Query 011000
Match_columns 496
No_of_seqs 233 out of 1409
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 18:43:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011000.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011000hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vat_A Dnpep, aspartyl aminope 100.0 3E-110 9E-115 889.9 35.2 436 55-495 33-496 (496)
2 4eme_A M18 aspartyl aminopepti 100.0 2E-107 7E-112 874.7 32.4 437 55-495 4-570 (571)
3 2glf_A Probable M18-family ami 100.0 1E-102 4E-107 827.3 32.9 416 39-485 3-450 (450)
4 2glj_A Probable M18-family ami 100.0 8E-100 3E-104 809.4 18.2 425 36-483 1-460 (461)
5 1y7e_A Probable M18-family ami 100.0 5.9E-97 2E-101 786.6 20.8 420 39-483 2-457 (458)
6 2ijz_A Probable M18-family ami 100.0 5.9E-99 2E-103 796.3 -0.1 396 60-484 4-424 (428)
7 2vpu_A TET3, 354AA long hypoth 100.0 2.1E-59 7.1E-64 484.6 22.8 298 104-488 44-350 (354)
8 3isx_A Endoglucanase; TM1050, 100.0 1.8E-58 6.2E-63 475.3 21.0 294 101-483 41-342 (343)
9 3kl9_A PEPA, glutamyl aminopep 100.0 6.8E-57 2.3E-61 466.0 23.4 301 104-487 37-346 (355)
10 1vho_A Endoglucanase; structur 100.0 9.4E-41 3.2E-45 342.3 24.4 317 58-487 8-336 (346)
11 1y0y_A FRV operon protein FRVX 100.0 2E-40 6.9E-45 341.4 25.0 327 60-487 11-350 (353)
12 1ylo_A Hypothetical protein SF 100.0 1.7E-40 5.7E-45 340.2 23.9 309 76-487 24-338 (348)
13 1vhe_A Aminopeptidase/glucanas 100.0 1.7E-39 5.9E-44 337.2 25.9 332 63-487 12-354 (373)
14 2gre_A Deblocking aminopeptida 100.0 1.3E-39 4.6E-44 335.0 22.6 322 60-484 8-344 (349)
15 2fvg_A Endoglucanase; TM1049, 100.0 3.6E-38 1.2E-42 323.1 18.1 310 76-487 19-335 (340)
16 2wyr_A Cobalt-activated peptid 100.0 1.4E-36 4.6E-41 310.0 24.6 303 74-485 21-332 (332)
17 3cpx_A Aminopeptidase, M42 fam 100.0 1E-36 3.6E-41 310.6 17.9 278 76-485 38-321 (321)
18 2wzn_A TET3, 354AA long hypoth 99.9 8.8E-24 3E-28 208.7 23.3 329 59-491 13-353 (354)
19 4h2k_A Succinyl-diaminopimelat 99.6 6.4E-15 2.2E-19 145.8 10.5 172 272-487 94-268 (269)
20 3t68_A Succinyl-diaminopimelat 99.4 1.4E-13 4.8E-18 135.9 9.1 170 272-485 94-266 (268)
21 1rtq_A Bacterial leucyl aminop 99.1 7.7E-11 2.6E-15 118.2 8.7 167 273-487 110-288 (299)
22 1tkj_A Aminopeptidase, SGAP; d 99.1 2.1E-10 7.2E-15 114.3 9.2 159 278-487 95-277 (284)
23 1fno_A Peptidase T; metallo pe 98.9 3.7E-09 1.3E-13 110.2 9.2 80 403-488 328-407 (417)
24 3ife_A Peptidase T; metallopep 98.8 2.7E-07 9.4E-12 96.7 21.7 79 403-487 354-432 (434)
25 2ek8_A Aminopeptidase; metallo 98.7 1.3E-07 4.5E-12 99.1 13.7 160 277-487 237-401 (421)
26 3gb0_A Peptidase T; NP_980509. 98.6 1E-07 3.4E-12 97.6 11.2 77 403-485 295-371 (373)
27 3rza_A Tripeptidase; phosphory 98.6 8E-08 2.7E-12 99.4 10.2 78 404-487 316-393 (396)
28 1cg2_A Carboxypeptidase G2; me 98.1 2.2E-06 7.7E-11 88.3 6.8 78 405-487 312-391 (393)
29 3tx8_A Succinyl-diaminopimelat 98.0 2.7E-05 9.1E-10 79.3 11.8 50 433-483 318-368 (369)
30 3pfo_A Putative acetylornithin 97.9 3E-05 1E-09 80.7 10.9 80 404-488 350-430 (433)
31 3iib_A Peptidase M28; YP_92679 97.8 2E-05 6.7E-10 83.3 6.9 162 277-489 266-434 (444)
32 3mru_A Aminoacyl-histidine dip 97.7 0.00041 1.4E-08 73.9 14.7 81 402-487 406-488 (490)
33 3isz_A Succinyl-diaminopimelat 97.6 0.00013 4.4E-09 74.0 8.8 94 387-486 279-375 (377)
34 1q7l_B Aminoacylase-1; catalys 97.5 0.00037 1.3E-08 56.7 9.0 76 407-488 3-81 (88)
35 3tc8_A Leucine aminopeptidase; 97.4 0.0003 1E-08 70.8 8.8 154 276-482 123-306 (309)
36 2qyv_A XAA-His dipeptidase; YP 97.4 0.001 3.4E-08 70.6 12.4 78 404-486 406-485 (487)
37 3n5f_A L-carbamoylase, N-carba 96.6 0.0026 9E-08 65.6 7.0 78 402-486 327-406 (408)
38 4fuu_A Leucine aminopeptidase; 96.5 0.014 4.9E-07 58.2 11.1 165 277-475 124-295 (309)
39 1z2l_A Allantoate amidohydrola 96.4 0.0085 2.9E-07 61.9 9.5 79 402-487 331-411 (423)
40 3gux_A Putative Zn-dependent e 96.4 0.0061 2.1E-07 61.4 7.7 154 276-479 125-304 (314)
41 4fai_A CG5976, isoform B; alph 96.3 0.017 5.9E-07 58.3 10.5 48 277-324 126-173 (330)
42 1q7l_A Aminoacylase-1; catalys 95.9 0.0064 2.2E-07 56.6 4.7 55 271-328 103-159 (198)
43 4f9u_A CG32412; alpha/beta hyd 95.4 0.053 1.8E-06 54.0 9.6 187 276-485 99-297 (312)
44 3pb6_X Glutaminyl-peptide cycl 95.2 0.028 9.6E-07 57.0 7.0 172 277-485 131-327 (330)
45 1vgy_A Succinyl-diaminopimelat 95.1 0.016 5.5E-07 59.3 4.8 79 404-488 301-380 (393)
46 2afw_A Glutaminyl-peptide cycl 94.9 0.033 1.1E-06 56.1 6.5 43 277-319 124-171 (329)
47 2v8h_A Beta-alanine synthase; 94.8 0.057 2E-06 56.9 8.2 79 402-487 365-447 (474)
48 3fed_A Glutamate carboxypeptid 94.5 0.015 5E-07 64.9 2.8 51 277-328 341-392 (707)
49 3kas_A Transferrin receptor pr 92.7 0.024 8.3E-07 62.4 0.5 148 276-469 294-456 (640)
50 2pok_A Peptidase, M20/M25/M40 92.2 0.11 3.9E-06 54.5 5.0 78 403-485 399-480 (481)
51 3ct9_A Acetylornithine deacety 92.2 0.16 5.4E-06 51.2 5.8 49 433-485 305-354 (356)
52 2f7v_A Aectylcitrulline deacet 92.1 0.13 4.4E-06 52.0 5.1 77 401-484 288-367 (369)
53 2zog_A Cytosolic non-specific 91.4 0.15 5E-06 53.4 4.7 79 404-487 394-476 (479)
54 1q7l_A Aminoacylase-1; catalys 91.1 0.5 1.7E-05 43.5 7.5 56 74-143 31-86 (198)
55 3n5f_A L-carbamoylase, N-carba 90.8 0.57 1.9E-05 47.9 8.4 52 74-143 34-85 (408)
56 4fuu_A Leucine aminopeptidase; 90.6 0.68 2.3E-05 45.9 8.5 75 59-142 29-107 (309)
57 2pok_A Peptidase, M20/M25/M40 90.5 0.2 6.7E-06 52.6 4.6 52 271-325 137-189 (481)
58 2rb7_A Peptidase, M20/M25/M40 90.1 0.096 3.3E-06 53.0 1.8 73 404-487 287-360 (364)
59 3pfe_A Succinyl-diaminopimelat 89.9 0.5 1.7E-05 49.5 7.2 79 404-487 387-470 (472)
60 3tc8_A Leucine aminopeptidase; 89.1 0.58 2E-05 46.6 6.6 77 58-143 28-108 (309)
61 3khx_A Putative dipeptidase sa 88.8 0.18 6.3E-06 53.3 2.8 76 404-487 412-490 (492)
62 1tkj_A Aminopeptidase, SGAP; d 88.3 0.6 2E-05 45.6 6.0 57 75-143 35-91 (284)
63 2zog_A Cytosolic non-specific 88.1 0.54 1.8E-05 49.1 5.8 60 75-142 46-108 (479)
64 4f9u_A CG32412; alpha/beta hyd 87.4 0.35 1.2E-05 47.9 3.7 62 73-143 28-92 (312)
65 3rza_A Tripeptidase; phosphory 87.3 0.93 3.2E-05 46.1 6.9 92 59-160 25-121 (396)
66 1ysj_A Protein YXEP; M20 famil 87.1 0.46 1.6E-05 48.6 4.5 77 403-487 320-401 (404)
67 3gb0_A Peptidase T; NP_980509. 86.6 1.2 4.1E-05 44.7 7.2 61 71-141 22-82 (373)
68 3khx_A Putative dipeptidase sa 86.5 0.72 2.5E-05 48.7 5.7 52 271-325 128-180 (492)
69 1z2l_A Allantoate amidohydrola 86.4 1.5 5.3E-05 44.7 8.0 52 74-143 38-89 (423)
70 3gux_A Putative Zn-dependent e 85.9 1 3.5E-05 45.0 6.2 61 74-143 49-110 (314)
71 1lfw_A PEPV; hydrolase, dipept 85.8 0.45 1.5E-05 49.5 3.6 74 404-487 388-466 (470)
72 1lfw_A PEPV; hydrolase, dipept 85.4 0.74 2.5E-05 47.8 5.1 47 75-142 46-92 (470)
73 1xmb_A IAA-amino acid hydrolas 84.7 1 3.6E-05 46.2 5.8 79 403-487 316-403 (418)
74 3dlj_A Beta-Ala-His dipeptidas 84.2 0.81 2.8E-05 48.1 4.7 78 406-488 403-484 (485)
75 3dlj_A Beta-Ala-His dipeptidas 84.2 1.2 4.1E-05 46.8 6.0 59 75-143 53-116 (485)
76 3tx8_A Succinyl-diaminopimelat 84.0 1.8 6E-05 43.4 7.0 65 60-142 18-82 (369)
77 3mru_A Aminoacyl-histidine dip 83.2 2.3 7.9E-05 44.8 7.8 56 73-144 32-87 (490)
78 3pb6_X Glutaminyl-peptide cycl 82.3 1.5 5E-05 44.3 5.5 59 75-143 61-122 (330)
79 3ram_A HMRA protein; two-domai 82.0 4 0.00014 41.5 8.8 76 403-485 286-372 (394)
80 3pfe_A Succinyl-diaminopimelat 82.0 0.96 3.3E-05 47.3 4.2 50 272-325 121-171 (472)
81 3t68_A Succinyl-diaminopimelat 81.2 1.2 4.1E-05 42.9 4.3 66 59-142 10-75 (268)
82 1fno_A Peptidase T; metallo pe 81.0 2.5 8.5E-05 43.1 6.9 49 272-325 127-180 (417)
83 3isz_A Succinyl-diaminopimelat 80.9 1.2 4E-05 44.5 4.3 52 271-325 90-143 (377)
84 4fai_A CG5976, isoform B; alph 80.4 1.2 4E-05 44.8 4.0 61 73-142 55-118 (330)
85 1vgy_A Succinyl-diaminopimelat 80.2 1.3 4.3E-05 45.0 4.2 52 271-325 93-146 (393)
86 2qyv_A XAA-His dipeptidase; YP 79.9 4.1 0.00014 42.6 8.2 57 71-143 27-83 (487)
87 1rtq_A Bacterial leucyl aminop 79.4 1.5 5E-05 43.1 4.3 59 75-142 43-102 (299)
88 3ram_A HMRA protein; two-domai 78.7 2.1 7.3E-05 43.6 5.4 57 70-142 31-87 (394)
89 4h2k_A Succinyl-diaminopimelat 77.6 1.9 6.5E-05 41.5 4.4 55 70-142 21-75 (269)
90 2rb7_A Peptidase, M20/M25/M40 76.9 0.87 3E-05 45.9 1.8 52 271-325 90-148 (364)
91 2f7v_A Aectylcitrulline deacet 75.7 1.8 6E-05 43.5 3.7 39 277-325 103-142 (369)
92 3ct9_A Acetylornithine deacety 73.3 2.6 8.9E-05 42.2 4.3 50 73-141 29-78 (356)
93 1xmb_A IAA-amino acid hydrolas 73.3 8.2 0.00028 39.4 8.1 50 73-141 46-95 (418)
94 2v8h_A Beta-alanine synthase; 72.9 6.4 0.00022 41.1 7.3 50 74-142 69-118 (474)
95 1cg2_A Carboxypeptidase G2; me 72.9 15 0.00051 36.9 9.9 50 273-325 111-161 (393)
96 3pfo_A Putative acetylornithin 70.8 7.8 0.00027 39.5 7.3 66 73-142 44-116 (433)
97 1ysj_A Protein YXEP; M20 famil 68.7 8.4 0.00029 39.1 6.9 52 73-141 50-101 (404)
98 2afw_A Glutaminyl-peptide cycl 66.5 5.5 0.00019 39.6 4.9 49 435-485 273-326 (329)
99 3k9t_A Putative peptidase; str 64.9 20 0.00068 37.3 8.8 155 277-485 193-353 (435)
100 3io1_A Aminobenzoyl-glutamate 61.5 7.1 0.00024 40.3 4.8 84 402-487 343-433 (445)
101 3io1_A Aminobenzoyl-glutamate 60.7 21 0.00073 36.7 8.3 31 62-92 21-51 (445)
102 2ek8_A Aminopeptidase; metallo 36.8 31 0.0011 35.2 4.9 31 113-143 203-234 (421)
103 3iib_A Peptidase M28; YP_92679 32.9 27 0.00093 36.1 3.6 30 112-143 234-263 (444)
104 3kas_A Transferrin receptor pr 21.5 49 0.0017 36.2 3.2 29 112-142 265-293 (640)
No 1
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=100.00 E-value=2.7e-110 Score=889.87 Aligned_cols=436 Identities=48% Similarity=0.818 Sum_probs=389.6
Q ss_pred cchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEE
Q 011000 55 SSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHII 134 (496)
Q Consensus 55 ~~~~~~a~~~~~Fl~~s~T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi 134 (496)
..+.+++++|++||++||||||||++++++|+++||++|.|++.|+++||++||++|++++||||.+|+++.+++|++||
T Consensus 33 ~~~~~~a~~~~~Fl~~spT~~hav~~~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~~iv 112 (496)
T 3vat_A 33 EAVQAAARELLKFVNRSPSPFHAVAECRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLI 112 (496)
T ss_dssp HHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCeEEE
Confidence 34577999999999999999999999999999999999999999999999999999999999999999988778999999
Q ss_pred EEeccCCceeeeeCCCCCCC--------------------------cEEEEEc-CCCcEEEEEEEcCCCeEEcCCCCccc
Q 011000 135 AAHTDSPCLKLKPKSASSKS--------------------------GRVIVRG-SDGSFLHKLVKVKRPLLRVPTLAIHL 187 (496)
Q Consensus 135 ~AH~Dspgl~VKpi~~~~~~--------------------------G~V~~~~-~~G~~~~~lv~~~~pv~vIp~laiHL 187 (496)
|||+|||||+|||+++.+.. |||++++ .+|+++++||+.++||++||+|||||
T Consensus 113 gaHtDSP~lklKp~p~~~~~g~~~l~ve~YGG~l~~tW~DR~L~laGrV~vk~~~~g~~~~~Lv~~~~Pi~~IP~LaiHl 192 (496)
T 3vat_A 113 GAHTDSPCLRVKRRSRRSQVGFQQVGVETYGGGIWSTWFDRDLTLAGRVIVKCPTSGRLEQRLVHVDRPILRIPHLAIHL 192 (496)
T ss_dssp EEECCCCEEEEEEEEEEEETTEEEEEEEEESSCCGGGGTTCCEEEEEEEEEECTTTCCEEEEEEECCSCCBBCCCCCGGG
T ss_pred EEeccCCCccccCCccccCCCeeEEccEeCCCchhceecCCchhcceEEEEEecCCCeEEEEEEeCCCCeEECCcccccc
Confidence 99999999999999986433 9999984 46789999999999999999999999
Q ss_pred ccccccCCCCCCCccceeeeeeccCCcccCC-ccccCCCCCCccCChhHHHHHHHHHcCCCCCceeEEeeeeeecCCccc
Q 011000 188 DRTVNKDGFKPNLETQLIPLLATKSEETSVE-PKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCL 266 (496)
Q Consensus 188 ~~~~~~~~~~~n~~~~L~~diG~~~~~~~~~-~~~~~~~~~~~~~h~~~ll~~~a~~~gV~~gDiv~~dl~~~d~~~~~~ 266 (496)
+|++| +++++|+|++|.|++|....++.++ ..+++..+..+++|+..|++++++++||++||+++|||+++|+||+++
T Consensus 193 ~r~~n-~~~~~n~q~~l~pi~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~la~~~gv~~~Div~~dl~l~d~~~~~~ 271 (496)
T 3vat_A 193 QRNVN-ENFGPNMEMHLVPILATSIQEELEKGTPEPGPLNATDERHHSVLTSLLCAHLGLSPEDILEMELCLADTQPAVL 271 (496)
T ss_dssp STTTT-TCCCCCTTTTTCCEEEEHHHHHHHCC-----------CCSCHHHHHHHHHHHTCCGGGEEEEEEEEEECSCCEE
T ss_pred Ccchh-cccCcCcccccccEEEeccccccccccccccccccccccccHHHHHHHHHHcCCCcCceEEEEEEEEecCcceE
Confidence 99988 7899999999999999753211000 000001112256889999999999999999999999999999999999
Q ss_pred cCCCCCeeeccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCC
Q 011000 267 GGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHE 346 (496)
Q Consensus 267 ~Gl~~e~I~s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~ 346 (496)
+|++++||.|+|||||+|||++++||+++.+.+..+.....+.++++||||||||+|++||+|.|+||+|+||+.+.+
T Consensus 272 ~Gl~~e~I~s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~~~v~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~~~-- 349 (496)
T 3vat_A 272 GGAYEEFIFAPRLDNLHSCFCALQALIDSCSAPASLAADPHVRMIALYDNEEVGSESAQGAQSLLTELVLRRISASPQ-- 349 (496)
T ss_dssp ETTTTCEEEETTHHHHHHHHHHHHHHHHHTTSHHHHHHCCSEEEEEEESCGGGTSCSSSSTTSTHHHHHHHHHHCCSS--
T ss_pred eccCCceEEeeccccHHHHHHHHHHHHhhhccccccccCCCcEEEEEEccCCcCCCcchhccccccHHHHHHHHhccC--
Confidence 999999999999999999999999999875310000001346779999999999999999999999999999997632
Q ss_pred CCChhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEE
Q 011000 347 HVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFV 426 (496)
Q Consensus 347 ~~~~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~ 426 (496)
+.+.+++++++|++||+||+||.||||+++|+++|.+.||+||+||++++|+|+||+.+.++++++|+++|||||.++
T Consensus 350 --~~~~~~~~l~~S~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v 427 (496)
T 3vat_A 350 --HLTAFEEAIPKSYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQDLM 427 (496)
T ss_dssp --CTTHHHHHGGGCEEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCEEEC
T ss_pred --chHHHHHHhhcCeEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEEEEE
Confidence 678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHhhccccccccccc
Q 011000 427 VRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVD 495 (496)
Q Consensus 427 ~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~~~~~~~~~~~~ 495 (496)
.|+|++||||+|+|++++.||||+|||+|+|||||||||++++|++++++|+++||+++.+++.++.+|
T Consensus 428 ~r~D~~gGgTig~i~~s~~Gi~tvdIGiP~ryMHS~~E~~~~~D~~~~v~Ll~af~~~~~~~~~~~~~~ 496 (496)
T 3vat_A 428 VRNDSPCGTTIGPILASRLGLRVLDLGSPQLAMHSIRETACTTGVLQTITLFKGFFELFPSLSRSLLVD 496 (496)
T ss_dssp CCTTSCCCCCHHHHHHHHHTCEEEEEECEEESTTSSSEEEESHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred ecCCCCCcchHHHHHhcccCCcEEEecHhhhccccHHHHhhHHHHHHHHHHHHHHHHhHHHHhhhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999887765
No 2
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2e-107 Score=874.73 Aligned_cols=437 Identities=30% Similarity=0.531 Sum_probs=380.2
Q ss_pred cchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCC-eeE
Q 011000 55 SSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNG-FHI 133 (496)
Q Consensus 55 ~~~~~~a~~~~~Fl~~s~T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g-~~m 133 (496)
+...+++++|++||++||||||||++++++|+++||++|.|++.|.++||++||++|+|++||||.+|++|.+++| ++|
T Consensus 4 ~~~~~~a~~~~~Fl~~spT~~HaV~~~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~I 83 (571)
T 4eme_A 4 KKAREYAQDALKFIQRSGSNFLACKNLKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILI 83 (571)
T ss_dssp HHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEE
T ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEE
Confidence 3457799999999999999999999999999999999999999999999999999999999999999999877888 999
Q ss_pred EEEeccCCceeeeeCCCCCCC--------------------------cEEEEEcCCCcEEEEEEEcCCCeEEcCCCCccc
Q 011000 134 IAAHTDSPCLKLKPKSASSKS--------------------------GRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHL 187 (496)
Q Consensus 134 i~AH~Dspgl~VKpi~~~~~~--------------------------G~V~~~~~~G~~~~~lv~~~~pv~vIp~laiHL 187 (496)
||||+|||||+|||+++.... |||+++. +|+++++||+.++||++||+|||||
T Consensus 84 vgAHtDSP~lklKP~p~~~~~g~~~l~ve~YGG~l~~tW~DRdLslaGrV~vk~-~g~~~~~LV~~~~Pi~~IP~LAiHL 162 (571)
T 4eme_A 84 SIGHIDSCALKISPNNNVIKKKIHQINVECYGSGLWHTWFDRSLGLSGQVLYKK-GNKLVEKLIQINKSVLFLPSLAIHL 162 (571)
T ss_dssp EEEECCCCEEEEEEEEEEEETTEEEEEEEEESSCCGGGGTTCCEEEEEEEEEEE-TTEEEEEEEEEEEEEEBCCCCCGGG
T ss_pred EEEeccCCcccccCCccccCCCeeEEeeEecCCchhccccCCcceeeeEEEEec-CCcEEEEEecCCCCeEEcCcccccc
Confidence 999999999999999986433 9999884 5789999999999999999999999
Q ss_pred ccccccCCCCC----CCccceeeeeeccCCccc------------------C-----------Ccc--c-----------
Q 011000 188 DRTVNKDGFKP----NLETQLIPLLATKSEETS------------------V-----------EPK--E----------- 221 (496)
Q Consensus 188 ~~~~~~~~~~~----n~~~~L~~diG~~~~~~~------------------~-----------~~~--~----------- 221 (496)
+|. +++++ |+|++|.|++|....+.. . +.. +
T Consensus 163 ~r~---~~~~~~~~~N~q~~l~Pi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (571)
T 4eme_A 163 QNR---TRYDFSVKINYENHIKPIISTTLFNQLNKCKRNNVHHDTILTTDTKFSHKENSQNKRDDQMCHSFNDKDVSNHN 239 (571)
T ss_dssp SCC-------CCCCCCTTTTCCCEEEEHHHHHHHHHC-------------------------------------------
T ss_pred Ccc---cccccccccccccccceeEeecchhhcccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 983 34667 999999999987321000 0 000 0
Q ss_pred ---------cCCCCCCccCCh------------------hHHHHHHHHHcCCCCCceeEEeeeeeecCCccccCCCCCee
Q 011000 222 ---------KSSTSSSKVTHH------------------PQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFI 274 (496)
Q Consensus 222 ---------~~~~~~~~~~h~------------------~~ll~~~a~~~gV~~gDiv~~dl~~~d~~~~~~~Gl~~e~I 274 (496)
.++....+++|+ ..||+++++++||+++||++|||++||+||++++|+++|||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~ll~lla~~~gi~~edIl~~EL~l~d~q~a~~~Gl~~efI 319 (571)
