Query 010995
Match_columns 496
No_of_seqs 315 out of 2014
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 18:37:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010995.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010995hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1b37_A Protein (polyamine oxid 100.0 4.7E-51 1.6E-55 417.3 43.5 443 5-449 3-466 (472)
2 1s3e_A Amine oxidase [flavin-c 100.0 1.1E-47 3.7E-52 397.2 36.9 437 5-466 3-480 (520)
3 2vvm_A Monoamine oxidase N; FA 100.0 2.5E-46 8.6E-51 385.0 32.9 412 7-446 40-490 (495)
4 1rsg_A FMS1 protein; FAD bindi 100.0 3.6E-46 1.2E-50 385.1 32.3 425 5-446 7-512 (516)
5 2z3y_A Lysine-specific histone 100.0 3.8E-45 1.3E-49 386.3 37.8 417 5-444 106-661 (662)
6 2xag_A Lysine-specific histone 100.0 7.7E-45 2.6E-49 387.9 38.9 420 5-447 277-835 (852)
7 2yg5_A Putrescine oxidase; oxi 100.0 1.1E-45 3.9E-50 375.9 28.8 410 5-442 4-452 (453)
8 4gut_A Lysine-specific histone 100.0 7E-44 2.4E-48 378.5 39.1 412 6-439 336-775 (776)
9 2iid_A L-amino-acid oxidase; f 100.0 3E-43 1E-47 362.4 31.2 416 5-444 32-487 (498)
10 2jae_A L-amino acid oxidase; o 100.0 1.2E-42 4E-47 357.1 34.1 412 4-444 9-488 (489)
11 3k7m_X 6-hydroxy-L-nicotine ox 100.0 2.9E-42 1E-46 348.6 33.5 390 6-440 1-425 (431)
12 3i6d_A Protoporphyrinogen oxid 100.0 1E-40 3.4E-45 341.2 28.1 405 1-441 1-468 (470)
13 2ivd_A PPO, PPOX, protoporphyr 100.0 1.5E-39 5.1E-44 333.1 30.9 408 1-443 11-475 (478)
14 3lov_A Protoporphyrinogen oxid 100.0 6.2E-39 2.1E-43 328.2 28.1 405 5-446 3-470 (475)
15 1sez_A Protoporphyrinogen oxid 100.0 1.4E-38 4.9E-43 328.0 26.6 412 6-444 13-496 (504)
16 3ayj_A Pro-enzyme of L-phenyla 100.0 2.1E-38 7.1E-43 329.2 24.5 424 6-446 56-684 (721)
17 3nks_A Protoporphyrinogen oxid 100.0 4.3E-37 1.5E-41 314.8 20.4 411 6-440 2-473 (477)
18 4gde_A UDP-galactopyranose mut 100.0 1.9E-36 6.4E-41 313.0 25.1 408 1-439 4-477 (513)
19 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 1.2E-36 4E-41 297.7 22.3 325 6-440 1-341 (342)
20 3ka7_A Oxidoreductase; structu 100.0 9.7E-36 3.3E-40 300.2 29.0 394 7-438 1-424 (425)
21 4dgk_A Phytoene dehydrogenase; 100.0 1E-34 3.5E-39 299.0 28.7 423 6-446 1-496 (501)
22 3nrn_A Uncharacterized protein 100.0 4E-33 1.4E-37 280.6 25.9 382 7-437 1-403 (421)
23 4dsg_A UDP-galactopyranose mut 100.0 3.5E-32 1.2E-36 277.2 29.6 407 1-438 4-452 (484)
24 2b9w_A Putative aminooxidase; 100.0 1.4E-31 4.9E-36 269.6 25.0 387 1-438 1-423 (424)
25 1yvv_A Amine oxidase, flavin-c 100.0 2.9E-30 9.9E-35 251.8 26.0 327 6-445 2-331 (336)
26 1v0j_A UDP-galactopyranose mut 99.9 5.8E-26 2E-30 225.8 10.7 345 5-442 6-388 (399)
27 2bi7_A UDP-galactopyranose mut 99.9 3.9E-22 1.3E-26 197.0 21.1 339 6-445 3-374 (384)
28 1i8t_A UDP-galactopyranose mut 99.9 2.6E-21 8.9E-26 190.0 19.5 336 6-439 1-365 (367)
29 3hdq_A UDP-galactopyranose mut 99.9 9.8E-21 3.4E-25 185.7 20.0 338 5-440 28-390 (397)
30 3kkj_A Amine oxidase, flavin-c 99.9 1.4E-19 4.6E-24 171.3 25.8 59 6-65 2-60 (336)
31 2bcg_G Secretory pathway GDP d 99.8 1.4E-19 4.7E-24 183.0 25.2 229 5-253 10-299 (453)
32 2e1m_A L-glutamate oxidase; L- 99.8 1.6E-18 5.6E-23 168.6 17.4 79 4-87 42-131 (376)
33 3p1w_A Rabgdi protein; GDI RAB 99.8 1.4E-18 4.7E-23 173.7 15.1 226 5-252 19-312 (475)
34 2e1m_C L-glutamate oxidase; L- 99.8 1.7E-19 5.6E-24 157.5 7.4 119 327-447 37-158 (181)
35 1d5t_A Guanine nucleotide diss 99.8 2.4E-18 8.4E-23 172.7 16.7 229 4-254 4-290 (433)
36 3nyc_A D-arginine dehydrogenas 99.5 1.8E-13 6.2E-18 135.0 19.3 57 191-254 153-209 (381)
37 3oz2_A Digeranylgeranylglycero 99.5 1.4E-12 4.9E-17 129.1 19.2 39 5-44 3-41 (397)
38 3ihg_A RDME; flavoenzyme, anth 99.5 1E-12 3.5E-17 135.7 17.4 57 192-254 120-183 (535)
39 3dje_A Fructosyl amine: oxygen 99.4 1.1E-12 3.7E-17 132.1 15.3 59 191-255 160-222 (438)
40 1vg0_A RAB proteins geranylger 99.4 5.2E-12 1.8E-16 129.9 18.6 90 183-294 369-461 (650)
41 3v76_A Flavoprotein; structura 99.4 4.1E-13 1.4E-17 133.4 9.8 60 188-254 128-187 (417)
42 2qa1_A PGAE, polyketide oxygen 99.4 4.2E-11 1.4E-15 122.1 24.9 155 4-255 9-166 (500)
43 3dme_A Conserved exported prot 99.4 3.5E-12 1.2E-16 125.1 15.7 58 191-254 149-209 (369)
44 2qa2_A CABE, polyketide oxygen 99.4 5.7E-11 1.9E-15 121.1 25.1 154 4-255 10-167 (499)
45 3nix_A Flavoprotein/dehydrogen 99.4 1.3E-11 4.4E-16 123.6 20.0 57 192-254 106-166 (421)
46 2vou_A 2,6-dihydroxypyridine h 99.4 8.8E-12 3E-16 123.7 17.0 153 1-255 1-154 (397)
47 3rp8_A Flavoprotein monooxygen 99.4 9.8E-12 3.3E-16 123.8 16.0 158 4-254 21-181 (407)
48 3fmw_A Oxygenase; mithramycin, 99.4 2.2E-11 7.4E-16 126.0 18.9 157 5-254 48-207 (570)
49 4hb9_A Similarities with proba 99.3 2E-11 6.7E-16 121.6 17.4 46 211-256 122-168 (412)
50 3ps9_A TRNA 5-methylaminomethy 99.3 3.4E-11 1.2E-15 127.7 18.6 58 191-254 416-473 (676)
51 3cgv_A Geranylgeranyl reductas 99.3 7E-11 2.4E-15 117.1 19.4 57 192-254 102-162 (397)
52 3i3l_A Alkylhalidase CMLS; fla 99.3 1.4E-10 4.7E-15 120.2 22.3 61 5-86 22-82 (591)
53 1y56_B Sarcosine oxidase; dehy 99.3 7.4E-12 2.5E-16 123.6 11.3 57 191-254 148-205 (382)
54 2xdo_A TETX2 protein; tetracyc 99.3 3.7E-11 1.3E-15 119.2 16.1 164 1-257 21-185 (398)
55 3pvc_A TRNA 5-methylaminomethy 99.3 4.1E-11 1.4E-15 127.2 16.5 58 191-254 411-469 (689)
56 2x3n_A Probable FAD-dependent 99.3 1.6E-11 5.4E-16 122.0 11.8 59 191-255 106-167 (399)
57 2i0z_A NAD(FAD)-utilizing dehy 99.3 1.3E-11 4.5E-16 124.3 11.2 59 190-254 132-191 (447)
58 2uzz_A N-methyl-L-tryptophan o 99.3 2.3E-11 7.9E-16 119.5 12.7 57 191-254 148-204 (372)
59 3e1t_A Halogenase; flavoprotei 99.3 7.7E-11 2.6E-15 120.8 16.8 58 192-255 111-173 (512)
60 2gf3_A MSOX, monomeric sarcosi 99.2 9E-11 3.1E-15 116.0 14.4 56 192-254 150-205 (389)
61 2oln_A NIKD protein; flavoprot 99.2 2E-10 7E-15 113.8 16.6 56 191-253 152-207 (397)
62 2gag_B Heterotetrameric sarcos 99.2 2.1E-11 7.1E-16 121.3 8.8 57 191-254 173-230 (405)
63 2gqf_A Hypothetical protein HI 99.2 2E-11 6.9E-16 120.8 8.4 58 190-254 107-168 (401)
64 1ryi_A Glycine oxidase; flavop 99.2 1.7E-10 5.8E-15 113.7 14.7 55 192-253 164-218 (382)
65 3da1_A Glycerol-3-phosphate de 99.2 6.2E-11 2.1E-15 122.5 12.0 58 191-254 169-232 (561)
66 3alj_A 2-methyl-3-hydroxypyrid 99.2 1.8E-10 6E-15 113.6 13.4 150 5-255 10-161 (379)
67 1pj5_A N,N-dimethylglycine oxi 99.2 1.1E-10 3.8E-15 126.6 12.1 57 191-254 150-207 (830)
68 3nlc_A Uncharacterized protein 99.1 1.8E-10 6.3E-15 117.6 11.8 58 191-254 219-277 (549)
69 2rgh_A Alpha-glycerophosphate 99.1 4.7E-10 1.6E-14 116.2 14.9 57 192-254 188-250 (571)
70 2e1m_B L-glutamate oxidase; L- 99.1 6.4E-12 2.2E-16 101.4 0.7 105 239-362 4-109 (130)
71 2gmh_A Electron transfer flavo 99.1 2E-09 7E-14 111.7 19.7 39 6-45 35-79 (584)
72 3gwf_A Cyclohexanone monooxyge 99.1 1E-10 3.5E-15 120.1 9.6 48 6-54 8-56 (540)
73 3c96_A Flavin-containing monoo 99.1 2.4E-10 8.2E-15 113.8 11.6 62 5-86 3-65 (410)
74 4ap3_A Steroid monooxygenase; 99.1 9.4E-11 3.2E-15 120.7 8.2 41 6-47 21-61 (549)
75 4at0_A 3-ketosteroid-delta4-5a 99.1 9.5E-10 3.2E-14 112.6 15.5 40 5-45 40-79 (510)
76 1y0p_A Fumarate reductase flav 99.1 1.3E-09 4.4E-14 113.2 16.5 40 5-45 125-164 (571)
77 1w4x_A Phenylacetone monooxyge 99.1 1.4E-10 4.9E-15 119.5 9.2 41 5-46 15-55 (542)
78 2r0c_A REBC; flavin adenine di 99.1 2.7E-10 9.2E-15 117.7 11.2 67 1-87 21-87 (549)
79 1qo8_A Flavocytochrome C3 fuma 99.1 1.2E-09 3.9E-14 113.4 15.3 40 5-45 120-159 (566)
80 3axb_A Putative oxidoreductase 99.1 1.6E-10 5.6E-15 116.5 7.6 57 191-254 180-254 (448)
81 1rp0_A ARA6, thiazole biosynth 99.1 3.1E-10 1.1E-14 106.9 8.6 39 5-44 38-77 (284)
82 2gv8_A Monooxygenase; FMO, FAD 99.0 5E-10 1.7E-14 112.8 10.5 45 1-46 1-47 (447)
83 1k0i_A P-hydroxybenzoate hydro 99.0 3.9E-10 1.3E-14 111.7 9.4 58 193-256 104-165 (394)
84 2zbw_A Thioredoxin reductase; 99.0 4.3E-10 1.5E-14 108.7 9.1 43 211-253 78-120 (335)
85 4a9w_A Monooxygenase; baeyer-v 99.0 2.9E-10 1E-14 110.7 8.0 43 211-254 89-132 (357)
86 3uox_A Otemo; baeyer-villiger 99.0 1.4E-10 4.9E-15 119.2 5.5 41 5-46 8-48 (545)
87 3o0h_A Glutathione reductase; 99.0 3.1E-09 1E-13 108.1 15.3 55 193-253 233-287 (484)
88 3lzw_A Ferredoxin--NADP reduct 99.0 1.9E-10 6.5E-15 110.9 6.0 40 5-45 6-45 (332)
89 3f8d_A Thioredoxin reductase ( 99.0 1.3E-09 4.4E-14 104.5 11.0 42 211-253 83-124 (323)
90 2bry_A NEDD9 interacting prote 99.0 1.3E-09 4.6E-14 110.9 11.3 39 5-44 91-129 (497)
91 3atr_A Conserved archaeal prot 99.0 1.3E-09 4.6E-14 109.9 10.9 58 193-256 101-164 (453)
92 3ab1_A Ferredoxin--NADP reduct 99.0 9.8E-10 3.4E-14 107.3 9.2 43 211-253 87-130 (360)
93 2qcu_A Aerobic glycerol-3-phos 99.0 4.9E-09 1.7E-13 107.0 14.0 58 191-254 148-210 (501)
94 1pn0_A Phenol 2-monooxygenase; 99.0 2.8E-08 9.5E-13 104.7 19.8 62 6-87 8-74 (665)
95 1d4d_A Flavocytochrome C fumar 98.9 2.1E-08 7.2E-13 103.9 17.1 39 6-45 126-164 (572)
96 2aqj_A Tryptophan halogenase, 98.9 1.4E-08 4.7E-13 104.8 15.7 57 192-255 165-223 (538)
97 3jsk_A Cypbp37 protein; octame 98.9 3.6E-09 1.2E-13 100.8 9.2 38 6-44 79-118 (344)
98 3itj_A Thioredoxin reductase 1 98.9 3.2E-09 1.1E-13 102.5 8.6 41 211-252 97-140 (338)
99 2e4g_A Tryptophan halogenase; 98.9 1.8E-08 6.1E-13 104.1 14.5 57 192-255 194-253 (550)
100 2dkh_A 3-hydroxybenzoate hydro 98.9 2.9E-09 1E-13 111.9 8.6 63 5-87 31-94 (639)
101 2weu_A Tryptophan 5-halogenase 98.9 2.4E-08 8.3E-13 102.3 15.0 57 192-255 173-231 (511)
102 3lxd_A FAD-dependent pyridine 98.9 5.6E-09 1.9E-13 104.0 10.0 55 192-252 194-249 (415)
103 2bs2_A Quinol-fumarate reducta 98.9 2.7E-08 9.3E-13 104.1 15.2 57 192-254 158-220 (660)
104 2zxi_A TRNA uridine 5-carboxym 98.8 1.2E-08 4.2E-13 104.6 11.9 56 192-253 123-179 (637)
105 4dna_A Probable glutathione re 98.8 2.1E-08 7.1E-13 101.4 13.6 54 193-253 212-267 (463)
106 4fk1_A Putative thioredoxin re 98.8 1.9E-08 6.5E-13 95.7 12.2 40 3-44 3-42 (304)
107 3c4n_A Uncharacterized protein 98.8 8E-09 2.7E-13 102.6 9.9 57 191-254 171-236 (405)
108 2wdq_A Succinate dehydrogenase 98.8 2.3E-08 8E-13 103.7 13.7 39 5-44 6-44 (588)
109 2cul_A Glucose-inhibited divis 98.8 1.7E-08 5.8E-13 91.9 11.2 41 212-253 83-124 (232)
110 3urh_A Dihydrolipoyl dehydroge 98.8 3.9E-08 1.3E-12 100.2 14.6 41 5-46 24-64 (491)
111 2gjc_A Thiazole biosynthetic e 98.8 1.1E-08 3.8E-13 96.8 9.7 38 6-44 65-104 (326)
112 3ces_A MNMG, tRNA uridine 5-ca 98.8 4.9E-09 1.7E-13 108.0 7.4 56 193-254 125-181 (651)
113 3d1c_A Flavin-containing putat 98.8 2E-08 7E-13 98.2 11.6 42 211-253 101-142 (369)
114 3lad_A Dihydrolipoamide dehydr 98.8 6.8E-08 2.3E-12 98.0 15.7 55 193-253 222-279 (476)
115 2h88_A Succinate dehydrogenase 98.8 9.9E-08 3.4E-12 99.2 16.8 58 191-254 154-217 (621)
116 3fbs_A Oxidoreductase; structu 98.8 3.4E-08 1.2E-12 93.3 12.3 41 212-253 71-111 (297)
117 2ywl_A Thioredoxin reductase r 98.8 4.3E-08 1.5E-12 85.4 11.9 41 211-253 69-109 (180)
118 2qae_A Lipoamide, dihydrolipoy 98.8 4.3E-08 1.5E-12 99.2 13.3 41 6-47 2-42 (468)
119 3s5w_A L-ornithine 5-monooxyge 98.8 6.9E-09 2.4E-13 105.0 7.0 37 6-43 30-71 (463)
120 2q7v_A Thioredoxin reductase; 98.8 2.1E-08 7.1E-13 96.3 10.1 38 6-45 8-45 (325)
121 2q0l_A TRXR, thioredoxin reduc 98.8 2.2E-08 7.4E-13 95.5 10.0 41 211-252 72-112 (311)
122 1vdc_A NTR, NADPH dependent th 98.8 1.9E-08 6.6E-13 96.9 9.4 41 211-253 83-123 (333)
123 2xve_A Flavin-containing monoo 98.8 1.5E-08 5.2E-13 102.3 8.9 40 7-47 3-48 (464)
124 2pyx_A Tryptophan halogenase; 98.8 1.4E-07 4.9E-12 96.8 16.4 57 193-255 176-234 (526)
125 1chu_A Protein (L-aspartate ox 98.7 2.8E-08 9.6E-13 102.0 10.6 39 5-45 7-45 (540)
126 1xdi_A RV3303C-LPDA; reductase 98.7 3.9E-08 1.3E-12 100.3 11.6 54 194-253 225-278 (499)
127 1fec_A Trypanothione reductase 98.7 9.6E-08 3.3E-12 97.1 14.3 55 193-253 232-287 (490)
128 3fg2_P Putative rubredoxin red 98.7 2.5E-08 8.6E-13 98.9 9.7 55 192-252 184-239 (404)
129 1kf6_A Fumarate reductase flav 98.7 6.5E-08 2.2E-12 100.6 12.8 57 192-254 134-197 (602)
130 3iwa_A FAD-dependent pyridine 98.7 8.6E-08 2.9E-12 97.1 12.9 55 192-252 202-256 (472)
131 3cp8_A TRNA uridine 5-carboxym 98.7 1.7E-08 5.8E-13 103.9 7.2 55 193-253 118-173 (641)
132 2r9z_A Glutathione amide reduc 98.7 1.9E-07 6.6E-12 94.2 14.5 54 194-253 209-263 (463)
133 1ges_A Glutathione reductase; 98.7 1.3E-07 4.5E-12 95.1 13.2 54 194-253 210-264 (450)
134 2v3a_A Rubredoxin reductase; a 98.7 5E-08 1.7E-12 96.0 9.6 54 193-252 188-241 (384)
135 1fl2_A Alkyl hydroperoxide red 98.7 3.7E-08 1.3E-12 93.9 8.4 43 211-253 69-114 (310)
136 2e5v_A L-aspartate oxidase; ar 98.7 3.1E-08 1.1E-12 100.1 7.9 35 8-44 1-35 (472)
137 3oc4_A Oxidoreductase, pyridin 98.6 1.1E-07 3.8E-12 95.7 11.5 55 192-253 189-243 (452)
138 3fpz_A Thiazole biosynthetic e 98.6 7.3E-09 2.5E-13 99.6 2.5 42 5-47 64-107 (326)
139 2a87_A TRXR, TR, thioredoxin r 98.6 1.2E-07 4.2E-12 91.4 10.9 52 402-454 277-328 (335)
140 3ics_A Coenzyme A-disulfide re 98.6 4.7E-07 1.6E-11 94.3 15.0 38 5-43 35-74 (588)
141 1hyu_A AHPF, alkyl hydroperoxi 98.6 1E-07 3.6E-12 97.5 9.3 43 211-253 280-325 (521)
142 3ntd_A FAD-dependent pyridine 98.6 6.1E-07 2.1E-11 93.1 15.2 37 6-43 1-39 (565)
143 1trb_A Thioredoxin reductase; 98.6 1.2E-07 4.2E-12 90.6 9.0 38 5-44 4-41 (320)
144 3ef6_A Toluene 1,2-dioxygenase 98.5 3.3E-07 1.1E-11 91.0 11.6 54 194-253 187-240 (410)
145 4gcm_A TRXR, thioredoxin reduc 98.5 2.8E-08 9.5E-13 94.9 3.6 43 1-46 2-44 (312)
146 3klj_A NAD(FAD)-dependent dehy 98.5 1.6E-07 5.5E-12 92.2 8.4 40 211-252 75-114 (385)
147 1q1r_A Putidaredoxin reductase 98.5 8.8E-07 3E-11 88.5 13.8 54 193-252 192-248 (431)
148 1jnr_A Adenylylsulfate reducta 98.5 1.9E-06 6.6E-11 90.3 16.4 36 6-42 22-61 (643)
149 4b1b_A TRXR, thioredoxin reduc 98.4 2.8E-07 9.5E-12 94.2 7.5 55 192-252 263-317 (542)
150 1c0p_A D-amino acid oxidase; a 98.4 2.3E-07 8E-12 90.5 5.7 38 5-43 5-42 (363)
151 4a5l_A Thioredoxin reductase; 98.4 1.8E-07 6.2E-12 89.2 4.0 35 5-40 3-37 (314)
152 3cgb_A Pyridine nucleotide-dis 98.3 1.8E-06 6E-11 87.6 10.8 42 211-252 106-150 (480)
153 2vdc_G Glutamate synthase [NAD 98.3 3.5E-07 1.2E-11 91.8 5.3 41 5-46 121-161 (456)
154 3r9u_A Thioredoxin reductase; 98.3 3.4E-07 1.2E-11 87.2 3.9 40 4-45 2-42 (315)
155 3l8k_A Dihydrolipoyl dehydroge 98.3 3.6E-07 1.2E-11 92.3 3.7 41 6-47 4-44 (466)
156 3g3e_A D-amino-acid oxidase; F 98.2 4.2E-07 1.4E-11 88.2 3.5 37 7-44 1-43 (351)
157 1mo9_A ORF3; nucleotide bindin 98.2 9.5E-07 3.3E-11 90.5 6.2 43 4-47 41-83 (523)
158 4b63_A L-ornithine N5 monooxyg 98.2 6E-07 2E-11 91.4 4.0 38 6-44 39-76 (501)
159 3cty_A Thioredoxin reductase; 98.2 7.9E-07 2.7E-11 85.0 4.5 37 6-44 16-52 (319)
160 3qfa_A Thioredoxin reductase 1 98.2 1.1E-06 3.6E-11 90.1 5.5 35 5-40 31-65 (519)
161 3k30_A Histamine dehydrogenase 98.2 9E-07 3.1E-11 93.8 5.1 42 5-47 390-431 (690)
162 3dk9_A Grase, GR, glutathione 98.2 8.1E-07 2.8E-11 90.0 4.5 40 5-46 19-58 (478)
163 1dxl_A Dihydrolipoamide dehydr 98.2 1.3E-06 4.3E-11 88.4 5.8 42 4-46 4-45 (470)
164 1zmd_A Dihydrolipoyl dehydroge 98.2 8.5E-07 2.9E-11 89.8 4.2 42 4-46 4-45 (474)
165 3ihm_A Styrene monooxygenase A 98.1 1.1E-06 3.7E-11 87.8 4.3 35 5-40 21-55 (430)
166 3c4a_A Probable tryptophan hyd 98.1 1.6E-06 5.3E-11 85.2 5.3 35 7-42 1-37 (381)
167 1zk7_A HGII, reductase, mercur 98.1 1.6E-06 5.6E-11 87.5 5.5 41 5-47 3-43 (467)
168 2yqu_A 2-oxoglutarate dehydrog 98.1 1.4E-06 4.9E-11 87.6 4.7 56 192-253 208-263 (455)
169 2eq6_A Pyruvate dehydrogenase 98.1 1.1E-06 3.9E-11 88.5 3.9 44 1-46 1-44 (464)
170 3dgz_A Thioredoxin reductase 2 98.1 1.6E-06 5.3E-11 88.2 4.7 42 4-46 4-53 (488)
171 1v59_A Dihydrolipoamide dehydr 98.1 1.8E-06 6.2E-11 87.5 4.6 41 5-46 4-44 (478)
172 1o94_A Tmadh, trimethylamine d 98.1 2.3E-06 7.9E-11 91.1 5.4 42 5-47 388-429 (729)
173 1ojt_A Surface protein; redox- 98.1 1.5E-06 5.2E-11 88.1 3.7 40 6-46 6-45 (482)
174 2hqm_A GR, grase, glutathione 98.1 1.9E-06 6.4E-11 87.3 4.3 41 5-47 10-50 (479)
175 3dgh_A TRXR-1, thioredoxin red 98.1 2.5E-06 8.7E-11 86.5 5.1 33 5-38 8-40 (483)
176 3g5s_A Methylenetetrahydrofola 98.1 3.8E-06 1.3E-10 80.5 5.8 38 6-44 1-38 (443)
177 2yqu_A 2-oxoglutarate dehydrog 98.0 2.4E-05 8.1E-10 78.7 12.0 36 6-42 167-202 (455)
178 3pl8_A Pyranose 2-oxidase; sub 98.0 2.9E-06 1E-10 88.4 4.8 38 6-44 46-83 (623)
179 1lvl_A Dihydrolipoamide dehydr 98.0 3E-06 1E-10 85.3 4.5 41 5-47 4-44 (458)
180 3ic9_A Dihydrolipoamide dehydr 98.0 3E-06 1E-10 86.1 4.5 39 6-46 8-46 (492)
181 1ebd_A E3BD, dihydrolipoamide 98.0 3.7E-06 1.3E-10 84.6 4.8 39 6-46 3-41 (455)
182 2wpf_A Trypanothione reductase 98.0 2.3E-06 8E-11 86.9 3.3 54 193-252 236-290 (495)
183 1onf_A GR, grase, glutathione 98.0 4.4E-06 1.5E-10 85.0 5.2 55 193-253 218-274 (500)
184 2a8x_A Dihydrolipoyl dehydroge 98.0 3E-06 1E-10 85.5 3.8 39 6-46 3-41 (464)
185 2eq6_A Pyruvate dehydrogenase 98.0 3.2E-05 1.1E-09 77.9 11.2 43 211-253 223-270 (464)
186 1ps9_A 2,4-dienoyl-COA reducta 98.0 4.7E-06 1.6E-10 88.0 5.2 41 5-46 372-412 (671)
187 3kd9_A Coenzyme A disulfide re 97.9 5.9E-06 2E-10 82.9 4.9 40 5-45 2-43 (449)
188 3h8l_A NADH oxidase; membrane 97.9 4.3E-06 1.5E-10 82.9 3.5 36 6-42 1-39 (409)
189 1gte_A Dihydropyrimidine dehyd 97.9 6.6E-06 2.3E-10 90.9 5.1 41 6-46 187-227 (1025)
190 3gyx_A Adenylylsulfate reducta 97.9 7.6E-06 2.6E-10 85.6 5.2 37 6-43 22-64 (662)
191 1lqt_A FPRA; NADP+ derivative, 97.9 5.5E-06 1.9E-10 83.1 3.9 42 5-47 2-50 (456)
192 3h28_A Sulfide-quinone reducta 97.9 6.2E-06 2.1E-10 82.3 4.1 38 6-44 2-41 (430)
193 1y56_A Hypothetical protein PH 97.9 4.7E-06 1.6E-10 84.7 2.9 40 6-47 108-147 (493)
194 1ebd_A E3BD, dihydrolipoamide 97.9 7.1E-05 2.4E-09 75.1 11.5 36 6-42 170-205 (455)
195 2gag_A Heterotetrameric sarcos 97.8 5.5E-06 1.9E-10 90.8 3.2 41 6-47 128-168 (965)
196 1cjc_A Protein (adrenodoxin re 97.8 9.8E-06 3.3E-10 81.4 4.6 41 5-46 5-47 (460)
197 2gqw_A Ferredoxin reductase; f 97.8 1.4E-05 4.7E-10 79.1 5.6 43 1-43 1-45 (408)
198 2bc0_A NADH oxidase; flavoprot 97.8 1.1E-05 3.7E-10 82.0 4.9 38 6-44 35-75 (490)
199 1v59_A Dihydrolipoamide dehydr 97.8 5.4E-05 1.8E-09 76.6 10.0 36 6-42 183-218 (478)
200 1nhp_A NADH peroxidase; oxidor 97.8 8.4E-05 2.9E-09 74.4 11.2 36 5-41 148-183 (447)
201 2x8g_A Thioredoxin glutathione 97.8 1.3E-05 4.3E-10 83.6 4.8 33 5-38 106-138 (598)
202 1kdg_A CDH, cellobiose dehydro 97.7 1.8E-05 6.2E-10 81.5 5.0 37 4-41 5-41 (546)
203 2cdu_A NADPH oxidase; flavoenz 97.7 1.9E-05 6.6E-10 79.2 4.9 54 193-253 192-246 (452)
204 3sx6_A Sulfide-quinone reducta 97.7 1.6E-05 5.6E-10 79.4 4.3 35 6-41 4-41 (437)
205 1zmd_A Dihydrolipoyl dehydroge 97.7 0.00018 6.3E-09 72.5 11.7 36 6-42 178-213 (474)
206 1mo9_A ORF3; nucleotide bindin 97.7 0.00019 6.6E-09 73.3 11.8 42 211-252 268-314 (523)
207 2gqw_A Ferredoxin reductase; f 97.7 0.00028 9.4E-09 69.7 12.6 35 6-41 145-179 (408)
208 1nhp_A NADH peroxidase; oxidor 97.7 2.4E-05 8.3E-10 78.4 4.8 36 7-43 1-38 (447)
209 2hqm_A GR, grase, glutathione 97.7 0.00023 8E-09 71.8 12.0 42 211-252 239-283 (479)
210 1ojt_A Surface protein; redox- 97.7 0.00018 6.1E-09 72.8 11.1 43 211-253 239-285 (482)
211 2cdu_A NADPH oxidase; flavoenz 97.7 0.00032 1.1E-08 70.3 12.3 36 6-42 149-184 (452)
212 3t37_A Probable dehydrogenase; 97.6 2.2E-05 7.4E-10 80.5 3.5 36 5-41 16-52 (526)
213 1m6i_A Programmed cell death p 97.6 3E-05 1E-09 78.7 4.3 55 193-253 227-281 (493)
214 2wpf_A Trypanothione reductase 97.6 0.00039 1.3E-08 70.4 12.6 36 6-42 191-229 (495)
215 1onf_A GR, grase, glutathione 97.6 0.00035 1.2E-08 70.9 12.1 36 6-42 176-211 (500)
216 3vrd_B FCCB subunit, flavocyto 97.6 4E-05 1.4E-09 75.6 4.7 42 211-252 215-256 (401)
217 1lvl_A Dihydrolipoamide dehydr 97.6 0.00017 5.7E-09 72.5 9.2 35 6-41 171-205 (458)
218 2a8x_A Dihydrolipoyl dehydroge 97.6 0.00043 1.5E-08 69.6 11.9 43 211-253 225-270 (464)
219 1n4w_A CHOD, cholesterol oxida 97.5 5E-05 1.7E-09 77.2 4.7 39 4-43 3-41 (504)
220 1ju2_A HydroxynitrIle lyase; f 97.5 2.6E-05 8.8E-10 79.9 2.6 37 5-43 25-61 (536)
221 1m6i_A Programmed cell death p 97.5 0.00027 9.4E-09 71.6 10.1 35 6-41 180-218 (493)
222 3ic9_A Dihydrolipoamide dehydr 97.5 0.00057 1.9E-08 69.2 12.4 41 213-253 229-273 (492)
223 4eqs_A Coenzyme A disulfide re 97.5 6E-05 2E-09 75.2 4.9 37 7-43 1-38 (437)
224 2bc0_A NADH oxidase; flavoprot 97.5 0.00071 2.4E-08 68.5 12.5 36 5-41 193-228 (490)
225 1xhc_A NADH oxidase /nitrite r 97.5 5.1E-05 1.7E-09 73.9 3.7 34 6-41 8-41 (367)
226 1zk7_A HGII, reductase, mercur 97.5 0.00066 2.3E-08 68.3 12.0 42 211-253 229-270 (467)
227 3hyw_A Sulfide-quinone reducta 97.5 7.2E-05 2.5E-09 74.5 4.5 34 7-41 3-38 (430)
228 3s5w_A L-ornithine 5-monooxyge 97.4 0.0011 3.8E-08 66.5 13.1 43 211-253 329-376 (463)
229 1dxl_A Dihydrolipoamide dehydr 97.4 0.00042 1.4E-08 69.8 10.0 35 6-41 177-211 (470)
230 4g6h_A Rotenone-insensitive NA 97.4 5.4E-05 1.8E-09 76.8 3.4 36 5-41 41-76 (502)
231 3q9t_A Choline dehydrogenase a 97.4 6.3E-05 2.1E-09 77.4 3.8 37 4-41 4-41 (577)
232 1trb_A Thioredoxin reductase; 97.4 0.0011 3.7E-08 62.8 11.5 34 6-40 145-178 (320)
233 3qvp_A Glucose oxidase; oxidor 97.4 8.2E-05 2.8E-09 76.5 3.6 35 5-40 18-53 (583)
234 1coy_A Cholesterol oxidase; ox 97.4 0.00013 4.5E-09 74.1 5.0 38 4-42 9-46 (507)
235 3cgb_A Pyridine nucleotide-dis 97.3 0.0008 2.7E-08 67.9 10.6 36 5-41 185-220 (480)
236 2jbv_A Choline oxidase; alcoho 97.2 0.00015 5.1E-09 74.4 3.9 37 5-42 12-49 (546)
237 1gpe_A Protein (glucose oxidas 97.2 0.00019 6.5E-09 74.3 4.6 37 5-42 23-60 (587)
238 3fim_B ARYL-alcohol oxidase; A 97.2 9.9E-05 3.4E-09 75.8 2.3 36 6-42 2-38 (566)
239 3dk9_A Grase, GR, glutathione 97.2 0.0021 7.2E-08 64.8 11.7 34 6-40 187-220 (478)
240 3itj_A Thioredoxin reductase 1 97.1 0.0021 7.2E-08 61.2 9.8 34 6-40 173-206 (338)
241 2zbw_A Thioredoxin reductase; 97.1 0.003 1E-07 60.2 10.8 34 6-40 152-185 (335)
242 3dgh_A TRXR-1, thioredoxin red 97.0 0.0047 1.6E-07 62.3 12.1 32 6-38 187-218 (483)
243 3ab1_A Ferredoxin--NADP reduct 96.9 0.0027 9.1E-08 61.3 8.7 35 6-41 163-197 (360)
244 3dgz_A Thioredoxin reductase 2 96.8 0.0088 3E-07 60.3 12.6 33 6-39 185-217 (488)
245 3f8d_A Thioredoxin reductase ( 96.8 0.0069 2.4E-07 57.1 10.5 35 5-40 153-187 (323)
246 3llv_A Exopolyphosphatase-rela 96.6 0.0023 7.9E-08 52.5 5.4 39 1-40 1-39 (141)
247 3ado_A Lambda-crystallin; L-gu 96.5 0.002 6.8E-08 60.6 4.7 39 1-40 1-39 (319)
248 3k30_A Histamine dehydrogenase 96.4 0.0035 1.2E-07 66.2 6.5 35 6-41 523-559 (690)
249 3klj_A NAD(FAD)-dependent dehy 96.4 0.0025 8.7E-08 62.1 5.0 36 6-42 146-181 (385)
250 4gcm_A TRXR, thioredoxin reduc 96.3 0.0024 8.4E-08 60.2 4.4 36 6-42 145-180 (312)
251 2g1u_A Hypothetical protein TM 96.1 0.0058 2E-07 51.1 5.1 35 5-40 18-52 (155)
252 2hmt_A YUAA protein; RCK, KTN, 96.1 0.0058 2E-07 50.0 4.9 38 1-39 1-38 (144)
253 3fwz_A Inner membrane protein 96.1 0.0097 3.3E-07 48.7 6.1 35 5-40 6-40 (140)
254 2v3a_A Rubredoxin reductase; a 96.0 0.0065 2.2E-07 59.2 5.5 37 6-43 145-181 (384)
255 2dpo_A L-gulonate 3-dehydrogen 95.9 0.006 2E-07 57.6 4.7 39 1-40 1-39 (319)
256 1xhc_A NADH oxidase /nitrite r 95.9 0.0056 1.9E-07 59.3 4.7 35 7-42 144-178 (367)
257 3lk7_A UDP-N-acetylmuramoylala 95.8 0.0078 2.7E-07 60.0 5.2 35 5-40 8-42 (451)
258 1ges_A Glutathione reductase; 95.7 0.0083 2.8E-07 59.8 5.1 37 6-43 167-203 (450)
259 4a5l_A Thioredoxin reductase; 95.7 0.007 2.4E-07 57.0 4.3 34 6-40 152-185 (314)
260 1lss_A TRK system potassium up 95.7 0.011 3.9E-07 48.0 4.8 34 6-40 4-37 (140)
261 3ic5_A Putative saccharopine d 95.5 0.012 3.9E-07 46.3 4.3 35 5-40 4-39 (118)
262 2r9z_A Glutathione amide reduc 95.5 0.011 3.8E-07 59.2 5.1 37 6-43 166-202 (463)
263 1id1_A Putative potassium chan 95.5 0.02 6.8E-07 47.6 5.9 34 5-39 2-35 (153)
264 1q1r_A Putidaredoxin reductase 95.4 0.015 5.1E-07 57.6 5.4 36 6-42 149-184 (431)
265 3ef6_A Toluene 1,2-dioxygenase 95.4 0.015 5.3E-07 57.1 5.4 37 6-43 143-179 (410)
266 2x5o_A UDP-N-acetylmuramoylala 95.3 0.012 4.1E-07 58.4 4.4 37 5-42 4-40 (439)
267 4eqs_A Coenzyme A disulfide re 95.3 0.015 5.1E-07 57.7 5.0 36 6-42 147-182 (437)
268 3kd9_A Coenzyme A disulfide re 95.2 0.019 6.5E-07 57.2 5.4 37 5-42 147-183 (449)
269 3d1c_A Flavin-containing putat 95.1 0.017 6E-07 55.6 4.8 43 211-253 227-271 (369)
270 3c85_A Putative glutathione-re 95.0 0.028 9.6E-07 48.2 5.4 34 6-40 39-73 (183)
271 2q0l_A TRXR, thioredoxin reduc 94.9 0.022 7.4E-07 53.5 4.8 35 6-41 143-177 (311)
272 1f0y_A HCDH, L-3-hydroxyacyl-C 94.8 0.027 9.3E-07 52.7 5.2 34 5-39 14-47 (302)
273 3lxd_A FAD-dependent pyridine 94.8 0.027 9.1E-07 55.4 5.4 36 6-42 152-187 (415)
274 2qae_A Lipoamide, dihydrolipoy 94.8 0.025 8.4E-07 56.7 5.1 43 211-253 229-275 (468)
275 3gwf_A Cyclohexanone monooxyge 94.8 0.021 7.1E-07 58.3 4.6 36 5-41 177-212 (540)
276 2xve_A Flavin-containing monoo 94.8 0.025 8.5E-07 56.6 5.0 36 5-41 196-231 (464)
277 1fl2_A Alkyl hydroperoxide red 94.7 0.024 8.1E-07 53.1 4.5 35 6-41 144-178 (310)
278 4e12_A Diketoreductase; oxidor 94.7 0.032 1.1E-06 51.7 5.2 33 6-39 4-36 (283)
279 3fg2_P Putative rubredoxin red 94.6 0.03 1E-06 54.8 5.1 36 6-42 142-177 (404)
280 4ap3_A Steroid monooxygenase; 94.6 0.024 8.4E-07 57.9 4.5 37 5-42 190-226 (549)
281 1vl6_A Malate oxidoreductase; 94.6 0.029 9.9E-07 53.6 4.7 35 5-39 191-225 (388)
282 3urh_A Dihydrolipoyl dehydroge 94.5 0.027 9.1E-07 56.8 4.7 36 6-42 198-233 (491)
283 2vdc_G Glutamate synthase [NAD 94.5 0.035 1.2E-06 55.3 5.4 37 5-41 263-299 (456)
284 3uox_A Otemo; baeyer-villiger 94.5 0.023 7.9E-07 58.0 4.1 37 5-42 184-220 (545)
285 3ntd_A FAD-dependent pyridine 94.5 0.032 1.1E-06 57.3 5.3 36 6-42 151-186 (565)
286 2a9f_A Putative malic enzyme ( 94.5 0.031 1.1E-06 53.5 4.6 35 5-39 187-221 (398)
287 3oc4_A Oxidoreductase, pyridin 94.5 0.036 1.2E-06 55.2 5.4 36 6-42 147-182 (452)
288 1vdc_A NTR, NADPH dependent th 94.5 0.027 9.2E-07 53.4 4.3 36 6-42 159-194 (333)
289 3l8k_A Dihydrolipoyl dehydroge 94.5 0.035 1.2E-06 55.5 5.3 36 6-42 172-207 (466)
290 3eag_A UDP-N-acetylmuramate:L- 94.4 0.036 1.2E-06 52.5 4.9 35 5-40 3-38 (326)
291 2a87_A TRXR, TR, thioredoxin r 94.4 0.03 1E-06 53.2 4.4 35 6-41 155-189 (335)
292 4dio_A NAD(P) transhydrogenase 94.3 0.041 1.4E-06 53.2 5.1 35 5-40 189-223 (405)
293 2q7v_A Thioredoxin reductase; 94.3 0.032 1.1E-06 52.7 4.4 35 6-41 152-186 (325)
294 3dfz_A SIRC, precorrin-2 dehyd 94.3 0.042 1.4E-06 48.6 4.7 35 4-39 29-63 (223)
295 2gv8_A Monooxygenase; FMO, FAD 94.2 0.037 1.3E-06 55.0 4.9 37 5-42 211-248 (447)
296 1fec_A Trypanothione reductase 94.1 0.039 1.3E-06 55.6 4.8 37 6-43 187-226 (490)
297 1kyq_A Met8P, siroheme biosynt 94.1 0.03 1E-06 51.2 3.5 34 5-39 12-45 (274)
298 3lad_A Dihydrolipoamide dehydr 94.0 0.052 1.8E-06 54.4 5.5 36 6-42 180-215 (476)
299 3p2y_A Alanine dehydrogenase/p 94.0 0.041 1.4E-06 52.7 4.4 34 5-39 183-216 (381)
300 1xdi_A RV3303C-LPDA; reductase 93.9 0.054 1.9E-06 54.7 5.5 37 6-43 182-218 (499)
301 2x8g_A Thioredoxin glutathione 93.9 0.057 2E-06 55.9 5.6 33 6-39 286-318 (598)
302 4b1b_A TRXR, thioredoxin reduc 93.9 0.055 1.9E-06 55.1 5.3 35 6-41 223-257 (542)
303 3ics_A Coenzyme A-disulfide re 93.9 0.052 1.8E-06 56.0 5.3 37 6-43 187-223 (588)
304 1zej_A HBD-9, 3-hydroxyacyl-CO 93.9 0.05 1.7E-06 50.4 4.6 34 5-40 11-44 (293)
305 3k6j_A Protein F01G10.3, confi 93.8 0.062 2.1E-06 53.1 5.4 34 6-40 54-87 (460)
306 3cty_A Thioredoxin reductase; 93.8 0.039 1.3E-06 51.9 3.8 35 6-41 155-189 (319)
307 1hyu_A AHPF, alkyl hydroperoxi 93.7 0.043 1.5E-06 55.7 4.2 35 6-41 355-389 (521)
308 1cjc_A Protein (adrenodoxin re 93.6 0.052 1.8E-06 54.1 4.6 36 6-41 145-200 (460)
309 3i83_A 2-dehydropantoate 2-red 93.6 0.059 2E-06 50.9 4.8 33 7-40 3-35 (320)
310 3l4b_C TRKA K+ channel protien 93.6 0.06 2.1E-06 47.6 4.5 32 8-40 2-33 (218)
311 3hn2_A 2-dehydropantoate 2-red 93.5 0.058 2E-06 50.7 4.5 33 7-40 3-35 (312)
312 2raf_A Putative dinucleotide-b 93.5 0.073 2.5E-06 46.8 4.9 36 5-41 18-53 (209)
313 3iwa_A FAD-dependent pyridine 93.5 0.072 2.5E-06 53.3 5.3 36 6-42 159-195 (472)
314 3g0o_A 3-hydroxyisobutyrate de 93.4 0.068 2.3E-06 50.0 4.8 34 5-39 6-39 (303)
315 3qfa_A Thioredoxin reductase 1 93.3 0.091 3.1E-06 53.3 5.8 33 6-39 210-242 (519)
316 3mog_A Probable 3-hydroxybutyr 93.2 0.086 3E-06 52.7 5.4 35 5-40 4-38 (483)
317 1zcj_A Peroxisomal bifunctiona 93.2 0.081 2.8E-06 52.7 5.1 34 6-40 37-70 (463)
318 2hjr_A Malate dehydrogenase; m 93.2 0.079 2.7E-06 50.1 4.8 36 5-40 13-48 (328)
319 3ghy_A Ketopantoate reductase 93.1 0.094 3.2E-06 49.8 5.3 33 6-39 3-35 (335)
320 3k96_A Glycerol-3-phosphate de 93.1 0.09 3.1E-06 50.3 5.2 33 6-39 29-61 (356)
321 3doj_A AT3G25530, dehydrogenas 93.1 0.089 3E-06 49.4 5.0 35 5-40 20-54 (310)
322 3r9u_A Thioredoxin reductase; 93.1 0.079 2.7E-06 49.5 4.7 35 6-41 147-181 (315)
323 2ew2_A 2-dehydropantoate 2-red 93.0 0.08 2.7E-06 49.7 4.6 32 7-39 4-35 (316)
324 4dll_A 2-hydroxy-3-oxopropiona 93.0 0.076 2.6E-06 50.1 4.5 34 5-39 30-63 (320)
325 4dna_A Probable glutathione re 92.9 0.091 3.1E-06 52.4 5.1 36 6-42 170-205 (463)
326 1ks9_A KPA reductase;, 2-dehyd 92.9 0.091 3.1E-06 48.6 4.8 33 8-41 2-34 (291)
327 3o0h_A Glutathione reductase; 92.8 0.094 3.2E-06 52.7 5.1 36 6-42 191-226 (484)
328 2y0c_A BCEC, UDP-glucose dehyd 92.8 0.091 3.1E-06 52.5 4.8 33 6-39 8-40 (478)
329 1jw9_B Molybdopterin biosynthe 92.7 0.09 3.1E-06 47.6 4.3 34 6-39 31-64 (249)
330 3vtf_A UDP-glucose 6-dehydroge 92.7 0.09 3.1E-06 51.6 4.5 35 5-40 20-54 (444)
331 3g17_A Similar to 2-dehydropan 92.7 0.09 3.1E-06 48.9 4.4 33 7-40 3-35 (294)
332 3l6d_A Putative oxidoreductase 92.7 0.15 5.2E-06 47.7 6.0 35 5-40 8-42 (306)
333 3hwr_A 2-dehydropantoate 2-red 92.7 0.1 3.4E-06 49.2 4.7 32 6-39 19-50 (318)
334 3dtt_A NADP oxidoreductase; st 92.6 0.12 4E-06 46.7 5.0 35 5-40 18-52 (245)
335 1x13_A NAD(P) transhydrogenase 92.6 0.1 3.5E-06 50.8 4.8 34 5-39 171-204 (401)
336 4ffl_A PYLC; amino acid, biosy 92.5 0.11 3.9E-06 49.8 5.1 34 6-40 1-34 (363)
337 3pdu_A 3-hydroxyisobutyrate de 92.4 0.093 3.2E-06 48.6 4.1 33 7-40 2-34 (287)
338 1ldn_A L-lactate dehydrogenase 92.4 0.11 3.9E-06 48.8 4.6 39 1-39 1-40 (316)
339 3gg2_A Sugar dehydrogenase, UD 92.3 0.12 3.9E-06 51.3 4.8 33 7-40 3-35 (450)
340 4a7p_A UDP-glucose dehydrogena 92.3 0.13 4.3E-06 50.8 5.0 35 6-41 8-42 (446)
341 1l7d_A Nicotinamide nucleotide 92.2 0.13 4.5E-06 49.8 5.0 35 5-40 171-205 (384)
342 2ewd_A Lactate dehydrogenase,; 92.2 0.12 4.1E-06 48.7 4.6 35 6-40 4-38 (317)
343 3qha_A Putative oxidoreductase 92.2 0.1 3.5E-06 48.6 4.0 34 6-40 15-48 (296)
344 1lld_A L-lactate dehydrogenase 92.1 0.12 4E-06 48.8 4.5 36 5-40 6-42 (319)
345 1bg6_A N-(1-D-carboxylethyl)-L 92.1 0.13 4.3E-06 49.3 4.8 33 6-39 4-36 (359)
346 1pjc_A Protein (L-alanine dehy 92.1 0.14 4.9E-06 49.1 5.1 33 6-39 167-199 (361)
347 1pzg_A LDH, lactate dehydrogen 92.1 0.13 4.6E-06 48.6 4.8 35 6-40 9-43 (331)
348 2vns_A Metalloreductase steap3 92.1 0.18 6E-06 44.5 5.3 34 5-39 27-60 (215)
349 3lzw_A Ferredoxin--NADP reduct 92.1 0.1 3.5E-06 49.1 4.0 35 6-41 154-188 (332)
350 1lqt_A FPRA; NADP+ derivative, 92.0 0.12 3.9E-06 51.5 4.5 36 6-41 147-202 (456)
351 1t2d_A LDH-P, L-lactate dehydr 92.0 0.17 5.8E-06 47.7 5.4 35 6-40 4-38 (322)
352 3oj0_A Glutr, glutamyl-tRNA re 91.9 0.058 2E-06 44.1 1.8 33 6-39 21-53 (144)
353 1nyt_A Shikimate 5-dehydrogena 91.9 0.15 5.3E-06 46.7 4.9 34 5-39 118-151 (271)
354 2h78_A Hibadh, 3-hydroxyisobut 91.9 0.12 4.2E-06 48.2 4.3 34 5-39 2-35 (302)
355 3pef_A 6-phosphogluconate dehy 91.9 0.14 4.8E-06 47.4 4.6 33 7-40 2-34 (287)
356 3qsg_A NAD-binding phosphogluc 91.8 0.11 3.7E-06 48.8 3.9 36 4-39 22-57 (312)
357 3l9w_A Glutathione-regulated p 91.8 0.18 6.2E-06 49.3 5.5 35 5-40 3-37 (413)
358 3ktd_A Prephenate dehydrogenas 91.8 0.19 6.5E-06 47.7 5.5 35 4-39 6-40 (341)
359 3tl2_A Malate dehydrogenase; c 91.7 0.17 5.8E-06 47.4 4.9 35 5-39 7-41 (315)
360 3phh_A Shikimate dehydrogenase 91.6 0.18 6.3E-06 45.9 5.0 34 6-40 118-151 (269)
361 2wtb_A MFP2, fatty acid multif 91.6 0.18 6.1E-06 53.2 5.6 34 6-40 312-345 (725)
362 1o94_A Tmadh, trimethylamine d 91.6 0.15 5.1E-06 54.1 4.9 35 5-40 527-563 (729)
363 2egg_A AROE, shikimate 5-dehyd 91.5 0.17 5.7E-06 47.1 4.7 35 5-39 140-174 (297)
364 3d0o_A L-LDH 1, L-lactate dehy 91.4 0.16 5.5E-06 47.7 4.5 39 1-39 1-40 (317)
365 3rui_A Ubiquitin-like modifier 91.4 0.2 6.7E-06 47.2 5.0 35 5-39 33-67 (340)
366 1zud_1 Adenylyltransferase THI 91.3 0.17 5.7E-06 45.8 4.4 34 6-39 28-61 (251)
367 3pid_A UDP-glucose 6-dehydroge 91.3 0.16 5.5E-06 49.7 4.5 33 6-40 36-68 (432)
368 2eez_A Alanine dehydrogenase; 91.2 0.2 6.9E-06 48.2 5.1 34 5-39 165-198 (369)
369 1y6j_A L-lactate dehydrogenase 91.2 0.19 6.7E-06 47.2 4.9 35 5-39 6-41 (318)
370 2qyt_A 2-dehydropantoate 2-red 91.2 0.12 4E-06 48.6 3.4 31 7-38 9-45 (317)
371 3don_A Shikimate dehydrogenase 91.2 0.15 5.2E-06 46.8 4.0 36 5-40 116-151 (277)
372 3ego_A Probable 2-dehydropanto 91.2 0.18 6.2E-06 47.2 4.6 32 7-40 3-34 (307)
373 2pv7_A T-protein [includes: ch 91.1 0.24 8.2E-06 46.1 5.4 34 6-40 21-55 (298)
374 3g79_A NDP-N-acetyl-D-galactos 91.1 0.17 5.8E-06 50.3 4.5 35 6-41 18-54 (478)
375 3h8v_A Ubiquitin-like modifier 91.1 0.15 5.3E-06 47.0 4.0 35 5-39 35-69 (292)
376 1z82_A Glycerol-3-phosphate de 91.1 0.19 6.6E-06 47.6 4.8 33 6-39 14-46 (335)
377 3ggo_A Prephenate dehydrogenas 91.1 0.21 7.3E-06 46.8 5.0 34 6-39 33-67 (314)
378 3pwz_A Shikimate dehydrogenase 91.0 0.25 8.5E-06 45.2 5.3 35 5-39 119-153 (272)
379 1p77_A Shikimate 5-dehydrogena 91.0 0.16 5.5E-06 46.6 4.0 34 5-39 118-151 (272)
380 2gag_A Heterotetrameric sarcos 91.0 0.11 3.7E-06 57.0 3.3 36 6-42 284-319 (965)
381 1pjq_A CYSG, siroheme synthase 91.0 0.18 6.1E-06 50.1 4.6 34 5-39 11-44 (457)
382 3u62_A Shikimate dehydrogenase 91.0 0.28 9.7E-06 44.3 5.5 32 8-39 110-141 (253)
383 3jyo_A Quinate/shikimate dehyd 91.0 0.23 7.9E-06 45.7 5.0 35 5-39 126-160 (283)
384 3fbt_A Chorismate mutase and s 91.0 0.23 7.7E-06 45.7 4.9 35 5-39 121-155 (282)
385 4huj_A Uncharacterized protein 91.0 0.12 4.3E-06 45.6 3.1 32 6-38 23-55 (220)
386 2uyy_A N-PAC protein; long-cha 90.9 0.28 9.6E-06 46.0 5.7 33 7-40 31-63 (316)
387 1gte_A Dihydropyrimidine dehyd 90.9 0.18 6.3E-06 55.5 5.0 35 6-40 332-366 (1025)
388 3tnl_A Shikimate dehydrogenase 90.9 0.25 8.6E-06 46.2 5.2 35 5-39 153-187 (315)
389 4gwg_A 6-phosphogluconate dehy 90.8 0.24 8.3E-06 49.3 5.3 35 5-40 3-37 (484)
390 1mv8_A GMD, GDP-mannose 6-dehy 90.8 0.16 5.4E-06 50.2 4.0 31 8-39 2-32 (436)
391 1w4x_A Phenylacetone monooxyge 90.7 0.18 6.3E-06 51.3 4.5 35 6-41 186-220 (542)
392 2dvm_A Malic enzyme, 439AA lon 90.7 0.25 8.4E-06 48.4 5.1 33 5-37 185-219 (439)
393 2vhw_A Alanine dehydrogenase; 90.7 0.24 8.4E-06 47.8 5.1 34 5-39 167-200 (377)
394 4e21_A 6-phosphogluconate dehy 90.7 0.23 7.7E-06 47.5 4.8 33 6-39 22-54 (358)
395 3t4e_A Quinate/shikimate dehyd 90.6 0.3 1E-05 45.6 5.5 35 5-39 147-181 (312)
396 2qrj_A Saccharopine dehydrogen 90.6 0.16 5.5E-06 48.7 3.7 41 5-45 213-257 (394)
397 1npy_A Hypothetical shikimate 90.6 0.26 9E-06 45.1 4.9 34 6-39 119-152 (271)
398 1txg_A Glycerol-3-phosphate de 90.5 0.18 6.1E-06 47.8 3.9 30 8-38 2-31 (335)
399 3fbs_A Oxidoreductase; structu 90.5 0.14 4.6E-06 47.4 3.0 34 5-40 140-173 (297)
400 1guz_A Malate dehydrogenase; o 90.4 0.23 8E-06 46.5 4.6 32 8-40 2-35 (310)
401 2o3j_A UDP-glucose 6-dehydroge 90.4 0.2 7E-06 50.0 4.4 33 6-39 9-43 (481)
402 1edz_A 5,10-methylenetetrahydr 90.4 0.2 6.9E-06 46.7 4.0 34 5-39 176-210 (320)
403 1hyh_A L-hicdh, L-2-hydroxyiso 90.3 0.22 7.4E-06 46.7 4.3 32 7-39 2-35 (309)
404 2zyd_A 6-phosphogluconate dehy 90.3 0.23 7.9E-06 49.6 4.7 34 5-39 14-47 (480)
405 3pqe_A L-LDH, L-lactate dehydr 90.3 0.23 7.8E-06 46.8 4.4 35 5-39 4-39 (326)
406 3o8q_A Shikimate 5-dehydrogena 90.3 0.28 9.5E-06 45.1 4.9 35 5-39 125-159 (281)
407 3tum_A Shikimate dehydrogenase 90.3 0.33 1.1E-05 44.3 5.3 36 4-39 123-158 (269)
408 3c24_A Putative oxidoreductase 90.2 0.32 1.1E-05 44.9 5.4 33 6-39 11-44 (286)
409 1wdk_A Fatty oxidation complex 90.1 0.27 9.3E-06 51.7 5.2 34 6-40 314-347 (715)
410 2v6b_A L-LDH, L-lactate dehydr 90.1 0.24 8.2E-06 46.3 4.3 33 8-40 2-35 (304)
411 2q3e_A UDP-glucose 6-dehydroge 90.0 0.22 7.5E-06 49.7 4.2 33 6-39 5-39 (467)
412 2p4q_A 6-phosphogluconate dehy 90.0 0.34 1.2E-05 48.6 5.6 34 6-40 10-43 (497)
413 3h5n_A MCCB protein; ubiquitin 89.9 0.27 9.2E-06 46.9 4.6 33 6-38 118-150 (353)
414 1yj8_A Glycerol-3-phosphate de 89.9 0.23 7.8E-06 47.9 4.2 33 7-40 22-61 (375)
415 4ezb_A Uncharacterized conserv 89.8 0.25 8.7E-06 46.4 4.3 34 6-40 24-58 (317)
416 3gvi_A Malate dehydrogenase; N 89.7 0.31 1E-05 45.8 4.7 36 5-40 6-41 (324)
417 4gbj_A 6-phosphogluconate dehy 89.7 0.22 7.5E-06 46.3 3.7 34 6-40 5-38 (297)
418 3ond_A Adenosylhomocysteinase; 89.7 0.31 1.1E-05 48.2 4.9 34 5-39 264-297 (488)
419 4a9w_A Monooxygenase; baeyer-v 89.6 0.21 7.1E-06 47.4 3.7 33 6-40 163-195 (357)
420 2hk9_A Shikimate dehydrogenase 89.6 0.23 7.9E-06 45.6 3.8 33 6-39 129-161 (275)
421 2rir_A Dipicolinate synthase, 89.6 0.37 1.3E-05 44.8 5.3 35 5-40 156-190 (300)
422 3dfu_A Uncharacterized protein 89.6 0.1 3.6E-06 46.3 1.3 34 5-39 5-38 (232)
423 3cky_A 2-hydroxymethyl glutara 89.6 0.27 9.2E-06 45.7 4.3 33 6-39 4-36 (301)
424 1jay_A Coenzyme F420H2:NADP+ o 89.5 0.3 1E-05 42.7 4.4 31 8-39 2-33 (212)
425 1dlj_A UDP-glucose dehydrogena 89.5 0.21 7E-06 48.8 3.5 30 8-39 2-31 (402)
426 3d4o_A Dipicolinate synthase s 89.4 0.37 1.3E-05 44.7 5.1 35 5-40 154-188 (293)
427 1evy_A Glycerol-3-phosphate de 89.3 0.16 5.6E-06 48.8 2.7 31 8-39 17-47 (366)
428 1x0v_A GPD-C, GPDH-C, glycerol 89.3 0.18 6.3E-06 48.1 3.0 33 7-40 9-48 (354)
429 3gpi_A NAD-dependent epimerase 89.2 0.49 1.7E-05 43.4 5.7 34 6-40 3-36 (286)
430 2cvz_A Dehydrogenase, 3-hydrox 89.2 0.3 1E-05 45.1 4.2 32 7-40 2-33 (289)
431 3ius_A Uncharacterized conserv 89.2 0.28 9.6E-06 45.1 4.1 35 5-40 4-38 (286)
432 1ur5_A Malate dehydrogenase; o 89.1 0.34 1.2E-05 45.3 4.6 34 7-40 3-36 (309)
433 1vpd_A Tartronate semialdehyde 89.0 0.29 1E-05 45.4 4.1 32 7-39 6-37 (299)
434 3e8x_A Putative NAD-dependent 88.9 0.4 1.4E-05 42.6 4.8 35 5-40 20-55 (236)
435 2rcy_A Pyrroline carboxylate r 88.8 0.42 1.4E-05 43.3 5.0 35 6-41 4-42 (262)
436 2i6t_A Ubiquitin-conjugating e 88.8 0.31 1.1E-05 45.4 4.1 36 5-40 13-49 (303)
437 3h8l_A NADH oxidase; membrane 88.8 0.42 1.4E-05 46.6 5.2 50 193-252 219-268 (409)
438 3zwc_A Peroxisomal bifunctiona 88.8 0.38 1.3E-05 50.6 5.1 34 6-40 316-349 (742)
439 4g65_A TRK system potassium up 88.7 0.17 5.9E-06 50.2 2.4 33 7-40 4-36 (461)
440 4hv4_A UDP-N-acetylmuramate--L 88.7 0.26 9E-06 49.5 3.7 34 6-40 22-56 (494)
441 1y8q_A Ubiquitin-like 1 activa 88.7 0.34 1.2E-05 46.1 4.3 34 5-38 35-68 (346)
442 3d1l_A Putative NADP oxidoredu 88.7 0.35 1.2E-05 44.0 4.3 33 6-39 10-43 (266)
443 3vrd_B FCCB subunit, flavocyto 88.6 0.29 9.8E-06 47.6 3.9 36 6-41 2-38 (401)
444 3vh1_A Ubiquitin-like modifier 88.5 0.36 1.2E-05 49.0 4.5 34 6-39 327-360 (598)
445 2gf2_A Hibadh, 3-hydroxyisobut 88.5 0.39 1.3E-05 44.5 4.6 32 8-40 2-33 (296)
446 3ldh_A Lactate dehydrogenase; 88.5 0.36 1.2E-05 45.4 4.2 35 5-39 20-55 (330)
447 2d5c_A AROE, shikimate 5-dehyd 88.5 0.56 1.9E-05 42.6 5.5 33 5-39 116-148 (263)
448 3p7m_A Malate dehydrogenase; p 88.5 0.44 1.5E-05 44.7 4.9 36 5-40 4-39 (321)
449 2f1k_A Prephenate dehydrogenas 88.4 0.39 1.3E-05 44.0 4.5 31 8-39 2-32 (279)
450 4gsl_A Ubiquitin-like modifier 88.4 0.41 1.4E-05 48.6 4.8 35 5-39 325-359 (615)
451 2izz_A Pyrroline-5-carboxylate 88.4 0.47 1.6E-05 44.6 5.1 34 6-40 22-59 (322)
452 1leh_A Leucine dehydrogenase; 88.4 0.52 1.8E-05 45.0 5.3 35 4-39 171-205 (364)
453 2pgd_A 6-phosphogluconate dehy 88.3 0.46 1.6E-05 47.5 5.2 33 7-40 3-35 (482)
454 1np3_A Ketol-acid reductoisome 88.3 0.53 1.8E-05 44.6 5.4 33 6-39 16-48 (338)
455 1yqg_A Pyrroline-5-carboxylate 88.2 0.36 1.2E-05 43.8 4.1 31 8-39 2-33 (263)
456 1tt5_B Ubiquitin-activating en 88.2 0.5 1.7E-05 46.3 5.3 34 5-38 39-72 (434)
457 3vps_A TUNA, NAD-dependent epi 88.0 0.49 1.7E-05 44.1 5.0 37 4-41 5-42 (321)
458 3ngx_A Bifunctional protein fo 88.0 0.43 1.5E-05 43.3 4.2 33 5-38 149-182 (276)
459 1a4i_A Methylenetetrahydrofola 87.9 0.48 1.6E-05 43.6 4.5 34 4-38 163-197 (301)
460 2iz1_A 6-phosphogluconate dehy 87.9 0.53 1.8E-05 47.0 5.3 33 6-39 5-37 (474)
461 3gvp_A Adenosylhomocysteinase 87.9 0.5 1.7E-05 45.8 4.9 35 5-40 219-253 (435)
462 3ojo_A CAP5O; rossmann fold, c 87.9 0.38 1.3E-05 47.1 4.1 34 6-40 11-44 (431)
463 1hdo_A Biliverdin IX beta redu 87.7 0.61 2.1E-05 40.1 5.1 33 7-40 4-37 (206)
464 2pd4_A Enoyl-[acyl-carrier-pro 87.7 0.54 1.8E-05 43.0 4.9 39 1-40 1-42 (275)
465 2g5c_A Prephenate dehydrogenas 87.6 0.47 1.6E-05 43.6 4.5 33 7-39 2-35 (281)
466 2ahr_A Putative pyrroline carb 87.6 0.41 1.4E-05 43.4 4.0 33 6-39 3-35 (259)
467 3r6d_A NAD-dependent epimerase 87.6 0.72 2.5E-05 40.4 5.5 33 6-39 5-39 (221)
468 1gpj_A Glutamyl-tRNA reductase 87.5 0.52 1.8E-05 45.9 4.9 36 5-40 166-201 (404)
469 1pgj_A 6PGDH, 6-PGDH, 6-phosph 87.5 0.53 1.8E-05 47.0 5.0 31 8-39 3-33 (478)
470 3c7a_A Octopine dehydrogenase; 87.4 0.33 1.1E-05 47.3 3.5 30 7-37 3-33 (404)
471 1yb4_A Tartronic semialdehyde 87.2 0.32 1.1E-05 45.0 3.1 32 7-40 4-35 (295)
472 3nv9_A Malic enzyme; rossmann 87.2 0.59 2E-05 45.4 4.9 35 5-39 218-254 (487)
473 3fi9_A Malate dehydrogenase; s 87.1 0.59 2E-05 44.2 4.9 35 5-39 7-43 (343)
474 1a5z_A L-lactate dehydrogenase 87.1 0.42 1.5E-05 44.9 3.9 32 8-39 2-34 (319)
475 4a26_A Putative C-1-tetrahydro 87.1 0.56 1.9E-05 43.1 4.5 34 4-38 163-197 (300)
476 3ce6_A Adenosylhomocysteinase; 87.1 0.6 2E-05 46.5 5.0 34 5-39 273-306 (494)
477 4fk1_A Putative thioredoxin re 87.0 0.6 2E-05 43.3 4.9 34 6-40 146-180 (304)
478 3gt0_A Pyrroline-5-carboxylate 87.0 0.69 2.3E-05 41.6 5.1 33 7-39 3-38 (247)
479 2d4a_B Malate dehydrogenase; a 86.7 0.62 2.1E-05 43.4 4.8 33 8-40 1-33 (308)
480 3dhn_A NAD-dependent epimerase 86.7 0.47 1.6E-05 41.7 3.8 34 6-40 4-38 (227)
481 1b0a_A Protein (fold bifunctio 86.6 0.64 2.2E-05 42.4 4.6 34 4-38 157-191 (288)
482 3vku_A L-LDH, L-lactate dehydr 86.6 0.53 1.8E-05 44.2 4.2 36 4-39 7-43 (326)
483 1nvt_A Shikimate 5'-dehydrogen 86.5 0.42 1.5E-05 44.1 3.5 33 5-39 127-159 (287)
484 3tri_A Pyrroline-5-carboxylate 86.3 0.81 2.8E-05 42.0 5.2 34 6-39 3-38 (280)
485 3h9u_A Adenosylhomocysteinase; 86.3 0.69 2.4E-05 45.0 4.9 34 5-39 210-243 (436)
486 2dbq_A Glyoxylate reductase; D 86.3 0.86 2.9E-05 43.1 5.5 35 5-40 149-183 (334)
487 1lu9_A Methylene tetrahydromet 86.2 0.78 2.7E-05 42.3 5.1 34 5-39 118-152 (287)
488 1y56_A Hypothetical protein PH 86.1 1.4 4.8E-05 44.1 7.3 43 211-253 270-312 (493)
489 2h7i_A Enoyl-[acyl-carrier-pro 86.1 0.73 2.5E-05 41.9 4.9 37 3-40 4-43 (269)
490 3obb_A Probable 3-hydroxyisobu 86.1 0.6 2.1E-05 43.4 4.3 33 6-39 3-35 (300)
491 3o38_A Short chain dehydrogena 86.1 0.63 2.1E-05 42.2 4.4 34 5-39 21-56 (266)
492 4aj2_A L-lactate dehydrogenase 85.9 0.68 2.3E-05 43.6 4.6 35 5-39 18-53 (331)
493 4id9_A Short-chain dehydrogena 85.7 0.85 2.9E-05 43.1 5.3 36 5-41 18-54 (347)
494 1i36_A Conserved hypothetical 85.6 0.55 1.9E-05 42.6 3.7 30 8-38 2-31 (264)
495 3nrc_A Enoyl-[acyl-carrier-pro 85.6 0.79 2.7E-05 42.0 4.8 39 1-40 21-62 (280)
496 1oju_A MDH, malate dehydrogena 85.3 0.58 2E-05 43.3 3.7 33 8-40 2-35 (294)
497 3ba1_A HPPR, hydroxyphenylpyru 85.3 1.1 3.7E-05 42.3 5.7 36 5-41 163-198 (333)
498 4gx0_A TRKA domain protein; me 85.1 0.94 3.2E-05 46.3 5.6 34 7-41 349-382 (565)
499 3b1f_A Putative prephenate deh 85.1 0.75 2.6E-05 42.4 4.5 33 6-39 6-40 (290)
500 3q2o_A Phosphoribosylaminoimid 85.1 1.1 3.7E-05 43.3 5.8 35 5-40 13-47 (389)
No 1
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=4.7e-51 Score=417.32 Aligned_cols=443 Identities=49% Similarity=0.896 Sum_probs=328.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHh-cCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASK-SGL 83 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~-lgl 83 (496)
..+||+|||||++||+||+.|+++|+.+|+|+|+++++||++.+...+|..+|.|++++++..+...+++++++++ +|+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lgl 82 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVELGANWVEGVNGGKMNPIWPIVNSTLKL 82 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEESSCCEEEEESSSSCCTHHHHHHTTSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcCC
Confidence 5689999999999999999999999723999999999999999999999999999999985332356789999999 999
Q ss_pred ccccccCCCcceEEEcCCCcccChhHHHHHHHHH------HHHHHHHhccccccchhH--HHHHHhhhcCCCCCCChHHH
Q 010995 84 RTCFSDYTNARYNIYDRSGKIIPSGVAADSYKKA------VESAIANLKNLEATNSNI--GEVIKAATELPSSPKTPLEL 155 (496)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 155 (496)
......+......++..+|..++.+.....+... .+............+.+. .+++... ....+..+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~~~~~~~~~ 160 (472)
T 1b37_A 83 RNFRSDFDYLAQNVYKEDGGVYDEDYVQKRIELADSVEEMGEKLSATLHASGRDDMSILAMQRLNEH--QPNGPATPVDM 160 (472)
T ss_dssp CEEECCCTTGGGCEECSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHTSCTTCTTCCBHHHHHHHHHT--SSSSCCSHHHH
T ss_pred ceeeccCccccceeEcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHHHHHHHhhh--cccccccHHHH
Confidence 8765444443344666788877755443332221 111111111111122222 2233321 11112334455
Q ss_pred HHHHHHhhcccc------ccC---CcccccccCCcceeeeCcccHHHHHHHHHHhhccC--CCCCccccceeeCceeEEE
Q 010995 156 AIDFILHDFEMA------EVE---PISTYVDFGEREFLVADERGYAHLLYKMAEEFLST--SDGKILDNRLKLNKVVREL 224 (496)
Q Consensus 156 ~~~~~~~~~~~~------~~~---~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~--~~~~~~g~~i~~~~~V~~I 224 (496)
.++++....+.. +.. ....+..++...++...++|++.++++|++.+.+. ..+.+.|++|++|++|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i 240 (472)
T 1b37_A 161 VVDYYKFDYEFAEPPRVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREI 240 (472)
T ss_dssp HHHHHHTHHHHSSCGGGBBSTTTSSCHHHHHHCSEEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEE
T ss_pred HHHHHHHhhhhcccccccchhhccccccccccCCceeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEE
Confidence 555544222111 110 01111123444456666899999999999987652 0111237899999999999
Q ss_pred EEcCCceEEEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEEEcCCCCCCCCCCCceEE
Q 010995 225 QHSRNGVTVKTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFLKFPCKFWPCSPGKEFFI 304 (496)
Q Consensus 225 ~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l~~~~~~w~~~~~~~~~~ 304 (496)
+.++++|+|++.+|++++||+||+|+|+..+.+.++.|.|+||+.+.+++++++++++.||++.|+++||+..++..+++
T Consensus 241 ~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~ 320 (472)
T 1b37_A 241 KYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFL 320 (472)
T ss_dssp EECSSCEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCCSTTCSEEE
T ss_pred EEcCCcEEEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCCCCCcceEE
Confidence 99999999999999899999999999999999866778999999999999999999999999999999998754555666
Q ss_pred eecCCCCccccceeccccCCCCcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhc-CCCCCCCCeeEecccCCCCCCC
Q 010995 305 YAHERRGYYTFWQHMENAYPGSNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMF-GPDIPNATDILVPRWWNNRFQR 383 (496)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~-~~~~~~~~~~~~~rw~~~~~~~ 383 (496)
+.+.+.+...+|..++...++.++|++++.++.+..|..++++++++.++++|++++ +...++++++.+++|..+||+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~ 400 (472)
T 1b37_A 321 YASSRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYK 400 (472)
T ss_dssp ECCSSTTSSCEEEECTTTSTTCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTTSCCCCCSEEECCCTTTCTTTS
T ss_pred ecccCCccceeeecccCCCCCCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCCCCCCCCceEEecccCCCCCCC
Confidence 665544555666655444567778888776656667888999999999999999999 5556778888999999999999
Q ss_pred cccCCCCCCCChHHHHHHhCCCCcEEEccccccCcCCccchHHHHHHHHHHHHHHHHHhccccccc
Q 010995 384 GSYSNYPIISDNQLVNSIRAPVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVEKIRKDNERNN 449 (496)
Q Consensus 384 g~~~~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~~l~~~~~~~~ 449 (496)
|+|+++.||.....++.+++|++||||||+++++.++|+||||+.||.+||++|++.++...+..+
T Consensus 401 G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~~~~~~~ 466 (472)
T 1b37_A 401 GTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKKMCKYH 466 (472)
T ss_dssp SSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHHCCC---
T ss_pred cccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHhCcCCCC
Confidence 999988999876678899999999999999999877899999999999999999999998877633
No 2
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=1.1e-47 Score=397.21 Aligned_cols=437 Identities=21% Similarity=0.308 Sum_probs=303.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeC-CcEEeecceEEecCCCCCCChHHHHHHhcCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFG-GVSVELGAGWIAGVGGKESNPVWELASKSGL 83 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~-g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl 83 (496)
.++||||||||++||+||+.|+++|+ +|+|||+++++|||++|.+.+ |..+|.|+++++. .++++.++++++|+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~-~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~----~~~~~~~l~~~lgl 77 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGL-NVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGP----TQNRILRLAKELGL 77 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTC-CEEEECSSSSSBTTCCEECCTTTSCEESSCCEECT----TCHHHHHHHHHTTC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCCCCCCceeecccCCCcccccCceEecC----CcHHHHHHHHHcCC
Confidence 46899999999999999999999999 699999999999999999885 9999999999987 67889999999999
Q ss_pred ccccccCCCcceEEEcCCCccc------Ch---hHHHHHHHHHHHHHHHHhcccc------------ccchhHHHHHHhh
Q 010995 84 RTCFSDYTNARYNIYDRSGKII------PS---GVAADSYKKAVESAIANLKNLE------------ATNSNIGEVIKAA 142 (496)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~------~~---~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 142 (496)
+...... ... .++..+|..+ +. ......+..+............ ....++.+++...
