++ +ALS F +M+E+ L T N ++ +Y + G ++ +
Sbjct: 84 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 143
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
M+ I P+ SY + YG ++L G I L + + +I + TY S Y
Sbjct: 144 FWGMRKMGIEPNVVSYNTLLRVYG-DAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYG 202
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K +KA++++++ + R + + I Y+ +IS++ +G L+ +++
Sbjct: 203 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 262
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP-NAVIIGYCNNGLVQNAEAILED 367
+ TM+ A + G A+++L E + N IP + I G ++ A +
Sbjct: 263 LFQTMIVAYERAGLVAHAKRLLHELKRPDN-----IPRDTAIHILAGAGRIEEATYVFRQ 317
Query: 368 LVEKGKA---TTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
++ G+A T + + Y F M+ G G+ PD VI +L
Sbjct: 318 AIDAGEAKDITVFERMIHLLSKYKKYSNVVEVFDKMR--------GLGYFPDSNVIAVVL 369
Query: 425 SKLG 428
+ G
Sbjct: 370 NAYG 373
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/257 (18%), Positives = 109/257 (42%), Gaps = 6/257 (2%)
Query: 151 LSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINS 210
LS +KM++ + + Y++++ L K Y K + + +K PD +Y IN
Sbjct: 1 LSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 60
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
+G ++ EM++ ++ + ++Y++ Y++ +A V + E
Sbjct: 61 FGKAKLFREARSLISEMKT-AGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLL 119
Query: 271 DGIGYNFLISLYASLGNKSEVLRL-WDLEKTACKRYINRDYITMLEALMKLGEHEEAEKV 329
D N +I +Y LG E +L W + K + + Y T+L EA +
Sbjct: 120 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV-VSYNTLLRVYGDAELFGEAIHL 178
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
+ + + N++I+ Y + A +++++ +G +++ + + +
Sbjct: 179 FRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 238
Query: 390 AGKTERG---FQCMKAA 403
GK +R FQ ++++
Sbjct: 239 VGKLDRAAMLFQKLRSS 255
>gi|326522967|dbj|BAJ88529.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 124/305 (40%), Gaps = 54/305 (17%)
Query: 100 DHAVQLDLIG-------RVHGFLSAESYFSNLKDDEKTYQ---TYGALLNCYVRQRQTDK 149
D +V LIG + + A YF +K E+ TY LL R T +
Sbjct: 156 DTSVYNSLIGAHLHSRDKSKALVKALGYFDKMKGMERCQPNIVTYNILLRACARASDTKQ 215
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
F+ + E ++ TYN ++ Y K G ++ VL MK+K PD ++ I I+
Sbjct: 216 VDILFKDLDESIVSPDIYTYNGVIDGYGKNGMITEMESVLVRMKSKQCRPDVITFNILID 275
Query: 210 SYGARSDLEGMEII----LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEE 265
SYG + + ME + LR E H T+ S Y KA L +KA V++K +E
Sbjct: 276 SYGRKQTFDKMEQVFKSLLRSKERPTH-----PTFNSMITNYGKARLREKAESVIEKMQE 330
Query: 266 RLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEE 325
+ + + LI++YA S+ +++D ++ L +L
Sbjct: 331 LGFKPNYVTQECLINMYAYCDCVSKAQQIFD-------ELVSSQSTVPLSSL-------- 375
Query: 326 AEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAA 385
NA++ YC N L A+ +L+ +EKG + +++ ++
Sbjct: 376 --------------------NAMLDAYCMNRLPMEADRLLDTAIEKGVVPSASTYKLLYR 415
Query: 386 GYFDA 390
Y A
Sbjct: 416 AYTRA 420
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 134/328 (40%), Gaps = 30/328 (9%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ Y R D+A++ +++M E G+ +YN ++ ++ G +++ VL EM
Sbjct: 211 TFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEM 270
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAAHFYIK 249
K P+ +Y +++Y ++E M + E+ S +P VL + K
Sbjct: 271 KDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVL----LKTLVLVNSK 326
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+L+ + + +R D N ++S+Y ++ + D K
Sbjct: 327 CDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTT 386
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ + E +E++L+E G D N VI YC NG +++A +L ++
Sbjct: 387 YNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMR 446
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG---------KGWKPDPKVI 420
E G A ++ A Y AA S++VE G KP+
Sbjct: 447 ESGPAPDIITYNTFIASY--------------AADSMFVEAIDVVCYMIKHGCKPNQSTY 492
Query: 421 TSILSKLGDEGSVQDVEAFVAALRTVIP 448
SI+ + FV LR + P
Sbjct: 493 NSIVDWYCKLNRRDEASMFVNNLRKLDP 520
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 146/349 (41%), Gaps = 33/349 (9%)
Query: 150 ALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICIN 209
AL +M E GI TY ++ + K G+ + + EM+ + P+ ++ I
Sbjct: 88 ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIK 147
Query: 210 SYGARSDL-EGMEII--LREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEER 266
+G R E M++ ++ + P IV W+T S + + + + S V K+ +
Sbjct: 148 MHGNRGKFTEMMKVFEDIKTFQCSPDIV-TWNTLLSV---FGQNGMDSEVSGVFKEMKRA 203
Query: 267 LEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD---YITMLEALMKLGEH 323
+ +N LIS Y+ G+ + + ++ K + +N D Y +L AL + G
Sbjct: 204 GFVPERDTFNTLISSYSRCGSFDQAMAVY---KRMLEAGVNPDLSSYNAVLAALARGGLW 260
Query: 324 EEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL---VEKGKATTPNSW 380
+++EKVL E + + +++ Y N ++ A+ E++ + + +A +
Sbjct: 261 KQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTL 320
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
+V + +TER F + + +G+ PD + +++S G V +
Sbjct: 321 VLVNSKCDLLMETERAF--------LELRQRGFSPDITTLNAMVSIYGRRQMVAKANEIL 372
Query: 441 AALR------TVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDED 483
++ ++ N MY AN +E+L + A GI D
Sbjct: 373 DCMKRGGFTPSLTTYNSLMYMYSRSANFERS---EEILREILAKGIRPD 418
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 141/345 (40%), Gaps = 43/345 (12%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLS-----AESYFS 122
+ + + +R RF A + M +GI P H + + G FLS A +F
Sbjct: 121 LFKVIMRRGRFMMAKRYFNKMLSEGI---EPTRHTFNVMIWG---FFLSGKVETANRFFE 174
Query: 123 NLKDDEKTYQ--TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTG 180
++K E + TY ++N Y R ++ ++A +F +MK I + +TY ++ Y
Sbjct: 175 DMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVD 234
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY 240
Q + ++ EMK I P+ +Y + + IL+EM + D S +
Sbjct: 235 QVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIF 294
Query: 241 ASAAHFYIKANLIDKASDVLKKAEERLEQKDGIG-YNFLISLYASLGNKSEVLRLWDLEK 299
+ K +D A+DVL KA RL G Y LI Y G + ++L D
Sbjct: 295 MRLISSHCKVGNLDAAADVL-KAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLD--- 350
Query: 300 TACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQ 359
+ I +D I ++ + + ++Y N ++ CNNG
Sbjct: 351 ----KLIEKDIIVRPQSTL---------------HMEPSAY-----NPIVEYLCNNGQTS 386
Query: 360 NAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAAL 404
AEA++ L++ G P + + G+ G + F+ +K L
Sbjct: 387 KAEALVRQLMKLG-VQDPTALNTLIRGHSQEGSPDSAFELLKIML 430
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 153/366 (41%), Gaps = 31/366 (8%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
E+T ++Y AL +R+ + A +F KM GI + T+N ++ + +G+ E
Sbjct: 112 ERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANR 171
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHIVLDWSTYASAA 244
+MK++ I PD +Y IN Y +E E EM+ +P +V TY +
Sbjct: 172 FFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVV----TYTTLI 227
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
Y+ + +D A ++++ + + + I Y+ +L L N ++ + K +
Sbjct: 228 KGYVSVDQVDDALRLVEEMKGYGIKPNAITYS---TLLPGLCNAEKMSEARSILKEMVDK 284
Query: 305 YI----NRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
YI N ++ ++ + K+G + A VLK + +I YC G
Sbjct: 285 YIAPTDNSIFMRLISSHCKVGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQ 344
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDA--------GKTERGFQCMKAALSVYVEGKG 412
A +L+ L+EK P S + ++ G+T + ++ + + V+
Sbjct: 345 AVKLLDKLIEKDIIVRPQSTLHMEPSAYNPIVEYLCNNGQTSKAEALVRQLMKLGVQ--- 401
Query: 413 WKPDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD-- 469
DP + +++ EGS E LR + + Y + +++ ++ + D