T 4eme_A 240 LDKNTIEHLTNQQNEEKNKHTKDNPNSKDIVEHINTDNSYPLLYLLSKELNCKEEDILDFELCLMDTQEPCFTGVYEEFI 319 (571)
T ss_dssp ---------------------------------CCTTSCHHHHHHHHHHHTSCGGGEEEEEEEEEECSCCEEESTTSCEE
T ss_pred ccccccccccccccchhcccccccccccccccccccccHHHHHHHHHHHhCCCHHHeeeceEEEecCCCcceecCCccee
Confidence 001122345677 88999999999999999999999999999999999999999
Q ss_pred eccCCCchhhHHHHHHHHHHcCCCC------------CCCCCCC------ceEEEEEEeccccCcccccccCCCcHHHHH
Q 011000 275 FSGRLDNLASSYCGLRALIDSCVSP------------SNLSSEH------AIRMVALFDNEEVGSDSYQGAGAPTMFQAI 336 (496)
Q Consensus 275 ~s~~LDNr~~~~~~leal~~~~~~~------------~~l~~~~------~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l 336 (496)
+|+|||||+|||++|+||+++.... ..+++.. .+.++++||||||||.|+|||.|+|++++|
T Consensus 320 ~s~RlDnl~~~~~al~All~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~lfD~EEIGS~s~qGA~S~fl~~~l 399 (571)
T 4eme_A 320 EGARFDNLLGSFCVFEGFIELVNSIKNHTSNENTNHTNNITNDINDNIHNNLYISIGYDHEEIGSLSEVGARSYCTKNFI 399 (571)
T ss_dssp EETTHHHHHHHHHHHHHHHHHHHHHTTC----------------CCCGGGCEEEEEEESCGGGTSCSTTSTTSTHHHHHH
T ss_pred eccCcccHHHHHHHHHHHHhccccccccccccccccccccccccccccccceeEEEEecccccCCCCCCCcCChHHHHHH
Confidence 9999999999999999999863200 0011112 578999999999999999999999999999
Q ss_pred HHHHhhccCC------CCChhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHH
Q 011000 337 RRIVGSLAHE------HVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFL 410 (496)
Q Consensus 337 ~ri~~~~~~~------~~~~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~ 410 (496)
+||+.+++.. ..+.+.+++++++||+||+||+||.||||++++++.|.+.||+||+||++++++|+||+.+.++
T Consensus 400 ~RI~~~~g~~~~~~~~~~~~~~~~~~la~S~~ISaDvahA~dPny~~~~d~~~~~~LG~GpvIk~~~~~~y~tn~~~~~~ 479 (571)
T 4eme_A 400 DRIISSVFKKEIHEKNLSVQEIYGNLVNRSFILNVDMAHCSHPNYPETVQDNHQLFFHEGIAIKYNTNKNYVTSPLHASL 479 (571)
T ss_dssp HHHHHHHTHHHHHTSCCCHHHHHHHHHTTCEEEEECCEECCCTTCGGGSCTTSCCCTTSCEEEECCTTSSSCCCHHHHHH
T ss_pred HHHHHhhCcccccccccccHHHHHHHHHhCeEEEEECCCCcCCCCcccccccCCcccCcCceEEEeCCCCcccCHHHHHH
Confidence 9999988641 0136789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHC------CCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHhh
Q 011000 411 FKEIAKLH------NLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYES 484 (496)
Q Consensus 411 l~~ia~~~------~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~ 484 (496)
|+++|+++ |||||.++.|||++||||+|+|++++.||||+|||+|+|||||||||+++.|++++++|+++||++
T Consensus 480 l~~iA~~~~~~~~~gIP~Q~~v~rnD~~gGgTig~i~~s~~GIpTvdIGiP~ryMHS~~E~~~~~Dv~~~vkLl~aFl~~ 559 (571)
T 4eme_A 480 IKRTFELYYNKYKQQIKYQNFMVKNDTPCGSTVGSMVAANLSMPGIDIGIPQLAMHSIREIAAVHDVFFLIKGVFAFYTY 559 (571)
T ss_dssp HHHHHHHHHHHHCCCCCEEEECCCSSSCCCCCSHHHHHHHHTCCEEEEECEEESTTSSSEEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccccCCCCCEEEEEEcCCCCCcchHHHHHHhCCCCcEEEechhhhccchHHHHhhHHHHHHHHHHHHHHHHh
Confidence 99999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccc
Q 011000 485 FSSIDKKLIVD 495 (496)
Q Consensus 485 ~~~~~~~~~~~ 495 (496)
|.+++.++++|
T Consensus 560 ~~~~~~~~~~~ 570 (571)
T 4eme_A 560 YNQVLSTCVHD 570 (571)
T ss_dssp HHHHHHTEECC
T ss_pred HHHHHhhhcCC
Confidence 99999988876
No 3
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=100.00 E-value=1.3e-102 Score=827.30 Aligned_cols=416 Identities=22% Similarity=0.329 Sum_probs=367.3
Q ss_pred ccCCCCCccccccccccchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEE
Q 011000 39 RPRTLHNFSTSGIAQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVA 118 (496)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~Fl~~s~T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA 118 (496)
+++++|+. .+..++.+++++|++||++||||||||++++++|+++||++|+|.+. ++||++||++|+|+||||
T Consensus 3 ~~~~~w~~-----~~~~~~~~~~~~~~~Fl~~s~t~~h~v~~~~~~l~~~Gf~~l~e~~~--l~~g~k~~~~r~~~~lia 75 (450)
T 2glf_A 3 ERKNVWHH-----RKKEEIEAFSKEYMEFMSKAKTERMTVKEIKRILDESGFVPLEDFAG--DPMNMTVYAVNRGKAIAA 75 (450)
T ss_dssp CCCCGGGT-----SCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHTTTCEETTSCCS--CTTSBCEEEESSSSCEEE
T ss_pred CccccCcH-----HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcCEEcccccC--CCCCCEEEEEcCCCEEEE
Confidence 57899993 33345577999999999999999999999999999999999999987 899999999999889999
Q ss_pred EEeCCcccCCCCeeEEEEeccCCceeeeeCCCCCCCcEEEE--EcCCC----------------------cEEEEEE--E
Q 011000 119 FAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGRVIV--RGSDG----------------------SFLHKLV--K 172 (496)
Q Consensus 119 ~~~G~~~~~~~g~~mi~AH~Dspgl~VKpi~~~~~~G~V~~--~~~~G----------------------~~~~~lv--~ 172 (496)
|++|+. +++|++||+||||||||+|||+|.++++|++.+ ...|| ....++| +
T Consensus 76 ~~~g~~--~~~g~~ii~AH~Dsp~l~Vk~~~~i~~~G~~~l~v~~yGG~~~~~w~dr~L~laGrV~v~~g~~~~~~ig~~ 153 (450)
T 2glf_A 76 FRVVDD--LKRGLNLVVAHIDSPRLDFKPNPLIEDEQIALFKTHYYGGIKKYHWLSIPLEIHGVLFKNDGTEIEIHIGDK 153 (450)
T ss_dssp EEBCSC--GGGCCEEEEEECCCCEEEEEEEEEEEETTEEEEEEEEESSCCSGGGSSSCEEEEEEEECTTSCEEEEEESSS
T ss_pred EEeCCC--CCCCeEEEEEecccCCeEEecCCeecCCCEEEEEeEeeCCcchhhccCcccceeeEEEEeCCCeeEeeeccc
Confidence 999963 235799999999999999999888777777763 33344 1111222 2
Q ss_pred cCCCeEEcCCCCcccccccccCCCCCCCccceeeeeeccCCcccCCccccCCCCCCccCChhHHHHHHHHHcCCCCCcee
Q 011000 173 VKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIA 252 (496)
Q Consensus 173 ~~~pv~vIp~laiHL~~~~~~~~~~~n~~~~L~~diG~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~~a~~~gV~~gDiv 252 (496)
.++|+++||+|||||+++.+ +.++++++++|+||+|+.+.+. ++ +++|+..|++++++++||++||++
T Consensus 154 ~~~pi~~Ip~laiHl~~~~~-~~~~~~~~~~l~~~iG~~~~~~------~~-----~~~~~~~ll~~la~~~gv~~~div 221 (450)
T 2glf_A 154 PEDPVFTIPDLLPHLDKEDA-KISEKFKGENLMLIAGTIPLSG------EE-----KEAVKTNVLKILNEMYGITEEDFV 221 (450)
T ss_dssp SSSCBBCCCCCCGGGCCCCC-BTTTTSCGGGCEEEEECCCCTT------CC-----SSHHHHHHHHHHHHHHCCCGGGGT
T ss_pred CCCceEEeccCccccccccc-ccccCCchhcceEEEecCCCcc------cc-----hhhhHHHHHHHHHHHcCCCcccEE
Confidence 35699999999999998754 5578999999999999865210 00 145788899999999999999999
Q ss_pred EEeeeeeecCCccccCCCCCeeeccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcH
Q 011000 253 SIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTM 332 (496)
Q Consensus 253 ~~dl~~~d~~~~~~~Gl~~e~I~s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~ 332 (496)
+||++++|+||++.+|++++||.|+|||||+|||++++||+++ + .+.+.++++||||||||+|++||+|.|+
T Consensus 222 ~~dl~~~~~~~~~~~Gl~~~~i~~~~lDnr~~~~~~l~al~~~-~-------~~~~~~~~~~d~EEVGs~ga~gA~s~~l 293 (450)
T 2glf_A 222 SGEIEVVPAFSPREVGMDRSLIGAYGQDDRICAYTALRALLSA-N-------PEKSIGVIFFDKEEIGSDGNTGAKARFY 293 (450)
T ss_dssp TEEEEEEECCCCEEESTTCCEEEETTHHHHHHHHHHHHHHHHC-C-------CSSCEEEEEESCGGGTSCSSSSSSSSHH
T ss_pred EEEEEEEecccceecccCCcEEEEecchhhHHHHHHHHHHHhc-C-------CCceEEEEEEcccccCCcchhhhcchhH
Confidence 9999999999999999999999999999999999999999987 2 2457899999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCChhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEE--cCCCCcc---cCHHH
Q 011000 333 FQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKH--NANQRYA---TSGVT 407 (496)
Q Consensus 333 ~d~l~ri~~~~~~~~~~~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~--~~~~~y~---t~~~~ 407 (496)
+|+|+||+.+++. ..+++.+++++++|++||+||+||.||||+++|+++|.+.||+|||||+ +++|+|+ +|+.+
T Consensus 294 ~~~l~ri~~~~~~-~~~~~~~~~~l~~s~~iS~DvahA~~Pn~~~~~~~~~~~~lg~Gpvik~~~~a~~~y~t~~~~~~~ 372 (450)
T 2glf_A 294 LKALRQILKMQGA-KDSEFVLDEVLENTSVISGDVCAAVNPPYKDVHDLHNAPKLGYGVALVKYTGARGKYSTNDAHAEF 372 (450)
T ss_dssp HHHHHHHHHHTTC-SSSHHHHHHHHHSCEEEEECCEECCCGGGGGGSCGGGCCCTTSCEEEESBCCSTTSTTCCBCCHHH
T ss_pred HHHHHHHHHhhcc-ccchHHHHHhhcCCeEEEEecccCcCCCCcccccccCCccCCcCCEEEEECCCCcccccccCCHHH
Confidence 9999999988753 1357889999999999999999999999999999999999999999996 4788898 59999
Q ss_pred HHHHHHHHHHCCCCEeEEEe-ccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHhhc
Q 011000 408 AFLFKEIAKLHNLPTQEFVV-RNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESF 485 (496)
Q Consensus 408 ~~~l~~ia~~~~Ip~Q~~~~-r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~~ 485 (496)
.++++++|+++|||||.+++ |+|++||||+|+|+ ++.||||+|||+|+|||||||||++++|++++++|+++||+++
T Consensus 373 ~~~~~~ia~~~~Ip~Q~~~~gr~d~~gGstig~i~-a~~Gi~tvdiGiP~l~MHS~~E~~~~~D~~~~~~l~~af~~~l 450 (450)
T 2glf_A 373 VARVRKVLNEQGVIWQVATLGKVDQGGGGTIAKFF-AERGSDVIDMGPALLGMHSPFEISSKADLFETYVAYRSLMEKL 450 (450)
T ss_dssp HHHHHHHHHHTTCCEEECCSSSTTSCCCCCTHHHH-HTTTSCEEEEECEEBSTTSSSEEEEHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEEeccCCCCCCCcHHHHH-hCCCCcEEEechhhcccchHHHHhhHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999998 99999999999999 7999999999999999999999999999999999999999864
No 4
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=100.00 E-value=7.5e-100 Score=809.37 Aligned_cols=425 Identities=20% Similarity=0.282 Sum_probs=369.7
Q ss_pred CccccCCCCCccccccccccchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCcccccc--ccccccCCCeEEEeecC
Q 011000 36 NRYRPRTLHNFSTSGIAQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNEN--DEWELKPGGGYFFTRNM 113 (496)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~Fl~~s~T~~h~v~~~~~~L~~~GF~~l~e~--~~w~l~~g~k~~~~r~g 113 (496)
|.|+++++|+ .++..+..++.+++++|++||++||||||||++++++|+++||+++.|. +.|+++||++||+||+|
T Consensus 1 ~~~~~~~~w~--~~~~~~~~~~~~~~~~~~~Fl~~spt~~hav~~~~~~l~~sGfe~l~e~~~~~w~l~~g~~~~~~~~g 78 (461)
T 2glj_A 1 LLKEYKNAWD--KYDDKQLKEVFALGDRFKNFISNCKTERECVTELIKTAEKSGYRNIEDILAKGETLKEGDKVYANNRG 78 (461)
T ss_dssp CCCCCCCSTT--TSCTTHHHHHHHTTHHHHHHHHHHHCCSSTHHHHHHHSCCSSCCCTTCCCSTTTTCCTTCCCEEEETT
T ss_pred CCcccCchhh--hCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHHHhhHhhccCCCCEEEEEcCC
Confidence 4678899999 6655555667789999999999999999999999999999999999988 88989999999999999
Q ss_pred cEEEEEEeCCcccCCCCeeEEEEeccCCceeeeeCCCCCCCcEEEEEc--CCCc----------------------EEEE
Q 011000 114 SCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGRVIVRG--SDGS----------------------FLHK 169 (496)
Q Consensus 114 ~~liA~~~G~~~~~~~g~~mi~AH~Dspgl~VKpi~~~~~~G~V~~~~--~~G~----------------------~~~~ 169 (496)
++||||++|+++ +++|++||+||||||||+|||+|+++++|++.+.. .||- ....
T Consensus 79 ~slia~~~G~~~-~~~g~~ii~AH~Dspgl~VK~~~~i~~~G~l~l~~~~yGG~~~~~w~~~~L~l~g~vv~~~g~~~~~ 157 (461)
T 2glj_A 79 KGLIMFLIGKEP-LYTGFKILGAHIDSPRLDLKQNPLYEDTDLAMLETHYYGGIKKYQWVTLPLAIHGVIVKKDGTIVNV 157 (461)
T ss_dssp TEEEECCCCSSC-GGGCCEEEEEECCCCBBCCCSSCEEECSSSEEECCCCBSCCCSCCCSSSCEEECCEEECTTCCEEEC
T ss_pred CEEEEEEeCCcC-ccCCceEEEEecCcCCeEEecCCccCCCCeEEEEeeccCCEeccccCCcccccceEEEEeCCCEEEE
Confidence 889999999763 23578999999999999999988877777777765 3432 1111
Q ss_pred EE--EcCCCeEEcCCCCcccccccccC-CCCCCCccceeeeeeccCCcccCCccccCCCCCCccCChhHHHHHHHHHcCC
Q 011000 170 LV--KVKRPLLRVPTLAIHLDRTVNKD-GFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGC 246 (496)
Q Consensus 170 lv--~~~~pv~vIp~laiHL~~~~~~~-~~~~n~~~~L~~diG~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~~a~~~gV 246 (496)
+| +.++||++||+|||||+++++++ ..+.+++++|+|++|..+.+. +++ +++|+..+++++++++||
T Consensus 158 ~Ig~~~~~pv~~Ip~laiHl~~~~~~~~~~~~~~~~~l~~~iG~~~~~~------~~e----~~~~~~~ll~~la~~~GI 227 (461)
T 2glj_A 158 CVGEDDNDPVFGVSDILVHLASEQLEKKASKVIEGEDLNILIGSIPLKD------GEE----KQKVKHNIMKILNEKYDI 227 (461)
T ss_dssp CBSCSTTSCBBCCCCCCGGGGGGTTSCTTCSSCCSCCCEEECSCCCSTT------CCC----SCHHHHHHHHHHHHSSCC
T ss_pred EEeccCCCcceecCCcccccCchhcccccccCCCcccceEEEecCcccc------ccc----hhhhHHHHHHHHHHHcCC
Confidence 22 34679999999999999876522 257899999999999865210 000 134677899999999999
Q ss_pred CCCceeEEeeeeeecCCccccCCCCCeeeccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccc
Q 011000 247 GTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQG 326 (496)
Q Consensus 247 ~~gDiv~~dl~~~d~~~~~~~Gl~~e~I~s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~g 326 (496)
++||+++|||++++.++++.+|++++||.|+|||||+|||++|+||+++.+ .+.+.++++||||||||+|++|
T Consensus 228 ~~gD~v~~dl~l~~~~~~~~~G~~~~~I~s~~lDdr~~~~~~l~al~~~~~-------~~~~~~~~~~d~EEVGs~ga~g 300 (461)
T 2glj_A 228 SEEDFVSAELEIVPAGKARDYGFDRSMVMGYGQDDRICAYTSFEAMLEMKN-------AKKTCITILVDKEEVGSIGATG 300 (461)
T ss_dssp CSTTGGGBCCCEEECSCCEEESTTCCEEEETTHHHHHHHHHHHHHHHTCCS-------CSSCEEEEEECCGGGTCCTTTT
T ss_pred CcccEEEeeeeeEecCCcEEecCCCCEEEEecchhHHHHHHHHHHHHhhcc-------CCCeEEEEEEccCCCCCccccc
Confidence 999999999999999999999999999999999999999999999998742 3457899999999999999999
Q ss_pred cCCCcHHHHHHHHHhhccCCCCChhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEc--CCCCcc--
Q 011000 327 AGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHN--ANQRYA-- 402 (496)
Q Consensus 327 A~s~~~~d~l~ri~~~~~~~~~~~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~--~~~~y~-- 402 (496)
|++.|++++|+||+.+++. .+++.+++++++|++||+||+||.||||+++|+++|.+.||+||+||++ ++++|+
T Consensus 301 a~s~~l~~~l~ri~~~~~~--~~~~~~~~~~~~S~~iS~Dv~ha~~pn~~~~~~~~~~~~lg~G~vIk~~~~~~g~y~~~ 378 (461)
T 2glj_A 301 MQSKFFENTVADIMSLCGD--YDELKLRKALYNSEMLSSDVSAAFDPNYPNVMEKRNSAYLGKGIVFNKYTGSRGKSGCN 378 (461)
T ss_dssp SSSTTHHHHHHHHTC-------CCSCCCHHHHTCEECCBCCEEBCCTTCCTTSCSTTSBCTTSCEEEBSCCCSTTSCSSC
T ss_pred cccchHHHHHHHHHHhcCC--CchHHHHHHHhcCcEEEEecccccCCCCcccccccCCcccCCCcEEEEEcCCCCccccc
Confidence 9999999999999866531 1356799999999999999999999999999999899999999999974 789996
Q ss_pred -cCHHHHHHHHHHHHHCCCCEeEEEe-ccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHH
Q 011000 403 -TSGVTAFLFKEIAKLHNLPTQEFVV-RNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKA 480 (496)
Q Consensus 403 -t~~~~~~~l~~ia~~~~Ip~Q~~~~-r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~a 480 (496)
+|+.+.++++++|+++|||||.+++ |+|++||||+|+++ ++.||||+|||+|+||||||||+++++|++++++|+++
T Consensus 379 ~~~~~~~~~l~~ia~~~~Ip~Q~~~~gr~d~~~GgTig~~~-a~~Gi~tvdiGiP~l~MHS~~E~~~~~Di~~~~~l~~a 457 (461)
T 2glj_A 379 DANPEYIAELRRILSKESVNWQTAELGKVDQGGGGTIAYIL-AEYGMQVIDCGVALLNMHAPWEISSKADIYETKNGYSA 457 (461)
T ss_dssp CCCHHHHHHHHHHHHHTCCCEEECCSSSSSSSCCCCTHHHH-HTTTCBCCBBCCEEESTTSSSEEEEHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHcCCCeEEEeeeccCCCCcccHHHHH-hCCCCCEEEEchhhcccchHHHHhhHHHHHHHHHHHHH
Confidence 4899999999999999999999998 99999999999998 59999999999999999999999999999999999999
Q ss_pred HHh
Q 011000 481 FYE 483 (496)
Q Consensus 481 f~~ 483 (496)
||+
T Consensus 458 f~~ 460 (461)
T 2glj_A 458 FLN 460 (461)
T ss_dssp TSC
T ss_pred HHh
Confidence 985
No 5
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=5.9e-97 Score=786.57 Aligned_cols=420 Identities=22% Similarity=0.302 Sum_probs=326.9
Q ss_pred ccCCCCCccccccccccchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEE
Q 011000 39 RPRTLHNFSTSGIAQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVA 118 (496)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~Fl~~s~T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA 118 (496)
+++++|+ .++..+..++.+++++|++||++||||||||++++++|+++||++|+|.+. ++||++||++|+|++|++
T Consensus 2 ~~~~~w~--~~~~~~~~~~~~~~~~~~~fl~~spT~~hav~~~~~~l~~~Gf~~l~e~~~--l~~g~~~~~~r~g~~i~a 77 (458)
T 1y7e_A 2 KKQNPWI--YLNEEEKNQILNFSESYKKFISKFKTEREVTAYALDKAKKLGFINAEEKKN--LMPGDKIFYTCREKSVAF 77 (458)
T ss_dssp --CCGGG--GCCHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTTCEESTTCCC--CCTTCEEECBCSSSCBCC
T ss_pred CcCchhh--cCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCcccccccc--cCCCCeEEEECCCCEEEE
Confidence 5679999 665555566778999999999999999999999999999999999999987 889999999999988999
Q ss_pred EEeCCcccCCCCeeEEEEeccCCceeeeeCCCCCCCcEEEEEc--CC----------------------CcEEEEEE--E
Q 011000 119 FAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGRVIVRG--SD----------------------GSFLHKLV--K 172 (496)
Q Consensus 119 ~~~G~~~~~~~g~~mi~AH~Dspgl~VKpi~~~~~~G~V~~~~--~~----------------------G~~~~~lv--~ 172 (496)
|.+|+++ +++|++||+||||||||+|||+|+++.+|++.+.. .| |+....+| +
T Consensus 78 ~~~G~~~-~~~g~~ii~AH~Dspgl~VK~~~~i~~~G~l~l~~~~yGG~~~~~w~~r~l~i~Grv~~~~g~~~~~~ig~~ 156 (458)
T 1y7e_A 78 AIIGKNP-IEDGMNFIVSHTDSPRLDAKPSPISEENELTFIKTNYYGGIKKYQWLSTPLSIRGVVFLKNGEKVEINIGDN 156 (458)
T ss_dssp EECCSSC-GGGCCEECCCBCCCCBCCCCSSCCEEETTEEEECCCCBSSCCGGGGTTCCEEEEEEEECTTCCEEEEEESSS
T ss_pred EEeCCCC-CCCCcEEEEEccCcCCeEEecCCccCCCCeEEEEeeccCCeehhhhcCCEEEEEEEEEecCCCEEEEEEecc
Confidence 9889763 24578999999999999999988876665555544 22 23233344 4
Q ss_pred cCCCeEEcCCCCcccccc-ccc-CCCCCCCccceeeeeeccCCcccCCccccCCCCCCccCChhHHHHHHHHHcCCCCCc
Q 011000 173 VKRPLLRVPTLAIHLDRT-VNK-DGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDD 250 (496)
Q Consensus 173 ~~~pv~vIp~laiHL~~~-~~~-~~~~~n~~~~L~~diG~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~~a~~~gV~~gD 250 (496)
.++|+++||+|||||+++ +++ ++++.+++++|+|++|..+... ++ ..+|+..|++++++++||++||
T Consensus 157 ~~~pi~~Ip~LaiHl~~~~~~~~~~~~~~~~~~l~~~ig~~~~~~-------ee----~~~~~~~ll~~l~~~~GI~~gD 225 (458)
T 1y7e_A 157 ENDPVFVIPDILPHLDRKIQRNKKSDEIVEGENLKILIGSLPIET-------KE----KNKVKLATLQLIKEKYKIEEED 225 (458)
T ss_dssp TTCCCBCCCCCC--------------------CCCEEEECCCCSC-------SS----SCHHHHHHHHHHHHHHCCCTTT
T ss_pred CCCceeccCCcCcccCchhhcccccccCCCccceEEEEecCcCch-------hh----hhhHHHHHHHHHHHHcCCCccc
Confidence 468999999999999987 553 2357899999999999865210 00 1346788999999999999999
Q ss_pred eeEEeeeeeecCCccccCCCCCeeeccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCC
Q 011000 251 IASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAP 330 (496)
Q Consensus 251 iv~~dl~~~d~~~~~~~Gl~~e~I~s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~ 330 (496)
+++|||++++.++++.+|++++||.|+|||||+|||++|+||+++... .+.+.++++||||||||+|++||++.