T Consensus 78 ~~~~~~~-~~~-~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~ 155 (520)
T 1s3e_A 78 ETYKVNE-VER-LIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKL 155 (520)
T ss_dssp CEEECCC-SSE-EEEEETTEEEEECSSSCCCCSHHHHHHHHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHHH
T ss_pred cceeccc-CCc-eEEEECCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCcCCCccccchhhhhccCHHHHHHhh
Confidence 8655322 221 2222344321 11 1111111122221111111110 0112344444431
Q ss_pred hcCCCCCCChHHHHHHHHHhhccccccCCcc------ccc---------ccCCcceeeeCcccHHHHHHHHHHhhccCCC
Q 010995 143 TELPSSPKTPLELAIDFILHDFEMAEVEPIS------TYV---------DFGEREFLVADERGYAHLLYKMAEEFLSTSD 207 (496)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---------~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~ 207 (496)
. .....+..++.+............+ .+. ...........++|++.++++|++.
T Consensus 156 ~-----~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~------ 224 (520)
T 1s3e_A 156 C-----WTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDL------ 224 (520)
T ss_dssp C-----SSHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHH------
T ss_pred C-----CCHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHH------
Confidence 1 0011111111111100000000000 000 0001112234589999999999988
Q ss_pred CCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEE
Q 010995 208 GKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFL 287 (496)
Q Consensus 208 ~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l 287 (496)
.|++|++|++|++|+.++++|+|++.+|++++||+||+|+|+..+.+ +.+.|++|+.+.+++++++++++.|+++
T Consensus 225 ---lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l 299 (520)
T 1s3e_A 225 ---LGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMK--IHFNPPLPMMRNQMITRVPLGSVIKCIV 299 (520)
T ss_dssp ---HGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGGG--SEEESCCCHHHHHHTTSCCBCCEEEEEE
T ss_pred ---cCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHcc--eeeCCCCCHHHHHHHHhCCCcceEEEEE
Confidence 57899999999999999889999999998999999999999999987 5588999999999999999999999999
Q ss_pred EcCCCCCCCCCCCceEEeecCCCCccccceeccccCCC-CcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCCC-C
Q 010995 288 KFPCKFWPCSPGKEFFIYAHERRGYYTFWQHMENAYPG-SNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGPD-I 365 (496)
Q Consensus 288 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~~-~ 365 (496)
.|+++||++..-.++....++......+|+.. .+++ ..++++++.+..+..|..++++|+++.++++|+++|+.. .
T Consensus 300 ~~~~~~w~~~~~~g~~~~~~~~~~~~~~~d~~--~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~~~~ 377 (520)
T 1s3e_A 300 YYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDT--KPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSLEA 377 (520)
T ss_dssp ECSSCGGGGGTEEEEEEECSTTCSCSEEEECC--CTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTCGGG
T ss_pred EeCCCcccCCCCCceeeccCCCCceEEEeeCC--CCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCcccc
Confidence 99999997521112222222222222233321 2233 378888887777788999999999999999999999854 4
Q ss_pred CCCCeeEecccCCCCCCCcccC-CCCCCCChHHHHHHhCCCCcEEEccccccCcCCccchHHHHHHHHHHHHHHHHHhcc
Q 010995 366 PNATDILVPRWWNNRFQRGSYS-NYPIISDNQLVNSIRAPVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVEKIRKD 444 (496)
Q Consensus 366 ~~~~~~~~~rw~~~~~~~g~~~-~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~~l~~~ 444 (496)
.+|.++.+++|.+++|+.|+|. ++.||....+.+.+++|++||||||++++..++|+||||+.||.+||++|++.++..
T Consensus 378 ~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~~~ 457 (520)
T 1s3e_A 378 LEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKI 457 (520)
T ss_dssp GCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHHTTSS
T ss_pred CCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHHHHhcC
Confidence 6788999999999999999997 788887655566788999999999999988788999999999999999999999754
Q ss_pred ccc-ccccCCccccccccccccc
Q 010995 445 NER-NNSETQNFLLEPLLALTLT 466 (496)
Q Consensus 445 ~~~-~~~~~~~~~~~~~~~~~~~ 466 (496)
... +-...|...++|.....+.
T Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~ 480 (520)
T 1s3e_A 458 PEDEIWQSEPESVDVPAQPITTT 480 (520)
T ss_dssp CGGGSSCCCCCCSSSCCCCCCCC
T ss_pred ccccccccCCccccCCccccccc
Confidence 442 2223455555555555433
No 3
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=2.5e-46 Score=384.96 Aligned_cols=412 Identities=18% Similarity=0.262 Sum_probs=285.2
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCCccc
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGLRTC 86 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl~~~ 86 (496)
+||+|||||++||+||+.|+++|+ +|+|||+++++|||++|.+.+|+.+|.|+++++. .+++++++++++|+...
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~-~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~----~~~~~~~~l~~lgl~~~ 114 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGF-KTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHW----HQSHVWREITRYKMHNA 114 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTC-CEEEECSSSBSBTTCCEEEETTEEEECSCCCBCT----TSHHHHHHHHHTTCTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCC-CEEEEeCCCCCCCcceecccCCeeecCCCeEecC----ccHHHHHHHHHcCCcce
Confidence 799999999999999999999999 6999999999999999999999999999999987 78899999999999543
Q ss_pred cccC---CCcceEEEcCC--Ccc--cChhHHHHHHHHHHHHHHH----Hhccc-----cc---------cchhHHHHHHh
Q 010995 87 FSDY---TNARYNIYDRS--GKI--IPSGVAADSYKKAVESAIA----NLKNL-----EA---------TNSNIGEVIKA 141 (496)
Q Consensus 87 ~~~~---~~~~~~~~~~~--g~~--~~~~~~~~~~~~~~~~~~~----~~~~~-----~~---------~~~~~~~~~~~ 141 (496)
.... ......++..+ |.. ++.......+......+.. ..... .. ...++.+++..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 194 (495)
T 2vvm_A 115 LSPSFNFSRGVNHFQLRTNPTTSTYMTHEAEDELLRSALHKFTNVDGTNGRTVLPFPHDMFYVPEFRKYDEMSYSERIDQ 194 (495)
T ss_dssp EEESCCCSSSCCEEEEESSTTCCEEECHHHHHHHHHHHHHHHHCSSSSTTTTTCSCTTSTTSSTTHHHHHTSBHHHHHHH
T ss_pred eecccccCCCceEEEecCCCCceeecCHHHHHHHHHHHHHHHHccchhhhhhcCCCCCCcccCcchhhhhhhhHHHHHHH
Confidence 3222 11111223233 433 3332222222222222211 00000 00 01134444443
Q ss_pred hhcCCCCCCChHHHHHHHHHhhccccccCCccc------ccccC-------CcceeeeCcccHHHHHHHHHHhhccCCCC
Q 010995 142 ATELPSSPKTPLELAIDFILHDFEMAEVEPIST------YVDFG-------EREFLVADERGYAHLLYKMAEEFLSTSDG 208 (496)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-------~~~~~~~~~~G~~~l~~~l~~~~~~~~~~ 208 (496)
.... .. ......++.+............+. +...+ ........++|++.++++|.+.+.+
T Consensus 195 ~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~---- 267 (495)
T 2vvm_A 195 IRDE--LS-LNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQSAFARRFWEEAAG---- 267 (495)
T ss_dssp HGGG--CC-HHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHHHHHHHHHHHHHT----
T ss_pred hhcc--CC-HHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHHHHHHHHHHHhhh----
Confidence 1100 00 011112222111111011111110 00000 0112234589999999999999876
Q ss_pred Cccc-cceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEE
Q 010995 209 KILD-NRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFL 287 (496)
Q Consensus 209 ~~~g-~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l 287 (496)
.| ++|++|++|++|+.+++++.|++.+|++++||+||+|+|+..+.+ +.|.|+||+.+.++++.+++.+..||++
T Consensus 268 --~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~--i~~~p~lp~~~~~ai~~~~~~~~~kv~l 343 (495)
T 2vvm_A 268 --TGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLST--IQFSPALSTERISAMQAGHVSMCTKVHA 343 (495)
T ss_dssp --TTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGGGG--SEEESCCCHHHHHHHHHCCCCCCEEEEE
T ss_pred --cCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHhh--eeeCCCCCHHHHHHHHhcCCCceeEEEE
Confidence 56 889999999999998888999999888899999999999999987 5688999999999999999999999999
Q ss_pred EcCCCCCCCCCCCceEEeecCCCCccccceeccccCCCCcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCCCCCC
Q 010995 288 KFPCKFWPCSPGKEFFIYAHERRGYYTFWQHMENAYPGSNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGPDIPN 367 (496)
Q Consensus 288 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~~~~~ 367 (496)
.|++++|. .+.....+...+..+|... ..+.+..+|+++. +.. .. +++++..+.++++|+++++. ..+
T Consensus 344 ~~~~~~~~-----~~~g~~~~~~~~~~~~~~~-~~~~~~~vl~~~~-~~~-~~---~~~~e~~~~~~~~L~~~~~~-~~~ 411 (495)
T 2vvm_A 344 EVDNKDMR-----SWTGIAYPFNKLCYAIGDG-TTPAGNTHLVCFG-NSA-NH---IQPDEDVRETLKAVGQLAPG-TFG 411 (495)
T ss_dssp EESCGGGG-----GEEEEECSSCSSCEEEEEE-ECTTSCEEEEEEE-CST-TC---CCTTTCHHHHHHHHHTTSTT-SCC
T ss_pred EECCccCC-----CceeEecCCCCcEEEecCC-CCCCCCeEEEEEe-Ccc-cc---CCCHHHHHHHHHHHHHhcCC-CCC
Confidence 99999984 2222222222333334321 1223456777644 332 22 45667788899999998763 456
Q ss_pred CCeeEecccCCCCCCCcccCCCCCCCChHHHHHHhCCCCcEEEccccccCcCCccchHHHHHHHHHHHHHHHHHhcccc
Q 010995 368 ATDILVPRWWNNRFQRGSYSNYPIISDNQLVNSIRAPVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVEKIRKDNE 446 (496)
Q Consensus 368 ~~~~~~~rw~~~~~~~g~~~~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~~l~~~~~ 446 (496)
+.++.+++|.++||++|+|++++||......+.+++|.+|||||||+++..++++||||+.||.+||++|++.+++..+
T Consensus 412 ~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~~~~~ 490 (495)
T 2vvm_A 412 VKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELGTKRE 490 (495)
T ss_dssp EEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHCCC--
T ss_pred ceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhccccC
Confidence 7888999999999999999999999866678899999999999999999778899999999999999999999875554
No 4
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=3.6e-46 Score=385.15 Aligned_cols=425 Identities=22% Similarity=0.365 Sum_probs=274.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCC-CCcEEEEeeCCCCCeEEEeeee-CCcEEeecceEEecCCCCCCChHHHHHHhcC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENG-IEDILILEASDRIGGRVRNEKF-GGVSVELGAGWIAGVGGKESNPVWELASKSG 82 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G-~~~V~vlEa~~~~GGr~~t~~~-~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lg 82 (496)
..+||||||||+|||+||+.|+++| + +|+|||+++++|||++|.+. +|+.+|+|+++++. ...++++.++.++|
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~-~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~---~~~~~~~~~~~~lg 82 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQ-DCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHD---TLTNPLFLEEAQLS 82 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCC-SEEEECSSSSSBTTCCEEECGGGCEEESSCCEECC---TTTCHHHHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCC-CEEEEeCCCCCCCceeeeecCCCcEEecCCeEEec---CCCChHHHHHHHhC
Confidence 4579999999999999999999999 9 79999999999999999886 79999999999986 23678888888888
Q ss_pred Cccccc--cCCCcceEEEcCCCcccC---hhHHHHHHHHHHHHHHHHhcc-ccccchhHHHHHHhhhcCCCCCCChH-HH
Q 010995 83 LRTCFS--DYTNARYNIYDRSGKIIP---SGVAADSYKKAVESAIANLKN-LEATNSNIGEVIKAATELPSSPKTPL-EL 155 (496)
Q Consensus 83 l~~~~~--~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 155 (496)
+..... .+.+.....+..++..+. ..........+.+........ ......++.+++.............. ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~l~~~l~~~~~~l~~~~~~ 162 (516)
T 1rsg_A 83 LNDGRTRFVFDDDNFIYIDEERGRVDHDKELLLEIVDNEMSKFAELEFHQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIR 162 (516)
T ss_dssp HHHCCCCEECCCCCCEEEETTTEECTTCTTTCHHHHHHHHHHHHHHHC-------CCBHHHHHHHHHHHHGGGSCHHHHH
T ss_pred CCCcceeEEECCCCEEEEcCCCccccccHHHHHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccCHHHHH
Confidence 742211 122222223333333322 111111111111111111100 00111223333322100000000000 00
Q ss_pred HHHHHHhhcc---ccccCCcc---cccccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEc-C
Q 010995 156 AIDFILHDFE---MAEVEPIS---TYVDFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHS-R 228 (496)
Q Consensus 156 ~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~-~ 228 (496)
....+...++ .......+ .+....+...+ .++ ++.++++|++.+ .+++|++|++|++|..+ +
T Consensus 163 ~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~--~~g-~~~l~~~l~~~l--------~~~~i~~~~~V~~I~~~~~ 231 (516)
T 1rsg_A 163 YLPQLCRYLELWHGLDWKLLSAKDTYFGHQGRNAF--ALN-YDSVVQRIAQSF--------PQNWLKLSCEVKSITREPS 231 (516)
T ss_dssp HHHHHHGGGHHHHTBCTTTSBHHHHCCCCSSCCEE--ESC-HHHHHHHHHTTS--------CGGGEETTCCEEEEEECTT
T ss_pred HHHHHHHHHHHHhCCChHHCChHHHHhhccCcchh--hhC-HHHHHHHHHHhC--------CCCEEEECCEEEEEEEcCC
Confidence 0011110000 00000111 01111222222 245 999999999886 34689999999999986 5
Q ss_pred CceEEEeCCCcEEEcCEEEEecChHHHhcC---------CcccCCCCcHHHHHHHhhCCCcceeEEEEEcCCCCCCCCCC
Q 010995 229 NGVTVKTEDGCVYEANYVILSASIGVLQSD---------LISFKPPLPKWKTEAIEKCDVMVYTKIFLKFPCKFWPCSPG 299 (496)
Q Consensus 229 ~~v~V~~~~G~~~~ad~VI~A~p~~~l~~~---------li~~~p~l~~~~~~~i~~~~~~~~~~v~l~~~~~~w~~~~~ 299 (496)
++|.|++.+|++++||+||+|+|+.+++.. .+.|.|+||+.+.+++++++++++.||++.|+++||++..
T Consensus 232 ~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~- 310 (516)
T 1rsg_A 232 KNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNES- 310 (516)
T ss_dssp SCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCSC-
T ss_pred CeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCCC-
Confidence 679999999988999999999999999742 3789999999999999999999999999999999998632
Q ss_pred CceEEeecCCCCc------------c---------------ccce------eccccCCCCcEEEEEeccccchhcccC--
Q 010995 300 KEFFIYAHERRGY------------Y---------------TFWQ------HMENAYPGSNILVVTLTNGESKRVEAQ-- 344 (496)
Q Consensus 300 ~~~~~~~~~~~~~------------~---------------~~~~------~~~~~~~~~~vl~~~~~~~~a~~~~~~-- 344 (496)
..+....+...++ + ..|. .+ ....+.++|+++..++.+..++.+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~~~~~g~~a~~~~~l~~ 389 (516)
T 1rsg_A 311 SKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNL-SKSTGVASFMMLMQAPLTNHIESIRE 389 (516)
T ss_dssp SEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEH-HHHTSCSEEEEEECBTHHHHHHHTTT
T ss_pred CcEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCceeEEEe-eecCCCcEEEEEecchHHHHHHhcCC
Confidence 2232222110000 0 0111 01 112356789988888888888888
Q ss_pred CcHHHHHH---HHHHHHHhcCC-----CCC---------CCC--eeEecccCCCCCCCcccCCCCCCCCh-HHHHHHh-C
Q 010995 345 PDEETLKE---AMEVLQDMFGP-----DIP---------NAT--DILVPRWWNNRFQRGSYSNYPIISDN-QLVNSIR-A 403 (496)
Q Consensus 345 ~~ee~~~~---~~~~L~~~~~~-----~~~---------~~~--~~~~~rw~~~~~~~g~~~~~~~g~~~-~~~~~~~-~ 403 (496)
+++++++. ++++|.++||. +.+ .|. ++.+++|.++||++|+|+++.||... .....+. .
T Consensus 390 ~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~ 469 (516)
T 1rsg_A 390 DKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSNG 469 (516)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTTTTCCCCCBC----CHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCCCccCCCcCCCCCHHHHHHHhccC
Confidence 88887654 66677766652 221 144 78899999999999999999999843 3455565 4
Q ss_pred CCCcEEEccccccCcCCccchHHHHHHHHHHHHHHHHHhcccc
Q 010995 404 PVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVEKIRKDNE 446 (496)
Q Consensus 404 p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~~l~~~~~ 446 (496)
|.++||||||+|+..++||||||++||.+||++|++.+....+
T Consensus 470 ~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~~~~ 512 (516)
T 1rsg_A 470 QDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLEHH 512 (516)
T ss_dssp SSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHGGGC
T ss_pred CCCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhhhhhh
Confidence 7799999999999888999999999999999999999886654
No 5
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=100.00 E-value=3.8e-45 Score=386.32 Aligned_cols=417 Identities=25% Similarity=0.465 Sum_probs=289.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCCc
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGLR 84 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl~ 84 (496)
..+||+|||||++||+||+.|+++|+ +|+|+|+++++||++.+.+..++.+|.|+++++.. ..+++..+.+++|++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~-~v~~~e~~~~~gg~~~~~~~~~~~~~~G~~~~~~~---~~~~~~~l~~~l~~~ 181 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGL---GGNPMAVVSKQVNME 181 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSSSSBTTCCEEEETTEEEESSCCEECCS---BTCHHHHHHHHHTCC
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-eEEEEecCCCCCCccccccccCchhhcCcEEEeCC---CCchHHHHHHHhCcc
Confidence 45899999999999999999999999 79999999999999999999999999999999872 356778899999986
Q ss_pred cccccCCCcceEEEcCCCcccChhHH---HHHHHHHHHHHHHHhcc--cc---c--cch---------------------
Q 010995 85 TCFSDYTNARYNIYDRSGKIIPSGVA---ADSYKKAVESAIANLKN--LE---A--TNS--------------------- 133 (496)
Q Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~--~~---~--~~~--------------------- 133 (496)
..... . ...++..+|..++.... ...+............. .. . .+.
T Consensus 182 ~~~~~--~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 258 (662)
T 2z3y_A 182 LAKIK--Q-KCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIE 258 (662)
T ss_dssp EEECC--S-CCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCEETTEECBHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccc--c-cceEEeCCCcCCCcchhhhhhHHHHHHHHHHHHHHhcccccccCCCCCCHHHHHHHHHHhhhhhhhhhhhh
Confidence 54322 1 12356667766553221 11111111110000000 00 0 000
Q ss_pred ------------------------------------------------------------hHHHHHHh---------hh-
Q 010995 134 ------------------------------------------------------------NIGEVIKA---------AT- 143 (496)
Q Consensus 134 ------------------------------------------------------------~~~~~~~~---------~~- 143 (496)
...++... ..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~s~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~ 338 (662)
T 2z3y_A 259 HWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQ 338 (662)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCC--------CCTHHHHHHHHHHHHTTTHHHHHHHTHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhhhhhhhcchhhhHHHHhhhhhhhhhcccccccchhhhhhhhhhhHHHHHhhhhhhhhhhhhHHHHHH
Confidence 00000000 00
Q ss_pred c-CCCCC-----CChHHHHHHHHHhhccccc---cCCccc-----ccccCCcceeeeCcccHHHHHHHHHHhhccCCCCC
Q 010995 144 E-LPSSP-----KTPLELAIDFILHDFEMAE---VEPIST-----YVDFGEREFLVADERGYAHLLYKMAEEFLSTSDGK 209 (496)
Q Consensus 144 ~-~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~ 209 (496)
. ....+ .......++|+....+... ...++. ...+.........++|++.|+++|++.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~l~~~La~~-------- 410 (662)
T 2z3y_A 339 ELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEG-------- 410 (662)
T ss_dssp HHTTSCCCSCSSCHHHHHHHHHHHHHHHHHTTSCGGGBBTTTTTTTGGGCCBSCCEEETTCTTHHHHHHTTT--------
T ss_pred HhhccCcccccccHHHHHHHHHHHHHHHHhcCCChhhcCHhhcCCCcccccCCceeeecCcHHHHHHHHHhc--------
Confidence 0 00000 0001112222222111111 001110 000111112345689999999998765
Q ss_pred ccccceeeCceeEEEEEcCCceEEEeCC------CcEEEcCEEEEecChHHHhc--CCcccCCCCcHHHHHHHhhCCCcc
Q 010995 210 ILDNRLKLNKVVRELQHSRNGVTVKTED------GCVYEANYVILSASIGVLQS--DLISFKPPLPKWKTEAIEKCDVMV 281 (496)
Q Consensus 210 ~~g~~i~~~~~V~~I~~~~~~v~V~~~~------G~~~~ad~VI~A~p~~~l~~--~li~~~p~l~~~~~~~i~~~~~~~ 281 (496)
.+|++|++|++|..++++|+|++.+ |++++||+||+|+|+.++++ ..+.|.|+||+.+.++++++++++
T Consensus 411 ---l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~LP~~k~~Ai~~l~~g~ 487 (662)
T 2z3y_A 411 ---LDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGN 487 (662)
T ss_dssp ---CEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECC
T ss_pred ---CceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCCCCHHHHHHHHhCCccc
Confidence 3699999999999999999988765 56899999999999999987 236799999999999999999999
Q ss_pred eeEEEEEcCCCCCCCCC-CCceEEeecCCCC-ccccceeccccCCCCcEEEEEeccccchhcccCCcHHHHHHHHHHHHH
Q 010995 282 YTKIFLKFPCKFWPCSP-GKEFFIYAHERRG-YYTFWQHMENAYPGSNILVVTLTNGESKRVEAQPDEETLKEAMEVLQD 359 (496)
Q Consensus 282 ~~~v~l~~~~~~w~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~ 359 (496)
+.||++.|+++||+... .++++....+..+ +..+|.. .+.++|++++.+..+..+..++++++++.++++|++
T Consensus 488 ~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~-----~~~~vL~~~~~G~~a~~~~~lsdee~~~~~l~~L~~ 562 (662)
T 2z3y_A 488 LNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNL-----YKAPILLALVAGEAAGIMENISDDVIVGRCLAILKG 562 (662)
T ss_dssp CEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECC-----SSSSEEEEEECTHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred eeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeC-----CCCCEEEEEeccHhHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999998621 1122111111222 1222322 145688888888888889999999999999999999
Q ss_pred hcCCC-CCCCCeeEecccCCCCCCCcccCCCCCCCChHHHHHHhCCC-------------CcEEEccccccCcCCccchH
Q 010995 360 MFGPD-IPNATDILVPRWWNNRFQRGSYSNYPIISDNQLVNSIRAPV-------------AGIFFTGEHTSERFNGYVHG 425 (496)
Q Consensus 360 ~~~~~-~~~~~~~~~~rw~~~~~~~g~~~~~~~g~~~~~~~~~~~p~-------------~~l~~aGd~~~~~~~g~~eg 425 (496)
+||.. .++|..+.+++|.++||++|+|++++||........+.+|+ +||||||++++..++|||||
T Consensus 563 ~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~G 642 (662)
T 2z3y_A 563 IFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHG 642 (662)
T ss_dssp HHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---------CCCCEEECSGGGCTTSTTSHHH
T ss_pred HhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccccccccccCCCCcEEEEeccccCCCCcCHHH
Confidence 99854 46899999999999999999999999998777777787775 68999999999888899999
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 010995 426 GYLAGIDTGKAVVEKIRKD 444 (496)
Q Consensus 426 A~~SG~~aA~~il~~l~~~ 444 (496)
|+.||.+||++|++.+.+.
T Consensus 643 Ai~SG~raA~~i~~~~~g~ 661 (662)
T 2z3y_A 643 ALLSGLREAGRIADQFLGA 661 (662)
T ss_dssp HHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHccCC
Confidence 9999999999999988753
No 6
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=100.00 E-value=7.7e-45 Score=387.85 Aligned_cols=420 Identities=26% Similarity=0.475 Sum_probs=292.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCCc
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGLR 84 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl~ 84 (496)
..++|+|||||++||+||+.|+++|+ +|+|||+++++||++.+.+..++.+|+|+++++.. ..+++..+.+++|+.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~-~v~v~E~~~~~GG~~~~~~~~~~~~~~G~~~~~~~---~~~~~~~l~~~lg~~ 352 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGL---GGNPMAVVSKQVNME 352 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSSCTTCCEEEETTEEEESSCCEECCS---BTCHHHHHHHHTTCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-cEEEEEecCcCCCceeeecccccchhcCceEecCC---CCchHHHHHHHhCCc
Confidence 46799999999999999999999999 79999999999999999999999999999999872 356788899999986
Q ss_pred cccccCCCcceEEEcCCCcccChhHH---HHHHHHHHHHHHHHhc--ccc-----ccch---------------------
Q 010995 85 TCFSDYTNARYNIYDRSGKIIPSGVA---ADSYKKAVESAIANLK--NLE-----ATNS--------------------- 133 (496)
Q Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~--~~~-----~~~~--------------------- 133 (496)
..... . ...++..+|..++.... ...+............ .+. +.+.
T Consensus 353 ~~~~~--~-~~~~~~~~G~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~slg~~~e~v~~~~er~~~~e~l~ 429 (852)
T 2xag_A 353 LAKIK--Q-KCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIE 429 (852)
T ss_dssp EEECC--C-CCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHTSCCCEETTEECBHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcc--c-cceEEecCCccccchhhhhhhhhhhhhHHHHHHHhhhhhhhcccCCCccHHHHHHHhhhhhhhhcchhHHH
Confidence 54322 1 12356667766553221 1111111100000000 000 0000
Q ss_pred ------------------------hHHHHHHh---hhc------------------------------------------
Q 010995 134 ------------------------NIGEVIKA---ATE------------------------------------------ 144 (496)
Q Consensus 134 ------------------------~~~~~~~~---~~~------------------------------------------ 144 (496)
.+.++... +..
T Consensus 430 ~~~~i~~~~~~i~~~~~~l~~~~~~l~~l~~~~~~~~~~~~p~~~~~e~s~rs~~~~l~~~~~~~~~l~~~~~~l~~~l~ 509 (852)
T 2xag_A 430 HWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQ 509 (852)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred HhhhhhhhhhhhhhhHHHHHHhHHHHHHHHHHHhhhhcccccccchhhhhhhhhhhhHHHHHHHHhhhhhhhhhHHHHHH
Confidence 00000000 000
Q ss_pred -----CCC--CCCChHHHHHHHHHhhccccc---cCCccc-----ccccCCcceeeeCcccHHHHHHHHHHhhccCCCCC
Q 010995 145 -----LPS--SPKTPLELAIDFILHDFEMAE---VEPIST-----YVDFGEREFLVADERGYAHLLYKMAEEFLSTSDGK 209 (496)
Q Consensus 145 -----~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~ 209 (496)
.+. .........++|+...++... ...++. ...+.....+..+++|++.|+++|++.
T Consensus 510 ~l~~~~~~~~~ls~~~~~~l~~~~~~~e~~~~~~l~~lSl~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~~-------- 581 (852)
T 2xag_A 510 ELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEG-------- 581 (852)
T ss_dssp HHHHSCCCSCSSCTTHHHHHHHHHHHHHHHHTSCTTTBBTTTTTGGGGGCCBSCCEEETTCTTHHHHHHTTT--------
T ss_pred hhhccCcccccCCHHHHHHHHHHHhhhcccccCChHhhhhhhhhhccccccCCceEEecCcHHHHHHHHHhC--------
Confidence 000 000111122223222221110 111110 000111112345689999999998765
Q ss_pred ccccceeeCceeEEEEEcCCceEEEeCC------CcEEEcCEEEEecChHHHhc--CCcccCCCCcHHHHHHHhhCCCcc
Q 010995 210 ILDNRLKLNKVVRELQHSRNGVTVKTED------GCVYEANYVILSASIGVLQS--DLISFKPPLPKWKTEAIEKCDVMV 281 (496)
Q Consensus 210 ~~g~~i~~~~~V~~I~~~~~~v~V~~~~------G~~~~ad~VI~A~p~~~l~~--~li~~~p~l~~~~~~~i~~~~~~~ 281 (496)
.+|++|++|++|.+++++|+|++.+ |++++||+||+|+|+.+|++ ..|.|.|+||..+.++++++++++
T Consensus 582 ---l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP~~k~~AI~~l~~g~ 658 (852)
T 2xag_A 582 ---LDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGN 658 (852)
T ss_dssp ---CCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECC
T ss_pred ---CCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcccccCCCCCHHHHHHHHcCCccc
Confidence 3699999999999999999988765 56899999999999999987 236799999999999999999999
Q ss_pred eeEEEEEcCCCCCCCCC-CCceEEeecCCCC-ccccceeccccCCCCcEEEEEeccccchhcccCCcHHHHHHHHHHHHH
Q 010995 282 YTKIFLKFPCKFWPCSP-GKEFFIYAHERRG-YYTFWQHMENAYPGSNILVVTLTNGESKRVEAQPDEETLKEAMEVLQD 359 (496)
Q Consensus 282 ~~~v~l~~~~~~w~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~ 359 (496)
+.||++.|+++||+... .++++.......+ +..+|... +.++|++++.+..+..+..++++++++.++++|++
T Consensus 659 v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~~-----~~pvLl~~v~G~~a~~l~~lsdeel~~~~l~~L~~ 733 (852)
T 2xag_A 659 LNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY-----KAPILLALVAGEAAGIMENISDDVIVGRCLAILKG 733 (852)
T ss_dssp CEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEECS-----SSSEEEEEECHHHHHHGGGSCHHHHHHHHHHHHHH
T ss_pred eEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEecCC-----CCCEEEEEecCcCHHHHhcCCHHHHHHHHHHHHHH
Confidence 99999999999998621 1122222222222 22333321 44688888888888889999999999999999999
Q ss_pred hcCCC-CCCCCeeEecccCCCCCCCcccCCCCCCCChHHHHHHhCCC-------------CcEEEccccccCcCCccchH
Q 010995 360 MFGPD-IPNATDILVPRWWNNRFQRGSYSNYPIISDNQLVNSIRAPV-------------AGIFFTGEHTSERFNGYVHG 425 (496)
Q Consensus 360 ~~~~~-~~~~~~~~~~rw~~~~~~~g~~~~~~~g~~~~~~~~~~~p~-------------~~l~~aGd~~~~~~~g~~eg 425 (496)
+||.. .++|..+.+++|.++||++|+|++++||.....+..+.+|+ +||||||++++..++|||||
T Consensus 734 ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveG 813 (852)
T 2xag_A 734 IFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHG 813 (852)
T ss_dssp HHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHH
T ss_pred HhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccccccccCCCCcEEEEehhHhCCCCcCHHH
Confidence 99854 46899999999999999999999999998766677777765 68999999999888899999
Q ss_pred HHHHHHHHHHHHHHHHhccccc
Q 010995 426 GYLAGIDTGKAVVEKIRKDNER 447 (496)
Q Consensus 426 A~~SG~~aA~~il~~l~~~~~~ 447 (496)
|+.||.+||++|++.+.+....
T Consensus 814 Ai~SG~RAA~~Il~~l~~~~~~ 835 (852)
T 2xag_A 814 ALLSGLREAGRIADQFLGAMYT 835 (852)
T ss_dssp HHHHHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHHHHHHhhCCCCC
Confidence 9999999999999999765553
No 7
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=1.1e-45 Score=375.94 Aligned_cols=410 Identities=19% Similarity=0.315 Sum_probs=284.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCCc
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGLR 84 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl~ 84 (496)
.++||+|||||++||+||++|+++|+ +|+|||+++++||++.+.+.+|..+|.|++++.. .++.+.++++++|+.
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~-~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~----~~~~~~~~~~~~g~~ 78 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGL-SVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSP----DQTALISLLDELGLK 78 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCTTCCEEEETTEEEECSCCCBCT----TCHHHHHHHHHTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC-cEEEEECCCCCCCceeccccCCceeccCCeEecC----ccHHHHHHHHHcCCc
Confidence 45799999999999999999999999 6999999999999999988899999999999887 677899999999998
Q ss_pred cccccCCCcceEEEcCCCcccC---------hhHHHHHHHHH---HHHHHHHhcccc---------ccchhHHHHHHhhh
Q 010995 85 TCFSDYTNARYNIYDRSGKIIP---------SGVAADSYKKA---VESAIANLKNLE---------ATNSNIGEVIKAAT 143 (496)
Q Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~---------~~~~~~~~~~~---~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 143 (496)
.... +......++..+|.... .....+ +... ++.+........ ....++.+++....
T Consensus 79 ~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~ 156 (453)
T 2yg5_A 79 TFER-YREGESVYISSAGERTRYTGDSFPTNETTKKE-MDRLIDEMDDLAAQIGAEEPWAHPLARDLDTVSFKQWLINQS 156 (453)
T ss_dssp EEEC-CCCSEEEEECTTSCEEEECSSSCSCCHHHHHH-HHHHHHHHHHHHHHHCSSCGGGSTTHHHHHSSBHHHHHHHHC
T ss_pred cccc-ccCCCEEEEeCCCceeeccCCCCCCChhhHHH-HHHHHHHHHHHHhhcCCCCCCCCcchhhhhhccHHHHHHhhc
Confidence 6542 22222222222233211 111111 1111 111111111000 01123444444311
Q ss_pred cCCCCCCChHHHHHHHHHhhccccccC-Cccc------ccccCC--------cceeeeCcccHHHHHHHHHHhhccCCCC
Q 010995 144 ELPSSPKTPLELAIDFILHDFEMAEVE-PIST------YVDFGE--------REFLVADERGYAHLLYKMAEEFLSTSDG 208 (496)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~--------~~~~~~~~~G~~~l~~~l~~~~~~~~~~ 208 (496)
........++.+.......... ..+. +...+. .......++|++.++++|++.
T Consensus 157 -----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~------- 224 (453)
T 2yg5_A 157 -----DDAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAEA------- 224 (453)
T ss_dssp -----SCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHHH-------
T ss_pred -----CCHHHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCChHHHHHHHHHh-------
Confidence 0001111111111000000000 0000 000010 011235689999999999988
Q ss_pred CccccceeeCceeEEEEEcCCc-eEEEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEE
Q 010995 209 KILDNRLKLNKVVRELQHSRNG-VTVKTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFL 287 (496)
Q Consensus 209 ~~~g~~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l 287 (496)
.|++|++|++|++|..++++ |.|++ +|+++.||+||+|+|+..+.+ +.+.|++|+.+.++++++++++..||++
T Consensus 225 --lg~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l 299 (453)
T 2yg5_A 225 --LGDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPNLYSR--ISYDPPLPRRQHQMHQHQSLGLVIKVHA 299 (453)
T ss_dssp --HGGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHGGGEEECCEEEEEE
T ss_pred --cCCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHHHHhc--CEeCCCCCHHHHHHHhcCCCcceEEEEE
Confidence 57899999999999998888 88887 677899999999999999887 5578999998899999999999999999
Q ss_pred EcCCCCCCCCCCCceEEeecCCCCccccceeccccCCC-CcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCCCCC
Q 010995 288 KFPCKFWPCSPGKEFFIYAHERRGYYTFWQHMENAYPG-SNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGPDIP 366 (496)
Q Consensus 288 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~~~~ 366 (496)
.|++++|+.. +........ ......+|... .+++ ..++++++.++.+..|..++++++++.++++|+++++....
T Consensus 300 ~~~~~~w~~~-~~~g~~~~~-~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~ 375 (453)
T 2yg5_A 300 VYETPFWRED-GLSGTGFGA-SEVVQEVYDNT--NHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGPKAE 375 (453)
T ss_dssp EESSCGGGGG-TEEEEEECT-TSSSCEEEECC--CTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCGGGG
T ss_pred EECCCCCCCC-CCCceeecC-CCCeEEEEeCC--CCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCccCC
Confidence 9999999752 111112222 12222233321 2233 46777777776777888899999999999999999987667
Q ss_pred CCCeeEecccCCCCCCCcccC-CCCCCCChHHHHHHhCCCCcEEEccccccCcCCccchHHHHHHHHHHHHHHHHHh
Q 010995 367 NATDILVPRWWNNRFQRGSYS-NYPIISDNQLVNSIRAPVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVEKIR 442 (496)
Q Consensus 367 ~~~~~~~~rw~~~~~~~g~~~-~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~~l~ 442 (496)
+|.++.+++|.+++|+.|+|. .+.||......+.+++|++||||||++++..++|++|||+.||.+||++|++.++
T Consensus 376 ~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 376 EPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp CCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC-
T ss_pred CccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHHHhc
Confidence 888999999999999999986 6788865555567889999999999999877889999999999999999998763
No 8
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=7e-44 Score=378.50 Aligned_cols=412 Identities=27% Similarity=0.470 Sum_probs=294.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeee-eCCcEEeecceEEecCCCCCCChHHHHHHhcCCc
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEK-FGGVSVELGAGWIAGVGGKESNPVWELASKSGLR 84 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~-~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl~ 84 (496)
.+||+|||||++||+||+.|+++|+ +|+|+|+++++|||++|.+ .+|..+|.|++++++ ...+++..+++++|++
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~-~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G---~~~np~~~l~~~lGl~ 411 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGI-KVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNG---CINNPVALMCEQLGIS 411 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSSSSCTTCCEECCSTTCCEESSCCEEEC---CTTCHHHHHHHHHTCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-cEEEEecccceeceeeeccccCCeEeccCCeEEeC---CccChHHHHHHHhCCc
Confidence 5799999999999999999999999 7999999999999999976 468999999999987 3677889999999997
Q ss_pred cccccCCCcceEEEcCCCcccChhHHH---HHHHHHHHHHHHHhcc---ccccch--hHHHHHHhhhcCCCCC-CChHHH
Q 010995 85 TCFSDYTNARYNIYDRSGKIIPSGVAA---DSYKKAVESAIANLKN---LEATNS--NIGEVIKAATELPSSP-KTPLEL 155 (496)
Q Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~ 155 (496)
....... ..++..+|......... ..+....+........ ..+... .+.+.+.......... ......
T Consensus 412 ~~~~~~~---~~l~~~~g~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~d~sl~~~~~~~~~~~l~~~gv~~~~l~~~ 488 (776)
T 4gut_A 412 MHKFGER---CDLIQEGGRITDPTIDKRMDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQ 488 (776)
T ss_dssp CEECCSC---CCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHGGGCCGGGCCBHHHHHHHHHHHHHHHSCCCCCHHHHH
T ss_pred ccccccc---cceEccCCcccchhHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHhcCCCccchhHH
Confidence 5542221 23555666654432211 1222222222111111 111111 1111111111101111 111222
Q ss_pred HHHHHHhhccccc---cCCc--------ccccccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEE
Q 010995 156 AIDFILHDFEMAE---VEPI--------STYVDFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVREL 224 (496)
Q Consensus 156 ~~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I 224 (496)
.+.+....++... ...+ ..+..+++.. ....+|++.++++|++. ++|++|++|++|
T Consensus 489 ~l~~~~~~l~~~~G~~l~~ls~~~~~~~~~~~~~~G~~--~~~~~G~~~l~~aLa~g-----------l~I~l~t~V~~I 555 (776)
T 4gut_A 489 VLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDH--TLLTPGYSVIIEKLAEG-----------LDIQLKSPVQCI 555 (776)
T ss_dssp HHHHHHHHHHHHHTSCTTSBBTTTTTGGGGSCCCCSCE--EECTTCTHHHHHHHHTT-----------SCEESSCCEEEE
T ss_pred HHHHHHHHHHHhcCCChHHcChhhhhhhhhHHhcCCCe--EEECChHHHHHHHHHhC-----------CcEEcCCeeEEE
Confidence 2222222111100 0000 0111223322 33478999999988754 579999999999
Q ss_pred EEcCCceEEEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEEEcCCCCCCCC-CCCceE
Q 010995 225 QHSRNGVTVKTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFLKFPCKFWPCS-PGKEFF 303 (496)
Q Consensus 225 ~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l~~~~~~w~~~-~~~~~~ 303 (496)
+.++++|+|++.+|++++||+||+|+|+.++++..+.|.|+||+.+.++++.++++++.||++.|+++||++. .+..++
T Consensus 556 ~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~f 635 (776)
T 4gut_A 556 DYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFF 635 (776)
T ss_dssp ECSSSSEEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEE
T ss_pred EEcCCEEEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceE
Confidence 9999999999999989999999999999999866678999999999999999999999999999999999752 123344
Q ss_pred Eeec---CCCCccccceeccccCCC-CcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCC-CCCCCCeeEecccCC
Q 010995 304 IYAH---ERRGYYTFWQHMENAYPG-SNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGP-DIPNATDILVPRWWN 378 (496)
Q Consensus 304 ~~~~---~~~~~~~~~~~~~~~~~~-~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~-~~~~~~~~~~~rw~~ 378 (496)
.+.. +..+...++... .+++ ..+|++++.++.+..+..++++|+++.++++|+++||. ..+.|..+.+++|.+
T Consensus 636 G~l~~~~~~~~~~~~~~d~--~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~ 713 (776)
T 4gut_A 636 GHVPPSASKRGLFAVFYDM--DPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWST 713 (776)
T ss_dssp EECCSSGGGTTEEEEEEES--CTTSCSCEEEEEECTHHHHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGG
T ss_pred EeecCCcCCCceEEEEecC--CCCCCceEEEEEecchhHHHHHcCCHHHHHHHHHHHHHHHhCcccccCcceEEEecCCC
Confidence 3321 222322332222 2233 46888888888888899999999999999999999985 457899999999999
Q ss_pred CCCCCcccCCCCCCCChHHHHHHhCCC-CcEEEccccccCcCCccchHHHHHHHHHHHHHHH
Q 010995 379 NRFQRGSYSNYPIISDNQLVNSIRAPV-AGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVE 439 (496)
Q Consensus 379 ~~~~~g~~~~~~~g~~~~~~~~~~~p~-~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~ 439 (496)
+||+.|+|+++.||.....+..+.+|+ ++||||||+++..++|+||||++||.+||++|+.
T Consensus 714 dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 714 DPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp CTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred CCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 999999999888888767778888886 8999999999988899999999999999999974
No 9
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=100.00 E-value=3e-43 Score=362.36 Aligned_cols=416 Identities=20% Similarity=0.277 Sum_probs=280.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeee--eCCcEEeecceEEecCCCCCCChHHHHHHhcC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEK--FGGVSVELGAGWIAGVGGKESNPVWELASKSG 82 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~--~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lg 82 (496)
..+||+|||||++||+||+.|+++|+ +|+|||+++++||++.+.+ ..++.+|.|+++++. .+..+.++++++|
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~-~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~g 106 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPE----KHRIVREYIRKFD 106 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEET----TCHHHHHHHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC-eEEEEECCCCCCCceeeeccCCCCchhhcCcccccc----hHHHHHHHHHHhC
Confidence 46799999999999999999999999 7999999999999999887 468899999999987 6778899999999
Q ss_pred Ccccccc-CCCcceEEEcCCCcccC-----------------hh---HHHHHHHHHHHHHHHHhcccc-------ccchh
Q 010995 83 LRTCFSD-YTNARYNIYDRSGKIIP-----------------SG---VAADSYKKAVESAIANLKNLE-------ATNSN 134 (496)
Q Consensus 83 l~~~~~~-~~~~~~~~~~~~g~~~~-----------------~~---~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 134 (496)
+...... ..... ++..+|.... .. ...+.+............... ....+
T Consensus 107 ~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 184 (498)
T 2iid_A 107 LRLNEFSQENDNA--WYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRTNCSYILNKYDTYS 184 (498)
T ss_dssp CCEEEECSCCTTS--EEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHHHHTHHHHHHHHHSCHHHHHHHHTTSB
T ss_pred CCceeecccCCcc--EEEeCCeeecccccccCccccccCCCccccCCCHHHHHHHHHHHHHHHHhhccHHHHHHHhhhhh
Confidence 8753211 11111 1112232110 00 011122111111110000000 00112
Q ss_pred HHHHHHhhhcCCCCCCChHHHHHHHHHhhcc-ccc-cCCcccccccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccc
Q 010995 135 IGEVIKAATELPSSPKTPLELAIDFILHDFE-MAE-VEPISTYVDFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILD 212 (496)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g 212 (496)
+.+++.... ...........+.+..... ... ...+.....+.....+..+++|++.|+++|++.+ +
T Consensus 185 ~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l---------~ 252 (498)
T 2iid_A 185 TKEYLIKEG---DLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIFAYEKRFDEIVDGMDKLPTAMYRDI---------Q 252 (498)
T ss_dssp HHHHHHHTS---CCCHHHHHHHHHHTTCGGGTTSBHHHHHHHHHHHTTCCCEEEETTCTTHHHHHHHHHT---------G
T ss_pred HHHHHHHcc---CCCHHHHHHHHHhcCcccchhHHHHHHHHHHhccccCcceEEeCCcHHHHHHHHHHhc---------c
Confidence 333433200 0000000111111000000 000 0000000011112234456899999999999985 3
Q ss_pred cceeeCceeEEEEEcCCceEEEeCCCc----EEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEEE
Q 010995 213 NRLKLNKVVRELQHSRNGVTVKTEDGC----VYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFLK 288 (496)
Q Consensus 213 ~~i~~~~~V~~I~~~~~~v~V~~~~G~----~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l~ 288 (496)
.+|++|++|++|+.++++|.|++.+|+ +++||+||+|+|+..+.+ +.|.|+||+.+.++++++++++..||++.
T Consensus 253 ~~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~--i~f~p~Lp~~~~~ai~~l~~~~~~kv~l~ 330 (498)
T 2iid_A 253 DKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRL--IKFNPPLLPKKAHALRSVHYRSGTKIFLT 330 (498)
T ss_dssp GGEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTT--SEEESCCCHHHHHHHHHCCEECEEEEEEE
T ss_pred cccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHhh--eecCCCCCHHHHHHHHhCCCcceeEEEEE
Confidence 489999999999999889999887764 589999999999999876 77889999999999999999999999999
Q ss_pred cCCCCCCCCCCCceEEeecCCCCccccceeccccCCCCcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCCCCCC-
Q 010995 289 FPCKFWPCSPGKEFFIYAHERRGYYTFWQHMENAYPGSNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGPDIPN- 367 (496)
Q Consensus 289 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~~~~~- 367 (496)
|+++||++..-.+...+.+. ......|.+ ...+.+..+|++++.++.+..|..++++++++.++++|+++++...+.