Sbjct: 402 ---DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKSEPADAK 458
Query: 470 ELLDSM 475
LDSM
Sbjct: 459 AALDSM 464
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/428 (18%), Positives = 169/428 (39%), Gaps = 9/428 (2%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNL--KDDEK 129
L K AL+ W+ R + H ++++GR A ++ K E
Sbjct: 19 LHGAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEW 78
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ +++ Y ++ +++ F+KM+E+G+ + +Y+ + + + G++
Sbjct: 79 DEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYF 138
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+M ++ I P ++ + I + +E +M+S+ I D TY + + Y +
Sbjct: 139 NKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVITYNTMINGYCR 197
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+++A + + + + + Y LI Y S+ + LRL + K +
Sbjct: 198 VKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAIT 257
Query: 310 YITMLEALMKLGEHEEAEKVLKEW-ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y T+L L + EA +LKE + D I +I +C G + A +L+ +
Sbjct: 258 YSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSHCKVGNLDAAADVLKAM 317
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS---VYVEGKGWKPDPKVITSILS 425
+ T + V+ Y AG+ ++ + + + + +P I+
Sbjct: 318 IRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQSTLHMEPSAYNPIVE 377
Query: 426 KLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGK--GVDELLDSMKADGIDED 483
L + G EA V L + + + I+ + + G ELL M +D +
Sbjct: 378 YLCNNGQTSKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSE 437
Query: 484 EETKEILV 491
+ + LV
Sbjct: 438 KSAYDSLV 445
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 125/286 (43%), Gaps = 10/286 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY ++L+ Y Q +A+ +KM+ G+ +TYN +M K G+ + + M
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ + PD +Y + Y + L M +L ++ + I D + Y K
Sbjct: 328 TKRGLEPDIATYCTLLQGYATKGALVEMHALL-DLMVRNGIHPDHHVFNILICAYAKQEK 386
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYINRDY 310
+D+A V K + + + Y +I + G+ + + ++ +++ I Y
Sbjct: 387 VDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIV--Y 444
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
+++ +L + ++AE+++ E G +T N++I +C G V +E + + +V
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR 504
Query: 371 KGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
G +++ + GY AGK + + + + SV G KPD
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV-----GMKPD 545
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 143/342 (41%), Gaps = 24/342 (7%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGIC---VFAP-------C 99
L N VK G +V +++ L KR S A+++ + C VF+ C
Sbjct: 110 LGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLC 169
Query: 100 DHAVQLDLIGRVHGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKE 159
D + + +H + A+ D +Y T ++N + ++ +DKA S + +M +
Sbjct: 170 DENRSQEALELLH--MMADDRGGGSAPDVVSYTT---VINGFFKEGDSDKAYSTYHEMLD 224
Query: 160 MGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEG 219
I+ +TY+ I+ K +K +VLT M + P+ +Y ++ Y + +
Sbjct: 225 RRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKE 284
Query: 220 MEIILREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYN 276
L++M S +P +V TY S + K +A + +R + D Y
Sbjct: 285 AIGFLKKMRSDGVEPDVV----TYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYC 340
Query: 277 FLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
L+ YA+ G E+ L DL + + ++ A K + +EA V +
Sbjct: 341 TLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQH 400
Query: 337 GNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
G + + AVI C +G V +A E ++++G TPN
Sbjct: 401 GLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG--LTPN 440
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 147/372 (39%), Gaps = 57/372 (15%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAE------SYF 121
II L K + +A+EV M + G+ +++ +HG+ S+E +
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI-------LHGYCSSEQPKEAIGFL 289
Query: 122 SNLKDD--EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKT 179
++ D E TY +L++ + ++ +A F M + G+ TY ++ Y+
Sbjct: 290 KKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATK 349
Query: 180 GQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLD 236
G ++ +L M I PD+ + I I +Y + ++ ++ +M P++V
Sbjct: 350 GALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV-- 407
Query: 237 WSTYASAAHFYIKANLIDKAS----------------------------DVLKKAEER-L 267
TY + K+ +D A D KAEE L
Sbjct: 408 --TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELIL 465
Query: 268 EQKD------GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLG 321
E D I +N +I + G E +L+DL + Y T+++ G
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAG 525
Query: 322 EHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+ +EA K+L G D N +I GYC + +A A+ +++V G + ++
Sbjct: 526 KMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 585
Query: 382 VVAAGYFDAGKT 393
++ G F +T
Sbjct: 586 IILQGLFHTRRT 597
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 124/347 (35%), Gaps = 49/347 (14%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MCLYSKTG------ 180
T TYG L+ C R + D + + + G + +T+ + +C +T
Sbjct: 86 TVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIV 145
Query: 181 -----QYEKVPDV---------------------LTEMKAKN----IFPDNFSYRICINS 210
+ +PDV L M A + PD SY IN
Sbjct: 146 LRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVING 205
Query: 211 YGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQK 270
+ D + EM + I D TY+S K +DKA +VL +
Sbjct: 206 FFKEGDSDKAYSTYHEMLDR-RISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264
Query: 271 DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVL 330
+ + YN ++ Y S E + ++ Y ++++ L K G EA K+
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324
Query: 331 KEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDA 390
G D ++ GY G + A+L+ +V G + + ++ Y
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384
Query: 391 GKTERGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKLGDEGSVQD 435
K + A+ V+ + + +P V+T +++ L GSV D
Sbjct: 385 EKVDE-------AMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDD 424
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 106/245 (43%), Gaps = 13/245 (5%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
+ ++++ + ++ + ++ F M +G+ + +TY+ ++ Y G+ ++ +L+ M
Sbjct: 479 FNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMF 538
Query: 194 AKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIKA 250
+ + PD +Y IN Y S ++ + +EM S P+I+ TY
Sbjct: 539 SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNII----TYNIILQGLFHT 594
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDY 310
A ++ + Q + YN ++ E LR++ + R +
Sbjct: 595 RRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 654
Query: 311 ITMLEALMKLGEHEEAEKVLKEWELSG---NSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
M+ AL+K+G ++EA+ + + +G N + R+ IIG GL++ + +
Sbjct: 655 NIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG---QGLLEELDQLFFS 711
Query: 368 LVEKG 372
+ + G
Sbjct: 712 MEDNG 716
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 47/97 (48%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TY +L+ + TD+AL F+ + + L T T+N ++ K G+ ++ D+
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVA 676
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREME 228
+ + P+ ++YR+ + + LE ++ + ME
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSME 713
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 153/370 (41%), Gaps = 15/370 (4%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y L+ R ++ D+A +M + G + +TY ++ K G+ ++ D+ + M