T Consensus 226 ~v~~dL~l~~~~~~~~~G~~~~~I~s~~lDdr~~~~~~l~al~~~~~~------~~~~~~~~~~d~EEVGs~ga~ga~s~ 299 (458)
T 1y7e_A 226 FVSSEIEIVPAGTAKDVGFDKALIGAYGQDDKICVFTSLESIFDLEET------PNKTAICFLVDKEEIGSTGSTGLDSR 299 (458)
T ss_dssp TSSSEEEEEECSCCEEETTTTCEEEESSHHHHHHHHHHHHHHSSSSCC------CSSCEECCCBCSTTC--------CTT
T ss_pred EEEeeeeeecccCeEEecCCCCeEEEecCccHHHHHHHHHHHHhhhcc------CCceEEEEEEcccccCcccchhhccc
Confidence 999999999999999999999999999999999999999999886421 34578999999999999999999999
Q ss_pred cHHHHHHHHHhh-c-cCCCCChhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEE-c-CCCCccc---
Q 011000 331 TMFQAIRRIVGS-L-AHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKH-N-ANQRYAT--- 403 (496)
Q Consensus 331 ~~~d~l~ri~~~-~-~~~~~~~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~-~-~~~~y~t--- 403 (496)
|++++|+||+.+ . +. .+++.+++++++|++||+||+||.|||||++++++|.+.||+||+||+ + ++|+|+|
T Consensus 300 ~l~~~l~ri~~~~~~~~--~~~~~~~~~~~~S~~is~Dv~ha~dPn~~~~~~~~~~~~lg~G~vIk~~d~~~~~y~t~~~ 377 (458)
T 1y7e_A 300 YLEYFVSDMIFKIKKSE--YNNLHVQKALWNSKSISADVCAAINPLFSSVHDEQNAPQLGYGIPIMKYTGHGGKSMASDA 377 (458)
T ss_dssp HHHHHHHHHHHHHSSTT--CCTHHHHHHHHHCEEEECCCEECCCC-------CTTSCCTTSCEEEEEEC-----------
T ss_pred hHHHHHHHHHHhhccCC--cchHHHHHHHhcceEEEEecccccCCCCcccccccCCcccCCCcEEEEEcCCCCccccccC
Confidence 999999999976 4 31 136789999999999999999999999999999999999999999996 3 7888965
Q ss_pred CHHHHHHHHHHHHHCCCCEeEEEe-ccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHH
Q 011000 404 SGVTAFLFKEIAKLHNLPTQEFVV-RNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 482 (496)
Q Consensus 404 ~~~~~~~l~~ia~~~~Ip~Q~~~~-r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~ 482 (496)
|+.+.++++++|+++|||||.++. |||++||||+|+++ ++.||||+|||+|+|||||++|+++++|++++++|+++||
T Consensus 378 ~~~~~~~l~~~a~~~~Ip~Q~~~~~r~d~~~GgT~~~~~-a~~Gi~tvdiGiP~~~mHS~~E~~~~~Di~~~~~ll~af~ 456 (458)
T 1y7e_A 378 DAELVSYIRQLLNKNNIAWQVATLGKVEEGGGGTVAKFL-AGYGIRTIDMGPAVISMHSPMEITSKFDLYNAYLAYKAFY 456 (458)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEECC-----CHHHHHHH-HHHTCEEEEECCEEBSTTSSSEEEEHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeeccCCCCcCcHHHHH-hCCCCCEEEEchhhcccchHHHHhhHHHHHHHHHHHHHHH
Confidence 899999999999999999999999 99999999999888 5899999999999999999999999999999999999998
Q ss_pred h
Q 011000 483 E 483 (496)
Q Consensus 483 ~ 483 (496)
+
T Consensus 457 ~ 457 (458)
T 1y7e_A 457 R 457 (458)
T ss_dssp T
T ss_pred h
Confidence 6
No 6
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.9e-99 Score=796.32 Aligned_cols=396 Identities=41% Similarity=0.695 Sum_probs=320.9
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEecc
Q 011000 60 IVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTD 139 (496)
Q Consensus 60 ~a~~~~~Fl~~s~T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~D 139 (496)
++++|++||++||||||||++++++|+++||++|+|.+.|+++||++||+||+|+|||||++|+++.+++|++||+||||
T Consensus 4 ~~~~~~~fl~~~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~D 83 (428)
T 2ijz_A 4 LNQGLIDFLKASPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTD 83 (428)
T ss_dssp ----CCCSSTTTHHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCC
Confidence 78999999999999999999999999999999999999999999999999999779999999987544578999999999
Q ss_pred CCceeeeeCCCCCCCcEEE--EEcCCCc----E-------EEE------------EEEcCCCeEEcCCCCcccccccccC
Q 011000 140 SPCLKLKPKSASSKSGRVI--VRGSDGS----F-------LHK------------LVKVKRPLLRVPTLAIHLDRTVNKD 194 (496)
Q Consensus 140 spgl~VKpi~~~~~~G~V~--~~~~~G~----~-------~~~------------lv~~~~pv~vIp~laiHL~~~~~~~ 194 (496)
||||+|||+|+++++|++. +...||- + ..+ +++.++|+++||+|||||+++++ +
T Consensus 84 spgl~Vk~~~~i~~~G~l~~~v~~yGG~~~~~W~dr~l~lagrV~v~~~~~~~~~l~~~~~~~~~I~~laiHl~~~~~-~ 162 (428)
T 2ijz_A 84 SPCLRVKPNPEIARNGFLQLGVEVYGGALFAPWFDRDLSLAGRVTFRANGKLESRLVDFRKAIAVIPNLNIHLNRAAN-E 162 (428)
T ss_dssp CSEEEEEEEEEEEETTEEEEEEEEESCCCSTTSSSCCEEEEEEEETTTEEEEECCSCCCBCCCCCSSCCC----------
T ss_pred cCCeEEecCCcccCCCEEEEeeEECCCeecccccCcccccCcEEEEECCCeeeeeccccCCceEEEeCCCcccCchhh-c
Confidence 9999999988877789888 5555551 1 122 22334599999999999998776 4
Q ss_pred CCCCCCccceeeeeeccCCcccCCccccCCCCCCccCChhHHHHHHHHHcCCCCCceeEEeeeeeecCCccccCCCCCee
Q 011000 195 GFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFI 274 (496)
Q Consensus 195 ~~~~n~~~~L~~diG~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~~a~~~gV~~gDiv~~dl~~~d~~~~~~~Gl~~e~I 274 (496)
+++++++++|+||+|+.+.++ +++|+..|++++++++||++||+++|||+++|.++++.+|++++||
T Consensus 163 ~~~~~~~~~l~~~ig~~~~~~-------------~~~~~~~~~~~~a~~~GI~~gD~v~~dL~~~~~~~~~~~G~~~~~I 229 (428)
T 2ijz_A 163 GWPINAQNELPPIIAQLAPGE-------------AADFRLLLDEQLLREHGITADVVLDYELSFYDTQSAAVVGLNDEFI 229 (428)
T ss_dssp --CCCCSTTSCCEEECCCSCC-------------------------------CCCCCCCSCCTTCEEECCSCCCCCSSSS
T ss_pred ccCCCccCceEEEEecCCccc-------------ccchhhHHHHHHHHHcCCCccceEEEEeeecCCCceEEeccCCCeE
Confidence 578999999999999865210 1235567889999999999999999999999999999999999999
Q ss_pred eccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHh
Q 011000 275 FSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFE 354 (496)
Q Consensus 275 ~s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~ 354 (496)
.|+|||||+|||++|+||+++. . .. +.++++||||||||+|++||+|.|+|++|+||+.+ ++.++
T Consensus 230 ~s~~lDdr~~~~~~l~al~~~~-~------~~-~~v~~~fd~EEVGs~ga~gA~s~~~~~~l~ri~~~-------~~~~~ 294 (428)
T 2ijz_A 230 AGARLDNLLSCHAGLEALLNAE-G------DE-NCILVCTDHEEVGSCSHCGADGPFLEQVLRRLLPE-------GDAFS 294 (428)
T ss_dssp SCCCSSCSSTTTTTTTHHHHTT-S------CS-SSCEEEECBSCTTTTCHHHHSSCCTTTSCCSSSSS-------SSSST
T ss_pred EeecCccHHHHHHHHHHHHhcc-c------CC-ceEEEEEeccccCccchhhhhccccHHHHHHhhhh-------hhHHH
Confidence 9999999999999999999874 1 12 23455569999999999999999999999999753 46789
Q ss_pred hhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCC
Q 011000 355 CTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCG 434 (496)
Q Consensus 355 ~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG 434 (496)
+++++|++||+||+||.||||+++|+++|.+.||+||+||++++|+|++|+.+.++++++|+++|||||.++.|||++||
T Consensus 295 ~~~~~s~~is~Dv~ha~~Pn~~~~~~~~~~~~lg~G~vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q~~~~~~d~~gG 374 (428)
T 2ijz_A 295 RAIQRSLLVSADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQSFVTRSDMGCG 374 (428)
T ss_dssp TTTTSCCEEEECCCCCCCSSCGGGCCSSCCCSSSCCCBCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCCBCCCCSSCCCC
T ss_pred hhhhcCEEEEEecccccCCCCcccccccCCcccCCCcEEEEECCCCCCCCHHHHHHHHHHHHHcCCCeEEEEEeCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHhh
Q 011000 435 STIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYES 484 (496)
Q Consensus 435 ~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~ 484 (496)
||+|+|++++.||||+|||+|+|||||++|+++++|++++++|+++||++
T Consensus 375 sd~g~i~~~~~Gi~tvdiGip~~~mHS~~E~~~~~D~~~~~~ll~af~~~ 424 (428)
T 2ijz_A 375 STIGPITASQVGVRTVDIGLPTFAMHSIRELAGSHDLAHLVKVLGAFYAS 424 (428)
T ss_dssp CCCSTTTGGGGSCCEEEECCCCCSCSSSSCCCCSSHHHHHHTTHHHHTTC
T ss_pred chHHHHHHhCCCCCEEEEchhhcccchHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999986
No 7
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=100.00 E-value=2.1e-59 Score=484.60 Aligned_cols=298 Identities=19% Similarity=0.142 Sum_probs=248.6
Q ss_pred CCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCceeeeeCCCCCCCcEEEEEcCCCc----E--EEEEEEcC-C-
Q 011000 104 GGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGRVIVRGSDGS----F--LHKLVKVK-R- 175 (496)
Q Consensus 104 g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl~VKpi~~~~~~G~V~~~~~~G~----~--~~~lv~~~-~- 175 (496)
|+++++|+.| |+++.+.|+. +.+|+.||||++||+|+.|.+ +|++.+.+.||- + .++.|.++ +
T Consensus 44 g~~~~~D~~G-Nvi~~~~g~~-----~~v~l~aHmDtVg~mV~~I~~---~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~ 114 (354)
T 2vpu_A 44 ADEVKVDKLG-NVIAHFKGSS-----PRIMVAAHMDKIGVMVNHIDK---DGYLHIVPIGGVLPETLVAQRIRFFTEKGE 114 (354)
T ss_dssp CSEEEECTTC-CEEEEECCSS-----SEEEEECCCCBCEEEEEEECT---TSCEEEEEESSCCGGGGTTCEEEEEETTEE
T ss_pred CCEEEEcCCC-eEEEEEcCCC-----CEEEEEecccccceeEEEECC---CCEEEEEccCCcccccccCCEEEEEcCCCc
Confidence 4567788898 8999876642 469999999999999999865 899999988652 1 23455543 3
Q ss_pred CeEEcCCCCccccccc-ccCCCCCCCccceeeeeeccCCcccCCccccCCCCCCccCChhHHHHHHHHHcCCCCCceeEE
Q 011000 176 PLLRVPTLAIHLDRTV-NKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASI 254 (496)
Q Consensus 176 pv~vIp~laiHL~~~~-~~~~~~~n~~~~L~~diG~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~~a~~~gV~~gDiv~~ 254 (496)
..|||+..+||+.+++ +++ +..+.++|++|+|+.+++ +++++||++||+++|
T Consensus 115 ~~Gvi~~~~~H~~~~~~~~~--~~~~~~~l~iD~g~~s~e-------------------------e~~~~GI~~Gd~v~~ 167 (354)
T 2vpu_A 115 RYGVVGVLPPHLRRGQEDKG--SKIDWDQIVVDVGASSKE-------------------------EAEEMGFRVGTVGEF 167 (354)
T ss_dssp EEEEECCCCSTTC-----------CCGGGCCEECSCSSHH-------------------------HHHHTTCCTTCEEEE
T ss_pred EEEEEcCCCccccCcccccc--cCCCcceEEEEecCCCHH-------------------------HHHhcCCCCCCEEEE
Confidence 3599999999998765 433 455678999999998864 678999999999999
Q ss_pred eeeeeecCCccccCCCCCeeeccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHH
Q 011000 255 ELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQ 334 (496)
Q Consensus 255 dl~~~d~~~~~~~Gl~~e~I~s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d 334 (496)
|+++++ ++++||.|++||||+|||+++++|+++++ .+.+.+++|++|||||++|+++|++.+.||
T Consensus 168 d~~~~~--------~~~~~i~s~~lDnr~g~~~~l~~l~~l~~-------~~~~v~~~ft~qEEVG~~ga~~aa~~i~pd 232 (354)
T 2vpu_A 168 APNFTR--------LNEHRFATPYLDDRICLYAMIEAARQLGD-------HEADIYIVGSVQEEVGLRGARVASYAINPE 232 (354)
T ss_dssp CCCCEE--------CSSSEEECTTHHHHHHHHHHHHHHHHCCC-------CSSEEEEEECSCCTTTSHHHHHHHHHHCCS
T ss_pred eeEEEE--------eCCceEEEecCccHHHHHHHHHHHHHhhc-------CCCeEEEEEECCcccCccchhhhhcccCCC
Confidence 999987 45789999999999999999999998742 245788899999999999999998876554
Q ss_pred HHHHHHhhccCCCCChhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHH
Q 011000 335 AIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEI 414 (496)
Q Consensus 335 ~l~ri~~~~~~~~~~~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~i 414 (496)
++||+||+||.||+| +..+.+.||+||+++ +++.+|+.+.++++++
T Consensus 233 --------------------------~~i~~Dv~~a~dp~~----~~~~~~~lg~Gpv~d----~~~~~~~~l~~~l~~~ 278 (354)
T 2vpu_A 233 --------------------------VGIAMDVTFAKQPHD----KGKIVPELGKGPVMD----VGPNINPKLRAFADEV 278 (354)
T ss_dssp --------------------------EEEEEEEEECCCTTS----TTCCCCCTTSCCEEE----ESTTSCHHHHHHHHHH
T ss_pred --------------------------EEEEecccccCCCCc----ccccCceECCcceEc----CCCCCCHHHHHHHHHH
Confidence 899999999999998 234679999999886 2588999999999999
Q ss_pred HHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHhhcccc
Q 011000 415 AKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSI 488 (496)
Q Consensus 415 a~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~~~~~ 488 (496)
|+++|||||.++. +.+||+|+++++.++.||||++||+|+|||||++|+++.+|++++++++.+|++++..-
T Consensus 279 a~~~gIp~q~~~~--~g~gGtDa~~i~~a~~Gipt~~Igvp~~~~Hs~~E~~~~~D~~~~~~ll~~~l~~l~~~ 350 (354)
T 2vpu_A 279 AKKYEIPLQVEPS--PRPTGTDANVMQINKEGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPM 350 (354)
T ss_dssp HHHTTCCCEEEEC--CSCCSSTHHHHHTSTTCCEEEEEEEEEBSTTSTTCEEEHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHcCCCcEEEeC--CCCCccHHHHHHHhcCCCCEEEECcccccCcCcceEeeHHHHHHHHHHHHHHHHhccHh
Confidence 9999999999873 12256668899999999999999999999999999999999999999999999988653
No 8
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=100.00 E-value=1.8e-58 Score=475.27 Aligned_cols=294 Identities=15% Similarity=0.101 Sum_probs=250.3
Q ss_pred ccC-CCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCceeeeeCCCCCCCcEEEEEcCCCc----E--EEEEEEc
Q 011000 101 LKP-GGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGRVIVRGSDGS----F--LHKLVKV 173 (496)
Q Consensus 101 l~~-g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl~VKpi~~~~~~G~V~~~~~~G~----~--~~~lv~~ 173 (496)
+++ ++++++|+.| |+++.+ |++ .+.+|+.||||++||+|+.|.+ +|++.+.+.||- + .++.|.+
T Consensus 41 l~~~~~e~~~D~~G-nvi~~~-g~~----~~~v~l~aHmDevG~mV~~I~~---~G~l~~~~vGG~~~~~~~~~~v~i~t 111 (343)
T 3isx_A 41 LEGHIDGHRIDGLG-NLIVWK-GSG----EKKVILDAHIDEIGVVVTNVDD---KGFLTIEPVGGVSPYMLLGKRIRFEN 111 (343)
T ss_dssp HTTTCSEEEECTTC-CEEEEE-CCC----SSEEEEEEECCBCEEEEEEECT---TSCEEEEEESSCCHHHHTTCEEEETT
T ss_pred HHHhCCEEEECCCC-CEEEEE-CCC----CCEEEEEecccccceEEEEECC---CCeEEEEecCCcCccccCCcEEEEec
Confidence 445 6788999999 899876 531 3469999999999999999865 799999988762 1 1334544
Q ss_pred CCCeEEcCCCCcccccccccCCCCCCCccceeeeeeccCCcccCCccccCCCCCCccCChhHHHHHHHHHcCCCCCceeE
Q 011000 174 KRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIAS 253 (496)
Q Consensus 174 ~~pv~vIp~laiHL~~~~~~~~~~~n~~~~L~~diG~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~~a~~~gV~~gDiv~ 253 (496)
+ ..|+|+..+||+.++++++ +..+.++|++|+|+.+++ +++++ |++||+|+
T Consensus 112 ~-~~Gvig~~~~H~~~~~~~~--~~~~~~~l~iD~g~~s~e-------------------------e~~~~-I~vGd~v~ 162 (343)
T 3isx_A 112 G-TIGVVGMEGETTEERQENV--RKLSFDKLFIDIGANSRE-------------------------EAQKM-CPIGSFGV 162 (343)
T ss_dssp S-CEEEEEECCCSHHHHHHHH--HTCCGGGEEEECSCSSHH-------------------------HHHHH-SCTTCEEE
T ss_pred c-EEEEEecccccccChhhcc--cCCCcceEEEEeCCCCHH-------------------------HHHhc-CCCCCEEE
Confidence 4 6799999999998765433 345678999999998864 66788 99999999
Q ss_pred EeeeeeecCCccccCCCCCeeeccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHH
Q 011000 254 IELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMF 333 (496)
Q Consensus 254 ~dl~~~d~~~~~~~Gl~~e~I~s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~ 333 (496)
||..+... + +||.|++||||+|||+++++|++++. +.+.+++|++|||||++|+++|++.+.|
T Consensus 163 ~~~~~~~~--------~-~~i~s~~lDdR~g~~~~l~~l~~l~~--------~~~~~~~ft~qEEVG~~Ga~~aa~~i~p 225 (343)
T 3isx_A 163 YDSGFVEV--------S-GKYVSKAMDDRIGCAVIVEVFKRIKP--------AVTLYGVFSVQEEVGLVGASVAGYGVPA 225 (343)
T ss_dssp ESCCCEEE--------T-TEEEESCHHHHHHHHHHHHHHHHCCC--------SSEEEEEEECCCCTTSCCSTTTGGGCCC
T ss_pred ecCceEEe--------c-cEEEeccCccHHHHHHHHHHHHhccC--------CCeEEEEEECCcccCchhHHHHhhcCCC
Confidence 99876553 2 59999999999999999999998742 4578999999999999999999998766
Q ss_pred HHHHHHHhhccCCCCChhhHhhhcccceEEEEecCCCCC-CCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHH
Q 011000 334 QAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVH-PNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFK 412 (496)
Q Consensus 334 d~l~ri~~~~~~~~~~~~~~~~~l~~S~~iS~DvahA~~-Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~ 412 (496)
| ++||+||+||.| |++++ ++.+.||+||+|+++++ ++.+|+.+.++++
T Consensus 226 d--------------------------~~i~vDv~~a~d~p~~~~----~~~~~lg~GpvI~~~d~-~~~~d~~l~~~l~ 274 (343)
T 3isx_A 226 D--------------------------EAIAIDVTDSADTPKAIK----RHAMRLSGGPALKVKDR-ASISSKRILENLI 274 (343)
T ss_dssp S--------------------------EEEEEEEEECCCSTTCCC----TTCCCTTSCCEEECBTT-CCHHHHHHHHHHH
T ss_pred C--------------------------EEEEEeCcCCCCCCCccc----ccccccCCCcEEEEcCC-CCCCCHHHHHHHH
Confidence 5 899999999998 98863 35789999999999998 4999999999999
Q ss_pred HHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHh
Q 011000 413 EIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYE 483 (496)
Q Consensus 413 ~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~ 483 (496)
++|+++|||||.++.+ +||+++++++.++.||||++||+|+|||||++|+++++|++++++|+.+|++
T Consensus 275 ~~A~~~gIp~Q~~v~~---ggGTDa~~i~~a~~Gipt~~Igvp~r~~Hs~~E~~~~~Di~~~~~ll~~~l~ 342 (343)
T 3isx_A 275 EIAEKFDIKYQMEVLT---FGGTNAMGYQRTREGIPSATVSIPTRYVHSPSEMIAPDDVEATVDLLIRYLG 342 (343)
T ss_dssp HHHHHTTCCCEECCCB---CCCSSHHHHHHHTSSCCEEEEEEEEBSTTSTTEEECHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCCeEEecCC---CCchHHHHHHHhcCCCCEEEEccccccccchhhEecHHHHHHHHHHHHHHHh
Confidence 9999999999998753 3666688999999999999999999999999999999999999999999985
No 9
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=100.00 E-value=6.8e-57 Score=466.02 Aligned_cols=301 Identities=12% Similarity=0.023 Sum_probs=239.8
Q ss_pred CCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCceeeeeCCCCCCCcEEEEEcCCCc----E--EEEEEEcC-C-
Q 011000 104 GGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGRVIVRGSDGS----F--LHKLVKVK-R- 175 (496)
Q Consensus 104 g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl~VKpi~~~~~~G~V~~~~~~G~----~--~~~lv~~~-~- 175 (496)
|.++++|+.| |++|.+.|.+. ..+.+|+.||||++||+|+.|.+ +|++.+.+.||- + .++.|.++ +
T Consensus 37 g~~~~~D~~G-Nli~~~~g~~~--~~~~v~l~aHmD~Vg~mV~~I~~---~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~ 110 (355)
T 3kl9_A 37 VDEVVTDGLG-GIFGIKHSEAV--DAPRVLVASHMDEVGFMVSEIKP---DGTFRVVEIGGWNPMVVSSQRFKLLTRDGH 110 (355)
T ss_dssp SSEEEECTTS-CEEEEECCCST--TCCEEEEEEECCBCEEEEEEECT---TSCEEEEEESCCCTTTCSSCEEEEECTTSC
T ss_pred CCEEEECCCC-eEEEEECCcCC--CCCeEEEEeccccccceEEEECC---CCEEEEEecCCccccccCCCEEEEEcCCCC
Confidence 3456678888 89998766431 13479999999999999999865 799999988662 1 23455553 3
Q ss_pred -CeEEcCCCCcccccccccCCCCCCCccceeeeeeccCCcccCCccccCCCCCCccCChhHHHHHHHHHcCCCCCceeEE
Q 011000 176 -PLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASI 254 (496)
Q Consensus 176 -pv~vIp~laiHL~~~~~~~~~~~n~~~~L~~diG~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~~a~~~gV~~gDiv~~ 254 (496)
..|+|+..+||+.++++++ +..+.++|++|+|+.+++ +++++||++||+++|
T Consensus 111 ~~~Gvig~~~~H~~~~~~~~--~~~~~~~~~iD~g~~s~e-------------------------e~~~~GI~~Gd~v~~ 163 (355)
T 3kl9_A 111 EIPVISGSVPPHLTRGKGGP--TMPAIADIVFDGGFADKA-------------------------EAESFGIRPGDTIVP 163 (355)
T ss_dssp EEEEEEC-----------------CCGGGSCEECCCSSHH-------------------------HHHHTTCCTTCEEEE
T ss_pred EEEEEEeCccccccChhhcc--CCCChhhEEEEeccCCHH-------------------------HHHHcCCCCCCEEEe
Confidence 3699999999998765433 455678999999998864 678999999999999
Q ss_pred eeeeeecCCccccCCCCCeeeccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHH
Q 011000 255 ELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQ 334 (496)
Q Consensus 255 dl~~~d~~~~~~~Gl~~e~I~s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d 334 (496)
|..+... | +++||.|++||||+|||+++++|+++++. ..+.+.+++|++|||||++|+++|++.+.|
T Consensus 164 d~~~~~~------~-~~~~i~s~~lDnr~g~~~~l~~l~~l~~~-----~~~~~v~~~ft~qEEvG~~Ga~~a~~~~~p- 230 (355)
T 3kl9_A 164 DSSAILT------A-NEKNIISKAWDNRYGVLMVSELAEALSGQ-----KLGNELYLGSNVQEEVGLRGAHTSTTKFDP- 230 (355)
T ss_dssp CCCCEEC------T-TSSEEEESCHHHHHHHHHHHHHHHHHSSC-----CCSSEEEEEEESCCTTTSHHHHHHHHHHCC-
T ss_pred ccceEEe------c-CCCEEEeeccccHHHHHHHHHHHHHhhhc-----CCCceEEEEEECccccCcchhHHHHhccCC-
Confidence 9886553 2 46799999999999999999999988642 135678999999999999999999887655
Q ss_pred HHHHHHhhccCCCCChhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHH
Q 011000 335 AIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEI 414 (496)
Q Consensus 335 ~l~ri~~~~~~~~~~~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~i 414 (496)
+++||+||+||.|| |+. .++||+||+|++++++ +.+|+.+.++++++
T Consensus 231 -------------------------d~~i~~D~~~a~d~--p~~-----~~~lg~G~~i~~~d~~-~~~~~~l~~~l~~~ 277 (355)
T 3kl9_A 231 -------------------------EVFLAVDCSPAGDV--YGG-----QGKIGDGTLIRFYDPG-HLLLPGMKDFLLTT 277 (355)
T ss_dssp -------------------------SEEEEEEEEECCGG--GTS-----SCCTTSCEEEEEEETT-EECCHHHHHHHHHH
T ss_pred -------------------------CEEEEecCccCCCC--CCc-----ccccCCCcEEEEecCC-CCCCHHHHHHHHHH
Confidence 48999999999984 221 5789999999999884 89999999999999
Q ss_pred HHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHhhccc
Q 011000 415 AKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSS 487 (496)
Q Consensus 415 a~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~~~~ 487 (496)
|+++|||||. +.+ +||+++++++.++.||||++||+|+|||||++|+++.+|++++++|+.+|++++..