T Consensus 331 ~~~~~w~~~~~~~~~~~~~~-~~~~~~~~s-~~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~g~~~~~~ 408 (498)
T 2iid_A 331 CTTKFWEDDGIHGGKSTTDL-PSRFIYYPN-HNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLPKKDI 408 (498)
T ss_dssp ESSCGGGGGTCCSSEEEESS-TTCEEECCS-SCCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHHTCCHHHH
T ss_pred eCCCCccCCCccCCcccCCC-CcceEEECC-CCCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHcCCChhhh
Confidence 99999976211112222221 111122222 122345678888777777788888999999999999999999743221
Q ss_pred ---CCeeEecccCCCCCCCcccCCCCCCCChHHHHHHhCCCCcEEEccccccCcCCccchHHHHHHHHHHHHHHHHHhcc
Q 010995 368 ---ATDILVPRWWNNRFQRGSYSNYPIISDNQLVNSIRAPVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVEKIRKD 444 (496)
Q Consensus 368 ---~~~~~~~rw~~~~~~~g~~~~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~~l~~~ 444 (496)
.....+++|.++||+.|+|+++.|+....+.+.+.+|.+||||||++++.. +|+|+||+.||.+||++|++.++..
T Consensus 409 ~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~-~g~~~GAi~SG~raA~~i~~~l~~~ 487 (498)
T 2iid_A 409 QSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQA-HGWIDSTIKSGLRAARDVNLASENP 487 (498)
T ss_dssp HHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSS-SSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccC-CcCHHHHHHHHHHHHHHHHHHhcCC
Confidence 123678999999999999998899886667888999999999999999864 5899999999999999999998643
No 10
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=100.00 E-value=1.2e-42 Score=357.07 Aligned_cols=412 Identities=16% Similarity=0.252 Sum_probs=278.4
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeee-----------------CCcEEeecceEEecC
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKF-----------------GGVSVELGAGWIAGV 66 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~-----------------~g~~~d~G~~~~~~~ 66 (496)
++.+||+|||||++||+||+.|+++|+ +|+|||+++++||++.|.+. ++..+|.|++++..
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~-~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~- 86 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGY-KVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQ- 86 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEET-
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCC-CEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhccc-
Confidence 356899999999999999999999999 79999999999999988764 57889999999886
Q ss_pred CCCCCChHHHHHHhcCCccccccCCCcceEEE-cCC----CcccChhHH-HHHHHHHHHHHHHHh--ccccc-----cch
Q 010995 67 GGKESNPVWELASKSGLRTCFSDYTNARYNIY-DRS----GKIIPSGVA-ADSYKKAVESAIANL--KNLEA-----TNS 133 (496)
Q Consensus 67 ~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~-~~~----g~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~-----~~~ 133 (496)
.+ .+.++++++|+.............++ ..+ |..++.... ...+....+...... ...++ ...
T Consensus 87 ---~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 162 (489)
T 2jae_A 87 ---SH-ITLDYCRELGVEIQGFGNQNANTFVNYQSDTSLSGQSVTYRAAKADTFGYMSELLKKATDQGALDQVLSREDKD 162 (489)
T ss_dssp ---TS-THHHHHHHHTCCEEEECCCCTTSEEECCCSSTTTTCCEEHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCHHHHH
T ss_pred ---HH-HHHHHHHHcCCceEEccccCCCceEEecCCcccCCccccHHHHhhhhhccHHHHHHHHHhccccccccchhhHH
Confidence 55 89999999999754322222112233 333 554442211 111111111100000 01110 111
Q ss_pred hHHHHHHhhhcCCC----C----------------------CCChHHHHHHHHHhhccccccCCcccccccCCcceeeeC
Q 010995 134 NIGEVIKAATELPS----S----------------------PKTPLELAIDFILHDFEMAEVEPISTYVDFGEREFLVAD 187 (496)
Q Consensus 134 ~~~~~~~~~~~~~~----~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (496)
++.+++..+-.... . +.+........+.. .+...........+...
T Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 234 (489)
T 2jae_A 163 ALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRSGIGR--------NFSFDFGYDQAMMMFTP 234 (489)
T ss_dssp HHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHHTTTT--------TGGGGGCTTTSSSEEEE
T ss_pred HHHHHHHHhhhhhhccccccccchhhccCCCcccccCCCCCCcCHHHHhhhhHHH--------HHhhhhccccCccEEee
Confidence 34444442100000 0 00000000000000 00000011112234566
Q ss_pred cccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCC---cEEEcCEEEEecChHHHhcCCcccCC
Q 010995 188 ERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDG---CVYEANYVILSASIGVLQSDLISFKP 264 (496)
Q Consensus 188 ~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G---~~~~ad~VI~A~p~~~l~~~li~~~p 264 (496)
++|++.|+++|++.+. .++|++|++|++|+.++++|+|++.+| ++++||+||+|+|+..+.+ +.+
T Consensus 235 ~gG~~~l~~~l~~~l~--------~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~--l~~-- 302 (489)
T 2jae_A 235 VGGMDRIYYAFQDRIG--------TDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGR--LQN-- 302 (489)
T ss_dssp TTCTTHHHHHHHHHHC--------GGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTT--SEE--
T ss_pred cCCHHHHHHHHHHhcC--------CCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHh--Ccc--
Confidence 8999999999999852 168999999999999999999988776 6799999999999999986 434
Q ss_pred CCcHHHHHHHhhCCCcceeEEEEEcCCCCCCCC-CCCceEEeecCCCCccccceeccccCCCCcEEEE-Eeccccchhcc
Q 010995 265 PLPKWKTEAIEKCDVMVYTKIFLKFPCKFWPCS-PGKEFFIYAHERRGYYTFWQHMENAYPGSNILVV-TLTNGESKRVE 342 (496)
Q Consensus 265 ~l~~~~~~~i~~~~~~~~~~v~l~~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~-~~~~~~a~~~~ 342 (496)
++|+.+.++++++++++..||++.|+++||++. ...+.+...+ .+...++........+..+++. ++.+..+..|.
T Consensus 303 ~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~--~~~~~~~~~s~~~~~~~~~l~~~~~~g~~~~~~~ 380 (489)
T 2jae_A 303 NLPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTD--KDISQIMFPYDHYNSDRGVVVAYYSSGKRQEAFE 380 (489)
T ss_dssp CCCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEES--STTCEEECCSSSTTSSCEEEEEEEEETHHHHHHH
T ss_pred CCCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCC--CCceEEEeCCCCCCCCCCEEEEEeeCCchhhhhh
Confidence 688888999999999999999999999999753 1222232222 2222222221111112456664 55667777898
Q ss_pred cCCcHHHHHHHHHHHHHhcCC-CCCCCCeeEecccCCCCCCCcccCCCC------CCCChHHHHHHhCCCCcEEEccccc
Q 010995 343 AQPDEETLKEAMEVLQDMFGP-DIPNATDILVPRWWNNRFQRGSYSNYP------IISDNQLVNSIRAPVAGIFFTGEHT 415 (496)
Q Consensus 343 ~~~~ee~~~~~~~~L~~~~~~-~~~~~~~~~~~rw~~~~~~~g~~~~~~------~g~~~~~~~~~~~p~~~l~~aGd~~ 415 (496)
.++++++++.++++|+++++. ...++....+++|.+++|+.|+|+.+. |+......+.+++|.+||||||+++
T Consensus 381 ~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~faG~~~ 460 (489)
T 2jae_A 381 SLTHRQRLAKAIAEGSEIHGEKYTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIYFAGDHL 460 (489)
T ss_dssp TSCHHHHHHHHHHHHHHHHCGGGGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTEEECSGGG
T ss_pred cCCHHHHHHHHHHHHHHHcCcchhhhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcEEEeEHHh
Confidence 999999999999999999975 235577778899999999999998776 8876677888999999999999999
Q ss_pred cCcCCccchHHHHHHHHHHHHHHHHHhcc
Q 010995 416 SERFNGYVHGGYLAGIDTGKAVVEKIRKD 444 (496)
Q Consensus 416 ~~~~~g~~egA~~SG~~aA~~il~~l~~~ 444 (496)
+. ++++++||+.||.+||++|++.+.++
T Consensus 461 ~~-~~~~v~gAi~sg~~aA~~i~~~l~~~ 488 (489)
T 2jae_A 461 SN-AIAWQHGALTSARDVVTHIHERVAQE 488 (489)
T ss_dssp BS-STTSHHHHHHHHHHHHHHHHHHHHC-
T ss_pred cc-CccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 85 66899999999999999999988754
No 11
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=100.00 E-value=2.9e-42 Score=348.57 Aligned_cols=390 Identities=18% Similarity=0.272 Sum_probs=265.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeC---CcEEeecceEEecCCCCC-CChHHHHHHhc
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFG---GVSVELGAGWIAGVGGKE-SNPVWELASKS 81 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~---g~~~d~G~~~~~~~~~~~-~~~~~~l~~~l 81 (496)
++||||||||++||+||+.|+++|. +|+|||+++++||++.+.+.+ +..+|.|+++++. . ++.++++++++
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~-~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~----~~~~~~~~~~~~~ 75 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGK-KVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHR----KHHPRLAAELDRY 75 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTC-CEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCT----TTCHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCC-eEEEEecCCCccCeecceeccCCCCceEecCCeeeCC----CCcHHHHHHHHHh
Confidence 3699999999999999999999999 699999999999999998877 9999999999987 5 78899999999
Q ss_pred CCccccccCCCcceEEE-cCCCccc-----ChhHHHHHHHHHHHHHHHHhccc-----------cccchhHHHHHHhhhc
Q 010995 82 GLRTCFSDYTNARYNIY-DRSGKII-----PSGVAADSYKKAVESAIANLKNL-----------EATNSNIGEVIKAATE 144 (496)
Q Consensus 82 gl~~~~~~~~~~~~~~~-~~~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 144 (496)
|++........ ...+ ..++... +..... .+......+....... .....++.+++...
T Consensus 76 g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~s~~~~l~~~-- 150 (431)
T 3k7m_X 76 GIPTAAASEFT--SFRHRLGPTAVDQAFPIPGSEAV-AVEAATYTLLRDAHRIDLEKGLENQDLEDLDIPLNEYVDKL-- 150 (431)
T ss_dssp TCCEEECCCCC--EECCBSCTTCCSSSSCCCGGGHH-HHHHHHHHHHHHHTTCCTTTCTTSSSCGGGCSBHHHHHHHH--
T ss_pred CCeeeecCCCC--cEEEEecCCeecCCCCCCHHHHH-HHHHHHHHHHHHHHhcCCCCCccCcchhhhcCCHHHHHHhc--
Confidence 99865432211 1122 2223221 111111 1222222211111110 11112334444321
Q ss_pred CCCCCCChHHHHHHHHHhhc---cccccCCc---ccccccC--------CcceeeeCcccHHHHHHHHHHhhccCCCCCc
Q 010995 145 LPSSPKTPLELAIDFILHDF---EMAEVEPI---STYVDFG--------EREFLVADERGYAHLLYKMAEEFLSTSDGKI 210 (496)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~--------~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~ 210 (496)
... .........+.... ........ ..+...+ .... ...+|++.+++++++.
T Consensus 151 --~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~l~~~~~~~--------- 216 (431)
T 3k7m_X 151 --DLP-PVSRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE--VFSNGSADLVDAMSQE--------- 216 (431)
T ss_dssp --TCC-HHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE--EETTCTHHHHHHHHTT---------
T ss_pred --CCC-HHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh--hcCCcHHHHHHHHHhh---------
Confidence 000 00111111111100 00000000 0000000 0011 3478999999998876
Q ss_pred cccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEEEcC
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFLKFP 290 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l~~~ 290 (496)
.| +|++|++|++|+.++++++|++.+|++++||+||+|+|++.+++ +.+.|++|..+.+++..+.+....||.+.|+
T Consensus 217 ~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~--i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~ 293 (431)
T 3k7m_X 217 IP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRR--IVFTPALPERRRSVIEEGHGGQGLKILIHVR 293 (431)
T ss_dssp CS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHHHHCCCCCEEEEEEEEE
T ss_pred CC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhh--eeeCCCCCHHHHHHHHhCCCcceEEEEEEEC
Confidence 57 99999999999999889999999998899999999999999987 6789999999999999999999999999999
Q ss_pred CCCCCCCCCCceEEeecCCCCccccceeccccCCCCcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCCCCCCCCe
Q 010995 291 CKFWPCSPGKEFFIYAHERRGYYTFWQHMENAYPGSNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGPDIPNATD 370 (496)
Q Consensus 291 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~ 370 (496)
+++| +++. ..+......+.+. ....+..+++++..++. +. ..+++ .+.+.|+++++ ... +.+
T Consensus 294 ~~~~------~i~~--~~d~~~~~~~~~~-~~~~~~~~l~~~~~g~~---~~-~~~~~---~~~~~l~~~~~-~~~-~~~ 355 (431)
T 3k7m_X 294 GAEA------GIEC--VGDGIFPTLYDYC-EVSESERLLVAFTDSGS---FD-PTDIG---AVKDAVLYYLP-EVE-VLG 355 (431)
T ss_dssp SCCT------TEEE--EBSSSSSEEEEEE-ECSSSEEEEEEEEETTT---CC-TTCHH---HHHHHHHHHCT-TCE-EEE
T ss_pred CCCc------CceE--cCCCCEEEEEeCc-CCCCCCeEEEEEecccc---CC-CCCHH---HHHHHHHHhcC-CCC-ccE
Confidence 8874 2322 1222111222221 11134567777665443 32 33333 45567778775 333 778
Q ss_pred eEecccCCCCCCCcccCCCCCCCChHHHHHHhCCCCcEEEccccccCcCCccchHHHHHHHHHHHHHHHH
Q 010995 371 ILVPRWWNNRFQRGSYSNYPIISDNQLVNSIRAPVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVEK 440 (496)
Q Consensus 371 ~~~~rw~~~~~~~g~~~~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~~ 440 (496)
+..++|..+||++|+|+.++||+....++.+++|++||||||++++..++||||||++||.+||++|+..
T Consensus 356 ~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 356 IDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp EECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred eEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 8899999999999999999999977788999999999999999999889999999999999999999864
No 12
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=1e-40 Score=341.17 Aligned_cols=405 Identities=16% Similarity=0.274 Sum_probs=266.0
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCC------CCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChH
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENG------IEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPV 74 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G------~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~ 74 (496)
|+. +++||+|||||++||+||++|+++| + +|+|||+++++||+++|...+|+.+|.|++++.. .++.+
T Consensus 1 M~~-~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~-~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~----~~~~~ 74 (470)
T 3i6d_A 1 MSD-GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPL-ELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLE----RKKSA 74 (470)
T ss_dssp -----CEEEEEECCSHHHHHHHHHHHHHHTTTTCSE-EEEEECSSSSSCTTCCEECCTTCCEESSCCCEET----TCTHH
T ss_pred CCC-CCCcEEEECCCHHHHHHHHHHHHhccccCCCC-CEEEEECCCCCCceEEEeccCCEEeccChhhhhh----CCHHH
Confidence 533 4689999999999999999999999 8 7999999999999999999999999999999987 78899
Q ss_pred HHHHHhcCCccccccCCCcceEEEcCCCccc--ChhHH-------HHHHH-HH------HHHHHHHhc--cccccchhHH
Q 010995 75 WELASKSGLRTCFSDYTNARYNIYDRSGKII--PSGVA-------ADSYK-KA------VESAIANLK--NLEATNSNIG 136 (496)
Q Consensus 75 ~~l~~~lgl~~~~~~~~~~~~~~~~~~g~~~--~~~~~-------~~~~~-~~------~~~~~~~~~--~~~~~~~~~~ 136 (496)
+++++++|+.......... ..++..+|... +.... ...+. .. ......... .......++.
T Consensus 75 ~~l~~~lgl~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 153 (470)
T 3i6d_A 75 PQLVKDLGLEHLLVNNATG-QSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFILPASKTKDDQSLG 153 (470)
T ss_dssp HHHHHHTTCCTTEEECCCC-CEEEECSSCEEECCC---------------------CCSHHHHHHHHSCCCSSSSCCBHH
T ss_pred HHHHHHcCCcceeecCCCC-ccEEEECCEEEECCCCcccCCcCchHHhhccCcCCHHHHHHHhcCcccCCCCCCCCcCHH
Confidence 9999999998665321111 12223444432 21110 00000 00 000111111 0111122344
Q ss_pred HHHHhhhcCCCCCCChHHHHHHHHHhhccccccCCcc------cccc-------------------------cCCcceee
Q 010995 137 EVIKAATELPSSPKTPLELAIDFILHDFEMAEVEPIS------TYVD-------------------------FGEREFLV 185 (496)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-------------------------~~~~~~~~ 185 (496)
+++.... .....+.....+...........++ .+.. ......+.
T Consensus 154 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (470)
T 3i6d_A 154 EFFRRRV-----GDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQ 228 (470)
T ss_dssp HHHHHHS-----CHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EE
T ss_pred HHHHHhc-----CHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEE
Confidence 4443210 0000000111110000000000000 0000 00011344
Q ss_pred eCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChHHHhcCCcccCCC
Q 010995 186 ADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIGVLQSDLISFKPP 265 (496)
Q Consensus 186 ~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~ 265 (496)
..++|++.+++.|++.+. .++|++|++|++|+.++++|.|++.+|++++||+||+|+|+..+.+ +...|+
T Consensus 229 ~~~~g~~~l~~~l~~~l~--------~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~--l~~~~~ 298 (470)
T 3i6d_A 229 TLSTGLQTLVEEIEKQLK--------LTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAG--MLSELP 298 (470)
T ss_dssp EETTCTHHHHHHHHHTCC--------SEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHH--HTTTST
T ss_pred EeCChHHHHHHHHHHhcC--------CCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHH--HcCCch
Confidence 568999999999999853 2689999999999999989999999998899999999999999987 323332
Q ss_pred CcHHHHHHHhhCCCcceeEEEEEcCCCCCCCCC-CCceEEeecCCCCcc-cccee--ccc-cCCCCcEEEEEeccccchh
Q 010995 266 LPKWKTEAIEKCDVMVYTKIFLKFPCKFWPCSP-GKEFFIYAHERRGYY-TFWQH--MEN-AYPGSNILVVTLTNGESKR 340 (496)
Q Consensus 266 l~~~~~~~i~~~~~~~~~~v~l~~~~~~w~~~~-~~~~~~~~~~~~~~~-~~~~~--~~~-~~~~~~vl~~~~~~~~a~~ 340 (496)
..++++.+++.++.++++.|++++|+... +.+++....+..... ..|.+ ++. .+.+..++.+++.+..+..
T Consensus 299 ----~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~ 374 (470)
T 3i6d_A 299 ----AISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDES 374 (470)
T ss_dssp ----THHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCG
T ss_pred ----hhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCcc
Confidence 25788899999999999999999997632 334444332222111 23332 122 2334566777776666777
Q ss_pred cccCCcHHHHHHHHHHHHHhcCCCCCCCCeeEecccCCCCCCCcccCCCCCCCCh---HHHHHHhCCCCcEEEccccccC
Q 010995 341 VEAQPDEETLKEAMEVLQDMFGPDIPNATDILVPRWWNNRFQRGSYSNYPIISDN---QLVNSIRAPVAGIFFTGEHTSE 417 (496)
Q Consensus 341 ~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~rw~~~~~~~g~~~~~~~g~~~---~~~~~~~~p~~~l~~aGd~~~~ 417 (496)
+..++++++++.++++|.+++|.. ++|....+++|.+ +++.+.+|+.. ...+.+.+|.+||||||+++..
T Consensus 375 ~~~~~~~~~~~~~~~~l~~~~g~~-~~p~~~~~~~w~~------a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g 447 (470)
T 3i6d_A 375 IVDLSDNDIINIVLEDLKKVMNIN-GEPEMTCVTRWHE------SMPQYHVGHKQRIKELREALASAYPGVYMTGASFEG 447 (470)
T ss_dssp GGTSCHHHHHHHHHHHHGGGSCCC-SCCSEEEEEEEEE------EEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSC
T ss_pred ccCCCHHHHHHHHHHHHHHHhCCC-CCceEEEEEEcCC------ccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCC
Confidence 888999999999999999999864 5788889999965 67777788642 2445677788999999999864
Q ss_pred cCCccchHHHHHHHHHHHHHHHHH
Q 010995 418 RFNGYVHGGYLAGIDTGKAVVEKI 441 (496)
Q Consensus 418 ~~~g~~egA~~SG~~aA~~il~~l 441 (496)
.++++|+.||.++|++|++.+
T Consensus 448 ---~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 448 ---VGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp ---CSHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHHHHHHHh
Confidence 469999999999999999876
No 13
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=1.5e-39 Score=333.14 Aligned_cols=408 Identities=17% Similarity=0.201 Sum_probs=261.0
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHh
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASK 80 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~ 80 (496)
|....++||+|||||++||+||+.|+++|+ +|+|||+++++|||++|.+.+|+.+|.|++++.. .++.+.+++++
T Consensus 11 ~~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~-~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~----~~~~~~~~~~~ 85 (478)
T 2ivd_A 11 MPRTTGMNVAVVGGGISGLAVAHHLRSRGT-DAVLLESSARLGGAVGTHALAGYLVEQGPNSFLD----REPATRALAAA 85 (478)
T ss_dssp ------CCEEEECCBHHHHHHHHHHHTTTC-CEEEECSSSSSBTTCCEEEETTEEEESSCCCEET----TCHHHHHHHHH
T ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEEcCCCCCceeeeeccCCeeeecChhhhhh----hhHHHHHHHHH
Confidence 444567899999999999999999999999 6999999999999999999999999999999987 67889999999
Q ss_pred cCCccccccCC-CcceEEEcCCCccc--ChhHHHHHH-------HHHHHHHHHHhccc--cccchhHHHHHHhhhcCCCC
Q 010995 81 SGLRTCFSDYT-NARYNIYDRSGKII--PSGVAADSY-------KKAVESAIANLKNL--EATNSNIGEVIKAATELPSS 148 (496)
Q Consensus 81 lgl~~~~~~~~-~~~~~~~~~~g~~~--~~~~~~~~~-------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 148 (496)
+|+........ .....++..+|..+ +.... ..+ ..........+... .....++.+++....
T Consensus 86 ~gl~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~----- 159 (478)
T 2ivd_A 86 LNLEGRIRAADPAAKRRYVYTRGRLRSVPASPP-AFLASDILPLGARLRVAGELFSRRAPEGVDESLAAFGRRHL----- 159 (478)
T ss_dssp TTCGGGEECSCSSCCCEEEEETTEEEECCCSHH-HHHTCSSSCHHHHHHHHGGGGCCCCCTTCCCBHHHHHHHHT-----
T ss_pred cCCcceeeecCccccceEEEECCEEEECCCCHH-HhccCCCCCHHHHHHHhhhhhcCCCCCCCCCCHHHHHHHhh-----
Confidence 99975443221 11122333455532 22111 110 00111111111110 011223444444310
Q ss_pred CCChHHHHHHHHHhh-ccc--cccC----------------Cc-cccc----------c-cCCc----ceeeeCcccHHH
Q 010995 149 PKTPLELAIDFILHD-FEM--AEVE----------------PI-STYV----------D-FGER----EFLVADERGYAH 193 (496)
Q Consensus 149 ~~~~~~~~~~~~~~~-~~~--~~~~----------------~~-~~~~----------~-~~~~----~~~~~~~~G~~~ 193 (496)
.....+..+..+... +.. .... .+ .... . .... .....+++|++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~ 239 (478)
T 2ivd_A 160 GHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQV 239 (478)
T ss_dssp CHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTHH
T ss_pred CHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHHH
Confidence 000000000000000 000 0000 00 0000 0 0001 234556899999
Q ss_pred HHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEe---CCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHH
Q 010995 194 LLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKT---EDGCVYEANYVILSASIGVLQSDLISFKPPLPKWK 270 (496)
Q Consensus 194 l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~---~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~ 270 (496)
|+++|++. .|++|++|++|++|..+++++.|++ .+|++++||+||+|+|+..+.+ + .|++++..
T Consensus 240 l~~~l~~~---------lg~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~-l---l~~l~~~~ 306 (478)
T 2ivd_A 240 LIDALAAS---------LGDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAK-L---LRPLDDAL 306 (478)
T ss_dssp HHHHHHHH---------HGGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHHHH-H---HTTTCHHH
T ss_pred HHHHHHHH---------hhhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHHHH-H---hhccCHHH
Confidence 99999998 4679999999999999888888887 6777899999999999999886 2 26688888
Q ss_pred HHHHhhCCCcceeEEEEEcCCCCCCCCCCCceEEeecCCC-Cccccceec--cc-cCCCCcEEEEEeccccchhcccCCc
Q 010995 271 TEAIEKCDVMVYTKIFLKFPCKFWPCSPGKEFFIYAHERR-GYYTFWQHM--EN-AYPGSNILVVTLTNGESKRVEAQPD 346 (496)
Q Consensus 271 ~~~i~~~~~~~~~~v~l~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~--~~-~~~~~~vl~~~~~~~~a~~~~~~~~ 346 (496)
.++++.+++.++.++++.|++++|+.....+++....+.. ....+|.+. .. .+++..++++++.+..+..+..+++
T Consensus 307 ~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~ 386 (478)
T 2ivd_A 307 AALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDE 386 (478)
T ss_dssp HHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCH
T ss_pred HHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCH
Confidence 8999999999999999999999987522233332221211 112233321 11 2334567777777666667778899
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCeeEecccCCCCCCCcccCCCCCCCChH---HHHHHhCCCCcEEEccccccCcCCccc
Q 010995 347 EETLKEAMEVLQDMFGPDIPNATDILVPRWWNNRFQRGSYSNYPIISDNQ---LVNSIRAPVAGIFFTGEHTSERFNGYV 423 (496)
Q Consensus 347 ee~~~~~~~~L~~~~~~~~~~~~~~~~~rw~~~~~~~g~~~~~~~g~~~~---~~~~~~~p~~~l~~aGd~~~~~~~g~~ 423 (496)
+++.+.++++|.++++.. ..|....+++|.. +++.+.+|+... ..+.+.+ ++||||||+++.. +++
T Consensus 387 ~~~~~~~~~~l~~~~~~~-~~p~~~~~~~w~~------~~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~~~g---~gv 455 (478)
T 2ivd_A 387 DALAALAREELKALAGVT-ARPSFTRVFRWPL------GIPQYNLGHLERVAAIDAALQR-LPGLHLIGNAYKG---VGL 455 (478)
T ss_dssp HHHHHHHHHHHHHHHCCC-SCCSEEEEEEESS------CCBCCBTTHHHHHHHHHHHHHT-STTEEECSTTTSC---CSH
T ss_pred HHHHHHHHHHHHHHhCCC-CCCcEEEEEECCC------cccCCCcCHHHHHHHHHHHHhh-CCCEEEEccCCCC---CCH
Confidence 999999999999999754 4677788899965 566677776322 1223333 6899999999842 469
Q ss_pred hHHHHHHHHHHHHHHHHHhc
Q 010995 424 HGGYLAGIDTGKAVVEKIRK 443 (496)
Q Consensus 424 egA~~SG~~aA~~il~~l~~ 443 (496)
+||+.||.+||++|+..++.
T Consensus 456 ~gA~~SG~~aA~~i~~~l~~ 475 (478)
T 2ivd_A 456 NDCIRNAAQLADALVAGNTS 475 (478)
T ss_dssp HHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999887754
No 14
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=6.2e-39 Score=328.20 Aligned_cols=405 Identities=15% Similarity=0.236 Sum_probs=264.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCC--CCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENG--IEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSG 82 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G--~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lg 82 (496)
+++||+|||||++||+||++|+++| + +|+|||+++++||++.|.+.+|+.+|.|++++.. .+..+.++++++|
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~-~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~----~~~~~~~l~~~lg 77 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDL-NITLLEAGERLGGKVATYREDGFTIERGPDSYVA----RKHILTDLIEAIG 77 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTS-EEEEECSSSSSBTTCCEECSTTCCEESSCCCEET----TSTHHHHHHHHTT
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCC-CEEEEECCCCCCceeEEEeeCCEEEecCchhhhc----ccHHHHHHHHHcC
Confidence 3689999999999999999999999 8 7999999999999999999999999999999987 7889999999999
Q ss_pred CccccccCCCcceEEEcCCCcccC--hhH-------HHHH--------HHH-HHHHHHHHhccc---cccchhHHHHHHh
Q 010995 83 LRTCFSDYTNARYNIYDRSGKIIP--SGV-------AADS--------YKK-AVESAIANLKNL---EATNSNIGEVIKA 141 (496)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~g~~~~--~~~-------~~~~--------~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~ 141 (496)
+.......... ..+...+|...+ ... .... ... ............ .....++.+|+..
T Consensus 78 ~~~~~~~~~~~-~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 156 (475)
T 3lov_A 78 LGEKLVRNNTS-QAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTEEEKQEVADLLLHPSDSLRIPEQDIPLGEYLRP 156 (475)
T ss_dssp CGGGEEECCCC-CEEEEETTEEEECCSSEETTEESCHHHHTTCSSSCHHHHHHHHHHHHSCCTTCCCCSSCCBHHHHHHH
T ss_pred CcceEeecCCC-ceEEEECCEEEECCCcccccCcCchHHHhhccCCChhHHHHhhCcccCCcccccCCCCCcCHHHHHHH
Confidence 98765322111 112223443322 100 0000 001 111111101100 1112233444432
Q ss_pred hhcCCCCCCChHHHHHHHHHhhccccccCCcc------cc----------c------c------------cCCcceeeeC
Q 010995 142 ATELPSSPKTPLELAIDFILHDFEMAEVEPIS------TY----------V------D------------FGEREFLVAD 187 (496)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~----------~------~------------~~~~~~~~~~ 187 (496)
... ....+...+.+...........++ .+ . . ......+...
T Consensus 157 ~~~-----~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (475)
T 3lov_A 157 RLG-----DALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSL 231 (475)
T ss_dssp HHC-----HHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEE
T ss_pred HhC-----HHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEee
Confidence 100 000000001110000000000000 00 0 0 0012234566
Q ss_pred cccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCc
Q 010995 188 ERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIGVLQSDLISFKPPLP 267 (496)
Q Consensus 188 ~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~ 267 (496)
++|++.++++|++.+. .++|++|++|++|+.++++|+|++.+| +++||+||+|+|+..+.+ +.+.+++
T Consensus 232 ~~G~~~l~~~l~~~l~--------~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~--ll~~~~~- 299 (475)
T 3lov_A 232 ETGLESLIERLEEVLE--------RSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQ--LLPDAHL- 299 (475)
T ss_dssp TTCHHHHHHHHHHHCS--------SCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHH--HCTTSCC-
T ss_pred CChHHHHHHHHHhhcc--------CCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHH--HcCccCH-
Confidence 8999999999999853 268999999999999999999999998 899999999999999987 3334433
Q ss_pred HHHHHHHhhCCCcceeEEEEEcCCCCCCCCCCCceEEeecCCCCcc-cccee--ccccCCCCcEEEEEeccccchhcccC
Q 010995 268 KWKTEAIEKCDVMVYTKIFLKFPCKFWPCSPGKEFFIYAHERRGYY-TFWQH--MENAYPGSNILVVTLTNGESKRVEAQ 344 (496)
Q Consensus 268 ~~~~~~i~~~~~~~~~~v~l~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~vl~~~~~~~~a~~~~~~ 344 (496)
++++.+++.++.+|++.|+++++....+.++++...+..... ..|.+ ++...|+..++.+++.+..+..+..+
T Consensus 300 ----~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~l~~~~~~~~~~~~~~~ 375 (475)
T 3lov_A 300 ----PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPDHTVLRAFVGRPGNDHLVHE 375 (475)
T ss_dssp ----HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTTEEEEEEEECBTTBCGGGGS
T ss_pred ----HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCCcEEEEEEeCCCCCCcccCC
Confidence 677899999999999999998843322334444333322211 12322 12223334556666666666778889
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCeeEecccCCCCCCCcccCCCCCCCCh---HHHHHHhCCCCcEEEccccccCcCCc
Q 010995 345 PDEETLKEAMEVLQDMFGPDIPNATDILVPRWWNNRFQRGSYSNYPIISDN---QLVNSIRAPVAGIFFTGEHTSERFNG 421 (496)
Q Consensus 345 ~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~rw~~~~~~~g~~~~~~~g~~~---~~~~~~~~p~~~l~~aGd~~~~~~~g 421 (496)
+++++++.++++|++++|.. ++|....+++|.+ +++.+.+|+.. ...+.+.+|.+||||||+++.. .
T Consensus 376 ~~e~~~~~~~~~L~~~~g~~-~~p~~~~v~~w~~------a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g---~ 445 (475)
T 3lov_A 376 SDEVLQQAVLQDLEKICGRT-LEPKQVIISRLMD------GLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDG---V 445 (475)
T ss_dssp CHHHHHHHHHHHHHHHHSSC-CCCSEEEEEEEEE------EEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---S
T ss_pred CHHHHHHHHHHHHHHHhCCC-CCCeEEEEEEccc------CCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCC---C
Confidence 99999999999999999864 4788899999976 56677777632 2345566788999999999864 4
Q ss_pred cchHHHHHHHHHHHHHHHHHhcccc
Q 010995 422 YVHGGYLAGIDTGKAVVEKIRKDNE 446 (496)
Q Consensus 422 ~~egA~~SG~~aA~~il~~l~~~~~ 446 (496)
+|++|+.||.+||++|+..++....
T Consensus 446 g~~~a~~sG~~aA~~i~~~l~~~~~ 470 (475)
T 3lov_A 446 GLPDCVASAKTMIESIELEQSHTDE 470 (475)
T ss_dssp SHHHHHHHHHHHHHHHHHTC-----
T ss_pred CHHHHHHHHHHHHHHHHHHhhcccc
Confidence 6999999999999999998875544
No 15
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=1.4e-38 Score=328.00 Aligned_cols=412 Identities=17% Similarity=0.229 Sum_probs=261.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCCcc
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGLRT 85 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl~~ 85 (496)
++||+|||||++||+||+.|+++|+ +|+|||+++++||+++|.+.+|+.+|.|++++.. .++.+.++++++|+..
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~-~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~----~~~~~~~~~~~lgl~~ 87 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTE----SEGDVTFLIDSLGLRE 87 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSSSSCSSCCEEEETTEEEESSCCCBCC----CSHHHHHHHHHTTCGG
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-cEEEEEeCCCCCCceeeeccCCeEEecCCccccc----CcHHHHHHHHHcCCcc
Confidence 5799999999999999999999999 7999999999999999999999999999999987 7788999999999976
Q ss_pred ccccCCCcceEEEcCCCccc--ChhHHHH----------HHHHHHHHHHHHhcc---ccccchhHHHHHHhhhc------
Q 010995 86 CFSDYTNARYNIYDRSGKII--PSGVAAD----------SYKKAVESAIANLKN---LEATNSNIGEVIKAATE------ 144 (496)
Q Consensus 86 ~~~~~~~~~~~~~~~~g~~~--~~~~~~~----------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~------ 144 (496)
...........++..+|..+ +...... .+....+.+...... ......++.+|+.....
T Consensus 88 ~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ 167 (504)
T 1sez_A 88 KQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQMLLEPILWKNKKLSQVSDSHESVSGFFQRHFGKEVVDY 167 (504)
T ss_dssp GEECCSSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHHHHHHTHHHHC----------CCCBHHHHHHHHHCHHHHHT
T ss_pred cceeccCCCceEEEECCeEEECCCCHHHHhccccCCHHHHHHHhHhhhccCcccccccCCCCccHHHHHHHHcCHHHHHH
Confidence 54211111122344566543 2211110 011111111000000 01112334444432110
Q ss_pred ----CC--CCCCChHHHHHHHHHhh---ccc--cc-c-----CCcccc-----------cccCCcceeeeCcccHHHHHH
Q 010995 145 ----LP--SSPKTPLELAIDFILHD---FEM--AE-V-----EPISTY-----------VDFGEREFLVADERGYAHLLY 196 (496)
Q Consensus 145 ----~~--~~~~~~~~~~~~~~~~~---~~~--~~-~-----~~~~~~-----------~~~~~~~~~~~~~~G~~~l~~ 196 (496)
+. ....++.+++..+.... ++. .. . ..+... ...........+++|++.|++
T Consensus 168 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~ 247 (504)
T 1sez_A 168 LIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTD 247 (504)
T ss_dssp THHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTHHHHH
T ss_pred HHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHHHHHHH
Confidence 00 00011111111111000 000 00 0 000000 000001123456899999999
Q ss_pred HHHHhhccCCCCCccc-cceeeCceeEEEEEcCCc------eEEEeC--CC---cEEEcCEEEEecChHHHhcCCcc-cC
Q 010995 197 KMAEEFLSTSDGKILD-NRLKLNKVVRELQHSRNG------VTVKTE--DG---CVYEANYVILSASIGVLQSDLIS-FK 263 (496)
Q Consensus 197 ~l~~~~~~~~~~~~~g-~~i~~~~~V~~I~~~~~~------v~V~~~--~G---~~~~ad~VI~A~p~~~l~~~li~-~~ 263 (496)
+|++.+ + ++|++|++|++|..++++ +.|++. +| ++++||+||+|+|+..+.+.+.. ..
T Consensus 248 ~l~~~l---------~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~ 318 (504)
T 1sez_A 248 AICKDL---------REDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRG 318 (504)
T ss_dssp HHHTTS---------CTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSS
T ss_pred HHHhhc---------ccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccC
Confidence 999874 4 789999999999988777 666654 45 57899999999999999983210 11
Q ss_pred CCCcHHHHHHHhhCCCcceeEEEEEcCCCCCCCCC-CCceEEeecCC----CCcccccee--ccc-cCCCCcEEEEEecc
Q 010995 264 PPLPKWKTEAIEKCDVMVYTKIFLKFPCKFWPCSP-GKEFFIYAHER----RGYYTFWQH--MEN-AYPGSNILVVTLTN 335 (496)
Q Consensus 264 p~l~~~~~~~i~~~~~~~~~~v~l~~~~~~w~~~~-~~~~~~~~~~~----~~~~~~~~~--~~~-~~~~~~vl~~~~~~ 335 (496)
+++++.. +..+++.++.+|++.|++++|+... ++.+++...+. .....+|.+ ++. .+++..++++++.+
T Consensus 319 ~~~~~~~---l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g 395 (504)
T 1sez_A 319 NPFLLNF---IPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVYLYTTFVGG 395 (504)
T ss_dssp SBCCCTT---SCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGGSCTTEEEEEEEEES
T ss_pred CcccHHH---HhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEeeccccCCcCCCCCEEEEEEeCC
Confidence 2333221 5678888999999999999997532 33333322221 111122221 122 23345566677766
Q ss_pred ccchhcccCCcHHHHHHHHHHHHHhcCCCCCCCCeeEecccCCCCCCCcccCCCCCCCChH--HHHHHhCCCCcEEEccc
Q 010995 336 GESKRVEAQPDEETLKEAMEVLQDMFGPDIPNATDILVPRWWNNRFQRGSYSNYPIISDNQ--LVNSIRAPVAGIFFTGE 413 (496)
Q Consensus 336 ~~a~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~rw~~~~~~~g~~~~~~~g~~~~--~~~~~~~p~~~l~~aGd 413 (496)
..+..|..++++|+++.++++|+++++.. .+|.++.+.+|.+ +++.+.+|+... ......+|++||||||+
T Consensus 396 ~~~~~~~~~~~ee~~~~v~~~L~~~~g~~-~~p~~~~~~~w~~------~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~ 468 (504)
T 1sez_A 396 SRNRELAKASRTELKEIVTSDLKQLLGAE-GEPTYVNHLYWSK------AFPLYGHNYDSVLDAIDKMEKNLPGLFYAGN 468 (504)
T ss_dssp TTCGGGTTCCHHHHHHHHHHHHHHHHCBC-SCCSSEEEEEEEE------EEECCCTTHHHHHHHHHHHHHHSTTEEECCS
T ss_pred CCcccccCCCHHHHHHHHHHHHHHHhCCC-CCCeEEEEeECCC------CCCccCcCHHHHHHHHHHHHHhCCCEEEEee
Confidence 66777888999999999999999999863 4688889999976 677777776321 12345567899999999
Q ss_pred cccCcCCccchHHHHHHHHHHHHHHHHHhcc
Q 010995 414 HTSERFNGYVHGGYLAGIDTGKAVVEKIRKD 444 (496)
Q Consensus 414 ~~~~~~~g~~egA~~SG~~aA~~il~~l~~~ 444 (496)
+++. .+++||+.||.+||++|++.++..
T Consensus 469 ~~~g---~~v~gai~sG~~aA~~il~~l~~~ 496 (504)
T 1sez_A 469 HRGG---LSVGKALSSGCNAADLVISYLESV 496 (504)
T ss_dssp SSSC---SSHHHHHHHHHHHHHHHHHHHSSC
T ss_pred cCCC---CCHHHHHHHHHHHHHHHHHHHhhc
Confidence 9863 589999999999999999988654
No 16
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=100.00 E-value=2.1e-38 Score=329.16 Aligned_cols=424 Identities=15% Similarity=0.167 Sum_probs=265.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCC--------CCcEEEEeeCC-CC----------------CeEEEeeee-------CC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENG--------IEDILILEASD-RI----------------GGRVRNEKF-------GG 53 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G--------~~~V~vlEa~~-~~----------------GGr~~t~~~-------~g 53 (496)
+++|+|||||++||+||+.|+++| + +|+|||+++ ++ |||+.+... ++
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~-~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~~~~~~~~~ 134 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGI-DVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAALVHNGDPASGD 134 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEE-EEEEECCCTTBGGGCC----CEECTTCEETTEEEEEECSSCGGGCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCc-eEEEEeccCcccccccchhhHHHhcCcCCceEEEEEccCCcccCCC
Confidence 468999999999999999999999 8 799999999 99 999999877 45
Q ss_pred cEEeecceEEecCCCCCCChHHHHHHhc-CCccccccCC---CcceEE------EcCCCcc-cC----hhHHHHHHHHHH
Q 010995 54 VSVELGAGWIAGVGGKESNPVWELASKS-GLRTCFSDYT---NARYNI------YDRSGKI-IP----SGVAADSYKKAV 118 (496)
Q Consensus 54 ~~~d~G~~~~~~~~~~~~~~~~~l~~~l-gl~~~~~~~~---~~~~~~------~~~~g~~-~~----~~~~~~~~~~~~ 118 (496)
..+|.|+++++. .+..++++++++ |+......+. .....+ ...+|.. .. .......+....
T Consensus 135 ~~~e~G~~~~~~----~~~~~~~~~~~l~gl~~~~~~~~~~~~~~~~i~~~~~i~~~~g~~~~~~~~~~~p~p~~~~~v~ 210 (721)
T 3ayj_A 135 TIYEVGAMRFPE----IAGLTWHYASAAFGDAAPIKVFPNPGKVPTEFVFGNRVDRYVGSDPKDWEDPDSPTLKVLGVVA 210 (721)
T ss_dssp EEEECSCCCEET----TCHHHHHHHHHHHCTTCBCCBCCCBTTBCEEEEETTEEEEESSSCGGGBSSTTCHHHHHHHHHH
T ss_pred cEEecCCEEecC----ccHHHHHHHHHhcCCcccccccccCCCCceEEEecCceeeecCccceecccccccCHHHHHHHH
Confidence 899999999987 778889999999 9963211111 111212 0223332 11 110111121111
Q ss_pred HHHHH----------------------Hhcc----------------------ccccch--hH-----HHHHHhhhc--C
Q 010995 119 ESAIA----------------------NLKN----------------------LEATNS--NI-----GEVIKAATE--L 145 (496)
Q Consensus 119 ~~~~~----------------------~~~~----------------------~~~~~~--~~-----~~~~~~~~~--~ 145 (496)
..+.. .+.. .+.... .. .++....++ .
T Consensus 211 ~~~~~~~~e~~~~~~~~~~~~p~~v~~ll~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~w~~lla~~~d~~S~~~~~ 290 (721)
T 3ayj_A 211 GGLVGNPQGENVAMYPIANVDPAKIAAILNAATPPADALERIQTKYWPEFIAQYDGLTLGAAVREIVTVAFEKGTLPPVD 290 (721)
T ss_dssp HHHTCCSSSSCCCSSCBTTBCHHHHHHHHTCSSCCHHHHHHHHHTHHHHHHHHHTTBBHHHHHHHHHHHHHHHTSSCCGG
T ss_pred HHHHHHhhhcccccccccccchhhHHHHHHhhhcchhhhhhhhhhhhhhhhhhhccchhhhHHHHHHHHhhcccchhHHH
Confidence 11000 0000 000000 00 111111000 0
Q ss_pred CCCCC-ChHHHHHHHHHhhcc-----ccccCCcccc-----cccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccc
Q 010995 146 PSSPK-TPLELAIDFILHDFE-----MAEVEPISTY-----VDFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNR 214 (496)
Q Consensus 146 ~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~-----~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~ 214 (496)
.+... .......+.+. .+. .......+.. ...+.......+.||++.|+++|++.+. .|++
T Consensus 291 ~~L~~~~~~s~~~~~~~-~~~~~~gg~~~~~~~S~le~L~~~~~~~~~~~~~i~GG~~~L~~aLa~~l~-------~g~~ 362 (721)
T 3ayj_A 291 GVLDVDESISYYVELFG-RFGFGTGGFKPLYNISLVEMMRLILWDYSNEYTLPVTENVEFIRNLFLKAQ-------NVGA 362 (721)
T ss_dssp GTSCHHHHHHHHHHHHH-HHCSSSSCCGGGTTBBHHHHHHHHHTTTTCEECCSSSSTHHHHHHHHHHHH-------HHTT
T ss_pred HHHHhccccHHHHHHHH-HHhhccCCCCCccchhHHHHHHHHhcCCccceeEECCcHHHHHHHHHHhcc-------cCCc
Confidence 00000 00000011111 011 0000011000 0011122345678999999999999953 1678
Q ss_pred eeeCceeE--EEEEcCCc-------eEE-EeCCCc--EEEcCEEEEecChHHHhc----CCcc-------c---------
Q 010995 215 LKLNKVVR--ELQHSRNG-------VTV-KTEDGC--VYEANYVILSASIGVLQS----DLIS-------F--------- 262 (496)
Q Consensus 215 i~~~~~V~--~I~~~~~~-------v~V-~~~~G~--~~~ad~VI~A~p~~~l~~----~li~-------~--------- 262 (496)
|++|++|+ +|.+++++ |+| .+.+|+ +++||+||+|+|++.+.. ..|. +
T Consensus 363 I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~ 442 (721)
T 3ayj_A 363 GKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLETH 442 (721)
T ss_dssp TSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGTCCCE
T ss_pred eEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHhhccccccccccccccccccccccccc
Confidence 99999999 99987554 888 456676 789999999999999952 1244 2
Q ss_pred -----CCC-C-c-------HHHHHHHhhCCCcceeEEEEEc-----CCCCCCCCCCC-ceEEeecCCCCccccce---ec
Q 010995 263 -----KPP-L-P-------KWKTEAIEKCDVMVYTKIFLKF-----PCKFWPCSPGK-EFFIYAHERRGYYTFWQ---HM 319 (496)
Q Consensus 263 -----~p~-l-~-------~~~~~~i~~~~~~~~~~v~l~~-----~~~~w~~~~~~-~~~~~~~~~~~~~~~~~---~~ 319 (496)
.|+ | | ..+.+++++++|++..||++.| +++||++..+. ....+++. +.-.++. ..
T Consensus 443 ~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~g~~i~~s~TD~--~~r~~~~~p~p~ 520 (721)
T 3ayj_A 443 TYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQWRGEPIKAVVSDS--GLAASYVVPSPI 520 (721)
T ss_dssp EEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEETTEECCEEEETT--TTEEEEEEECSC
T ss_pred cccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccccCCCCceeeecCC--CcceEEEeccCc
Confidence 344 6 8 8899999999999999999999 99999874211 11233332 2111111 00
Q ss_pred --cccCCCCcEEE-EEeccccchhc------ccCCcHHH-------HHHHHHHHH--HhcCCCC-----------C--CC
Q 010995 320 --ENAYPGSNILV-VTLTNGESKRV------EAQPDEET-------LKEAMEVLQ--DMFGPDI-----------P--NA 368 (496)
Q Consensus 320 --~~~~~~~~vl~-~~~~~~~a~~~------~~~~~ee~-------~~~~~~~L~--~~~~~~~-----------~--~~ 368 (496)
+..+++.++++ .+..++++..| ..++++|. ++.++++|+ ++++... . .+
T Consensus 521 ~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p~~~~~~~~~~~~l~~~~~~ 600 (721)
T 3ayj_A 521 VEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYAGASNAQPWWFYQLLAEART 600 (721)
T ss_dssp C----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCEECCTTCSSCEECHHHHHHHTSCS
T ss_pred ccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhhccCccccccccchhhhhhhhccc
Confidence 12234445555 45557778887 55666665 999999999 8886321 1 13
Q ss_pred CeeEecccCCCCCCCcccCCCCCCCChH---HHH-----HHhCCCCcEEEccccccCcCCccchHHHHHHHHHHHHHHHH
Q 010995 369 TDILVPRWWNNRFQRGSYSNYPIISDNQ---LVN-----SIRAPVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVEK 440 (496)
Q Consensus 369 ~~~~~~rw~~~~~~~g~~~~~~~g~~~~---~~~-----~~~~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~~ 440 (496)
.+...++|.++| +.|+|..+.||+..+ +.+ .+.+|.++||||||+++. ++||+|||+.||++||..|+..
T Consensus 601 ~~~~~~dW~~dp-s~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~~S~-~~GWieGAl~Sa~~Aa~~i~~~ 678 (721)
T 3ayj_A 601 ADRFVFDWTTNK-TAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDSYSH-LGGWLEGAFMSALNAVAGLIVR 678 (721)
T ss_dssp TTCEEEEGGGST-TSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGGGSS-CTTSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCC-CCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehhhcc-CCceehHHHHHHHHHHHHHHHH
Confidence 567899999999 999999999998321 111 234567999999999986 7899999999999999999999
Q ss_pred Hhcccc
Q 010995 441 IRKDNE 446 (496)
Q Consensus 441 l~~~~~ 446 (496)
++....
T Consensus 679 ~~~~~~ 684 (721)
T 3ayj_A 679 ANRGDV 684 (721)
T ss_dssp HTTTCG
T ss_pred hcCCCC
Confidence 987655
No 17
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=4.3e-37 Score=314.82 Aligned_cols=411 Identities=18% Similarity=0.182 Sum_probs=255.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCC-cEEEEeeCCCCCeEEEeeee-CCcEEeecceEEecCCCCCCChHHHHHHhcCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIE-DILILEASDRIGGRVRNEKF-GGVSVELGAGWIAGVGGKESNPVWELASKSGL 83 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~-~V~vlEa~~~~GGr~~t~~~-~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl 83 (496)
++||+|||||++||+||++|+++|.. +|+|||+++++||+++|... +|+.+|.|++++...+ ..+..+.++++++|+
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~-~~~~~~~~l~~~lgl 80 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAG-ALGARTLLLVSELGL 80 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCH-HHHHHHHHHHHHTTC
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCC-cccHHHHHHHHHcCC
Confidence 47999999999999999999999982 39999999999999999775 5899999999986500 025668899999999
Q ss_pred ccccccCCC----cceEEEcCCCccc--ChhH---HHH--HHH--HHHHHHHHHhc-cccccchhHHHHHHhhhc-----
Q 010995 84 RTCFSDYTN----ARYNIYDRSGKII--PSGV---AAD--SYK--KAVESAIANLK-NLEATNSNIGEVIKAATE----- 144 (496)
Q Consensus 84 ~~~~~~~~~----~~~~~~~~~g~~~--~~~~---~~~--~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----- 144 (496)
......... ....+...+|... |... ... .+. ........... .......++.+|+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~~~ 160 (477)
T 3nks_A 81 DSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVAS 160 (477)
T ss_dssp GGGEEEECTTSHHHHCEEEEETTEEEECCCSSCC---CCTTSCSCSSHHHHTTTTSCCCCSSCCBHHHHHHHHHCHHHHH
T ss_pred cceeeecCCCCchhcceEEEECCEEEECCCChhhcccccchhhhHHHHHHHHhhhcCCCCCCCcCHHHHHHHhhCHHHHH
Confidence 855432110 0011222344332 1100 000 000 00000000000 001111223333332100
Q ss_pred -C--C----CCCCChHHHHHHHHHhhc---c--cccc--------C-----Cccccc-ccCCcceeeeCcccHHHHHHHH
Q 010995 145 -L--P----SSPKTPLELAIDFILHDF---E--MAEV--------E-----PISTYV-DFGEREFLVADERGYAHLLYKM 198 (496)
Q Consensus 145 -~--~----~~~~~~~~~~~~~~~~~~---~--~~~~--------~-----~~~~~~-~~~~~~~~~~~~~G~~~l~~~l 198 (496)
+ + ....++.+++..+....+ + .... . ....+. .......+..+++|++.++++|
T Consensus 161 ~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l 240 (477)
T 3nks_A 161 LAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQAL 240 (477)
T ss_dssp HTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCTTHHHHHH
T ss_pred HHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCHHHHHHHH
Confidence 0 0 000000000000000000 0 0000 0 000000 0000112456689999999999
Q ss_pred HHhhccCCCCCccccceeeCceeEEEEEcCCc-eEEEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhC
Q 010995 199 AEEFLSTSDGKILDNRLKLNKVVRELQHSRNG-VTVKTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKC 277 (496)
Q Consensus 199 ~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~ 277 (496)
++.+.+ .|++|++|++|++|+.++++ +.|++.+ .++.||+||+|+|+..+.++ .+++++...+.+..+
T Consensus 241 ~~~l~~------~g~~i~~~~~V~~i~~~~~~~~~v~~~~-~~~~ad~vv~a~p~~~~~~l----l~~~~~~~~~~l~~~ 309 (477)
T 3nks_A 241 ETHLTS------RGVSVLRGQPVCGLSLQAEGRWKVSLRD-SSLEADHVISAIPASVLSEL----LPAEAAPLARALSAI 309 (477)
T ss_dssp HHHHHH------TTCEEECSCCCCEEEECGGGCEEEECSS-CEEEESEEEECSCHHHHHHH----SCGGGHHHHHHHHTC
T ss_pred HHHHHh------cCCEEEeCCEEEEEEEcCCceEEEEECC-eEEEcCEEEECCCHHHHHHh----ccccCHHHHHHHhcC
Confidence 999877 69999999999999998777 8887754 58999999999999999872 233445677888999
Q ss_pred CCcceeEEEEEcCCCCCCCCCCCceEEeecCCCC-cccccee--cc--ccCCCCcEEEEEeccccchhcc----cCCcHH
Q 010995 278 DVMVYTKIFLKFPCKFWPCSPGKEFFIYAHERRG-YYTFWQH--ME--NAYPGSNILVVTLTNGESKRVE----AQPDEE 348 (496)
Q Consensus 278 ~~~~~~~v~l~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~--~~--~~~~~~~vl~~~~~~~~a~~~~----~~~~ee 348 (496)
++.++.+|++.|++++|+. .++++++...+... ...+|.+ +. ..+++..++.+++.+..+..+. .+++++
T Consensus 310 ~~~~~~~v~l~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~~~~~~ 388 (477)
T 3nks_A 310 TAVSVAVVNLQYQGAHLPV-QGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQEL 388 (477)
T ss_dssp CEEEEEEEEEEETTCCCSS-CSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHSSCCCCHHH
T ss_pred CCCcEEEEEEEECCCCCCC-CCceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCccccccccccCCCCHHH
Confidence 9999999999999999964 24455544332222 1122332 11 1134566777777655444442 468999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCeeEecccCCCCCCCcccCCCCCCCChHHHH----HHhCCCCcEEEccccccCcCCccch
Q 010995 349 TLKEAMEVLQDMFGPDIPNATDILVPRWWNNRFQRGSYSNYPIISDNQLVN----SIRAPVAGIFFTGEHTSERFNGYVH 424 (496)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~~~~~~~~~rw~~~~~~~g~~~~~~~g~~~~~~~----~~~~p~~~l~~aGd~~~~~~~g~~e 424 (496)
+++.++++|.+++|.. +++....+++|.+ +++.+.+|+. .... .+.+..++|++||+|+.. .+++
T Consensus 389 ~~~~~~~~L~~~~g~~-~~~~~~~v~rw~~------a~p~~~~g~~-~~~~~~~~~l~~~~~~l~l~G~~~~G---~gv~ 457 (477)
T 3nks_A 389 FQQRAQEAAATQLGLK-EMPSHCLVHLHKN------CIPQYTLGHW-QKLESARQFLTAHRLPLTLAGASYEG---VAVN 457 (477)
T ss_dssp HHHHHHHHHHHHHCCC-SCCSEEEEEEEEE------EEECCBTTHH-HHHHHHHHHHHHTTCSEEECSTTTSC---CSHH
T ss_pred HHHHHHHHHHHHhCCC-CCCcEEEEEEcCC------ccCCCCCCHH-HHHHHHHHHHHhcCCCEEEEccCCCC---CcHH
Confidence 9999999999999864 5788889999976 8888999874 3222 233334689999999854 3699
Q ss_pred HHHHHHHHHHHHHHHH
Q 010995 425 GGYLAGIDTGKAVVEK 440 (496)
Q Consensus 425 gA~~SG~~aA~~il~~ 440 (496)
+|+.||.+||++|+..
T Consensus 458 ~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 458 DCIESGRQAAVSVLGT 473 (477)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999864
No 18
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=100.00 E-value=1.9e-36 Score=313.01 Aligned_cols=408 Identities=12% Similarity=0.136 Sum_probs=248.9
Q ss_pred CCCC-CCCCEEEECCCHHHHHHHHHHHHC-CCCcEEEEeeCCCCCeEEEee-eeCCcEEeecceEEecCCCCCCChHHHH
Q 010995 1 MDST-SRSPVIIIGAGVSGISAGKILAEN-GIEDILILEASDRIGGRVRNE-KFGGVSVELGAGWIAGVGGKESNPVWEL 77 (496)
Q Consensus 1 m~~~-~~~dVvIIGaGiaGL~aA~~L~~~-G~~~V~vlEa~~~~GGr~~t~-~~~g~~~d~G~~~~~~~~~~~~~~~~~l 77 (496)
|+.+ .++||||||||+|||+||++|+++ |+ +|+|||+++++||+++|. ..+|+.+|.|+|+|+. .++.++++
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~~G~-~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~----~~~~v~~l 78 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQIDGP-SWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFS----HYKYFDDC 78 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHHCCS-CEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCC----CBHHHHHH
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhhCCC-CEEEEECCCCCcCCeeeEEecCCEEEEeCceEecC----CCHHHHHH
Confidence 4443 357999999999999999999985 99 699999999999999995 4689999999999987 78899999
Q ss_pred HHhcCCcccc-ccCCCcceEEEcCCCcccChhH-----------HHHHHHHHHHHHHH-HhccccccchhHHHHHHhhh-
Q 010995 78 ASKSGLRTCF-SDYTNARYNIYDRSGKIIPSGV-----------AADSYKKAVESAIA-NLKNLEATNSNIGEVIKAAT- 143 (496)
Q Consensus 78 ~~~lgl~~~~-~~~~~~~~~~~~~~g~~~~~~~-----------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 143 (496)
+++++..... ...... . ....+|+.++.+. .............. .....++. ++.+|+....
T Consensus 79 ~~e~~~~~~~~~~~~~~-~-~i~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~g 154 (513)
T 4gde_A 79 LDEALPKEDDWYTHQRI-S-YVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPK--TFDEWIVRMMG 154 (513)
T ss_dssp HHHHSCSGGGEEEEECC-E-EEEETTEEEESSGGGGGGGSCHHHHHHHHHHHHHHHHHHHTCCSCCC--SHHHHHHHHHH
T ss_pred HHHhCCccceeEEecCc-e-EEEECCeEeecchhhhhhhcchhhHHHHHHHHHHHHHhhhccccccc--CHHHHHHHhhh
Confidence 9998765432 111121 2 2224555433211 11111111111111 11111222 2222222100
Q ss_pred ----cCCC-------CCCChHHHHHHHHHhhccccccC--------CcccccccCCcceeeeCcccHHHHHHHHHHhhcc
Q 010995 144 ----ELPS-------SPKTPLELAIDFILHDFEMAEVE--------PISTYVDFGEREFLVADERGYAHLLYKMAEEFLS 204 (496)
Q Consensus 144 ----~~~~-------~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~ 204 (496)
.... ...++.++..++....+...... .................++|++.++++|++.+.+
T Consensus 155 ~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~ 234 (513)
T 4gde_A 155 TGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPK 234 (513)
T ss_dssp HHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHHHHHHHHHHTSCG
T ss_pred hhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHHHHHHHHHHHHHh
Confidence 0000 00000000000000000000000 0000000111223445689999999999999887
Q ss_pred CCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeE
Q 010995 205 TSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTK 284 (496)
Q Consensus 205 ~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~ 284 (496)
.|++|++|++|++|..++++ |++.+|+++.||+||+|+|+..+.+. + + +....++...++|.+...
T Consensus 235 ------~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~~l~~~-l---~--~~~~~~~~~~l~y~~~~~ 300 (513)
T 4gde_A 235 ------EKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVDFLAEA-M---N--DQELVGLTKQLFYSSTHV 300 (513)
T ss_dssp ------GGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHHHHHHH-T---T--CHHHHHHHTTCCEEEEEE
T ss_pred ------cCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHHHHHHh-c---C--chhhHhhhhcccCCceEE
Confidence 79999999999999988765 45678999999999999999999872 2 1 234567778899999999
Q ss_pred EEEEcCCCCCCCCCCCceEEeecCCCCcccc--ceecc-----------------------ccCCCCcEEEEEeccccch
Q 010995 285 IFLKFPCKFWPCSPGKEFFIYAHERRGYYTF--WQHME-----------------------NAYPGSNILVVTLTNGESK 339 (496)
Q Consensus 285 v~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~~~-----------------------~~~~~~~vl~~~~~~~~a~ 339 (496)
|.+.++...........++.+.+....+..+ +.++. ...++...+..++.+....