Sbjct: 89 SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ PD Y + I+ + + D+ + EM + I + TY S + +
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF-TYNSLLSGFSRKGE 207
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYI 311
+ + K + + +N L+ + +G+ E RL+ ++ C + Y
Sbjct: 208 FGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV-VSYN 266
Query: 312 TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
T++ + G+ EA+++L+E SG D N +I GY +G + +A + ++ +
Sbjct: 267 TLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKS 326
Query: 372 GKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG-DE 430
G S++ + AGK F K ++ G PD V+ ++ L E
Sbjct: 327 GLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA-----NGSAPDAAVVIPLVIGLCRGE 381
Query: 431 GSVQDVEAFVAALR----TVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEET 486
+ E F A ++ +IP + + KA + V E+ + G D E
Sbjct: 382 RLTESCELFQAMVKFECVPLIPEYNLLMYKLCKA--KRSDDVCEIFHELTERGFSPDVEI 439
Query: 487 KEILVCTMEK 496
++++ T+ +
Sbjct: 440 SKVILETLRR 449
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 130/346 (37%), Gaps = 49/346 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
+Y LL + + D + M G +T TY ++ + ++E+ V M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
A+ P+ FSY I I ++ +L EM QP++V TY S K
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVV----TYGSLLSGLCK 134
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD--LEKTACKRYIN 307
+ +A D+ + R DG+ YN LI ++ G+ E RL++ LEK
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194
Query: 308 RDYI---------------------------------TMLEALMKLGEHEEAEKVLKEWE 334
+ + +L+ K+G+ EA ++ E
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR 254
Query: 335 LSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTE 394
G D N ++ G C+ G A+ +L +++ G S+ ++ GY +G +
Sbjct: 255 SLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALD 314
Query: 395 RGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFV 440
+ L + G +PD ++I+ L G V AFV
Sbjct: 315 HAIK-----LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVG--AAFV 353
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 63/330 (19%), Positives = 131/330 (39%), Gaps = 53/330 (16%)
Query: 50 LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCD---HAVQLD 106
L+ + G++ V ++ L K + +A+++ M +G P D + V +D
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRG----CPPDGVVYNVLID 165
Query: 107 LIGRVHGFLSAESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIAL 164
+ A F + K T TY +LL+ + R+ + + S F+ M G
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP 225
Query: 165 STLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIIL 224
+ T+N+++ + K G + + EM++ PD SY + ++ + +L
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLL 285
Query: 225 REMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYAS 284
REM I++ + D + YN LI Y+
Sbjct: 286 REM--------------------IRSGV----------------GPDIVSYNILIDGYSK 309
Query: 285 LGNKSEVLRL-WDLEKTACKRYINRD---YITMLEALMKLGEHEEAEKVLKEWELSGNSY 340
G ++L +++ K+ + D Y T+++ L + G+ A V K+ +G++
Sbjct: 310 SGALDHAIKLFYEIPKSG----LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAP 365
Query: 341 DTRIPNAVIIGYCNNGLVQNAEAILEDLVE 370
D + ++IG C + + + + +V+
Sbjct: 366 DAAVVIPLVIGLCRGERLTESCELFQAMVK 395
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 161/389 (41%), Gaps = 41/389 (10%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG ++N ++ D AL+ KM+ I + + +N I+ K E D+ TEM
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Query: 193 KAKNIFPDNFSYRI---CINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
+ K I P+ +Y C+ +YG SD + + E + P++V T+ + + K
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV----TFNALIDAFFK 340
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA-CKRYINR 308
+ +A + ++ +R D I YN LI+ + E +++ + C I +
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI-Q 399
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
Y T++ K E+ ++ +E G +T +I G+ G +A+ + + +
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMK------AALSVYV-------------E 409
V T +++++ G GK + K L++++
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKV 519
Query: 410 GKGW--------KPDPKVITSILSKLGDEGSVQDVEAFVAALRT--VIPMNRQMYHAFIK 459
G+ W KPD +++S L + +Q+ + ++ +P N Y+ I+
Sbjct: 520 GEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP-NSGTYNTLIR 578
Query: 460 ANIRNG--KGVDELLDSMKADGIDEDEET 486
AN+R+ EL+ M++ G D T
Sbjct: 579 ANLRDCDRAASAELIKEMRSSGFVGDAST 607
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 105/484 (21%), Positives = 190/484 (39%), Gaps = 77/484 (15%)
Query: 39 LGNPGTRIEPELDNWVKNGNKVRV-----GELQRIIRDLRKRKRFSQALEVSDWMNRKGI 93
+GNP T P N +G R G+ + I+R+ R S ++V D ++ G
Sbjct: 21 IGNPPT--VPSFFNLCGSGCWERSFASASGDYREILRN-----RLSDIIKVDDAVDLFGD 73
Query: 94 CVFA-PCDHAVQ----LDLIGRVHGF---LSAESYFSNLKDDEKTYQTYGALLNCYVRQR 145
V + P V+ L + +++ F +S L Y TY +NC+ R+
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY-TYSIFINCFCRRS 132
Query: 146 QTDKALSHFRKMKEMG-----IALSTLT--------YNDIMCLYSKTGQYEKVPDVLT-- 190
Q AL+ KM ++G + LS+L +D + L + + PD T
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 191 --------------------EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ 230
+M + PD +Y +N R D++ +L +ME+
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA- 251
Query: 231 PHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSE 290
I + + + K ++ A D+ + E + + + + YN LI+ + G S+
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD 311
Query: 291 VLRLWD--LEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP 345
RL LEK IN + +T +++A K G+ EAEK+ +E DT
Sbjct: 312 ASRLLSNMLEKK-----INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 346 NAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALS 405
N +I G+C + + A+ + + +V K ++ + G+ + E G + +
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE--- 423
Query: 406 VYVEGKGWKPDPKVITSILS---KLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANI 462
+ +G + T+I+ + GD S Q V F + +P + Y +
Sbjct: 424 --MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV--FKQMVSNRVPTDIMTYSILLHGLC 479
Query: 463 RNGK 466
GK
Sbjct: 480 SYGK 483
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 94/213 (44%), Gaps = 4/213 (1%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
KD QTY L+N + + ++ + + FR+M + G+ +T+TY I+ + + G +
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDS 451
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
V +M + + D +Y I ++ + L+ +I + ++ + + L+ Y +
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ-KSEMELNIFIYNTMI 510
Query: 245 HFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKR 304
KA + +A D+ + D + YN +IS S E L+ K
Sbjct: 511 EGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 305 YINRDYITMLEALMKLGEHEEAEKVLKEWELSG 337
+ Y T++ A ++ + + +++KE SG
Sbjct: 568 PNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 134/343 (39%), Gaps = 55/343 (16%)
Query: 117 AESYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMC 174
A S FS++ +D + TY L++ ++ ++KAL F +M + IA + T+N I+
Sbjct: 523 ASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIIN 582
Query: 175 LYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQP 231
K GQ + D L + P +Y ++ + +++ + REM P
Sbjct: 583 GLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSP 642
Query: 232 HIV-------------------------------LDWSTYASAAHFYIKANLIDKASDVL 260
++V LD + Y++ + K ++ A D+
Sbjct: 643 NVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLF 702
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR-------DYITM 313
+ E + I YN +IS + L N L + K+ IN Y T+