T Consensus 278 a~~~gIp~q~-~~~---ggGtDa~~i~~a~~Gipt~~igvp~~~~Hs~~E~~~~~Di~~~~~ll~~~l~~l~~ 346 (355)
T 3kl9_A 278 AEEAGIKYQY-YCG---KGGTDAGAAHLKNGGVPSTTIGVCARYIHSHQTLYAMDDFLEAQAFLQALVKKLDR 346 (355)
T ss_dssp HHHTTCCEEE-EEC---SSCCTHHHHTTSTTCCCEEEEEEEEBSCSSSCEEEEHHHHHHHHHHHHHHHHTCCH
T ss_pred HHHcCCCEEE-ECC---CcchHHHHHHHhCCCCCEEEEccCcCCCCCcceEeeHHHHHHHHHHHHHHHHHhCH
Confidence 9999999999 543 35566789998899999999999999999999999999999999999999998854
No 10
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=9.4e-41 Score=342.30 Aligned_cols=317 Identities=18% Similarity=0.104 Sum_probs=244.2
Q ss_pred HHHHHHHHHHHhcCCChH--HHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEE
Q 011000 58 SSIVGDLLDYLNESWTPF--HATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIA 135 (496)
Q Consensus 58 ~~~a~~~~~Fl~~s~T~~--h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~ 135 (496)
.++.++++++ .|||.+ .+.+++++.|++.|| ++++|+.| ||+|+..|+. .+.+|++
T Consensus 8 ~~~l~~Lv~~--~s~sg~e~~~~~~l~~~l~~~g~---------------~~~~d~~g-nlia~~~g~~----~~~i~l~ 65 (346)
T 1vho_A 8 GKLLMELSNL--DGPSGYETNVVSYIKSVIEPFVD---------------EAKTTRHG-SLIGYKKGKG----IGKLAFF 65 (346)
T ss_dssp HHHHHHHHHS--CCBTTCCHHHHHHHHHHHGGGCS---------------EEEECTTS-CEEEEECCSS----SCEEEEE
T ss_pred HHHHHHHHcC--CCCCcchHHHHHHHHHHHHhhCC---------------EEEEecCC-cEEEEEcCCC----CceEEEE
Confidence 3455555554 455543 367777777777665 35557777 8999886642 3579999
Q ss_pred EeccCCceeeeeCCCCCCCcEEEEEcCCCcEEE-------EEEEc-C-CCeEEcCCCCcccccccccCCCCCCCccceee
Q 011000 136 AHTDSPCLKLKPKSASSKSGRVIVRGSDGSFLH-------KLVKV-K-RPLLRVPTLAIHLDRTVNKDGFKPNLETQLIP 206 (496)
Q Consensus 136 AH~Dspgl~VKpi~~~~~~G~V~~~~~~G~~~~-------~lv~~-~-~pv~vIp~laiHL~~~~~~~~~~~n~~~~L~~ 206 (496)
||||+++++||++. +|++.+.+.+| +.. ..+.. + .+.|+|+.+++|+.++.++. +.+++++|+|
T Consensus 66 aH~DtV~~~v~~i~----~G~l~~~~~Gg-~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~--~~~~~~~l~i 138 (346)
T 1vho_A 66 AHVDEIGFVVSKVE----GQFARLEPVGG-VDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRK--KVPTYDEIFV 138 (346)
T ss_dssp EECCBCCEEEEEEE----TTEEEEEEC---------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHH--TSCCTTCCEE
T ss_pred ecCcccceEeEEec----CCeEEEEEeCC-ccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcc--cCCChhHeEE
Confidence 99999999999985 69998876654 221 12332 3 35699999999998875432 5677899999
Q ss_pred eeeccCCcccCCccccCCCCCCccCChhHHHHHHHHHcCCCCCceeEEeeeeeecCCccccCCCCCeeeccCCCchhhHH
Q 011000 207 LLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSY 286 (496)
Q Consensus 207 diG~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~~a~~~gV~~gDiv~~dl~~~d~~~~~~~Gl~~e~I~s~~LDNr~~~~ 286 (496)
|+|..+ + + |++||+++++..+.. .| +++.|+++|||.||+
T Consensus 139 d~g~~~-e----------------------------e--i~~G~~~~~~~~~~~------~g---~~i~g~~~D~r~g~a 178 (346)
T 1vho_A 139 DLSLCE-R----------------------------G--VRVGDIAVIDQTAFE------TN---GKVVGKALDNRASCG 178 (346)
T ss_dssp EGGGSS-S----------------------------C--CCTTCEEEECCCCEE------ET---TEEEETTHHHHHHHH
T ss_pred Eeccch-h----------------------------c--CCCCCEEEEccchhh------hc---CeEEeccCccHHHHH
Confidence 999754 2 1 889999999986532 33 789999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHhhhcccceEEEEe
Q 011000 287 CGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSAD 366 (496)
Q Consensus 287 ~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~~~l~~S~~iS~D 366 (496)
++++++..+... . .+...++++|+|||||++|++++... +.++++|++|
T Consensus 179 a~l~al~~l~~~--~---~~~~~~~~~t~~EEvG~~Ga~~~~~~--------------------------i~~~~~i~~D 227 (346)
T 1vho_A 179 VLVKVLEFLKRY--D---HPWDVYVVFSVQEETGCLGALTGAYE--------------------------INPDAAIVMD 227 (346)
T ss_dssp HHHHHHHHHTTC--C---CSSEEEEEEECTTSSSHHHHHHTTCC--------------------------CCCSEEEEEE
T ss_pred HHHHHHHHhhhc--C---CCceEEEEEECCcccchhhHHHHhcc--------------------------cCCCEEEEee
Confidence 999999987532 1 23467889999999999999987654 4556999999
Q ss_pred cCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeccCCC-CCCChHHHHhcCC
Q 011000 367 MAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMG-CGSTIGPILASGV 445 (496)
Q Consensus 367 vahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~-gG~Tig~i~~s~~ 445 (496)
++|+.+ +++.+ .+.+|+||+|++ .+..|+.+.+.++++|++.|||+|..+.+ + ||++.+.+..++.
T Consensus 228 ~~~~~~--~~~~~----~~~~~~g~~i~~----~~~~~~~l~~~~~~~a~~~gi~~~~~~~~---g~ggsDa~~~~~~~~ 294 (346)
T 1vho_A 228 VTFASE--PPFSD----HIELGKGPVIGL----GPVVDRNLVQKIIEIAKKHNVSLQEEAVG---GRSGTETDFVQLVRN 294 (346)
T ss_dssp EECCCC--TTSCC----CCCTTSCCEEEC----STTSCHHHHHHHHHHHHHTTCCCEEESSC---CC----CTTHHHHHT
T ss_pred cccccC--CCCCc----ccccCCCceEEe----CCcCCHHHHHHHHHHHHHCCCCEEEEeCC---CCCCchHHHHHHhCC
Confidence 999874 44433 178999999998 47889999999999999999999997641 2 4555777877789
Q ss_pred CCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHhhccc
Q 011000 446 GIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSS 487 (496)
Q Consensus 446 Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~~~~ 487 (496)
||||+++|+|+++|||++|+++.+|++.+++++.+|++.+..
T Consensus 295 gipt~~lg~~~~~~Hs~~E~~~~~dl~~~~~ll~~~~~~~~~ 336 (346)
T 1vho_A 295 GVRTSLISIPLKYMHTPVEMVDPRDVEELARLLSLVAVELEV 336 (346)
T ss_dssp TCEEEEEEEECBSTTSTTEEECHHHHHHHHHHHHHHHHHCC-
T ss_pred CCcEEEEehhhcccccHHHhcCHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999988754
No 11
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=100.00 E-value=2e-40 Score=341.40 Aligned_cols=327 Identities=17% Similarity=0.156 Sum_probs=244.8
Q ss_pred HHHHHHHHHhcCCChHH---HHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEE
Q 011000 60 IVGDLLDYLNESWTPFH---ATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAA 136 (496)
Q Consensus 60 ~a~~~~~Fl~~s~T~~h---~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~A 136 (496)
+.++|+++ .|||-++ +.+++++.|++.||+ +++|+.| |++|+..|+ ++.+|++|
T Consensus 11 ~l~~L~~~--~s~sg~e~~~~~~~l~~~l~~~g~~---------------~~~d~~g-nlia~~~g~-----~~~i~l~a 67 (353)
T 1y0y_A 11 LLKKVVEA--PGVSGYEFLGIRDVVIEEIKDYVDE---------------VKVDKLG-NVIAHKKGE-----GPKVMIAA 67 (353)
T ss_dssp HHHHHHHS--CCBTTCGGGTHHHHHHHHHGGGSSE---------------EEECTTC-CEEEEECCS-----SCEEEEEE
T ss_pred HHHHHHhC--CCCCccchHHHHHHHHHHHHhhCCe---------------EEEcCCC-CEEEEecCC-----CccEEEEe
Confidence 34444443 3444333 566677777776663 4456677 899987543 24799999
Q ss_pred eccCCceeeeeCCCCCCCcEEEEEcCCCcE------EEEEEEc-CC--CeEEcCCCCcccccccccCCCCCCCccceeee
Q 011000 137 HTDSPCLKLKPKSASSKSGRVIVRGSDGSF------LHKLVKV-KR--PLLRVPTLAIHLDRTVNKDGFKPNLETQLIPL 207 (496)
Q Consensus 137 H~Dspgl~VKpi~~~~~~G~V~~~~~~G~~------~~~lv~~-~~--pv~vIp~laiHL~~~~~~~~~~~n~~~~L~~d 207 (496)
|||+|||+||++.+ +|++.+.+.||.. .++.+.. ++ ..|+|+.++||+.++.++ .+.+++++|++|
T Consensus 68 H~D~v~~~v~~i~~---~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~--~~~~~~~~l~~d 142 (353)
T 1y0y_A 68 HMDQIGLMVTHIEK---NGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDR--KKAPDWDQIFID 142 (353)
T ss_dssp ECCBCEEEEEEECT---TSCEEEEEESSCCGGGTTTCEEEEEEETTEEEEEEEEC---------------CCCGGGCEEE
T ss_pred ccCcccEEEEEECC---CceEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhc--cCCCChHHeEEE
Confidence 99999999999754 7999987765410 1233433 22 359999999999876542 367888999999
Q ss_pred eeccCCcccCCccccCCCCCCccCChhHHHHHHHHHcCCCCCceeEEeeeeeecCCccccCCCCCeeeccCCCchhhHHH
Q 011000 208 LATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYC 287 (496)
Q Consensus 208 iG~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~~a~~~gV~~gDiv~~dl~~~d~~~~~~~Gl~~e~I~s~~LDNr~~~~~ 287 (496)
+|+.+++ +++++||.+||++++|..+.. +++++|.|+++||+.||++
T Consensus 143 ~g~~~~~-------------------------~~~~~gi~~Gd~v~~~~~~~~--------~~~~~i~gra~D~k~g~a~ 189 (353)
T 1y0y_A 143 IGAESKE-------------------------EAEDMGVKIGTVITWDGRLER--------LGKHRFVSIAFDDRIAVYT 189 (353)
T ss_dssp CSCSSHH-------------------------HHHHTTCCTTCEEEECCCCEE--------ETTTEEEETTHHHHHHHHH
T ss_pred eCCCCHH-------------------------HHHHcCCCCCCEEEeccCcEE--------ecCCeEEeccCccHHHHHH
Confidence 9986542 678899999999999976543 3578999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHhhhcccceEEEEec
Q 011000 288 GLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADM 367 (496)
Q Consensus 288 ~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~~~l~~S~~iS~Dv 367 (496)
+++++..+.. .....+++|+++||+|++|++.+... +.++++|++|+
T Consensus 190 ~l~a~~~l~~-------~~~~i~~~~~~~EE~g~~G~~~~~~~--------------------------~~~~~~i~~d~ 236 (353)
T 1y0y_A 190 ILEVAKQLKD-------AKADVYFVATVQEEVGLRGARTSAFG--------------------------IEPDYGFAIDV 236 (353)
T ss_dssp HHHHHHHCCS-------CSSEEEEEEESCCTTTSHHHHHHHHH--------------------------HCCSEEEEEEE
T ss_pred HHHHHHHhhc-------CCCeEEEEEECCcccchhHHHHHhhc--------------------------cCCCEEEEEec
Confidence 9999988742 24468899999999999988765311 34579999999
Q ss_pred CCCC-CCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCC
Q 011000 368 AHGV-HPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVG 446 (496)
Q Consensus 368 ahA~-~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~G 446 (496)
+++. +|.+. +..+.+.||+||+|+++++ ++..+..+.+.++++|++.|+|+|.... .+||++.++++.++.|
T Consensus 237 ~~~~~~p~~~---~~~g~~~lg~G~~i~~~d~-~~~~~~~l~~~l~~~a~~~gi~~~~~~~---~~ggsDa~~~~~~~~G 309 (353)
T 1y0y_A 237 TIAADIPGTP---EHKQVTHLGKGTAIKIMDR-SVICHPTIVRWLEELAKKHEIPYQLEIL---LGGGTDAGAIHLTKAG 309 (353)
T ss_dssp EECCCSTTCC---GGGCCCCTTSCEEEEEEET-TEECCHHHHHHHHHHHHHTTCCEEEEEC---SSCCCTHHHHTTSTTC
T ss_pred ccccCCCCCc---cccCccccCCCcEEEEeCC-CCCCCHHHHHHHHHHHHHcCCCEEEeec---CCCCchHHHHHHhCCC
Confidence 9976 67764 2345689999999999776 4788999999999999999999998553 2455556777777789
Q ss_pred CcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHhhccc
Q 011000 447 IRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSS 487 (496)
Q Consensus 447 i~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~~~~ 487 (496)
|||+++|+|.++|||+.|.++.+|++.+++++.+|+..+..
T Consensus 310 iPtv~lg~~~~~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 310 VPTGALSVPARYIHSNTEVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp CCEEEEEEEEBSCSSSCEEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred CcEEEEcccccccCCHHHhcCHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999998754
No 12
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=1.7e-40 Score=340.21 Aligned_cols=309 Identities=14% Similarity=0.067 Sum_probs=242.4
Q ss_pred HHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCceeeeeCCCCCCCc
Q 011000 76 HATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSG 155 (496)
Q Consensus 76 h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl~VKpi~~~~~~G 155 (496)
.+.+++++.|++.|++ +++|+.| |++|+..|.. .+.+|++||||+|+|+||++.+ +|
T Consensus 24 ~~~~~l~~~l~~~g~~---------------v~~d~~g-nlia~~~g~~----~~~vll~aH~DtV~~~v~~i~~---~G 80 (348)
T 1ylo_A 24 EVRQILLEEAARLQKE---------------VRFDGLG-SVLIRLNEST----GPKVMICAHMDEVGFMVRSISR---EG 80 (348)
T ss_dssp HHHHHHHHHHHHTTCC---------------EEECTTC-CEEEECCCCS----SCEEEEEEECCCCEEEEEEECT---TC
T ss_pred HHHHHHHHHHHhhCCE---------------EEEecCC-CEEEEecCCC----CceEEEEEcCCccceEEEEECC---CC
Confidence 4678888888887763 4567778 8998865542 3579999999999999999754 69
Q ss_pred EEEEEcCCCc----E--EEEEEEcCCCeEEcCCCCcccccccccCCCCCCCccceeeeeeccCCcccCCccccCCCCCCc
Q 011000 156 RVIVRGSDGS----F--LHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSK 229 (496)
Q Consensus 156 ~V~~~~~~G~----~--~~~lv~~~~pv~vIp~laiHL~~~~~~~~~~~n~~~~L~~diG~~~~~~~~~~~~~~~~~~~~ 229 (496)
++.+.+.+|- + .+..+..++ +.++||+. +.+ .+.+++++|++|+|..+++
T Consensus 81 ~~~~~~~Gg~~~~~~~g~~v~~~~~~-----G~~~~h~~-~~~---~~~~~~~~l~id~G~~s~~--------------- 136 (348)
T 1ylo_A 81 AIDVLPVGNVRMAARQLQPVRITTRE-----ECKIPGLL-DGD---RQGNDVSAMRVDIGARTYD--------------- 136 (348)
T ss_dssp CEEEEEESCCCGGGSSSEEEEEECTT-----CCEEEEEE-EEE---EETTEEEEEEEECSCCSHH---------------
T ss_pred eEEEEecCCcchhhccCCEEEEEeCC-----CCCCcchh-hhh---ccCCChhHEEEEecCCCHH---------------
Confidence 8887765431 0 111222211 16899998 433 2467789999999976432
Q ss_pred cCChhHHHHHHHHHcCCCCCceeEEeeeeeecCCccccCCCCCeeeccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceE
Q 011000 230 VTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIR 309 (496)
Q Consensus 230 ~~h~~~ll~~~a~~~gV~~gDiv~~dl~~~d~~~~~~~Gl~~e~I~s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~ 309 (496)
+++++||++||+++++..+.. +.++++.|+++|||.||+++++++..+... ..+...
T Consensus 137 ----------~~~~~gi~~g~~i~~~~~~~~--------~~~~~~~~~~~D~k~g~aa~l~al~~l~~~-----~~~~~~ 193 (348)
T 1ylo_A 137 ----------EVMQAGIRPGDRVTFDTTFQV--------LPHQRVMGKAFDDRLSCYLLVTLLRELHDA-----ELPAEV 193 (348)
T ss_dssp ----------HHHHTTCCTTCEEEECCCCEE--------ETTTEEEETTHHHHHHHHHHHHHHHHHTTC-----CCSSEE
T ss_pred ----------HHHHcCCCCCCEEEEccccEE--------ecCCEEEecCcccHHHHHHHHHHHHHhhhc-----CCCceE
Confidence 567899999999999975533 247899999999999999999999987532 123467
Q ss_pred EEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCC
Q 011000 310 MVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQK 389 (496)
Q Consensus 310 ~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~ 389 (496)
++++|++||+|++|++++.+. +.++++|++|++|+.+ +++.. ..+.+.+|+
T Consensus 194 ~~~~t~~EEvG~~Ga~~~~~~--------------------------i~~~~~i~~D~~~~~~--~~~~~-~~~~~~~~~ 244 (348)
T 1ylo_A 194 WLVASSSEEVGLRGGQTATRA--------------------------VSPDVAIVLDTACWAK--NFDYG-AANHRQIGN 244 (348)
T ss_dssp EEEEESCCTTSSHHHHHHHHH--------------------------HCCSEEEEECCCCCSS--TTCCS-TTCCCCTTS
T ss_pred EEEEEcccccchhHHHHhhcc--------------------------cCCCEEEEEeccccCC--CCCCC-ccccccCCC
Confidence 889999999999999887543 3446899999999975 44432 245688999
Q ss_pred CcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHH
Q 011000 390 GLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTE 469 (496)
Q Consensus 390 GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~ 469 (496)
||+|+++++ ++.+|+.+.+.++++|++.|||+|.++. .+||++++.++.++.||||+++|+|+++|||++|+++.+
T Consensus 245 G~~i~~~~~-~~~~~~~l~~~~~~~a~~~gi~~~~~~~---~~ggsDa~~~~~~~~gipt~~lg~~~~~~Hs~~E~~~~~ 320 (348)
T 1ylo_A 245 GPMLVLSDK-SLIAPPKLTAWIETVAAEIGVPLQADMF---SNGGTDGGAVHLTGTGVPTLVMGPATRHGHCAASIADCR 320 (348)
T ss_dssp CCEEEEECS-SCBCCHHHHHHHHHHHHHHTCCCEEEEC---SSCCCHHHHHHTSTTCCCEEEEECCCBSCSSSCEEEEHH
T ss_pred CcEEEEeCC-CCCCCHHHHHHHHHHHHHcCCCeEEeec---CCCcchHHHHHHhcCCCCEEEECcccCcCCCcceEeeHH
Confidence 999999876 4889999999999999999999999764 244555677777889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccc
Q 011000 470 DIDIAYRHFKAFYESFSS 487 (496)
Q Consensus 470 Dv~~~~~l~~af~~~~~~ 487 (496)
|++.+++++.+|++.+..
T Consensus 321 d~~~~~~ll~~~~~~l~~ 338 (348)
T 1ylo_A 321 DILQMEQLLSALIQRLTR 338 (348)
T ss_dssp HHHHHHHHHHHHHHTCCH
T ss_pred HHHHHHHHHHHHHHHhhH
Confidence 999999999999998753
No 13
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=1.7e-39 Score=337.21 Aligned_cols=332 Identities=16% Similarity=0.114 Sum_probs=254.9
Q ss_pred HHHHHHh-cCCC--hHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEecc
Q 011000 63 DLLDYLN-ESWT--PFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTD 139 (496)
Q Consensus 63 ~~~~Fl~-~s~T--~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~D 139 (496)
.|.++++ .||| +-.+.+++++.|++.|++ +++|+.| |++|+..|+. +.+.+|+.||||
T Consensus 12 ~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~---------------~~~d~~g-nlia~~~g~~---~~~~vll~aH~D 72 (373)
T 1vhe_A 12 MLKDLTDAKGIPGNEREVRQVMKSYIEPFADE---------------VTTDRLG-SLIAKKTGAE---NGPKIMIAGHLD 72 (373)
T ss_dssp HHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSE---------------EEECTTC-CEEEEEESST---TSCEEEEEEECC
T ss_pred HHHHHHcCCCCCCchHHHHHHHHHHHHhhCCE---------------EEEcCCC-cEEEEecCCC---CCceEEEEecCC
Confidence 3444443 3444 334667777777776663 4556777 8999887752 235799999999
Q ss_pred CCceeeeeCCCCCCCcEEEEEcCCCcE------EEEEEEcC-C-CeEEcCCCCcccccccccCCCCCCCccceeeeeecc
Q 011000 140 SPCLKLKPKSASSKSGRVIVRGSDGSF------LHKLVKVK-R-PLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATK 211 (496)
Q Consensus 140 spgl~VKpi~~~~~~G~V~~~~~~G~~------~~~lv~~~-~-pv~vIp~laiHL~~~~~~~~~~~n~~~~L~~diG~~ 211 (496)
+++|+||++.+ +|++.+...||-. .+++|... + ..|+|+.++||+.++.+ ..+.+++++|++|+|+.
T Consensus 73 ~v~~~v~~i~~---~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~--~~~~~~~~~l~id~g~~ 147 (373)
T 1vhe_A 73 EVGFMVTQITD---KGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEA--RKKSVEIKDMFIDIGAS 147 (373)
T ss_dssp CCEEEEEEECT---TSCEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTT--TTSCCCGGGCEEECSCS
T ss_pred cCCEEEEEECC---CCeEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhh--ccCCCChhHeEEEecCC
Confidence 99999999764 7999998776521 13344433 2 36999999999987643 24788899999999986
Q ss_pred CCcccCCccccCCCCCCccCChhHHHHHHHHHcCCCCCceeEEeeeeeecCCccccCCCCCeeeccCCCchhhHHHHHHH
Q 011000 212 SEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRA 291 (496)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~h~~~ll~~~a~~~gV~~gDiv~~dl~~~d~~~~~~~Gl~~e~I~s~~LDNr~~~~~~lea 291 (496)
+++ +++++||.+||++++|..+. ..| ++++|.|+++||+.||++++++
T Consensus 148 s~~-------------------------~~~~~gi~~Gd~v~~~~~~~------~~~-~~~~i~gr~~D~k~g~a~~l~a 195 (373)
T 1vhe_A 148 SRE-------------------------EALEWGVLPGDMIVPHFEFT------VMN-NEKFLLAKAWDNRIGCAIAIDV 195 (373)
T ss_dssp SHH-------------------------HHHHTTCCTTCEEEECCCCE------ECS-STTEEEETTHHHHHHHHHHHHH
T ss_pred CHH-------------------------HHHHcCCCCCCEEEEccccE------Eec-CCCeEEeccCccHHHHHHHHHH
Confidence 542 56789999999999997544 344 6789999999999999999999
Q ss_pred HHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHhhhcccceEEEEecCCCC
Q 011000 292 LIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGV 371 (496)
Q Consensus 292 l~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~~~l~~S~~iS~DvahA~ 371 (496)
+..+... . .+..++++|+++||+|++|++.+... +..+++|++|.+++.
T Consensus 196 ~~~l~~~--~---~~~~v~~~~~~~EE~G~~G~~~~~~~--------------------------~~~d~~i~~d~~~~~ 244 (373)
T 1vhe_A 196 LRNLQNT--D---HPNIVYGVGTVQEEVGLRGAKTAAHT--------------------------IQPDIAFGVDVGIAG 244 (373)
T ss_dssp HHHHHTS--C---CSSEEEEEEESCCTTTSHHHHHHHHH--------------------------HCCSEEEEEEEEECC
T ss_pred HHHHhhc--C---CCceEEEEEECCcccChhhHHHHhcc--------------------------cCCCEEEEEeccccC
Confidence 9887532 1 23568899999999999987765211 345689999999875
Q ss_pred CCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEE
Q 011000 372 HPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVD 451 (496)
Q Consensus 372 ~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tid 451 (496)
+ +++.....+.+.||+||+++++++. +..++.+.+.++++|++.|+|+|.+... +||++.++++.++.|||+++
T Consensus 245 ~--~~g~~~~~~~~~lg~G~~i~~~~~~-~~~~~~l~~~l~~~a~~~gi~~~~~~~~---~ggtDa~~~~~~~~GiPtv~ 318 (373)
T 1vhe_A 245 D--TPGISEKEAQSKMGKGPQIIVYDAS-MVSHKGLRDAVVATAEEAGIPYQFDAIA---GGGTDSGAIHLTANGVPALS 318 (373)
T ss_dssp C--STTCCTTTCCCCTTSCCEEEEEETT-EECCHHHHHHHHHHHHHHTCCCEEEEET---TCCCTHHHHTTSTTCCCEEE
T ss_pred C--CCCCcccccccccCCCceEEEeCCC-CCCCHHHHHHHHHHHHHcCCCeEEecCC---CCCccHHHHHHhCCCCcEEE
Confidence 4 2333233456899999999987764 7889999999999999999999985542 34555667766778999999
Q ss_pred ecccccccccHhhhcCHHHHHHHHHHHHHHHhhccc
Q 011000 452 CGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSS 487 (496)
Q Consensus 452 iGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~~~~ 487 (496)
+|+|.++|||+.|.++.+|++.+++++.+|+..+..