T Consensus 301 v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (513)
T 4gde_A 301 IGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSES 380 (513)
T ss_dssp EEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEEEB
T ss_pred EEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEecccch
Confidence 9998876644332111222222221111111 00000 0011122333333333345
Q ss_pred hcccCCcHHHHHHHHHHHHHhcCCCC-CCCCeeEecccCCCCCCCcccCCCCCCCChH---HHHHHhCCCCcEEEccccc
Q 010995 340 RVEAQPDEETLKEAMEVLQDMFGPDI-PNATDILVPRWWNNRFQRGSYSNYPIISDNQ---LVNSIRAPVAGIFFTGEHT 415 (496)
Q Consensus 340 ~~~~~~~ee~~~~~~~~L~~~~~~~~-~~~~~~~~~rw~~~~~~~g~~~~~~~g~~~~---~~~~~~~p~~~l~~aGd~~ 415 (496)
.+..++++++++.++++|.++.+... +++++..+.||.+ +|+.+..|+... .++.+.. .|||++|..-
T Consensus 381 ~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~------ayP~y~~~~~~~~~~~~~~l~~--~~l~~~GR~g 452 (513)
T 4gde_A 381 SMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDH------GYPTPTLEREGTLTQILPKLQD--KDIWSRGRFG 452 (513)
T ss_dssp TTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEE------EEECCBTTHHHHHHHHHHHHHH--TTEEECSTTT
T ss_pred hccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCC------eecccCHhHHHHHHHHHHHHhh--cCcEEecCCc
Confidence 56778999999999999999987543 4567888999976 899888887422 3444444 5999999877
Q ss_pred cCcCC-ccchHHHHHHHHHHHHHHH
Q 010995 416 SERFN-GYVHGGYLAGIDTGKAVVE 439 (496)
Q Consensus 416 ~~~~~-g~~egA~~SG~~aA~~il~ 439 (496)
...|. ++|++|+.||++||+.|+.
T Consensus 453 ~~~Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 453 SWRYEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp TCCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred ccCcCCCCHHHHHHHHHHHHHHHHc
Confidence 66554 5899999999999999996
No 19
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=297.75 Aligned_cols=325 Identities=12% Similarity=0.147 Sum_probs=228.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHH---CCCCcEEEEeeCCCCCeEEEeeee---CCcEEeecceEEecCCCCCCC---hHHH
Q 010995 6 RSPVIIIGAGVSGISAGKILAE---NGIEDILILEASDRIGGRVRNEKF---GGVSVELGAGWIAGVGGKESN---PVWE 76 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~---~G~~~V~vlEa~~~~GGr~~t~~~---~g~~~d~G~~~~~~~~~~~~~---~~~~ 76 (496)
++||+|||||++||+||+.|++ +|+ +|+|||+++.+||++.+.+. .+..+|.|+.++.. ... .+.+
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~-~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~----~~~~~~~~~~ 75 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPL-YLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITC----TPHYAKKHQR 75 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCE-EEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEE----CSSHHHHTHH
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCc-eEEEEECCCCCccceeeeecCCCCCceEecCCceEEc----CchHHHHHHH
Confidence 3689999999999999999999 999 79999999999999888664 35678888887765 322 2222
Q ss_pred HHHhc---CCccccccCCCcceEEEcCCCcccChhHHHHHHHHHHHHHHHHhccccccchhHHHHHHhhhcCCCCCCChH
Q 010995 77 LASKS---GLRTCFSDYTNARYNIYDRSGKIIPSGVAADSYKKAVESAIANLKNLEATNSNIGEVIKAATELPSSPKTPL 153 (496)
Q Consensus 77 l~~~l---gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (496)
+++++ |+.. .+... . .+
T Consensus 76 ~~~~~~~~g~~~---~~~~~---~---~~--------------------------------------------------- 95 (342)
T 3qj4_A 76 FYDELLAYGVLR---PLSSP---I---EG--------------------------------------------------- 95 (342)
T ss_dssp HHHHHHHTTSCE---ECCSC---E---ET---------------------------------------------------
T ss_pred HHHHHHhCCCee---cCchh---h---cc---------------------------------------------------
Confidence 22221 1100 00000 0 00
Q ss_pred HHHHHHHHhhccccccCCcccccccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEE
Q 010995 154 ELAIDFILHDFEMAEVEPISTYVDFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTV 233 (496)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V 233 (496)
...... ...+...+|++.++++|++. .|++|+++++|++|+.++++|+|
T Consensus 96 ---------------------~~~~~~-~~~~~~~~g~~~l~~~l~~~---------~g~~i~~~~~V~~i~~~~~~~~v 144 (342)
T 3qj4_A 96 ---------------------MVMKEG-DCNFVAPQGISSIIKHYLKE---------SGAEVYFRHRVTQINLRDDKWEV 144 (342)
T ss_dssp ---------------------CCC--C-CEEEECTTCTTHHHHHHHHH---------HTCEEESSCCEEEEEECSSSEEE
T ss_pred ---------------------eeccCC-ccceecCCCHHHHHHHHHHh---------cCCEEEeCCEEEEEEEcCCEEEE
Confidence 000000 11234478999999999988 57899999999999999999999
Q ss_pred EeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEEEcCCCCCCCCCCCceEEeecCCCCcc
Q 010995 234 KTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFLKFPCKFWPCSPGKEFFIYAHERRGYY 313 (496)
Q Consensus 234 ~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 313 (496)
++.+|++++||+||+|+|+..+.+++-.+.|.||+...+.++.++|.++.+|++.|++++|.+.+..++++. +.....+
T Consensus 145 ~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~-~~~~~~~ 223 (342)
T 3qj4_A 145 SKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYIT-SNPCIRF 223 (342)
T ss_dssp EESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECS-SCSSEEE
T ss_pred EECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHHhcCCccccEEEEEEECCCCccCCceeeEEcc-CCcceEE
Confidence 998887789999999999999988332345668888889999999999999999999988876443444332 1111111
Q ss_pred ccceecccc---CCCCcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCCCCCCCCeeEecccCCCCCCCcccCCCC
Q 010995 314 TFWQHMENA---YPGSNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGPDIPNATDILVPRWWNNRFQRGSYSNYP 390 (496)
Q Consensus 314 ~~~~~~~~~---~~~~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~rw~~~~~~~g~~~~~~ 390 (496)
..+++.... .++..+++....+..+..+.+++++++++.++++|.+++| ..++|..+.++||.. +.+.+.
T Consensus 224 ~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-~~~~p~~~~v~rW~~------a~p~~~ 296 (342)
T 3qj4_A 224 VSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILP-GLPQPIATKCQKWRH------SQVTNA 296 (342)
T ss_dssp EEEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHHHSC-SCCCCSEEEEEEETT------CSBSSC
T ss_pred EEccccCCCCCCCCCCceEEEECCHHHHHHhhcCCHHHHHHHHHHHHHHhcc-CCCCCceeeeccccc------cccccc
Confidence 112221111 1234577777776677778889999999999999999998 456789999999975 333332
Q ss_pred CCCChHHHHHHh-CCCCcEEEccccccCcCCccchHHHHHHHHHHHHHHHH
Q 010995 391 IISDNQLVNSIR-APVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVEK 440 (496)
Q Consensus 391 ~g~~~~~~~~~~-~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~~ 440 (496)
.... ...+. .+.++|++||||+.. +++|+|+.||.+||++|++.
T Consensus 297 ~~~~---~~~~~~~~~~~l~laGd~~~g---~~v~~ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 297 AANC---PGQMTLHHKPFLACGGDGFTQ---SNFDGCITSALCVLEALKNY 341 (342)
T ss_dssp CSSS---CSCEEEETTTEEEECSGGGSC---SSHHHHHHHHHHHHHHHTTC
T ss_pred cCCC---cceeEecCCccEEEEccccCC---CCccHHHHHHHHHHHHHHhh
Confidence 1100 00112 355899999999965 68999999999999999764
No 20
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=9.7e-36 Score=300.23 Aligned_cols=394 Identities=14% Similarity=0.111 Sum_probs=248.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCCccc
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGLRTC 86 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl~~~ 86 (496)
+||+|||||++||+||++|+++|+ +|+|||+++++||++.+...+|+.+|.|++++... ..++.+.++++++|+...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~-~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~--~~~~~~~~l~~~lg~~~~ 77 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGH-EVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPN--GPGGPLACFLKEVEASVN 77 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTT--GGGSHHHHHHHHTTCCCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCC-ceEEEeCCCCCCCceeeeccCCcEEcCCCceEecC--CCccHHHHHHHHhCCCce
Confidence 489999999999999999999999 79999999999999999999999999998765431 145678999999998765
Q ss_pred cccCCCcceEEEc-CC--------CcccChhHHHH-----HHHHHHHHHHHHhccccccchhHHHHHHhhhcCCCCCCCh
Q 010995 87 FSDYTNARYNIYD-RS--------GKIIPSGVAAD-----SYKKAVESAIANLKNLEATNSNIGEVIKAATELPSSPKTP 152 (496)
Q Consensus 87 ~~~~~~~~~~~~~-~~--------g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (496)
....... ...+. .+ +..+....... ........... .........++.+++.... ....
T Consensus 78 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~l~~~~-----~~~~ 150 (425)
T 3ka7_A 78 IVRSEMT-TVRVPLKKGNPDYVKGFKDISFNDFPSLLSYKDRMKIALLIVS-TRKNRPSGSSLQAWIKSQV-----SDEW 150 (425)
T ss_dssp EEECCCC-EEEEESSTTCCSSTTCEEEEEGGGGGGGSCHHHHHHHHHHHHH-TTTSCCCSSBHHHHHHHHC-----CCHH
T ss_pred EEecCCc-eEEeecCCCcccccccccceehhhhhhhCCHHHHHHHHHHHHh-hhhcCCCCCCHHHHHHHhc-----CCHH
Confidence 4322211 11221 11 22211110000 00011111111 1101112233455554311 1111
Q ss_pred HHHHHHHHHhh-cc--ccccCC---c---ccccccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEE
Q 010995 153 LELAIDFILHD-FE--MAEVEP---I---STYVDFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRE 223 (496)
Q Consensus 153 ~~~~~~~~~~~-~~--~~~~~~---~---~~~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~ 223 (496)
.+...+.+... +. ...... . ......+. ....++|++.++++|++.+.+ .|++|++|++|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~---~~~~~gG~~~l~~~l~~~~~~------~G~~i~~~~~V~~ 221 (425)
T 3ka7_A 151 LIKFADSFCGWALSLKSDEVPVEEVFEIIENMYRFGG---TGIPEGGCKGIIDALETVISA------NGGKIHTGQEVSK 221 (425)
T ss_dssp HHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCS---CEEETTSHHHHHHHHHHHHHH------TTCEEECSCCEEE
T ss_pred HHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHhcCC---ccccCCCHHHHHHHHHHHHHH------cCCEEEECCceeE
Confidence 11111111100 00 000000 0 00001111 234578999999999999887 7999999999999
Q ss_pred EEEcCCceE-EEeCCCcEEEcCEEEEecChHHHhcCCcccCCCC--cHHHHHHHhhCCCcceeEEEEEcCCCCCCCCCCC
Q 010995 224 LQHSRNGVT-VKTEDGCVYEANYVILSASIGVLQSDLISFKPPL--PKWKTEAIEKCDVMVYTKIFLKFPCKFWPCSPGK 300 (496)
Q Consensus 224 I~~~~~~v~-V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l--~~~~~~~i~~~~~~~~~~v~l~~~~~~w~~~~~~ 300 (496)
|..++++++ |++. |++++||+||+|+|+..+.+ ++...+.+ +....+.++.+.+++..++++.|+++++..
T Consensus 222 i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~---- 295 (425)
T 3ka7_A 222 ILIENGKAAGIIAD-DRIHDADLVISNLGHAATAV-LCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGH---- 295 (425)
T ss_dssp EEEETTEEEEEEET-TEEEECSEEEECSCHHHHHH-HTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCS----
T ss_pred EEEECCEEEEEEEC-CEEEECCEEEECCCHHHHHH-hcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCc----
Confidence 999988887 7774 77899999999999999987 34333333 677788889999999999999999987643
Q ss_pred ceEEeecCCCCc-ccccee-cc--ccCCCCcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCCCCCCCCeeEeccc
Q 010995 301 EFFIYAHERRGY-YTFWQH-ME--NAYPGSNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGPDIPNATDILVPRW 376 (496)
Q Consensus 301 ~~~~~~~~~~~~-~~~~~~-~~--~~~~~~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~rw 376 (496)
..+.+..+.... ...+.+ .+ ..++|..++.+++.... + ..+. +++.++.++++|++++|.. .+....+++|
T Consensus 296 ~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~-~-~~~~-~~~~~~~~~~~l~~~~p~~--~~~~~~v~~~ 370 (425)
T 3ka7_A 296 TGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAP-E-NVKN-LESEIEMGLEDLKEIFPGK--RYEVLLIQSY 370 (425)
T ss_dssp SSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECG-G-GGGG-HHHHHHHHHHHHHHHSTTC--CEEEEEEEEE
T ss_pred CEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEecccc-c-cccc-hHHHHHHHHHHHHHhCCCC--ceEEEEEEEE
Confidence 222333222211 111221 11 23456666655544221 1 1112 2455799999999999642 3334478889
Q ss_pred CCCCCCCcccCCCCCCCChHHHHHHhCCCCcEEEccccccCcCCccchHHHHHHHHHHHHHH
Q 010995 377 WNNRFQRGSYSNYPIISDNQLVNSIRAPVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVV 438 (496)
Q Consensus 377 ~~~~~~~g~~~~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il 438 (496)
.. +++.+.+|. ..++...+|++|||+||||+.+.++.+|++|+.||++||++|+
T Consensus 371 ~~------~~P~~~~~~--~~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 371 HD------EWPVNRAAS--GTDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp BT------TBCSBSSCT--TCCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred CC------Ccccccccc--CCCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 65 778778775 2446667888999999999998655699999999999999886
No 21
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=1e-34 Score=298.99 Aligned_cols=423 Identities=16% Similarity=0.183 Sum_probs=199.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCCcc
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGLRT 85 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl~~ 85 (496)
|++|||||||++||+||++|+++|+ +|+|||+++++||+++|++.+|+.+|.|++++.. ...+.++++.+|...
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~-~V~VlEa~~~~GG~~~t~~~~G~~~D~G~~~~~~-----~~~~~~l~~~~g~~~ 74 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGI-PVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVITD-----PSAIEELFALAGKQL 74 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTC-CEEEECCC-------CEEEETTEEEECSCCCBSC-----THHHHHHHHTTTCCG
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCC-cEEEEccCCCCCCcEEEEEeCCEEEecCceeecC-----chhHHHHHHHhcchh
Confidence 5789999999999999999999999 6999999999999999999999999999998864 234567777777542
Q ss_pred cc-ccC--CCcceEEEcCCCcccCh----hHHHH-----------HHHHHHHHHHHHhccc----ccc-chhHHHHHHhh
Q 010995 86 CF-SDY--TNARYNIYDRSGKIIPS----GVAAD-----------SYKKAVESAIANLKNL----EAT-NSNIGEVIKAA 142 (496)
Q Consensus 86 ~~-~~~--~~~~~~~~~~~g~~~~~----~~~~~-----------~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~ 142 (496)
.. .++ .+..+.+...+|..+.. ..... .+.++.+......... ... .....++....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (501)
T 4dgk_A 75 KEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRAA 154 (501)
T ss_dssp GGTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CCCCCCCHHHHHHSG
T ss_pred hhceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhccccccchhhhhhhhh
Confidence 21 010 11223345566655331 11111 1112222211111110 000 00112221110
Q ss_pred hcC--------------CCCCCChHHHHHHHHHhhccccc--cCCccccc-ccCCcceeeeCcccHHHHHHHHHHhhccC
Q 010995 143 TEL--------------PSSPKTPLELAIDFILHDFEMAE--VEPISTYV-DFGEREFLVADERGYAHLLYKMAEEFLST 205 (496)
Q Consensus 143 ~~~--------------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~G~~~l~~~l~~~~~~~ 205 (496)
... .....+..+..+.+......... ......+. .........+++||++.|+++|++.+++
T Consensus 155 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p~~~~~~~~~~~~~~~~~G~~~p~GG~~~l~~aL~~~~~~- 233 (501)
T 4dgk_A 155 PQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPFATSSIYTLIHALEREWGVWFPRGGTGALVQGMIKLFQD- 233 (501)
T ss_dssp GGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC--CCCTHHHHHHHHSCCCEEEETTHHHHHHHHHHHHHHH-
T ss_pred hhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCcchhhhhhhhhhhhhccCCeEEeCCCCcchHHHHHHHHHH-
Confidence 000 00000011111111110000000 00000000 0001112235689999999999999988
Q ss_pred CCCCccccceeeCceeEEEEEcCCceE-EEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcc-ee
Q 010995 206 SDGKILDNRLKLNKVVRELQHSRNGVT-VKTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMV-YT 283 (496)
Q Consensus 206 ~~~~~~g~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~-~~ 283 (496)
.|++|++|++|++|..++++++ |++.+|+++.||+||+++++..+.+.++... +.+....+.++...++. ..
T Consensus 234 -----~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~-~~~~~~~~~~~~~~~~~s~~ 307 (501)
T 4dgk_A 234 -----LGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQH-PAAVKQSNKLQTKRMSNSLF 307 (501)
T ss_dssp -----TTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC----------------------------CCEEE
T ss_pred -----hCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhcccc-ccchhhhhhhhccccCCcee
Confidence 7999999999999999999987 9999999999999999999888765444322 23434455566666544 56
Q ss_pred EEEEEcCCCCCCCCCCCceEEeecCC------------C-Ccccccee----cc--ccCCCCcEEEEEeccccchhcccC
Q 010995 284 KIFLKFPCKFWPCSPGKEFFIYAHER------------R-GYYTFWQH----ME--NAYPGSNILVVTLTNGESKRVEAQ 344 (496)
Q Consensus 284 ~v~l~~~~~~w~~~~~~~~~~~~~~~------------~-~~~~~~~~----~~--~~~~~~~vl~~~~~~~~a~~~~~~ 344 (496)
++++.++.+..... ...+.+..+. . ....++.. .+ ..++|..++.++...+. ..+...
T Consensus 308 ~~~~~l~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~-~~~~~~ 384 (501)
T 4dgk_A 308 VLYFGLNHHHDQLA--HHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPH-LGTANL 384 (501)
T ss_dssp EEEEEESSCCTTSC--SEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECC-TTTSCC
T ss_pred EEEecccCCccccc--cceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCc-cccccc
Confidence 77888877642211 1111111100 0 00011111 11 23455555554433211 112222
Q ss_pred C----cHHHHHHHHHHHHHhcCCCCCC-CCeeEe---cccCCCCC-CCcccCCCCC--CCChHHHHHH-hCCCCcEEEcc
Q 010995 345 P----DEETLKEAMEVLQDMFGPDIPN-ATDILV---PRWWNNRF-QRGSYSNYPI--ISDNQLVNSI-RAPVAGIFFTG 412 (496)
Q Consensus 345 ~----~ee~~~~~~~~L~~~~~~~~~~-~~~~~~---~rw~~~~~-~~g~~~~~~~--g~~~~~~~~~-~~p~~~l~~aG 412 (496)
+ .+++.+++++.|++.+.+...+ ++...+ ..|.+... ..|++....+ .+....+|.. .+|++|||+||
T Consensus 385 ~~~~~~~~~~~~vl~~l~~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i~gLyl~G 464 (501)
T 4dgk_A 385 DWTVEGPKLRDRIFAYLEQHYMPGLRSQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTITNLYLVG 464 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCTTHHHHEEEEEEECTTTTC------------------------------CCTTEEECC
T ss_pred cHHHHHHHHHHHHHHHHHHhhCCChHHceEEEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCCCCEEEEC
Confidence 2 3566777888888766332221 111111 12222111 1333221211 1111234433 47899999999
Q ss_pred ccccCcCCccchHHHHHHHHHHHHHHHHHhcccc
Q 010995 413 EHTSERFNGYVHGGYLAGIDTGKAVVEKIRKDNE 446 (496)
Q Consensus 413 d~~~~~~~g~~egA~~SG~~aA~~il~~l~~~~~ 446 (496)
++++++ ++++||+.||..||++|+++|.++.+
T Consensus 465 ~~t~pG--~Gv~ga~~SG~~aA~~il~dL~gG~~ 496 (501)
T 4dgk_A 465 AGTHPG--AGIPGVIGSAKATAGLMLEDLIGGSH 496 (501)
T ss_dssp CH--------HHHHHHHHHHHHHHHHHHHC----
T ss_pred CCCCCc--ccHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 999763 57999999999999999999987765
No 22
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=4e-33 Score=280.60 Aligned_cols=382 Identities=16% Similarity=0.176 Sum_probs=230.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCCccc
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGLRTC 86 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl~~~ 86 (496)
.||+|||||++||+||++|+++|+ +|+|||+++++||++.+...+|+.+|.|++++... .....+.++++++|+...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~-~V~vlE~~~~~GG~~~~~~~~g~~~d~G~~~~~~~--~~~~~~~~l~~~lg~~~~ 77 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGH-EIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPH--GEDGPLAHLLRILGAKVE 77 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSSSCTTSSEEEETTEEEESSSCSEETT--TTSSHHHHHHHHHTCCCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCCCCceeEEeccCCEEEecCCeEEEcc--CCChHHHHHHHHhCCcce
Confidence 389999999999999999999999 79999999999999999999999999998766541 145688999999998755
Q ss_pred cccCCCcceEEEcCCCcccChhHHHHHH-----HHHHHHHHHHhc-cccccchhHHHHHHhhhcCCCCCCChHHHHHHHH
Q 010995 87 FSDYTNARYNIYDRSGKIIPSGVAADSY-----KKAVESAIANLK-NLEATNSNIGEVIKAATELPSSPKTPLELAIDFI 160 (496)
Q Consensus 87 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (496)
....... ..++ .+|..++.......+ ..+......... ..+....++.+++... .......+...+.+
T Consensus 78 ~~~~~~~-~~~~-~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~----g~~~~~~~~~~~~~ 151 (421)
T 3nrn_A 78 IVNSNPK-GKIL-WEGKIFHYRESWKFLSVKEKAKALKLLAEIRMNKLPKEEIPADEWIKEK----IGENEFLLSVLESF 151 (421)
T ss_dssp EEECSSS-CEEE-ETTEEEEGGGGGGGCC--------CCHHHHHTTCCCCCCSBHHHHHHHH----TCCCHHHHHHHHHH
T ss_pred EEECCCC-eEEE-ECCEEEEcCCchhhCCHhHHHHHHHHHHHHHhccCCCCCCCHHHHHHHh----cCCcHHHHHHHHHH
Confidence 4333222 2222 255443211100000 000000000000 1111112344444431 00111111111111
Q ss_pred Hhh-ccc--cccCC--c----ccccccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCce
Q 010995 161 LHD-FEM--AEVEP--I----STYVDFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGV 231 (496)
Q Consensus 161 ~~~-~~~--~~~~~--~----~~~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v 231 (496)
... +.. ..... . ......++ ...+++|++.++++|++.+.+ .|++|++|++|++|..++++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~gG~~~l~~~l~~~~~~------~G~~i~~~~~V~~i~~~~~~v 222 (421)
T 3nrn_A 152 AGWADSVSLSDLTALELAKEIRAALRWGG---PGLIRGGCKAVIDELERIIME------NKGKILTRKEVVEINIEEKKV 222 (421)
T ss_dssp HHHHHSSCGGGSBHHHHHHHHHHHHHHCS---CEEETTCHHHHHHHHHHHHHT------TTCEEESSCCEEEEETTTTEE
T ss_pred HHHhcCCCcccCCHHHHHHHHHHHhhcCC---cceecCCHHHHHHHHHHHHHH------CCCEEEcCCeEEEEEEECCEE
Confidence 100 000 00000 0 00001111 234589999999999999887 799999999999999988888
Q ss_pred EEEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEEEcCCCCCCCCCCCceEEeecCCCC
Q 010995 232 TVKTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFLKFPCKFWPCSPGKEFFIYAHERRG 311 (496)
Q Consensus 232 ~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l~~~~~~w~~~~~~~~~~~~~~~~~ 311 (496)
|. .+|++++||+||+|+|+..+.+ ++. .+.+++...+.++++.+.+..++++.++++.... ..+ .+..+..
T Consensus 223 -V~-~~g~~~~ad~Vv~a~~~~~~~~-ll~-~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~---~~~-~~~~~~~- 293 (421)
T 3nrn_A 223 -YT-RDNEEYSFDVAISNVGVRETVK-LIG-RDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIG---NTI-VFTPGLM- 293 (421)
T ss_dssp -EE-TTCCEEECSEEEECSCHHHHHH-HHC-GGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSSC---SSE-EECTTSS-
T ss_pred -EE-eCCcEEEeCEEEECCCHHHHHH-hcC-cccCCHHHHHHHhCCCCCceEEEEEEEcCCcccC---CeE-EEcCCcc-
Confidence 74 4677999999999999999987 332 2346777778889999999999999999875332 233 3332221
Q ss_pred cccc-ce-ecc--ccCCCCcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCCCCCCCCeeEecccCCCCCCCcccC
Q 010995 312 YYTF-WQ-HME--NAYPGSNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGPDIPNATDILVPRWWNNRFQRGSYS 387 (496)
Q Consensus 312 ~~~~-~~-~~~--~~~~~~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~rw~~~~~~~g~~~ 387 (496)
+..+ +. ..+ ..++|..++.++.... ..++++.++.++++|.+++| ......+++|.. +++
T Consensus 294 ~~~i~~~s~~~p~~ap~G~~~~~~~~~~~------~~~~~~~~~~~~~~L~~~~p----~~~~~~~~~~~~------~~p 357 (421)
T 3nrn_A 294 INGFNEPSALDKSLAREGYTLIMAHMALK------NGNVKKAIEKGWEELLEIFP----EGEPLLAQVYRD------GNP 357 (421)
T ss_dssp SCEEECGGGTCGGGSCTTEEEEEEEEECT------TCCHHHHHHHHHHHHHHHCT----TCEEEEEEEC-----------
T ss_pred eeeEeccCCCCCCcCCCCceEEEEEEeec------cccHHHHHHHHHHHHHHHcC----CCeEEEeeeccC------CCC
Confidence 1111 11 111 1234455555544321 12334668999999999997 223345677854 444
Q ss_pred CCC--CCCChHHHHHHhCCCCcEEEccccccCcCCccchHHHHHHHHHHHHH
Q 010995 388 NYP--IISDNQLVNSIRAPVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAV 437 (496)
Q Consensus 388 ~~~--~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~i 437 (496)
.+. ++.. . . .+| +|||+||||+.+.+.-.||||+.||.+||++|
T Consensus 358 ~~~~~~~~~---~-~-~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 358 VNRTRAGLH---I-E-WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp --------C---C-C-CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred cccccCCCC---C-C-CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 432 2221 1 1 567 99999999998732225699999999999998
No 23
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=100.00 E-value=3.5e-32 Score=277.25 Aligned_cols=407 Identities=14% Similarity=0.111 Sum_probs=246.5
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCC-CCcEEEEeeCCCCCeEEEee-eeCCcEEeecceEEecCCCCCCChHHHHH
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENG-IEDILILEASDRIGGRVRNE-KFGGVSVELGAGWIAGVGGKESNPVWELA 78 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G-~~~V~vlEa~~~~GGr~~t~-~~~g~~~d~G~~~~~~~~~~~~~~~~~l~ 78 (496)
|...+++||+|||||++||+||++|+++| . +|+|+|+++++||++++. ..+|+.+|.|++++.. .++.+.+++
T Consensus 4 m~~~~~~~v~iiG~G~~Gl~~A~~l~~~g~~-~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~----~~~~~~~l~ 78 (484)
T 4dsg_A 4 MAELLTPKIVIIGAGPTGLGAAVRLTELGYK-NWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFS----HYQYFDDVM 78 (484)
T ss_dssp ---CCSCCEEEECCSHHHHHHHHHHHHTTCC-SEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCC----SBHHHHHHH
T ss_pred CCcccCCCEEEECcCHHHHHHHHHHHHcCCC-CEEEEeCCCCCCCeeeeeecCCCcEEeeCCccccc----ChHHHHHHH
Confidence 33446789999999999999999999998 7 699999999999999995 6789999999999977 777889999
Q ss_pred HhcCCccccccCCCcceEEEcCCCcccChh-------HHHHHHHHHHHHHHHH-hccccccchhHHHHHHhhhcCCCCCC
Q 010995 79 SKSGLRTCFSDYTNARYNIYDRSGKIIPSG-------VAADSYKKAVESAIAN-LKNLEATNSNIGEVIKAATELPSSPK 150 (496)
Q Consensus 79 ~~lgl~~~~~~~~~~~~~~~~~~g~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (496)
+++. .... ......+ ...+|+.++.+ ............+... .........++.+|+...........
T Consensus 79 ~~~~-~~~~-~~~~~~~--~~~~g~~~~~P~~~~~~~l~~~~~~~~~~~ll~~~~~~~~~~~~s~~e~~~~~~g~~~~~~ 154 (484)
T 4dsg_A 79 DWAV-QGWN-VLQRESW--VWVRGRWVPYPFQNNIHRLPEQDRKRCLDELVRSHARTYTEPPNNFEESFTRQFGEGIADI 154 (484)
T ss_dssp HHHC-SCEE-EEECCCE--EEETTEEEESSGGGCGGGSCHHHHHHHHHHHHHHHHCCCSSCCSSHHHHHHHHHHHHHCCC
T ss_pred HHHh-hhhh-hccCceE--EEECCEEEEeCccchhhhCCHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHhHHHHHHH
Confidence 9874 3221 2222112 22355543321 0001111111111111 11111122234444432110000000
Q ss_pred ChHHHHHHHHHhhccccccC------Cc-------cc-cc-----ccCCcc-eeeeCcccHHHHHHHHHHhhccCCCCCc
Q 010995 151 TPLELAIDFILHDFEMAEVE------PI-------ST-YV-----DFGERE-FLVADERGYAHLLYKMAEEFLSTSDGKI 210 (496)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~------~~-------~~-~~-----~~~~~~-~~~~~~~G~~~l~~~l~~~~~~~~~~~~ 210 (496)
-........+..+....+.. +. .. +. ..+... +.+..++|++.++++|++.+.+
T Consensus 155 ~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~~l~~~la~~l~~------ 228 (484)
T 4dsg_A 155 FMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTGIIYQAIKEKLPS------ 228 (484)
T ss_dssp CCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTHHHHHHHHHHSCG------
T ss_pred HHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHHHHHHHHHhhhhh------
Confidence 00001111111110000000 00 00 00 001111 2223468999999999998642
Q ss_pred cccceeeC--ceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEEE
Q 010995 211 LDNRLKLN--KVVRELQHSRNGVTVKTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFLK 288 (496)
Q Consensus 211 ~g~~i~~~--~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l~ 288 (496)
.+|+++ ++|++|+.++++|+ +.+|+++.||+||+|+|+..+.+.+-...+++++...+.+..++|.+..+|++.
T Consensus 229 --~~i~~~~~~~V~~I~~~~~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~ 304 (484)
T 4dsg_A 229 --EKLTFNSGFQAIAIDADAKTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIG 304 (484)
T ss_dssp --GGEEECGGGCEEEEETTTTEEE--ETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEE
T ss_pred --CeEEECCCceeEEEEecCCEEE--ECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEE
Confidence 279999 56999998888654 477888999999999999999873211234577778889999999999999999
Q ss_pred cCCCCCCC-CCCCceEEeecCCCC--ccccceeccc--cCCCCcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCC
Q 010995 289 FPCKFWPC-SPGKEFFIYAHERRG--YYTFWQHMEN--AYPGSNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGP 363 (496)
Q Consensus 289 ~~~~~w~~-~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~ 363 (496)
|+.+...+ .+++.+++ .+.... ..+++.+..+ .+++..+++..+... ....++|+++++.++++|.++.+.
T Consensus 305 ~~~~~~~~~~~~~~i~v-p~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~---~~~~~~d~~l~~~a~~~L~~~~~~ 380 (484)
T 4dsg_A 305 VKGTPPPHLKTACWLYF-PEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES---KYKPVNHSTLIEDCIVGCLASNLL 380 (484)
T ss_dssp EESCCCGGGTTCCEEEC-CSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB---TTBCCCTTSHHHHHHHHHHHTTSC
T ss_pred EcCCCcccCCCCeEEEE-EcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC---cCCcCCHHHHHHHHHHHHHHcCCC
Confidence 98863211 11223332 222221 1222333221 234445666555422 344679999999999999998755
Q ss_pred CCCCC-CeeEecccCCCCCCCcccCCCCCCCChH---HHHHHhCCCCcEEEccccccCcCC-ccchHHHHHHHHHHHHHH
Q 010995 364 DIPNA-TDILVPRWWNNRFQRGSYSNYPIISDNQ---LVNSIRAPVAGIFFTGEHTSERFN-GYVHGGYLAGIDTGKAVV 438 (496)
Q Consensus 364 ~~~~~-~~~~~~rw~~~~~~~g~~~~~~~g~~~~---~~~~~~~p~~~l~~aGd~~~~~~~-g~~egA~~SG~~aA~~il 438 (496)
...++ ....++||.. +|+.+.+|+... .+..+.+ . ||+++|.+....|. ..|+.|+.||++||++|+
T Consensus 381 ~~~~~~~~~~v~r~~~------~yP~y~~~~~~~~~~~~~~l~~-~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 381 LPEDLLVSKWHYRIEK------GYPTPFIGRNNLLEKAQPELMS-R-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp CTTCCEEEEEEEEEEE------EEECCBTTHHHHHHHHHHHHHH-T-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred CccceEEEEEEEEeCc------cccCCCccHHHHHHHHHHHHHh-C-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 43333 3456889966 899999997422 3333443 3 99999997765332 469999999999999997
No 24
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=100.00 E-value=1.4e-31 Score=269.58 Aligned_cols=387 Identities=17% Similarity=0.197 Sum_probs=227.4
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCC-CCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHH
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENG-IEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELAS 79 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G-~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~ 79 (496)
|+..+++||+|||||++||+||++|+++| + +|+|||+++++||+++|.+.+|+.+|.|++++.. .+..+.++++
T Consensus 1 M~~~~~~~v~IIGaG~aGl~aA~~L~~~g~~-~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~----~~~~~~~l~~ 75 (424)
T 2b9w_A 1 MSISKDSRIAIIGAGPAGLAAGMYLEQAGFH-DYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVP----SYDTIQEIMD 75 (424)
T ss_dssp -CCCTTCCEEEECCSHHHHHHHHHHHHTTCC-CEEEECSSSCSSTTCCCCEETTEECCSSCCCBCT----TCHHHHHHHH
T ss_pred CCCCCCCCEEEECcCHHHHHHHHHHHhCCCC-cEEEEECCCCCCCcccccCCCCcccccCceeecC----CcHHHHHHHH
Confidence 66567889999999999999999999999 8 6999999999999999999999999999999876 7788999999
Q ss_pred hcCCccccccCCCcceEEEcCCCcccC-hh--H----HHHHHHHHHHHHHHHhccc----------cccchhHHHHHHhh
Q 010995 80 KSGLRTCFSDYTNARYNIYDRSGKIIP-SG--V----AADSYKKAVESAIANLKNL----------EATNSNIGEVIKAA 142 (496)
Q Consensus 80 ~lgl~~~~~~~~~~~~~~~~~~g~~~~-~~--~----~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 142 (496)
++|++..... ....++..+|.... .. . ....+..+........... .....++.+++...
T Consensus 76 ~~g~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~ 152 (424)
T 2b9w_A 76 RTGDKVDGPK---LRREFLHEDGEIYVPEKDPVRGPQVMAAVQKLGQLLATKYQGYDANGHYNKVHEDLMLPFDEFLALN 152 (424)
T ss_dssp HHCCCCCSCC---CCEEEECTTSCEECGGGCTTHHHHHHHHHHHHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHHHHHT
T ss_pred HhCCcccccc---ccceeEcCCCCEeccccCcccchhHHHHHHHHHHHHhhhhhhcccccchhhhhhhhccCHHHHHHhh
Confidence 9998754321 11234455665432 11 0 0111111111111111100 01122455555531
Q ss_pred hcCCCCCCChHHHHHHHHHhhcc---ccccCCcc--c---c------cccCCcceeeeCcccHHHHHHHHHHhhccCCCC
Q 010995 143 TELPSSPKTPLELAIDFILHDFE---MAEVEPIS--T---Y------VDFGEREFLVADERGYAHLLYKMAEEFLSTSDG 208 (496)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~---~------~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~ 208 (496)
. .. .. .+.+...+- ........ . + ..+... ......+|++.++++|.+.
T Consensus 153 ~----~~-~~----~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~l~~~l~~~------- 215 (424)
T 2b9w_A 153 G----CE-AA----RDLWINPFTAFGYGHFDNVPAAYVLKYLDFVTMMSFAKG-DLWTWADGTQAMFEHLNAT------- 215 (424)
T ss_dssp T----CG-GG----HHHHTTTTCCCCCCCTTTSBHHHHHHHSCHHHHHHHHHT-CCBCCTTCHHHHHHHHHHH-------
T ss_pred C----cH-HH----HHHHHHHHHhhccCChHhcCHHHHHHhhhHhhhhcccCC-ceEEeCChHHHHHHHHHHh-------
Confidence 0 00 00 111110000 00000000 0 0 000001 1224578999999999988
Q ss_pred CccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEEE
Q 010995 209 KILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFLK 288 (496)
Q Consensus 209 ~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l~ 288 (496)
.+.+|++|++|++|..++++|+|++.+| +++||+||+|+|+..+.+ +.|++++. ++.+.++.+.++. +.+.
T Consensus 216 --l~~~v~~~~~V~~i~~~~~~v~v~~~~g-~~~ad~Vv~a~~~~~~~~----~l~~~~~~-~~~~~~~~~~~~~-~~~~ 286 (424)
T 2b9w_A 216 --LEHPAERNVDITRITREDGKVHIHTTDW-DRESDVLVLTVPLEKFLD----YSDADDDE-REYFSKIIHQQYM-VDAC 286 (424)
T ss_dssp --SSSCCBCSCCEEEEECCTTCEEEEESSC-EEEESEEEECSCHHHHTT----SBCCCHHH-HHHHTTCEEEEEE-EEEE
T ss_pred --hcceEEcCCEEEEEEEECCEEEEEECCC-eEEcCEEEECCCHHHHhh----ccCCCHHH-HHHHhcCCcceeE-EEEE
Confidence 4568999999999999888899999888 589999999999998865 23445443 3455666665532 2222
Q ss_pred cCCCCCCCCCCCceEEeecC---CCCccccceeccccCCC-CcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCCC
Q 010995 289 FPCKFWPCSPGKEFFIYAHE---RRGYYTFWQHMENAYPG-SNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGPD 364 (496)
Q Consensus 289 ~~~~~w~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~~ 364 (496)
+...++ . ...+...+. ..+ +.+|... ..+.+ ..+++++..+ ....+...+++++++.++++|.+ ++.+
T Consensus 287 ~~~~~~-~---~~~~~~~~~~~~~~g-~~~~~~~-~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~v~~~l~~-l~~~ 358 (424)
T 2b9w_A 287 LVKEYP-T---ISGYVPDNMRPERLG-HVMVYYH-RWADDPHQIITTYLLR-NHPDYADKTQEECRQMVLDDMET-FGHP 358 (424)
T ss_dssp EESSCC-S---SEEECGGGGSGGGTT-SCCEEEE-CCTTCTTSCEEEEEEC-CBTTBCCCCHHHHHHHHHHHHHH-TTCC
T ss_pred EeccCC-c---ccccccCCCCCcCCC-cceEEee-ecCCCCceEEEEEecc-CCCcccccChHHHHHHHHHHHHH-cCCc
Confidence 222221 1 112221111 111 1222211 11122 3456665554 34567778899999999999998 5543
Q ss_pred CCCCCeeEecccCCCCCCCcccCCCCCCCChHHHHHHhCCCCcEEEccccccCcCCccchHHHHHHHHHHHHHH
Q 010995 365 IPNATDILVPRWWNNRFQRGSYSNYPIISDNQLVNSIRAPVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVV 438 (496)
Q Consensus 365 ~~~~~~~~~~rw~~~~~~~g~~~~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il 438 (496)
.+++. ....|...|.. +-..+..|. .......++.+||||||+|+.. |++|+|+.||++||++|+
T Consensus 359 ~~~~~--~~~~w~~~p~~--~~~~~~~G~--~~~~~~~~~~~~l~~aG~~~~~---g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 359 VEKII--EEQTWYYFPHV--SSEDYKAGW--YEKVEGMQGRRNTFYAGEIMSF---GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp EEEEE--EEEEEEEEEEC--CHHHHHTTH--HHHHHHTTTGGGEEECSGGGSC---SSHHHHHHHHHHHHHHHT
T ss_pred ccccc--cccceeeeecc--CHHHHhccH--HHHHHHHhCCCCceEecccccc---ccHHHHHHHHHHHHHHhc
Confidence 22222 23456431110 000112222 1122233456799999999864 789999999999999875
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.97 E-value=2.9e-30 Score=251.78 Aligned_cols=327 Identities=14% Similarity=0.236 Sum_probs=227.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCCcc
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGLRT 85 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl~~ 85 (496)
++||+|||||++||++|+.|+++|+ +|+|||+++.+||++.+....+..+|.|..++.. ....+.++++++....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~-~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 76 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTA----RDRRFATAVKQWQAQG 76 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCGGGCEEEETTEEEECSCCCBCC----CSHHHHHHHHHHHHHT
T ss_pred CceEEEECCcHHHHHHHHHHHHCCC-cEEEEECCCCCcccceeEecCCCeEecCCCeEec----CCHHHHHHHHHHHhCC
Confidence 5799999999999999999999999 6999999999999999988889999999988876 5556666666543211
Q ss_pred ccccCCCcceEEEcCCCcccChhHHHHHHHHHHHHHHHHhccccccchhHHHHHHhhhcCCCCCCChHHHHHHHHHhhcc
Q 010995 86 CFSDYTNARYNIYDRSGKIIPSGVAADSYKKAVESAIANLKNLEATNSNIGEVIKAATELPSSPKTPLELAIDFILHDFE 165 (496)
Q Consensus 86 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (496)
....+... ...+ .++... .
T Consensus 77 ~~~~~~~~-~~~~-~~~~~~-----------------------------------------~------------------ 95 (336)
T 1yvv_A 77 HVAEWTPL-LYNF-HAGRLS-----------------------------------------P------------------ 95 (336)
T ss_dssp SEEEECCC-EEEE-SSSBCC-----------------------------------------C------------------
T ss_pred Ceeecccc-ceec-cCcccc-----------------------------------------c------------------
Confidence 11111110 0011 111000 0
Q ss_pred ccccCCcccccccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEE-cC
Q 010995 166 MAEVEPISTYVDFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYE-AN 244 (496)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~-ad 244 (496)
..... .. +....|++.+.+.+++ |++|+++++|++|+.++++|.|++.+|+.+. ||
T Consensus 96 ----------~~~~~-~~-~~~~~~~~~l~~~l~~-----------g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~ 152 (336)
T 1yvv_A 96 ----------SPDEQ-VR-WVGKPGMSAITRAMRG-----------DMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFS 152 (336)
T ss_dssp ----------CCTTS-CE-EEESSCTHHHHHHHHT-----------TCCEECSCCEEEEEECSSCEEEEETTSCEEEEES
T ss_pred ----------CCCCC-cc-EEcCccHHHHHHHHHc-----------cCcEEecCEEEEEEEeCCEEEEEeCCCcCccccC
Confidence 00000 11 1224688888887765 4579999999999999999999999987664 99
Q ss_pred EEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEEEcCCCCCCCCCCCceEEeecCCCCccccceecc-ccC
Q 010995 245 YVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFLKFPCKFWPCSPGKEFFIYAHERRGYYTFWQHME-NAY 323 (496)
Q Consensus 245 ~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 323 (496)
+||+|+|+..+.+ ++.+ .| .....+..++|.++.++++.|++++|.. ...++. .+ .....++.... +..
T Consensus 153 ~vV~a~g~~~~~~-~~~~---~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~--~~~~~l~~~~~~p~~ 222 (336)
T 1yvv_A 153 HVIIATPAPQAST-LLAA---AP-KLASVVAGVKMDPTWAVALAFETPLQTP--MQGCFV-QD--SPLDWLARNRSKPER 222 (336)
T ss_dssp EEEECSCHHHHGG-GGTT---CH-HHHHHHTTCCEEEEEEEEEEESSCCSCC--CCEEEE-CS--SSEEEEEEGGGSTTC
T ss_pred EEEEcCCHHHHHH-hhcc---CH-HHHHHHhhcCccceeEEEEEecCCCCCC--CCeEEe-CC--CceeEEEecCcCCCC
Confidence 9999999999887 3323 22 3467788999999999999999998864 223332 11 11111222111 111
Q ss_pred CCC-cEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCCCCCCCCeeEecccCCCCCCCcccCCCCCCCChHHHHHHh
Q 010995 324 PGS-NILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGPDIPNATDILVPRWWNNRFQRGSYSNYPIISDNQLVNSIR 402 (496)
Q Consensus 324 ~~~-~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~rw~~~~~~~g~~~~~~~g~~~~~~~~~~ 402 (496)
.+. ..++.+..++.+..+..++++++.+.+++.|.+++|...+.|....++||.. +++.+..+.. ...
T Consensus 223 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p~~~~~~rw~~------a~~~~~~~~~-----~~~ 291 (336)
T 1yvv_A 223 DDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAPVFSLAHRWLY------ARPAGAHEWG-----ALS 291 (336)
T ss_dssp CCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCCSEEEEEEEEE------EEESSCCCCS-----CEE
T ss_pred CCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEccccCc------cCCCCCCCCC-----eee
Confidence 122 3455555555677788899999999999999999987666777788999964 3333333321 122
Q ss_pred CCCCcEEEccccccCcCCccchHHHHHHHHHHHHHHHHHhccc
Q 010995 403 APVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVEKIRKDN 445 (496)
Q Consensus 403 ~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~~l~~~~ 445 (496)
.+.++|+|||||++. +++|+|+.||.++|+.|.+.+....
T Consensus 292 ~~~~rl~laGDa~~g---~gv~~a~~sg~~lA~~l~~~~~~~~ 331 (336)
T 1yvv_A 292 DADLGIYVCGDWCLS---GRVEGAWLSGQEAARRLLEHLQLEH 331 (336)
T ss_dssp ETTTTEEECCGGGTT---SSHHHHHHHHHHHHHHHHHHTTC--
T ss_pred cCCCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHhhhhh
Confidence 355899999999975 5899999999999999999976543
No 26
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.93 E-value=5.8e-26 Score=225.82 Aligned_cols=345 Identities=14% Similarity=0.164 Sum_probs=192.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCcEEEEeeCCCCCeEEEeeee--CCcEEe-ecceEEecCCCCCCChHHHHHHh
Q 010995 5 SRSPVIIIGAGVSGISAGKILAEN-GIEDILILEASDRIGGRVRNEKF--GGVSVE-LGAGWIAGVGGKESNPVWELASK 80 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~-G~~~V~vlEa~~~~GGr~~t~~~--~g~~~d-~G~~~~~~~~~~~~~~~~~l~~~ 80 (496)
.++||+|||||++||+||+.|+++ |+ +|+|||+++++||+++|... +|..+| .|+++++. .++.+++++++
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~-~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~----~~~~~~~~~~~ 80 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDK-RVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHT----SNKRVWDYVRQ 80 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCC-CEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEE----SCHHHHHHHTT
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCC-CEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcC----CcHHHHHHHHH
Confidence 368999999999999999999999 99 69999999999999999887 688885 99999998 78899999999
Q ss_pred cCCccccccCCCcceEEEcCCCcccC--hhH--HHHHHH-----HHHH-HHHHHhcccc-ccchhHHHHHHhhhcCCCCC
Q 010995 81 SGLRTCFSDYTNARYNIYDRSGKIIP--SGV--AADSYK-----KAVE-SAIANLKNLE-ATNSNIGEVIKAATELPSSP 149 (496)
Q Consensus 81 lgl~~~~~~~~~~~~~~~~~~g~~~~--~~~--~~~~~~-----~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 149 (496)
+|+.. .+.... .+..+|+.++ ... ...++. .... .+........ ....++.+++.... .
T Consensus 81 ~g~~~---~~~~~~--~~~~~G~~~~~p~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~e~l~~~~-----g 150 (399)
T 1v0j_A 81 FTDFT---DYRHRV--FAMHNGQAYQFPMGLGLVSQFFGKYFTPEQARQLIAEQAAEIDTADAQNLEEKAISLI-----G 150 (399)
T ss_dssp TCCBC---CCCCCE--EEEETTEEEEESSSHHHHHHHHTSCCCHHHHHHHHHHHGGGSCTTC----CCHHHHHH-----C
T ss_pred hhhhh---ccccce--EEEECCEEEeCCCCHHHHHHHhcccCCHHHHHHHHHHHhhccCCCCcccHHHHHHHHH-----h
Confidence 99732 222222 2334666543 211 111111 0011 1111111110 01112222222100 0
Q ss_pred CChHHHHHHHHH-hhccc--cccC--Ccccc---cc----cCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceee
Q 010995 150 KTPLELAIDFIL-HDFEM--AEVE--PISTY---VD----FGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKL 217 (496)
Q Consensus 150 ~~~~~~~~~~~~-~~~~~--~~~~--~~~~~---~~----~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~ 217 (496)
....+..+..+. ..+.. .++. ....+ .. +....+...+++|++.++++|++. .|++|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~---------~g~~I~l 221 (399)
T 1v0j_A 151 RPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAAD---------HRIEVRL 221 (399)
T ss_dssp HHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHHHHHHHHHTCS---------TTEEEEC
T ss_pred HHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccHHHHHHHHHhc---------CCeEEEE
Confidence 000111111111 11100 0111 00000 00 111112226689999999999885 6789999
Q ss_pred CceeEEEEEcCCceEEEeCCCcEE-EcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEEEcCCCCCCC
Q 010995 218 NKVVRELQHSRNGVTVKTEDGCVY-EANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFLKFPCKFWPC 296 (496)
Q Consensus 218 ~~~V~~I~~~~~~v~V~~~~G~~~-~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l~~~~~~w~~ 296 (496)
|++|++|..+ | + ++ .||+||+|+|+..+.+ + .+..++|.+...+.+.++.+.+..
T Consensus 222 ~~~V~~I~~~---v-----~--~~~~aD~VI~t~p~~~l~~--~------------~l~~l~y~s~~~~~~~~~~~~~~~ 277 (399)
T 1v0j_A 222 NTDWFDVRGQ---L-----R--PGSPAAPVVYTGPLDRYFD--Y------------AEGRLGWRTLDFEVEVLPIGDFQG 277 (399)
T ss_dssp SCCHHHHHHH---H-----T--TTSTTCCEEECSCHHHHTT--T------------TTCCCCEEEEEEEEEEESSSCSSS
T ss_pred CCchhhhhhh---h-----h--hcccCCEEEECCcHHHHHh--h------------hhCCCCcceEEEEEEEEccccCCC
Confidence 9999999643 2 1 34 6999999999999876 2 134678888788888887654322
Q ss_pred CCCCceEEeecCCCCcc--ccceeccc-c--CCCCcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCCCCCCCCee
Q 010995 297 SPGKEFFIYAHERRGYY--TFWQHMEN-A--YPGSNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGPDIPNATDI 371 (496)
Q Consensus 297 ~~~~~~~~~~~~~~~~~--~~~~~~~~-~--~~~~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~ 371 (496)
..++.+.+...... +.+.++.. . +++..++...+.
T Consensus 278 ---~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~v~~e~~------------------------------------- 317 (399)
T 1v0j_A 278 ---TAVMNYNDLDVPYTRIHEFRHFHPERDYPTDKTVIMREYS------------------------------------- 317 (399)
T ss_dssp ---SSEEEECCTTSSCSEEEEGGGGCTTSCCCSSCEEEEEEEE-------------------------------------
T ss_pred ---CeEEEeCCCCCCcceeEeecCCCCCCcCCCCCeEEEEeec-------------------------------------
Confidence 22333332211111 11111211 1 112222222221
Q ss_pred EecccCCCCCCCcccCCCCCCCChH--HHHHHhCCC---CcEEEccccccCcCCccchHHHHHHHHHHHHHHHHHh
Q 010995 372 LVPRWWNNRFQRGSYSNYPIISDNQ--LVNSIRAPV---AGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVEKIR 442 (496)
Q Consensus 372 ~~~rw~~~~~~~g~~~~~~~g~~~~--~~~~~~~p~---~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~~l~ 442 (496)
..|.. .....|+.+.+++... ....+..+. +||+|||++.+.. +++||+++.||++||++|.+...
T Consensus 318 --~~~~~--~~~~~ypv~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~-~~~~e~~i~sa~~~a~~l~~~~~ 388 (399)
T 1v0j_A 318 --RFAED--DDEPYYPINTEADRALLATYRARAKSETASSKVLFGGRLGTYQ-YLDMHMAIASALNMYDNVLAPHL 388 (399)
T ss_dssp --EECCT--TSCCCEECCCHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHTC-CCCHHHHHHHHHHHHHHTHHHHH
T ss_pred --ccccC--CCccccccCcHHHHHHHHHHHHHHHhccccCCEEEccceEEEE-ecCHHHHHHHHHHHHHHHhhhhh
Confidence 11321 0111244444443211 233333334 7999999997663 47899999999999999986544
No 27
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.89 E-value=3.9e-22 Score=196.95 Aligned_cols=339 Identities=15% Similarity=0.195 Sum_probs=191.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeee--CCcEE-eecceEEecCCCCCCChHHHHHHhcC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKF--GGVSV-ELGAGWIAGVGGKESNPVWELASKSG 82 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~--~g~~~-d~G~~~~~~~~~~~~~~~~~l~~~lg 82 (496)
+.||+|||||++||+||+.|+++|+ +|+|+|+++++||+++|... .|..+ |.|+++++. .++.+++++++++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~-~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~----~~~~~~~~~~~l~ 77 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHT----DNETVWNYVNKHA 77 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEE----SCHHHHHHHHTTS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC-cEEEEEecCCcCCccccccccCCCceEeeCCceEECC----CCHHHHHHHHHHh
Confidence 4799999999999999999999999 79999999999999999887 68876 899999998 7889999999998
Q ss_pred CccccccCCCcceEEEcCCCccc--ChhH--HHHHHH------HHHHHHHHHhccccccchhHHHHHHhhhcCCCCCCCh
Q 010995 83 LRTCFSDYTNARYNIYDRSGKII--PSGV--AADSYK------KAVESAIANLKNLEATNSNIGEVIKAATELPSSPKTP 152 (496)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~g~~~--~~~~--~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (496)
... ++.... ....+|..+ |... ...++. ..................++.++..... ....
T Consensus 78 ~~~---~~~~~~--~~~~~g~~~~~P~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~sl~e~~~~~~-----g~~~ 147 (384)
T 2bi7_A 78 EMM---PYVNRV--KATVNGQVFSLPINLHTINQFFSKTCSPDEARALIAEKGDSTIADPQTFEEEALRFI-----GKEL 147 (384)
T ss_dssp CEE---ECCCCE--EEEETTEEEEESCCHHHHHHHTTCCCCHHHHHHHHHHHSCCSCSSCCBHHHHHHHHH-----CHHH
T ss_pred hhc---ccccce--EEEECCEEEECCCChhHHHHHhcccCCHHHHHHHHHHhhhccCCCCcCHHHHHHHhh-----cHHH
Confidence 632 222221 222355432 3221 111110 0111111111111112223444443311 0001
Q ss_pred HHHHHHHH-Hhhccc--cccC--Cc------cccc-ccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCce
Q 010995 153 LELAIDFI-LHDFEM--AEVE--PI------STYV-DFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKV 220 (496)
Q Consensus 153 ~~~~~~~~-~~~~~~--~~~~--~~------~~~~-~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~ 220 (496)
.+..+..+ ...+.. .++. .. ..+. .+....+...+++|++.++++|++. .|++|++|++
T Consensus 148 ~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~---------~g~~I~l~~~ 218 (384)
T 2bi7_A 148 YEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGYTQMIKSILNH---------ENIKVDLQRE 218 (384)
T ss_dssp HHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHHHHHHHHHHCS---------TTEEEEESCC
T ss_pred HHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCHHHHHHHHHhc---------CCCEEEECCe
Confidence 11111111 111110 0000 00 0000 0111122236689999999999885 6789999999
Q ss_pred eE-EEEEcCCceEEEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEEEcCCCCCCCCCC
Q 010995 221 VR-ELQHSRNGVTVKTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFLKFPCKFWPCSPG 299 (496)
Q Consensus 221 V~-~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l~~~~~~w~~~~~ 299 (496)
|+ +|.. .||+||+|+|+..+.+. .+..++|.+...+.+.++ +... +
T Consensus 219 V~~~i~~---------------~~d~VI~a~p~~~~~~~--------------~lg~l~y~s~~~v~~~~d-~~~~---~ 265 (384)
T 2bi7_A 219 FIVEERT---------------HYDHVFYSGPLDAFYGY--------------QYGRLGYRTLDFKKFTYQ-GDYQ---G 265 (384)
T ss_dssp CCGGGGG---------------GSSEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEEE-SCSS---S
T ss_pred eehhhhc---------------cCCEEEEcCCHHHHHHh--------------hcCCCCcceEEEEEEEeC-CCCC---C
Confidence 99 7752 29999999999998762 124578888887888886 2211 2
Q ss_pred CceEEeecCCCCcccc--ceecc-ccCCCCcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCCCCCCCCeeEeccc
Q 010995 300 KEFFIYAHERRGYYTF--WQHME-NAYPGSNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGPDIPNATDILVPRW 376 (496)
Q Consensus 300 ~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~rw 376 (496)
..++.+.+.+..+..+ +.++. ...++.+++...+.. .|
T Consensus 266 ~~~~n~~~~~~~~~ri~~~~~~~~~~~~~~~~v~~e~~~---------------------------------------~~ 306 (384)
T 2bi7_A 266 CAVMNYCSVDVPYTRITEHKYFSPWEQHDGSVCYKEYSR---------------------------------------AC 306 (384)
T ss_dssp SSEEEECSTTSSSSEEEEGGGGCTTSCCSEEEEEEEEEE---------------------------------------EC
T ss_pred CEEEEecCCCCCeeeEEEeeccCCCCCCCCEEEEEEEec---------------------------------------cc
Confidence 2333343222111111 11111 111222332222211 23
Q ss_pred C-C-CCCCCcccCCCCCCCCh--HHHHHHhCCCCcEEEccccccCcCCccchHHHHHHHHHHHHHHHHHhccc
Q 010995 377 W-N-NRFQRGSYSNYPIISDN--QLVNSIRAPVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVEKIRKDN 445 (496)
Q Consensus 377 ~-~-~~~~~g~~~~~~~g~~~--~~~~~~~~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~~l~~~~ 445 (496)
. . .| .|+.+..++.. +....+....+||+|||.+...+ ++.||.++.||+++|++++..+....
T Consensus 307 ~~~~~p----~ypv~~~~~~~~~~~~~~~~~~~~~~~~~Gr~~~~~-~~~~~d~i~sa~~~a~~~~~~~~~~~ 374 (384)
T 2bi7_A 307 EENDIP----YYPIRQMGEMALLEKYLSLAENETNITFVGRLGTYR-YLDMDVTIAEALKTAEVYLNSLTENQ 374 (384)
T ss_dssp CTTCCC----CEECCCHHHHHHHHHHHHHHTTCSSEEECHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCcc----ccccCChhHHHHHHHHHHHHhcCCCEEEccccEEEE-eCCHHHHHHHHHHHHHHHhhhhhccC
Confidence 2 1 11 13333333321 12233444457999999987643 35899999999999999998776544
No 28
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.87 E-value=2.6e-21 Score=189.97 Aligned_cols=336 Identities=14% Similarity=0.159 Sum_probs=186.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEe-ecceEEecCCCCCCChHHHHHHhcCCc
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVE-LGAGWIAGVGGKESNPVWELASKSGLR 84 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d-~G~~~~~~~~~~~~~~~~~l~~~lgl~ 84 (496)
++||+|||||++||+||+.|+++|+ +|+|+|+++++||++.+...+|..+| .|+++++. .++.+++++++++..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~-~v~v~E~~~~~GG~~~~~~~~g~~~~~~G~~~~~~----~~~~~~~~~~~l~~~ 75 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNK-KVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHT----NDKYIWDYVNDLVEF 75 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTC-CEEEECSSSSSSGGGCEEEETTEEEETTSCCCEEE----SCHHHHHHHHTTSCB
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCC-cEEEEecCCCCCcceEeeccCCceeeccCCceecC----CCHHHHHHHHHhhhh
Confidence 3689999999999999999999999 69999999999999999888899996 99999998 678899999998863
Q ss_pred cccccCCCcceEEEcCCCcccC--hhH--HHHHHH----HHHHHHHH-Hhcccc-ccchhHHHHHHhhhcCCCCCCChHH
Q 010995 85 TCFSDYTNARYNIYDRSGKIIP--SGV--AADSYK----KAVESAIA-NLKNLE-ATNSNIGEVIKAATELPSSPKTPLE 154 (496)
Q Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~--~~~--~~~~~~----~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (496)
. .+..... ...+|..++ ... ...++. .....+.. ...... ....++.+++..... ....+
T Consensus 76 ~---~~~~~~~--~~~~g~~~~~p~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~~g-----~~~~~ 145 (367)
T 1i8t_A 76 N---RFTNSPL--AIYKDKLFNLPFNMNTFHQMWGVKDPQEAQNIINAQKKKYGDKVPENLEEQAISLVG-----EDLYQ 145 (367)
T ss_dssp C---CCCCCCE--EEETTEEEESSBSHHHHHHHHCCCCHHHHHHHHHHHTTTTCCCCCCSHHHHHHHHHH-----HHHHH
T ss_pred h---hccccce--EEECCeEEEcCCCHHHHHHHhccCCHHHHHHHHHHHhhccCCCCCccHHHHHHHHHh-----HHHHH
Confidence 2 2222222 223555433 221 111110 00111111 111111 112233444432100 00001
Q ss_pred HHHHHH-----HhhccccccCCcccc---c----ccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeE
Q 010995 155 LAIDFI-----LHDFEMAEVEPISTY---V----DFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVR 222 (496)
Q Consensus 155 ~~~~~~-----~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~ 222 (496)
..+..+ ..+...........+ . .+....+...+++|++.++++|++. ++|++|++|+
T Consensus 146 ~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~g-----------~~i~l~~~V~ 214 (367)
T 1i8t_A 146 ALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLEG-----------VDVKLGIDFL 214 (367)
T ss_dssp HHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHHHHHHHHHTT-----------SEEECSCCGG
T ss_pred HHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCHHHHHHHHhcC-----------CEEEeCCcee
Confidence 111111 111110011001000 0 0111122236789999999998763 5799999999
Q ss_pred EEEEcCCceEEEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEEEcCCCCCCCCCCCce
Q 010995 223 ELQHSRNGVTVKTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFLKFPCKFWPCSPGKEF 302 (496)
Q Consensus 223 ~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l~~~~~~w~~~~~~~~ 302 (496)
+|.. +| .+.||+||+|+|+..+.+. .+..++|.+...+.+.++.+..+ +..+
T Consensus 215 ~i~~---~v--------~~~~D~VV~a~p~~~~~~~--------------~l~~l~y~s~~~v~~~~d~~~~~---~~~~ 266 (367)
T 1i8t_A 215 KDKD---SL--------ASKAHRIIYTGPIDQYFDY--------------RFGALEYRSLKFETERHEFPNFQ---GNAV 266 (367)
T ss_dssp GSHH---HH--------HTTEEEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEESSSCSS---SSSE
T ss_pred eech---hh--------hccCCEEEEeccHHHHHHH--------------hhCCCCCceEEEEEEEeccccCC---CCeE
Confidence 8862 12 1358999999999998651 13467888888888888876443 2233
Q ss_pred EEeecCCCCcccc--ceeccccCCCCcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCCCCCCCCeeEecccC--C
Q 010995 303 FIYAHERRGYYTF--WQHMENAYPGSNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGPDIPNATDILVPRWW--N 378 (496)
Q Consensus 303 ~~~~~~~~~~~~~--~~~~~~~~~~~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~rw~--~ 378 (496)
+.+.+....+..+ +.++.+...+..+++..+... |. .