Sbjct: 703 FELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWY-------KKMINDRIPCDLGTYTTL 755
Query: 314 LEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 373
++ L+K G A + E G D + ++ G CN G ++NA ILE++ K
Sbjct: 756 IDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNM 815
Query: 374 ATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPD 416
+ + + AGYF G + F L +G PD
Sbjct: 816 TPSVLIYNTLIAGYFREGNLKEAFTLHDEMLD-----RGLVPD 853
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/395 (19%), Positives = 159/395 (40%), Gaps = 40/395 (10%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY +++ + + D+A S M G+ + ++YND++ + + G + V ++M
Sbjct: 471 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 530
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
A+++ P+ +Y I I+ + D E + +M S D+ T+ + + K
Sbjct: 531 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDF-TFNTIINGLCKVGQ 589
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD--- 309
+ +A D LK E + YN ++ + GN L ++ + C+ ++ +
Sbjct: 590 MSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVY---REMCEFGVSPNVVT 646
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
Y +++ K + A K E G D +A+I G+C +++A+ + +L+
Sbjct: 647 YTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELL 706
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGF-----------QCMKAALSVYVEG-------- 410
E G + + + +G+ D E C + ++G
Sbjct: 707 EVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLV 766
Query: 411 -----------KGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL-RTVIPMNRQMYHAFI 458
KG PD +++ L ++G +++ + + R + + +Y+ I
Sbjct: 767 FASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLI 826
Query: 459 KANIRNG--KGVDELLDSMKADGIDEDEETKEILV 491
R G K L D M G+ D+ T +IL+
Sbjct: 827 AGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI 861
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 25/294 (8%)
Query: 136 ALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAK 195
+L+ Y Q D AL+ F K+ E G+ + +TY+ ++ +G EK ++ T+MK
Sbjct: 370 SLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLN 429
Query: 196 NIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDK 255
I P F+ + Y E + E V + TY + K +D+
Sbjct: 430 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG--VANIFTYNIMMSWLCKGGKMDE 487
Query: 256 ASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD------ 309
A +L + + + YN +I + GN D+ + + RD
Sbjct: 488 ACSLLDNMVNQGMVPNVVSYNDMILGHCRKGN-------MDMASSVFSDMLARDLKPNVV 540
Query: 310 -YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIP-NAVIIGYCNNGLVQNAEAILED 367
Y +++ K G+ E+A + + LS N T N +I G C G + A L++
Sbjct: 541 TYSILIDGNFKKGDSEKALDLFDQM-LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKN 599
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT 421
+E+G + ++ + G+ G + +AL+VY E + P V+T
Sbjct: 600 FLEEGFIPSCMTYNSIVDGFIKEGNID-------SALAVYREMCEFGVSPNVVT 646
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 131/328 (39%), Gaps = 19/328 (5%)
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
D E ++ + LLN Y+R + + A+ F M + N ++ + ++
Sbjct: 185 DFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGEL 244
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAH 245
D+ +M + I+ D+F+ + + + +E E RE + + + LD Y+
Sbjct: 245 RDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKER-GVKLDAGAYSIIIQ 303
Query: 246 FYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRY 305
K + ++L++ +ER + +I + GN E LRL + E C +
Sbjct: 304 AVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKE-EMINCGKP 362
Query: 306 INRDYIT-MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII-GYCNNGLVQNAEA 363
+N T +++ G + A + + G + ++ +V+I G CN+G ++ A
Sbjct: 363 MNLVVATSLMKGYCAQGNLDSALNLFNKITEDG-LFPNKVTYSVLIEGCCNSGNIEKASE 421
Query: 364 ILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG------------K 411
+ + G + + + GY A E + A+ V K
Sbjct: 422 LYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCK 481
Query: 412 GWKPDPKVITSILSKLGDEGSVQDVEAF 439
G K D S+L + ++G V +V ++
Sbjct: 482 GGKMDEA--CSLLDNMVNQGMVPNVVSY 507
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 70/374 (18%), Positives = 139/374 (37%), Gaps = 53/374 (14%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T ++ +++ + ++A +FR+ KE G+ L Y+ I+ K ++L EM
Sbjct: 262 TVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEM 321
Query: 193 KAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYASAAHFYIKAN 251
K + P ++ I + A+ ++ E + L+E ++ S Y
Sbjct: 322 KERGWVPSEATFTSVIVACVAQGNMVEALR--LKEEMINCGKPMNLVVATSLMKGYCAQG 379
Query: 252 LIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI 311
+D A ++ K E + + Y+ LI + GN + L+ K +
Sbjct: 380 NLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVN 439
Query: 312 TMLEALMKLGEHEEAEKVLKE-----------------WELSGNSYDT------------ 342
++L +K EEA K+ E W G D
Sbjct: 440 SLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQG 499
Query: 343 RIPNAV-----IIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+PN V I+G+C G + A ++ D++ + +++++ G F G +E+
Sbjct: 500 MVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKAL 559
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV------EAFVAALRTVIPMNR 451
LS+ + + + I + L K+G +D E F+ + T
Sbjct: 560 DLFDQMLSLNIAPTDFTFN--TIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT------ 611
Query: 452 QMYHAFIKANIRNG 465
Y++ + I+ G
Sbjct: 612 --YNSIVDGFIKEG 623
>gi|356528509|ref|XP_003532845.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 580
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 145/373 (38%), Gaps = 71/373 (19%)
Query: 110 RVHGFLSAESYFSNLKDDEKTYQ---TYGALLNCYVRQRQTDKALSHFRKMKEMGIALST 166
++ A YF +K E+ TY LL + + R ++ S F+ + E ++
Sbjct: 223 KIKALAKAIGYFQKMKGMERCKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDI 282
Query: 167 LTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILRE 226
T+N +M Y K G ++ VL MK+ PD ++ + I+SYG + ME + +
Sbjct: 283 YTFNGVMDAYGKNGMIREMEAVLARMKSNQCKPDLITFNLLIDSYGKKQAFGKMEQVFKS 342
Query: 227 M---ESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYA 283
+ + +P + T+ S Y KA L DKA DV KK + + + +I +Y
Sbjct: 343 LLHSKERPSL----PTFNSMILNYGKARLKDKAEDVFKKMTDMGYTLSFVTHESMIYMYG 398
Query: 284 SLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTR 343
S +L+D E K +I ++ L A++ +
Sbjct: 399 FCDCVSRAAQLFD-ELVESKVHIK---VSTLNAMLDV----------------------- 431
Query: 344 IPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAA 403
YC NGL Q A+++ E + +++ ++ Y A + E
Sbjct: 432 --------YCLNGLPQEADSLFERAISIKIHPDSSTFKLLYKAYTKANQKE--------- 474
Query: 404 LSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTV--IPMNRQMYHAFIKAN 461
++ +L + +G + + F+ AL V +P N + +A +N
Sbjct: 475 ---------------LLDKLLKHMDKDGIIPNKRFFLDALGAVASLPANSESANAATDSN 519
Query: 462 IRNGKGVDELLDS 474
N + + DS
Sbjct: 520 TANSESANAATDS 532
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 128/307 (41%), Gaps = 16/307 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY L++ + R+ + D A+ KM GI ++ YN ++ + K G EM
Sbjct: 403 TYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEM 462
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
K + P SY I+ Y + L + EM + I + T+ + +AN
Sbjct: 463 IDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKG-IAPNTYTFTTLISALFRAN- 520
Query: 253 IDKASDVLKKAEERLEQK---DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ +D + +E LEQ + + YN +I + GN + L L + K +
Sbjct: 521 --RMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFEL--LNQMVQKGLVPDT 576
Query: 310 YI--TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILED 367
Y ++ +L G EA+K + + + +A++ GYC G +++A + +
Sbjct: 577 YTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCRE 636