T Consensus 319 lg~~~~~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~ 354 (373)
T 1vhe_A 319 ITIATRYIHTHAAMLHRDDYENAVKLITEVIKKLDR 354 (373)
T ss_dssp EEEEEBSTTSSCEEEEHHHHHHHHHHHHHHHHHCCH
T ss_pred EccccccCCChhheecHHHHHHHHHHHHHHHHHhcH
Confidence 999999999999999999999999999999988754
No 14
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=1.3e-39 Score=334.97 Aligned_cols=322 Identities=15% Similarity=0.075 Sum_probs=218.4
Q ss_pred HHHHHHHHHh-cCCC--hHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEE
Q 011000 60 IVGDLLDYLN-ESWT--PFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAA 136 (496)
Q Consensus 60 ~a~~~~~Fl~-~s~T--~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~A 136 (496)
+.+.|.++++ .||| +-.+.+++++.|++.||+ +.++..| |++|...|+.. .+.+|+.|
T Consensus 8 ~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~---------------~~~d~~g-nl~a~~~g~~~---~~~ill~~ 68 (349)
T 2gre_A 8 TMELIKELVSIPSPSGNTAKIINFIENYVSEWNVE---------------TKRNNKG-ALILTVKGKND---AQHRLLTA 68 (349)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSE---------------EEECSSS-CEEEEECCSEE---EEEEEEEE
T ss_pred HHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhCCE---------------EEEecCC-cEEEEecCCCC---CceEEEEe
Confidence 3444444444 3333 345677788888887774 2223456 78887756421 23599999
Q ss_pred eccCCceeeeeCCCCCCCcEEEEEcCCCcE------EEEEEEc-CC--CeEEcCC--CCcccccccccCCCCCCCcccee
Q 011000 137 HTDSPCLKLKPKSASSKSGRVIVRGSDGSF------LHKLVKV-KR--PLLRVPT--LAIHLDRTVNKDGFKPNLETQLI 205 (496)
Q Consensus 137 H~Dspgl~VKpi~~~~~~G~V~~~~~~G~~------~~~lv~~-~~--pv~vIp~--laiHL~~~~~~~~~~~n~~~~L~ 205 (496)
|||.|||+||++.+ +|++.+.+.||.. .++.+.. ++ +.|+||+ ++||+.++.+ + +.+++++|+
T Consensus 69 H~Dtv~~~v~~i~~---~G~l~~~~~Gg~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~-~--~~~~~~~l~ 142 (349)
T 2gre_A 69 HVDTLGAMVKEIKP---DGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAG-E--AKRDEKNIE 142 (349)
T ss_dssp ECCBCEEEEEEECT---TSCEEEEEESSCCGGGTTTCEEEEECTTSCEEEEEEECC----------------------CE
T ss_pred cccccceeEEEECC---CCeEEEEecCCCccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhc-c--CCCCHHHce
Confidence 99999999999754 7999988765411 1233443 22 5699999 9999987653 3 678899999
Q ss_pred eeeeccCCcccCCccccCCCCCCccCChhHHHHHHHHHcCCCCCceeEEeeeeeecCCccccCCCCCeeeccCCCchhhH
Q 011000 206 PLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASS 285 (496)
Q Consensus 206 ~diG~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~~a~~~gV~~gDiv~~dl~~~d~~~~~~~Gl~~e~I~s~~LDNr~~~ 285 (496)
|+++..... +.+++++||++||+++||+.+.. +++++|.|+++||+.||
T Consensus 143 ~~id~g~~~-----------------------~~~~~~~gi~~gd~v~~~~~~~~--------~~~~~i~gr~~D~k~g~ 191 (349)
T 2gre_A 143 VRIDERVFS-----------------------ADEVRELGIEVGDFVSFDPRVQI--------TESGYIKSRHLDDKVSV 191 (349)
T ss_dssp EEESSCCCS-----------------------HHHHHHTTCCTTCEEEECCCCEE--------CTTSEEEESCCTTHHHH
T ss_pred EEeccCCCC-----------------------HHHHHHcCCCCCCEEEEccccEE--------ccCCeEEEeeccchHHH
Confidence 777643221 12678999999999999987654 35789999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHhhhcccceEEEE
Q 011000 286 YCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSA 365 (496)
Q Consensus 286 ~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~~~l~~S~~iS~ 365 (496)
+++|+++..+... .. ......+++|+++||+|++|++.. . +.++++|++
T Consensus 192 a~~l~a~~~l~~~--~~-~~~~~i~~~~~~~EE~G~~g~~~~--~--------------------------~~~~~~i~~ 240 (349)
T 2gre_A 192 AILLKLIKRLQDE--NV-TLPYTTHFLISNNEEIGYGGNSNI--P--------------------------EETVEYLAV 240 (349)
T ss_dssp HHHHHHHHHHHHH--TC-CCSEEEEEEEESCC----CCCCCC--C--------------------------TTEEEEEEE
T ss_pred HHHHHHHHHHHhc--cC-CCCceEEEEEECcccCCchhhccc--c--------------------------cCCCEEEEE
Confidence 9999998876421 00 124567888999999999988854 1 345799999
Q ss_pred ecCCCC-CCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcC
Q 011000 366 DMAHGV-HPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASG 444 (496)
Q Consensus 366 DvahA~-~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~ 444 (496)
|++++. +|++++ +|+.|+..++ ++.+++.+.+.++++|++.|||+|.++. .+||++.+++..++
T Consensus 241 D~~~~~~~p~~~~-----------~g~~i~~~~~-~~~~~~~l~~~l~~~a~~~gi~~q~~~~---~ggGsDa~~~~~~~ 305 (349)
T 2gre_A 241 DMGALGDGQASDE-----------YTVSICAKDS-SGPYHYALRKHLVELAKTNHIEYKVDIY---PYYGSDASAAIRAG 305 (349)
T ss_dssp CCCCCSCC--CCT-----------TSEEEEEEET-TEECCHHHHHHHHHHHHHHTCCEEEEEC---SCC--------CCS
T ss_pred ecccccCCCCCCC-----------CceEEEEccC-CCCCCHHHHHHHHHHHHHcCCCcEEecc---CCCCccHHHHHHhC
Confidence 999997 577542 5888887755 4778999999999999999999999654 24566678888888
Q ss_pred CCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHhh
Q 011000 445 VGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYES 484 (496)
Q Consensus 445 ~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~ 484 (496)
.||||+.+|+|++|||| +|+++.+|++.+++++.+|+.+
T Consensus 306 ~GiPt~~lg~~~~~~Hs-~E~~~~~dl~~~~~ll~~~l~~ 344 (349)
T 2gre_A 306 FDVKHALIGAGIDSSHA-FERTHESSIAHTEALVYAYVMS 344 (349)
T ss_dssp SSCEEEEEEECCBSTTS-SEEEEHHHHHHHHHHHHHHHHS
T ss_pred CCCcEEEeccCcccccc-ceeccHHHHHHHHHHHHHHHhc
Confidence 99999999999999999 9999999999999999999975
No 15
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=100.00 E-value=3.6e-38 Score=323.08 Aligned_cols=310 Identities=15% Similarity=0.096 Sum_probs=223.3
Q ss_pred HHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCceeeeeCCCCCCCc
Q 011000 76 HATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSG 155 (496)
Q Consensus 76 h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl~VKpi~~~~~~G 155 (496)
.+.+++++.|++.|| ++++|+.| |++|+..|++ +.+.+|+.||||+++++||++.+ +|
T Consensus 19 ~~~~~l~~~l~~~g~---------------~~~~d~~g-nlia~~~g~~---~~~~v~l~aH~D~v~~~v~~i~~---~G 76 (340)
T 2fvg_A 19 KVRDFIKSKIEGLVD---------------NLYTDVLG-NLIALKRGRD---SSKKLLVSAHMDEVGFVVSKIEK---DG 76 (340)
T ss_dssp HHHHHHHHHHGGGSS---------------EEEECTTS-CEEEEECCSE---EEEEEEEEEECCBCEEEEEEECT---TS
T ss_pred HHHHHHHHHHHhhCC---------------EEEEeCCC-cEEEEecCCC---CCceEEEEeccCcCcEEEEEECC---CC
Confidence 466677777776665 35556777 8999876642 12469999999999999999754 79
Q ss_pred EEEEEcCCCc----E--EEEEEEcCCCeEEcCCCCcccccccccCCCCCCCccceeeeeeccCCcccCCccccCCCCCCc
Q 011000 156 RVIVRGSDGS----F--LHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSK 229 (496)
Q Consensus 156 ~V~~~~~~G~----~--~~~lv~~~~pv~vIp~laiHL~~~~~~~~~~~n~~~~L~~diG~~~~~~~~~~~~~~~~~~~~ 229 (496)
++.+.+.+|. + ..+.| . +..|+||+++||+.++++ .+.+++++|++|+|+.+++
T Consensus 77 ~l~~~~~Gg~~~~~~~~~~v~v-~-~~~g~i~~~~~h~~~~~~---~~~~~~~~l~id~g~~s~~--------------- 136 (340)
T 2fvg_A 77 KVSFLPVGGVDPRILPGKVVQV-K-NLKGVIGYRPIHLQRDEE---NTPPRFENLRIDFGFSSAD--------------- 136 (340)
T ss_dssp CEEEEEESCCCGGGCTTCEEEE-T-TEEEEEEECC--------------CCSTTEEEECSCSSHH---------------
T ss_pred EEEEEeeCCcccccccCCEEEE-C-cEEEEEcCCCccccchhh---ccCCCcccEEEEeCCCCHH---------------
Confidence 9998776541 0 12233 2 356999999999987653 3678899999999987643
Q ss_pred cCChhHHHHHHHHHcCCCCCceeEEeeeeeecCCccccCCCCCeeeccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceE
Q 011000 230 VTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIR 309 (496)
Q Consensus 230 ~~h~~~ll~~~a~~~gV~~gDiv~~dl~~~d~~~~~~~Gl~~e~I~s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~ 309 (496)
+++++ |++||++++|..+.. .| ++|.|+++||+.||+++|+++..+. . .....
T Consensus 137 ----------e~~~~-i~~gd~v~~~~~~~~------~~---~~i~gra~D~k~g~a~~l~a~~~l~-~------~~~~i 189 (340)
T 2fvg_A 137 ----------EAKKY-VSIGDYVSFVSDYIE------KN---GRAVGKAFDDRAGCSVLIDVLESGV-S------PAYDT 189 (340)
T ss_dssp ----------HHHTT-CCTTCEEEECCCCEE------ET---TEEEESCHHHHHHHHHHHHHHHTCC-C------CSEEE
T ss_pred ----------HHHhh-CCCCCEEEEccCcee------ec---CEEeeccCccHHHHHHHHHHHHHhh-c------cCCcE
Confidence 45677 999999999975543 32 7899999999999999999998874 1 24568
Q ss_pred EEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHhhhcccceEEEEecCCCC-CCCCCccccCCCCCcCC
Q 011000 310 MVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGV-HPNFSEKHEEHHRPEMQ 388 (496)
Q Consensus 310 ~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~~~l~~S~~iS~DvahA~-~Pn~~~~~~~~~~~~LG 388 (496)
+++++++||+|++|++.+... +.++++|+.|+++.. +|.++. | .+.+.+|
T Consensus 190 ~~~~~~~EE~G~~G~~~~~~~--------------------------~~~~~~i~~d~~~~~~~~G~~~-h--~~~~~~G 240 (340)
T 2fvg_A 190 YFVFTVQEETGLRGSAVVVEQ--------------------------LKPTCAIVVETTTAGDNPELEE-R--KWATHLG 240 (340)
T ss_dssp EEEEECCCC-----CHHHHHH--------------------------HCCSEEEEEEEEEECSCSTTCC-S--SSSCCTT
T ss_pred EEEEEcccccchhhhHHHhhc--------------------------cCCCEEEEEecccCCCCCCCcc-c--cCCcccC
Confidence 899999999999988755321 355799999999886 465542 2 3478999
Q ss_pred CCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCH
Q 011000 389 KGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGT 468 (496)
Q Consensus 389 ~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~ 468 (496)
+|++|+..+.. +..|+.+.+.++++|++.|+|+|..+. .++|++.+++..++.|||++.+|+|.++|||+.|.++.
T Consensus 241 ~g~~i~~~~~~-~~~~~~l~~~l~~~a~~~gi~~~~~~~---~~ggtDa~~~~~~~~GiP~v~~g~~~~~~Hs~~E~v~~ 316 (340)
T 2fvg_A 241 DGPAITFYHRG-YVIPKEIFQTIVDTAKNNDIPFQMKRR---TAGGTDAGRYARTAYGVPAGVISTPARYIHSPNSIIDL 316 (340)
T ss_dssp SCCEECSCCSS-SCCCHHHHHHHHHHHHHTTCCCEECCC---C-------------CCSCEEEEEEEEEESSTTCEEEEH
T ss_pred CCcEEEEeCCC-CCCCHHHHHHHHHHHHHcCCCeEEEec---CCCCccHHHHHhhCCCCcEEEecccccccCChhhcccH
Confidence 99999988764 778999999999999999999998532 23455566777777999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccc
Q 011000 469 EDIDIAYRHFKAFYESFSS 487 (496)
Q Consensus 469 ~Dv~~~~~l~~af~~~~~~ 487 (496)
+|++.+++++.+|+..+..
T Consensus 317 ~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 317 NDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp HHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 9999999999999988754
No 16
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=100.00 E-value=1.4e-36 Score=309.96 Aligned_cols=303 Identities=18% Similarity=0.076 Sum_probs=235.4
Q ss_pred hHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCceeeeeCCCCCC
Q 011000 74 PFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSK 153 (496)
Q Consensus 74 ~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl~VKpi~~~~~ 153 (496)
+-.+.+++++.|++.|| .. +|..| |++|+..|+ .+.+|+.||||++|++||++.+
T Consensus 21 e~~~~~~l~~~l~~~g~--~~--------------~d~~g-nlia~~~~~-----~~~i~l~aH~D~v~~~v~~i~~--- 75 (332)
T 2wyr_A 21 EERIREEIIREIKDFAD--YK--------------VDAIG-NLIVELGEG-----EERILFMAHMDEIGLLITGITD--- 75 (332)
T ss_dssp CHHHHHHHHHHHTTTCC--CE--------------ECTTC-CEEEEEESS-----SEEEEEEEECCBCEEEEEEECT---
T ss_pred HHHHHHHHHHHHhhcCc--EE--------------EcCCC-eEEEEecCC-----CceEEEEeccCcccEEEEEECC---
Confidence 44577888888888887 21 13556 899987662 2469999999999999998764
Q ss_pred CcEEEEEcCCCcE------EEEEEEc-CCC-eEEcCCCCcccccccccCCCCCCCccceeeeeeccCCcccCCccccCCC
Q 011000 154 SGRVIVRGSDGSF------LHKLVKV-KRP-LLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSST 225 (496)
Q Consensus 154 ~G~V~~~~~~G~~------~~~lv~~-~~p-v~vIp~laiHL~~~~~~~~~~~n~~~~L~~diG~~~~~~~~~~~~~~~~ 225 (496)
+|++.+.+.+|.. .+++|.. +++ .|+|+.++||+.++++ .+.+++++|++|+|+.+++
T Consensus 76 ~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~---~~~~~~~~~~id~g~~~~~----------- 141 (332)
T 2wyr_A 76 EGKLRFRKVGGIDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERD---KSVIPWYDLVIDIGAESKE----------- 141 (332)
T ss_dssp TSCEEEEEESCCCGGGTTTEEEEEECSSCEEEEEECCCCTTC--------CCCCCGGGCCBBCSCSSHH-----------
T ss_pred CCeEEEEecCCcChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhh---ccCCChHHEEEEeCCCCHH-----------
Confidence 7999987665410 1334544 334 5999999999985443 3678899999999987643
Q ss_pred CCCccCChhHHHHHHHHHcCCCCCceeEEeeeeeecCCccccCCCCCeeeccCCCchhhHHHHHHHHHHcCCCCCCCCCC
Q 011000 226 SSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSE 305 (496)
Q Consensus 226 ~~~~~~h~~~ll~~~a~~~gV~~gDiv~~dl~~~d~~~~~~~Gl~~e~I~s~~LDNr~~~~~~leal~~~~~~~~~l~~~ 305 (496)
+++++ |++||++++|..+.. +++++|.|+++||+.||+++++++..+... . .
T Consensus 142 --------------~~~~~-i~~Gd~~~~~~~~~~--------~~~~~i~gra~D~k~g~a~~l~a~~~l~~~--~---~ 193 (332)
T 2wyr_A 142 --------------EALEL-VKPLDFAVFKKHFSV--------LNGKYVSTRGLDDRFGVVALIEAIKDLVDH--E---L 193 (332)
T ss_dssp --------------HHHHH-CCTTCEEEECCCCEE--------ETTTEEECTTHHHHHHHHHHHHHHHTTTTS--C---C
T ss_pred --------------HHHhh-CCCCCEEEEccccEE--------ecCCeEEcccCCcHHHHHHHHHHHHHHhhc--C---C
Confidence 56678 999999999964432 357899999999999999999999887542 1 2
Q ss_pred CceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHhhhcccceEEEEecCCCCC-CCCCccccCCCC
Q 011000 306 HAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVH-PNFSEKHEEHHR 384 (496)
Q Consensus 306 ~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~~~l~~S~~iS~DvahA~~-Pn~~~~~~~~~~ 384 (496)
+...+++|+++||+|++|++.+... +.++++|++|.+++.+ |. +.
T Consensus 194 ~~~i~~~~~~~EE~G~~G~~~~~~~--------------------------~~~~~~i~~d~~~~~~~p~--------~~ 239 (332)
T 2wyr_A 194 EGKVIFAFTVQEEVGLKGAKFLANH--------------------------YYPQYAFAIDSFACCSPLT--------GD 239 (332)
T ss_dssp SSEEEEEEESCGGGTSHHHHHHTTT--------------------------CCCSEEEEECCEECCSGGG--------TT
T ss_pred CceEEEEEECccccCcchHHHHhcc--------------------------cCCCEEEEEecccccCCCC--------Cc
Confidence 3568889999999999988766533 3456999999998763 32 35
Q ss_pred CcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHhh
Q 011000 385 PEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVRE 464 (496)
Q Consensus 385 ~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE 464 (496)
+.||+|+.|++.+.. +..+..+.+.++++|++.|+|+|.... + |+|.+..++. ||||+++|+|.++|||+.|
T Consensus 240 ~~lg~G~~i~~~d~~-~~~~~~l~~~l~~~~~~~gi~~~~~~~----~-ggtDa~~~~~--GiPtv~lg~~~~~~Hs~~E 311 (332)
T 2wyr_A 240 VKLGKGPVIRAVDNS-AIYSRDLARKVWSIAEKNGIEIQIGVT----G-GGTDASAFQD--RSKTLALSVPIKYLHSEVE 311 (332)
T ss_dssp CCTTSCCEEEEECSS-CBCCHHHHHHHHHHHHHTTCCCEEEEC----S-SCCGGGGGTT--TSEEEEEECEEBSCSSTTC
T ss_pred eeeCCCCEEEEcCCC-CCCCHHHHHHHHHHHHHcCCCeEEecC----C-CCchHHHHHc--CCCEEEEcCCcCCCCChhh
Confidence 789999999987764 778999999999999999999998764 3 5554433333 9999999999999999999
Q ss_pred hcCHHHHHHHHHHHHHHHhhc
Q 011000 465 ICGTEDIDIAYRHFKAFYESF 485 (496)
Q Consensus 465 ~~~~~Dv~~~~~l~~af~~~~ 485 (496)
.++.+|++.+++++.+|+.++
T Consensus 312 ~v~~~dl~~~~~ll~~~~~~l 332 (332)
T 2wyr_A 312 TLHLNDLEKLVKLIEALAFEL 332 (332)
T ss_dssp EEEHHHHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHHHHHHHHHhC
Confidence 999999999999999998753
No 17
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=1e-36 Score=310.60 Aligned_cols=278 Identities=14% Similarity=0.037 Sum_probs=208.1
Q ss_pred HHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCceeeeeCCCCCCCc
Q 011000 76 HATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSG 155 (496)
Q Consensus 76 h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl~VKpi~~~~~~G 155 (496)
.+.+++++.|++.|++. . .+. ..+.-...| |++|+..| . +.+|+.||||++||+++++.+
T Consensus 38 ~v~~~l~~~l~~~g~~v-~-~d~------~~~~~~~~g-nlia~~~g-~-----~~ill~aH~DtV~~~v~~i~~----- 97 (321)
T 3cpx_A 38 PLKDFILEYIRSNAGSW-S-YQP------VIYADNDLQ-DCIVLVFG-N-----PRTAVFAHMDSIGFTVSYNNH----- 97 (321)
T ss_dssp HHHHHHHHHHHHHGGGS-S-SCC------EEECSGGGT-TCEEEEES-S-----CSEEEEEECCBCEEEECSTTB-----
T ss_pred HHHHHHHHHHHhhCCeE-E-Ecc------ccccccCCc-cEEEEecC-C-----ceEEEEecCCcCCeEecccCC-----
Confidence 46788999999999852 1 111 011111246 89998755 2 359999999999999998764
Q ss_pred EEEEEcCCCc--E--EEEEEEc-CC-CeEEcCCCCcccccccccCCCCCCCccceeeeeeccCCcccCCccccCCCCCCc
Q 011000 156 RVIVRGSDGS--F--LHKLVKV-KR-PLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSK 229 (496)
Q Consensus 156 ~V~~~~~~G~--~--~~~lv~~-~~-pv~vIp~laiHL~~~~~~~~~~~n~~~~L~~diG~~~~~~~~~~~~~~~~~~~~ 229 (496)
+...+|. + .+.++.. ++ ..++|.+ + + ++++++ .
T Consensus 98 ---~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~------~--e---------e~~~id----a----------------- 136 (321)
T 3cpx_A 98 ---LHPIGSPSAKEGYRLVGKDSNGDIEGVLKI------V--D---------EEWMLE----T----------------- 136 (321)
T ss_dssp ---EEEESSCCCCTTCEEEEEETTEEEEEEEEC------G--G---------GSCEEE----C-----------------
T ss_pred ---eEEcCChhhcccCEEEEEeCCCceeeeECC------c--c---------HHHHHH----H-----------------
Confidence 1111220 0 0122322 21 2355532 1 1 145666 1
Q ss_pred cCChhHHHHHHHHHcCCCCCceeEEeeeeeecCCccccCCCCCeeeccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceE
Q 011000 230 VTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIR 309 (496)
Q Consensus 230 ~~h~~~ll~~~a~~~gV~~gDiv~~dl~~~d~~~~~~~Gl~~e~I~s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~ 309 (496)
+++ |++||+++++..+. .. + +++.|+++|||.||+++++++..+. . .
T Consensus 137 ------------~~l-v~~Gd~v~~~~~~~------~~--~-g~i~~~~~D~k~G~aa~l~al~~l~----------~-i 183 (321)
T 3cpx_A 137 ------------DRL-IDRGTEVTFKPDFR------EE--G-DFILTPYLDDRLGVWTALELAKTLE----------H-G 183 (321)
T ss_dssp ------------SSC-CCTTCEEEECCCCE------EE--T-TEEECTTHHHHHHHHHHHHHTTTCC----------S-E
T ss_pred ------------Hhc-CCCCCEEEeccCcE------EE--c-CEEEEcCCcCHHHHHHHHHHHHHhc----------C-c
Confidence 136 89999999997443 23 3 7999999999999999999986541 2 6
Q ss_pred EEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCC
Q 011000 310 MVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQK 389 (496)
Q Consensus 310 ~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~ 389 (496)
+++|++|||||++|+++|++.+. +.+.++++|++|++++.| .+.+|+
T Consensus 184 ~~~~t~~EEvG~~Ga~~a~~~~~----------------------~~~~~~~~i~~D~~~~~~-----------~~~~~~ 230 (321)
T 3cpx_A 184 IIAFTCWEEHGGGSVAYLARWIY----------------------ETFHVKQSLICDITWVTE-----------GVEAGK 230 (321)
T ss_dssp EEEEESSTTTTCCSHHHHHHHHH----------------------HHHCCCEEEECCCEECCS-----------SSCTTS
T ss_pred EEEEECCccCchhcchhhhhccc----------------------cccCCCEEEEEeCccccC-----------CcccCC
Confidence 78999999999999998764221 225778999999999876 247899
Q ss_pred CcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHH
Q 011000 390 GLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTE 469 (496)
Q Consensus 390 GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~ 469 (496)
||+|++++ ++.+|..+.++++++|+++|||+|.++. .+||+|+++++.++.||||+++|+|++||||++|+++++
T Consensus 231 G~~i~~~~--~~~~~~~l~~~~~~~a~~~gi~~q~~~~---~~GGsD~~~~~~s~~Gipt~~lG~~~~~~Hs~~E~~~~~ 305 (321)
T 3cpx_A 231 GVAISMRD--RMIPRKKYVNRIIELARQTDIPFQLEVE---GAGASDGRELQLSPYPWDWCFIGAPEKDAHTPNECVHKK 305 (321)
T ss_dssp CEEEEEES--SSCCCHHHHHHHHHHHTTSSCCEEEEEC---SSCCCHHHHHHHSSSCCBCCBEECEEBSTTSTTCEEEHH
T ss_pred CcEEEECC--CCCCCHHHHHHHHHHHHHcCCCEEEEeC---CCCCccHHHHHHhCCCCCEEEEchhhcccchhhhheeHH
Confidence 99999997 7999999999999999999999999764 256666788888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhc
Q 011000 470 DIDIAYRHFKAFYESF 485 (496)
Q Consensus 470 Dv~~~~~l~~af~~~~ 485 (496)
|++.+++|+.+|++++
T Consensus 306 dl~~~~~ll~~~~~~l 321 (321)
T 3cpx_A 306 DIESMVGLYKYLMEKL 321 (321)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999999764
No 18
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.92 E-value=8.8e-24 Score=208.69 Aligned_cols=329 Identities=19% Similarity=0.145 Sum_probs=227.6
Q ss_pred HHHHHHHHHHhcCCChHH--H-HHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEE
Q 011000 59 SIVGDLLDYLNESWTPFH--A-TAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIA 135 (496)
Q Consensus 59 ~~a~~~~~Fl~~s~T~~h--~-v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~ 135 (496)
++-++|++. .|||.+. . .+++++.|++.||+ +++|+.| ||+|...|+ .+.+|+.