T Consensus 267 ~~~~~~~~~~~ri~~~~~~~~~~~~~~~v~~e~~~~---------------------------------------~~~~~ 307 (367)
T 1i8t_A 267 INFTDANVPYTRIIEHKHFDYVETKHTVVTKEYPLE---------------------------------------WKVGD 307 (367)
T ss_dssp EEECCTTSSCSEEEEGGGGSCCCCSCEEEEEEEEEE---------------------------------------CCTTS
T ss_pred EEeCCCCCceeeEEeecccCCCCCCCEEEEEEEecc---------------------------------------cCCCC
Confidence 3333222221111 111111111223333333211 21 0
Q ss_pred CCCCCcccCCCCCCCChH--HHHHHhCCCCcEEEccccccCcCCccchHHHHHHHHHHHHHHH
Q 010995 379 NRFQRGSYSNYPIISDNQ--LVNSIRAPVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVE 439 (496)
Q Consensus 379 ~~~~~g~~~~~~~g~~~~--~~~~~~~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~ 439 (496)
.| .|+.+.++.... ......+..+|++|||.+...+ ++.||.++.||+++|+++++
T Consensus 308 ~p----~ypv~~~~~~~~~~~~~~~~~~~~~~~~~Gr~~~~~-y~~~~d~i~sa~~~a~~~~~ 365 (367)
T 1i8t_A 308 EP----YYPVNDNKNMELFKKYRELASREDKVIFGGRLAEYK-YYDMHQVISAALYQVKNIMS 365 (367)
T ss_dssp CC----CEECCSHHHHHHHHHHHHHHHHCTTEEECSTTTTTS-CCCHHHHHHHHHHHHHHHHS
T ss_pred ee----ecccCChhHHHHHHHHHHHHhcCCCEEEcccceeeE-ecCHHHHHHHHHHHHHHHhc
Confidence 11 233333333211 1222223357999999986653 35899999999999998863
No 29
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.86 E-value=9.8e-21 Score=185.73 Aligned_cols=338 Identities=14% Similarity=0.170 Sum_probs=193.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeee-eCCcEE-eecceEEecCCCCCCChHHHHHHhcC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEK-FGGVSV-ELGAGWIAGVGGKESNPVWELASKSG 82 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~-~~g~~~-d~G~~~~~~~~~~~~~~~~~l~~~lg 82 (496)
..+||+|||||++||+||+.|+++|. +|+|+|+++++||++++.. ..|+.+ |.|+|+++. ....+++++++++
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~-~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~----~~~~~~~~~~~~~ 102 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQ-RVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHT----NSKDVFEYLSRFT 102 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEE----SCHHHHHHHHTSC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCC-ceEEEeccCCCCCccceeeccCCceEeecCCcccCC----ChHHHHHHHHHhh
Confidence 45799999999999999999999999 6999999999999999877 678875 999999998 7889999999999
Q ss_pred CccccccCCCcceEEEcCCCcccCh--hH--HHHHHH-----HHHHHHHHHhccccccchhHHHHHHhhhcCCCCCCChH
Q 010995 83 LRTCFSDYTNARYNIYDRSGKIIPS--GV--AADSYK-----KAVESAIANLKNLEATNSNIGEVIKAATELPSSPKTPL 153 (496)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~g~~~~~--~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (496)
... .+.... ....+|+.++. .. ...++. ..................++.+|+...+. ....
T Consensus 103 ~~~---~~~~~~--~~~~~g~l~~lP~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~s~~e~~~~~~G-----~~~~ 172 (397)
T 3hdq_A 103 EWR---PYQHRV--LASVDGQLLPIPINLDTVNRLYGLNLTSFQVEEFFASVAEKVEQVRTSEDVVVSKVG-----RDLY 172 (397)
T ss_dssp CEE---ECCCBE--EEEETTEEEEESCCHHHHHHHHTCCCCHHHHHHHHHHHCCCCSSCCBHHHHHHHHHH-----HHHH
T ss_pred hcc---cccccc--eEEECCEEEEcCCChHHHHHhhccCCCHHHHHHHHhhcccCCCCCcCHHHHHHHhcC-----HHHH
Confidence 532 222222 22346766442 21 111111 11111111111111112234444432110 0011
Q ss_pred HHHHHHHH-hhcc----ccccCCccc------cc-ccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCcee
Q 010995 154 ELAIDFIL-HDFE----MAEVEPIST------YV-DFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVV 221 (496)
Q Consensus 154 ~~~~~~~~-~~~~----~~~~~~~~~------~~-~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V 221 (496)
+..++.+. ..+. ..+...+.. +. .+....+...+++|+.+|+++|++. .|++|++|++|
T Consensus 173 e~~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~~l~e~l~~~---------~g~~V~l~~~v 243 (397)
T 3hdq_A 173 NKFFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGYTRMFQNMLSS---------PNIKVMLNTDY 243 (397)
T ss_dssp HHHTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCHHHHHHHHTCS---------TTEEEEESCCG
T ss_pred HHHHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCHHHHHHHHHhc---------cCCEEEECCeE
Confidence 11111111 1111 000000000 00 0101122234689999999998765 78999999999
Q ss_pred EEEEEcCCceEEEeCCCcEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEEEcCCCCCCCCCCCc
Q 010995 222 RELQHSRNGVTVKTEDGCVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFLKFPCKFWPCSPGKE 301 (496)
Q Consensus 222 ~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l~~~~~~w~~~~~~~ 301 (496)
+++ +..+.+|+||+|+|+..+.. . ....++|.+...+.+.++.+.+.. ..
T Consensus 244 ~~~-------------~~~~~~d~vI~T~P~d~~~~----~----------~~g~L~yrsl~~~~~~~~~~~~~~---~~ 293 (397)
T 3hdq_A 244 REI-------------ADFIPFQHMIYTGPVDAFFD----F----------CYGKLPYRSLEFRHETHDTEQLLP---TG 293 (397)
T ss_dssp GGT-------------TTTSCEEEEEECSCHHHHTT----T----------TTCCCCEEEEEEEEEEESSSCSCS---SS
T ss_pred Eec-------------cccccCCEEEEcCCHHHHHH----H----------hcCCCCCceEEEEEEEeccccCCC---Ce
Confidence 832 33567999999999998854 1 134678888888888898765443 23
Q ss_pred eEEeecCCCCccccc--eeccccCCCCcEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCCCCCCCCeeEecccCCC
Q 010995 302 FFIYAHERRGYYTFW--QHMENAYPGSNILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGPDIPNATDILVPRWWNN 379 (496)
Q Consensus 302 ~~~~~~~~~~~~~~~--~~~~~~~~~~~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~rw~~~ 379 (496)
++-+.+.+ ++..+. .++.....+.++++..|.....+..-..++++-.+.+.
T Consensus 294 ~vn~~d~~-p~tRi~e~k~~~~~~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~~------------------------- 347 (397)
T 3hdq_A 294 TVNYPNDY-AYTRVSEFKHITGQRHHQTSVVYEYPRAEGDPYYPVPRPENAELYK------------------------- 347 (397)
T ss_dssp EEECSSSS-SCSEEEEHHHHHCCCCSSEEEEEEEEESSSSCCEECCSHHHHHHHH-------------------------
T ss_pred EEEeCCCC-cceEEEeecccCCCCCCCEEEEEEECCCCCccccccCchhHHHHHH-------------------------
Confidence 33444443 443332 23322223566776665431111111122211111111
Q ss_pred CCCCcccCCCCCCCChHHHHHHhCCCCcEEEccccccCcCCccchHHHHHHHHHHHHHHHH
Q 010995 380 RFQRGSYSNYPIISDNQLVNSIRAPVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVEK 440 (496)
Q Consensus 380 ~~~~g~~~~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~~ 440 (496)
.+..+....+||+|+|-.-.-.| -.|+-++.+|+.+++.++..
T Consensus 348 -----------------~y~~~a~~~~~v~~~GRlg~y~Y-~~md~~i~~al~~~~~~~~~ 390 (397)
T 3hdq_A 348 -----------------KYEALADAAQDVTFVGRLATYRY-YNMDQVVAQALATFRRLQGQ 390 (397)
T ss_dssp -----------------HHHHHHHHCTTEEECSTTTTTCC-CCHHHHHHHHHHHHHHHHC-
T ss_pred -----------------HHHHHHhcCCCEEEcccceEEEe-ccHHHHHHHHHHHHHHHhcc
Confidence 11222222468999998876644 57999999999999887653
No 30
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.86 E-value=1.4e-19 Score=171.34 Aligned_cols=59 Identities=27% Similarity=0.611 Sum_probs=55.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEec
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAG 65 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~ 65 (496)
..||+|||||+|||+||+.|+++|+ +|+|||+++++||++.+.+.++..+|.|++++..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~~~~GG~~~~~~~~~~~~d~g~~~~~~ 60 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTA 60 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCGGGCEEEETTEEEECSCCCBCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCCCCCCcccccccCCceeecCcccccc
Confidence 5799999999999999999999999 6999999999999999999999999999988765
No 31
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.85 E-value=1.4e-19 Score=183.01 Aligned_cols=229 Identities=16% Similarity=0.215 Sum_probs=133.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCC-cE---------------EeecceEEecCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGG-VS---------------VELGAGWIAGVGG 68 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g-~~---------------~d~G~~~~~~~~~ 68 (496)
..+||||||||++||+||+.|+++|+ +|+|||+++++||+++|.+.+| +. ++.|.++...++.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~-~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P 88 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGK-KVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIP 88 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeecccc
Confidence 46899999999999999999999999 6999999999999999976544 11 3444444433110
Q ss_pred ---CCCChHHHHHHhcCCcccc--ccCCCcceEEEcCCCccc--ChhHHH------------HHHHHHHHHHHHHhcc--
Q 010995 69 ---KESNPVWELASKSGLRTCF--SDYTNARYNIYDRSGKII--PSGVAA------------DSYKKAVESAIANLKN-- 127 (496)
Q Consensus 69 ---~~~~~~~~l~~~lgl~~~~--~~~~~~~~~~~~~~g~~~--~~~~~~------------~~~~~~~~~~~~~~~~-- 127 (496)
.....+.++++++|+.... .... ..+ . ..+|..+ +..... ..+.++.+........
T Consensus 89 ~~l~~~~~l~~ll~~lg~~~~l~~~~~~-~~~-~-~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p 165 (453)
T 2bcg_G 89 KFLMANGELTNILIHTDVTRYVDFKQVS-GSY-V-FKQGKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDL 165 (453)
T ss_dssp CBEETTSHHHHHHHHHTGGGTCCEEECC-CEE-E-EETTEEEECCSSHHHHHHCTTSCHHHHHHHHHHHHHHHHCBTTBG
T ss_pred ceeecCcHHHHHHHhcCCccceEEEEcc-cee-E-EeCCeEEECCCChHHHHhhhccchhhHHHHHHHHHHHHHhccCCc
Confidence 0346788999999986433 1122 112 2 2455543 222111 1111222221111110
Q ss_pred -----ccccchhHHHHHHhhhcCCCCCCChHHHHHHHHHhhccccc---------cCCc---cc----ccccCCcceeee
Q 010995 128 -----LEATNSNIGEVIKAATELPSSPKTPLELAIDFILHDFEMAE---------VEPI---ST----YVDFGEREFLVA 186 (496)
Q Consensus 128 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~---~~----~~~~~~~~~~~~ 186 (496)
.+....++.+++.... .. ....+++.....+.. ...+ .. ...++.. .+.+
T Consensus 166 ~~~~~~~~~~~s~~~~l~~~~----~~----~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~-~~~~ 236 (453)
T 2bcg_G 166 STHQGLDLDKNTMDEVYYKFG----LG----NSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARYGKS-PYLY 236 (453)
T ss_dssp GGSTTCCTTTSBHHHHHHHTT----CC----HHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHHSSC-SEEE
T ss_pred hhhhccccccCCHHHHHHHhC----CC----HHHHHHHHHHHHhccCccccCCchHHHHHHHHHHHHHHHhhcCC-ceEe
Confidence 0011223445554310 00 111111111111000 0000 00 0112222 2335
Q ss_pred CcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEc--CCceE-EEeCCCcEEEcCEEEEecChH
Q 010995 187 DERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHS--RNGVT-VKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 187 ~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~--~~~v~-V~~~~G~~~~ad~VI~A~p~~ 253 (496)
+++|++.++++|++.+.+ .|++|++|++|++|..+ ++++. |.+ +|+++.||+||+|+++.
T Consensus 237 p~gG~~~l~~al~~~~~~------~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 237 PMYGLGELPQGFARLSAI------YGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp ETTCTTHHHHHHHHHHHH------TTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred eCCCHHHHHHHHHHHHHH------cCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 689999999999999877 79999999999999988 77764 666 57789999999999875
No 32
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.79 E-value=1.6e-18 Score=168.55 Aligned_cols=79 Identities=32% Similarity=0.520 Sum_probs=71.4
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC-CCCCeEEEeee----------eCCcEEeecceEEecCCCCCCC
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEAS-DRIGGRVRNEK----------FGGVSVELGAGWIAGVGGKESN 72 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~-~~~GGr~~t~~----------~~g~~~d~G~~~~~~~~~~~~~ 72 (496)
...+||+|||||++||+||+.|+++|+ +|+|||++ +++|||+.|.+ ..+..+|.|++++.. .+.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~-~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~----~~~ 116 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGH-DVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPS----FHP 116 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSC-EEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEET----TCH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCC-cEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecc----hHH
Confidence 356899999999999999999999999 79999999 99999999977 357899999999987 778
Q ss_pred hHHHHHHhcCCcccc
Q 010995 73 PVWELASKSGLRTCF 87 (496)
Q Consensus 73 ~~~~l~~~lgl~~~~ 87 (496)
.+.++++++|+....
T Consensus 117 ~~~~~~~~lGl~~~~ 131 (376)
T 2e1m_A 117 LTLALIDKLGLKRRL 131 (376)
T ss_dssp HHHHHHHHTTCCEEE
T ss_pred HHHHHHHHcCCCcce
Confidence 899999999998654
No 33
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.78 E-value=1.4e-18 Score=173.73 Aligned_cols=226 Identities=19% Similarity=0.244 Sum_probs=140.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeC--------------------CcEEeecceEEe
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFG--------------------GVSVELGAGWIA 64 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~--------------------g~~~d~G~~~~~ 64 (496)
..+||+|||+|++|+++|+.|+++|+ +|+|+|+++++||++.+.+.+ ++.+|++++.+.
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~-~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~ 97 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGK-KILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFIL 97 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCC-cEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEee
Confidence 45899999999999999999999999 699999999999999987532 468999988886
Q ss_pred cCCCCCCChHHHHHHhcCCccccccCCCcceE-EEc--------CCCccc--ChhHHH------------HHHHHHHHHH
Q 010995 65 GVGGKESNPVWELASKSGLRTCFSDYTNARYN-IYD--------RSGKII--PSGVAA------------DSYKKAVESA 121 (496)
Q Consensus 65 ~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~-~~~--------~~g~~~--~~~~~~------------~~~~~~~~~~ 121 (496)
...++.+++.++|+.... .|...... ++. .+|+.. |..... ..+.+++...
T Consensus 98 -----~~g~L~~lL~~~gv~~yl-ef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lLs~~eK~~l~kFL~~l 171 (475)
T 3p1w_A 98 -----VGGNLVKILKKTRVTNYL-EWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLLSLMEKNRCKNFYQYV 171 (475)
T ss_dssp -----TTSHHHHHHHHTTCGGGS-CEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTSCHHHHHHHHHHHHHH
T ss_pred -----cCcHHHHHHHHCCchhee-EEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCCCHHHHHHHHHHHHHH
Confidence 466899999999998765 22221111 221 134333 322111 1112222222
Q ss_pred HHHhcc-------ccccchhHHHHHHhhhcCCCCCCChHHHHHHHHHhhccccc------cC---Cc---c----ccccc
Q 010995 122 IANLKN-------LEATNSNIGEVIKAATELPSSPKTPLELAIDFILHDFEMAE------VE---PI---S----TYVDF 178 (496)
Q Consensus 122 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~---~----~~~~~ 178 (496)
...... .+....++.+|+... ..+ ....+++.....+.. .. .+ . .+..+
T Consensus 172 ~~~~~~~~~~~~~~~l~~~s~~e~l~~~----gls----~~l~~fl~~alaL~~~~~~~~~~a~~~l~ri~~y~~Sl~~y 243 (475)
T 3p1w_A 172 SEWDANKRNTWDNLDPYKLTMLEIYKHF----NLC----QLTIDFLGHAVALYLNDDYLKQPAYLTLERIKLYMQSISAF 243 (475)
T ss_dssp HHCCTTCGGGSTTCCTTTSBHHHHHHHT----TCC----HHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhccchhhhcccccCCCHHHHHHHc----CCC----HHHHHHHHHHHHhhcCCCcccCCHHHHHHHHHHHHHHHhhc
Confidence 111100 111123466676641 111 111122211110000 00 00 0 11223
Q ss_pred CCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEE-cCCceE-EEeCCCcEEEcCEEEEecCh
Q 010995 179 GEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQH-SRNGVT-VKTEDGCVYEANYVILSASI 252 (496)
Q Consensus 179 ~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~-~~~~v~-V~~~~G~~~~ad~VI~A~p~ 252 (496)
+.. .+.++++|++.|+++|++.+.+ .|++|+++++|++|.. +++++. |++.+|+++.||+||++...
T Consensus 244 g~s-~~~yp~gG~~~L~~aL~r~~~~------~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~ 312 (475)
T 3p1w_A 244 GKS-PFIYPLYGLGGIPEGFSRMCAI------NGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSY 312 (475)
T ss_dssp SSC-SEEEETTCTTHHHHHHHHHHHH------C--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGG
T ss_pred CCC-ceEEECCCHHHHHHHHHHHHHH------cCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCc
Confidence 432 3446789999999999999887 7999999999999998 666654 88988888999999999864
No 34
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.78 E-value=1.7e-19 Score=157.51 Aligned_cols=119 Identities=20% Similarity=0.274 Sum_probs=102.5
Q ss_pred cEEEEEeccccchhcccCCcHHHHHHHHHHHHHhcCCCCCCCC-ee--EecccCCCCCCCcccCCCCCCCChHHHHHHhC
Q 010995 327 NILVVTLTNGESKRVEAQPDEETLKEAMEVLQDMFGPDIPNAT-DI--LVPRWWNNRFQRGSYSNYPIISDNQLVNSIRA 403 (496)
Q Consensus 327 ~vl~~~~~~~~a~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~-~~--~~~rw~~~~~~~g~~~~~~~g~~~~~~~~~~~ 403 (496)
.+|++++.++.+..+..++++++++.++++|+++||... .+. .+ .+++|.++||+.|+|++++||....+.+.+.+
T Consensus 37 ~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~~-~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~ 115 (181)
T 2e1m_C 37 VVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRRI-EVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVR 115 (181)
T ss_dssp EEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGGG-GGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHS
T ss_pred EEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCCc-HhhccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhC
Confidence 467777777788899999999999999999999997655 444 67 89999999999999999999987677889999
Q ss_pred CCCcEEEccccccCcCCccchHHHHHHHHHHHHHHHHHhccccc
Q 010995 404 PVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVEKIRKDNER 447 (496)
Q Consensus 404 p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~~l~~~~~~ 447 (496)
|.+|||||||+++. ++||||||++||.+||++|++.++.....
T Consensus 116 p~grl~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l~~~~~~ 158 (181)
T 2e1m_C 116 PEGPVYFAGEHVSL-KHAWIEGAVETAVRAAIAVNEAPVGDTGV 158 (181)
T ss_dssp CBTTEEECSGGGTT-STTSHHHHHHHHHHHHHHHHTCCC-----
T ss_pred CCCcEEEEEHHHcC-CccCHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999996 88999999999999999999988655443
No 35
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.78 E-value=2.4e-18 Score=172.72 Aligned_cols=229 Identities=17% Similarity=0.242 Sum_probs=140.7
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeee-----e----------------CCcEEeecceE
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEK-----F----------------GGVSVELGAGW 62 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~-----~----------------~g~~~d~G~~~ 62 (496)
...+||+|||||++||+||+.|+++|+ +|+|+|+++++||+++|.+ . .++.+|+|+++
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~-~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~ 82 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGK-KVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKF 82 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCB
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcce
Confidence 346899999999999999999999999 6999999999999999987 1 34778999988
Q ss_pred EecCCCCCCChHHHHHHhcCCccccccCCCcceEEEcCCCccc--ChhHHHH------------HHHHHHHHHHHHhcc-
Q 010995 63 IAGVGGKESNPVWELASKSGLRTCFSDYTNARYNIYDRSGKII--PSGVAAD------------SYKKAVESAIANLKN- 127 (496)
Q Consensus 63 ~~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~------------~~~~~~~~~~~~~~~- 127 (496)
+.. ...+.++++++|+.... ++......+...+|..+ +...... .+.++.+........
T Consensus 83 l~~-----~~~l~~ll~~lgl~~~l-~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 156 (433)
T 1d5t_A 83 LMA-----NGQLVKMLLYTEVTRYL-DFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDEND 156 (433)
T ss_dssp EET-----TSHHHHHHHHHTGGGGC-CEEECCEEEEEETTEEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHHCCTTC
T ss_pred eec-----cchHHHHHHHcCCccce-EEEEeCceEEeeCCEEEECCCCHHHHhhCcccChhhHHHHHHHHHHHHhhcccC
Confidence 875 45788999999987543 11111111223456542 3221110 111222222111100
Q ss_pred ------ccccchhHHHHHHhhhcCCCCCCChHHHHHHHHHhhcccc------ccCCc---c---cc----cccCCcceee
Q 010995 128 ------LEATNSNIGEVIKAATELPSSPKTPLELAIDFILHDFEMA------EVEPI---S---TY----VDFGEREFLV 185 (496)
Q Consensus 128 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~---~~----~~~~~~~~~~ 185 (496)
.+....++.+++.... .. ....+++...+.+. ..... . .+ ..++.. .+.
T Consensus 157 p~~~~~~~~~~~s~~~~l~~~~-----~~---~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~g~~-~~~ 227 (433)
T 1d5t_A 157 PKTFEGVDPQNTSMRDVYRKFD-----LG---QDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKS-PYL 227 (433)
T ss_dssp GGGGTTCCTTTSBHHHHHHHTT-----CC---HHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSSSCC-SEE
T ss_pred chhccccccccCCHHHHHHHcC-----CC---HHHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhcCCC-cEE
Confidence 0111224555555410 00 11111111110000 00000 0 00 112222 244
Q ss_pred eCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChHH
Q 010995 186 ADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIGV 254 (496)
Q Consensus 186 ~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~ 254 (496)
++++|++.++++|++.+.+ .|++|++|++|++|..+++++.+...+|+++.||+||+|+|+..
T Consensus 228 ~p~gG~~~l~~~l~~~~~~------~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 228 YPLYGLGELPQGFARLSAI------YGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp EETTCTTHHHHHHHHHHHH------HTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred EeCcCHHHHHHHHHHHHHH------cCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 6689999999999998876 79999999999999998888773334778899999999998864
No 36
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.55 E-value=1.8e-13 Score=135.04 Aligned_cols=57 Identities=14% Similarity=0.123 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChHH
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIGV 254 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~ 254 (496)
...+++.|.+.+.+ .|++|+++++|++|..+++++.|++.+| ++.||+||+|+....
T Consensus 153 ~~~~~~~l~~~a~~------~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRR------NQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHH------TTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHH------CCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhH
Confidence 46788888888776 7999999999999999888888999887 899999999998754
No 37
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.48 E-value=1.4e-12 Score=129.13 Aligned_cols=39 Identities=28% Similarity=0.570 Sum_probs=35.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCe
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGG 44 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GG 44 (496)
+++||+|||||++||+||+.|+++|+ +|+|+|+++.+|.
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~-~V~v~Er~~~~~~ 41 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGL-KTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCCCCC
Confidence 45899999999999999999999999 6999999887764
No 38
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.46 E-value=1e-12 Score=135.67 Aligned_cols=57 Identities=11% Similarity=0.133 Sum_probs=45.5
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCC----ceEEEeCCC---cEEEcCEEEEecChHH
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRN----GVTVKTEDG---CVYEANYVILSASIGV 254 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~----~v~V~~~~G---~~~~ad~VI~A~p~~~ 254 (496)
..+.+.|.+.+.+ .|++|+++++|++|+.+++ +|+|++.++ .+++||+||.|.....
T Consensus 120 ~~l~~~L~~~a~~------~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 120 DKLEPILLAQARK------HGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHH------TTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHh------CCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 3455555555555 6899999999999999888 888877665 6899999999998754
No 39
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.44 E-value=1.1e-12 Score=132.15 Aligned_cols=59 Identities=22% Similarity=0.200 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCc---eeEEEEEcCCceE-EEeCCCcEEEcCEEEEecChHHH
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNK---VVRELQHSRNGVT-VKTEDGCVYEANYVILSASIGVL 255 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~---~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~A~p~~~l 255 (496)
...+++.|.+.+.+ .|++|++++ +|++|..++++|+ |++.+|+++.||.||+|+....-
T Consensus 160 ~~~~~~~L~~~a~~------~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 160 ARNALVAAAREAQR------MGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHHHHHH------TTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHh------cCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 46778888887776 799999999 9999999888988 99999888999999999988643
No 40
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.41 E-value=5.2e-12 Score=129.93 Aligned_cols=90 Identities=11% Similarity=0.010 Sum_probs=66.6
Q ss_pred eeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcC--CceE-EEeCCCcEEEcCEEEEecChHHHhcCC
Q 010995 183 FLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSR--NGVT-VKTEDGCVYEANYVILSASIGVLQSDL 259 (496)
Q Consensus 183 ~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~--~~v~-V~~~~G~~~~ad~VI~A~p~~~l~~~l 259 (496)
.+.+..+|++.|+++|++.+.. .|++|++|++|++|..++ ++++ |.+.+|+++.||+||++. ..+..
T Consensus 369 g~~yp~GG~g~L~qaL~r~~~~------~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~--~~lp~-- 438 (650)
T 1vg0_A 369 PFLFPLYGQGELPQCFCRMCAV------FGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED--SYLSE-- 438 (650)
T ss_dssp SEEEETTCTTHHHHHHHHHHHH------TTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG--GGBCT--
T ss_pred ceEEeCCchhHHHHHHHHHHHH------cCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh--hhcCH--
Confidence 3446689999999999998887 799999999999999877 6666 556779999999999832 22211
Q ss_pred cccCCCCcHHHHHHHhhCCCcceeEEEEEcCCCCC
Q 010995 260 ISFKPPLPKWKTEAIEKCDVMVYTKIFLKFPCKFW 294 (496)
Q Consensus 260 i~~~p~l~~~~~~~i~~~~~~~~~~v~l~~~~~~w 294 (496)
.. ....+++.+.++.+.++.+.-
T Consensus 439 -----~~-------~~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 439 -----NT-------CSRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp -----TT-------TTTCCCEEEEEEEEEESSCSS
T ss_pred -----hH-------hccccccceEEEEEEecCCCC
Confidence 11 112345667788888887653
No 41
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.41 E-value=4.1e-13 Score=133.40 Aligned_cols=60 Identities=15% Similarity=0.298 Sum_probs=51.2
Q ss_pred cccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChHH
Q 010995 188 ERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIGV 254 (496)
Q Consensus 188 ~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~ 254 (496)
......+.+.|.+.+.+ .|++|+++++|++|..+++++.|.+.+| +++||+||+|+....
T Consensus 128 ~~~~~~l~~~L~~~l~~------~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 128 DHSAKDIIRMLMAEMKE------AGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp SSCHHHHHHHHHHHHHH------HTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred CCCHHHHHHHHHHHHHH------CCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 34566788888887776 6999999999999999888899999888 899999999998643
No 42
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.41 E-value=4.2e-11 Score=122.10 Aligned_cols=155 Identities=18% Similarity=0.198 Sum_probs=96.8
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCC
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGL 83 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl 83 (496)
.+++||+|||||++||++|..|+++|+ +|+|+|+.+.++...+ +..+ .....++++++|+
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~-~v~vlE~~~~~~~~~r------------~~~l-------~~~~~~~l~~lGl 68 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGV-EVVVLERLVERTGESR------------GLGF-------TARTMEVFDQRGI 68 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCCC-CCCCC------------SEEE-------CHHHHHHHHTTTC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCCCCCCCC------------cceE-------CHHHHHHHHHCCC
Confidence 567899999999999999999999999 6999999876542100 1122 3456788899998
Q ss_pred ccccccCCCcceEEEcCCCcccChhHHHHHHHHHHHHHHHHhccccccchhHHHHHHhhhcCCCCCCChHHHHHHHHHhh
Q 010995 84 RTCFSDYTNARYNIYDRSGKIIPSGVAADSYKKAVESAIANLKNLEATNSNIGEVIKAATELPSSPKTPLELAIDFILHD 163 (496)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (496)
....... . ........+..+
T Consensus 69 ~~~~~~~-~-~~~~~~~~~~~~---------------------------------------------------------- 88 (500)
T 2qa1_A 69 LPRFGEV-E-TSTQGHFGGLPI---------------------------------------------------------- 88 (500)
T ss_dssp GGGGCSC-C-BCCEEEETTEEE----------------------------------------------------------
T ss_pred HHHHHhc-c-ccccccccceec----------------------------------------------------------
Confidence 7654221 0 000000000000
Q ss_pred ccccccCCcccccccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCc---E
Q 010995 164 FEMAEVEPISTYVDFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGC---V 240 (496)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~---~ 240 (496)
...... ..+. ..+... -..+.+.|.+.+.+ .|++|+++++|++|+.++++|+|++.++. +
T Consensus 89 -~~~~~~-----~~~~--~~~~i~---~~~l~~~L~~~~~~------~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~ 151 (500)
T 2qa1_A 89 -DFGVLE-----GAWQ--AAKTVP---QSVTETHLEQWATG------LGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHT 151 (500)
T ss_dssp -EGGGST-----TGGG--CEEEEE---HHHHHHHHHHHHHH------TTCEEEETCEEEEEEEETTEEEEEEEETTEEEE
T ss_pred -ccccCC-----CCCC--ceeecC---HHHHHHHHHHHHHH------CCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEE
Confidence 000000 0000 011111 23344455555544 68999999999999999999988877664 7
Q ss_pred EEcCEEEEecChHHH
Q 010995 241 YEANYVILSASIGVL 255 (496)
Q Consensus 241 ~~ad~VI~A~p~~~l 255 (496)
++||+||.|......
T Consensus 152 ~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 152 LRAAYLVGCDGGRSS 166 (500)
T ss_dssp EEESEEEECCCTTCH
T ss_pred EEeCEEEECCCcchH
Confidence 999999999887654
No 43
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.40 E-value=3.5e-12 Score=125.07 Aligned_cols=58 Identities=10% Similarity=0.063 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCc-eEEEeCCC--cEEEcCEEEEecChHH
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNG-VTVKTEDG--CVYEANYVILSASIGV 254 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~-v~V~~~~G--~~~~ad~VI~A~p~~~ 254 (496)
...+.+.|.+.+.+ .|++|+++++|++|..++++ +.|.+.+| .+++||.||+|+....
T Consensus 149 ~~~~~~~l~~~~~~------~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAES------DGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHH------TTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHH------CCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 56788888888776 79999999999999998766 88888887 4899999999998754
No 44
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.40 E-value=5.7e-11 Score=121.12 Aligned_cols=154 Identities=19% Similarity=0.204 Sum_probs=97.3
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCC
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGL 83 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl 83 (496)
...+||+|||||++||++|..|+++|+ +|+|+|+.+.++...+ +..+ .....++++++|+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~-~v~vlE~~~~~~~~~r------------~~~l-------~~~~~~~l~~lGl 69 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGV-DVMVLEQLPQRTGESR------------GLGF-------TARTMEVFDQRGI 69 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESCSSCCCCCC------------SEEE-------CHHHHHHHHHTTC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCCCCCCCCc------------eeEE-------CHHHHHHHHHCCC
Confidence 457899999999999999999999999 6999999876532100 1122 3456788999998
Q ss_pred ccccccCCCcceEEEcCCCcccChhHHHHHHHHHHHHHHHHhccccccchhHHHHHHhhhcCCCCCCChHHHHHHHHHhh
Q 010995 84 RTCFSDYTNARYNIYDRSGKIIPSGVAADSYKKAVESAIANLKNLEATNSNIGEVIKAATELPSSPKTPLELAIDFILHD 163 (496)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (496)
....... . ........+.. .
T Consensus 70 ~~~~~~~-~-~~~~~~~~~~~----------------------------~------------------------------ 89 (499)
T 2qa2_A 70 LPAFGPV-E-TSTQGHFGGRP----------------------------V------------------------------ 89 (499)
T ss_dssp GGGGCSC-C-EESEEEETTEE----------------------------E------------------------------
T ss_pred HHHHHhc-c-ccccceeccee----------------------------c------------------------------
Confidence 7655321 1 00000000000 0
Q ss_pred ccccccCCcccccccCCcce-eeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCc---
Q 010995 164 FEMAEVEPISTYVDFGEREF-LVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGC--- 239 (496)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~-~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~--- 239 (496)
..... ...... +... -..+.+.|.+.+.+ .|++|+++++|++|+.++++|+|++.++.
T Consensus 90 -~~~~~--------~~~~~~~~~i~---~~~l~~~L~~~~~~------~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~ 151 (499)
T 2qa2_A 90 -DFGVL--------EGAHYGVKAVP---QSTTESVLEEWALG------RGAELLRGHTVRALTDEGDHVVVEVEGPDGPR 151 (499)
T ss_dssp -EGGGS--------TTCCCEEEEEE---HHHHHHHHHHHHHH------TTCEEEESCEEEEEEECSSCEEEEEECSSCEE
T ss_pred -ccccC--------CCCCCceEecC---HHHHHHHHHHHHHh------CCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcE
Confidence 00000 000001 1111 23345555555544 68999999999999999999998887764
Q ss_pred EEEcCEEEEecChHHH
Q 010995 240 VYEANYVILSASIGVL 255 (496)
Q Consensus 240 ~~~ad~VI~A~p~~~l 255 (496)
+++||+||.|......
T Consensus 152 ~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 152 SLTTRYVVGCDGGRST 167 (499)
T ss_dssp EEEEEEEEECCCTTCH
T ss_pred EEEeCEEEEccCcccH
Confidence 7999999999887654
No 45
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.40 E-value=1.3e-11 Score=123.55 Aligned_cols=57 Identities=16% Similarity=0.211 Sum_probs=44.1
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCce--EEEeCCCc--EEEcCEEEEecChHH
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGV--TVKTEDGC--VYEANYVILSASIGV 254 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v--~V~~~~G~--~~~ad~VI~A~p~~~ 254 (496)
..+.+.|.+.+.+ .|++|+++++|++|..+++++ .|.+.+|+ +++||.||.|.....
T Consensus 106 ~~~~~~L~~~a~~------~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 106 GNFDKTLADEAAR------QGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHH------HTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHHh------CCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 3455555555554 699999999999999987764 46678886 699999999998754
No 46
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.38 E-value=8.8e-12 Score=123.70 Aligned_cols=153 Identities=20% Similarity=0.284 Sum_probs=99.6
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHh
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASK 80 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~ 80 (496)
|+ ...+||+|||||++||++|..|+++|+ +|+|+|+++.+.. . .|... . ..+...+++++
T Consensus 1 M~-~~~~~V~IVGaG~aGl~~A~~L~~~G~-~v~v~E~~~~~~~-----~-------~~~g~-~-----l~~~~~~~l~~ 60 (397)
T 2vou_A 1 MS-PTTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSPQPLS-----G-------FGTGI-V-----VQPELVHYLLE 60 (397)
T ss_dssp -C-CCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSSCC-----C-------CSCEE-E-----CCHHHHHHHHH
T ss_pred CC-CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEecCCCCCC-----c-------ccccc-c-----cChhHHHHHHH
Confidence 54 356899999999999999999999999 7999999875311 0 01111 1 23467788999
Q ss_pred cCCccccccCCCcceEEEcC-CCcccChhHHHHHHHHHHHHHHHHhccccccchhHHHHHHhhhcCCCCCCChHHHHHHH
Q 010995 81 SGLRTCFSDYTNARYNIYDR-SGKIIPSGVAADSYKKAVESAIANLKNLEATNSNIGEVIKAATELPSSPKTPLELAIDF 159 (496)
Q Consensus 81 lgl~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (496)
+|+.............++.. +|..+..
T Consensus 61 ~g~~~~~~~~~~~~~~~~~~~~g~~~~~---------------------------------------------------- 88 (397)
T 2vou_A 61 QGVELDSISVPSSSMEYVDALTGERVGS---------------------------------------------------- 88 (397)
T ss_dssp TTCCGGGTCBCCCEEEEEETTTCCEEEE----------------------------------------------------
T ss_pred cCCccccccccccceEEEecCCCCcccc----------------------------------------------------
Confidence 99865111111111222222 2221000
Q ss_pred HHhhccccccCCcccccccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCc
Q 010995 160 ILHDFEMAEVEPISTYVDFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGC 239 (496)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~ 239 (496)
..... .. .....+.+.|.+.+ .|++|+++++|++|+.++++|+|++.+|+
T Consensus 89 ----------------~~~~~--~~----~~~~~l~~~L~~~~--------~~~~i~~~~~v~~i~~~~~~v~v~~~~g~ 138 (397)
T 2vou_A 89 ----------------VPADW--RF----TSYDSIYGGLYELF--------GPERYHTSKCLVGLSQDSETVQMRFSDGT 138 (397)
T ss_dssp ----------------EECCC--CE----EEHHHHHHHHHHHH--------CSTTEETTCCEEEEEECSSCEEEEETTSC
T ss_pred ----------------ccCcc--cc----cCHHHHHHHHHHhC--------CCcEEEcCCEEEEEEecCCEEEEEECCCC
Confidence 00000 00 12345666666654 47899999999999999899999999998
Q ss_pred EEEcCEEEEecChHHH
Q 010995 240 VYEANYVILSASIGVL 255 (496)
Q Consensus 240 ~~~ad~VI~A~p~~~l 255 (496)
+++||.||.|......
T Consensus 139 ~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 139 KAEANWVIGADGGASV 154 (397)
T ss_dssp EEEESEEEECCCTTCH
T ss_pred EEECCEEEECCCcchh
Confidence 9999999999987554
No 47
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.36 E-value=9.8e-12 Score=123.83 Aligned_cols=158 Identities=23% Similarity=0.234 Sum_probs=98.9
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCC
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGL 83 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl 83 (496)
.+++||+|||||++||++|+.|+++|+ +|+|+|+.+.++.... +.. -.....++++++|+
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~E~~~~~~~~~~------------~~~-------l~~~~~~~l~~lg~ 80 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGI-DCDVYEAVKEIKPVGA------------AIS-------VWPNGVKCMAHLGM 80 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSCC----C------------EEE-------ECHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCCCCCCcCe------------eEE-------ECHHHHHHHHHCCC
Confidence 456899999999999999999999999 7999999876532111 111 12356778888888
Q ss_pred cccccc--CCCcceEEEcCC-CcccChhHHHHHHHHHHHHHHHHhccccccchhHHHHHHhhhcCCCCCCChHHHHHHHH
Q 010995 84 RTCFSD--YTNARYNIYDRS-GKIIPSGVAADSYKKAVESAIANLKNLEATNSNIGEVIKAATELPSSPKTPLELAIDFI 160 (496)
Q Consensus 84 ~~~~~~--~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (496)
...... .......++..+ |..+..- ....+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~-------------------------~~~~~~~~------------------- 116 (407)
T 3rp8_A 81 GDIMETFGGPLRRMAYRDFRSGENMTQF-------------------------SLAPLIER------------------- 116 (407)
T ss_dssp HHHHHHHSCCCCEEEEEETTTCCEEEEE-------------------------ECHHHHHH-------------------
T ss_pred HHHHHhhcCCCcceEEEECCCCCEeEEe-------------------------cchhhhhh-------------------
Confidence 644321 111112233333 3321100 00000000
Q ss_pred HhhccccccCCcccccccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcE
Q 010995 161 LHDFEMAEVEPISTYVDFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCV 240 (496)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~ 240 (496)
++...+.+ .-..+.+.|.+.+. . ++|+++++|++|+.++++|+|++.+|++
T Consensus 117 -----------------~~~~~~~i----~r~~l~~~L~~~~~-------~-~~i~~~~~v~~i~~~~~~v~v~~~~g~~ 167 (407)
T 3rp8_A 117 -----------------TGSRPCPV----SRAELQREMLDYWG-------R-DSVQFGKRVTRCEEDADGVTVWFTDGSS 167 (407)
T ss_dssp -----------------HSSCCEEE----EHHHHHHHHHHHHC-------G-GGEEESCCEEEEEEETTEEEEEETTSCE
T ss_pred -----------------cCCceEEE----EHHHHHHHHHHhCC-------c-CEEEECCEEEEEEecCCcEEEEEcCCCE
Confidence 00111111 13456666666653 2 6899999999999999999999999999
Q ss_pred EEcCEEEEecChHH
Q 010995 241 YEANYVILSASIGV 254 (496)
Q Consensus 241 ~~ad~VI~A~p~~~ 254 (496)
++||.||.|.....
T Consensus 168 ~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 168 ASGDLLIAADGSHS 181 (407)
T ss_dssp EEESEEEECCCTTC
T ss_pred EeeCEEEECCCcCh
Confidence 99999999987754
No 48
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.36 E-value=2.2e-11 Score=125.97 Aligned_cols=157 Identities=18% Similarity=0.171 Sum_probs=94.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCCc
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGLR 84 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl~ 84 (496)
..+||+|||||++||++|+.|+++|+ +|+|||+.+.++.. + .+. .-.....++++++|+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~-~V~VlEr~~~~~~~-------~-----r~~-------~l~~~s~~~l~~lGl~ 107 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGV-GALVLEKLVEPVGH-------D-----RAG-------ALHIRTVETLDLRGLL 107 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTC-CEEEEBSCSSCCCS-------S-----SCC-------CBCHHHHHHHHTTTCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEcCCCCCCCC-------c-----eEE-------EECHHHHHHHHHcCCh
Confidence 45799999999999999999999999 69999998765310 0 001 1334567888888886
Q ss_pred cccccCCCcceEEEcCCCcccChhHHHHHHHHHHHHHHHHhccccccchhHHHHHHhhhcCCCCCCChHHHHHHHHHhhc
Q 010995 85 TCFSDYTNARYNIYDRSGKIIPSGVAADSYKKAVESAIANLKNLEATNSNIGEVIKAATELPSSPKTPLELAIDFILHDF 164 (496)
Q Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (496)
......... ..+..+. .......
T Consensus 108 ~~l~~~~~~------~~~~~~~--------------------~~~~~~~------------------------------- 130 (570)
T 3fmw_A 108 DRFLEGTQV------AKGLPFA--------------------GIFTQGL------------------------------- 130 (570)
T ss_dssp HHHTTSCCB------CSBCCBT--------------------TBCTTCC-------------------------------
T ss_pred HHHHhcCcc------cCCceeC--------------------Ccccccc-------------------------------
Confidence 554221110 0000000 0000000
Q ss_pred cccccCCcccccccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEe--CCC-cEE
Q 010995 165 EMAEVEPISTYVDFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKT--EDG-CVY 241 (496)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~--~~G-~~~ 241 (496)
...... ....+.... .-..+.+.|.+.+.+ .|++|+++++|++|+.++++|+|++ .+| +++
T Consensus 131 ~~~~~~--------~~~~~~~~i--~~~~l~~~L~~~a~~------~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~ 194 (570)
T 3fmw_A 131 DFGLVD--------TRHPYTGLV--PQSRTEALLAEHARE------AGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPV 194 (570)
T ss_dssp BGGGSC--------CSCCSBBCC--CHHHHHHHHHHHHHH------HTEECCBSCEEEECCBCSSCEEEEEEETTEEEEE
T ss_pred cccccC--------CCCCeeEEe--CHHHHHHHHHHHHHh------CCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEE
Confidence 000000 000000001 133455555555544 6899999999999999998888877 677 689
Q ss_pred EcCEEEEecChHH
Q 010995 242 EANYVILSASIGV 254 (496)
Q Consensus 242 ~ad~VI~A~p~~~ 254 (496)
+||+||.|.....
T Consensus 195 ~a~~vV~ADG~~S 207 (570)
T 3fmw_A 195 RARYGVGCDGGRS 207 (570)
T ss_dssp EESEEEECSCSSC
T ss_pred EeCEEEEcCCCCc
Confidence 9999999988654
No 49
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.35 E-value=2e-11 Score=121.62 Aligned_cols=46 Identities=17% Similarity=0.255 Sum_probs=38.7
Q ss_pred cccceeeCceeEEEEEcC-CceEEEeCCCcEEEcCEEEEecChHHHh
Q 010995 211 LDNRLKLNKVVRELQHSR-NGVTVKTEDGCVYEANYVILSASIGVLQ 256 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~-~~v~V~~~~G~~~~ad~VI~A~p~~~l~ 256 (496)
.+.+|+++++|++++..+ ++|+|++.||++++||.||-|-..+...
T Consensus 122 ~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 168 (412)
T 4hb9_A 122 LANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNSKV 168 (412)
T ss_dssp CTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTCHH
T ss_pred ccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcch
Confidence 456899999999998765 4688999999999999999998775443
No 50
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.32 E-value=3.4e-11 Score=127.67 Aligned_cols=58 Identities=9% Similarity=0.013 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChHH
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIGV 254 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~ 254 (496)
...++..|.+.+.+ .|++|+++++|++|..++++|.|++.+|.++.||.||+|+....
T Consensus 416 p~~l~~aL~~~a~~------~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 416 PAELTRNVLELAQQ------QGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHH------TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHHh------CCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch
Confidence 46778888887776 69999999999999999999999998887899999999998763
No 51
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.32 E-value=7e-11 Score=117.11 Aligned_cols=57 Identities=11% Similarity=0.017 Sum_probs=44.1
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceE-EEe---CCCcEEEcCEEEEecChHH
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVT-VKT---EDGCVYEANYVILSASIGV 254 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~-V~~---~~G~~~~ad~VI~A~p~~~ 254 (496)
..+.+.|.+.+.+ .|++|+++++|++|..++++++ |++ .++.+++||.||.|.....
T Consensus 102 ~~l~~~L~~~~~~------~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 102 DKFDKHLAALAAK------AGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHH------HTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHh------CCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 3455556555554 6999999999999999888876 766 3456899999999998654
No 52
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.32 E-value=1.4e-10 Score=120.20 Aligned_cols=61 Identities=34% Similarity=0.390 Sum_probs=46.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCCc
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGLR 84 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl~ 84 (496)
+.+||+|||||++||++|+.|+++|+ +|+|+|+.+.+++.+ |. . ..+....+++.+|+.
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~-~V~LiEr~~~~~~~~------------G~----~----l~p~~~~~l~~lGl~ 80 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGH-DVTIYERSAFPRYRV------------GE----S----LLPGTMSILNRLGLQ 80 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCSSCCCC------------CC----B----CCHHHHHHHHHTTCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCC-CEEEEcCCCCCCCce------------ee----e----ECHHHHHHHHHcCCc
Confidence 45899999999999999999999999 799999986554311 11 1 334567788888885
Q ss_pred cc
Q 010995 85 TC 86 (496)
Q Consensus 85 ~~ 86 (496)
..
T Consensus 81 ~~ 82 (591)
T 3i3l_A 81 EK 82 (591)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 53
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.30 E-value=7.4e-12 Score=123.58 Aligned_cols=57 Identities=16% Similarity=0.121 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceE-EEeCCCcEEEcCEEEEecChHH
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVT-VKTEDGCVYEANYVILSASIGV 254 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~A~p~~~ 254 (496)
...+.+.|.+.+.+ .|++|+++++|++|..+++++. |++.+| +++||.||+|+....
T Consensus 148 ~~~l~~~l~~~~~~------~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKE------YGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHH------TTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHH------CCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 46677777777766 7999999999999999888888 888877 899999999998754
No 54
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.30 E-value=3.7e-11 Score=119.20 Aligned_cols=164 Identities=22% Similarity=0.267 Sum_probs=100.7
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHh
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASK 80 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~ 80 (496)
|+..+.+||+|||||++||++|+.|+++|+ +|+|+|+++.++.+. .|..+. . ...+..+++++
T Consensus 21 M~~~~~~dV~IVGaG~aGl~~A~~L~~~G~-~v~v~E~~~~~~~~~-----------~g~~~~-~----~~~~~~~~l~~ 83 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVGLTMAKLLQQNGI-DVSVYERDNDREARI-----------FGGTLD-L----HKGSGQEAMKK 83 (398)
T ss_dssp --CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEECSSSTTCCC-----------CSCCEE-C----CTTTHHHHHHH
T ss_pred ccccCCCCEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCCCccccc-----------cCCeee-e----CCccHHHHHHh
Confidence 444567899999999999999999999999 799999988765431 111111 1 11234667778
Q ss_pred cCCccccccCCC-cceEEEcCCCcccChhHHHHHHHHHHHHHHHHhccccccchhHHHHHHhhhcCCCCCCChHHHHHHH
Q 010995 81 SGLRTCFSDYTN-ARYNIYDRSGKIIPSGVAADSYKKAVESAIANLKNLEATNSNIGEVIKAATELPSSPKTPLELAIDF 159 (496)
Q Consensus 81 lgl~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (496)
+|+......... ....++..+|..+... ..+
T Consensus 84 ~gl~~~~~~~~~~~~~~~~~~~g~~~~~~--------------------------------------~~~---------- 115 (398)
T 2xdo_A 84 AGLLQTYYDLALPMGVNIADEKGNILSTK--------------------------------------NVK---------- 115 (398)
T ss_dssp TTCHHHHHHHCBCCCEEEECSSSEEEEEC--------------------------------------CCG----------
T ss_pred cChHHHHHHhhcccceEEECCCCCchhhc--------------------------------------ccc----------
Confidence 887544311100 0002333333321000 000
Q ss_pred HHhhccccccCCcccccccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCc
Q 010995 160 ILHDFEMAEVEPISTYVDFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGC 239 (496)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~ 239 (496)
.. .... ... + .-..+.+.|.+.+. +++|+++++|++|+.++++|+|++.+|+
T Consensus 116 ------------~~--~~~~-~~~-i----~r~~l~~~L~~~~~--------~~~i~~~~~v~~i~~~~~~v~v~~~~g~ 167 (398)
T 2xdo_A 116 ------------PE--NRFD-NPE-I----NRNDLRAILLNSLE--------NDTVIWDRKLVMLEPGKKKWTLTFENKP 167 (398)
T ss_dssp ------------GG--TTSS-CCE-E----CHHHHHHHHHHTSC--------TTSEEESCCEEEEEECSSSEEEEETTSC
T ss_pred ------------cc--CCCC-Cce-E----CHHHHHHHHHhhcC--------CCEEEECCEEEEEEECCCEEEEEECCCc
Confidence 00 0000 001 1 13456666666642 4689999999999998888999999998
Q ss_pred EEEcCEEEEecChHHHhc
Q 010995 240 VYEANYVILSASIGVLQS 257 (496)
Q Consensus 240 ~~~ad~VI~A~p~~~l~~ 257 (496)
+++||.||.|.......+
T Consensus 168 ~~~ad~vV~AdG~~S~vR 185 (398)
T 2xdo_A 168 SETADLVILANGGMSKVR 185 (398)
T ss_dssp CEEESEEEECSCTTCSCC
T ss_pred EEecCEEEECCCcchhHH
Confidence 899999999998865433
No 55
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.28 E-value=4.1e-11 Score=127.24 Aligned_cols=58 Identities=9% Similarity=-0.023 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCc-EEEcCEEEEecChHH
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGC-VYEANYVILSASIGV 254 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~-~~~ad~VI~A~p~~~ 254 (496)
...+++.|.+.+.+ .|++|+++++|++|..++++|.|.+.+|+ +++||.||+|++...
T Consensus 411 p~~l~~aL~~~a~~------~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 411 PSDLTHALMMLAQQ------NGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHH------TTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHHh------CCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcch
Confidence 46788888887776 69999999999999999888999998887 899999999998863
No 56
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.27 E-value=1.6e-11 Score=121.98 Aligned_cols=59 Identities=15% Similarity=0.173 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhhccCCCCCcc-ccceeeCceeEEEEEcCCce--EEEeCCCcEEEcCEEEEecChHHH
Q 010995 191 YAHLLYKMAEEFLSTSDGKIL-DNRLKLNKVVRELQHSRNGV--TVKTEDGCVYEANYVILSASIGVL 255 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~-g~~i~~~~~V~~I~~~~~~v--~V~~~~G~~~~ad~VI~A~p~~~l 255 (496)
-..+.+.|.+.+.+ . |++|+++++|++|+.++++| .|++.+|++++||.||.|......
T Consensus 106 r~~l~~~L~~~~~~------~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 106 CESLRRLVLEKIDG------EATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHHHHHHHHTT------CTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhhh------cCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChH
Confidence 34567777777665 4 89999999999999998888 899988889999999999987543
No 57
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.27 E-value=1.3e-11 Score=124.30 Aligned_cols=59 Identities=15% Similarity=0.191 Sum_probs=49.2
Q ss_pred cHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCc-eEEEeCCCcEEEcCEEEEecChHH
Q 010995 190 GYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNG-VTVKTEDGCVYEANYVILSASIGV 254 (496)
Q Consensus 190 G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~A~p~~~ 254 (496)
....+.+.|.+.+.+ .|++|+++++|++|..++++ +.|++.+|++++||.||+|+....
T Consensus 132 ~~~~l~~~L~~~~~~------~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 132 KAQSVVDALLTRLKD------LGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp CHHHHHHHHHHHHHH------TTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred CHHHHHHHHHHHHHH------CCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 356788888888776 79999999999999987777 668888887799999999987543
No 58
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.27 E-value=2.3e-11 Score=119.53 Aligned_cols=57 Identities=25% Similarity=0.268 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChHH
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIGV 254 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~ 254 (496)
...+++.|.+.+.+ .|++|+++++|++|+.+++++.|++.+| ++.||.||+|++...
T Consensus 148 ~~~l~~~l~~~~~~------~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 148 SELAIKTWIQLAKE------AGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHHH------TTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHHH------CCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccH
Confidence 35677777777766 6999999999999999888888988887 699999999998764
No 59
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.27 E-value=7.7e-11 Score=120.82 Aligned_cols=58 Identities=7% Similarity=0.063 Sum_probs=44.1
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCce---EEEeCCCc--EEEcCEEEEecChHHH
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGV---TVKTEDGC--VYEANYVILSASIGVL 255 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v---~V~~~~G~--~~~ad~VI~A~p~~~l 255 (496)
..+.+.|.+.+.+ .|++|+++++|++|..+++++ .+.+.+|+ +++||.||.|......
T Consensus 111 ~~l~~~L~~~a~~------~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 111 ARFDDMLLRNSER------KGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp HHHHHHHHHHHHH------TTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCS
T ss_pred HHHHHHHHHHHHh------CCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchH
Confidence 3455556555554 699999999999999988764 45556674 7999999999988643
No 60
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.23 E-value=9e-11 Score=116.00 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=48.0
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChHH
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIGV 254 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~ 254 (496)
..+++.|.+.+.+ .|++|+++++|++|+.+++++.|++.+| +++||.||+|+....
T Consensus 150 ~~~~~~l~~~~~~------~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEA------RGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHH------TTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHH------CCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH
Confidence 5677788877766 6999999999999999888888888776 899999999998754
No 61
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.22 E-value=2e-10 Score=113.84 Aligned_cols=56 Identities=25% Similarity=0.293 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
...+.+.|.+.+.+ .|++|+++++|++|..++++|.|.+.+| +++||.||+|+...
T Consensus 152 ~~~~~~~l~~~a~~------~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 152 VRGTLAALFTLAQA------AGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHHH------TTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHH------cCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence 35567777776665 6999999999999999888888888776 89999999999864
No 62
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.21 E-value=2.1e-11 Score=121.29 Aligned_cols=57 Identities=21% Similarity=0.176 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCce-EEEeCCCcEEEcCEEEEecChHH
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGV-TVKTEDGCVYEANYVILSASIGV 254 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~A~p~~~ 254 (496)
...+.+.|.+.+.+ .|++|+++++|++|..+++++ .|++.+| ++.||.||+|+....
T Consensus 173 ~~~~~~~l~~~~~~------~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 173 HDHVAWAFARKANE------MGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHH------TTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHH------CCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 34677778777766 699999999999999887764 5888887 799999999998743
No 63
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.20 E-value=2e-11 Score=120.79 Aligned_cols=58 Identities=9% Similarity=0.161 Sum_probs=47.1
Q ss_pred cHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEc----CCceEEEeCCCcEEEcCEEEEecChHH
Q 010995 190 GYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHS----RNGVTVKTEDGCVYEANYVILSASIGV 254 (496)
Q Consensus 190 G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~----~~~v~V~~~~G~~~~ad~VI~A~p~~~ 254 (496)
....+.+.|.+.+.+ .|++|+++++|++|..+ ++++.|++.+| +++||+||+|+....
T Consensus 107 ~~~~l~~~L~~~~~~------~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSECDK------YGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHHHH------HTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHHH------CCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 356677777777665 69999999999999987 66788888776 899999999996543
No 64
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.20 E-value=1.7e-10 Score=113.73 Aligned_cols=55 Identities=15% Similarity=0.114 Sum_probs=47.6
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
..+.+.|.+.+.+ .|++|+++++|++|..++++|.|++.+| ++.||.||+|++..
T Consensus 164 ~~~~~~l~~~~~~------~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 164 YFVCKAYVKAAKM------LGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVW 218 (382)
T ss_dssp HHHHHHHHHHHHH------TTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHH------CCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChh
Confidence 5677778777766 6999999999999999888888888777 89999999999874
No 65
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.20 E-value=6.2e-11 Score=122.48 Aligned_cols=58 Identities=19% Similarity=0.069 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceE-EEeCC---C--cEEEcCEEEEecChHH
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVT-VKTED---G--CVYEANYVILSASIGV 254 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~-V~~~~---G--~~~~ad~VI~A~p~~~ 254 (496)
-..+...|++.+.+ .|++|+++++|++|..+++++. |++.+ | .+++||.||+|+.+..
T Consensus 169 ~~~l~~~L~~~a~~------~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVA------RGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHH------TTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHH------cCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 46678888877766 7999999999999999888754 65543 3 4789999999998754
No 66
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.17 E-value=1.8e-10 Score=113.55 Aligned_cols=150 Identities=17% Similarity=0.226 Sum_probs=94.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCCc
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGLR 84 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl~ 84 (496)
+.+||+|||||++||++|+.|+++|+ +|+|+|+++.+++. + .+..+. ....++++++|+.
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~-~v~viE~~~~~~~~-------~-----~~~~l~-------~~~~~~l~~~g~~ 69 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGW-DVRLHEKSSELRAF-------G-----AGIYLW-------HNGLRVLEGLGAL 69 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSCCCC-------S-----SEEEEE-------HHHHHHHHHTTCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEecCCCCCCC-------C-----ceEEeC-------ccHHHHHHHcCCH
Confidence 35799999999999999999999999 79999998876541 1 111222 3456777888875
Q ss_pred cccccCCC--cceEEEcCCCcccChhHHHHHHHHHHHHHHHHhccccccchhHHHHHHhhhcCCCCCCChHHHHHHHHHh
Q 010995 85 TCFSDYTN--ARYNIYDRSGKIIPSGVAADSYKKAVESAIANLKNLEATNSNIGEVIKAATELPSSPKTPLELAIDFILH 162 (496)
Q Consensus 85 ~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (496)
........ ....++.. |..+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~-g~~~~-------------------------------------------------------- 92 (379)
T 3alj_A 70 DDVLQGSHTPPTYETWMH-NKSVS-------------------------------------------------------- 92 (379)
T ss_dssp HHHHTTCBCCSCEEEEET-TEEEE--------------------------------------------------------
T ss_pred HHHHhhCCCccceEEEeC-Cceee--------------------------------------------------------
Confidence 44321110 01112211 21100
Q ss_pred hccccccCCcccccccCCcceeeeCcccHHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEE
Q 010995 163 DFEMAEVEPISTYVDFGEREFLVADERGYAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYE 242 (496)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ 242 (496)
.+...+. ..+.. .-..+.+.|.+.+.+ .|++|+++++|++|+. ++ .|++.+|++++
T Consensus 93 -----------~~~~~~~-~~~~~---~r~~l~~~L~~~~~~------~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ 148 (379)
T 3alj_A 93 -----------KETFNGL-PWRIM---TRSHLHDALVNRARA------LGVDISVNSEAVAADP--VG-RLTLQTGEVLE 148 (379)
T ss_dssp -----------EECGGGC-CEEEE---EHHHHHHHHHHHHHH------TTCEEESSCCEEEEET--TT-EEEETTSCEEE
T ss_pred -----------eccCCCC-ceEEE---CHHHHHHHHHHHHHh------cCCEEEeCCEEEEEEe--CC-EEEECCCCEEE
Confidence 0000000 11111 124455556565554 6899999999999987 34 78888888999
Q ss_pred cCEEEEecChHHH
Q 010995 243 ANYVILSASIGVL 255 (496)
Q Consensus 243 ad~VI~A~p~~~l 255 (496)
||.||.|......