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKL 427
+V++G +AV+ G T F +K + + +PD + TS++
Sbjct: 637 MVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKN-----MHDQRLRPDKVIYTSMIDGY 691
Query: 428 GDEGSVQ 434
GSV+
Sbjct: 692 SKAGSVK 698
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 126/305 (41%), Gaps = 53/305 (17%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L++ R + A F +M E + + +TYN ++ + K G K ++L +M
Sbjct: 508 TFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQM 567
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK--- 249
K + PD ++YR I+S + + + + ++ + H L+ Y++ H Y K
Sbjct: 568 VQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHRE-HFKLNEMCYSALLHGYCKEGR 626
Query: 250 -----------------------ANLID---KASD------VLKKAEERLEQKDGIGYNF 277
A LID K D +LK ++ + D + Y
Sbjct: 627 LRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTS 686
Query: 278 LISLYASLGNKSEVLRLWDLE-KTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELS 336
+I Y+ G+ + +WD+ C I Y T++ L K G ++AE + KE +S
Sbjct: 687 MIDGYSKAGSVKKAFGIWDIMIDEGCTPNI-VTYTTLINELCKAGLMDKAELLWKEMLVS 745
Query: 337 GNSYDTRIPNAVIIGYC-------NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFD 389
++ PN V YC G ++ A + D++ KG S+ ++ G+
Sbjct: 746 NST-----PNHVT--YCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCK 797
Query: 390 AGKTE 394
G+ E
Sbjct: 798 LGRVE 802
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/404 (20%), Positives = 163/404 (40%), Gaps = 52/404 (12%)
Query: 132 QTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
+T G +LN + R+ D L F ++ MGI Y ++ + + + K +++
Sbjct: 194 RTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQR 253
Query: 192 MKAKNIFPDNFSYRICINSYGARSDL-EGMEIILREMESQPHIVLDWSTYAS-------A 243
M++ ++ + Y + I+ + E +EI + Q + TY +
Sbjct: 254 MESSDL--NVVVYNVLIHGLCKNKRVWEAVEI--KNGLIQKGLTASEVTYCTLVLGLCKV 309
Query: 244 AHFYIKANLIDK----------------------------ASDVLKKAEERLEQKDGIGY 275
F + A ++D+ A D++ + ++ Y
Sbjct: 310 QEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVY 369
Query: 276 NFLISLYASLG--NKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEW 333
N LI+ G +++E+L EK C + Y ++++ + G+ + A L +
Sbjct: 370 NALINSLCKDGKFDEAELLFKEMGEKGLCANDVT--YSILIDSFCRRGKLDTAIHFLGKM 427
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKT 393
++G N++I G+C G + A + +++++KG T S+ + +GY + GK
Sbjct: 428 IMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKL 487
Query: 394 ERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDV-EAFVAALRTVIPMNRQ 452
F+ L + GKG P+ T+++S L + D F L + N
Sbjct: 488 HEAFR-----LYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEV 542
Query: 453 MYHAFIKANIRNGKGVD--ELLDSMKADGIDEDEETKEILVCTM 494
Y+ I+ + + G V ELL+ M G+ D T L+ ++
Sbjct: 543 TYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSL 586
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 111/284 (39%), Gaps = 47/284 (16%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMK 193
Y ALL+ Y ++ + AL R+M + G+ + + Y ++ K V +L M
Sbjct: 614 YSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMH 673
Query: 194 AKNIFPDNFSYRICINSY---GARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKA 250
+ + PD Y I+ Y G+ G+ I+ + P+IV TY + + KA
Sbjct: 674 DQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIV----TYTTLINELCKA 729
Query: 251 NLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRD 309
L+DKA + K+ + + Y + A G+ + ++L D+ K ++
Sbjct: 730 GLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVS-- 787
Query: 310 YITMLEALMKLGEHEEAEKVLKE--------------------------------WEL-- 335
Y ++ KLG EEA K+L E W+
Sbjct: 788 YNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTML 847
Query: 336 -SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPN 378
G DT N +I G C G + A + +D++ +G PN
Sbjct: 848 NKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRG--VKPN 889
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+ TY L+ R+ +KA+ M + G+ +T++YN ++ + K G+ E+ +L
Sbjct: 751 HVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLD 809
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEG 219
EM IFPD +Y I R +L+G
Sbjct: 810 EMIDNAIFPDCITYSTIIYQCCRRGNLDG 838
>gi|297847014|ref|XP_002891388.1| hypothetical protein ARALYDRAFT_336905 [Arabidopsis lyrata subsp.
lyrata]
gi|297337230|gb|EFH67647.1| hypothetical protein ARALYDRAFT_336905 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 3/151 (1%)
Query: 53 WVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWM-NRKGICVFAPCDHAVQLDLIGRV 111
W + G++V+ ++ +I++ + S+ALE S+WM +K +F+ D+A +L L+ V
Sbjct: 44 WSEQGDQVKPSYVRGVIKNFHDFNQCSKALEASEWMCEQKFFNIFSE-DYAARLHLVETV 102
Query: 112 HGFLSAESYFSNLKDDEKTYQTYGALLNCYVRQRQT-DKALSHFRKMKEMGIALSTLTYN 170
G AE +F ++ ++ + Y Y LL Y + +T DKA + F KM+++G L +N
Sbjct: 103 LGLEEAEKFFESIPENMRDYSVYDNLLRSYTKSEKTLDKAEATFEKMRDLGFLLKPSPFN 162
Query: 171 DIMCLYSKTGQYEKVPDVLTEMKAKNIFPDN 201
++ LY + + V + EM ++ D+
Sbjct: 163 SMISLYRHLKKKDMVKKLEREMMENDVRFDS 193
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 50/222 (22%)
Query: 189 LTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYI 248
+ E K NIF ++++ R+ + + G+E + ES P + D+S Y + Y
Sbjct: 79 MCEQKFFNIFSEDYAARLHLVE-----TVLGLEEAEKFFESIPENMRDYSVYDNLLRSYT 133
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGY-------NFLISLYASLGNKSEVLRL------- 294
K+ L KAE E+ +G+ N +ISLY L K V +L
Sbjct: 134 KSE------KTLDKAEATFEKMRDLGFLLKPSPFNSMISLYRHLKKKDMVKKLEREMMEN 187
Query: 295 ---WDLEK--------TACK-------RYINR-------DYITMLEALMKLGEHEEAEKV 329
+D K + CK YI + +Y + + L+KL + + AEK+
Sbjct: 188 DVRFDSHKELNVLTILSTCKDSMYSVWNYIKKRGKMTDEEYRSRISYLLKLDDVQGAEKL 247
Query: 330 LKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEK 371
+EW+ G D IP+ +I +C G E +++ + +K
Sbjct: 248 YEEWKPVGPKLDMSIPSLLISRFCEEGNGSKVEELVDSIRKK 289
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 149/377 (39%), Gaps = 57/377 (15%)
Query: 60 VRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPC-DHAVQLDLIGRVHGFLSAE 118
++ GE+ +I ++ KR CVF H V +D R +A
Sbjct: 173 LQFGEVDTVISEMEKR------------------CVFPDVVTHNVMVDARFRAGDVEAAM 214
Query: 119 SYFSNL--KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLY 176
+ ++ K + TY ++L +R + DKA FR M G+A ++N ++ +
Sbjct: 215 ALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGF 274
Query: 177 SKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES---QPHI 233
+ G+ E+ EM+ + + PD S+ I + R +++ LREM P
Sbjct: 275 CRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDG 334
Query: 234 VL-------------------------------DWSTYASAAHFYIKANLIDKASDVLKK 262
V+ D TY + + K + A ++L +
Sbjct: 335 VIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNE 394
Query: 263 AEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGE 322
+ER D + LI Y GN + L+ +D R Y T+++ + + G+
Sbjct: 395 MKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGD 454
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVII-GYCNNGLVQNAEAILEDLVEKGKATTPNSWA 381
+A ++ + S + + +++I +C G V NA A L+++V KG ++
Sbjct: 455 LGKANELWDDMH-SREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYN 513
Query: 382 VVAAGYFDAGKTERGFQ 398
+ GY +G +G Q
Sbjct: 514 SIIKGYCRSGNVSKGQQ 530
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 146/338 (43%), Gaps = 23/338 (6%)
Query: 164 LSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEII 223
++T T N ++ Y KT Q+ +V V++EM+ + +FPD ++ + +++ D+E +
Sbjct: 157 VNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMAL 216
Query: 224 LREMES---QPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLIS 280
+ M S +P +V TY S ++ DKA +V + + D +N LI
Sbjct: 217 IDSMVSKGIKPGLV----TYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIG 272