T Consensus 13 elL~~Lv~i--pS~sg~E~~~v~~~l~~~l~~~G~~---------------v~~D~~G-Nlia~~~g~-----~p~lll~ 69 (354)
T 2wzn_A 13 KLMQEIIEA--PGVSGYEHLGIRDIVVDVLKEVADE---------------VKVDKLG-NVIAHFKGS-----SPRIMVA 69 (354)
T ss_dssp HHHHHHHHS--CCBTTCGGGTHHHHHHHHHHTTSSE---------------EEECTTC-CEEEEECCS-----SSEEEEE
T ss_pred HHHHHHhcC--CCCCcchHHHHHHHHHHHHHHcCCE---------------EEEeCCC-eEEEEECCC-----CceEEEE
Confidence 455555443 4556553 3 46788888888864 3456677 899876443 2369999
Q ss_pred EeccCCceeeeeCCCCCCCcEEEEEcCCCc------EEEEEE-EcC-CCeEEcCCCCcccccccccCCCCCCCccceeee
Q 011000 136 AHTDSPCLKLKPKSASSKSGRVIVRGSDGS------FLHKLV-KVK-RPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPL 207 (496)
Q Consensus 136 AH~Dspgl~VKpi~~~~~~G~V~~~~~~G~------~~~~lv-~~~-~pv~vIp~laiHL~~~~~~~~~~~n~~~~L~~d 207 (496)
||||++++.++++.+ +|++.....++. .....+ ... .+...+..+..+-..... .+.+....+.++++
T Consensus 70 ~H~Dtvp~~v~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~-~~~~~~~~~~~~~~ 145 (354)
T 2wzn_A 70 AHMDKIGVMVNHIDK---DGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQE-DKGSKIDWDQIVVD 145 (354)
T ss_dssp EECCBCEEEEEEECT---TSCEEEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCGGGC----------CCGGGCCEE
T ss_pred eccccCCCcCCeeec---CCceeeccCCCccHHHHHHHHHHHhhccCCccceEEEeeeeeEeccc-ccccchhhhhhhhh
Confidence 999999999998764 677776544321 011112 222 233333333333322211 12234455788888
Q ss_pred eeccCCcccCCccccCCCCCCccCChhHHHHHHHHHcCCCCCceeEEeeeeeecCCccccCCCCCeeeccCCCchhhHHH
Q 011000 208 LATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYC 287 (496)
Q Consensus 208 iG~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~~a~~~gV~~gDiv~~dl~~~d~~~~~~~Gl~~e~I~s~~LDNr~~~~~ 287 (496)
+|..+.+ .....++..+..+.+...+.-. ......++++|++.++.+
T Consensus 146 ~g~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 192 (354)
T 2wzn_A 146 VGASSKE-------------------------EAEEMGFRVGTVGEFAPNFTRL--------NEHRFATPYLDDRICLYA 192 (354)
T ss_dssp CSCSSHH-------------------------HHHHTTCCTTCEEEECCCCEEC--------SSSEEECTTHHHHHHHHH
T ss_pred hcccchh-------------------------hhhccccccceeeeeeeeeEee--------cccccccccccccchhhh
Confidence 8876532 4457788899988877665442 245678899999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHhhhcccceEEEEec
Q 011000 288 GLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADM 367 (496)
Q Consensus 288 ~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~~~l~~S~~iS~Dv 367 (496)
+++++.++.. ........++.++++|..+...+.+. ......+..+.
T Consensus 193 ~~~~~~~l~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~--------------------------~~~~~~~~~~~ 239 (354)
T 2wzn_A 193 MIEAARQLGD-------HEADIYIVGSVQEEVGLRGARVASYA--------------------------INPEVGIAMDV 239 (354)
T ss_dssp HHHHHHHCCC-------CSSEEEEEEESCGGGTSHHHHHHHHH--------------------------HCCSEEEEEEE
T ss_pred HHHHHHHHHh-------ccccccccccceeeeeeecccccccc--------------------------cccccceeeee
Confidence 9999988753 23346778899999998877665432 23346677777
Q ss_pred CCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChH-HHHhcCCC
Q 011000 368 AHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIG-PILASGVG 446 (496)
Q Consensus 368 ahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig-~i~~s~~G 446 (496)
....++.... .....++.|....... ..++.........+...++++|..... .+|||.| .++.++.|
T Consensus 240 ~~~~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ggTDa~~~~~~~~G 308 (354)
T 2wzn_A 240 TFAKQPHDKG----KIVPELGKGPVMDVGP----NINPKLRAFADEVAKKYEIPLQVEPSP---RPTGTDANVMQINKEG 308 (354)
T ss_dssp EECCCTTSTT----CCCCCTTSCCEEEEST----TSCHHHHHHHHHHHHHTTCCCEEEECC---SCCSSHHHHHHTSTTC
T ss_pred eeccccchhh----hhheeecccccccccc----ccCcchhhhhHHHHHHhcCCCceEEEe---cccccHHHHHHHhcCC
Confidence 7776654332 2356788888776543 347788888899999999999987642 3567755 56678899
Q ss_pred CcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHhhccccccc
Q 011000 447 IRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKK 491 (496)
Q Consensus 447 i~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~~~~~~~~ 491 (496)
|||+.+|+|.++|||+.|.++++|++.+++++.+|++++.+++|+
T Consensus 309 iptv~~G~g~~~~Ht~~E~v~i~dl~~~~~ll~~~i~~L~~~d~~ 353 (354)
T 2wzn_A 309 VATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDFT 353 (354)
T ss_dssp CEEEEEEEEEBSTTSTTCEEEHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CCEEEECcccCCCCcccEEEEHHHHHHHHHHHHHHHHhCccccCC
Confidence 999999999999999999999999999999999999999998764
No 19
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.56 E-value=6.4e-15 Score=145.77 Aligned_cols=172 Identities=11% Similarity=0.130 Sum_probs=120.0
Q ss_pred Ceeecc-CCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcc-cccccCCCcHHHHHHHHHhhccCCCCC
Q 011000 272 EFIFSG-RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSD-SYQGAGAPTMFQAIRRIVGSLAHEHVS 349 (496)
Q Consensus 272 e~I~s~-~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~-ga~gA~s~~~~d~l~ri~~~~~~~~~~ 349 (496)
+.+.|+ ..||+.+++++++|+..+.... ...+..++++|+.+||+|++ |+.... +.+.
T Consensus 94 g~~~grG~~D~k~g~a~~l~a~~~l~~~~---~~~~~~i~~~~~~~EE~g~~~Ga~~~~--------~~~~--------- 153 (269)
T 4h2k_A 94 GMLYGRGAADMKGSLAAMIVAAEEYVKAN---PNHKGTIALLITSDEEATAKDGTIHVV--------ETLM--------- 153 (269)
T ss_dssp TEEESTTTTTTHHHHHHHHHHHHHHHHHC---TTCSSEEEEEEESCSSSCCTTSHHHHH--------HHHH---------
T ss_pred CEEEeCCcccChHHHHHHHHHHHHHHHhC---CCCCccEEEEEEeccccCcccCHHHHH--------HHHH---------
Confidence 345554 4899999999999887653210 01245688999999999984 655321 1111
Q ss_pred hhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHH-CCCCEeEEEec
Q 011000 350 ETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKL-HNLPTQEFVVR 428 (496)
Q Consensus 350 ~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~-~~Ip~Q~~~~r 428 (496)
.+....+++|..|.+....+. +. -...+.|.|. +..+..+...+++.|++ .||++|...
T Consensus 154 ----~~~~~~d~~i~~Ept~~~~~~--~~---i~~g~~G~G~---------~~~~~~l~~~l~~aa~~~~gi~~~~~~-- 213 (269)
T 4h2k_A 154 ----ARDEKITYCMVGEPSSAKNLG--DV---VKNGRRGGGF---------LTKPGKLLDSITSAIEETIGITPKAET-- 213 (269)
T ss_dssp ----HTTCCCCEEEECCCCBSSSTT--SE---EECSCTTCC---------------HHHHHHHHHHHHHHSCCCEEEC--
T ss_pred ----hcCCCCCEEEEECCCCCCcCC--ce---eEEecccccc---------cCCCcHHHHHHHHHHHHHhCCCCEEec--
Confidence 112456799999988754321 00 1124567772 12245688999999998 899999754
Q ss_pred cCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHhhccc
Q 011000 429 NDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSS 487 (496)
Q Consensus 429 ~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~~~~ 487 (496)
.||||.+..++ +.|+|++.+|+|.+||||+.|.++.+|++.+++++.++++++.+
T Consensus 214 ---~gggtDa~~~~-~~g~p~~~~~~~~~~~Hs~~E~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 214 ---GGGTSDGRFIA-LMGAEVVEFGPLNSTIHKVNECVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp ---C--CHHHHHHH-TTTCEEEECCSBCTTTTSTTCEEEHHHHHHHHHHHHHHHHHHC-
T ss_pred ---CCCCchHHHHH-hhCCCEEEEEeCCCCCcCCcccccHHHHHHHHHHHHHHHHHHhh
Confidence 36777776666 68999999999999999999999999999999999999987654
No 20
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.44 E-value=1.4e-13 Score=135.94 Aligned_cols=170 Identities=11% Similarity=0.090 Sum_probs=117.4
Q ss_pred Ceeecc-CCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCc-ccccccCCCcHHHHHHHHHhhccCCCCC
Q 011000 272 EFIFSG-RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS-DSYQGAGAPTMFQAIRRIVGSLAHEHVS 349 (496)
Q Consensus 272 e~I~s~-~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs-~ga~gA~s~~~~d~l~ri~~~~~~~~~~ 349 (496)
+++.|+ ..||+.+|+++++|+..+.... . ..+..++++|+.+||+|+ +|+.... +.+.
T Consensus 94 g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~-~~~~~v~~~~~~~EE~g~~~Ga~~~~--------~~~~--------- 153 (268)
T 3t68_A 94 GFLHGRGAADMKGSLACMIVAVERFIAEH--P-DHQGSIGFLITSDEEGPFINGTVRVV--------ETLM--------- 153 (268)
T ss_dssp TEEESTTTTTTHHHHHHHHHHHHHHHHHC--T-TCSSEEEEEEESCTTSSSCCHHHHHH--------HHHH---------
T ss_pred CEEEecCcccchHHHHHHHHHHHHHHHhC--C-CCCCcEEEEEEeCCccCcccCHHHHH--------HHHH---------
Confidence 345554 6899999999999887653210 0 124568899999999998 3654322 1111
Q ss_pred hhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHH-CCCCEeEEEec
Q 011000 350 ETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKL-HNLPTQEFVVR 428 (496)
Q Consensus 350 ~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~-~~Ip~Q~~~~r 428 (496)
.+....+++|..|.+....+. +.. ...+.|. |.+ ..+..+.+.+++.+++ .||++|...
T Consensus 154 ----~~~~~~d~~i~~ept~~~~~~--~~i---~~g~~G~-p~~--------~~~~~l~~~l~~a~~~~~gi~~~~~~-- 213 (268)
T 3t68_A 154 ----ARNELIDMCIVGEPSSTLAVG--DVV---KNGRRGG-GFL--------TDTGELLAAVVAAVEEVNHQAPALLT-- 213 (268)
T ss_dssp ----HTTCCCCEEEECSCCBSSSTT--SEE---EECCGGG-GTS--------CCCCHHHHHHHHHHHHHHSSCCEEES--
T ss_pred ----hcCCCCCEEEEeCCCCCccCC--cee---EEecCCC-ccc--------CCchHHHHHHHHHHHHHhCCCcEEec--
Confidence 112456799999987653221 000 0112222 322 1123578899999998 699999743
Q ss_pred cCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHhhc
Q 011000 429 NDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESF 485 (496)
Q Consensus 429 ~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~~ 485 (496)
.+|||.+..++ +.|+|++.+|+|.++|||+.|.++..|++.+++++.++++++
T Consensus 214 ---sgggtD~~~~~-~~g~p~~~~~~~~~~~Hs~~E~v~~~d~~~~~~vl~~~l~~l 266 (268)
T 3t68_A 214 ---TGGTSDGRFIA-QMGAQVVELGPVNATIHKVNECVRIADLEKLTDMYQKTLNHL 266 (268)
T ss_dssp ---SCCCHHHHHHH-HHTCEEEECCSBCTTTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred ---CccccHHHHHH-hcCCCEEEEeeCCCCCCCccccccHHHHHHHHHHHHHHHHHH
Confidence 35777765555 489999999999999999999999999999999999999765
No 21
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.13 E-value=7.7e-11 Score=118.21 Aligned_cols=167 Identities=10% Similarity=-0.054 Sum_probs=116.4
Q ss_pred eeeccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhh
Q 011000 273 FIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETS 352 (496)
Q Consensus 273 ~I~s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~ 352 (496)
.+..++.||+.||.++|+++..+.... . .....++++++++||+|+.|++.....+.+.
T Consensus 110 ~~~~Ga~D~~~g~a~~l~~~~~l~~~~--~-~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~------------------ 168 (299)
T 1rtq_A 110 SVAPGADDDASGIAAVTEVIRVLSENN--F-QPKRSIAFMAYAAEEVGLRGSQDLANQYKSE------------------ 168 (299)
T ss_dssp CCCCCTTTTHHHHHHHHHHHHHHHHTT--C-CCSEEEEEEEESCGGGTSHHHHHHHHHHHHT------------------
T ss_pred cccCCCcccHHHHHHHHHHHHHHHHcC--C-CCCceEEEEEECCccCCchhHHHHHHhhhhc------------------
Confidence 456788999999999999988764321 1 1345788999999999998876432221110
Q ss_pred HhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHC--CCCEeEEEeccC
Q 011000 353 FECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLH--NLPTQEFVVRND 430 (496)
Q Consensus 353 ~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~--~Ip~Q~~~~r~D 430 (496)
...-..+|.+|+..+. |.|..+.+... .+++.+..++++++++. +|++|....
T Consensus 169 ---~~~~~~~i~~D~~g~~----------------g~~~~i~~~~~---~~~~~l~~~l~~~a~~~~~~i~~~~~~~--- 223 (299)
T 1rtq_A 169 ---GKNVVSALQLDMTNYK----------------GSAQDVVFITD---YTDSNFTQYLTQLMDEYLPSLTYGFDTC--- 223 (299)
T ss_dssp ---TCEEEEEEECSCCSCC----------------CSSSSEEEECT---TSCHHHHHHHHHHHHHHCTTCCEEEECC---
T ss_pred ---cccEEEEEEecCCCCC----------------CCCcceEEEeC---CCCchHHHHHHHHHHHhCccCCcccCCC---
Confidence 0122378889986531 12222333221 14778888999999988 899996432
Q ss_pred CCCCCChHHHHhcCCCCcEEEecc-----cccccccHhhhcCHHHH-----HHHHHHHHHHHhhccc
Q 011000 431 MGCGSTIGPILASGVGIRTVDCGI-----AQLSMHSVREICGTEDI-----DIAYRHFKAFYESFSS 487 (496)
Q Consensus 431 ~~gG~Tig~i~~s~~Gi~tidiGi-----P~l~MHS~rE~~~~~Dv-----~~~~~l~~af~~~~~~ 487 (496)
..+||+..++. +.|||++.+.. |.+|+||+.++++..|. ..+.+++.+|+..+..
T Consensus 224 ~~~~sD~~~f~--~~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l~~~~~~~La~ 288 (299)
T 1rtq_A 224 GYACSDHASWH--NAGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGS 288 (299)
T ss_dssp SSCCSTHHHHH--HTTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHH--HCCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHHHHHHHHHHhC
Confidence 12345567774 47999998766 77999999999999997 8889999999887654
No 22
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.08 E-value=2.1e-10 Score=114.28 Aligned_cols=159 Identities=18% Similarity=0.056 Sum_probs=112.9
Q ss_pred CCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHhhhc
Q 011000 278 RLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTI 357 (496)
Q Consensus 278 ~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~~~l 357 (496)
+.||+.||.++|+++..+..... .....++++|+++||+|+.|++.....+.++.+ -
T Consensus 95 a~D~~~g~a~~l~~~~~l~~~~~---~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~--------------------~ 151 (284)
T 1tkj_A 95 INDNGSGSAAVLETALAVSRAGY---QPDKHLRFAWWGAEELGLIGSKFYVNNLPSADR--------------------S 151 (284)
T ss_dssp TTTTHHHHHHHHHHHHHHHHTTC---CCSEEEEEEEESCGGGTSHHHHHHHHHSCHHHH--------------------T
T ss_pred CccChHHHHHHHHHHHHHHhcCC---CCCceEEEEEECCcccCCcCHHHHHhhCccchh--------------------h
Confidence 58999999999998887643210 134578899999999998877644332222110 0
Q ss_pred ccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCCh
Q 011000 358 RQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTI 437 (496)
Q Consensus 358 ~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Ti 437 (496)
.-..+|.+|+....++ |..+ +..++.+...+++++++.||++|.... ..++++-
T Consensus 152 ~~~~~i~~D~~g~~~~----------------~~~~-------~~~~~~l~~~~~~~~~~~gi~~~~~~~---~~~~sD~ 205 (284)
T 1tkj_A 152 KLAGYLNFDMIGSPNP----------------GYFV-------YDDDPVIEKTFKNYFAGLNVPTEIETE---GDGRSDH 205 (284)
T ss_dssp TEEEEEEECCCCCSSC----------------CCEE-------CCSSHHHHHHHHHHHHHHTCCCEECCS---STTCSTH
T ss_pred cEEEEEEecCCCCCCC----------------CeEE-------ecCCHHHHHHHHHHHHHcCCCcccCCC---CCCCCch
Confidence 1137888998753221 2221 113567788899999999999996432 1234556
Q ss_pred HHHHhcCCCCcEEEeccc---------------------ccccccHhhh---cCHHHHHHHHHHHHHHHhhccc
Q 011000 438 GPILASGVGIRTVDCGIA---------------------QLSMHSVREI---CGTEDIDIAYRHFKAFYESFSS 487 (496)
Q Consensus 438 g~i~~s~~Gi~tidiGiP---------------------~l~MHS~rE~---~~~~Dv~~~~~l~~af~~~~~~ 487 (496)
.++. +.|||++.++.+ .+++||+..+ ++..|+....+++.+++..+..
T Consensus 206 ~~f~--~~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~la~ 277 (284)
T 1tkj_A 206 APFK--NVGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSS 277 (284)
T ss_dssp HHHH--HTTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHH--HCCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 7776 489999999988 6899999998 9999999999999999887654
No 23
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=98.87 E-value=3.7e-09 Score=110.18 Aligned_cols=80 Identities=13% Similarity=0.036 Sum_probs=68.5
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHH
Q 011000 403 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 482 (496)
Q Consensus 403 t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~ 482 (496)
.|..+.+.+++++++.|+++|... .+|||.+.+++. .|+|++.+|++..++||+.|.++.+|+..+++++..++
T Consensus 328 ~~~~l~~~~~~~~~~~g~~~~~~~-----~~ggtD~~~~~~-~gip~v~~G~~~~~~H~~~E~i~~~~l~~~~~~~~~~~ 401 (417)
T 1fno_A 328 EHPHILDIAQQAMRDCHITPEMKP-----IRGGTDGAQLSF-MGLPCPNLFTGGYNYHGKHEFVTLEGMEKAVQVIVRIA 401 (417)
T ss_dssp TSTHHHHHHHHHHHHTTCCCBCCC-----BSSCCHHHHHTT-TTCCCCEECCSEESTTSTTCEEEHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCCceecc-----ceeccchHhHHh-cCCCEEEEcCCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 577888999999999999987533 367887766654 69999999999999999999999999999999999999
Q ss_pred hhcccc
Q 011000 483 ESFSSI 488 (496)
Q Consensus 483 ~~~~~~ 488 (496)
..+...
T Consensus 402 ~~~~~~ 407 (417)
T 1fno_A 402 ELTAKR 407 (417)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 887653
No 24
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=98.82 E-value=2.7e-07 Score=96.72 Aligned_cols=79 Identities=16% Similarity=0.077 Sum_probs=66.0
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHH
Q 011000 403 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 482 (496)
Q Consensus 403 t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~ 482 (496)
.|..+.+.+++++++.|++.+... .+|||.+.+++. .|+|++-+|++...+|++.|.++.+|+...++++..++
T Consensus 354 ~d~~l~~~~~~a~~~~G~~~~~~~-----~~ggtD~~~~~~-~GiP~~~~g~g~~~~H~~~E~i~~~~l~~~~~~~~~~l 427 (434)
T 3ife_A 354 PVREIVDIAYEAMKSLNIEPNIHP-----IRGGTDGSQLSY-MGLPTPNIFTGGENYHGKFEYVSVDVMEKAVQVIIEIA 427 (434)
T ss_dssp GGTHHHHHHHHHHHHTTCCCEECC-----BSSCCHHHHHHH-TTCCCCEECCSEESTTSTTCEEEHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEee-----cccCchHHHHhh-CCCcEEEeCCCCCCCcCCceeecHHHHHHHHHHHHHHH
Confidence 466778888888888888765432 367887777665 79999999999999999999999999999999999999
Q ss_pred hhccc
Q 011000 483 ESFSS 487 (496)
Q Consensus 483 ~~~~~ 487 (496)
..+.+
T Consensus 428 ~~la~ 432 (434)
T 3ife_A 428 RRFEE 432 (434)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 88754
No 25
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.68 E-value=1.3e-07 Score=99.14 Aligned_cols=160 Identities=13% Similarity=-0.033 Sum_probs=109.7
Q ss_pred cCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHhhh
Q 011000 277 GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECT 356 (496)
Q Consensus 277 ~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~~~ 356 (496)
++.||..||.++|++++.+... .....+++++|+.||.|+.|++.-...+.++.++++
T Consensus 237 Ga~D~~~G~a~~le~~~~l~~~-----~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~~~----------------- 294 (421)
T 2ek8_A 237 GANDDASGVAVTLELARVMSKL-----KTDTELRFITFGAEENGLIGSKKYAASLSEDEIKRT----------------- 294 (421)
T ss_dssp CTTTTHHHHHHHHHHHHHHTTS-----CCSSEEEEEEESSSTTTSHHHHHHHTTCCHHHHHHE-----------------
T ss_pred CCCCCcHhHHHHHHHHHHHhcc-----CCCceEEEEEECCccccchhHHHHHHhCccchhhcE-----------------
Confidence 7889999999999998877532 134578999999999999988866555444322222
Q ss_pred cccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCC
Q 011000 357 IRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGST 436 (496)
Q Consensus 357 l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~T 436 (496)
..+|.+|+..+ |+++.. ....+.|. + .....+....+++.++| |.... .+||+
T Consensus 295 ---~~~in~D~~g~--~~~~~~-----~~~~~~g~-----------~-~~~~~~~~~~~~~~~~~-~~~~~----~~~SD 347 (421)
T 2ek8_A 295 ---IGMFQLDMVGS--KDAGDL-----IMYTIDGK-----------K-NRVTDLGAAASSRLSGV-LPYGQ----EGRSD 347 (421)
T ss_dssp ---EEEEEECSCCB--TTSCEE-----EEEETTSC-----------C-CHHHHHHHHHHHHHTSC-CCEEE----CCSST
T ss_pred ---EEEEEecccCC--CCCcce-----EEecCCCc-----------c-ccchhhHHHHHHhcCCC-CCCCC----CCCCc
Confidence 26789998775 333110 00111121 1 11223445667777998 54221 35666
Q ss_pred hHHHHhcCCCCcEEEec-ccc-cccccHhhh---cCHHHHHHHHHHHHHHHhhccc
Q 011000 437 IGPILASGVGIRTVDCG-IAQ-LSMHSVREI---CGTEDIDIAYRHFKAFYESFSS 487 (496)
Q Consensus 437 ig~i~~s~~Gi~tidiG-iP~-l~MHS~rE~---~~~~Dv~~~~~l~~af~~~~~~ 487 (496)
..+++ +.|||++.++ .|. +++||+..+ ++..++..+.+++..++..+.+
T Consensus 348 ~~~F~--~~GIP~~~~~~~~~~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~la~ 401 (421)
T 2ek8_A 348 HESFH--ALGIPAALFIHAPVEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAAR 401 (421)
T ss_dssp HHHHH--TTTCCEEEEEEESCCTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHHHS
T ss_pred cHHHH--HCCCCEEEEECCcCCCCCCCcccchhhCCHHHHHHHHHHHHHHHHHHhC
Confidence 77887 5899999886 775 789999998 8999999999999999877654
No 26
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=98.64 E-value=1e-07 Score=97.61 Aligned_cols=77 Identities=17% Similarity=0.148 Sum_probs=67.8
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHH
Q 011000 403 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 482 (496)
Q Consensus 403 t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~ 482 (496)
.|..+.+.+++++++.|+++|... .+|||.+.+++. .|+|++.+|++..++|++.|.++.+|+..+++++..++
T Consensus 295 ~~~~l~~~~~~~~~~~g~~~~~~~-----~~g~~D~~~~~~-~gip~~~~g~~~~~~H~~~E~i~~~~l~~~~~~~~~~l 368 (373)
T 3gb0_A 295 DGDHVVEVAKRAAEKIGRTPSLHQ-----SGGGSDANVIAG-HGIPTVNLAVGYEEIHTTNEKIPVEELAKTAELVVAII 368 (373)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEEE-----CSSCCHHHHHHH-TTCCEEEEECCCBSTTSTTCEEEHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCceEec-----ccCcchHHHHHh-CCCCEEEecCCCCcCcCCceEEEHHHHHHHHHHHHHHH
Confidence 377889999999999999988654 367887766654 69999999999999999999999999999999999999
Q ss_pred hhc
Q 011000 483 ESF 485 (496)
Q Consensus 483 ~~~ 485 (496)
++|
T Consensus 369 ~~l 371 (373)
T 3gb0_A 369 EEV 371 (373)
T ss_dssp HHH
T ss_pred HHh
Confidence 887
No 27
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=98.63 E-value=8e-08 Score=99.44 Aligned_cols=78 Identities=15% Similarity=0.252 Sum_probs=68.2
Q ss_pred CHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHh
Q 011000 404 SGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYE 483 (496)
Q Consensus 404 ~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~ 483 (496)
|..+.+.+++++++.|++++... .+|||.+.+++. .|+|++.+|++..++|++.|.++.+|+..+++++..++.