T Consensus 149 ad~vV~AdG~~s~ 161 (379)
T 3alj_A 149 ADLIVGADGVGSK 161 (379)
T ss_dssp CSEEEECCCTTCH
T ss_pred cCEEEECCCccHH
Confidence 9999999987543
No 67
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.16 E-value=1.1e-10 Score=126.60 Aligned_cols=57 Identities=25% Similarity=0.204 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceE-EEeCCCcEEEcCEEEEecChHH
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVT-VKTEDGCVYEANYVILSASIGV 254 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~A~p~~~ 254 (496)
...++..|.+.+.+ .|++|+++++|++|..+++++. |.+.+| +++||+||+|+....
T Consensus 150 p~~l~~~L~~~a~~------~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTES------AGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHH------TTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHH------cCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 45678888887776 7999999999999999888764 888777 899999999998764
No 68
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.13 E-value=1.8e-10 Score=117.57 Aligned_cols=58 Identities=17% Similarity=0.323 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceE-EEeCCCcEEEcCEEEEecChHH
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVT-VKTEDGCVYEANYVILSASIGV 254 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~A~p~~~ 254 (496)
...+.+.|.+.+.+ .|++|+++++|++|..+++++. |++.+|+++.||.||+|+....
T Consensus 219 ~~~l~~~L~~~l~~------~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 219 LVTMIEKMRATIIE------LGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHH------TTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHHh------cCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 45677788777776 7999999999999999888766 8888998999999999998754
No 69
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.13 E-value=4.7e-10 Score=116.16 Aligned_cols=57 Identities=16% Similarity=0.050 Sum_probs=43.9
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceE-EEeC---CC--cEEEcCEEEEecChHH
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVT-VKTE---DG--CVYEANYVILSASIGV 254 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~-V~~~---~G--~~~~ad~VI~A~p~~~ 254 (496)
..++..+++.+.+ .|++|+++++|++|..+++++. |++. +| .++.||.||+|+.+..
T Consensus 188 ~~l~~~l~~~a~~------~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAAE------DGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHH------TTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHH------cCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 4567777776665 7999999999999999887643 5532 23 3789999999998764
No 70
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.13 E-value=6.4e-12 Score=101.41 Aligned_cols=105 Identities=11% Similarity=0.198 Sum_probs=67.0
Q ss_pred cEEEcCEEEEecChHHHhcCCcccCCCCcHHHHHHHhhCCCcceeEEEEEcCCCCCCCCCCCceEEeecCCCCcccccee
Q 010995 239 CVYEANYVILSASIGVLQSDLISFKPPLPKWKTEAIEKCDVMVYTKIFLKFPCKFWPCSPGKEFFIYAHERRGYYTFWQH 318 (496)
Q Consensus 239 ~~~~ad~VI~A~p~~~l~~~li~~~p~l~~~~~~~i~~~~~~~~~~v~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 318 (496)
++++||+||+|+|+++++. |.|.|+||..+.++++.++++...|+++.|+++||++.. . .+ ...
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~--I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~---~-------~g----d~s 67 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRF--VKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTE---A-------DW----KRE 67 (130)
T ss_dssp EEEEESEEEECSCHHHHTT--SEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCH---H-------HH----HHH
T ss_pred eEEEcCEEEEcCCHHHHhc--CcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCC---c-------cc----ccc
Confidence 4789999999999999986 889999999999999999999999999999999997621 0 00 000
Q ss_pred ccccCCCCcEEEEEec-cccchhcccCCcHHHHHHHHHHHHHhcC
Q 010995 319 MENAYPGSNILVVTLT-NGESKRVEAQPDEETLKEAMEVLQDMFG 362 (496)
Q Consensus 319 ~~~~~~~~~vl~~~~~-~~~a~~~~~~~~ee~~~~~~~~L~~~~~ 362 (496)
..+ ...++++++.. ++.+..|..+++ |.++.++..|.++++
T Consensus 68 ~~~--~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p 109 (130)
T 2e1m_B 68 LDA--IAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHP 109 (130)
T ss_dssp HHH--HSTTHHHHHHHHCCCSCCCC--------------------
T ss_pred CCC--CCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCC
Confidence 111 12236666663 888889988877 557888888999885
No 71
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.13 E-value=2e-09 Score=111.69 Aligned_cols=39 Identities=31% Similarity=0.589 Sum_probs=35.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHC------CCCcEEEEeeCCCCCeE
Q 010995 6 RSPVIIIGAGVSGISAGKILAEN------GIEDILILEASDRIGGR 45 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~------G~~~V~vlEa~~~~GGr 45 (496)
.+||+|||||++||+||+.|+++ |+ +|+|+|+.+.+|+.
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~-~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDL-RVCLVEKAAHIGAH 79 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCC-CEEEECSSSSTTTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCC-cEEEEeCCCCCCCc
Confidence 47999999999999999999999 99 69999999888764
No 72
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.13 E-value=1e-10 Score=120.10 Aligned_cols=48 Identities=29% Similarity=0.459 Sum_probs=40.5
Q ss_pred CCCEEEECCCHHHHHHHHHHH-HCCCCcEEEEeeCCCCCeEEEeeeeCCc
Q 010995 6 RSPVIIIGAGVSGISAGKILA-ENGIEDILILEASDRIGGRVRNEKFGGV 54 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~-~~G~~~V~vlEa~~~~GGr~~t~~~~g~ 54 (496)
.+||+|||||++||+||+.|+ +.|+ +|+|+|+++.+||.....+.+|.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~-~v~viE~~~~~GGtw~~~~ypg~ 56 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGL-TTVGFDKADGPGGTWYWNRYPGA 56 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC-CEEEEESSSSSCTHHHHCCCTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCC-CEEEEECCCCCCCcccccCCCCc
Confidence 479999999999999999999 9999 79999999999985543333443
No 73
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.12 E-value=2.4e-10 Score=113.83 Aligned_cols=62 Identities=31% Similarity=0.477 Sum_probs=46.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCc-EEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIED-ILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGL 83 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~-V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl 83 (496)
..+||+|||||++||++|..|+++|+ + |+|+|+++.++.. |.. +. -.+...++++++|+
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~-~~v~v~E~~~~~~~~-------------g~g-~~-----l~~~~~~~l~~lg~ 62 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGI-GKVTLLESSSEIRPL-------------GVG-IN-----IQPAAVEALAELGL 62 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESSSSCCCC-------------SCE-EE-----ECHHHHHHHHHTTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCC-CeEEEEECCCCcccc-------------eeE-EE-----EChHHHHHHHHCCC
Confidence 36899999999999999999999999 8 9999998776421 111 11 13356778888887
Q ss_pred ccc
Q 010995 84 RTC 86 (496)
Q Consensus 84 ~~~ 86 (496)
...
T Consensus 63 ~~~ 65 (410)
T 3c96_A 63 GPA 65 (410)
T ss_dssp HHH
T ss_pred hHH
Confidence 543
No 74
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.11 E-value=9.4e-11 Score=120.65 Aligned_cols=41 Identities=27% Similarity=0.518 Sum_probs=37.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEE
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVR 47 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~ 47 (496)
.+||+|||||++||+||+.|++.|+ +|+|+|+++.+||...
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~-~v~iiE~~~~~GGtw~ 61 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGL-TVRAFEAASGVGGVWY 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCTHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCC-CEEEEeCCCCCCCccc
Confidence 4699999999999999999999999 7999999999998443
No 75
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.10 E-value=9.5e-10 Score=112.58 Aligned_cols=40 Identities=33% Similarity=0.605 Sum_probs=37.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGR 45 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr 45 (496)
..+||||||||++||+||+.|+++|. +|+|||+.+.+||.
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~-~V~vlEk~~~~GG~ 79 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGA-DVLVLERTSGWGGA 79 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCCCCCCc
Confidence 35799999999999999999999999 69999999999884
No 76
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.10 E-value=1.3e-09 Score=113.21 Aligned_cols=40 Identities=28% Similarity=0.594 Sum_probs=37.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGR 45 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr 45 (496)
..+||+|||||++||+||+.|+++|. +|+|||+.+.+||.
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~-~V~vlEk~~~~gg~ 164 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGA-KVILIEKEPVIGGN 164 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCCCCCCc
Confidence 35899999999999999999999999 69999999998874
No 77
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.10 E-value=1.4e-10 Score=119.55 Aligned_cols=41 Identities=32% Similarity=0.511 Sum_probs=37.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
..+||+|||||++||+||+.|+++|+ +|+|+|+++.+||..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~v~iiE~~~~~GG~w 55 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGR-SVHVIETAGDVGGVW 55 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCTHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCC-CEEEEeCCCCCCCcc
Confidence 35799999999999999999999999 699999999999843
No 78
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.10 E-value=2.7e-10 Score=117.67 Aligned_cols=67 Identities=24% Similarity=0.323 Sum_probs=49.0
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHh
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASK 80 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~ 80 (496)
|+....+||+|||||++||++|..|+++|+ +|+|+|+.+.++...+ +.. ......+++++
T Consensus 21 M~~~~~~dVlIVGaGpaGl~~A~~La~~G~-~V~vlEr~~~~~~~~~------------~~~-------l~~~~~~~l~~ 80 (549)
T 2r0c_A 21 MNAPIETDVLILGGGPVGMALALDLAHRQV-GHLVVEQTDGTITHPR------------VGT-------IGPRSMELFRR 80 (549)
T ss_dssp -CCCEEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSCSCCSSCC------------CCE-------ECHHHHHHHHH
T ss_pred cCCCCCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCCCCCCCc------------eee-------eCHHHHHHHHH
Confidence 443445799999999999999999999999 6999999886643111 111 22356788888
Q ss_pred cCCcccc
Q 010995 81 SGLRTCF 87 (496)
Q Consensus 81 lgl~~~~ 87 (496)
+|+....
T Consensus 81 lGl~~~~ 87 (549)
T 2r0c_A 81 WGVAKQI 87 (549)
T ss_dssp TTCHHHH
T ss_pred cCChHHH
Confidence 8886544
No 79
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.08 E-value=1.2e-09 Score=113.41 Aligned_cols=40 Identities=23% Similarity=0.557 Sum_probs=36.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGR 45 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr 45 (496)
..+||+|||||++||+||+.|+++|. +|+|||+.+.+||.
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~-~V~vlEk~~~~gg~ 159 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGA-NVILVDKAPFSGGN 159 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTC-CEEEECSSSSSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCCCCCCc
Confidence 45799999999999999999999999 69999999988873
No 80
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.06 E-value=1.6e-10 Score=116.49 Aligned_cols=57 Identities=7% Similarity=0.042 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCceeEEEEE---------------cCCce-EEEeCCCcEE--EcCEEEEecCh
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQH---------------SRNGV-TVKTEDGCVY--EANYVILSASI 252 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~---------------~~~~v-~V~~~~G~~~--~ad~VI~A~p~ 252 (496)
...+.+.|.+.+.+ .|++|+++++|++|.. +++++ .|.+.+| ++ .||.||+|+..
T Consensus 180 ~~~l~~~L~~~~~~------~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~ 252 (448)
T 3axb_A 180 AEKVVDYYYRRASG------AGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGV 252 (448)
T ss_dssp HHHHHHHHHHHHHH------TTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHHh------CCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCc
Confidence 45678888887776 6999999999999998 56665 5888887 78 99999999987
Q ss_pred HH
Q 010995 253 GV 254 (496)
Q Consensus 253 ~~ 254 (496)
..
T Consensus 253 ~s 254 (448)
T 3axb_A 253 WS 254 (448)
T ss_dssp GH
T ss_pred CH
Confidence 53
No 81
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.05 E-value=3.1e-10 Score=106.93 Aligned_cols=39 Identities=33% Similarity=0.646 Sum_probs=35.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCcEEEEeeCCCCCe
Q 010995 5 SRSPVIIIGAGVSGISAGKILAEN-GIEDILILEASDRIGG 44 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~-G~~~V~vlEa~~~~GG 44 (496)
.++||+|||||++||+||+.|+++ |. +|+|+|+++.+||
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~-~V~viEk~~~~gg 77 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNV-QVAIIEQSVSPGG 77 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTS-CEEEEESSSSCCT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCC-eEEEEECCCCCCC
Confidence 357999999999999999999997 99 6999999998876
No 82
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.05 E-value=5e-10 Score=112.82 Aligned_cols=45 Identities=29% Similarity=0.404 Sum_probs=38.9
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCC--CcEEEEeeCCCCCeEE
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENGI--EDILILEASDRIGGRV 46 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G~--~~V~vlEa~~~~GGr~ 46 (496)
|.....+||+|||||++||+||+.|++.|. + |+|+|+++.+||..
T Consensus 1 M~~~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~-V~v~E~~~~~GG~~ 47 (447)
T 2gv8_A 1 MCLPTIRKIAIIGAGPSGLVTAKALLAEKAFDQ-VTLFERRGSPGGVW 47 (447)
T ss_dssp --CCSCCEEEEECCSHHHHHHHHHHHTTTCCSE-EEEECSSSSSSTTC
T ss_pred CCCCCCCEEEEECccHHHHHHHHHHHhcCCCCC-eEEEecCCCCCCee
Confidence 555567899999999999999999999998 6 99999999999843
No 83
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.04 E-value=3.9e-10 Score=111.67 Aligned_cols=58 Identities=10% Similarity=0.072 Sum_probs=44.6
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEEcC-CceEEEe-CCCc--EEEcCEEEEecChHHHh
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSR-NGVTVKT-EDGC--VYEANYVILSASIGVLQ 256 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~-~~v~V~~-~~G~--~~~ad~VI~A~p~~~l~ 256 (496)
.+.+.|.+.+.+ .|++|+++++|++|+.++ +++.|++ .+|+ +++||.||.|.......
T Consensus 104 ~l~~~L~~~~~~------~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 104 EVTRDLMEAREA------CGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGIS 165 (394)
T ss_dssp HHHHHHHHHHHH------TTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCST
T ss_pred HHHHHHHHHHHh------cCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcHH
Confidence 455556665554 589999999999999864 5677776 6886 69999999999876543
No 84
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.04 E-value=4.3e-10 Score=108.71 Aligned_cols=43 Identities=26% Similarity=0.415 Sum_probs=38.2
Q ss_pred cccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
.+.+++++++|++|+.+++.+.|.+.+|.++.+|+||+|+...
T Consensus 78 ~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 78 FNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp GCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred cCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 5778999999999998877888988888889999999999874
No 85
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.03 E-value=2.9e-10 Score=110.70 Aligned_cols=43 Identities=14% Similarity=0.031 Sum_probs=39.0
Q ss_pred cccceeeCceeEEEEEcCCceE-EEeCCCcEEEcCEEEEecChHH
Q 010995 211 LDNRLKLNKVVRELQHSRNGVT-VKTEDGCVYEANYVILSASIGV 254 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~A~p~~~ 254 (496)
.|++++++++|++|+.+++++. |++.+| ++.||+||+|+....
T Consensus 89 ~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 89 YALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp TTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred cCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 6889999999999999999999 999887 899999999998644
No 86
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.02 E-value=1.4e-10 Score=119.19 Aligned_cols=41 Identities=32% Similarity=0.631 Sum_probs=37.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
..+||+|||||++||+||+.|++.|+ +|+|+|+++.+||..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~-~v~iiE~~~~~GGtw 48 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGM-KVLGIEAGEDVGGTW 48 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCTHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCC-CEEEEeCCCCCCCcc
Confidence 45799999999999999999999999 699999999999853
No 87
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.02 E-value=3.1e-09 Score=108.13 Aligned_cols=55 Identities=16% Similarity=0.176 Sum_probs=45.3
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
.+.+.+.+.+.+ .|++|+++++|++|+.+++++.|.+.+|+++.||.||+|++..
T Consensus 233 ~~~~~l~~~l~~------~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 233 DLRQLLNDAMVA------KGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHHHHH------HTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHH------CCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCC
Confidence 344555555544 6999999999999999888889999999899999999999753
No 88
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.02 E-value=1.9e-10 Score=110.92 Aligned_cols=40 Identities=23% Similarity=0.355 Sum_probs=36.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGR 45 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr 45 (496)
.++||+|||||++||+||+.|+++|+ +|+|+|+++.+||.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~~~~gG~ 45 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQA-SVKIIESLPQLGGQ 45 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCC-CEEEEEcCCCCCce
Confidence 45799999999999999999999999 69999999988874
No 89
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.00 E-value=1.3e-09 Score=104.55 Aligned_cols=42 Identities=21% Similarity=0.361 Sum_probs=36.1
Q ss_pred cccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
.|+++++ ++|++|..+++.+.|.+.+|.++.+|+||+|+...
T Consensus 83 ~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 83 YEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp TTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred cCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 5788999 99999999988899999888899999999999765
No 90
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.00 E-value=1.3e-09 Score=110.89 Aligned_cols=39 Identities=23% Similarity=0.439 Sum_probs=36.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCe
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGG 44 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GG 44 (496)
..+||+|||||++||++|..|+++|+ +|+|+|+++.+|+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~-~V~liEk~~~~g~ 129 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGA-RVVLVEKRIKFSR 129 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCSSCCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCC-eEEEEEeccccCC
Confidence 46899999999999999999999999 7999999988764
No 91
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.99 E-value=1.3e-09 Score=109.87 Aligned_cols=58 Identities=5% Similarity=-0.181 Sum_probs=43.8
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceE-EEeC---CCc--EEEcCEEEEecChHHHh
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVT-VKTE---DGC--VYEANYVILSASIGVLQ 256 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~-V~~~---~G~--~~~ad~VI~A~p~~~l~ 256 (496)
.+.+.|.+.+.+ .|++|+++++|++|..+++++. |++. +|+ +++||.||.|.+.....
T Consensus 101 ~l~~~L~~~a~~------~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 101 LYNQRVLKEAQD------RGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp HHHHHHHHHHHH------TTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred HHHHHHHHHHHH------cCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 455555555554 6899999999999999888765 5443 665 78999999999876543
No 92
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.98 E-value=9.8e-10 Score=107.35 Aligned_cols=43 Identities=23% Similarity=0.449 Sum_probs=37.7
Q ss_pred cccceeeCceeEEEEEcCC-ceEEEeCCCcEEEcCEEEEecChH
Q 010995 211 LDNRLKLNKVVRELQHSRN-GVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
.|++++++++|++|..+++ .+.|++.+|+++.+|+||+|+...
T Consensus 87 ~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 87 YNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp TCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred hCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 5788999999999998765 688999888889999999999864
No 93
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.96 E-value=4.9e-09 Score=107.00 Aligned_cols=58 Identities=12% Similarity=0.078 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEe---CCCc--EEEcCEEEEecChHH
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKT---EDGC--VYEANYVILSASIGV 254 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~---~~G~--~~~ad~VI~A~p~~~ 254 (496)
-..++..|.+.+.+ .|++|+++++|++|..+++.+.|++ .+|+ +++||.||+|+.+..
T Consensus 148 ~~~l~~~l~~~a~~------~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVR------KGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHH------TTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHH------cCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 45678888887776 6999999999999998876566766 3565 789999999998764
No 94
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.96 E-value=2.8e-08 Score=104.65 Aligned_cols=62 Identities=24% Similarity=0.355 Sum_probs=46.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHH-----CCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHh
Q 010995 6 RSPVIIIGAGVSGISAGKILAE-----NGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASK 80 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~-----~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~ 80 (496)
.+||+|||||++||++|..|++ .|+ +|+|+|+++.+.. .+ -+..+ .....+++++
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi-~v~viE~~~~~~~-------~g-----ra~~l-------~~~tle~l~~ 67 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRSTKVY-------NG-----QADGL-------QCRTLESLKN 67 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSSSCCC-------SC-----SCCEE-------CHHHHHHHHT
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCC-CEEEEeCCCCCCC-------CC-----ceeEE-------ChHHHHHHHH
Confidence 5799999999999999999999 999 6999999764320 00 01122 3457889999
Q ss_pred cCCcccc
Q 010995 81 SGLRTCF 87 (496)
Q Consensus 81 lgl~~~~ 87 (496)
+|+....
T Consensus 68 lGl~~~l 74 (665)
T 1pn0_A 68 LGLADKI 74 (665)
T ss_dssp TTCHHHH
T ss_pred CCCHHHH
Confidence 9987554
No 95
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.92 E-value=2.1e-08 Score=103.90 Aligned_cols=39 Identities=31% Similarity=0.581 Sum_probs=36.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeE
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGR 45 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr 45 (496)
.+||+|||||++||+||+.|+++|. +|+|+|+.+.+||.
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~-~v~~~e~~~~~~~~ 164 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGA-KVILLEKEPIPGGN 164 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSC-CEEEECSSSSSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCcc
Confidence 5799999999999999999999999 69999999999874
No 96
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.92 E-value=1.4e-08 Score=104.76 Aligned_cols=57 Identities=14% Similarity=0.119 Sum_probs=44.2
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCc--eEEEeCCCcEEEcCEEEEecChHHH
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNG--VTVKTEDGCVYEANYVILSASIGVL 255 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~A~p~~~l 255 (496)
..+.+.|.+.+.+ .|++++.+ +|++|..++++ +.|++.+|++++||.||.|.+....
T Consensus 165 ~~l~~~L~~~a~~------~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 165 HLVADFLKRWAVE------RGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHHHHH------TTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHH------CCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 4555666665554 68999999 89999986554 4688888888999999999987654
No 97
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.89 E-value=3.6e-09 Score=100.77 Aligned_cols=38 Identities=37% Similarity=0.626 Sum_probs=35.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCCcEEEEeeCCCCCe
Q 010995 6 RSPVIIIGAGVSGISAGKILAEN--GIEDILILEASDRIGG 44 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~--G~~~V~vlEa~~~~GG 44 (496)
.+||+|||||++||+||+.|+++ |. +|+|+|+.+.+||
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~-~V~LiEk~~~~GG 118 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDL-RITIVEAGVAPGG 118 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTS-CEEEEESSSSCCT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCC-EEEEEeCCCccCC
Confidence 58999999999999999999997 99 6999999988876
No 98
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.88 E-value=3.2e-09 Score=102.49 Aligned_cols=41 Identities=17% Similarity=0.218 Sum_probs=35.9
Q ss_pred cccceeeCceeEEEEEcCCceEEEe---CCCcEEEcCEEEEecCh
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKT---EDGCVYEANYVILSASI 252 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~---~~G~~~~ad~VI~A~p~ 252 (496)
.|+++++++ |++|..+++.+.+.+ .++.++.+|+||+|+..
T Consensus 97 ~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 97 FGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp TTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCE
T ss_pred cCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCC
Confidence 588999999 999999888898887 36678999999999976
No 99
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.88 E-value=1.8e-08 Score=104.07 Aligned_cols=57 Identities=19% Similarity=0.183 Sum_probs=44.4
Q ss_pred HHHHHHHHHhhccCCCCCcc-ccceeeCceeEEEEEcCCc--eEEEeCCCcEEEcCEEEEecChHHH
Q 010995 192 AHLLYKMAEEFLSTSDGKIL-DNRLKLNKVVRELQHSRNG--VTVKTEDGCVYEANYVILSASIGVL 255 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~-g~~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~A~p~~~l 255 (496)
..+.+.|.+.+.+ . |++++++ +|++|..++++ +.|++.+|++++||.||.|++....
T Consensus 194 ~~l~~~L~~~~~~------~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 194 HLVADFLRRFATE------KLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHH------HSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHh------cCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 3455666666554 5 9999999 99999986554 5688888888999999999987654
No 100
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.87 E-value=2.9e-09 Score=111.85 Aligned_cols=63 Identities=24% Similarity=0.285 Sum_probs=46.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHH-CCCCcEEEEeeCCCCCeEEEeeeeCCcEEeecceEEecCCCCCCChHHHHHHhcCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAE-NGIEDILILEASDRIGGRVRNEKFGGVSVELGAGWIAGVGGKESNPVWELASKSGL 83 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~-~G~~~V~vlEa~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~l~~~lgl 83 (496)
..+||+|||||++||++|..|++ +|+ +|+|+|+.+.++.. + -+..+ .....++++++|+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~-~V~viEr~~~~~~~-------g-----~a~~l-------~~~t~e~l~~lGl 90 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDI-RTCIVEQKEGPMEL-------G-----QADGI-------ACRTMEMFEAFEF 90 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTS-CEEEECSSSSCCSS-------C-----SCCEE-------CHHHHHHHHHTTC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCC-CEEEEeCCCCCCCC-------C-----ceeee-------CHHHHHHHHHcCc
Confidence 35799999999999999999999 999 69999998755320 0 01122 3356788888888
Q ss_pred cccc
Q 010995 84 RTCF 87 (496)
Q Consensus 84 ~~~~ 87 (496)
....
T Consensus 91 ~~~~ 94 (639)
T 2dkh_A 91 ADSI 94 (639)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 101
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.86 E-value=2.4e-08 Score=102.30 Aligned_cols=57 Identities=12% Similarity=0.123 Sum_probs=44.5
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCc--eEEEeCCCcEEEcCEEEEecChHHH
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNG--VTVKTEDGCVYEANYVILSASIGVL 255 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~A~p~~~l 255 (496)
..+.+.|.+.+.+ .|++++++ +|++|..++++ +.|++.+|++++||.||.|.+....
T Consensus 173 ~~l~~~L~~~a~~------~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 173 DEVARYLSEYAIA------RGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHH------TTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHH------CCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 3455566665554 68999999 99999986554 5688888888999999999988643
No 102
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.86 E-value=5.6e-09 Score=104.01 Aligned_cols=55 Identities=22% Similarity=0.237 Sum_probs=44.1
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCce-EEEeCCCcEEEcCEEEEecCh
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGV-TVKTEDGCVYEANYVILSASI 252 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~A~p~ 252 (496)
..+.+.+.+.+++ .|++|+++++|++|..+++++ .|.+.+|+++.||.||+|++.
T Consensus 194 ~~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 194 EALSEFYQAEHRA------HGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp HHHHHHHHHHHHH------TTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCC
T ss_pred HHHHHHHHHHHHh------CCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 3444445555544 799999999999999887777 488889999999999999874
No 103
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.86 E-value=2.7e-08 Score=104.13 Aligned_cols=57 Identities=19% Similarity=0.169 Sum_probs=43.9
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceE-EE---eCCCc--EEEcCEEEEecChHH
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVT-VK---TEDGC--VYEANYVILSASIGV 254 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~-V~---~~~G~--~~~ad~VI~A~p~~~ 254 (496)
..++..|.+.+.+ .|++|+++++|++|..+++++. |. +.+|+ .+.||.||+|+....
T Consensus 158 ~~l~~~L~~~a~~------~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLK------LGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHH------HTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHh------CCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 4688888887766 6999999999999988776543 32 25665 489999999997643
No 104
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.85 E-value=1.2e-08 Score=104.62 Aligned_cols=56 Identities=16% Similarity=0.133 Sum_probs=43.4
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceE-EEeCCCcEEEcCEEEEecChH
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVT-VKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~A~p~~ 253 (496)
..+.+.|.+.+.+. .|++| ++++|++|..+++++. |.+.+|.++.||.||+|+...
T Consensus 123 ~~~~~~L~~~Le~~-----~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 123 KRYREYMKKVCENQ-----ENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHHHHHHHTC-----TTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred HHHHHHHHHHHHhC-----CCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 34555565555542 47888 6889999998888875 888889899999999999864
No 105
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.85 E-value=2.1e-08 Score=101.40 Aligned_cols=54 Identities=11% Similarity=0.155 Sum_probs=43.0
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCc-eEEE-eCCCcEEEcCEEEEecChH
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNG-VTVK-TEDGCVYEANYVILSASIG 253 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~-v~V~-~~~G~~~~ad~VI~A~p~~ 253 (496)
.+.+.+.+.+.+ .|++|+++++|++|+.++++ +.|. +.+|+ +.+|.||+|++..
T Consensus 212 ~~~~~l~~~l~~------~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 212 DMRRGLHAAMEE------KGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRM 267 (463)
T ss_dssp HHHHHHHHHHHH------TTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEE
T ss_pred HHHHHHHHHHHH------CCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcc
Confidence 445555555555 69999999999999987665 6788 88886 9999999999753
No 106
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.83 E-value=1.9e-08 Score=95.67 Aligned_cols=40 Identities=20% Similarity=0.347 Sum_probs=33.5
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCe
Q 010995 3 STSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGG 44 (496)
Q Consensus 3 ~~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GG 44 (496)
.++.+||+|||||+|||+||.+|+++|+ +|+|+|+.. +||
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~-~v~lie~~~-~gg 42 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARK-QIALFDNNT-NRN 42 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTC-CEEEEECSC-CGG
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC-CCC
Confidence 3467899999999999999999999999 699999863 454
No 107
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.83 E-value=8e-09 Score=102.56 Aligned_cols=57 Identities=19% Similarity=0.141 Sum_probs=41.9
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCceeE---------EEEEcCCceEEEeCCCcEEEcCEEEEecChHH
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNKVVR---------ELQHSRNGVTVKTEDGCVYEANYVILSASIGV 254 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~---------~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~~ 254 (496)
...+.+.|.+.+.+ .|++|+++++|+ +|..+++++.|.+.+| ++.||.||+|+....
T Consensus 171 ~~~l~~~L~~~~~~------~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 171 PGSLALLAAQQAIG------QGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHHT------TTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHH------CCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccH
Confidence 45678888887776 699999999999 8888777787877776 899999999998753
No 108
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.83 E-value=2.3e-08 Score=103.66 Aligned_cols=39 Identities=21% Similarity=0.310 Sum_probs=35.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCe
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGG 44 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GG 44 (496)
..+||+|||||++||+||+.|+++|. +|+|||+.+..||
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~-~V~vlEK~~~~~g 44 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQ-TCALLSKVFPTRS 44 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCGGGS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCCCCC
Confidence 35799999999999999999999999 6999999887755
No 109
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.83 E-value=1.7e-08 Score=91.92 Aligned_cols=41 Identities=22% Similarity=0.109 Sum_probs=34.9
Q ss_pred ccceeeCceeEEEEEcCCce-EEEeCCCcEEEcCEEEEecChH
Q 010995 212 DNRLKLNKVVRELQHSRNGV-TVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 212 g~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
|++++ +++|++|..+++++ .|.+.+|++++||.||+|+...
T Consensus 83 gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 83 PLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp TEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred CcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 78888 67999999888776 4888888889999999999773
No 110
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.82 E-value=3.9e-08 Score=100.18 Aligned_cols=41 Identities=24% Similarity=0.447 Sum_probs=37.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
.++||+|||||++||+||+.|++.|+ +|+|+|+++.+||.+
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~-~V~liEk~~~~GG~~ 64 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGM-KVAVVEKRSTYGGTC 64 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESSSSSSHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCcc
Confidence 45899999999999999999999999 699999999999964
No 111
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.82 E-value=1.1e-08 Score=96.82 Aligned_cols=38 Identities=47% Similarity=0.722 Sum_probs=35.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCCcEEEEeeCCCCCe
Q 010995 6 RSPVIIIGAGVSGISAGKILAEN--GIEDILILEASDRIGG 44 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~--G~~~V~vlEa~~~~GG 44 (496)
.+||+|||||++||+||+.|+++ |. +|+|+|+.+.+||
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~-~V~v~e~~~~~gg 104 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDL-KVCIIESSVAPGG 104 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTS-CEEEECSSSSCCT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCC-eEEEEecCccccc
Confidence 46999999999999999999998 99 6999999998876
No 112
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.81 E-value=4.9e-09 Score=107.97 Aligned_cols=56 Identities=14% Similarity=0.155 Sum_probs=42.6
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCce-EEEeCCCcEEEcCEEEEecChHH
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGV-TVKTEDGCVYEANYVILSASIGV 254 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~A~p~~~ 254 (496)
.+.+.|.+.+.+. .|++| ++++|+.|..++++| .|.+.+|.++.||.||+|+....
T Consensus 125 ~~~~~L~e~Le~~-----~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 125 LYRQAVRTALENQ-----PNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHTC-----TTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHhC-----CCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 4455555555432 47888 678999999888876 48888888899999999998753
No 113
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.80 E-value=2e-08 Score=98.20 Aligned_cols=42 Identities=19% Similarity=0.261 Sum_probs=37.4
Q ss_pred cccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
.|++++++++|++|..+++++.|.+.+| ++.||+||+|+...
T Consensus 101 ~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 101 YELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp TTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCST
T ss_pred cCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCC
Confidence 6889999999999999888888988877 68999999999864
No 114
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.80 E-value=6.8e-08 Score=97.97 Aligned_cols=55 Identities=15% Similarity=0.080 Sum_probs=42.6
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCC---cEEEcCEEEEecChH
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDG---CVYEANYVILSASIG 253 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G---~~~~ad~VI~A~p~~ 253 (496)
.+.+.+.+.+.+ .|++++++++|++|+.+++++.|.+.++ +++.+|.||+|++..
T Consensus 222 ~~~~~l~~~l~~------~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 222 QVAKEAQKILTK------QGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHHHHHH------TTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHh------CCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCc
Confidence 344555555544 6999999999999999888877776554 578999999999754
No 115
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.79 E-value=9.9e-08 Score=99.18 Aligned_cols=58 Identities=17% Similarity=0.139 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceE-EEe---CCCc--EEEcCEEEEecChHH
Q 010995 191 YAHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVT-VKT---EDGC--VYEANYVILSASIGV 254 (496)
Q Consensus 191 ~~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~-V~~---~~G~--~~~ad~VI~A~p~~~ 254 (496)
-..++..|.+.+.+ .|++|+++++|++|..+++++. |.. .+|+ .+.||.||+|+....
T Consensus 154 G~~l~~~L~~~~~~------~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 154 GHSLLHTLYGRSLR------YDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHHTT------SCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHHh------CCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 35788888888776 7999999999999998777654 333 4664 689999999997644
No 116
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.79 E-value=3.4e-08 Score=93.31 Aligned_cols=41 Identities=17% Similarity=0.133 Sum_probs=34.7
Q ss_pred ccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 212 DNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 212 g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
++++. +++|++|+.+++++.|++.+|+++.+|+||+|+...
T Consensus 71 ~v~~~-~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 71 TIHWV-EGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp TEEEE-ESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCE
T ss_pred CeEEE-EeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCC
Confidence 44554 569999999888899999999889999999999874
No 117
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.79 E-value=4.3e-08 Score=85.42 Aligned_cols=41 Identities=22% Similarity=0.330 Sum_probs=36.5
Q ss_pred cccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
.|++++++ +|++|+.+++++.|++.+| ++++|.||+|+...
T Consensus 69 ~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 69 YGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp TTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTC
T ss_pred cCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCC
Confidence 68999999 9999999888888998888 89999999999753
No 118
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.78 E-value=4.3e-08 Score=99.24 Aligned_cols=41 Identities=27% Similarity=0.411 Sum_probs=37.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEE
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVR 47 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~ 47 (496)
++||+|||||++|++||+.|++.|+ +|+|+|+++.+||.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGM-KTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCCcCCcCC
Confidence 5799999999999999999999999 6999999999998643
No 119
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.77 E-value=6.9e-09 Score=104.97 Aligned_cols=37 Identities=24% Similarity=0.372 Sum_probs=34.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCC-----CCcEEEEeeCCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENG-----IEDILILEASDRIG 43 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G-----~~~V~vlEa~~~~G 43 (496)
.+||+|||||++||+||..|++.| . +|+|+|+++.+|
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~-~v~liE~~~~~g 71 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGAL-EVLFLDKQGDYR 71 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCC-CEEEEESCSSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcc-cEEEEecCCCCC
Confidence 459999999999999999999999 8 699999999887
No 120
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.77 E-value=2.1e-08 Score=96.33 Aligned_cols=38 Identities=34% Similarity=0.550 Sum_probs=34.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeE
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGR 45 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr 45 (496)
++||+|||||++||+||+.|+++|+ +|+|+|++ .+||.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~-~v~lie~~-~~gg~ 45 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQL-STLILEKG-MPGGQ 45 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESS-CTTGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCC-cEEEEeCC-CCCcc
Confidence 5799999999999999999999999 69999998 67773
No 121
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.77 E-value=2.2e-08 Score=95.54 Aligned_cols=41 Identities=20% Similarity=0.350 Sum_probs=35.9
Q ss_pred cccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecCh
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASI 252 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~ 252 (496)
.|+++++ ++|++|+.+++++.|.+.+|+++.+|+||+|+..
T Consensus 72 ~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 72 FGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp TSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCE
T ss_pred cCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCC
Confidence 5788888 7899999888888888888889999999999985
No 122
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.76 E-value=1.9e-08 Score=96.88 Aligned_cols=41 Identities=20% Similarity=0.167 Sum_probs=35.7
Q ss_pred cccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
.|+++++++ |++|+.+++.++|++ +|.++++|+||+|+...
T Consensus 83 ~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 83 FGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp TTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEE
T ss_pred CCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCC
Confidence 588999987 999998888888888 77789999999999864
No 123
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.75 E-value=1.5e-08 Score=102.28 Aligned_cols=40 Identities=25% Similarity=0.529 Sum_probs=36.9
Q ss_pred CCEEEECCCHHHHHHHHHHHH---CCCCc---EEEEeeCCCCCeEEE
Q 010995 7 SPVIIIGAGVSGISAGKILAE---NGIED---ILILEASDRIGGRVR 47 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~---~G~~~---V~vlEa~~~~GGr~~ 47 (496)
+||+|||||++||+||..|++ .|. + |+|+|+++.+||.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~-~~~~V~v~E~~~~~GG~w~ 48 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGA-EIPELVCFEKQADWGGQWN 48 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTC-CCCEEEEECSSSSSCGGGS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCC-CCCcEEEEEcCCCCCCEee
Confidence 699999999999999999999 999 8 999999999998443
No 124
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.75 E-value=1.4e-07 Score=96.80 Aligned_cols=57 Identities=12% Similarity=0.103 Sum_probs=41.6
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCc--eEEEeCCCcEEEcCEEEEecChHHH
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNG--VTVKTEDGCVYEANYVILSASIGVL 255 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~A~p~~~l 255 (496)
.+.+.|.+.+.+. .|++++++ +|++|..++++ +.|++.+|.+++||.||.|......
T Consensus 176 ~l~~~L~~~a~~~-----~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 176 KFSQLLTEHCTQK-----LGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHHHHT-----SCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHHHHhc-----CCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 3455555554431 48899999 59999987554 3577878778999999999988654
No 125
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.74 E-value=2.8e-08 Score=102.03 Aligned_cols=39 Identities=28% Similarity=0.492 Sum_probs=34.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGR 45 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr 45 (496)
..+||+|||||++||+||+.|++ |. +|+|+|+.+..||.
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~-~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QH-QVIVLSKGPVTEGS 45 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TS-CEEEECSSCTTC--
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CC-cEEEEECCCCCCCC
Confidence 45899999999999999999999 99 69999999887764
No 126
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.74 E-value=3.9e-08 Score=100.31 Aligned_cols=54 Identities=20% Similarity=0.219 Sum_probs=44.3
Q ss_pred HHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 194 LLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 194 l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
+.+.+.+.+++ .|++|+++++|++|+.+++++.|.+.+|+++.+|.||+|++..
T Consensus 225 ~~~~l~~~l~~------~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 225 AALVLEESFAE------RGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHHHHH------TTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHH------CCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCC
Confidence 44455555554 7999999999999998877788888888899999999999764
No 127
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.74 E-value=9.6e-08 Score=97.11 Aligned_cols=55 Identities=13% Similarity=0.139 Sum_probs=43.6
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCC-ceEEEeCCCcEEEcCEEEEecChH
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRN-GVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
.+.+.+.+.+.+ .|++|+++++|++|+.+++ .+.|++.+|+++.+|.||+|++..
T Consensus 232 ~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 232 ELRKQLTEQLRA------NGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp HHHHHHHHHHHH------TTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHh------CCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCC
Confidence 344555555554 6999999999999998764 477888888889999999999753
No 128
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.73 E-value=2.5e-08 Score=98.90 Aligned_cols=55 Identities=15% Similarity=0.224 Sum_probs=44.6
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceE-EEeCCCcEEEcCEEEEecCh
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVT-VKTEDGCVYEANYVILSASI 252 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~A~p~ 252 (496)
..+.+.+.+.+.+ .|++++++++|++|+.+++++. |.+.+|+++.||.||+|++.
T Consensus 184 ~~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 184 PEISSYFHDRHSG------AGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp HHHHHHHHHHHHH------TTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHh------CCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 3455555555554 7999999999999998877765 88899999999999999975
No 129
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.72 E-value=6.5e-08 Score=100.55 Aligned_cols=57 Identities=16% Similarity=0.133 Sum_probs=44.3
Q ss_pred HHHHHHHHHhhccCCCCCccc-cceeeCceeEEEEEcCCceE-E--E-eCCCc--EEEcCEEEEecChHH
Q 010995 192 AHLLYKMAEEFLSTSDGKILD-NRLKLNKVVRELQHSRNGVT-V--K-TEDGC--VYEANYVILSASIGV 254 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g-~~i~~~~~V~~I~~~~~~v~-V--~-~~~G~--~~~ad~VI~A~p~~~ 254 (496)
..+...|.+.+.+ .| ++|+++++|++|..+++++. | . +.+|+ .+.||.||+|+....
T Consensus 134 ~~l~~~L~~~~~~------~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQ------FPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTT------CTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHh------CCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 5678888888766 56 89999999999998877543 3 2 25675 689999999998644
No 130
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.71 E-value=8.6e-08 Score=97.10 Aligned_cols=55 Identities=20% Similarity=0.207 Sum_probs=44.9
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecCh
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASI 252 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~ 252 (496)
..+.+.+.+.+.+ .|++|+++++|++|+.++++++|.+.+|+++.||.||+|++.
T Consensus 202 ~~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 202 KSLSQMLRHDLEK------NDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp HHHHHHHHHHHHH------TTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHh------cCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCC
Confidence 3445555555554 699999999999999888888888888889999999999875
No 131
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.70 E-value=1.7e-08 Score=103.92 Aligned_cols=55 Identities=15% Similarity=0.084 Sum_probs=41.5
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceE-EEeCCCcEEEcCEEEEecChH
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVT-VKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~A~p~~ 253 (496)
.+.+.|.+.+.+. .|++|. +.+|+.|..++++|. |.+.+|.++.||.||+|+...
T Consensus 118 ~l~~~L~~~l~~~-----~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 118 QYSLYMRRIVEHE-----PNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp HHHHHHHHHHHTC-----TTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhC-----CCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 3445555554431 378884 669999998888887 888888899999999999864
No 132
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.68 E-value=1.9e-07 Score=94.19 Aligned_cols=54 Identities=22% Similarity=0.262 Sum_probs=43.4
Q ss_pred HHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCc-EEEcCEEEEecChH
Q 010995 194 LLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGC-VYEANYVILSASIG 253 (496)
Q Consensus 194 l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~-~~~ad~VI~A~p~~ 253 (496)
+.+.+.+.+.+ .|++++++++|++|+.+++++.|++.+|+ ++.+|.||+|++..
T Consensus 209 ~~~~l~~~l~~------~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 209 LSATLAENMHA------QGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp HHHHHHHHHHH------TTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHH------CCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCC
Confidence 34444455544 69999999999999987777888888998 89999999998753
No 133
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.68 E-value=1.3e-07 Score=95.08 Aligned_cols=54 Identities=17% Similarity=0.253 Sum_probs=42.6
Q ss_pred HHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCc-eEEEeCCCcEEEcCEEEEecChH
Q 010995 194 LLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNG-VTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 194 l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
+.+.+.+.+.+ .|++++++++|++|+.++++ +.|++.+|+++.+|.||+|++..
T Consensus 210 ~~~~l~~~l~~------~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 210 ISETLVEVMNA------EGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp HHHHHHHHHHH------HSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHH------CCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCC
Confidence 44444555544 69999999999999987654 77888888889999999998653
No 134
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.67 E-value=5e-08 Score=96.05 Aligned_cols=54 Identities=19% Similarity=0.306 Sum_probs=44.9
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecCh
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASI 252 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~ 252 (496)
.+.+.+.+.+.+ .|++++++++|++|+.+++++.|.+.+|+++++|.||+|++.
T Consensus 188 ~~~~~l~~~l~~------~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 188 AAAKAVQAGLEG------LGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp HHHHHHHHHHHT------TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHH------cCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCC
Confidence 455555566555 699999999999999887888888888989999999999864
No 135
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.67 E-value=3.7e-08 Score=93.86 Aligned_cols=43 Identities=16% Similarity=0.194 Sum_probs=36.6
Q ss_pred cccceeeCceeEEEEEcC---CceEEEeCCCcEEEcCEEEEecChH
Q 010995 211 LDNRLKLNKVVRELQHSR---NGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~---~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
.|++++++++|+.|..+. +.+.|.+.+|+++.+|+||+|+...
T Consensus 69 ~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 69 YDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp SCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred cCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 688999999999998653 3678888888889999999999864
No 136
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.66 E-value=3.1e-08 Score=100.08 Aligned_cols=35 Identities=34% Similarity=0.639 Sum_probs=32.4
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCe
Q 010995 8 PVIIIGAGVSGISAGKILAENGIEDILILEASDRIGG 44 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GG 44 (496)
||+|||||++||+||+.|+++|. +|+|+|+. ..||
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~-~V~viek~-~~~g 35 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGK-KVTLISKR-IDGG 35 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTC-CEEEECSS-TTCS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-CEEEEeCC-CCCc
Confidence 79999999999999999999999 69999998 5555
No 137
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.65 E-value=1.1e-07 Score=95.68 Aligned_cols=55 Identities=9% Similarity=0.222 Sum_probs=44.5
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
..+.+.+.+.+.+ .|++|+++++|++|+..++++.|.+.+| ++.||.||+|++..
T Consensus 189 ~~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 189 KEMVAEVQKSLEK------QAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp HHHHHHHHHHHHT------TTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCB
T ss_pred HHHHHHHHHHHHH------cCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCC
Confidence 3455555555555 7999999999999998888888888777 89999999999754
No 138
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.64 E-value=7.3e-09 Score=99.63 Aligned_cols=42 Identities=40% Similarity=0.597 Sum_probs=37.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHH--CCCCcEEEEeeCCCCCeEEE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAE--NGIEDILILEASDRIGGRVR 47 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~--~G~~~V~vlEa~~~~GGr~~ 47 (496)
..+||+|||||+|||+||++|++ .|+ +|+|+|+++.+||.+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~-~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDL-KVCIIESSVAPGGGSW 107 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTS-CEEEECSSSSCCTTTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCC-eEEEEECCCCCCceEE
Confidence 45799999999999999999985 499 6999999999999654
No 139
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.63 E-value=1.2e-07 Score=91.39 Aligned_cols=52 Identities=8% Similarity=0.150 Sum_probs=36.9
Q ss_pred hCCCCcEEEccccccCcCCccchHHHHHHHHHHHHHHHHHhcccccccccCCc
Q 010995 402 RAPVAGIFFTGEHTSERFNGYVHGGYLAGIDTGKAVVEKIRKDNERNNSETQN 454 (496)
Q Consensus 402 ~~p~~~l~~aGd~~~~~~~g~~egA~~SG~~aA~~il~~l~~~~~~~~~~~~~ 454 (496)
++..++||.+||.... .+.....|+..|..||..|...+.+.+....++.|.
T Consensus 277 ~t~~~~iya~GD~~~~-~~~~~~~A~~~g~~aA~~i~~~l~~~~~~~~~~~~~ 328 (335)
T 2a87_A 277 STSLPGVFAAGDLVDR-TYRQAVTAAGSGCAAAIDAERWLAEHAATGEADSTD 328 (335)
T ss_dssp BCSSTTEEECGGGTCC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHCC------
T ss_pred ccCCCCEEEeeecCCc-cHHHHHHHHHhHHHHHHHHHHHhhcCcCccccCCch
Confidence 4567899999999875 234677899999999999999998766554334443
No 140
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.60 E-value=4.7e-07 Score=94.30 Aligned_cols=38 Identities=18% Similarity=0.358 Sum_probs=35.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCCcEEEEeeCCCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAEN--GIEDILILEASDRIG 43 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~--G~~~V~vlEa~~~~G 43 (496)
.++||+|||||++||+||+.|++. |. +|+|+|+++.+|
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~-~V~vie~~~~~~ 74 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEED-EIIMVERGEYIS 74 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSS-EEEEECSSSCSS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCC-CEEEEECCCCcc
Confidence 467999999999999999999998 88 799999999876
No 141
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.58 E-value=1e-07 Score=97.55 Aligned_cols=43 Identities=16% Similarity=0.202 Sum_probs=36.7
Q ss_pred cccceeeCceeEEEEEc---CCceEEEeCCCcEEEcCEEEEecChH
Q 010995 211 LDNRLKLNKVVRELQHS---RNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~---~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
.|++++++++|++|..+ ++.+.|++.+|.++.+|+||+|+...
T Consensus 280 ~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 280 YDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp SCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred cCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 68899999999999864 23678888888899999999999864
No 142
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.58 E-value=6.1e-07 Score=93.06 Aligned_cols=37 Identities=22% Similarity=0.358 Sum_probs=33.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCCcEEEEeeCCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAEN--GIEDILILEASDRIG 43 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~--G~~~V~vlEa~~~~G 43 (496)
++||+|||||++||+||+.|++. |. +|+|+|+++.+|
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~-~V~lie~~~~~~ 39 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETA-EIIMFERGEYVS 39 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSS-EEEEECSSSCSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCC-CEEEEECCCCcc
Confidence 36899999999999999999998 78 799999998876
No 143
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.57 E-value=1.2e-07 Score=90.64 Aligned_cols=38 Identities=24% Similarity=0.491 Sum_probs=33.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCe
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGG 44 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GG 44 (496)
.++||+|||||++||+||+.|+++|+ +|+|+|+. .+||
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~-~~gg 41 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGM-EKGG 41 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCS-STTG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC-cEEEEccC-CCCc
Confidence 45799999999999999999999999 69999964 6666
No 144
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.55 E-value=3.3e-07 Score=91.00 Aligned_cols=54 Identities=13% Similarity=0.103 Sum_probs=42.4
Q ss_pred HHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 194 LLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 194 l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
+.+.+.+.+.+ .|++|+++++|++|+.+++...|++.+|+++.||.||+|++..
T Consensus 187 ~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 187 IGAWLRGLLTE------LGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHHH------HTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHH------CCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCe
Confidence 34444444444 6999999999999988665456888899999999999999753
No 145
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.55 E-value=2.8e-08 Score=94.87 Aligned_cols=43 Identities=26% Similarity=0.465 Sum_probs=36.0
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
|++ ..+||+|||||+|||+||.+|++.|+ +|+|+|+ +.+||.+
T Consensus 2 Mte-~~yDvvIIG~GpAGl~aA~~l~~~g~-~V~liE~-~~~gG~~ 44 (312)
T 4gcm_A 2 MTE-IDFDIAIIGAGPAGMTAAVYASRANL-KTVMIER-GIPGGQM 44 (312)
T ss_dssp --C-CSEEEEEECCSHHHHHHHHHHHHTTC-CEEEEES-SCTTGGG
T ss_pred CCC-CCCCEEEECCCHHHHHHHHHHHHCCC-CEEEEec-CCCCCee
Confidence 554 46999999999999999999999999 6999998 4677744
No 146
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.52 E-value=1.6e-07 Score=92.23 Aligned_cols=40 Identities=8% Similarity=0.130 Sum_probs=34.8
Q ss_pred cccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecCh
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASI 252 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~ 252 (496)
.|++++++++|++|+.+++ +|++.+|+++.+|++|+|+..
T Consensus 75 ~~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 75 NNIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp TTCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCC
Confidence 5789999999999998766 566778889999999999985
No 147
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.52 E-value=8.8e-07 Score=88.45 Aligned_cols=54 Identities=17% Similarity=0.142 Sum_probs=42.4
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEE--cCCce-EEEeCCCcEEEcCEEEEecCh
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQH--SRNGV-TVKTEDGCVYEANYVILSASI 252 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~--~~~~v-~V~~~~G~~~~ad~VI~A~p~ 252 (496)
.+.+.+.+.+++ .|++++++++|++|+. +++++ .|.+.+|+++.+|.||+|++.
T Consensus 192 ~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 192 PVSAFYEHLHRE------AGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp HHHHHHHHHHHH------HTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHh------CCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 344445555544 6999999999999997 55666 588888989999999999975
No 148
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.50 E-value=1.9e-06 Score=90.29 Aligned_cols=36 Identities=28% Similarity=0.496 Sum_probs=32.7
Q ss_pred CCCEEEECCCHHHHHHHHHHH---H-CCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILA---E-NGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~---~-~G~~~V~vlEa~~~~ 42 (496)
.+||+|||||++||+||+.|+ + +|. +|+|+|+.+..
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~-~V~vlEK~~~~ 61 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGL-KVTLVEKAAVE 61 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTC-CEEEECSSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCC-eEEEEeCcCCC
Confidence 479999999999999999999 6 899 69999998753
No 149
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.43 E-value=2.8e-07 Score=94.19 Aligned_cols=55 Identities=11% Similarity=0.013 Sum_probs=46.2
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecCh
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASI 252 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~ 252 (496)
..+.+.+.+.+++ .|+++++++.|++++..++++.|.+.++.++.+|.|++|+..
T Consensus 263 ~ei~~~l~~~l~~------~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 263 QQCAVKVKLYMEE------QGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp HHHHHHHHHHHHH------TTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred hhHHHHHHHHHHh------hcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccc
Confidence 3455556666655 799999999999999999999999988889999999999864
No 150
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.39 E-value=2.3e-07 Score=90.47 Aligned_cols=38 Identities=34% Similarity=0.544 Sum_probs=34.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIG 43 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~G 43 (496)
.++||+|||||++|+++|++|+++|. +|+|+|+....+
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~-~V~vle~~~~~~ 42 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGY-SVHILARDLPED 42 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC-EEEEEeccCCCC
Confidence 57899999999999999999999999 799999987443
No 151
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.36 E-value=1.8e-07 Score=89.17 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=32.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+||+|||||+|||+||.+|+++|+ +|+|+|+..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~-~v~liE~~~ 37 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSL-KPVMYEGFM 37 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTC-CCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEecCC
Confidence 37999999999999999999999999 699999864
No 152
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.34 E-value=1.8e-06 Score=87.57 Aligned_cols=42 Identities=7% Similarity=0.156 Sum_probs=35.5
Q ss_pred cccceeeCceeEEEEEcCCceEEEe-CCCc--EEEcCEEEEecCh
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKT-EDGC--VYEANYVILSASI 252 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~-~~G~--~~~ad~VI~A~p~ 252 (496)
.|++++++++|+.|+.+++.+.+.. .+|+ ++.+|++|+|+..
T Consensus 106 ~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 106 YGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp TCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred cCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 4788999999999998888788776 4565 7999999999985
No 153
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.33 E-value=3.5e-07 Score=91.79 Aligned_cols=41 Identities=32% Similarity=0.570 Sum_probs=38.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
..+||+|||||++||+||+.|++.|+ +|+|+|+.+++||..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~-~V~v~e~~~~~GG~l 161 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGY-EVHVYDRYDRMGGLL 161 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTC-CEEEECSSSSCSTHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCCCCCee
Confidence 46899999999999999999999999 699999999999853
No 154
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.28 E-value=3.4e-07 Score=87.17 Aligned_cols=40 Identities=33% Similarity=0.554 Sum_probs=36.1
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEE-EeeCCCCCeE
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILI-LEASDRIGGR 45 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~v-lEa~~~~GGr 45 (496)
..++||+|||||++||+||+.|+++|+ +|+| +|+ +.+||.
T Consensus 2 ~~~~~vvIIG~G~aGl~aA~~l~~~g~-~v~li~e~-~~~gG~ 42 (315)
T 3r9u_A 2 NAMLDVAIIGGGPAGLSAGLYATRGGL-KNVVMFEK-GMPGGQ 42 (315)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHHTC-SCEEEECS-SSTTGG
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCC-CeEEEEeC-CCCCce
Confidence 357899999999999999999999999 6999 999 677774
No 155
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.26 E-value=3.6e-07 Score=92.33 Aligned_cols=41 Identities=27% Similarity=0.504 Sum_probs=37.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEE
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVR 47 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~ 47 (496)
.+||+|||||++||+||..|++.|. +|+|+|+++.+||.+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~-~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKY-NVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECTTSSSSHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCC-eEEEEECCCCCCCccc
Confidence 5899999999999999999999999 6999999999998543
No 156
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.24 E-value=4.2e-07 Score=88.18 Aligned_cols=37 Identities=30% Similarity=0.354 Sum_probs=32.9
Q ss_pred CCEEEECCCHHHHHHHHHHHHCC------CCcEEEEeeCCCCCe
Q 010995 7 SPVIIIGAGVSGISAGKILAENG------IEDILILEASDRIGG 44 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G------~~~V~vlEa~~~~GG 44 (496)
.||+|||||++||++|++|+++| . +|+|||+....+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~-~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPL-DIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSC-EEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCc-eEEEEECCCCCCC
Confidence 38999999999999999999998 8 7999999875444
No 157
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.23 E-value=9.5e-07 Score=90.51 Aligned_cols=43 Identities=26% Similarity=0.339 Sum_probs=38.9
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEE
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVR 47 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~ 47 (496)
+.++||+|||||++|++||+.|++.|. +|+|+|+++.+||.+.
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE~~~~~GG~~~ 83 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGG-RQLIVDRWPFLGGSCP 83 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTC-CEEEEESSSSSSCHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCCCCCCccc
Confidence 346899999999999999999999999 6999999988998654
No 158
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.21 E-value=6e-07 Score=91.39 Aligned_cols=38 Identities=16% Similarity=0.091 Sum_probs=30.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCe
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGG 44 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GG 44 (496)
.+||||||||++||++|..|.++|. ..+++|+.+..|+
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~-~~~~~~~~~~~~~ 76 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALD-PRLNKSASNIHAQ 76 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHC-TTTCTTC----CC
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCC-CceEEeccccCCC
Confidence 4799999999999999999999988 5778888776665
No 159
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.20 E-value=7.9e-07 Score=84.97 Aligned_cols=37 Identities=38% Similarity=0.629 Sum_probs=33.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCe
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGG 44 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GG 44 (496)
.+||+|||||++||+||+.|+++|+ +|+|+|+ ..+||
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~-~v~lie~-~~~gg 52 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGF-SVAILDK-AVAGG 52 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEEES-SSTTG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeC-CCCCc
Confidence 4799999999999999999999999 6999999 46676
No 160
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.19 E-value=1.1e-06 Score=90.06 Aligned_cols=35 Identities=31% Similarity=0.524 Sum_probs=32.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+||+|||||++||+||..|++.|. +|+|+|+.+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~-~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGK-KVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTC-CEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeccC
Confidence 45899999999999999999999999 699999964
No 161
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.19 E-value=9e-07 Score=93.81 Aligned_cols=42 Identities=40% Similarity=0.751 Sum_probs=38.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVR 47 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~ 47 (496)
..+||+|||||++||+||+.|+++|+ +|+|+|+++++||.+.
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~-~V~liE~~~~~GG~~~ 431 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGY-DVVLAEAGRDLGGRVT 431 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSSSSCTHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCEee
Confidence 46799999999999999999999999 7999999999998755
No 162
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.19 E-value=8.1e-07 Score=90.05 Aligned_cols=40 Identities=25% Similarity=0.549 Sum_probs=35.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
.++||+|||||++||+||+.|++.|+ +|+|+|++ .+||.+
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~-~V~liE~~-~~GG~~ 58 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGA-RAAVVESH-KLGGTC 58 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS-CTTHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC-eEEEEecC-CCCCcc
Confidence 45899999999999999999999999 69999965 788864
No 163
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.18 E-value=1.3e-06 Score=88.45 Aligned_cols=42 Identities=29% Similarity=0.470 Sum_probs=38.5
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
..++||+|||||++|++||..|++.|+ +|+|+|+++.+||.+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~-~V~liE~~~~~GG~~ 45 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGF-KTTCIEKRGALGGTC 45 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSSSCCSH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCCccccc
Confidence 457899999999999999999999999 699999998898854
No 164
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.17 E-value=8.5e-07 Score=89.81 Aligned_cols=42 Identities=26% Similarity=0.462 Sum_probs=38.5
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
+.++||+|||||++|++||..|++.|+ +|+|+|+++.+||.+
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~-~V~liE~~~~~GG~~ 45 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGF-KTVCIEKNETLGGTC 45 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTC-CEEEEECSSSSSHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCCCcCCcc
Confidence 456899999999999999999999999 699999999999964
No 165
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.15 E-value=1.1e-06 Score=87.81 Aligned_cols=35 Identities=23% Similarity=0.528 Sum_probs=31.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.++||+|||||++||++|+.|+++|+ +|+|+|+++
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDV-DVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTC-EEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCC-eEEEEcCCC
Confidence 34799999999999999999999999 799999976
No 166
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.14 E-value=1.6e-06 Score=85.18 Aligned_cols=35 Identities=29% Similarity=0.404 Sum_probs=32.7
Q ss_pred CCEEEECCCHHHHHHHHHHHHC--CCCcEEEEeeCCCC
Q 010995 7 SPVIIIGAGVSGISAGKILAEN--GIEDILILEASDRI 42 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~--G~~~V~vlEa~~~~ 42 (496)
.||+|||||++||++|..|+++ |+ +|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~-~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLW-AIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTS-EEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCC-CEEEEECCCCC
Confidence 3799999999999999999999 99 79999998776
No 167
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.14 E-value=1.6e-06 Score=87.54 Aligned_cols=41 Identities=27% Similarity=0.476 Sum_probs=37.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVR 47 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~ 47 (496)
.++||+|||||++|++||+.|++.|+ +|+|+|++ .+||.+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lie~~-~~GG~~~ 43 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGA-QVTLIERG-TIGGTCV 43 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS-STTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC-CCCcccc
Confidence 47899999999999999999999999 79999998 7888643
No 168
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.12 E-value=1.4e-06 Score=87.60 Aligned_cols=56 Identities=18% Similarity=0.190 Sum_probs=43.9
Q ss_pred HHHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 192 AHLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 192 ~~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
..+.+.+.+.+.+ .|++++++++|++|+.+++++.|++.+|+++.+|.||+|++..