Query: 281 LYASLGNKSEVLRLWDLEKTACKRYINRDYIT---MLEALMKLGEHEEAEKVLKEWELSG 337
+ G E LR + K R + D ++ ++ + GE + A + L+E G
Sbjct: 273 GFCRAGELEEALRFY---KEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFG 329
Query: 338 NSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
D I VI G+C GL+ A + +++V G ++ + G ER
Sbjct: 330 LMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLC----KERRL 385
Query: 398 QCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAAL--RTVIPMNRQMYH 455
+ L+ E +G PD T+++ +G+++ F + + + P + Y+
Sbjct: 386 SDAEELLNEMKE-RGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRP-DIVTYN 443
Query: 456 AFIKANIRNGK--GVDELLDSMKADGIDEDEETKEILV 491
I R G +EL D M + I + T IL+
Sbjct: 444 TLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILI 481
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 3/167 (1%)
Query: 131 YQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLT 190
+ TY L++ + + Q D A + +M GI + +TYN I+ Y ++G K L
Sbjct: 474 HVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLP 533
Query: 191 EMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTY-ASAAHFYIK 249
+M+ + PD +Y I+ Y + +L+ ME++ ++ D TY + F +
Sbjct: 534 KMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENE-NVQPDAVTYNMIISGFSVH 592
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD 296
N+ +A V KK R + D Y +I+ + GN + +L D
Sbjct: 593 GNM-QEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHD 638
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 152/362 (41%), Gaps = 20/362 (5%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
+ Y L+ RQ ++AL R+M+E+G + + ++ ++ G+ E ++
Sbjct: 181 AFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALV 240
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
E+K + PD Y +CI+ +G +++ E++SQ + D +Y S K
Sbjct: 241 DEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQ-GLKPDDVSYTSMIWVLCK 299
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINR 308
A + +A ++ + E YN +I Y S G +L D L++ C +
Sbjct: 300 AGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSV-V 358
Query: 309 DYITMLEALMKLGEHEEA----EKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAI 364
+ ++L L K + +EA E + K+ E + ++Y N +I C G V+ A I
Sbjct: 359 SFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTY-----NIIIDMLCMAGKVEEAYMI 413
Query: 365 LEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSIL 424
+++ G + ++ A K E ++ + A +G P+ S++
Sbjct: 414 RDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETA-----SQRGCNPNSVTYCSLI 468
Query: 425 SKLGDEGSVQDV-EAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD--ELLDSMKADGID 481
LG +G+V D F L T N +Y + I+ +G+ D ++ M G
Sbjct: 469 DGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQ 528
Query: 482 ED 483
D
Sbjct: 529 PD 530
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 152/399 (38%), Gaps = 71/399 (17%)
Query: 28 NKTTLYSIISPLGNPGTRIEPE--LDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVS 85
N T S+I LG G + +N + G+ +IR+ R ++
Sbjct: 460 NSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIF 519
Query: 86 DWMNRKGI------------CVFAPCD----HAVQLDLIGRVHGFLSAESYFSNLKDDEK 129
MNR+G CVF D A+ D+ G +GFL
Sbjct: 520 KEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKG--YGFLP------------- 564
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
++Y L++ + Q + S F MK+ G AL YN ++ + K+G+ +K +VL
Sbjct: 565 DVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVL 624
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
EMK K + P +Y I+ L+ ++ E +S+ I L+ Y+S + K
Sbjct: 625 EEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSK-GIELNVIVYSSLIDGFGK 683
Query: 250 ANLIDKA----------------------SDVLKKAEERLE-------------QKDGIG 274
ID+A D L KAEE E +
Sbjct: 684 VGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYT 743
Query: 275 YNFLISLYASLGNKSEVLRLW-DLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEW 333
Y+ LI+ + ++ W +++K + Y TM+ L K+G +A + + +
Sbjct: 744 YSILINGLCRVQKYNKAFVFWQEMQKQGLVPNV-VTYTTMIAGLAKVGNITDACSLFERF 802
Query: 334 ELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+ +G + D NA+I G + A + E+ KG
Sbjct: 803 KANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKG 841
>gi|15219388|ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
DEFECTIVE 2217; Flags: Precursor
gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis thaliana]
gi|332198129|gb|AEE36250.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 836
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 140/337 (41%), Gaps = 16/337 (4%)
Query: 43 GTRIEPELDNWVKNGNKVRVGELQRIIRDLRKRKRFSQALEVSDWMNRKGICVFAPCD-- 100
G +E +LD N V + + +I++++ AL + W ++ + P D
Sbjct: 156 GPELETQLDKLQFVPNMVHITQSLKIVKEV------DAALSLFRWAKKQPW--YLPSDEC 207
Query: 101 HAVQLDLIGRVHGFLSAESYFSNLKDDEKT-----YQTYGALLNCYVRQRQTDKALSHFR 155
+ V D + + F+ +S F + D + + Y ++ + + + A F+
Sbjct: 208 YVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFK 267
Query: 156 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARS 215
K +E G + T TYN++M L+ G K ++ M+ + D +Y + I S
Sbjct: 268 KAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSG 327
Query: 216 DLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGY 275
L+ + ++M+ + + +S ++S KA +D + V + + + +
Sbjct: 328 RLDAAFKLFQQMKER-KLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMF 386
Query: 276 NFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWEL 335
LI YA G LRLWD K + R Y ++E+ K G+ E A V K+ E
Sbjct: 387 VSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEK 446
Query: 336 SGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKG 372
+G + ++ + +G V +A I + G
Sbjct: 447 AGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAG 483
>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 149/357 (41%), Gaps = 32/357 (8%)
Query: 68 IIRDLRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFLSAESYFSNLK-- 125
II L K R +A + M +GI F +D + +V AE F +
Sbjct: 51 IINSLFKSGRVMEAFNLQSQMVVRGIS-FDIVTCTTVMDGLFKVGKTKEAEEVFETILKL 109
Query: 126 DDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKV 185
+ TY ALL+ Y + + + A +KM++ + + +T++ I+ Y+K G K
Sbjct: 110 NLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKA 169
Query: 186 PDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMES----QPHIVLDWSTYA 241
DVL EM +N+ P+ Y I I+ Y + + + +EM+S + +++ D
Sbjct: 170 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDI---- 225
Query: 242 SAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTA 301
+ + +D+A ++ + D + Y LI Y GN+ L + K
Sbjct: 226 -LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEK 284
Query: 302 CKRYINRDYITMLEALMKLGEH--------------------EEAEKVLKEWELSGNSYD 341
R+ Y +++ L++LG++ E+A +L E + G +
Sbjct: 285 NIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPN 344
Query: 342 TRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQ 398
N +I G C G V+ AE+ L++++ TP + + Y + K ++ Q
Sbjct: 345 AVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQ 401
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 164/379 (43%), Gaps = 33/379 (8%)
Query: 128 EKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPD 187
+ + +Y ++N + + +A + +M GI+ +T +M K G+ ++ +
Sbjct: 42 DPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEE 101
Query: 188 VLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFY 247
V + N+ P+ +Y ++ Y +E E++L++ME + H+ + T++S + Y
Sbjct: 102 VFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKE-HVPPNVITFSSIINGY 160
Query: 248 IKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYIN 307
K ++ KA DVL++ +R + I Y LI Y G + D+ CK +
Sbjct: 161 AKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQ-------DVADDFCKEMKS 213