T Consensus 316 d~~l~~~~~~~~~~~g~~~~~~~-----~~g~tD~~~~~~-~giP~~~~g~g~~~~H~~~E~v~~~~l~~~~~~~~~~~~ 389 (396)
T 3rza_A 316 NEAVVKIAQESARNLGLSANTII-----SGGGSDGSIINT-FGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIK 389 (396)
T ss_dssp TSHHHHHHHHHHHHTTCCCCEEE-----CSSCCHHHHHGG-GTCCEEEEECCCBSTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCceecc-----cceeccHHHHhh-CCCcEEEECCCCCCCCCCcceeEHHHHHHHHHHHHHHHH
Confidence 77888999999999999987654 367887766654 699999999999999999999999999999999999998
Q ss_pred hccc
Q 011000 484 SFSS 487 (496)
Q Consensus 484 ~~~~ 487 (496)
.+.+
T Consensus 390 ~l~~ 393 (396)
T 3rza_A 390 IVAR 393 (396)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 28
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=98.14 E-value=2.2e-06 Score=88.33 Aligned_cols=78 Identities=13% Similarity=-0.044 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEE-Eeccccccccc-HhhhcCHHHHHHHHHHHHHHH
Q 011000 405 GVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTV-DCGIAQLSMHS-VREICGTEDIDIAYRHFKAFY 482 (496)
Q Consensus 405 ~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~ti-diGiP~l~MHS-~rE~~~~~Dv~~~~~l~~af~ 482 (496)
..+.+.+++++++.|++++.... .+|||.+.++.. .|+|++ -+|.+...+|+ +.|.++.+|+...++++..++
T Consensus 312 ~~l~~~~~~~~~~~g~~~~~~~~----~~g~tD~~~~~~-~giP~~~~~G~~~~~~H~~~~E~i~~~~l~~~~~~~~~~~ 386 (393)
T 1cg2_A 312 KKLVDKAVAYYKEAGGTLGVEER----TGGGTDAAYAAL-SGKPVIESLGLPGFGYHSDKAEYVDISAIPRRLYMAARLI 386 (393)
T ss_dssp HHHHHHHHHHHHHTTCCCEEESC----BSCCCTHHHHGG-GSCCEECCCSCEEECTTSSSCCEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCccccC----CCcccHHHHHHh-CCCCEEEeCCCCCCCccCCCcceEEehhHHHHHHHHHHHH
Confidence 56788899999999988765320 257777766654 689999 48988788999 999999999999999999999
Q ss_pred hhccc
Q 011000 483 ESFSS 487 (496)
Q Consensus 483 ~~~~~ 487 (496)
..+.+
T Consensus 387 ~~l~~ 391 (393)
T 1cg2_A 387 MDLGA 391 (393)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 88754
No 29
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=98.02 E-value=2.7e-05 Score=79.35 Aligned_cols=50 Identities=22% Similarity=0.280 Sum_probs=43.1
Q ss_pred CCCChHHHHhcCCCCcEEEecccc-cccccHhhhcCHHHHHHHHHHHHHHHh
Q 011000 433 CGSTIGPILASGVGIRTVDCGIAQ-LSMHSVREICGTEDIDIAYRHFKAFYE 483 (496)
Q Consensus 433 gG~Tig~i~~s~~Gi~tidiGiP~-l~MHS~rE~~~~~Dv~~~~~l~~af~~ 483 (496)
+|+|.+.+++ +.|+|++.+|... ..+|++.|-++.+|+...++++..+++
T Consensus 318 ~ggtD~~~~~-~~giP~~~~Gpg~~~~~H~~~E~v~~~~l~~~~~~l~~~l~ 368 (369)
T 3tx8_A 318 FGWTDVSRFS-AMGIPALNFGAGDPSFAHKRDEQCPVEQITDVAAILKQYLS 368 (369)
T ss_dssp CSCCTHHHHH-TTTCCEEEECSSCSSSSSCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred ccccchHHHh-hCCCCEEEECCCChhhCCCCCcEEEHHHHHHHHHHHHHHhh
Confidence 5677776665 4799999999875 579999999999999999999999875
No 30
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=97.95 E-value=3e-05 Score=80.71 Aligned_cols=80 Identities=15% Similarity=0.153 Sum_probs=63.8
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHH
Q 011000 404 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 482 (496)
Q Consensus 404 ~~~~~~~l~~ia~~-~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~ 482 (496)
|..+...+++.+++ .|++.+... .+|||.+.+++...|+|++.+|.....+|++.|-++.+|+...++++..++
T Consensus 350 d~~~~~~~~~a~~~~~G~~~~~~~-----~~g~~D~~~~~~~~giP~v~~Gp~~~~~H~~~E~i~~~~l~~~~~~~~~~i 424 (433)
T 3pfo_A 350 GGVAEDVLTAAHKAAFNAPLDARL-----STAVNDTRYYSVDYGIPALCYGPYGQGPHAFDERIDLESLRKTTLSIALFV 424 (433)
T ss_dssp TCHHHHHHHHHHHHHHSSCCCEEE-----ESSCCTHHHHHHTTCCCEEECCCCEECTTSTTCEEEHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCceee-----eeeeccHHHHHhhCCCCEEEECCCCccCCCCCceEEHHHHHHHHHHHHHHH
Confidence 45566666666665 688776543 257777766665579999999999899999999999999999999999999
Q ss_pred hhcccc
Q 011000 483 ESFSSI 488 (496)
Q Consensus 483 ~~~~~~ 488 (496)
.+|-..
T Consensus 425 ~~~~~~ 430 (433)
T 3pfo_A 425 AEWCGL 430 (433)
T ss_dssp HHHHCE
T ss_pred HHHhcc
Confidence 887654
No 31
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=97.82 E-value=2e-05 Score=83.34 Aligned_cols=162 Identities=13% Similarity=0.091 Sum_probs=98.7
Q ss_pred cCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHhhh
Q 011000 277 GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECT 356 (496)
Q Consensus 277 ~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~~~ 356 (496)
.+.||..||.++|++++.+...+ . .+...+.+++|+.||.|+.|++--...... .+
T Consensus 266 Ga~D~~sG~a~~le~a~~l~~~~--~-~~~~~i~f~~~~~EE~gl~Gs~~~~~~~~~------------------~~--- 321 (444)
T 3iib_A 266 GAIDDGAGVAIVTAAAKHILDLP--Q-KPERTIRVVLYAAEELGLLGGKTYAKEHEA------------------EL--- 321 (444)
T ss_dssp CTTTTHHHHHHHHHHHHHHHTSS--S-CCSEEEEEEEESCGGGTSHHHHHHHHHTGG------------------GG---
T ss_pred CCccchHHHHHHHHHHHHHHhcC--C-CCCCeEEEEEECCcccCCcCHHHHHHhhHh------------------hh---
Confidence 67899999999999888775321 1 235678899999999998775432211100 00
Q ss_pred cccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCC
Q 011000 357 IRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGST 436 (496)
Q Consensus 357 l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~T 436 (496)
-...+.|-.|+. .|+...+.... ......+...+.+.++..|++.+. ....+|++
T Consensus 322 ~~~~~~~n~D~~--------------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~SD 376 (444)
T 3iib_A 322 EKHYIAAESDFG--------------------AGPIYQIDWRV-ADTAHSPVINAMKVAEPLGVAAGN----NKASGGPD 376 (444)
T ss_dssp GGEEEEEECCST--------------------TCCEEEEEEEC-CHHHHHHHHHHGGGGGGGTCEECC----SCCCCCGG
T ss_pred hceeEEEECcCC--------------------CCcceEEEeec-ChhhHHHHHHHHHHHhhcCCcccc----CCCCCCCc
Confidence 111244555642 22222221111 111223333344444556665431 11234455
Q ss_pred hHHHHhcCCCCcEEEecc-ccc---ccccH---hhhcCHHHHHHHHHHHHHHHhhccccc
Q 011000 437 IGPILASGVGIRTVDCGI-AQL---SMHSV---REICGTEDIDIAYRHFKAFYESFSSID 489 (496)
Q Consensus 437 ig~i~~s~~Gi~tidiGi-P~l---~MHS~---rE~~~~~Dv~~~~~l~~af~~~~~~~~ 489 (496)
..++.. .|||++.+.. +.. +.||+ .+.++..++....+++..+...+...+
T Consensus 377 ~~~f~~--~GiP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~ 434 (444)
T 3iib_A 377 VSMLPA--LGVPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSK 434 (444)
T ss_dssp GTTSGG--GTCCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cHHHHH--CCCCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 667653 7999999987 443 79999 889999999999999999988776544
No 32
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=97.69 E-value=0.00041 Score=73.91 Aligned_cols=81 Identities=11% Similarity=0.138 Sum_probs=67.8
Q ss_pred ccCHHHHHHHHHHHHHC-CCCEeEEEeccCCCCCCChHHHHhcCC-CCcEEEecccccccccHhhhcCHHHHHHHHHHHH
Q 011000 402 ATSGVTAFLFKEIAKLH-NLPTQEFVVRNDMGCGSTIGPILASGV-GIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFK 479 (496)
Q Consensus 402 ~t~~~~~~~l~~ia~~~-~Ip~Q~~~~r~D~~gG~Tig~i~~s~~-Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~ 479 (496)
..|..+...+++++++. |.+.+.... +|||.+.+++... |++++.+|.-...+|+|.|-++.+|++.+.+++.
T Consensus 406 ~~d~~lv~~l~~a~~~~~G~~~~~~~~-----ggg~d~~~~~~~~p~~~~v~fGp~~~~~H~p~E~v~i~~l~~~~~~l~ 480 (490)
T 3mru_A 406 DADSEIMAIFRDMYEGIYGHKPNIMVI-----HAGLECGLFKEPYPNMDMVSFGPTIKFPHSPDEKVKIDTVQLFWDQMV 480 (490)
T ss_dssp CTTCHHHHHHHHHHHTTSSSCCCCEEE-----SSCCHHHHTTSSCTTCEEEECCCCEESTTSTTCEEEHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCeEEEE-----EecHHHHHHHHhCCCCCEEEECCCCCCCCCCCccccHHHHHHHHHHHH
Confidence 34667888888888887 887776653 6778776766654 8999999999999999999999999999999999
Q ss_pred HHHhhccc
Q 011000 480 AFYESFSS 487 (496)
Q Consensus 480 af~~~~~~ 487 (496)
.+++++.+
T Consensus 481 ~~l~~l~~ 488 (490)
T 3mru_A 481 ALLEAIPE 488 (490)
T ss_dssp HHHHHCCC
T ss_pred HHHHHhhh
Confidence 99988753
No 33
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=97.60 E-value=0.00013 Score=74.03 Aligned_cols=94 Identities=16% Similarity=0.192 Sum_probs=73.5
Q ss_pred CCCCcEEEEcCC--CCcccCHHHHHHHHHHHHH-CCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHh
Q 011000 387 MQKGLVIKHNAN--QRYATSGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVR 463 (496)
Q Consensus 387 LG~GpvIk~~~~--~~y~t~~~~~~~l~~ia~~-~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~r 463 (496)
.|.++.+.+... .-...|..+.+.+++.+++ .|++.|... .+|||.+.+++. .|+|++.+|++..++|++.
T Consensus 279 ~g~~~~i~~~~~~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~-----~~g~tDa~~~~~-~g~~~v~~Gp~~~~~H~~~ 352 (377)
T 3isz_A 279 HNLKYRIEWNLSGKPFLTKPGKLLDSITSAIEETIGITPKAET-----GGGTSDGRFIAL-MGAEVVEFGPLNSTIHKVN 352 (377)
T ss_dssp TTCCEEEEEEECCCCEECCTTHHHHHHHHHHHHHHSCCCEEEE-----CSSCCSHHHHHT-TTCEEEECCSBCTTTTSTT
T ss_pred cCCCeEEEEEecCCCCcCCCCHHHHHHHHHHHHHhCCCCeeec-----cCcccHHHHHHH-cCCCEEEECCCCCcccCCC
Confidence 455666654311 1123467788889988888 799998754 367787766664 6999999999999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHhhcc
Q 011000 464 EICGTEDIDIAYRHFKAFYESFS 486 (496)
Q Consensus 464 E~~~~~Dv~~~~~l~~af~~~~~ 486 (496)
|.++.+|+..+++++..++.++-
T Consensus 353 E~i~~~~l~~~~~i~~~~i~~ll 375 (377)
T 3isz_A 353 ECVSVEDLGKCGEIYHKMLVNLL 375 (377)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998764
No 34
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=97.54 E-value=0.00037 Score=56.72 Aligned_cols=76 Identities=12% Similarity=0.083 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccc---cccccHhhhcCHHHHHHHHHHHHHHHh
Q 011000 407 TAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ---LSMHSVREICGTEDIDIAYRHFKAFYE 483 (496)
Q Consensus 407 ~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~---l~MHS~rE~~~~~Dv~~~~~l~~af~~ 483 (496)
+...+++.+++.|++..... .+|+|.+.++.. .|+|++-+|.-. -.+|++.|-++++|+..+++++..++.
T Consensus 3 ~v~~l~~a~~~~g~~~~~~~-----~~g~TDar~~~~-~gip~v~fGPg~~~~~~~H~~dE~v~i~~l~~~~~iy~~~i~ 76 (88)
T 1q7l_B 3 WWAAFSRVCKDMNLTLEPEI-----MPAAGDNRYIRA-VGVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLP 76 (88)
T ss_dssp HHHHHHHHHHHTTCCEEEEE-----CCSCSHHHHHHH-TTCCEEEECCCCSCCCCTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCeeEeee-----eceeCcHHHHHH-cCCCEEEECCCCCCcccccCCCCeeEHHHHHHHHHHHHHHHH
Confidence 45667777888898887765 478899888775 699999999865 369999999999999999999999999
Q ss_pred hcccc
Q 011000 484 SFSSI 488 (496)
Q Consensus 484 ~~~~~ 488 (496)
+|..+
T Consensus 77 ~~~~~ 81 (88)
T 1q7l_B 77 ALASV 81 (88)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 88664
No 35
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=97.44 E-value=0.0003 Score=70.85 Aligned_cols=154 Identities=16% Similarity=0.069 Sum_probs=97.4
Q ss_pred ccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCc-------------ccccccCCCcHHHHHHHHHhh
Q 011000 276 SGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS-------------DSYQGAGAPTMFQAIRRIVGS 342 (496)
Q Consensus 276 s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs-------------~ga~gA~s~~~~d~l~ri~~~ 342 (496)
-.+.||..||.++|+++..+... .+...+.+++|+.||.|+ .|++.-+ ..
T Consensus 123 ~Ga~D~~sGva~~Le~ar~l~~~-----~~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~------------~~ 185 (309)
T 3tc8_A 123 DGADDGGSGVGALLEIARQIGQK-----APGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWA------------KN 185 (309)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHHS-----CCSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHH------------HS
T ss_pred cCcccchHhHHHHHHHHHHHHhC-----CCCCcEEEEEECccccccccccccccccccchhHHHHH------------hC
Confidence 56789999999999988876432 135578899999999998 3332111 10
Q ss_pred ccCCCCChhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCC-
Q 011000 343 LAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLP- 421 (496)
Q Consensus 343 ~~~~~~~~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip- 421 (496)
+. . ....-..+|..|+..+.+|.+. ..|. ...++ +.+...+.+.|++.|++
T Consensus 186 ~~------~---~~~~~~~~inlD~~G~~~~~~~-----------~~~~------~~~~~--~~l~~~~~~~a~~~g~~~ 237 (309)
T 3tc8_A 186 PH------V---PNYTAEYGILLDMVGGKNATFF-----------KEQQ------SLRAA--APIVEMVWSAARDLGYGK 237 (309)
T ss_dssp CS------S---TTCCCSEEEEEESCCBTTCCEE-----------ECHH------HHHHH--HHHHHHHHHHHHHHTCTT
T ss_pred CC------c---cccceEEEEEecccCCCCCcee-----------eccc------ccchH--HHHHHHHHHHHHHcCCcc
Confidence 00 0 0122346899998887654321 1111 00111 34556677778888875
Q ss_pred -EeEEEeccCCCCC---CChHHHHhcCCCCcEEEecccc---------cccccHh---hhcCHHHHHHHHHHHHHHH
Q 011000 422 -TQEFVVRNDMGCG---STIGPILASGVGIRTVDCGIAQ---------LSMHSVR---EICGTEDIDIAYRHFKAFY 482 (496)
Q Consensus 422 -~Q~~~~r~D~~gG---~Tig~i~~s~~Gi~tidiGiP~---------l~MHS~r---E~~~~~Dv~~~~~l~~af~ 482 (496)
+|... || ++-.|+.. ..|||++++ +|. .+.|++. |.++...+....+++.+++
T Consensus 238 ~f~~~~------~g~~~sDh~~f~~-~~GiP~~~l-i~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~v 306 (309)
T 3tc8_A 238 YFINAA------GGAITDDHQYVIS-GRNIPSIDI-INYDPESKTGFASYWHTQKDNMENIDRETLKAAGQTVLEVI 306 (309)
T ss_dssp TEEEEE------CCCCCCHHHHHHH-HHCCCEEEE-EBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHHHHHHHH
T ss_pred eeccCC------CCCCCCccHHHHh-cCCCCEEEE-ecccCcccCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHH
Confidence 33321 22 33455554 169999998 333 6799999 8889999999999888775
No 36
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=97.38 E-value=0.001 Score=70.55 Aligned_cols=78 Identities=14% Similarity=0.046 Sum_probs=61.9
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeccCCCCCCChHHHHhc-CCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHH
Q 011000 404 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILAS-GVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAF 481 (496)
Q Consensus 404 ~~~~~~~l~~ia~~-~~Ip~Q~~~~r~D~~gG~Tig~i~~s-~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af 481 (496)
|..+...+++.+++ .|.+...... +|||.+.++.. .-|+|++.+|.....+|++.|-++.+|+...++++..+
T Consensus 406 d~~l~~~~~~~~~~~~G~~~~~~~~-----~gg~D~~~~~~~~pg~~~v~~Gp~~~~~H~~~E~v~~~~l~~~~~~~~~~ 480 (487)
T 2qyv_A 406 HSDILDLTKTIYAQVLGTDPEIKVI-----HAGLECGLLKKIYPTIDMVSIGPTIRNAHSPDEKVHIPAVETYWKVLTGI 480 (487)
T ss_dssp CCHHHHHHHHHHHHHHSSCCEEEEE-----SSCCTHHHHHHHCTTSEEEECCCCEESTTSTTCEEEHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEE-----eccccHHHHHhhCCCCCEEEECCCCCCCCCCCceeEHHHHHHHHHHHHHH
Confidence 67788888888887 6776654432 56675554443 36899999998777899999999999999999999999
Q ss_pred Hhhcc
Q 011000 482 YESFS 486 (496)
Q Consensus 482 ~~~~~ 486 (496)
+.++.
T Consensus 481 l~~l~ 485 (487)
T 2qyv_A 481 LAHIP 485 (487)
T ss_dssp HHHCC
T ss_pred HHHHh
Confidence 98764
No 37
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=96.63 E-value=0.0026 Score=65.61 Aligned_cols=78 Identities=12% Similarity=-0.075 Sum_probs=64.8
Q ss_pred ccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEeccccc--ccccHhhhcCHHHHHHHHHHHH
Q 011000 402 ATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQL--SMHSVREICGTEDIDIAYRHFK 479 (496)
Q Consensus 402 ~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l--~MHS~rE~~~~~Dv~~~~~l~~ 479 (496)
..|+.+.+.+++.+++.|++++.... +|||.+.+.+. . +|++-+++|.. ++|++.|.++.+|+...++++.
T Consensus 327 ~~d~~l~~~~~~a~~~~g~~~~~~~~-----~ggtD~~~~~~-~-iP~~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~ 399 (408)
T 3n5f_A 327 LCSDEVKRAAEAACQKLGYPSFWLPS-----GAAHDSVQLAP-I-CPIGMIFVRSQDGVSHSPAEWSTKEDCAAGAEVLY 399 (408)
T ss_dssp ECCHHHHHHHHHHHHHHTCCCCEEEE-----SSCCTTTTTTT-T-SCEEEEEECCGGGCCSSTTCCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCcccCCC-----cCchHHHHHHH-H-CCEEEEEeCCCCCCCCCccccCCHHHHHHHHHHHH
Confidence 35788899999999999998875442 56776655554 3 99999999987 8999999999999999999999
Q ss_pred HHHhhcc
Q 011000 480 AFYESFS 486 (496)
Q Consensus 480 af~~~~~ 486 (496)
.++.++.
T Consensus 400 ~~~~~l~ 406 (408)
T 3n5f_A 400 HTVWQLA 406 (408)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9988764
No 38
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=96.48 E-value=0.014 Score=58.23 Aligned_cols=165 Identities=13% Similarity=-0.036 Sum_probs=90.5
Q ss_pred cCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHhhh
Q 011000 277 GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECT 356 (496)
Q Consensus 277 ~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~~~ 356 (496)
.+-||-.||.++||.++.+... .+...+.++|||.||.|+.|..++........+-.-.... ......
T Consensus 124 GA~D~aSG~a~lLE~ar~l~~~-----~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~-------~~~~~~ 191 (309)
T 4fuu_A 124 GANDGASGVGALLEIARLVNQQ-----QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSR-------NPHVQG 191 (309)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHS-----CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHH-------SCSSTT
T ss_pred CcccCchhHHHHHHHHHHHhhc-----CCCCceEEEeecccccCccccccchhhhhhhhcchhHHHh-------cccccC
Confidence 4679999999999988776432 1355788999999999998877765432211110000000 000011
Q ss_pred cccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCC
Q 011000 357 IRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGST 436 (496)
Q Consensus 357 l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~T 436 (496)
..-..+|..|+..+.+|.+ ..... .....+.+...+.+.+.+.+........+ ...+++
T Consensus 192 ~~i~~~inlDmvG~~~~~~------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s 250 (309)
T 4fuu_A 192 YNARFGILLDMVGGENSVF------------------LKEGY-SEEFAPDINKKVWKAAKKAGYGKTFIDER--GDTITD 250 (309)
T ss_dssp CCCSEEEEECSCCBTTCCE------------------EECHH-HHHHCHHHHHHHHHHHHHTTCTTTEEEEE--CCCCCC
T ss_pred cceEEEEeeeccCCCCCce------------------EeecC-chhhhHHHHHHHHHHHHhcCCcccccccC--CCCCCC
Confidence 2234678888765433321 11000 11223455667777888877643221111 122233
Q ss_pred -hHHHHhcCCCCcEEEecc-----c-ccccccHhhhcCHHHHHHHH
Q 011000 437 -IGPILASGVGIRTVDCGI-----A-QLSMHSVREICGTEDIDIAY 475 (496)
Q Consensus 437 -ig~i~~s~~Gi~tidiGi-----P-~l~MHS~rE~~~~~Dv~~~~ 475 (496)
-.++.- ..|||++++.. + -.+-|++.-+.+.-|.+.+.
T Consensus 251 Dh~~F~~-~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~ 295 (309)
T 4fuu_A 251 DHLFINR-LARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLK 295 (309)
T ss_dssp HHHHHHH-HTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHH
T ss_pred ChHHHHh-cCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHH
Confidence 345543 36999999832 1 12469998777766655443
No 39
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=96.44 E-value=0.0085 Score=61.91 Aligned_cols=79 Identities=11% Similarity=0.069 Sum_probs=65.4
Q ss_pred ccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEeccccc--ccccHhhhcCHHHHHHHHHHHH
Q 011000 402 ATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQL--SMHSVREICGTEDIDIAYRHFK 479 (496)
Q Consensus 402 ~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l--~MHS~rE~~~~~Dv~~~~~l~~ 479 (496)
..|..+.+.+++++++.|++.+... .+|||.+.+++.. +|++.+..|.. .+|++.|.++.+|+...++++.
T Consensus 331 ~~~~~l~~~~~~~~~~~g~~~~~~~-----~~ggtD~~~~~~~--~p~~~~~~p~~~~~~H~~~E~i~~~~l~~~~~~~~ 403 (423)
T 1z2l_A 331 PMNKELVATLTELCEREKLNYRVMH-----SGAGHDAQIFAPR--VPTCMIFIPSINGISHNPAERTNITDLAEGVKTLA 403 (423)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEEE-----ESSCCTHHHHTTT--SCEEEEEECCGGGCCSSTTCCCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCeEEec-----CCCcccHHHHHhh--CCEEEEEeCCCCCCCCCccccCCHHHHHHHHHHHH
Confidence 3478889999999999999987644 2677776666543 99988877776 6999999999999999999999
Q ss_pred HHHhhccc
Q 011000 480 AFYESFSS 487 (496)
Q Consensus 480 af~~~~~~ 487 (496)
.++..+..