T Consensus 208 ~~~~~~l~~~l~~------~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 208 LEVSRAAERVFKK------QGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp HHHHHHHHHHHHH------HTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHH------CCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCC
Confidence 3445555555554 6899999999999998877788888788889999999998754
No 169
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.12 E-value=1.1e-06 Score=88.52 Aligned_cols=44 Identities=32% Similarity=0.547 Sum_probs=36.7
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
|...+++||+|||||++|++||..|++.|. +|+|+|+++ +||.+
T Consensus 1 m~~m~~~dvvIIG~G~aG~~aA~~l~~~g~-~V~lie~~~-~GG~~ 44 (464)
T 2eq6_A 1 MTPMKTYDLIVIGTGPGGYHAAIRAAQLGL-KVLAVEAGE-VGGVC 44 (464)
T ss_dssp ---CEEEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSC-TTHHH
T ss_pred CCCcccCCEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCC-CCCCC
Confidence 443335899999999999999999999999 699999987 88854
No 170
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.11 E-value=1.6e-06 Score=88.16 Aligned_cols=42 Identities=21% Similarity=0.416 Sum_probs=36.9
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEee--------CCCCCeEE
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEA--------SDRIGGRV 46 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa--------~~~~GGr~ 46 (496)
..++||+|||||++||+||..|++.|. +|+|+|+ ...+||.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~-~V~liEk~~~~~~~~~~~~GGtc 53 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGK-KVAVADYVEPSPRGTKWGLGGTC 53 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECCCCCCTTSCCCCTTCHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCC-eEEEEEecccccccccCCcCCee
Confidence 456899999999999999999999999 6999998 55677744
No 171
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.09 E-value=1.8e-06 Score=87.50 Aligned_cols=41 Identities=29% Similarity=0.491 Sum_probs=37.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
.++||+|||||++|++||..|++.|+ +|+|+|+++.+||.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE~~~~~GG~~ 44 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGF-NTACVEKRGKLGGTC 44 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSSSSSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCcCCcc
Confidence 35899999999999999999999999 699999999998854
No 172
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.08 E-value=2.3e-06 Score=91.15 Aligned_cols=42 Identities=33% Similarity=0.743 Sum_probs=38.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVR 47 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~ 47 (496)
..+||+|||||++||+||+.|++.|+ +|+|+|+++.+||.+.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~-~Vtlie~~~~~GG~~~ 429 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEKIGGHLN 429 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSTTTTHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCCcCCeee
Confidence 45799999999999999999999999 7999999999998654
No 173
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.07 E-value=1.5e-06 Score=88.13 Aligned_cols=40 Identities=30% Similarity=0.561 Sum_probs=37.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
++||+|||||++|++||..|++.|. +|+|+|+++.+||.+
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~-~V~liE~~~~~GG~~ 45 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGL-KVAIVERYKTLGGVC 45 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSSCSSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCCCCCCce
Confidence 5799999999999999999999999 699999999999854
No 174
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.07 E-value=1.9e-06 Score=87.33 Aligned_cols=41 Identities=27% Similarity=0.540 Sum_probs=36.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVR 47 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~ 47 (496)
.++||+|||||++|++||+.|++.|. +|+|+|++ .+||.+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~-~V~liE~~-~~GG~~~ 50 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGA-KTLLVEAK-ALGGTCV 50 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSC-CEEEEESS-CTTHHHH
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCC-cEEEEeCC-CcCCcCc
Confidence 35899999999999999999999999 69999997 6888653
No 175
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.06 E-value=2.5e-06 Score=86.50 Aligned_cols=33 Identities=27% Similarity=0.451 Sum_probs=31.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEee
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEA 38 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa 38 (496)
..+||+|||||++|++||+.|++.|. +|+|+|+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~-~V~liEk 40 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGA-RVACLDF 40 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTC-CEEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC-EEEEEEe
Confidence 56899999999999999999999999 6999995
No 176
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.06 E-value=3.8e-06 Score=80.52 Aligned_cols=38 Identities=24% Similarity=0.346 Sum_probs=34.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCe
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGG 44 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GG 44 (496)
++||+|||||++|+.||+.|+++|. +|+|+|++...+.
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~-~V~liE~~~~~~t 38 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGV-PVRLFEMRPKRMT 38 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECCTTTSCC
T ss_pred CCCEEEECchHHHHHHHHHHHHCCC-cEEEEeccCCcCC
Confidence 4799999999999999999999999 6999999876543
No 177
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.05 E-value=2.4e-05 Score=78.66 Aligned_cols=36 Identities=33% Similarity=0.674 Sum_probs=32.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..+|+|||||.+|+.+|..|++.|. +|+|+|+++++
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~-~V~lv~~~~~~ 202 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGA-EVIVLEYMDRI 202 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-EEEEEecCCcc
Confidence 4689999999999999999999999 79999997754
No 178
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.02 E-value=2.9e-06 Score=88.40 Aligned_cols=38 Identities=21% Similarity=0.451 Sum_probs=36.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCe
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGG 44 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GG 44 (496)
.+||+|||||++||+||+.|+++|+ +|+|+|+.+..||
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~-~V~liE~~~~~gg 83 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGY-KVAMFDIGEIDSG 83 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCC-cEEEEeccCCCCC
Confidence 5799999999999999999999999 7999999999988
No 179
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.01 E-value=3e-06 Score=85.27 Aligned_cols=41 Identities=27% Similarity=0.498 Sum_probs=37.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVR 47 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~ 47 (496)
.++||+|||||.+|++||..|++.|. +|+|+|+ +.+||.+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGI-PTVLVEG-QALGGTCL 44 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTC-CEEEECS-SCTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC-EEEEEcc-CCCCCcCC
Confidence 46899999999999999999999999 6999999 78998764
No 180
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.01 E-value=3e-06 Score=86.08 Aligned_cols=39 Identities=23% Similarity=0.423 Sum_probs=35.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
++||+|||||++||+||..|++.|. +|+|+|++ .+||.|
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~-~V~liE~~-~~GGtc 46 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTD-KVVLIEGG-AYGTTC 46 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCS-CEEEEESS-CSSCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-cEEEEeCC-CCCCcc
Confidence 4799999999999999999999999 69999996 488865
No 181
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.99 E-value=3.7e-06 Score=84.58 Aligned_cols=39 Identities=28% Similarity=0.501 Sum_probs=35.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
++||+|||||++|++||..|++.|. +|+|+|++ .+||.+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lie~~-~~gG~~ 41 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG-NLGGVC 41 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-eEEEEECC-CCCCcC
Confidence 5899999999999999999999999 69999998 788754
No 182
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.99 E-value=2.3e-06 Score=86.95 Aligned_cols=54 Identities=9% Similarity=0.148 Sum_probs=42.1
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCC-ceEEEeCCCcEEEcCEEEEecCh
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRN-GVTVKTEDGCVYEANYVILSASI 252 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VI~A~p~ 252 (496)
.+.+.+.+.+.+ .|++|+++++|++|+.+++ .+.|++.+|+++.+|.||+|++.
T Consensus 236 ~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 236 TIREEVTKQLTA------NGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp HHHHHHHHHHHH------TTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHh------CCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCC
Confidence 344455555554 6999999999999988754 46788888888999999999864
No 183
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.99 E-value=4.4e-06 Score=85.03 Aligned_cols=55 Identities=11% Similarity=0.164 Sum_probs=43.2
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCc-eEEEeCCCcE-EEcCEEEEecChH
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNG-VTVKTEDGCV-YEANYVILSASIG 253 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~-v~V~~~~G~~-~~ad~VI~A~p~~ 253 (496)
.+.+.+.+.+.+ .|++++++++|++|+.++++ +.|.+.+|++ +.+|.||+|++..
T Consensus 218 ~~~~~l~~~l~~------~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 218 SVINVLENDMKK------NNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp HHHHHHHHHHHH------TTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBC
T ss_pred hhHHHHHHHHHh------CCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCC
Confidence 345555555555 69999999999999986544 7788888877 9999999998753
No 184
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.98 E-value=3e-06 Score=85.54 Aligned_cols=39 Identities=31% Similarity=0.457 Sum_probs=35.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
++||+|||||++|++||..|++.|+ +|+|+|++ .+||.+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~-~V~liE~~-~~gG~~ 41 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGL-STAIVEPK-YWGGVC 41 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC-CCCCcc
Confidence 5799999999999999999999999 69999998 677644
No 185
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.97 E-value=3.2e-05 Score=77.93 Aligned_cols=43 Identities=14% Similarity=0.214 Sum_probs=36.4
Q ss_pred cccceeeCceeEEEEEcCCceEEEeC-C--Cc--EEEcCEEEEecChH
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTE-D--GC--VYEANYVILSASIG 253 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~-~--G~--~~~ad~VI~A~p~~ 253 (496)
.|++++++++|++|+.+++++.|++. + |+ ++.+|.||+|++..
T Consensus 223 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 223 EGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp TTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEE
T ss_pred cCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcc
Confidence 58999999999999988777777765 6 76 89999999998653
No 186
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.97 E-value=4.7e-06 Score=88.04 Aligned_cols=41 Identities=24% Similarity=0.537 Sum_probs=37.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
.++||+|||||++||+||..|++.|+ +|+|+|+++.+||..
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~-~V~lie~~~~~gg~~ 412 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHSEIGGQF 412 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSSSCTTH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCCCCCCee
Confidence 46799999999999999999999999 799999999999854
No 187
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.93 E-value=5.9e-06 Score=82.95 Aligned_cols=40 Identities=30% Similarity=0.483 Sum_probs=34.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCCcEEEEeeCCCCCeE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAEN--GIEDILILEASDRIGGR 45 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~--G~~~V~vlEa~~~~GGr 45 (496)
+++||+|||||++||+||+.|++. |. +|+|+|+++.+++.
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~-~V~vie~~~~~~~~ 43 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEW-DVKVFEATEWVSHA 43 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTS-EEEEECSSSCCC--
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCC-CEEEEECCCccccC
Confidence 357999999999999999999998 78 79999999987754
No 188
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.91 E-value=4.3e-06 Score=82.85 Aligned_cols=36 Identities=17% Similarity=0.325 Sum_probs=32.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHH---CCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAE---NGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~---~G~~~V~vlEa~~~~ 42 (496)
++||+|||||++||+||+.|++ .|. +|+|+|+++..
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~-~V~vie~~~~~ 39 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKA-DVKVINKSRFS 39 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGS-EEEEEESSSEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCC-eEEEEeCCCCc
Confidence 3689999999999999999999 899 79999998843
No 189
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.90 E-value=6.6e-06 Score=90.88 Aligned_cols=41 Identities=34% Similarity=0.590 Sum_probs=37.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEE
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRV 46 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~ 46 (496)
.+||+|||||+|||+||+.|+++|+++|+|+|+.+++||.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 57999999999999999999999982299999999999964
No 190
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.90 E-value=7.6e-06 Score=85.58 Aligned_cols=37 Identities=14% Similarity=0.234 Sum_probs=33.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHC------CCCcEEEEeeCCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAEN------GIEDILILEASDRIG 43 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~------G~~~V~vlEa~~~~G 43 (496)
.+||+|||||+|||+||+.|+++ |. +|+|||+....+
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~-~V~vleK~~~~~ 64 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEA-KILLVDKASLER 64 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTC-CEEEECSSCTTT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCC-cEEEEEecCCCC
Confidence 47999999999999999999998 99 699999987644
No 191
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.89 E-value=5.5e-06 Score=83.10 Aligned_cols=42 Identities=26% Similarity=0.278 Sum_probs=37.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHH-C------CCCcEEEEeeCCCCCeEEE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAE-N------GIEDILILEASDRIGGRVR 47 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~-~------G~~~V~vlEa~~~~GGr~~ 47 (496)
+++||+|||||++|++||..|++ . |+ +|+|+|+.+.+||.+.
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~-~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDM-AVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCE-EEEEEESSSSCSTHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCC-eEEEEecCCCCCCccc
Confidence 35799999999999999999999 7 99 7999999999998663
No 192
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.88 E-value=6.2e-06 Score=82.27 Aligned_cols=38 Identities=26% Similarity=0.458 Sum_probs=34.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHH--CCCCcEEEEeeCCCCCe
Q 010995 6 RSPVIIIGAGVSGISAGKILAE--NGIEDILILEASDRIGG 44 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~--~G~~~V~vlEa~~~~GG 44 (496)
++||+|||||++||+||+.|++ .|+ +|+|+|+++..++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~-~Vtlie~~~~~~~ 41 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDL-KITLISDRPYFGF 41 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTC-EEEEECSSSEEEC
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCC-eEEEECCCCCCCc
Confidence 4799999999999999999999 789 7999999987654
No 193
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.87 E-value=4.7e-06 Score=84.67 Aligned_cols=40 Identities=30% Similarity=0.509 Sum_probs=36.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEE
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVR 47 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~ 47 (496)
++||+|||||++||+||++|+++ + +|+|+|+++++||.+.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~-~V~vie~~~~~GG~~~ 147 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-L-TVALIEERGWLGGDMW 147 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-C-CEEEECTTSSSSCSGG
T ss_pred cCCEEEECccHHHHHHHHHHHhc-C-CEEEEeCCCCCCCeee
Confidence 36899999999999999999999 8 7999999999998654
No 194
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.86 E-value=7.1e-05 Score=75.15 Aligned_cols=36 Identities=33% Similarity=0.594 Sum_probs=32.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
.++|+|||||.+|+-+|..|++.|. +|+|+|+++++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 205 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAGEI 205 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCCcc
Confidence 4789999999999999999999999 79999987654
No 195
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.85 E-value=5.5e-06 Score=90.83 Aligned_cols=41 Identities=24% Similarity=0.618 Sum_probs=38.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCCeEEE
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIGGRVR 47 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~GGr~~ 47 (496)
.+||+|||||++||+||..|++.|+ +|+|+|+++++||++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~-~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGA-RVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-cEEEEeCCCCCCceec
Confidence 4689999999999999999999999 6999999999999877
No 196
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.84 E-value=9.8e-06 Score=81.39 Aligned_cols=41 Identities=20% Similarity=0.262 Sum_probs=37.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCC--CCcEEEEeeCCCCCeEE
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENG--IEDILILEASDRIGGRV 46 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G--~~~V~vlEa~~~~GGr~ 46 (496)
..+||+|||||++|++||..|++.| + +|+|+|+.+.+||++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~-~V~vie~~~~~gg~~ 47 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRA-HVDIYEKQLVPFGLV 47 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSC-EEEEECSSSSSCTHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCC-CEEEEeCCCcCCcee
Confidence 4679999999999999999999998 8 799999999998865
No 197
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.83 E-value=1.4e-05 Score=79.14 Aligned_cols=43 Identities=23% Similarity=0.420 Sum_probs=34.5
Q ss_pred CCC-CCCCCEEEECCCHHHHHHHHHHHHCCCC-cEEEEeeCCCCC
Q 010995 1 MDS-TSRSPVIIIGAGVSGISAGKILAENGIE-DILILEASDRIG 43 (496)
Q Consensus 1 m~~-~~~~dVvIIGaGiaGL~aA~~L~~~G~~-~V~vlEa~~~~G 43 (496)
|+. ..++||+|||||++|++||+.|++.|++ +|+|+|+++.++
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 45 (408)
T 2gqw_A 1 MSQEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP 45 (408)
T ss_dssp -----CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC
T ss_pred CCCCCCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc
Confidence 543 3468999999999999999999999982 499999988654
No 198
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.83 E-value=1.1e-05 Score=82.00 Aligned_cols=38 Identities=21% Similarity=0.376 Sum_probs=34.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCC---CCcEEEEeeCCCCCe
Q 010995 6 RSPVIIIGAGVSGISAGKILAENG---IEDILILEASDRIGG 44 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G---~~~V~vlEa~~~~GG 44 (496)
++||+|||||++|++||..|++.| . +|+|+|+++.+|.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~-~V~lie~~~~~~~ 75 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDAN-EIVVFDQNSNISF 75 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGS-EEEEECSSSCCSB
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCC-eEEEEECCCCCCc
Confidence 489999999999999999999988 8 7999999887653
No 199
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.83 E-value=5.4e-05 Score=76.57 Aligned_cols=36 Identities=25% Similarity=0.538 Sum_probs=32.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
.++|+|||||.+|+-+|..|++.|. +|+|+|+++++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 218 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQPQI 218 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCC-EEEEEEeCCcc
Confidence 4689999999999999999999999 79999987643
No 200
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.82 E-value=8.4e-05 Score=74.44 Aligned_cols=36 Identities=31% Similarity=0.598 Sum_probs=32.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..++|+|||||.+|+.+|..|++.|. +|+|+|++++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~ 183 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILDR 183 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCcc
Confidence 46799999999999999999999999 7999998764
No 201
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.79 E-value=1.3e-05 Score=83.63 Aligned_cols=33 Identities=33% Similarity=0.549 Sum_probs=31.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEee
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEA 38 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa 38 (496)
..+||+|||||++||+||..|++.|+ +|+|+|+
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~-~v~liE~ 138 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGA-KTAVLDY 138 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTC-CEEEECC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCC-eEEEEec
Confidence 46899999999999999999999999 6999997
No 202
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.74 E-value=1.8e-05 Score=81.47 Aligned_cols=37 Identities=38% Similarity=0.564 Sum_probs=33.6
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
...+|+||||||.+|+++|++|+++|+ +|+|||+...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~-~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGK-KVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCCC
Confidence 457899999999999999999999999 6999999864
No 203
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.73 E-value=1.9e-05 Score=79.23 Aligned_cols=54 Identities=15% Similarity=0.213 Sum_probs=41.6
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceE-EEeCCCcEEEcCEEEEecChH
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVT-VKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~A~p~~ 253 (496)
.+.+.+.+.+++ .|++|+++++|++|+.+++++. |.+ +|+++.+|.||+|++..
T Consensus 192 ~~~~~l~~~l~~------~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 192 EFTDILAKDYEA------HGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp HHHHHHHHHHHH------TTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEE
T ss_pred hHHHHHHHHHHH------CCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCC
Confidence 345555555555 6999999999999997666675 554 77889999999999754
No 204
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.73 E-value=1.6e-05 Score=79.39 Aligned_cols=35 Identities=31% Similarity=0.615 Sum_probs=32.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHH---CCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAE---NGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~---~G~~~V~vlEa~~~ 41 (496)
++||+|||||++||+||+.|++ .|+ +|+|+|+++.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~-~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGH-EVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGS-EEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcC-EEEEEeCCCC
Confidence 6899999999999999999999 899 7999999874
No 205
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.71 E-value=0.00018 Score=72.53 Aligned_cols=36 Identities=28% Similarity=0.547 Sum_probs=32.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..+|+|||||.+|+-+|..|++.|. +|+|+|+++++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~~ 213 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGA-DVTAVEFLGHV 213 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCC-EEEEEeccCcc
Confidence 4689999999999999999999999 79999987643
No 206
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.70 E-value=0.00019 Score=73.30 Aligned_cols=42 Identities=21% Similarity=0.290 Sum_probs=36.3
Q ss_pred cccceeeCceeEEEEEcCCc----eEEEeCCCc-EEEcCEEEEecCh
Q 010995 211 LDNRLKLNKVVRELQHSRNG----VTVKTEDGC-VYEANYVILSASI 252 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~----v~V~~~~G~-~~~ad~VI~A~p~ 252 (496)
.|++|+++++|++|+.++++ +.|++.+|+ ++.||.||+|++.
T Consensus 268 ~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 268 QGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp TTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred CCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 68999999999999986555 678888887 8999999999864
No 207
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.70 E-value=0.00028 Score=69.71 Aligned_cols=35 Identities=26% Similarity=0.568 Sum_probs=32.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
.++|+|||||.+|+-+|..|++.|. +|+|+|++++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~ 179 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR 179 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-EEEEEEeCCc
Confidence 5789999999999999999999999 7999998663
No 208
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.69 E-value=2.4e-05 Score=78.38 Aligned_cols=36 Identities=28% Similarity=0.319 Sum_probs=33.3
Q ss_pred CCEEEECCCHHHHHHHHHHHHC--CCCcEEEEeeCCCCC
Q 010995 7 SPVIIIGAGVSGISAGKILAEN--GIEDILILEASDRIG 43 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~--G~~~V~vlEa~~~~G 43 (496)
+||+|||||.+|++||..|++. |. +|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~-~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDA-EIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTS-EEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCC-eEEEEECCCccC
Confidence 3899999999999999999998 88 799999998876
No 209
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.69 E-value=0.00023 Score=71.85 Aligned_cols=42 Identities=5% Similarity=0.106 Sum_probs=35.9
Q ss_pred cccceeeCceeEEEEEcCCc--eEEEeCCC-cEEEcCEEEEecCh
Q 010995 211 LDNRLKLNKVVRELQHSRNG--VTVKTEDG-CVYEANYVILSASI 252 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~--v~V~~~~G-~~~~ad~VI~A~p~ 252 (496)
.|++|+++++|++|+.++++ +.|++.+| +++.+|.||+|++.
T Consensus 239 ~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 239 EGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred CCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 58999999999999986554 67888888 78999999999975
No 210
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.68 E-value=0.00018 Score=72.77 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=36.5
Q ss_pred cccceeeCceeEEEEEcCCceEEEeCC----CcEEEcCEEEEecChH
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTED----GCVYEANYVILSASIG 253 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~~----G~~~~ad~VI~A~p~~ 253 (496)
.|++|+++++|++|+.+++++.|++.+ |+++.+|.||+|++..
T Consensus 239 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 239 RFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp GEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred cCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCC
Confidence 689999999999999877777777665 6789999999998754
No 211
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.65 E-value=0.00032 Score=70.31 Aligned_cols=36 Identities=17% Similarity=0.473 Sum_probs=32.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..+|+|||||.+|+-.|..|++.|. +|+|+|+.+++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~~ 184 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNY-NVNLIDGHERV 184 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSST
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCC-EEEEEEcCCch
Confidence 4689999999999999999999999 79999987654
No 212
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.63 E-value=2.2e-05 Score=80.53 Aligned_cols=36 Identities=25% Similarity=0.505 Sum_probs=31.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHH-CCCCcEEEEeeCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAE-NGIEDILILEASDR 41 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~-~G~~~V~vlEa~~~ 41 (496)
..+|+||||||.+|+..|.+|++ .|+ +|+||||.+.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~-~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDS-RVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTS-CEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCC-eEEEEcCCCC
Confidence 46899999999999999999998 678 6999999653
No 213
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.62 E-value=3e-05 Score=78.65 Aligned_cols=55 Identities=16% Similarity=0.180 Sum_probs=44.5
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
.+.+.+.+.+.+ .|++++++++|++|+.+++++.|++.+|+++.||.||+|++..
T Consensus 227 ~~~~~~~~~l~~------~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 227 YLSNWTMEKVRR------EGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHHHHHHT------TTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHh------cCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCC
Confidence 344455555555 7999999999999998777778888899899999999999754
No 214
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.62 E-value=0.00039 Score=70.44 Aligned_cols=36 Identities=17% Similarity=0.290 Sum_probs=32.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHC---CCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAEN---GIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~---G~~~V~vlEa~~~~ 42 (496)
..+|+|||||..|+-.|..|++. |. +|+|+|+++++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~-~Vtlv~~~~~~ 229 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGG-KVTLCYRNNLI 229 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTC-EEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCC-eEEEEEcCCcc
Confidence 46899999999999999999999 99 79999987654
No 215
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.61 E-value=0.00035 Score=70.91 Aligned_cols=36 Identities=25% Similarity=0.449 Sum_probs=33.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..+|+|||||.+|+-.|..|++.|. +|+|+|+++++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~-~Vtlv~~~~~~ 211 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGNRI 211 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSSS
T ss_pred CCeEEEECChHHHHHHHHHHHHcCC-eEEEEecCCcc
Confidence 5689999999999999999999999 79999997764
No 216
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.59 E-value=4e-05 Score=75.59 Aligned_cols=42 Identities=14% Similarity=0.068 Sum_probs=34.5
Q ss_pred cccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecCh
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASI 252 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~ 252 (496)
.|++++++++|..++.+++...|.+.+|+++.+|.||+++|.
T Consensus 215 ~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 215 ALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp CSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCE
T ss_pred cCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCc
Confidence 678888888888888877777788888888888888887653
No 217
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.59 E-value=0.00017 Score=72.48 Aligned_cols=35 Identities=23% Similarity=0.530 Sum_probs=32.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..+|+|||||.+|+.+|..|++.|. +|+|+|++++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~ 205 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARER 205 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEEcCCc
Confidence 4689999999999999999999999 7999998654
No 218
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.57 E-value=0.00043 Score=69.58 Aligned_cols=43 Identities=21% Similarity=0.242 Sum_probs=35.7
Q ss_pred cccceeeCceeEEEEEcCCceEEEeC-CC--cEEEcCEEEEecChH
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTE-DG--CVYEANYVILSASIG 253 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~-~G--~~~~ad~VI~A~p~~ 253 (496)
.|++++++++|++|+.+++++.|.+. +| +++.+|.||+|++..
T Consensus 225 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 225 LGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp HTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEE
T ss_pred cCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCC
Confidence 58999999999999987777777654 56 679999999998754
No 219
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.54 E-value=5e-05 Score=77.21 Aligned_cols=39 Identities=26% Similarity=0.447 Sum_probs=34.7
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCC
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIG 43 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~G 43 (496)
...+|++|||||.+|+++|+.|++.|. +|+|+|+..+.+
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~-~v~~~e~~~~~~ 41 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGV-QTLMLEMGQLWN 41 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCC-cEEEEeCCCCCC
Confidence 356899999999999999999999999 699999987654
No 220
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.54 E-value=2.6e-05 Score=79.92 Aligned_cols=37 Identities=27% Similarity=0.419 Sum_probs=32.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIG 43 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~G 43 (496)
..+|+||||||.+|+.+|.+|++ |. +|+|||+....+
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~-~VlvLEaG~~~~ 61 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KY-KVLVLERGSLPT 61 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TS-CEEEECSSBCGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CC-cEEEEecCCCcC
Confidence 35799999999999999999999 99 699999976543
No 221
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.54 E-value=0.00027 Score=71.57 Aligned_cols=35 Identities=23% Similarity=0.345 Sum_probs=30.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHH----CCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAE----NGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~----~G~~~V~vlEa~~~ 41 (496)
..+|+|||||.+|+-+|..|++ .|. +|+++++.++
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~-~V~~v~~~~~ 218 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGT-EVIQLFPEKG 218 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCC-EEEEEecCcc
Confidence 4689999999999999999987 478 6999987654
No 222
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.54 E-value=0.00057 Score=69.24 Aligned_cols=41 Identities=15% Similarity=0.076 Sum_probs=35.0
Q ss_pred cceeeCceeEEEEEcCCceEEEeC--CC--cEEEcCEEEEecChH
Q 010995 213 NRLKLNKVVRELQHSRNGVTVKTE--DG--CVYEANYVILSASIG 253 (496)
Q Consensus 213 ~~i~~~~~V~~I~~~~~~v~V~~~--~G--~~~~ad~VI~A~p~~ 253 (496)
++|+++++|++|+.+++++.|++. +| +++.+|.||+|++..
T Consensus 229 V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 229 FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCE
T ss_pred cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCc
Confidence 789999999999998888887764 67 679999999999754
No 223
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.52 E-value=6e-05 Score=75.20 Aligned_cols=37 Identities=22% Similarity=0.448 Sum_probs=32.3
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCC-cEEEEeeCCCCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIE-DILILEASDRIG 43 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~-~V~vlEa~~~~G 43 (496)
++|||||||.+|++||..|++.|.+ +|+|+|+++..+
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~ 38 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMS 38 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCC
Confidence 4699999999999999999999852 599999987654
No 224
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.50 E-value=0.00071 Score=68.51 Aligned_cols=36 Identities=19% Similarity=0.514 Sum_probs=32.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..++|+|||||.+|+-+|..|++.|. +|+|+|++++
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~-~Vtlv~~~~~ 228 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGK-EVVLIDVVDT 228 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC-eEEEEEcccc
Confidence 45789999999999999999999999 7999998654
No 225
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.49 E-value=5.1e-05 Score=73.85 Aligned_cols=34 Identities=26% Similarity=0.476 Sum_probs=30.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..||+|||||++|++||..|++.| + |+|+|+++.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~-V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-E-VTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-E-EEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-C-EEEEECCCC
Confidence 479999999999999999999999 4 999999774
No 226
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.48 E-value=0.00066 Score=68.26 Aligned_cols=42 Identities=7% Similarity=0.062 Sum_probs=35.7
Q ss_pred cccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
.|++|+++++|++|+.+++.+.|.+.+ .++.+|.||+|++..
T Consensus 229 ~Gv~i~~~~~v~~i~~~~~~~~v~~~~-~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 229 EGIEVLEHTQASQVAHMDGEFVLTTTH-GELRADKLLVATGRT 270 (467)
T ss_dssp TTCEEETTCCEEEEEEETTEEEEEETT-EEEEESEEEECSCEE
T ss_pred CCCEEEcCCEEEEEEEeCCEEEEEECC-cEEEcCEEEECCCCC
Confidence 589999999999999877777777764 589999999999764
No 227
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.46 E-value=7.2e-05 Score=74.49 Aligned_cols=34 Identities=26% Similarity=0.438 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHCC--CCcEEEEeeCCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENG--IEDILILEASDR 41 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G--~~~V~vlEa~~~ 41 (496)
++|||||||.+|++||+.|++.+ + +|||+|+++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~-~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDL-KITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTC-EEEEECSSSE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCC-eEEEEcCCCC
Confidence 57999999999999999999876 6 7999999874
No 228
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.45 E-value=0.0011 Score=66.52 Aligned_cols=43 Identities=16% Similarity=0.215 Sum_probs=36.3
Q ss_pred cccceeeCceeEEEEEcCCceEEEeC---CCc--EEEcCEEEEecChH
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTE---DGC--VYEANYVILSASIG 253 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~---~G~--~~~ad~VI~A~p~~ 253 (496)
.|++|+++++|++|+.+++++.|++. +|+ ++.+|.||+|+...
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 58899999999999998888877765 664 48999999999754
No 229
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.44 E-value=0.00042 Score=69.81 Aligned_cols=35 Identities=23% Similarity=0.543 Sum_probs=32.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..+|+|||||.+|+-+|..|++.|. +|+|+|++++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtli~~~~~ 211 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASE 211 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCCc
Confidence 4789999999999999999999999 7999998654
No 230
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.44 E-value=5.4e-05 Score=76.83 Aligned_cols=36 Identities=22% Similarity=0.364 Sum_probs=32.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
.+++|||||||.+|++||..|++.++ +|||+|++++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~-~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKY-NVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTC-EEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCC-cEEEECCCCC
Confidence 45689999999999999999999999 7999999864
No 231
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.44 E-value=6.3e-05 Score=77.41 Aligned_cols=37 Identities=35% Similarity=0.501 Sum_probs=33.2
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCC-CCcEEEEeeCCC
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENG-IEDILILEASDR 41 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G-~~~V~vlEa~~~ 41 (496)
...+|+||||||.||+++|.+|++.| . +|+||||.+.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~-~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNV-TVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTS-CEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCC-cEEEEecCCC
Confidence 35689999999999999999999998 7 6999999764
No 232
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.38 E-value=0.0011 Score=62.80 Aligned_cols=34 Identities=18% Similarity=0.391 Sum_probs=31.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+|+|||+|.+|+-.|..|++.|. +|+++++++
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~-~Vtlv~~~~ 178 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIAS-EVHLIHRRD 178 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSS-EEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCC-eEEEEEeCC
Confidence 4689999999999999999999999 799998754
No 233
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.37 E-value=8.2e-05 Score=76.55 Aligned_cols=35 Identities=31% Similarity=0.626 Sum_probs=31.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAEN-GIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~-G~~~V~vlEa~~ 40 (496)
..+|+||||||.||+++|.+|++. +. +|+||||.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~-~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNI-SVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTC-CEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCC-cEEEEecCC
Confidence 468999999999999999999975 78 699999976
No 234
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.35 E-value=0.00013 Score=74.14 Aligned_cols=38 Identities=32% Similarity=0.510 Sum_probs=34.0
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
...+|++|||||.+|+++|++|++.|. +|+|+|+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~-~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGI-PTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCC-cEEEEECCCCC
Confidence 346899999999999999999999999 69999998653
No 235
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.34 E-value=0.0008 Score=67.92 Aligned_cols=36 Identities=28% Similarity=0.496 Sum_probs=32.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..++|+|||||.+|+-+|..|++.|. +|+|+|++++
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~ 220 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGK-KVRMIERNDH 220 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTC-EEEEECCGGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCC-eEEEEEeCCc
Confidence 46789999999999999999999999 7999998653
No 236
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.24 E-value=0.00015 Score=74.44 Aligned_cols=37 Identities=22% Similarity=0.428 Sum_probs=33.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCcEEEEeeCCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAEN-GIEDILILEASDRI 42 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~-G~~~V~vlEa~~~~ 42 (496)
..+|++|||||.+|+++|++|++. |. +|+|||+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~-~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAV-SVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTS-CEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCC-CEEEEecCCcC
Confidence 458999999999999999999998 89 69999998654
No 237
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.23 E-value=0.00019 Score=74.28 Aligned_cols=37 Identities=27% Similarity=0.431 Sum_probs=33.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHH-CCCCcEEEEeeCCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAE-NGIEDILILEASDRI 42 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~-~G~~~V~vlEa~~~~ 42 (496)
..+|+||||||.+|+++|++|++ .|. +|+|||+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~-~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKI-KVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTC-CEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCC-cEEEEecCCcc
Confidence 45899999999999999999999 799 69999997643
No 238
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.21 E-value=9.9e-05 Score=75.75 Aligned_cols=36 Identities=28% Similarity=0.410 Sum_probs=32.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHH-CCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAE-NGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~-~G~~~V~vlEa~~~~ 42 (496)
.+|+||||||.||+.+|.+|++ .|. +|+||||.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~-~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDV-SVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTC-CEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCC-cEEEEecCCcc
Confidence 5899999999999999999998 689 69999997654
No 239
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.18 E-value=0.0021 Score=64.76 Aligned_cols=34 Identities=24% Similarity=0.379 Sum_probs=31.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+|+|||||.+|+-+|..|++.|. +|+|+++.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~ 220 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD 220 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCC-eEEEEEeCC
Confidence 4689999999999999999999999 799999754
No 240
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.06 E-value=0.0021 Score=61.22 Aligned_cols=34 Identities=26% Similarity=0.543 Sum_probs=30.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+|+|||+|.+|+-+|..|++.|. +|+++++++
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~-~v~~v~~~~ 206 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGS-KVFMLVRKD 206 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSS-EEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC-EEEEEEcCC
Confidence 5679999999999999999999999 799998754
No 241
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.05 E-value=0.003 Score=60.15 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=30.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+|+|||+|.+|+-.|..|++.|. +|+++++++
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~-~V~~v~~~~ 185 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTAR-RITLIHRRP 185 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSS-EEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCC-EEEEEEcCC
Confidence 4689999999999999999999999 799998754
No 242
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.98 E-value=0.0047 Score=62.25 Aligned_cols=32 Identities=19% Similarity=0.407 Sum_probs=29.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEee
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEA 38 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa 38 (496)
..+|+|||||.+|+-.|..|++.|. +|+|+++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~ 218 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGY-EPTVMVR 218 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-EEEEEeC
Confidence 4679999999999999999999999 7999986
No 243
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.86 E-value=0.0027 Score=61.30 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=31.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..+|+|||+|.+|+-.|..|++.|. +|++++++++
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~-~V~lv~~~~~ 197 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAA-SVTLVHRGHE 197 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSS-EEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCC-EEEEEEcCCC
Confidence 4689999999999999999999999 7999997653
No 244
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.83 E-value=0.0088 Score=60.34 Aligned_cols=33 Identities=18% Similarity=0.388 Sum_probs=30.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+|+|||||.+|+-.|..|++.|. +|+++|+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~-~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGL-DTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-ceEEEEcC
Confidence 4679999999999999999999999 69999863
No 245
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.75 E-value=0.0069 Score=57.11 Aligned_cols=35 Identities=23% Similarity=0.458 Sum_probs=30.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
...+|+|||+|.+|+-+|..|++.|. +|+++++++
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~-~v~~~~~~~ 187 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYST-KVYLIHRRD 187 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSS-EEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCC-eEEEEEeCC
Confidence 35689999999999999999999999 699998754
No 246
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.64 E-value=0.0023 Score=52.52 Aligned_cols=39 Identities=26% Similarity=0.461 Sum_probs=31.5
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
|+..++.+|+|+|+|-.|...|..|.++|+ +|+++|.++
T Consensus 1 m~~~~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~ 39 (141)
T 3llv_A 1 MTENGRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSK 39 (141)
T ss_dssp -----CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCH
Confidence 544456789999999999999999999999 699999853
No 247
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.52 E-value=0.002 Score=60.60 Aligned_cols=39 Identities=26% Similarity=0.489 Sum_probs=30.8
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
|+++...+|+|||||..|-.-|..++.+|+ +|+|+|.++
T Consensus 1 Ma~p~~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~ 39 (319)
T 3ado_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEP 39 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCH
T ss_pred CCCCCCCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCH
Confidence 777788899999999999999999999999 699999743
No 248
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.42 E-value=0.0035 Score=66.21 Aligned_cols=35 Identities=17% Similarity=0.300 Sum_probs=31.1
Q ss_pred CCCEEEEC--CCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIG--AGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIG--aGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..+|+||| +|.+|+-+|..|++.|. +|+++++.++
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~-~Vtlv~~~~~ 559 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGY-EVSIVTPGAQ 559 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCC-eeEEEecccc
Confidence 45699999 99999999999999999 7999997553
No 249
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.41 E-value=0.0025 Score=62.14 Aligned_cols=36 Identities=22% Similarity=0.348 Sum_probs=33.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
.++|+|||||.+|+-+|..|++.|. +|+|+|+++++
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~-~Vtvv~~~~~~ 181 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGT-PASIGIILEYP 181 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTC-CEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-eEEEEEcCCcc
Confidence 4689999999999999999999999 69999998765
No 250
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.35 E-value=0.0024 Score=60.19 Aligned_cols=36 Identities=22% Similarity=0.454 Sum_probs=32.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
.++|+|||||..|+-+|..|++.|. +|+|+|+++++
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~-~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFAD-KVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCS-EEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC-EEEEEeccccc
Confidence 4689999999999999999999999 79999987653
No 251
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.13 E-value=0.0058 Score=51.06 Aligned_cols=35 Identities=14% Similarity=0.433 Sum_probs=31.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
...+|+|||+|..|...|..|.+.|+ +|++++++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH
Confidence 45689999999999999999999999 799999864
No 252
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.10 E-value=0.0058 Score=50.03 Aligned_cols=38 Identities=26% Similarity=0.331 Sum_probs=30.7
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
|...++.+|+|+|+|-.|...|..|.+.|+ +|++++++
T Consensus 1 m~~~~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~ 38 (144)
T 2hmt_A 1 MGRIKNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDIN 38 (144)
T ss_dssp -----CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESC
T ss_pred CCCCcCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 444456789999999999999999999999 69999875
No 253
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.08 E-value=0.0097 Score=48.70 Aligned_cols=35 Identities=23% Similarity=0.415 Sum_probs=31.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+.+|+|||+|-.|...|..|.+.|+ +|+++|+++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCH
Confidence 35689999999999999999999999 699999864
No 254
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.00 E-value=0.0065 Score=59.23 Aligned_cols=37 Identities=19% Similarity=0.454 Sum_probs=34.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIG 43 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~G 43 (496)
.++|+|||||.+|+.+|..|++.|. +|+|+|+.+++.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~~ 181 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGY-QLDVVAPCEQVM 181 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-eEEEEecCcchh
Confidence 5789999999999999999999999 799999988654
No 255
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.94 E-value=0.006 Score=57.61 Aligned_cols=39 Identities=26% Similarity=0.489 Sum_probs=30.7
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
|++....+|.|||+|..|.+-|..|+++|+ +|++++.++
T Consensus 1 m~~~~~~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~ 39 (319)
T 2dpo_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEP 39 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCH
T ss_pred CCCCCCceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 666566889999999999999999999999 699998753
No 256
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.94 E-value=0.0056 Score=59.26 Aligned_cols=35 Identities=29% Similarity=0.485 Sum_probs=32.2
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
.+|+|||||.+|+-+|..|++.|. +|+|+|+++++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCCee
Confidence 689999999999999999999999 79999987653
No 257
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.81 E-value=0.0078 Score=60.00 Aligned_cols=35 Identities=23% Similarity=0.408 Sum_probs=32.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..++|.|||.|.+|+++|..|+++|+ +|++.|.++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~-~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGA-IVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTC-EEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEeCCc
Confidence 46789999999999999999999999 799999865
No 258
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.74 E-value=0.0083 Score=59.84 Aligned_cols=37 Identities=24% Similarity=0.377 Sum_probs=33.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIG 43 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~G 43 (496)
..+|+|||||.+|+-+|..|++.|. +|+|+|+++++.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~l 203 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFDAPL 203 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCC-EEEEEEeCCchh
Confidence 4689999999999999999999999 799999988653
No 259
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.73 E-value=0.007 Score=56.96 Aligned_cols=34 Identities=21% Similarity=0.475 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.++|+|||||..|+-+|..|++.|. +|+|+|+.+
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~-~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGS-KVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSS-EEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCC-eeeeecccc
Confidence 4689999999999999999999999 799999754
No 260
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.66 E-value=0.011 Score=47.98 Aligned_cols=34 Identities=32% Similarity=0.542 Sum_probs=30.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+|+|||+|..|...|..|.+.|+ +|++++++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH
Confidence 3579999999999999999999999 799999753
No 261
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.54 E-value=0.012 Score=46.27 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=31.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCC-CCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENG-IEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G-~~~V~vlEa~~ 40 (496)
.+.+|+|+|+|..|...+..|.+.| + +|++++++.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~-~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNY-SVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSE-EEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCc-eEEEEeCCH
Confidence 3568999999999999999999999 8 799998753
No 262
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.53 E-value=0.011 Score=59.16 Aligned_cols=37 Identities=32% Similarity=0.496 Sum_probs=33.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIG 43 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~G 43 (496)
..+|+|||||.+|+-+|..|++.|. +|+|+|+++++.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~-~Vtlv~~~~~~l 202 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGS-EVTVVALEDRLL 202 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC-EEEEEEcCCccc
Confidence 4689999999999999999999999 799999987653
No 263
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.51 E-value=0.02 Score=47.57 Aligned_cols=34 Identities=15% Similarity=0.304 Sum_probs=31.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
.+.+|+|+|+|-.|...|..|.+.|+ +|+++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 35689999999999999999999999 69999985
No 264
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.36 E-value=0.015 Score=57.59 Aligned_cols=36 Identities=17% Similarity=0.505 Sum_probs=33.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..+|+|||||.+|+-+|..|++.|. +|+|+|+.+++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~-~Vtlv~~~~~~ 184 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAARV 184 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-EEEEEEeCCcc
Confidence 5789999999999999999999999 79999998765
No 265
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.36 E-value=0.015 Score=57.08 Aligned_cols=37 Identities=27% Similarity=0.516 Sum_probs=34.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIG 43 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~G 43 (496)
.++|+|||+|.+|+-+|..|++.|. +|+|+|+.+++-
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtvv~~~~~~l 179 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGL-SVTILEAGDELL 179 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-eEEEEecCCccc
Confidence 5789999999999999999999999 799999988764
No 266
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.28 E-value=0.012 Score=58.43 Aligned_cols=37 Identities=22% Similarity=0.431 Sum_probs=33.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
+.++|.|||.|.+|+++|..|+++|+ +|++.|.++..
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~-~v~~~D~~~~~ 40 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRMTP 40 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTC-CCEEEESSSSC
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCC-EEEEEECCCCc
Confidence 45789999999999999999999999 69999997654
No 267
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.27 E-value=0.015 Score=57.69 Aligned_cols=36 Identities=28% Similarity=0.481 Sum_probs=32.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..+|+|||||..|+-.|..|++.|. +|+|+|+++++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~-~Vtlv~~~~~l 182 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGL-HPTLIHRSDKI 182 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSCC
T ss_pred CcEEEEECCccchhhhHHHHHhcCC-cceeeeeeccc
Confidence 4689999999999999999999999 79999987653
No 268
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=95.16 E-value=0.019 Score=57.17 Aligned_cols=37 Identities=27% Similarity=0.550 Sum_probs=33.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..++|+|||||.+|+-+|..|++.|. +|+|+|+++++
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~~ 183 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGK-NVTMIVRGERV 183 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSST
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCC-eEEEEEcCCcc
Confidence 34689999999999999999999999 79999987643
No 269
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=95.08 E-value=0.017 Score=55.58 Aligned_cols=43 Identities=9% Similarity=0.187 Sum_probs=35.0
Q ss_pred cc-cceeeCceeEEEEEcCCceEEEeCCCcEEE-cCEEEEecChH
Q 010995 211 LD-NRLKLNKVVRELQHSRNGVTVKTEDGCVYE-ANYVILSASIG 253 (496)
Q Consensus 211 ~g-~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~-ad~VI~A~p~~ 253 (496)
.| ++++++++|.+|+.+++++.|.+.+|+.+. +|.||+|++..
T Consensus 227 ~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 227 GARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFD 271 (369)
T ss_dssp TCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBC
T ss_pred CCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccC
Confidence 55 899999999999877777778888887665 59999998653
No 270
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.00 E-value=0.028 Score=48.22 Aligned_cols=34 Identities=29% Similarity=0.354 Sum_probs=30.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAEN-GIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~-G~~~V~vlEa~~ 40 (496)
..+|+|||+|..|...|..|.+. |+ +|+++|++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCH
Confidence 45899999999999999999999 99 699999854
No 271
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.91 E-value=0.022 Score=53.45 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=31.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
.++|+|||+|.+|+-.|..|++.|. +|++++++++
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~ 177 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICK-KVYLIHRRDG 177 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSS-EEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC-EEEEEeeCCc
Confidence 4789999999999999999999999 7999998664
No 272
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.84 E-value=0.027 Score=52.73 Aligned_cols=34 Identities=21% Similarity=0.484 Sum_probs=30.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
.+.+|.|||+|..|.+.|..|+++|+ +|++++++
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~ 47 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQT 47 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 34679999999999999999999999 79999874
No 273
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.84 E-value=0.027 Score=55.44 Aligned_cols=36 Identities=31% Similarity=0.640 Sum_probs=33.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..+|+|||+|.+|+-+|..|++.|. +|+++|+.+++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtvv~~~~~~ 187 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGV-NVTLLEALPRV 187 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCC-eEEEEecCCch
Confidence 5789999999999999999999999 79999998876
No 274
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=94.80 E-value=0.025 Score=56.69 Aligned_cols=43 Identities=12% Similarity=0.139 Sum_probs=34.8
Q ss_pred cccceeeCceeEEEEEcCCceEEEeC--CC--cEEEcCEEEEecChH
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTE--DG--CVYEANYVILSASIG 253 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~--~G--~~~~ad~VI~A~p~~ 253 (496)
.|++|+++++|++|+.+++++.|.+. +| +++.+|.||+|++..
T Consensus 229 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 229 EKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp TCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEE
T ss_pred CCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 58999999999999987777777664 56 579999999998754
No 275
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.79 E-value=0.021 Score=58.29 Aligned_cols=36 Identities=19% Similarity=0.240 Sum_probs=33.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..++|+|||+|.+|+-+|..|++.|. +|+|++++++
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~-~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVE-HLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCS-EEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCC-EEEEEECCCC
Confidence 45789999999999999999999999 7999999875
No 276
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.76 E-value=0.025 Score=56.59 Aligned_cols=36 Identities=19% Similarity=0.222 Sum_probs=32.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..++|+|||+|.+|+-.|..|++.|. +|+|++++++
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~-~V~li~~~~~ 231 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGA-KKLISCYRTA 231 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTC-SEEEEECSSC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCC-eEEEEEECCC
Confidence 35789999999999999999999999 6999998764
No 277
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.71 E-value=0.024 Score=53.13 Aligned_cols=35 Identities=31% Similarity=0.348 Sum_probs=31.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..+|+|||+|.+|+-+|..|++.|. +|++++++++
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~ 178 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVE-HVTLLEFAPE 178 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBS-EEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCC-EEEEEEeCcc
Confidence 4689999999999999999999999 7999998764
No 278
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.70 E-value=0.032 Score=51.74 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=30.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+|.|||+|..|...|..|+++|+ +|++++++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~ 36 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDIN 36 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 5689999999999999999999999 79999874
No 279
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.60 E-value=0.03 Score=54.85 Aligned_cols=36 Identities=25% Similarity=0.572 Sum_probs=33.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
.++|+|||+|.+|+-+|..|++.|. +|+++|+.+++
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtvv~~~~~~ 177 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGL-EVDVVELAPRV 177 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCCcc
Confidence 5689999999999999999999999 79999998765
No 280
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.59 E-value=0.024 Score=57.91 Aligned_cols=37 Identities=30% Similarity=0.471 Sum_probs=33.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..++|+|||+|.+|+-+|..|++.|. +|+|++++++.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~-~Vtv~~r~~~~ 226 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAE-QLFVFQRSANY 226 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBS-EEEEEESSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCC-EEEEEECCCCc
Confidence 35789999999999999999999999 79999998753
No 281
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.59 E-value=0.029 Score=53.59 Aligned_cols=35 Identities=20% Similarity=0.477 Sum_probs=32.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+..+|+|+|||-+|..+|..|...|.++|+|++++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 56789999999999999999999998779999985
No 282
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=94.54 E-value=0.027 Score=56.83 Aligned_cols=36 Identities=31% Similarity=0.609 Sum_probs=32.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..+|+|||||.+|+-.|..|++.|. +|+|+|+.+++
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~~ 233 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGA-KVTVVEFLDTI 233 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-EEEEEeccccc
Confidence 5689999999999999999999999 79999987643
No 283
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=94.54 E-value=0.035 Score=55.32 Aligned_cols=37 Identities=19% Similarity=0.377 Sum_probs=32.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..++|+|||||.+|+-+|..|.+.|.++|++++++++
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 3568999999999999999999999745999988654
No 284
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=94.51 E-value=0.023 Score=58.01 Aligned_cols=37 Identities=22% Similarity=0.396 Sum_probs=33.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..++|+|||+|.+|+-.|..|++.+. +|+|++++++.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~-~Vtv~~r~~~~ 220 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAK-ELYVFQRTPNW 220 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBS-EEEEEESSCCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCC-EEEEEEcCCCc
Confidence 35789999999999999999999998 79999998753
No 285
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=94.51 E-value=0.032 Score=57.32 Aligned_cols=36 Identities=25% Similarity=0.455 Sum_probs=32.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
.++|+|||||.+|+-+|..|++.|. +|+++|+++++
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 186 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGI-KTTLLELADQV 186 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC-cEEEEEcCCcc
Confidence 4689999999999999999999999 79999997654
No 286
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.49 E-value=0.031 Score=53.45 Aligned_cols=35 Identities=17% Similarity=0.437 Sum_probs=32.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+..+|+|+|||.+|..+|..|...|.++|+++|++
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 45689999999999999999999998789999985
No 287
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.49 E-value=0.036 Score=55.22 Aligned_cols=36 Identities=25% Similarity=0.419 Sum_probs=33.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..+|+|||+|.+|+-+|..|++.|. +|+++|+.+++
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~~ 182 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKK-TVHVFESLENL 182 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEEccCcc
Confidence 4689999999999999999999999 79999998865
No 288
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.46 E-value=0.027 Score=53.38 Aligned_cols=36 Identities=25% Similarity=0.546 Sum_probs=32.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..+|+|||+|.+|+-+|..|++.|. +|+++++++++
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~-~V~lv~~~~~~ 194 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGS-KVYIIHRRDAF 194 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSS-EEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHhcCC-eEEEEecCCcC
Confidence 5689999999999999999999999 79999987643
No 289
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=94.45 E-value=0.035 Score=55.53 Aligned_cols=36 Identities=33% Similarity=0.539 Sum_probs=32.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
.++|+|||||.+|+-+|..|++.|. +|+++|+.+++
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 207 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGV-QTHIIEMLDRA 207 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-EEEEEEeCCcC
Confidence 4689999999999999999999999 79999987643
No 290
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.38 E-value=0.036 Score=52.52 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=31.2
Q ss_pred CCCCEEEECCCHHHHH-HHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGIS-AGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~-aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+++|.|||.|-+|++ +|..|.++|+ +|++.|.++
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~-~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGF-EVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCC-EEEEEcCCC
Confidence 4678999999999997 7899999999 799999865
No 291
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=94.38 E-value=0.03 Score=53.19 Aligned_cols=35 Identities=17% Similarity=0.363 Sum_probs=31.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..+|+|||+|.+|+-.|..|++.|. +|++++++++
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~-~V~l~~~~~~ 189 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFAR-SVTLVHRRDE 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCS-EEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCC-eEEEEEcCCc
Confidence 5789999999999999999999999 7999998654
No 292
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.32 E-value=0.041 Score=53.24 Aligned_cols=35 Identities=20% Similarity=0.343 Sum_probs=31.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
...+|+|||+|..|+.+|..|...|. +|++++.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 45789999999999999999999999 799998743
No 293
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=94.29 E-value=0.032 Score=52.68 Aligned_cols=35 Identities=20% Similarity=0.457 Sum_probs=31.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..+|+|||+|.+|+-+|..|++.|. +|++++++++
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~ 186 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFAD-EVTVIHRRDT 186 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCS-EEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC-EEEEEeCCCc
Confidence 4689999999999999999999999 7999998654
No 294
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.28 E-value=0.042 Score=48.59 Aligned_cols=35 Identities=17% Similarity=0.324 Sum_probs=31.6
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
.+.+.|+|||||-.|...|..|.+.|. +|+|+...
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 357889999999999999999999999 69999764
No 295
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=94.23 E-value=0.037 Score=54.98 Aligned_cols=37 Identities=14% Similarity=0.060 Sum_probs=33.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCc-EEEEeeCCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIED-ILILEASDRI 42 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~-V~vlEa~~~~ 42 (496)
..++|+|||+|.+|+-.|..|++.|. + |+|+++++.+
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~-~~V~l~~r~~~~ 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAK-HPIYQSLLGGGD 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSC-SSEEEECTTCCS
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhC-CcEEEEeCCCCc
Confidence 35789999999999999999999998 7 9999987654
No 296
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.15 E-value=0.039 Score=55.61 Aligned_cols=37 Identities=19% Similarity=0.213 Sum_probs=33.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHC---CCCcEEEEeeCCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAEN---GIEDILILEASDRIG 43 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~---G~~~V~vlEa~~~~G 43 (496)
..+|+|||||..|+-+|..|++. |. +|+|+|+++++.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~-~Vtlv~~~~~~l 226 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGG-QVDLAYRGDMIL 226 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTC-EEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcC-eEEEEEcCCCcc
Confidence 46899999999999999999999 99 799999988653
No 297
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.08 E-value=0.03 Score=51.20 Aligned_cols=34 Identities=18% Similarity=0.399 Sum_probs=31.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.+.|+|||||-.|+..|..|.+.|. +|+|++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga-~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCC-EEEEEcCC
Confidence 56789999999999999999999999 79999864
No 298
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=94.04 E-value=0.052 Score=54.43 Aligned_cols=36 Identities=36% Similarity=0.632 Sum_probs=33.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..+|+|||+|.+|+-.|..|++.|. +|+++|+.+++
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 215 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMDKF 215 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-cEEEEecCCCc
Confidence 4689999999999999999999999 79999998765
No 299
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.98 E-value=0.041 Score=52.72 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=31.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
...+|+|||+|..|+.+|..|...|. +|++++++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~ 216 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVR 216 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 45789999999999999999999999 79999874
No 300
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.94 E-value=0.054 Score=54.66 Aligned_cols=37 Identities=22% Similarity=0.469 Sum_probs=33.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIG 43 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~G 43 (496)
..+|+|||||..|+-.|..|++.|. +|+|+|+.+++.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~-~Vtlv~~~~~~l 218 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGV-PVTVVASQDHVL 218 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTC-CEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-eEEEEEcCCccc
Confidence 4789999999999999999999999 699999988764
No 301
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=93.89 E-value=0.057 Score=55.89 Aligned_cols=33 Identities=24% Similarity=0.388 Sum_probs=30.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+|+|||||.+|+-+|..|++.|. +|+|+|++
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGG-DVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-EEEEEECC
Confidence 4589999999999999999999999 69999874
No 302
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=93.87 E-value=0.055 Score=55.06 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=31.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..+++|||||..|+-.|..+++.|. +|||+++...
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~-~VTii~~~~~ 257 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGY-DVTVAVRSIV 257 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTC-CEEEEESSCS
T ss_pred CceEEEECCCHHHHHHHHHHHhcCC-eEEEeccccc
Confidence 5789999999999999999999999 6999987543
No 303
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=93.86 E-value=0.052 Score=56.05 Aligned_cols=37 Identities=24% Similarity=0.496 Sum_probs=33.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRIG 43 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~G 43 (496)
..+|+|||||.+|+-+|..|++.|. +|+++|+.+++.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~l 223 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGI-EVTLVEMANQVM 223 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-eEEEEecCCccc
Confidence 5689999999999999999999999 799999987653
No 304
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.86 E-value=0.05 Score=50.45 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=30.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..++|.|||+|..|-.-|..|+ +|+ +|+++++++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~-~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKH-EVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCC-EEEEEECCH
Confidence 3578999999999999999999 999 799999753
No 305
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.83 E-value=0.062 Score=53.10 Aligned_cols=34 Identities=24% Similarity=0.434 Sum_probs=31.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+|.|||+|..|.+-|..|+++|+ +|+++|.++
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~ 87 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNE 87 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcH
Confidence 3679999999999999999999999 799999865
No 306
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.77 E-value=0.039 Score=51.92 Aligned_cols=35 Identities=29% Similarity=0.366 Sum_probs=31.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..+|+|||+|.+|+-.|..|++.|. +|++++++++
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~-~V~~i~~~~~ 189 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVK-NVTIIEYMPK 189 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBS-EEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCC-cEEEEEcCCc
Confidence 4679999999999999999999999 7999998653
No 307
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=93.70 E-value=0.043 Score=55.73 Aligned_cols=35 Identities=31% Similarity=0.348 Sum_probs=31.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
.++|+|||+|.+|+-+|..|++.|. +|+++|+.++
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~-~Vtlv~~~~~ 389 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVE-HVTLLEFAPE 389 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBS-EEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCC-EEEEEEeCcc
Confidence 4689999999999999999999999 7999998654
No 308
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=93.64 E-value=0.052 Score=54.12 Aligned_cols=36 Identities=17% Similarity=0.407 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHH--------------------HCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILA--------------------ENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~--------------------~~G~~~V~vlEa~~~ 41 (496)
..+|+|||+|.+|+-+|..|+ +.|.++|+|+++++.
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 578999999999999999999 568746999998654
No 309
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.63 E-value=0.059 Score=50.88 Aligned_cols=33 Identities=30% Similarity=0.532 Sum_probs=30.5
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+|+|||+|..|.+.|..|+++|. +|+++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCh
Confidence 579999999999999999999999 799998864
No 310
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.60 E-value=0.06 Score=47.61 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=29.7
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 8 PVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
+|+|||+|-.|...|..|.++|+ +|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH
Confidence 59999999999999999999999 699999754
No 311
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.54 E-value=0.058 Score=50.73 Aligned_cols=33 Identities=33% Similarity=0.559 Sum_probs=29.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+|.|||+|-.|.+.|..|+++|. +|+++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcCc
Confidence 579999999999999999999999 799998754
No 312
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.52 E-value=0.073 Score=46.77 Aligned_cols=36 Identities=19% Similarity=0.346 Sum_probs=31.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
...+|.|||+|..|.+.|..|+++|+ +|++++++..
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHH
Confidence 35679999999999999999999999 7999998764
No 313
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=93.45 E-value=0.072 Score=53.32 Aligned_cols=36 Identities=36% Similarity=0.618 Sum_probs=33.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAEN-GIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~-G~~~V~vlEa~~~~ 42 (496)
..+|+|||+|.+|+-+|..|++. |. +|+++|+.+++
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~-~Vtlv~~~~~~ 195 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGI-DTTVVELADQI 195 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCC-EEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCC-cEEEEEccCcc
Confidence 57899999999999999999999 99 79999998765
No 314
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.42 E-value=0.068 Score=49.99 Aligned_cols=34 Identities=21% Similarity=0.285 Sum_probs=30.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
++.+|.|||.|..|...|..|+++|+ +|++++++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGL-STWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECC
Confidence 45689999999999999999999999 79999874
No 315
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=93.25 E-value=0.091 Score=53.28 Aligned_cols=33 Identities=21% Similarity=0.444 Sum_probs=30.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+|+|||||.+|+-.|..|++.|. +|+|+|++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~-~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCC-eEEEEecc
Confidence 4579999999999999999999999 69999974
No 316
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.24 E-value=0.086 Score=52.68 Aligned_cols=35 Identities=26% Similarity=0.511 Sum_probs=31.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
+..+|.|||+|..|.+-|..|+++|+ +|+++|.+.