Query: 308 RD-------YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
R + +L L ++G +EA ++ + G D ++I GY G
Sbjct: 214 RRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLA 273
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKA-------------ALSVY 407
A +I++++ EK ++ + G GK + + C + AL +
Sbjct: 274 ALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDIL 333
Query: 408 VEGKGWKPDPKVITS--ILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAF-IKANIRN 464
E K + P +T ++ L G+V+ E+ + + + + + H F +KA R+
Sbjct: 334 NEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRS 393
Query: 465 GKG--VDELLDSMKADGID 481
K + ++ + + A G++
Sbjct: 394 EKADKILQIHEKLVASGLE 412
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 148/390 (37%), Gaps = 76/390 (19%)
Query: 134 YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQY----------- 182
Y +L++ Y ++ ALS ++MKE I + YN ++ + G+Y
Sbjct: 258 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIE 317
Query: 183 ---------EKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHI 233
E D+L EMK+ I P+ +Y I I +E E L EM +
Sbjct: 318 LGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEM-----L 372
Query: 234 VLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLR 293
V+++ F +KA + +D + + E+L + +SL
Sbjct: 373 VMEFVPTPITHKFLVKAYSRSEKADKILQIHEKL-----VASGLELSLTV---------- 417
Query: 294 LWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYC 353
Y T++ +LG +A+ VL E G S D NA+I GYC
Sbjct: 418 ----------------YNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYC 461
Query: 354 NNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGW 413
V+ A + G A ++ + G +AG E + + +S E +G
Sbjct: 462 TGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNE-RGL 520
Query: 414 KPDPKVITSILSKLGDEGSVQD---------VEAFVAALRTVIPMNRQMYHAFIKANIRN 464
P+ ++S G G+ + + FV L+T Y+ I ++
Sbjct: 521 VPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKT--------YNVLISDYAKS 572
Query: 465 GKGVD--ELLDSMKADGIDEDEETKEILVC 492
GK ++ ELL+ + G + T +IL C
Sbjct: 573 GKMIEARELLNDLLTKGRIPNSFTYDILTC 602
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 8/218 (3%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T+ L+ Y R + DK L K+ G+ LS YN ++ ++ + G K VL EM
Sbjct: 382 THKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEM 441
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYIK 249
+ I D +Y I Y S +E +M P+I + ++ +
Sbjct: 442 VKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLM 501
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
++++ ++ + ER + Y+ L+S Y +GN+ + + L T +
Sbjct: 502 EEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKT 561
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNA 347
Y ++ K G+ EA ++L + G RIPN+
Sbjct: 562 YNVLISDYAKSGKMIEARELLNDLLTKG-----RIPNS 594
>gi|242053311|ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
gi|241927776|gb|EES00921.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
Length = 642
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 8/242 (3%)
Query: 133 TYGALLN-CYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTE 191
TY LL+ C ++ KA+ MK G+ + + Y ++ + + E+ +
Sbjct: 186 TYSTLLSGCMKLKQGYTKAMELINDMKSRGLQMDIVIYGTLLAICASHNYCEEAEVYFQK 245
Query: 192 MKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQ---PHIVLDWSTYASAAHFYI 248
MK + P+ F Y +N+Y SD E E++++++ S P+ V+ + Y
Sbjct: 246 MKDEGHCPNLFHYSSLLNAYSENSDYEKAELLMKDLRSSGLTPNKVI----LTTLLKVYS 301
Query: 249 KANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
K L +KA ++L + E +D + Y LI G E L++ K +
Sbjct: 302 KGGLFEKAKELLTELEASGFAQDEMPYCILIDGLVKGGKIQEAKILFNEMKEKGVKSDGY 361
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
+ M+ AL + G HEE++++ KE+E SYD + N + YC+ +++ +L+ +
Sbjct: 362 AFSIMISALHRGGHHEESKQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRMLKKM 421
Query: 369 VE 370
E
Sbjct: 422 DE 423
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 125/314 (39%), Gaps = 61/314 (19%)
Query: 72 LRKRKRFSQALEVSDWMNRKGICVFAPCDHAVQLDLIGRVHGFL-----------SAESY 120
++ ++ +++A+E+ + M +G+ Q+D++ ++G L AE Y
Sbjct: 195 MKLKQGYTKAMELINDMKSRGL----------QMDIV--IYGTLLAICASHNYCEEAEVY 242
Query: 121 FSNLKDDEKTYQT--YGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSK 178
F +KD+ Y +LLN Y +KA + ++ G+ + + ++ +YSK
Sbjct: 243 FQKMKDEGHCPNLFHYSSLLNAYSENSDYEKAELLMKDLRSSGLTPNKVILTTLLKVYSK 302
Query: 179 TGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWS 238
G +EK ++LTE++A D Y I I+
Sbjct: 303 GGLFEKAKELLTELEASGFAQDEMPYCILIDG---------------------------- 334
Query: 239 TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLE 298
+K I +A + + +E+ + DG ++ +IS G+ E +L
Sbjct: 335 --------LVKGGKIQEAKILFNEMKEKGVKSDGYAFSIMISALHRGGHHEESKQLAKEF 386
Query: 299 KTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLV 358
++ Y T L + E ++LK+ + S D N +I +CN+ +
Sbjct: 387 ESENASYDLVMLNTSLRTYCSTNDMESVMRMLKKMDELNISPDNITFNTLIRYFCNSKVY 446
Query: 359 QNAEAILEDLVEKG 372
A +ED+ KG
Sbjct: 447 HLAYKTVEDMHTKG 460
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 122/265 (46%), Gaps = 16/265 (6%)
Query: 145 RQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSY 204
R +AL + +K+ + + N ++ K G+ + + EM + + PD F+Y
Sbjct: 128 RDPARALQVYGAIKDQTMKVHVSVCNSVLGCLVKNGRLDSSFKLYDEMIREGLSPDPFTY 187
Query: 205 RICINSYGARSDLEG----MEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVL 260
++ G +G ME+I +M+S+ + +D Y + N ++A
Sbjct: 188 STLLS--GCMKLKQGYTKAMELI-NDMKSR-GLQMDIVIYGTLLAICASHNYCEEAEVYF 243
Query: 261 KKAEERLEQKDGIGYNFLISLYASLGN--KSEVLRLWDLEKTACKRYINRDYI-TMLEAL 317
+K ++ + Y+ L++ Y+ + K+E+L + DL + N+ + T+L+
Sbjct: 244 QKMKDEGHCPNLFHYSSLLNAYSENSDYEKAELL-MKDLRSSGLTP--NKVILTTLLKVY 300
Query: 318 MKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII-GYCNNGLVQNAEAILEDLVEKGKATT 376
K G E+A+++L E E SG + D +P ++I G G +Q A+ + ++ EKG +
Sbjct: 301 SKGGLFEKAKELLTELEASGFAQD-EMPYCILIDGLVKGGKIQEAKILFNEMKEKGVKSD 359
Query: 377 PNSWAVVAAGYFDAGKTERGFQCMK 401
+++++ + G E Q K
Sbjct: 360 GYAFSIMISALHRGGHHEESKQLAK 384
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 158/367 (43%), Gaps = 19/367 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TYG +LN + QT A+ RKM+E I L + Y+ I+ K G + ++ EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREM---ESQPHIVLDWSTYASAAHFYIK 249
+ K I + +Y I I + + +LR+M + P++V T++ ++K
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV----TFSVLIDSFVK 345
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKT-ACKRYINR 308
+ +A ++ K+ R D I Y LI + + + ++ DL + C I R
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI-R 404
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDL 368
+ ++ K ++ ++ ++ L G DT N +I G+C G + A+ + +++
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 369 VEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLG 428
V + ++ ++ G D G++E+ + + +E + D + I+ +
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK-----IEKSKMELDIGIYNIIIHGMC 519
Query: 429 DEGSVQDV-EAFVA-ALRTVIPMNRQMYHAFIKANIRNG--KGVDELLDSMKADGIDEDE 484
+ V D + F + L+ V P + Y+ I + G + L M+ DG D
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKP-GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 485 ETKEILV 491
T IL+
Sbjct: 579 WTYNILI 585
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 135/316 (42%), Gaps = 48/316 (15%)
Query: 124 LKDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDI---MCLYSKTG 180
LK T ++NC+ R R+ A S K+ ++G +T+T++ + +CL +
Sbjct: 116 LKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS 175
Query: 181 QYEKVPDVLTEMKAKNIFPDNFSYRICINSYG-ARSDLEGMEIILREME--SQPHIVLDW 237
+ ++ D + EM K PD + +N + + E M +I + +E QP+ V
Sbjct: 176 EALELVDRMVEMGHK---PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV--- 229