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~-~V~l~D~~~ 38 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGH-QVLLYDISA 38 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-eEEEEECCH
Confidence 35689999999999999999999999 699999753
No 317
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.18 E-value=0.081 Score=52.73 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=30.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+|.|||+|..|...|..|+++|+ +|+++|.++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI-SVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCH
Confidence 3579999999999999999999999 799999754
No 318
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.15 E-value=0.079 Score=50.14 Aligned_cols=36 Identities=25% Similarity=0.513 Sum_probs=31.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+.+|+|||||..|.+.|+.|++.|+-+|+++|.+.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 345899999999999999999999982399999864
No 319
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.15 E-value=0.094 Score=49.85 Aligned_cols=33 Identities=33% Similarity=0.403 Sum_probs=30.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+|+|||+|..|.+.|..|+++|+ +|+++.+.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~-~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE-AINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC-CEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-EEEEEECh
Confidence 4589999999999999999999999 79999874
No 320
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.13 E-value=0.09 Score=50.34 Aligned_cols=33 Identities=27% Similarity=0.525 Sum_probs=30.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.+|.|||+|.-|.+.|..|+++|+ +|++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 4589999999999999999999999 69999874
No 321
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.10 E-value=0.089 Score=49.39 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=31.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
++.+|.|||.|..|...|..|+++|+ +|++++++.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 45689999999999999999999999 799998754
No 322
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=93.07 E-value=0.079 Score=49.46 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=31.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..+|+|||+|.+|+-+|..|++.|. +|++++++++
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~-~v~~~~~~~~ 181 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICS-KIYLIHRRDE 181 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSS-EEEEECSSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCC-EEEEEEeCCC
Confidence 4689999999999999999999999 7999998764
No 323
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.04 E-value=0.08 Score=49.67 Aligned_cols=32 Identities=28% Similarity=0.507 Sum_probs=29.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
.+|.|||+|..|.+.|..|+++|+ +|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECC
Confidence 479999999999999999999999 79999875
No 324
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.03 E-value=0.076 Score=50.10 Aligned_cols=34 Identities=18% Similarity=0.424 Sum_probs=30.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
.+.+|.|||.|..|...|..|+++|+ +|++++++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 34589999999999999999999999 79999875
No 325
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=92.92 E-value=0.091 Score=52.42 Aligned_cols=36 Identities=17% Similarity=0.369 Sum_probs=33.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
.++|+|||+|.+|+-.|..|++.|. +|+++|+.+++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~-~Vt~v~~~~~~ 205 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGV-KTTLIYRGKEI 205 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-eEEEEEcCCcc
Confidence 5689999999999999999999999 79999998764
No 326
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.92 E-value=0.091 Score=48.60 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=30.4
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 8 PVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
+|.|||+|..|.+.|..|+++|+ +|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCcc
Confidence 59999999999999999999999 7999998753
No 327
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.84 E-value=0.094 Score=52.66 Aligned_cols=36 Identities=25% Similarity=0.517 Sum_probs=33.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..+|+|||+|.+|+-.|..|++.|. +|+++|+.+++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~-~Vtli~~~~~~ 226 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGV-KTTLLHRGDLI 226 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCC-eEEEEECCCcc
Confidence 5689999999999999999999999 79999998765
No 328
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.76 E-value=0.091 Score=52.50 Aligned_cols=33 Identities=33% Similarity=0.605 Sum_probs=30.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+|+|||+|..|+..|..|+++|+ +|++++.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CceEEEECcCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 4579999999999999999999999 79999875
No 329
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.75 E-value=0.09 Score=47.59 Aligned_cols=34 Identities=32% Similarity=0.566 Sum_probs=30.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+|+|||+|-.|..+|..|++.|+.+|+|++..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 4689999999999999999999998679999874
No 330
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.71 E-value=0.09 Score=51.59 Aligned_cols=35 Identities=14% Similarity=0.228 Sum_probs=31.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
++.+|+|||.|..||..|..|+++|+ +|+.+|-+.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~-~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGH-RVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCC-cEEEEECCH
Confidence 46789999999999999999999999 799998653
No 331
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.70 E-value=0.09 Score=48.93 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=30.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+|+|||+|--|.+.|..|+++|. +|+++.++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~-~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLP-HTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCT-TCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEecc
Confidence 479999999999999999999999 799999863
No 332
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.69 E-value=0.15 Score=47.66 Aligned_cols=35 Identities=26% Similarity=0.363 Sum_probs=31.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
...+|.|||.|..|...|..|+++|+ +|++++++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 45689999999999999999999999 699998753
No 333
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.65 E-value=0.1 Score=49.23 Aligned_cols=32 Identities=34% Similarity=0.600 Sum_probs=28.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+|+|||+|.-|.+.|..|+++|+ +|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGH-EVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-Ec
Confidence 4679999999999999999999999 79999 64
No 334
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.65 E-value=0.12 Score=46.72 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=31.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
...+|.|||+|..|.+.|..|+++|+ +|++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCh
Confidence 46789999999999999999999999 799998753
No 335
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.56 E-value=0.1 Score=50.83 Aligned_cols=34 Identities=26% Similarity=0.418 Sum_probs=30.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
...+|+|||+|.+|+.+|..|...|. +|++++.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~ 204 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTR 204 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 35789999999999999999999999 79999864
No 336
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.54 E-value=0.11 Score=49.81 Aligned_cols=34 Identities=12% Similarity=0.450 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
|++|+|||||..|..+|+.+++.|+ +|++++..+
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~-~vv~vd~~~ 34 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGM-KVVLVDKNP 34 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCC
Confidence 5779999999999999999999999 699999764
No 337
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.42 E-value=0.093 Score=48.62 Aligned_cols=33 Identities=18% Similarity=0.343 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+|.|||.|..|...|..|+++|+ +|++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC-CEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 479999999999999999999999 699998754
No 338
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.36 E-value=0.11 Score=48.79 Aligned_cols=39 Identities=33% Similarity=0.606 Sum_probs=33.0
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCC-CcEEEEeeC
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENGI-EDILILEAS 39 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G~-~~V~vlEa~ 39 (496)
|.+....+|+|||+|..|-+.|+.|+..|. .+|+++|..
T Consensus 1 m~~~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 1 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp CTTTTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 666667799999999999999999998874 259999874
No 339
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.29 E-value=0.12 Score=51.33 Aligned_cols=33 Identities=18% Similarity=0.447 Sum_probs=30.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+|.|||+|..|+..|..|+++|+ +|++++.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCH
Confidence 479999999999999999999999 799999863
No 340
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.26 E-value=0.13 Score=50.83 Aligned_cols=35 Identities=20% Similarity=0.530 Sum_probs=31.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..++.|||.|..|+..|..|+++|+ +|++++.+..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~-~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGH-EVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 4579999999999999999999999 7999998653
No 341
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.20 E-value=0.13 Score=49.80 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=31.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
...+|+|||+|..|+.+|..|...|. +|++++.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 45789999999999999999999999 699998753
No 342
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.19 E-value=0.12 Score=48.68 Aligned_cols=35 Identities=20% Similarity=0.552 Sum_probs=30.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
+.+|+|||+|..|.+.|..|+++|+.+|++++.++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 46799999999999999999999972499999764
No 343
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.18 E-value=0.1 Score=48.64 Aligned_cols=34 Identities=15% Similarity=0.117 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
+.+|.|||.|..|...|..|+++|+ +|+++++++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 4589999999999999999999999 699998865
No 344
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.14 E-value=0.12 Score=48.75 Aligned_cols=36 Identities=25% Similarity=0.466 Sum_probs=30.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCC-cEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIE-DILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~-~V~vlEa~~ 40 (496)
.+.+|+|||+|-.|.+.|+.|++.|+- +|++++++.
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 345899999999999999999999971 399998753
No 345
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.13 E-value=0.13 Score=49.34 Aligned_cols=33 Identities=21% Similarity=0.349 Sum_probs=30.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.+|.|||+|..|...|..|+++|+ +|++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 3579999999999999999999999 79999874
No 346
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.12 E-value=0.14 Score=49.12 Aligned_cols=33 Identities=30% Similarity=0.558 Sum_probs=30.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+|+|+|+|.+|+.++..|+..|. +|++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~ 199 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDIN 199 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 4789999999999999999999999 79999875
No 347
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.12 E-value=0.13 Score=48.62 Aligned_cols=35 Identities=26% Similarity=0.503 Sum_probs=30.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
+.+|+|||||-.|.+.|..|++.|+-+|+++|...
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 35799999999999999999999972499999764
No 348
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.06 E-value=0.18 Score=44.46 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=29.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
.+.+|.|||+|..|...|..|++.|+ +|++++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~-~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGF-KVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 34679999999999999999999999 69999875
No 349
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=92.05 E-value=0.1 Score=49.11 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=31.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..+|+|||+|.+|+-+|..|++.|. +|++++++++
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~-~v~~~~~~~~ 188 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAK-EVSIIHRRDK 188 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBS-EEEEECSSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCC-eEEEEEecCc
Confidence 4689999999999999999999999 7999998654
No 350
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=92.03 E-value=0.12 Score=51.54 Aligned_cols=36 Identities=22% Similarity=0.542 Sum_probs=30.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHC--------------------CCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAEN--------------------GIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~--------------------G~~~V~vlEa~~~ 41 (496)
..+|+|||+|.+|+-+|..|++. |.++|+|+++++.
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 46899999999999999999974 5447999998754
No 351
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.99 E-value=0.17 Score=47.66 Aligned_cols=35 Identities=11% Similarity=0.542 Sum_probs=30.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
+.+|+|||||-.|.+.|+.|+..|+-+|+++|...
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 46899999999999999999999972499999753
No 352
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.94 E-value=0.058 Score=44.15 Aligned_cols=33 Identities=6% Similarity=0.227 Sum_probs=30.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+|+|||+|-.|...|..|++.|. +|++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCC
Confidence 5689999999999999999999999 59999875
No 353
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.94 E-value=0.15 Score=46.68 Aligned_cols=34 Identities=18% Similarity=0.168 Sum_probs=30.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.+.|+|+|+|-.|.++|+.|++.|. +|+|+.++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECC
Confidence 45689999999999999999999998 79999775
No 354
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.90 E-value=0.12 Score=48.18 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=30.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
++.+|.|||+|..|...|..|+++|+ +|++++++
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~ 35 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLV 35 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 35689999999999999999999999 79999875
No 355
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.86 E-value=0.14 Score=47.36 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+|.|||.|..|...|..|+++|+ +|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 469999999999999999999999 799998754
No 356
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.85 E-value=0.11 Score=48.83 Aligned_cols=36 Identities=19% Similarity=0.248 Sum_probs=29.8
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.+.+|.|||.|..|...|..|+++|+.+|++++++
T Consensus 22 ~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 345689999999999999999999998349999874
No 357
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.80 E-value=0.18 Score=49.27 Aligned_cols=35 Identities=29% Similarity=0.534 Sum_probs=31.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+.+|+|||.|-.|...|..|.+.|+ +|+|+|.+.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~ 37 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDP 37 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCH
Confidence 35679999999999999999999999 699999864
No 358
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=91.79 E-value=0.19 Score=47.68 Aligned_cols=35 Identities=26% Similarity=0.276 Sum_probs=31.3
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+...+|.|||.|..|-+.|..|+++|+ +|++++++
T Consensus 6 ~~~~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~ 40 (341)
T 3ktd_A 6 DISRPVCILGLGLIGGSLLRDLHAANH-SVFGYNRS 40 (341)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHTTC-CEEEECSC
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 445689999999999999999999999 69999864
No 359
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.69 E-value=0.17 Score=47.45 Aligned_cols=35 Identities=29% Similarity=0.624 Sum_probs=30.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+..+|+|||+|..|.+.|+.|+++|+.+|+++|..
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 45689999999999999999999998349999875
No 360
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.63 E-value=0.18 Score=45.89 Aligned_cols=34 Identities=26% Similarity=0.412 Sum_probs=30.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.++|+|||+|-+|-++|+.|++.|. +|+|+.++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL-QVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 5689999999999999999999996 799998764
No 361
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=91.62 E-value=0.18 Score=53.18 Aligned_cols=34 Identities=24% Similarity=0.395 Sum_probs=31.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+|.|||+|..|...|..|+++|+ +|++++.++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~-~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNY-PVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTC-CEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCC-EEEEEECCH
Confidence 4579999999999999999999999 699999764
No 362
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=91.56 E-value=0.15 Score=54.07 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=31.6
Q ss_pred CCCCEEEEC--CCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIG--AGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIG--aGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..++|+||| ||.+|+-+|..|++.|. +|+|+|+++
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~-~Vtlv~~~~ 563 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGH-EVTIVSGVH 563 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCC-EEEEEeccc
Confidence 346899999 99999999999999999 799999865
No 363
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.52 E-value=0.17 Score=47.13 Aligned_cols=35 Identities=20% Similarity=0.217 Sum_probs=31.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..++|+|||+|-+|.++|+.|++.|.++|+|+.++
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 45689999999999999999999997469999875
No 364
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.41 E-value=0.16 Score=47.73 Aligned_cols=39 Identities=26% Similarity=0.498 Sum_probs=30.4
Q ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCC-CcEEEEeeC
Q 010995 1 MDSTSRSPVIIIGAGVSGISAGKILAENGI-EDILILEAS 39 (496)
Q Consensus 1 m~~~~~~dVvIIGaGiaGL~aA~~L~~~G~-~~V~vlEa~ 39 (496)
|....+.+|+|||||-.|.+.|+.|+.+|. .+|.++|..
T Consensus 1 m~~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 1 MNKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 544456789999999999999999999884 258899864
No 365
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=91.37 E-value=0.2 Score=47.24 Aligned_cols=35 Identities=23% Similarity=0.488 Sum_probs=31.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+..+|+|||+|-.|-.+|..|+..|+.+++|++..
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 36789999999999999999999999889999863
No 366
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=91.33 E-value=0.17 Score=45.84 Aligned_cols=34 Identities=32% Similarity=0.514 Sum_probs=31.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+|+|||+|-.|-.+|..|++.|+.+++|++..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 5789999999999999999999998789999864
No 367
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.28 E-value=0.16 Score=49.70 Aligned_cols=33 Identities=24% Similarity=0.485 Sum_probs=29.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+|+|||+|..|+..|..|++ |+ +|++++.+.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~-~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NH-EVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TS-EEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CC-eEEEEecCH
Confidence 3579999999999999999998 99 799999753
No 368
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.24 E-value=0.2 Score=48.23 Aligned_cols=34 Identities=32% Similarity=0.584 Sum_probs=30.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
...+|+|+|+|..|+.+|..|+..|. +|++++++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~ 198 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVN 198 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 35789999999999999999999999 79999875
No 369
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.23 E-value=0.19 Score=47.18 Aligned_cols=35 Identities=37% Similarity=0.531 Sum_probs=29.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC-CcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGI-EDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~-~~V~vlEa~ 39 (496)
++.+|+|||+|-.|.+.|+.|+..|. .+|+++|..
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 35689999999999999999999985 249999875
No 370
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=91.20 E-value=0.12 Score=48.59 Aligned_cols=31 Identities=23% Similarity=0.386 Sum_probs=28.7
Q ss_pred CCEEEECCCHHHHHHHHHHHHC-----C-CCcEEEEee
Q 010995 7 SPVIIIGAGVSGISAGKILAEN-----G-IEDILILEA 38 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~-----G-~~~V~vlEa 38 (496)
.+|.|||+|..|.+.|..|+++ | + +|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~-~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLL-EVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSE-EEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCC-CEEEEEc
Confidence 3799999999999999999999 9 9 7999976
No 371
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=91.18 E-value=0.15 Score=46.76 Aligned_cols=36 Identities=14% Similarity=0.157 Sum_probs=31.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..++|+|||+|-+|-++|+.|++.|.++|+|+.++.
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 457899999999999999999999985599997753
No 372
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.16 E-value=0.18 Score=47.17 Aligned_cols=32 Identities=22% Similarity=0.297 Sum_probs=29.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+|+|||+|-.|.+.|..|+ +|. +|+++.++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~-~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYH-DVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTS-EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCC-ceEEEECCH
Confidence 47999999999999999999 999 799998753
No 373
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=91.15 E-value=0.24 Score=46.10 Aligned_cols=34 Identities=29% Similarity=0.431 Sum_probs=30.7
Q ss_pred CCCEEEEC-CCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIG-AGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIG-aGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+|.||| +|..|.+.|..|++.|+ +|++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGY-PISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECCc
Confidence 45899999 99999999999999999 699998754
No 374
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.14 E-value=0.17 Score=50.34 Aligned_cols=35 Identities=20% Similarity=0.418 Sum_probs=31.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHC-CC-CcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAEN-GI-EDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~-G~-~~V~vlEa~~~ 41 (496)
..+|+|||+|..|+..|..|+++ |+ + |++++.+..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~-V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEK-VLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCE-EEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCe-EEEEECChh
Confidence 45799999999999999999999 98 7 999998754
No 375
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=91.13 E-value=0.15 Score=46.99 Aligned_cols=35 Identities=26% Similarity=0.482 Sum_probs=31.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+..+|+|||+|-.|-.+|..|++.|+.+++|+|..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999998789999863
No 376
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=91.12 E-value=0.19 Score=47.62 Aligned_cols=33 Identities=24% Similarity=0.486 Sum_probs=30.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+|.|||+|..|.+.|..|+++|+ +|+++.++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~-~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGE-EVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 4679999999999999999999999 79999864
No 377
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.07 E-value=0.21 Score=46.83 Aligned_cols=34 Identities=29% Similarity=0.424 Sum_probs=29.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCC-cEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIE-DILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~-~V~vlEa~ 39 (496)
..+|.|||.|..|.+.|..|+++|+. +|++++++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 36899999999999999999999982 38888764
No 378
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=91.05 E-value=0.25 Score=45.22 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=30.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.++|+|+|+|-+|-++|+.|++.|.++|+|+.++
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46789999999999999999999996469998764
No 379
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.04 E-value=0.16 Score=46.57 Aligned_cols=34 Identities=21% Similarity=0.267 Sum_probs=30.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.++|+|+|+|-+|.+.|+.|++.|. +|+|+.++
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~-~v~v~~R~ 151 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQ-NIVLANRT 151 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTC-EEEEEESS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 45689999999999999999999998 79999875
No 380
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=91.01 E-value=0.11 Score=56.96 Aligned_cols=36 Identities=17% Similarity=0.202 Sum_probs=32.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDRI 42 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~~ 42 (496)
..+|+|||+|..|+-+|..|++.|. +|+|+|+++++
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~-~Vtvv~~~~~~ 319 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGG-VVAVIDARSSI 319 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTC-CSEEEESCSSC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCC-cEEEEECCCcc
Confidence 4689999999999999999999999 69999998764
No 381
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.00 E-value=0.18 Score=50.10 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=31.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.+.|+|||+|-+|+..|..|.+.|. +|+|++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga-~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEcCC
Confidence 46789999999999999999999999 79999874
No 382
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=91.00 E-value=0.28 Score=44.31 Aligned_cols=32 Identities=28% Similarity=0.558 Sum_probs=29.7
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 8 PVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+|+|||+|-+|-++++.|.+.|.++|+|+.++
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 89999999999999999999998569999875
No 383
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=90.97 E-value=0.23 Score=45.74 Aligned_cols=35 Identities=20% Similarity=0.407 Sum_probs=31.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.++|+|+|+|-+|-++|+.|++.|.++|+|+.++
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 46789999999999999999999998559999765
No 384
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=90.96 E-value=0.23 Score=45.70 Aligned_cols=35 Identities=17% Similarity=0.331 Sum_probs=31.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..++|+|||+|-+|-++|+.|++.|.++|+|+.++
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46789999999999999999999998569999775
No 385
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.95 E-value=0.12 Score=45.64 Aligned_cols=32 Identities=25% Similarity=0.325 Sum_probs=28.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEE-Eee
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILI-LEA 38 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~v-lEa 38 (496)
+.+|.|||+|..|.+.|..|+++|+ +|++ +++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~-~V~~v~~r 55 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQI-PAIIANSR 55 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTC-CEEEECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 4689999999999999999999999 6988 654
No 386
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=90.95 E-value=0.28 Score=46.00 Aligned_cols=33 Identities=15% Similarity=0.250 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+|.|||+|..|...|..|++.|+ +|++++++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCH
Confidence 679999999999999999999999 699998753
No 387
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=90.93 E-value=0.18 Score=55.54 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=31.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+|+|||||..|+-+|..|++.|.++|+|+++++
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 34899999999999999999999964699999876
No 388
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=90.86 E-value=0.25 Score=46.20 Aligned_cols=35 Identities=23% Similarity=0.294 Sum_probs=31.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.++|+|+|+|-+|-++|+.|++.|.++|+|+.++
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 46789999999999999999999998569999876
No 389
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=90.81 E-value=0.24 Score=49.28 Aligned_cols=35 Identities=14% Similarity=0.266 Sum_probs=31.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+.+|.|||.|..|...|..|+++|+ +|++++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~-~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 45689999999999999999999999 699999864
No 390
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.78 E-value=0.16 Score=50.22 Aligned_cols=31 Identities=23% Similarity=0.427 Sum_probs=29.1
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 8 PVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+|.|||+|..|+..|..|+++|+ +|++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~-~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 59999999999999999999999 79999875
No 391
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=90.73 E-value=0.18 Score=51.33 Aligned_cols=35 Identities=23% Similarity=0.477 Sum_probs=32.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
.++|+|||+|.+|+-.|..|++.|. +|+++++++.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~-~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAA-ELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBS-EEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCc-eEEEEEcCCc
Confidence 5789999999999999999999999 7999998764
No 392
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=90.70 E-value=0.25 Score=48.37 Aligned_cols=33 Identities=33% Similarity=0.676 Sum_probs=30.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC--CcEEEEe
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGI--EDILILE 37 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~--~~V~vlE 37 (496)
+..+|+|+|||-+|.++|+.|.+.|. ++|+|++
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 45789999999999999999999998 5799998
No 393
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.67 E-value=0.24 Score=47.75 Aligned_cols=34 Identities=29% Similarity=0.583 Sum_probs=31.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
...+|+|||+|..|+.+|..|+..|. +|++++++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~ 200 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDIN 200 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 45789999999999999999999999 79999874
No 394
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.66 E-value=0.23 Score=47.55 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=30.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.+|.|||.|..|...|..|+++|+ +|++++++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~ 54 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLN 54 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 4689999999999999999999999 79999875
No 395
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=90.64 E-value=0.3 Score=45.56 Aligned_cols=35 Identities=23% Similarity=0.460 Sum_probs=31.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..++|+|+|+|-+|-++|+.|++.|.++|+|+.++
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 46789999999999999999999998569999876
No 396
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=90.64 E-value=0.16 Score=48.73 Aligned_cols=41 Identities=37% Similarity=0.581 Sum_probs=34.5
Q ss_pred CCCCEEEECC-CHHHHHHHHHHHHCCCC--cEEEEeeCC-CCCeE
Q 010995 5 SRSPVIIIGA-GVSGISAGKILAENGIE--DILILEASD-RIGGR 45 (496)
Q Consensus 5 ~~~dVvIIGa-GiaGL~aA~~L~~~G~~--~V~vlEa~~-~~GGr 45 (496)
...+|+|||| |.+|+.|+..+...|.. +|+++|.+. .-||+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 3678999999 99999999999999972 499999875 44664
No 397
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=90.57 E-value=0.26 Score=45.06 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=30.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
.++|+|||+|-+|-++++.|++.|.++|+|+.++
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4689999999999999999999997569999775
No 398
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=90.50 E-value=0.18 Score=47.77 Aligned_cols=30 Identities=33% Similarity=0.468 Sum_probs=28.4
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCcEEEEee
Q 010995 8 PVIIIGAGVSGISAGKILAENGIEDILILEA 38 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa 38 (496)
+|.|||+|..|.+.|..|+++|+ +|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~-~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCC-eEEEEEc
Confidence 59999999999999999999999 7999987
No 399
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=90.50 E-value=0.14 Score=47.35 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=29.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..++|+|||+|.+|+-.|..|++.| +|+++++++
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g--~v~~v~~~~ 173 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG--ETTFFTNGI 173 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS--EEEEECTTT
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC--cEEEEECCC
Confidence 3578999999999999999999998 499998754
No 400
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.41 E-value=0.23 Score=46.47 Aligned_cols=32 Identities=28% Similarity=0.538 Sum_probs=28.9
Q ss_pred CEEEECCCHHHHHHHHHHHHC--CCCcEEEEeeCC
Q 010995 8 PVIIIGAGVSGISAGKILAEN--GIEDILILEASD 40 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~--G~~~V~vlEa~~ 40 (496)
+|+|||+|..|.+.|..|++. |. +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~-~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLAR-ELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCS-EEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCC-EEEEEeCCh
Confidence 699999999999999999996 67 799999864
No 401
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=90.38 E-value=0.2 Score=50.05 Aligned_cols=33 Identities=24% Similarity=0.439 Sum_probs=29.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAEN--GIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~--G~~~V~vlEa~ 39 (496)
+.+|.|||+|..|+..|..|+++ |+ +|++++.+
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~-~V~~~D~~ 43 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHI-TVTVVDMN 43 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTS-EEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCC-EEEEEECC
Confidence 35899999999999999999998 78 79999874
No 402
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=90.36 E-value=0.2 Score=46.71 Aligned_cols=34 Identities=18% Similarity=0.378 Sum_probs=30.0
Q ss_pred CCCCEEEECCC-HHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAG-VSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaG-iaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..++|+|||+| +.|-.+|..|...|. +|+|++++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gA-tVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCC-EEEEEeCc
Confidence 56789999999 779999999999999 69998654
No 403
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=90.34 E-value=0.22 Score=46.67 Aligned_cols=32 Identities=28% Similarity=0.423 Sum_probs=29.2
Q ss_pred CCEEEECCCHHHHHHHHHHHHCC--CCcEEEEeeC
Q 010995 7 SPVIIIGAGVSGISAGKILAENG--IEDILILEAS 39 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G--~~~V~vlEa~ 39 (496)
.+|+|||+|-.|.+.|..|+++| . +|++++.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~-~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVAD-DYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCS-EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCC-EEEEEcCC
Confidence 46999999999999999999999 6 79999875
No 404
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.34 E-value=0.23 Score=49.59 Aligned_cols=34 Identities=21% Similarity=0.357 Sum_probs=30.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
++.+|.|||+|..|.+.|..|+++|+ +|++++++
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~~r~ 47 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGY-TVSIFNRS 47 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 46789999999999999999999999 69999875
No 405
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.34 E-value=0.23 Score=46.79 Aligned_cols=35 Identities=29% Similarity=0.557 Sum_probs=30.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC-CcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGI-EDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~-~~V~vlEa~ 39 (496)
...+|+|||+|..|.+.|+.|+..|. .+|+++|..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 45689999999999999999999986 259999864
No 406
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=90.30 E-value=0.28 Score=45.14 Aligned_cols=35 Identities=20% Similarity=0.293 Sum_probs=30.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..++|+|+|+|-+|-+.|+.|++.|.++|+|+.++
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 46789999999999999999999996469999775
No 407
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=90.28 E-value=0.33 Score=44.29 Aligned_cols=36 Identities=31% Similarity=0.478 Sum_probs=31.5
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
...++|+|+|||=++-++++.|++.|.++|+|+.+.
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt 158 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPS 158 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC
Confidence 356789999999999999999999998679998753
No 408
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=90.22 E-value=0.32 Score=44.85 Aligned_cols=33 Identities=21% Similarity=0.378 Sum_probs=29.9
Q ss_pred CCCEEEECC-CHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGA-GVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGa-GiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.+|.|||+ |..|.+.|..|+++|+ +|++++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAH-HLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 358999999 9999999999999999 79999864
No 409
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=90.10 E-value=0.27 Score=51.73 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=31.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+|.|||+|..|...|..|+++|+ +|+++|.+.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~-~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGT-PILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCC-EEEEEECCH
Confidence 4579999999999999999999999 699999764
No 410
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.08 E-value=0.24 Score=46.25 Aligned_cols=33 Identities=21% Similarity=0.469 Sum_probs=28.9
Q ss_pred CEEEECCCHHHHHHHHHHHHCCC-CcEEEEeeCC
Q 010995 8 PVIIIGAGVSGISAGKILAENGI-EDILILEASD 40 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~-~~V~vlEa~~ 40 (496)
+|+|||||..|.+.|+.|+.+|+ .+|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999997 1399998753
No 411
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=89.96 E-value=0.22 Score=49.66 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=30.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAEN--GIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~--G~~~V~vlEa~ 39 (496)
+.+|.|||+|..|+..|..|+++ |+ +|++++++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~-~V~~~d~~ 39 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEI-RVTVVDVN 39 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTS-EEEEECSC
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCC-EEEEEECC
Confidence 45799999999999999999999 89 79999875
No 412
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=89.96 E-value=0.34 Score=48.60 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=31.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+|.|||.|..|...|..|+++|+ +|++++++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGF-TVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 5689999999999999999999999 699998854
No 413
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=89.93 E-value=0.27 Score=46.93 Aligned_cols=33 Identities=33% Similarity=0.643 Sum_probs=30.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEee
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEA 38 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa 38 (496)
..+|+|||+|-.|-.+|..|+..|+.+++|++.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~ 150 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDN 150 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECC
Confidence 578999999999999999999999878999986
No 414
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.86 E-value=0.23 Score=47.94 Aligned_cols=33 Identities=15% Similarity=0.293 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHCC-------CCcEEEEeeCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENG-------IEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G-------~~~V~vlEa~~ 40 (496)
.+|.|||+|..|.+.|..|+++| + +|++++++.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~-~V~~~~r~~ 61 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFEN-EVRMWIRDE 61 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCS-CEEEECCSC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCC-eEEEEECCh
Confidence 47999999999999999999999 8 699998764
No 415
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=89.83 E-value=0.25 Score=46.37 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=30.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCC-CCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENG-IEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G-~~~V~vlEa~~ 40 (496)
+.+|.|||.|..|...|..|+++| + +|++++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~-~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAA-RLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCS-EEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCC-eEEEEeCCC
Confidence 457999999999999999999999 9 799999763
No 416
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.70 E-value=0.31 Score=45.85 Aligned_cols=36 Identities=17% Similarity=0.503 Sum_probs=30.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
++.+|+|||||-.|.+.|+.|+..|+.+|+++|..+
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 456899999999999999999999872399998754
No 417
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=89.68 E-value=0.22 Score=46.31 Aligned_cols=34 Identities=21% Similarity=0.469 Sum_probs=28.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+|.+||-|..|..-|..|.++|+ +|++++++.
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~-~V~v~dr~~ 38 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGY-ELVVWNRTA 38 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTC-EEEEC----
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 3579999999999999999999999 799998754
No 418
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=89.65 E-value=0.31 Score=48.18 Aligned_cols=34 Identities=18% Similarity=0.366 Sum_probs=31.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+.|+|+|+|..|.++|..|+..|. +|++.|.+
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~ 297 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEID 297 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 46789999999999999999999999 79999864
No 419
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=89.65 E-value=0.21 Score=47.41 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=29.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+|+|||+|.+|+-+|..|++.| +|++++++.
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~--~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA--ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS--EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC--CEEEEECCC
Confidence 478999999999999999999998 499998763
No 420
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=89.64 E-value=0.23 Score=45.61 Aligned_cols=33 Identities=15% Similarity=0.399 Sum_probs=30.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
.++|+|||+|-.|-+.|+.|.+.|. +|++++++
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r~ 161 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGA-KVFLWNRT 161 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHcCC-EEEEEECC
Confidence 4679999999999999999999999 79999875
No 421
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.63 E-value=0.37 Score=44.83 Aligned_cols=35 Identities=23% Similarity=0.424 Sum_probs=31.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..++|.|||+|-.|..+|..|...|. +|++++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCH
Confidence 46789999999999999999999999 799999753
No 422
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=89.58 E-value=0.1 Score=46.31 Aligned_cols=34 Identities=26% Similarity=0.304 Sum_probs=30.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
.+.+|.|||+|..|-+-|..|+++|+ +|+++.+.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~-~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGH-YVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTC-EEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCC-EEEEecCH
Confidence 44589999999999999999999999 79998873
No 423
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=89.55 E-value=0.27 Score=45.73 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=30.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.+|.|||+|..|...|..|++.|+ +|++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 4579999999999999999999999 79999864
No 424
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=89.50 E-value=0.3 Score=42.66 Aligned_cols=31 Identities=26% Similarity=0.333 Sum_probs=28.4
Q ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 8 PVIIIG-AGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 8 dVvIIG-aGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+|+||| +|-.|...|..|+++|+ +|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 589999 99999999999999999 79999864
No 425
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=89.48 E-value=0.21 Score=48.76 Aligned_cols=30 Identities=23% Similarity=0.478 Sum_probs=28.0
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 8 PVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+|.|||+|..|+..|..|++ |+ +|++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~-~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QN-EVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TS-EEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC-CC-EEEEEECC
Confidence 59999999999999999999 99 79999875
No 426
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.42 E-value=0.37 Score=44.66 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=31.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..++|.|||+|-.|..+|..|...|. +|++++++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGA-KVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCH
Confidence 46789999999999999999999999 799999753
No 427
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=89.35 E-value=0.16 Score=48.80 Aligned_cols=31 Identities=13% Similarity=0.393 Sum_probs=29.0
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 8 PVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+|.|||+|..|.+.|..|+++|+ +|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~-~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEE-EEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 79999999999999999999999 79999864
No 428
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=89.26 E-value=0.18 Score=48.12 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=29.9
Q ss_pred CCEEEECCCHHHHHHHHHHHHCC-------CCcEEEEeeCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENG-------IEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G-------~~~V~vlEa~~ 40 (496)
.+|.|||+|..|.+.|..|+++| + +|++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~-~V~~~~r~~ 48 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDP-RVTMWVFEE 48 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEE-EEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCC-eEEEEEcCh
Confidence 47999999999999999999999 8 799998754
No 429
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.20 E-value=0.49 Score=43.45 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=30.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
+.+|+|.|+|..|...+..|.++|+ +|+++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGH-EVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCc
Confidence 4679999999999999999999999 699998764
No 430
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=89.20 E-value=0.3 Score=45.07 Aligned_cols=32 Identities=25% Similarity=0.313 Sum_probs=28.5
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+|.|||+|..|...|..|++ |+ +|++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCH
Confidence 369999999999999999999 99 699998643
No 431
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.18 E-value=0.28 Score=45.06 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=30.9
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+.+|+|+|||..|...+..|.++|+ +|+++.++.
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcCh
Confidence 35689999999999999999999999 799998754
No 432
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=89.11 E-value=0.34 Score=45.31 Aligned_cols=34 Identities=32% Similarity=0.579 Sum_probs=29.5
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+|+|||||-.|.+.|+.|+..|+-+|+++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 5799999999999999999999951499999753
No 433
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=89.05 E-value=0.29 Score=45.41 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=29.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
.+|.|||+|..|...|..|++.|+ +|++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 479999999999999999999999 79999864
No 434
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.89 E-value=0.4 Score=42.59 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=30.7
Q ss_pred CCCCEEEECC-CHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGA-GVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGa-GiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
+.+.|+|.|| |-.|...+..|.++|+ +|+++.++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECCh
Confidence 4567999998 9999999999999999 799998753
No 435
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.85 E-value=0.42 Score=43.33 Aligned_cols=35 Identities=14% Similarity=0.228 Sum_probs=30.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCC----CCcEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENG----IEDILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G----~~~V~vlEa~~~ 41 (496)
+.+|.|||+|..|.+-|..|+++| + +|++++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~-~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKE-NLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGG-GEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCC-eEEEEeCCcc
Confidence 347999999999999999999999 6 6999988653
No 436
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=88.85 E-value=0.31 Score=45.39 Aligned_cols=36 Identities=22% Similarity=0.549 Sum_probs=29.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCC-cEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIE-DILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~-~V~vlEa~~ 40 (496)
.+.+|+|||||..|-+.|+.|+.+|+- +|+|+|..+
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 346899999999999999999999861 499999765
No 437
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=88.83 E-value=0.42 Score=46.61 Aligned_cols=50 Identities=20% Similarity=0.224 Sum_probs=38.1
Q ss_pred HHHHHHHHhhccCCCCCccccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecCh
Q 010995 193 HLLYKMAEEFLSTSDGKILDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASI 252 (496)
Q Consensus 193 ~l~~~l~~~~~~~~~~~~~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~ 252 (496)
.+.+.+.+.+.+ .|++++++++|++|+.+ + |.+.+|+++++|.||++++.
T Consensus 219 ~~~~~~~~~l~~------~gV~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 219 NSRKAVASIYNQ------LGIKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHH------HTCEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHHHH------CCCEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCC
Confidence 444555555544 69999999999999753 2 66778889999999999864
No 438
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=88.81 E-value=0.38 Score=50.61 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=31.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
-.+|.|||||..|-.-|+.++.+|+ +|+++|.++
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~-~V~l~D~~~ 349 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGI-SVVAVESDP 349 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCC-chhcccchH
Confidence 3689999999999999999999999 799999754
No 439
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.75 E-value=0.17 Score=50.24 Aligned_cols=33 Identities=30% Similarity=0.448 Sum_probs=30.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
-+|+|+|+|-.|.+.|..|.+.|+ +|+|+|..+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~-~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENN-DITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTE-EEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-CEEEEECCH
Confidence 369999999999999999999999 799999864
No 440
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=88.72 E-value=0.26 Score=49.48 Aligned_cols=34 Identities=21% Similarity=0.370 Sum_probs=30.4
Q ss_pred CCCEEEECCCHHHHH-HHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGIS-AGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~-aA~~L~~~G~~~V~vlEa~~ 40 (496)
.++|.|||.|-+|++ +|..|.++|+ +|++.|.++
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~-~V~~~D~~~ 56 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGY-QISGSDLAP 56 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTC-EEEEECSSC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCC-eEEEEECCC
Confidence 468999999999997 6999999999 799999754
No 441
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=88.71 E-value=0.34 Score=46.07 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=31.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEee
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEA 38 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa 38 (496)
+..+|+|||+|-.|..+|..|+..|+.+++|+|.
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~ 68 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDH 68 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEEC
Confidence 3578999999999999999999999988999985
No 442
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.66 E-value=0.35 Score=44.03 Aligned_cols=33 Identities=24% Similarity=0.522 Sum_probs=29.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCc-EEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIED-ILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~-V~vlEa~ 39 (496)
+.+|.|||+|..|...|..|++.|+ + |++++++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~-~~v~~~~~~ 43 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGF-RIVQVYSRT 43 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTC-CEEEEECSS
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCC-eEEEEEeCC
Confidence 4579999999999999999999999 7 8888763
No 443
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=88.62 E-value=0.29 Score=47.62 Aligned_cols=36 Identities=19% Similarity=0.483 Sum_probs=31.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCC-cEEEEeeCCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIE-DILILEASDR 41 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~-~V~vlEa~~~ 41 (496)
.++|||||||.+|++||.+|++.|.. +|+|+|+++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 57899999999999999999987642 6999999875
No 444
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=88.54 E-value=0.36 Score=48.96 Aligned_cols=34 Identities=24% Similarity=0.501 Sum_probs=31.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+|+|||+|-.|-.+|..|+..|+.+++|+|..
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 5789999999999999999999999889999853
No 445
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=88.52 E-value=0.39 Score=44.47 Aligned_cols=32 Identities=31% Similarity=0.460 Sum_probs=29.1
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 8 PVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
+|.|||+|..|...|..|++.|+ +|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC-CEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 59999999999999999999999 699998753
No 446
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=88.50 E-value=0.36 Score=45.37 Aligned_cols=35 Identities=9% Similarity=0.361 Sum_probs=30.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC-CcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGI-EDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~-~~V~vlEa~ 39 (496)
...+|+|||+|..|.+.|+.|+..|+ .+|+++|..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 45689999999999999999999986 259999864
No 447
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=88.49 E-value=0.56 Score=42.62 Aligned_cols=33 Identities=24% Similarity=0.567 Sum_probs=30.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+. +|+|||+|-.|-+.|+.|.+.|. +|++++++
T Consensus 116 ~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r~ 148 (263)
T 2d5c_A 116 KG-PALVLGAGGAGRAVAFALREAGL-EVWVWNRT 148 (263)
T ss_dssp CS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 45 89999999999999999999999 79999876
No 448
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=88.49 E-value=0.44 Score=44.72 Aligned_cols=36 Identities=17% Similarity=0.433 Sum_probs=30.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
++.+|+|||+|..|.+.|+.|+..|..+|+++|..+
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 356899999999999999999999872499998754
No 449
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.44 E-value=0.39 Score=44.02 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=28.4
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 8 PVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+|.|||+|..|.+.|..|.+.|+ +|++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 58999999999999999999999 79999764
No 450
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=88.43 E-value=0.41 Score=48.62 Aligned_cols=35 Identities=23% Similarity=0.488 Sum_probs=31.6
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+..+|+|||+|-.|-.+|..|+..|+.+++|+|..
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D 359 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 359 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 35789999999999999999999999889999863
No 451
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=88.41 E-value=0.47 Score=44.63 Aligned_cols=34 Identities=24% Similarity=0.241 Sum_probs=29.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCC----CCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENG----IEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G----~~~V~vlEa~~ 40 (496)
+.+|.|||+|..|.+-|..|.++| + +|++++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~-~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAH-KIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGG-GEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcc-eEEEECCCc
Confidence 347999999999999999999999 7 699998643
No 452
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=88.39 E-value=0.52 Score=45.01 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=31.3
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
...+.|+|+|+|-.|..+|..|.+.|. +|++.+..
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~ 205 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVN 205 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 456789999999999999999999999 69998853
No 453
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=88.30 E-value=0.46 Score=47.50 Aligned_cols=33 Identities=15% Similarity=0.256 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+|.|||+|..|...|..|+++|+ +|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~-~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 479999999999999999999999 699998753
No 454
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.27 E-value=0.53 Score=44.62 Aligned_cols=33 Identities=30% Similarity=0.403 Sum_probs=29.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+|.|||+|..|.+.|..|++.|+ +|++++++
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~~ 48 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLRS 48 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTC-CEEEECCT
T ss_pred CCEEEEECchHHHHHHHHHHHHCcC-EEEEEECC
Confidence 4579999999999999999999999 69998864
No 455
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=88.23 E-value=0.36 Score=43.78 Aligned_cols=31 Identities=23% Similarity=0.330 Sum_probs=28.4
Q ss_pred CEEEECCCHHHHHHHHHHHHCC-CCcEEEEeeC
Q 010995 8 PVIIIGAGVSGISAGKILAENG-IEDILILEAS 39 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G-~~~V~vlEa~ 39 (496)
+|.|||+|..|.+.|..|++.| + +|++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~-~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGY-RIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSC-EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCCCC-eEEEECCC
Confidence 5999999999999999999999 8 79999864
No 456
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=88.23 E-value=0.5 Score=46.29 Aligned_cols=34 Identities=32% Similarity=0.464 Sum_probs=31.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEee
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEA 38 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa 38 (496)
+..+|+|||+|-.|-.+|..|+..|+.+++|+|.
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~ 72 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDM 72 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEEC
T ss_pred cCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 3578999999999999999999999988999986
No 457
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=88.05 E-value=0.49 Score=44.08 Aligned_cols=37 Identities=22% Similarity=0.406 Sum_probs=31.5
Q ss_pred CCCCCEEEECC-CHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 4 TSRSPVIIIGA-GVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 4 ~~~~dVvIIGa-GiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
.++.+|+|.|| |..|...+..|.++|+ +|+++.++..
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~ 42 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLRV 42 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCSS
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCc
Confidence 34678999998 9999999999999999 6999987643
No 458
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=88.03 E-value=0.43 Score=43.29 Aligned_cols=33 Identities=15% Similarity=0.268 Sum_probs=29.5
Q ss_pred CCCCEEEECCC-HHHHHHHHHHHHCCCCcEEEEee
Q 010995 5 SRSPVIIIGAG-VSGISAGKILAENGIEDILILEA 38 (496)
Q Consensus 5 ~~~dVvIIGaG-iaGL~aA~~L~~~G~~~V~vlEa 38 (496)
..++|+|||+| +.|..+|..|.+.|. .|+++.+
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~ 182 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHS 182 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECT
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeC
Confidence 46789999976 799999999999999 6999975
No 459
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=87.93 E-value=0.48 Score=43.56 Aligned_cols=34 Identities=12% Similarity=0.263 Sum_probs=30.2
Q ss_pred CCCCCEEEECCC-HHHHHHHHHHHHCCCCcEEEEee
Q 010995 4 TSRSPVIIIGAG-VSGISAGKILAENGIEDILILEA 38 (496)
Q Consensus 4 ~~~~dVvIIGaG-iaGL~aA~~L~~~G~~~V~vlEa 38 (496)
...++|+|||+| +.|..+|..|.+.|. .|+++.+
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs 197 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHS 197 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEEC
Confidence 357899999999 789999999999999 6999963
No 460
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.90 E-value=0.53 Score=46.96 Aligned_cols=33 Identities=15% Similarity=0.280 Sum_probs=30.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.+|.|||+|..|..-|..|+++|+ +|++++++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY-TVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcCC
Confidence 4579999999999999999999999 69999875
No 461
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=87.88 E-value=0.5 Score=45.84 Aligned_cols=35 Identities=20% Similarity=0.268 Sum_probs=31.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+.|+|||.|..|..+|..|...|. +|++.|.++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCh
Confidence 46789999999999999999999999 799999743
No 462
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=87.87 E-value=0.38 Score=47.14 Aligned_cols=34 Identities=24% Similarity=0.565 Sum_probs=30.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+..|||.|..|+..|..|+++|+ +|++++.+.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~-~V~~~D~~~ 44 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGV-DVLGVDINQ 44 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCC-EEEEEECCH
Confidence 3578999999999999999999999 799999853
No 463
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.71 E-value=0.61 Score=40.12 Aligned_cols=33 Identities=21% Similarity=0.440 Sum_probs=29.9
Q ss_pred CCEEEECC-CHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 7 SPVIIIGA-GVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGa-GiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..|+|+|| |-.|...+..|.++|+ +|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCh
Confidence 57999998 9999999999999999 799998753
No 464
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=87.65 E-value=0.54 Score=42.99 Aligned_cols=39 Identities=10% Similarity=0.109 Sum_probs=32.0
Q ss_pred CCCCCCCCEEEECC---CHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 1 MDSTSRSPVIIIGA---GVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 1 m~~~~~~dVvIIGa---GiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
|.....+.|+|.|| |-.|...|..|+++|. +|+++.++.
T Consensus 1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~ 42 (275)
T 2pd4_A 1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNE 42 (275)
T ss_dssp -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESST
T ss_pred CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 55445677999997 5889999999999999 799998764
No 465
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.63 E-value=0.47 Score=43.56 Aligned_cols=33 Identities=30% Similarity=0.454 Sum_probs=28.0
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCC-cEEEEeeC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIE-DILILEAS 39 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~-~V~vlEa~ 39 (496)
.+|.|||+|..|.+.|..|++.|+. +|++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 4699999999999999999999972 38888754
No 466
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=87.60 E-value=0.41 Score=43.37 Aligned_cols=33 Identities=24% Similarity=0.225 Sum_probs=29.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.+|.|||+|..|...|..|.+.|+ +|.+++++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~-~v~~~~~~ 35 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPH-ELIISGSS 35 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSC-EEEEECSS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCC-eEEEECCC
Confidence 4579999999999999999999998 79999864
No 467
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=87.57 E-value=0.72 Score=40.39 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=29.0
Q ss_pred CCCEEEECC-CHHHHHHHHHHH-HCCCCcEEEEeeC
Q 010995 6 RSPVIIIGA-GVSGISAGKILA-ENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGa-GiaGL~aA~~L~-~~G~~~V~vlEa~ 39 (496)
++.|+|+|| |-.|...|..|+ +.|+ +|+++.++
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQ 39 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESS
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecC
Confidence 445999995 999999999999 8999 79999875
No 468
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=87.49 E-value=0.52 Score=45.91 Aligned_cols=36 Identities=25% Similarity=0.531 Sum_probs=31.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
...+|+|||+|-.|..+|..|...|.++|++++++.
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 467899999999999999999999984599998763
No 469
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=87.47 E-value=0.53 Score=46.98 Aligned_cols=31 Identities=26% Similarity=0.496 Sum_probs=29.2
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 8 PVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+|.|||+|..|...|..|+++|+ +|++++++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~-~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 69999999999999999999999 69999875
No 470
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=87.43 E-value=0.33 Score=47.33 Aligned_cols=30 Identities=20% Similarity=0.437 Sum_probs=27.6
Q ss_pred CCEEEECCCHHHHHHHHHHHH-CCCCcEEEEe
Q 010995 7 SPVIIIGAGVSGISAGKILAE-NGIEDILILE 37 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~-~G~~~V~vlE 37 (496)
.+|+|||+|..|.+.|..|++ +|+ +|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~-~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGV-EVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTE-EEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCC-EEEEEe
Confidence 369999999999999999998 599 799998
No 471
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=87.25 E-value=0.32 Score=45.04 Aligned_cols=32 Identities=22% Similarity=0.281 Sum_probs=29.1
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
.+|.|||+|..|...|..|++.|+ +|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGH-QLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTC-EEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC-EEEEEc-CH
Confidence 479999999999999999999999 799998 53
No 472
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=87.21 E-value=0.59 Score=45.40 Aligned_cols=35 Identities=20% Similarity=0.506 Sum_probs=30.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC--CcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGI--EDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~--~~V~vlEa~ 39 (496)
+..+|+|.|||-||+.+|..|.+.|. ++|.++++.
T Consensus 218 ~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~ 254 (487)
T 3nv9_A 218 HECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSK 254 (487)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETT
T ss_pred hhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecc
Confidence 34689999999999999999999998 468888864
No 473
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=87.14 E-value=0.59 Score=44.24 Aligned_cols=35 Identities=17% Similarity=0.348 Sum_probs=30.1
Q ss_pred CCCCEEEECC-CHHHHHHHHHHHHCCC-CcEEEEeeC
Q 010995 5 SRSPVIIIGA-GVSGISAGKILAENGI-EDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGa-GiaGL~aA~~L~~~G~-~~V~vlEa~ 39 (496)
.+.+|+|||+ |-.|.++|+.|...|. .+|+++|..
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 4568999997 9999999999999985 269999864
No 474
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=87.11 E-value=0.42 Score=44.87 Aligned_cols=32 Identities=22% Similarity=0.455 Sum_probs=28.3
Q ss_pred CEEEECCCHHHHHHHHHHHHCCC-CcEEEEeeC
Q 010995 8 PVIIIGAGVSGISAGKILAENGI-EDILILEAS 39 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~-~~V~vlEa~ 39 (496)
+|+|||+|-.|.+.|..|+++|+ .+|++++.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 59999999999999999999987 139999875
No 475
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=87.07 E-value=0.56 Score=43.11 Aligned_cols=34 Identities=12% Similarity=0.390 Sum_probs=29.9
Q ss_pred CCCCCEEEECC-CHHHHHHHHHHHHCCCCcEEEEee
Q 010995 4 TSRSPVIIIGA-GVSGISAGKILAENGIEDILILEA 38 (496)
Q Consensus 4 ~~~~dVvIIGa-GiaGL~aA~~L~~~G~~~V~vlEa 38 (496)
...++|+|||+ |+.|..+|..|.+.|. .|+++.+
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~ 197 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHS 197 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeC
Confidence 35689999995 5799999999999999 6999976
No 476
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=87.06 E-value=0.6 Score=46.52 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=31.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
....|+|||+|..|..+|..|+..|. +|+++|.+
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~ 306 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEID 306 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46789999999999999999999999 79999874
No 477
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=87.05 E-value=0.6 Score=43.34 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=26.6
Q ss_pred CCCEEEECCC-HHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGAG-VSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGaG-iaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+++||||| .+++.+|..|.+.|. +|+++++.+
T Consensus 146 ~~~~~VIggG~~~~~e~a~~~~~~~~-~v~i~~~~~ 180 (304)
T 4fk1_A 146 DQPLIIISENEDHTLHMTKLVYNWST-DLVIATNGN 180 (304)
T ss_dssp TSCEEEECCSHHHHHHHHHHHTTTCS-CEEEECSSC
T ss_pred CCceeeecCCCchhhhHHHHHHhCCc-eEEEEeccc
Confidence 4567777777 567899999998898 699987643
No 478
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.01 E-value=0.69 Score=41.55 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=28.7
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCC---CcEEEEeeC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGI---EDILILEAS 39 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~---~~V~vlEa~ 39 (496)
.+|.|||+|..|.+.|..|.++|+ .+|++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 579999999999999999999997 148888764
No 479
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=86.72 E-value=0.62 Score=43.44 Aligned_cols=33 Identities=27% Similarity=0.600 Sum_probs=28.8
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 8 PVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
+|+|||||-.|.+.|+.|+..|+.+|.++|...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 589999999999999999998882399999753
No 480
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=86.71 E-value=0.47 Score=41.73 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=30.5
Q ss_pred CCCEEEECC-CHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 6 RSPVIIIGA-GVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 6 ~~dVvIIGa-GiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
+.+|+|+|| |..|...+..|.++|+ +|+++.++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCc
Confidence 578999995 9999999999999999 799998763
No 481
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=86.63 E-value=0.64 Score=42.42 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=30.1
Q ss_pred CCCCCEEEECCC-HHHHHHHHHHHHCCCCcEEEEee
Q 010995 4 TSRSPVIIIGAG-VSGISAGKILAENGIEDILILEA 38 (496)
Q Consensus 4 ~~~~dVvIIGaG-iaGL~aA~~L~~~G~~~V~vlEa 38 (496)
...++|+|||+| +.|-.+|..|.+.|. .|+++.+
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs 191 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHR 191 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCC-eEEEEeC
Confidence 357899999999 679999999999999 6999964
No 482
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.61 E-value=0.53 Score=44.21 Aligned_cols=36 Identities=28% Similarity=0.453 Sum_probs=30.8
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCC-CcEEEEeeC
Q 010995 4 TSRSPVIIIGAGVSGISAGKILAENGI-EDILILEAS 39 (496)
Q Consensus 4 ~~~~dVvIIGaGiaGL~aA~~L~~~G~-~~V~vlEa~ 39 (496)
....+|+|||+|-.|.+.|+.|+..|. .+++++|..
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 455789999999999999999999886 259999863
No 483
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=86.48 E-value=0.42 Score=44.11 Aligned_cols=33 Identities=24% Similarity=0.387 Sum_probs=29.3
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.+.|+|+|+|-.|.+.|+.|++.| + |+|+.++
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G-~-V~v~~r~ 159 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN-N-IIIANRT 159 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-E-EEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-C-EEEEECC
Confidence 4567999999999999999999999 5 9999764
No 484
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=86.31 E-value=0.81 Score=42.03 Aligned_cols=34 Identities=26% Similarity=0.291 Sum_probs=29.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCC--cEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIE--DILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~--~V~vlEa~ 39 (496)
+.+|.|||+|..|-+-|..|.++|+. +|++++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~ 38 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRS 38 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCC
Confidence 46799999999999999999999972 48888864
No 485
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=86.31 E-value=0.69 Score=44.98 Aligned_cols=34 Identities=18% Similarity=0.286 Sum_probs=31.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
..+.|+|||.|..|..+|..|...|. +|+++|.+
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~ 243 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVD 243 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 46789999999999999999999999 79999874
No 486
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=86.26 E-value=0.86 Score=43.06 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=31.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
...+|.|||.|-.|...|..|+..|. +|++++++.
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~ 183 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTR 183 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCc
Confidence 45679999999999999999999999 799998754
No 487
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=86.16 E-value=0.78 Score=42.28 Aligned_cols=34 Identities=15% Similarity=0.446 Sum_probs=30.3
Q ss_pred CCCCEEEEC-CCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIG-AGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIG-aGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.+.|+|+| +|-.|.+.|+.|++.|. +|+++.++
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECC
Confidence 456799999 99999999999999999 69999764
No 488
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=86.14 E-value=1.4 Score=44.13 Aligned_cols=43 Identities=9% Similarity=0.047 Sum_probs=36.0
Q ss_pred cccceeeCceeEEEEEcCCceEEEeCCCcEEEcCEEEEecChH
Q 010995 211 LDNRLKLNKVVRELQHSRNGVTVKTEDGCVYEANYVILSASIG 253 (496)
Q Consensus 211 ~g~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~A~p~~ 253 (496)
.|++|+++++|++|..+++...|.+.+|+++.+|.||+|++..
T Consensus 270 ~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 270 WGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp HTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEE
T ss_pred CCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcC
Confidence 6999999999999987654445778888899999999998753
No 489
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=86.12 E-value=0.73 Score=41.93 Aligned_cols=37 Identities=8% Similarity=0.232 Sum_probs=30.5
Q ss_pred CCCCCCEEEECC---CHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 3 STSRSPVIIIGA---GVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 3 ~~~~~dVvIIGa---GiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+.+.|+|.|| |-.|...|..|+++|. +|+++.++.
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~ 43 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDR 43 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSC
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecCh
Confidence 345567899995 7889999999999999 799987653
No 490
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=86.10 E-value=0.6 Score=43.37 Aligned_cols=33 Identities=18% Similarity=0.288 Sum_probs=30.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+++|.+||=|..|..-|..|.++|+ +|+|++++
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~ 35 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLV 35 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 5689999999999999999999999 79999875
No 491
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.10 E-value=0.63 Score=42.23 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=29.3
Q ss_pred CCCCEEEECC-C-HHHHHHHHHHHHCCCCcEEEEeeC
Q 010995 5 SRSPVIIIGA-G-VSGISAGKILAENGIEDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGa-G-iaGL~aA~~L~~~G~~~V~vlEa~ 39 (496)
+.+.|+|.|| | -.|...|..|+++|. +|+++.++
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~ 56 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYH 56 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCC
Confidence 4567999998 7 499999999999999 79999764
No 492
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=85.88 E-value=0.68 Score=43.56 Aligned_cols=35 Identities=9% Similarity=0.444 Sum_probs=30.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC-CcEEEEeeC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGI-EDILILEAS 39 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~-~~V~vlEa~ 39 (496)
...+|+|||+|-.|.+.|+.|+.+|. .+|+|+|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 45689999999999999999999986 259999864
No 493
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=85.74 E-value=0.85 Score=43.12 Aligned_cols=36 Identities=14% Similarity=0.235 Sum_probs=30.2
Q ss_pred CCCCEEEECC-CHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 5 SRSPVIIIGA-GVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 5 ~~~dVvIIGa-GiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
+++.|+|.|| |..|...+..|.++|+ +|+++.++..
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~ 54 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLRPS 54 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCC
Confidence 4578999998 9999999999999999 6999987653
No 494
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=85.61 E-value=0.55 Score=42.61 Aligned_cols=30 Identities=20% Similarity=0.266 Sum_probs=27.3
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCcEEEEee
Q 010995 8 PVIIIGAGVSGISAGKILAENGIEDILILEA 38 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa 38 (496)
+|.|||+|..|...|..|++.|+ +|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~-~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCC-eEEEeCC
Confidence 58999999999999999999999 7998754
No 495
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=85.61 E-value=0.79 Score=42.00 Aligned_cols=39 Identities=13% Similarity=0.216 Sum_probs=30.3
Q ss_pred CCCCCCCCEEEECC-CH--HHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 1 MDSTSRSPVIIIGA-GV--SGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 1 m~~~~~~dVvIIGa-Gi--aGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
|...+.+.|+|.|| |- .|...|..|+++|. +|+++.++.
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~ 62 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQ 62 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTT
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCch
Confidence 44444567888885 44 79999999999999 799998765
No 496
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=85.33 E-value=0.58 Score=43.30 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=28.5
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCC-cEEEEeeCC
Q 010995 8 PVIIIGAGVSGISAGKILAENGIE-DILILEASD 40 (496)
Q Consensus 8 dVvIIGaGiaGL~aA~~L~~~G~~-~V~vlEa~~ 40 (496)
+|+|||||..|.+.|+.|++.|.- +|++++..+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 599999999999999999999862 499998743
No 497
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=85.32 E-value=1.1 Score=42.28 Aligned_cols=36 Identities=25% Similarity=0.257 Sum_probs=32.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
..++|.|||.|-.|...|..|+..|. +|++++++..
T Consensus 163 ~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~dr~~~ 198 (333)
T 3ba1_A 163 SGKRVGIIGLGRIGLAVAERAEAFDC-PISYFSRSKK 198 (333)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTC-CEEEECSSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCch
Confidence 45689999999999999999999999 6999998653
No 498
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=85.12 E-value=0.94 Score=46.28 Aligned_cols=34 Identities=21% Similarity=0.477 Sum_probs=31.9
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCCC
Q 010995 7 SPVIIIGAGVSGISAGKILAENGIEDILILEASDR 41 (496)
Q Consensus 7 ~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~~ 41 (496)
.+|+|||+|-.|...|..|.+.|+ +|+++|.++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV-PFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-CEEEEECChH
Confidence 789999999999999999999999 7999999764
No 499
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=85.11 E-value=0.75 Score=42.36 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=28.4
Q ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCCcEEEEeeC
Q 010995 6 RSPVIIIGAGVSGISAGKILAEN--GIEDILILEAS 39 (496)
Q Consensus 6 ~~dVvIIGaGiaGL~aA~~L~~~--G~~~V~vlEa~ 39 (496)
+.+|.|||+|..|.+.|..|+++ |+ +|++++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~-~V~~~d~~ 40 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHY-KIVGYNRS 40 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTS-EEEEECSS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCc-EEEEEcCC
Confidence 45799999999999999999998 57 68888763
No 500
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=85.06 E-value=1.1 Score=43.34 Aligned_cols=35 Identities=26% Similarity=0.355 Sum_probs=31.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCcEEEEeeCC
Q 010995 5 SRSPVIIIGAGVSGISAGKILAENGIEDILILEASD 40 (496)
Q Consensus 5 ~~~dVvIIGaGiaGL~aA~~L~~~G~~~V~vlEa~~ 40 (496)
..+.|.|||+|..|...|..+.+.|+ +|.+++...
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~-~vi~~d~~~ 47 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGY-KIAVLDPTK 47 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCC
Confidence 45689999999999999999999999 799998754
Done!