Query: 238 STYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL--- 294
TY + K+ A ++L+K EER + D + Y+ +I G+ L
Sbjct: 230 -TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 295 -------------------------WD----LEKTACKRYINRDYIT---MLEALMKLGE 322
WD L + KR IN + +T ++++ +K G+
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 323 HEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAV 382
EAE++ KE G + DT ++I G+C + A +++ +V KG ++ +
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 383 VAAGYFDAGKTERGFQ 398
+ GY A + + G +
Sbjct: 409 LINGYCKANRIDDGLE 424
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 151/368 (41%), Gaps = 21/368 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
T L+N + +A+ KM E G + +TY ++ + K+GQ ++L +M
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 193 KAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANL 252
+ +NI D Y I I+ L+ + EME + I + TY + A
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK-GITTNIITYNILIGGFCNAGR 313
Query: 253 IDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYIT 312
D + +L+ +R + + ++ LI + G E +L K R I D IT
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA---EELHKEMIHRGIAPDTIT 370
Query: 313 ---MLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLV 369
+++ K ++A +++ G + R N +I GYC + + + +
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 370 EKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKL 427
+G ++ + G+ + GK + A ++ E K P ++T +L L
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGK-------LNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Query: 428 GDEG-SVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD---ELLDSMKADGIDED 483
D G S + +E F ++ + ++ +Y+ I + N VD +L S+ G+
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG-MCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 484 EETKEILV 491
+T I++
Sbjct: 543 VKTYNIMI 550
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 117/277 (42%), Gaps = 45/277 (16%)
Query: 125 KDDEKTYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEK 184
K + +T+ L+N Y + + D L FRKM G+ T+TYN ++ + + G+
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456
Query: 185 VPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAA 244
++ EM ++ + P+ +Y+I ++ + E
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE-------------------------- 490
Query: 245 HFYIKANLIDKASDVLKKAEE-RLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACK 303
KA ++ +K E+ ++E GI YN +I + N S+V WDL +
Sbjct: 491 ----------KALEIFEKIEKSKMELDIGI-YNIIIH---GMCNASKVDDAWDLFCSLPL 536
Query: 304 RYIN---RDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQN 360
+ + + Y M+ L K G EAE + ++ E G++ D N +I + +G
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596
Query: 361 AEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGF 397
+ ++E+L G + ++ +V D G+ ++ F
Sbjct: 597 SVKLIEELKRCGFSVDASTIKMVIDMLSD-GRLKKSF 632
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 157/358 (43%), Gaps = 27/358 (7%)
Query: 146 QTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYR 205
+ D A+ FR M + + ++ + +KT QY+ V + +M+ K I + ++
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 206 ICINSYGARSDL----EGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLK 261
I IN + L M I++ + +P+ + T+++ + + +A +++
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIK-LGYEPNTI----TFSTLINGLCLEGRVSEALELVD 182
Query: 262 KAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWD-LEKTACKRYINRDYITMLEALMKL 320
+ E + D I N L++ G ++E + L D + + C+ Y +L + K
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN-AVTYGPVLNVMCKS 241
Query: 321 GEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSW 380
G+ A ++L++ E D + +I G C +G + NA + ++ KG T ++
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 381 AVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVIT--SILSKLGDEGSVQDVEA 438
++ G+ +AG+ + G + ++ + K +P V+T ++ EG +++ E
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIK-------RKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 439 FVAAL--RTVIP---MNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILV 491
+ R + P + F K N + ++++D M + G D + T IL+
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKEN--HLDKANQMVDLMVSKGCDPNIRTFNILI 410
>gi|302781402|ref|XP_002972475.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
gi|300159942|gb|EFJ26561.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
Length = 406
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 131/298 (43%), Gaps = 16/298 (5%)
Query: 133 TYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEM 192
TY AL+N + + T+ L +M G+ + +N +M +S++G++E+V + M
Sbjct: 119 TYAALINGFCKCMDTEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALFERM 178
Query: 193 KAKNIFPDNFSYRICINSYGARSDL-EGMEIILR--EMESQPHIVLDWSTYASAAHFYIK 249
PD SYR+ + ++ + E + R + E+ PH+ Y + + K
Sbjct: 179 VEHECRPDPKSYRVLVEAFAVSGRIDEAFGFVQRYADSENAPHL----GAYNTLMNRLGK 234
Query: 250 ANLIDKASDVLKKAEERLEQK-DGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINR 308
AN A ++ K ++R K D + YN LI L +G E + + + I
Sbjct: 235 ANKAHAALEIFYKIKDRPNYKPDLVTYNVLIDLLGKVGKIDECWSCYQKMRLHFQPDIF- 293
Query: 309 DYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVII-GYCNNGLVQNAEAILED 367
Y T+L L + G + VL + G D RI A+++ GY G + A A LE+
Sbjct: 294 SYNTLLGRLGRAGRVDLFASVLDDMSRDGVQQD-RITYAILVEGYARAGNLDVALAYLEE 352
Query: 368 LVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 425
+ G + TP++ V+ AG+ F +A + G P K++T L+
Sbjct: 353 MKSSGFSPTPSALEVLVNSLLKAGR----FGAAEAVVQEMAAING-GPGKKIVTGTLA 405
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 154/379 (40%), Gaps = 28/379 (7%)
Query: 130 TYQTYGALLNCYVRQRQTDKALSHFRKMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVL 189
TY TY LL YV + AL F KM+ I + Y+ IM + VP +
Sbjct: 12 TYVTYRILLRIYVDASMVEDALETFHKMEFSEIKPTLDDYHYIMFKLIRLKCPRVVPMIF 71
Query: 190 TEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIK 249
M+ + P+ +Y I+S + + E R + + D TYA+ + + K
Sbjct: 72 ESMRKNLVRPNTQTYNFLISSLCSLGKMA--EARWRFSYMKKYCDPDEFTYAALINGFCK 129
Query: 250 ANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRD 309
+ ++L++ R + + +N ++ ++ G +V+ L++ R +
Sbjct: 130 CMDTEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALFERMVEHECRPDPKS 189
Query: 310 YITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVI--IGYCNNGLVQNAEAILED 367
Y ++EA G +EA ++ + S N+ N ++ +G N A A LE
Sbjct: 190 YRVLVEAFAVSGRIDEAFGFVQRYADSENAPHLGAYNTLMNRLGKAN-----KAHAALEI 244
Query: 368 L--VEKGKATTPN--SWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSI 423
++ P+ ++ V+ GK + + C + + ++ ++PD ++
Sbjct: 245 FYKIKDRPNYKPDLVTYNVLIDLLGKVGKIDECWSCYQ-KMRLH-----FQPDIFSYNTL 298
Query: 424 LSKLGDEGSVQDVEAFVAAL----RTVIPMNRQMYHAFIKANIRNGKGVDEL--LDSMKA 477
L +LG G V+ F + L R + +R Y ++ R G L L+ MK+
Sbjct: 299 LGRLGRAGR---VDLFASVLDDMSRDGVQQDRITYAILVEGYARAGNLDVALAYLEEMKS 355
Query: 478 DGIDEDEETKEILVCTMEK 496
G E+LV ++ K
Sbjct: 356 SGFSPTPSALEVLVNSLLK 374
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,723,759,631
Number of Sequences: 23463169
Number of extensions: 321744350
Number of successful extensions: 942239
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3828
Number of HSP's successfully gapped in prelim test: 3458
Number of HSP's that attempted gapping in prelim test: 877058
Number of HSP's gapped (non-prelim): 34189
length of query: 496
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 349
effective length of database: 8,910,109,524
effective search space: 3109628223876
effective search space used: 3109628223876
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)