T Consensus 404 ~~~~~l~~ 411 (423)
T 1z2l_A 404 LMLYQLAW 411 (423)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHh
Confidence 99988754
No 40
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=96.38 E-value=0.0061 Score=61.41 Aligned_cols=154 Identities=14% Similarity=-0.050 Sum_probs=75.7
Q ss_pred ccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCc--------------ccccccCCCcHHHHHHHHHh
Q 011000 276 SGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS--------------DSYQGAGAPTMFQAIRRIVG 341 (496)
Q Consensus 276 s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs--------------~ga~gA~s~~~~d~l~ri~~ 341 (496)
-.+.||..||.++|++++.+... .....+.+++|+.||.|+ .|++--+ .
T Consensus 125 ~GA~D~~sGva~~Le~ar~l~~~-----~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~------------~ 187 (314)
T 3gux_A 125 LGVNDGASGVGVLLEIARQIQKE-----QPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWA------------R 187 (314)
T ss_dssp -----CHHHHHHHHHHHHHHHHS-----CCSSEEEEEEECSCCC-----------CTTSCHHHHHHH------------H
T ss_pred CCCcccHHHHHHHHHHHHHHHhC-----CCCCcEEEEEECCccccccccccccccccccchhHHHHH------------h
Confidence 46789999999999988876432 135578899999999998 3332111 0
Q ss_pred hccCCCCChhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCC
Q 011000 342 SLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLP 421 (496)
Q Consensus 342 ~~~~~~~~~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip 421 (496)
.+. . ......++|..|+..+.+|.+. ..|+ ...+ .+.+...+.+.++..++.
T Consensus 188 ~~~------~---~~~~~~~~inlDm~G~~~~~~~-----------~~g~------~~~~--~~~l~~~~~~~~~~~g~~ 239 (314)
T 3gux_A 188 TPH------V---QNYNARYGILLDMVGGKDATFY-----------YEGY------SART--ARSEMKKIWKKAHELGYG 239 (314)
T ss_dssp SCS------S---TTCCCSEEEEEESCCBTTCCEE-----------ECTT------HHHH--CHHHHHHHHHHHHHHTCT
T ss_pred CCc------c---cccceeEEEEEeccCCCCCcee-----------eecc------cccc--HHHHHHHHHHHHHHcCCc
Confidence 000 0 0123347899999887654321 1121 0011 245567777778887764
Q ss_pred --EeEEEeccCCCCCCChHHHHhcCCCCcEEEecccc----------cccccHhhhcCHHHHHHHHHHHH
Q 011000 422 --TQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ----------LSMHSVREICGTEDIDIAYRHFK 479 (496)
Q Consensus 422 --~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~----------l~MHS~rE~~~~~Dv~~~~~l~~ 479 (496)
++... . ....++-.|+.. +.|||++++. |. -+-|++.-+.+.-|...+.+..+
T Consensus 240 ~~f~~~~--~-~~~~sDh~pF~~-~~GiP~l~~i-~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~~ 304 (314)
T 3gux_A 240 KYFVKED--G-GETVDDHIYVNK-LARIPCVDII-NYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVGQ 304 (314)
T ss_dssp TTEEEEE--C-CCCCCHHHHHHH-HSCCCEEEEE-BCC--------------------CBCHHHHHHHHH
T ss_pred ccccccc--C-CCCCCccHHHHh-cCCCceEEEe-cccccccccCCCCCCCCCcCcchhCCHHHHHHHHH
Confidence 23221 0 001233456554 2699999993 32 56899886666555555444433
No 41
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=96.29 E-value=0.017 Score=58.35 Aligned_cols=48 Identities=19% Similarity=0.047 Sum_probs=33.7
Q ss_pred cCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccc
Q 011000 277 GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSY 324 (496)
Q Consensus 277 ~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga 324 (496)
++-||=.||.++||+.+.+.+.......+..++.++|||.||.|..+.
T Consensus 126 GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~ 173 (330)
T 4fai_A 126 GATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWG 173 (330)
T ss_dssp CTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCB
T ss_pred CCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEecccccccccc
Confidence 467999999999998776531000001235678999999999998754
No 42
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=95.89 E-value=0.0064 Score=56.62 Aligned_cols=55 Identities=18% Similarity=0.094 Sum_probs=40.4
Q ss_pred CCeeeccC-CCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccC-cccccccC
Q 011000 271 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVG-SDSYQGAG 328 (496)
Q Consensus 271 ~e~I~s~~-LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVG-s~ga~gA~ 328 (496)
++++.|++ .||+.++.++|+|+..+..... .....++++|+.+||+| ++|+.-..
T Consensus 103 ~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~---~~~~~v~~~~~~~EE~g~~~Ga~~~~ 159 (198)
T 1q7l_A 103 EGYIYARGAQDMKCVSIQYLEAVRRLKVEGH---RFPRTIHMTFVPDEEVGGHQGMELFV 159 (198)
T ss_dssp TSEEECTTTTTTHHHHHHHHHHHHHHHHTTC---CCSSCEEEEEESCGGGTSTTTHHHHT
T ss_pred CCEEEeCcchhchHHHHHHHHHHHHHHHcCC---CCCCCEEEEEEcccccCccccHHHHH
Confidence 45677777 9999999999999887643210 12456889999999998 57765443
No 43
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=95.41 E-value=0.053 Score=53.96 Aligned_cols=187 Identities=14% Similarity=0.079 Sum_probs=88.3
Q ss_pred ccCCCchhhHHHHHHHHHHcCCCC-CC-CCCCCceEEEEEEeccccCcccccccCCCcHH--HHHHHHHhhccCCCCChh
Q 011000 276 SGRLDNLASSYCGLRALIDSCVSP-SN-LSSEHAIRMVALFDNEEVGSDSYQGAGAPTMF--QAIRRIVGSLAHEHVSET 351 (496)
Q Consensus 276 s~~LDNr~~~~~~leal~~~~~~~-~~-l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~--d~l~ri~~~~~~~~~~~~ 351 (496)
-++-||=.||.++||.++.+.... +. -..+..++.++|||.||.|..+... ..++- .+.++....... .....
T Consensus 99 ~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~--~~L~GS~~~a~~~~~~~~~-~~~~~ 175 (312)
T 4f9u_A 99 VGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDA--DSVYGSKHLAAKLASKRSG-SQAQL 175 (312)
T ss_dssp CCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSS--SSCHHHHHHHHHHHHCBC-------
T ss_pred CCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCcc--ccccChHHHHHHHHhhccc-ccccc
Confidence 467899999999999877652100 00 0124567899999999999654321 11111 111111110000 00000
Q ss_pred hHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCC-E-eEEEecc
Q 011000 352 SFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLP-T-QEFVVRN 429 (496)
Q Consensus 352 ~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip-~-Q~~~~r~ 429 (496)
.....-.-...|-.|+....+|.+. ............+....+.+.+...++ . ..+..+.
T Consensus 176 ~~~~~~~i~~~inlDmvg~~~~~~~------------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 237 (312)
T 4f9u_A 176 APRNIDRIEVLVLLDLIGARNPKFS------------------SFYENTDGLHSSLVQIEKSLRTAGQLEGNNNMFLSRV 237 (312)
T ss_dssp -CBGGGGEEEEEEEESCCSSSCCEE------------------ECCGGGHHHHHHHHHHHHHHHHTTCSSSSCCCEEEEE
T ss_pred ccccccceeeeeeeeccccCCCCce------------------EEEeccchhhhHHHHHHHHHHHhcccccccccccccc
Confidence 0000112235678887665443321 110000001112222223333332222 1 1122221
Q ss_pred CC-CCCCChHHHHhcCCCCcEEEecc-cc-cccccHhhh---cCHHHHHHHHHHHHHHHhhc
Q 011000 430 DM-GCGSTIGPILASGVGIRTVDCGI-AQ-LSMHSVREI---CGTEDIDIAYRHFKAFYESF 485 (496)
Q Consensus 430 D~-~gG~Tig~i~~s~~Gi~tidiGi-P~-l~MHS~rE~---~~~~Dv~~~~~l~~af~~~~ 485 (496)
.. .++++-.|+.. .|||++++.- |- .+-|++.-+ ++...++...+++.+|+-+|
T Consensus 238 ~~~~~~SDH~pF~~--~GIP~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~ 297 (312)
T 4f9u_A 238 SGGLVDDDHRPFLD--ENVPVLHLVATPFPDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQY 297 (312)
T ss_dssp CSSCCCCTTHHHHT--TTCCEEEEECSSCCTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCchHHHHH--CCCCEEEEECCCCCCCCCCCccChhhCCHHHHHHHHHHHHHHHHHH
Confidence 11 12344567764 6999999832 11 246987644 56666777788888887554
No 44
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=95.23 E-value=0.028 Score=56.98 Aligned_cols=172 Identities=12% Similarity=0.044 Sum_probs=93.2
Q ss_pred cCCCchhhHHHHHHHHHHcCCCCC--CCCCCCceEEEEEEecccc--------CcccccccCCCcHHHHHHHHHhhccCC
Q 011000 277 GRLDNLASSYCGLRALIDSCVSPS--NLSSEHAIRMVALFDNEEV--------GSDSYQGAGAPTMFQAIRRIVGSLAHE 346 (496)
Q Consensus 277 ~~LDNr~~~~~~leal~~~~~~~~--~l~~~~~~~~~v~~dqEEV--------Gs~ga~gA~s~~~~d~l~ri~~~~~~~ 346 (496)
++-||-+||.++||+++.+....+ .-..+...+.+++|+.||. |+.|++.-+.. +....-
T Consensus 131 GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~~~a~~--------~~~~~~-- 200 (330)
T 3pb6_X 131 GATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQL--------MESIPH-- 200 (330)
T ss_dssp CTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCHHHHHHHHH--------HHHSBC--
T ss_pred CCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCccHHHHHHH--------HHhcCC--
Confidence 567999999999998877642000 0001356788999999998 66655432211 111000
Q ss_pred CCChhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHH---HHHHHHHHHCCC---
Q 011000 347 HVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTA---FLFKEIAKLHNL--- 420 (496)
Q Consensus 347 ~~~~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~---~~l~~ia~~~~I--- 420 (496)
.. .....-.-..+|..||..+.+|.++.. |.+..... ..+.+.+++.|.
T Consensus 201 --~~-~~~~~~~i~~~inlDmiG~~~~~~~~~----------------------~~~t~~~~~~l~~i~~~~~~~g~~~~ 255 (330)
T 3pb6_X 201 --SP-GPTRIQAIELFMLLDLLGAPNPTFYSH----------------------FPRTVRWFHRLRSIEKRLHRLNLLQS 255 (330)
T ss_dssp --SS-CSBTTTTEEEEEEEESCSSSSCCBCCC----------------------CGGGHHHHHHHHHHHHHHHHTTCCSS
T ss_pred --cc-ccchhhCeEEEEeccCCCCCCCCceee----------------------cCcchHHHHHHHHHHHHHHHcCcccc
Confidence 00 000011224789999988766543110 11111111 223334445554
Q ss_pred -C--EeEEEe-ccCCCCCCChHHHHhcCCCCcEEEecc-cc-cccccHhh---hcCHHHHHHHHHHHHHHHhhc
Q 011000 421 -P--TQEFVV-RNDMGCGSTIGPILASGVGIRTVDCGI-AQ-LSMHSVRE---ICGTEDIDIAYRHFKAFYESF 485 (496)
Q Consensus 421 -p--~Q~~~~-r~D~~gG~Tig~i~~s~~Gi~tidiGi-P~-l~MHS~rE---~~~~~Dv~~~~~l~~af~~~~ 485 (496)
| .++|.. .....+.|+=.|+.. .|||++.+.. |- .+-|++.- .++...+....+++.+|.-+|
T Consensus 256 ~p~~~~~f~~~~~~~~~~SDH~pF~~--~GIP~~~~~~~~f~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~Ey 327 (330)
T 3pb6_X 256 HPQEVMYFQPGEPFGSVEDDHIPFLR--RGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFLAEY 327 (330)
T ss_dssp CCSSCSSBCSSCSSCCCSCTTHHHHT--TTCCEEEEECSSCCTTTTSTTCSGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccccccccCCCCCCchHhHHH--CCCCEEEEEcCCCCCCCCCCcCchhhCCHHHHHHHHHHHHHHHHHH
Confidence 2 122221 111112344567765 7999999864 32 35699865 566777778888888887654
No 45
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=95.10 E-value=0.016 Score=59.28 Aligned_cols=79 Identities=10% Similarity=0.140 Sum_probs=62.6
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHH
Q 011000 404 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFY 482 (496)
Q Consensus 404 ~~~~~~~l~~ia~~-~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~ 482 (496)
|..+...+++.+++ .|++.+... .+|||.+.+++. .|+|++.+|..-..+|++.|-++.+|+..+++++..++
T Consensus 301 ~~~l~~~~~~~~~~~~g~~~~~~~-----~~g~~D~~~~~~-~~~P~v~~Gp~~~~~H~~~E~i~~~~l~~~~~~~~~~l 374 (393)
T 1vgy_A 301 AGKLTDVARAAIAETCGIEAELST-----TGGTSDGRFIKA-MAQELIELGPSNATIHQINENVRLNDIPKLSAVYEGIL 374 (393)
T ss_dssp SSHHHHHHHHHHHHHHSSCCEEEC-----CSCCCTHHHHGG-GEEEEEECCSBCTTTTSTTCEEETTHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCCceEec-----CCccchHHHHHh-CCCCEEEECCCCCCCCCCCCceeHHHHHHHHHHHHHHH
Confidence 45667778888777 488765432 367777776654 69999999998888999999999999999999999999
Q ss_pred hhcccc
Q 011000 483 ESFSSI 488 (496)
Q Consensus 483 ~~~~~~ 488 (496)
..+...
T Consensus 375 ~~l~~~ 380 (393)
T 1vgy_A 375 VRLLAG 380 (393)
T ss_dssp HHHC--
T ss_pred HHHhcc
Confidence 888654
No 46
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=94.94 E-value=0.033 Score=56.05 Aligned_cols=43 Identities=21% Similarity=0.114 Sum_probs=29.7
Q ss_pred cCCCchhhHHHHHHHHHHcCCCCCCC-----CCCCceEEEEEEecccc
Q 011000 277 GRLDNLASSYCGLRALIDSCVSPSNL-----SSEHAIRMVALFDNEEV 319 (496)
Q Consensus 277 ~~LDNr~~~~~~leal~~~~~~~~~l-----~~~~~~~~~v~~dqEEV 319 (496)
++.||-.||.++|+++..+......+ ..+...+.+++|+.||.
T Consensus 124 Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~ 171 (329)
T 2afw_A 124 GATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEA 171 (329)
T ss_dssp CTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSC
T ss_pred CcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCccc
Confidence 45799999999999887763210000 01345788999999998
No 47
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=94.80 E-value=0.057 Score=56.88 Aligned_cols=79 Identities=11% Similarity=-0.009 Sum_probs=63.2
Q ss_pred ccCHHHHHHHHHHHHHCC-C-CEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccccc--cccHhhhcCHHHHHHHHHH
Q 011000 402 ATSGVTAFLFKEIAKLHN-L-PTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLS--MHSVREICGTEDIDIAYRH 477 (496)
Q Consensus 402 ~t~~~~~~~l~~ia~~~~-I-p~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~--MHS~rE~~~~~Dv~~~~~l 477 (496)
..|..+.+.+++++++.| + +.+.... +|||.+.+++. . +|++.+..|... +|++.|-++.+|+...+++
T Consensus 365 ~~d~~l~~~~~~a~~~~G~~~~~~~~~~-----~ggtD~~~~~~-~-~P~~~~fgp~~~~~~H~p~E~i~~~~l~~~~~~ 437 (474)
T 2v8h_A 365 NFHEVCIECVSRSAFAQFKKDQVRQIWS-----GAGHDSCQTAP-H-VPTSMIFIPSKDGLSHNYYEYSSPEEIENGFKV 437 (474)
T ss_dssp ECCHHHHHHHHHHHHHHSCGGGEEEEEE-----SSCCTHHHHTT-T-SCEEEEEECCGGGCCSSTTCCCCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCcceecCC-----cCCccHHHHHh-h-CCEEEEEeCCCCCCCCCccccCCHHHHHHHHHH
Confidence 457888899999999888 7 7765543 67777666654 3 999777777643 8999999999999999999
Q ss_pred HHHHHhhccc
Q 011000 478 FKAFYESFSS 487 (496)
Q Consensus 478 ~~af~~~~~~ 487 (496)
+..++..+..
T Consensus 438 ~~~~l~~l~~ 447 (474)
T 2v8h_A 438 LLQAIINYDN 447 (474)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887654
No 48
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=94.48 E-value=0.015 Score=64.88 Aligned_cols=51 Identities=14% Similarity=-0.007 Sum_probs=35.7
Q ss_pred cCCCchhhHHHHHHHHHHcCCCC-CCCCCCCceEEEEEEeccccCcccccccC
Q 011000 277 GRLDNLASSYCGLRALIDSCVSP-SNLSSEHAIRMVALFDNEEVGSDSYQGAG 328 (496)
Q Consensus 277 ~~LDNr~~~~~~leal~~~~~~~-~~l~~~~~~~~~v~~dqEEVGs~ga~gA~ 328 (496)
.+.||-.||.++|++++.+.... ... .+..++++++|+.||.|+.|++.-.
T Consensus 341 Ga~D~~sG~a~lLe~ar~l~~~~~~g~-~p~r~I~f~~~~~EE~Gl~GS~~~~ 392 (707)
T 3fed_A 341 GAIDPTSGVAVLQEIARSFGKLMSKGW-RPRRTIIFASWDAEEFGLLGSTEWA 392 (707)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHTTC-CCSEEEEEEEESCGGGTSHHHHHHH
T ss_pred CCccCcHHHHHHHHHHHHHHhhhhccC-CCCCCEEEEEeCCccccchhHHHHH
Confidence 47899999999998766553100 000 1356789999999999987776433
No 49
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=92.66 E-value=0.024 Score=62.44 Aligned_cols=148 Identities=11% Similarity=0.037 Sum_probs=84.0
Q ss_pred ccCCCchhhHHHHHHHHHHcCCC--CCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhH
Q 011000 276 SGRLDNLASSYCGLRALIDSCVS--PSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSF 353 (496)
Q Consensus 276 s~~LDNr~~~~~~leal~~~~~~--~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~ 353 (496)
-.+.||-.|+.++||.++.+... .... .+..++++++|+.||.|+.|++.-....... .
T Consensus 294 ~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~-~p~r~I~f~~~~~EE~gl~GS~~~~~~~~~~------------------l 354 (640)
T 3kas_A 294 PGAAKSGVGTALLLKLAQMFSDMVLKDGF-QPSRSIIFASWSAGDFGSVGATEWLEGYLSS------------------L 354 (640)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHHHHHTSCC-CCSEEEEEEEESSGGGTSHHHHHHHHHTTTT------------------G
T ss_pred CCCCcCcHHHHHHHHHHHHHHHhhhhcCC-CCCCcEEEEEECCcccCchhHHHHHHhhhhh------------------h
Confidence 35679999999999877665320 0001 2456788999999999987765322111000 0
Q ss_pred hhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeE---EE----
Q 011000 354 ECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQE---FV---- 426 (496)
Q Consensus 354 ~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~---~~---- 426 (496)
. -.--..|.+|++.. |. ..+.. .+++.+..++++++++..-|... +.
T Consensus 355 ~--~~~~a~iNlD~~~~-----------------G~-~~l~~------~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w 408 (640)
T 3kas_A 355 H--LKAFTYINLDKAVL-----------------GT-SNFKV------SASPLLYTLIEKTMQNVKHPVTGQFLYQDSNW 408 (640)
T ss_dssp G--GTEEEEEECTTCBS-----------------CS-SEEEE------EECGGGHHHHHHHHTTCBCTTTCSBSCCCTTG
T ss_pred h--hCEEEEEecccCcc-----------------CC-CceEE------EeCHHHHHHHHHHHHhCCCCCCCCceeccccc
Confidence 0 01124466665331 11 12332 23566678888888887766421 10
Q ss_pred -eccC-CCCCCChHHHHhcCCCCcEEEecccc----cccccHhhhcCHH
Q 011000 427 -VRND-MGCGSTIGPILASGVGIRTVDCGIAQ----LSMHSVREICGTE 469 (496)
Q Consensus 427 -~r~D-~~gG~Tig~i~~s~~Gi~tidiGiP~----l~MHS~rE~~~~~ 469 (496)
.+.. .++||+..+++. ..|||.+|++.-- -+-||+..+.+.-
T Consensus 409 ~~~~~~~~~~sD~~~F~~-~~GIP~~~~~~~~~~~y~~yHT~~Dt~~~i 456 (640)
T 3kas_A 409 ASKVEKLTLDNAAFPFLA-YSGIPAVSFCFCEDTDYPYLGTTMDTYKEL 456 (640)
T ss_dssp GGGCCCCCTTSTHHHHHH-HHCCCEEEEEEECSSCCTTTTSTTCCHHHH
T ss_pred ccccCCCCCCcchHHHHH-hCCCCeeeccccCCCCCCCcCCccccHHHH
Confidence 0111 233444567765 3799999998532 2469988776643
No 50
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=92.24 E-value=0.11 Score=54.49 Aligned_cols=78 Identities=14% Similarity=0.154 Sum_probs=59.0
Q ss_pred cCHHHHHHHHHHHHHC-CCCEeEEEeccCCCCCC-ChHHHHhcCCCCcEEEecccc--cccccHhhhcCHHHHHHHHHHH
Q 011000 403 TSGVTAFLFKEIAKLH-NLPTQEFVVRNDMGCGS-TIGPILASGVGIRTVDCGIAQ--LSMHSVREICGTEDIDIAYRHF 478 (496)
Q Consensus 403 t~~~~~~~l~~ia~~~-~Ip~Q~~~~r~D~~gG~-Tig~i~~s~~Gi~tidiGiP~--l~MHS~rE~~~~~Dv~~~~~l~ 478 (496)
.|..+...+++++++. |.+..... ..||+ +.+.+... .|+|++-+|.-. -.+|++.|-++.+++...++++
T Consensus 399 ~d~~l~~~~~~a~~~~~g~~~~~~~----~~gg~~D~~~~~~~-~g~p~v~~G~g~~~~~~H~~~E~i~i~~l~~~~~~~ 473 (481)
T 2pok_A 399 MSAPAILNVIELAKKFYPQGVSVLP----TTAGTGPMHTVFDA-LEVPMVAFGLGNANSRDHGGDENVRIADYYTHIELV 473 (481)
T ss_dssp SCSHHHHHHHHHHTTTCTTCEEEES----CBSSCCTHHHHHHH-HCCCEEBCCSBCTTCCTTSTTCEEEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCccccc----cCCCCCchHHHHHH-cCCCEEEecCCCcccCCCCCCCcEEHHHHHHHHHHH
Confidence 3677888888888874 87664332 23555 35545433 699999888753 6799999999999999999999
Q ss_pred HHHHhhc
Q 011000 479 KAFYESF 485 (496)
Q Consensus 479 ~af~~~~ 485 (496)
..++..+
T Consensus 474 ~~~l~~l 480 (481)
T 2pok_A 474 EELIRSY 480 (481)
T ss_dssp HHHHHTT
T ss_pred HHHHHhc
Confidence 9998765
No 51
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.17 E-value=0.16 Score=51.25 Aligned_cols=49 Identities=12% Similarity=0.106 Sum_probs=39.9
Q ss_pred CCCChHHHHhcCCCCcEEEeccc-ccccccHhhhcCHHHHHHHHHHHHHHHhhc
Q 011000 433 CGSTIGPILASGVGIRTVDCGIA-QLSMHSVREICGTEDIDIAYRHFKAFYESF 485 (496)
Q Consensus 433 gG~Tig~i~~s~~Gi~tidiGiP-~l~MHS~rE~~~~~Dv~~~~~l~~af~~~~ 485 (496)
+|||.+. ..|+|++-+|.. .-.+|++.|-++.+++...++++..++..+
T Consensus 305 ~g~tD~~----~~~~p~v~~G~g~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~ 354 (356)
T 3ct9_A 305 PTLSDQA----LMSFASVKIGPGRSSRSHTAEEYIMLKEIEEAIGIYLDLLDGL 354 (356)
T ss_dssp CSCCGGG----GCCSCEEECCSSBGGGTTSTTCEEEHHHHHHHHHHHHHHHTTC
T ss_pred ccccchh----hcCCCEEEECCCccccCcCCCcEEEHHHHHHHHHHHHHHHHHh
Confidence 4666544 259999999975 346899999999999999999999988664
No 52
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=92.11 E-value=0.13 Score=52.01 Aligned_cols=77 Identities=10% Similarity=0.003 Sum_probs=58.2
Q ss_pred cccC-HHHHHHHHHHHHH-CCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccc-cccccHhhhcCHHHHHHHHHH
Q 011000 401 YATS-GVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ-LSMHSVREICGTEDIDIAYRH 477 (496)
Q Consensus 401 y~t~-~~~~~~l~~ia~~-~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~-l~MHS~rE~~~~~Dv~~~~~l 477 (496)
+.++ ..+.+.+++.+++ .|.+.. .. .+|||.+.+++. .|+|++-+|... -.+|++.|-++.+|+...+++
T Consensus 288 ~~~~~~~l~~~~~~a~~~~~g~~~~-~~-----~~g~~D~~~~~~-~g~p~v~~Gpg~~~~~H~~~E~~~~~~l~~~~~~ 360 (369)
T 2f7v_A 288 GDIARAEERRLAARDVADALDLPIG-NA-----VDFWTEASLFSA-GGYTALVYGPGDIAQAHTADEFVTLAQLQRYVES 360 (369)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCCBC-CC-----BSSCCTHHHHHH-TTCCEEECCSSCGGGTTCTTCEEEHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHhhCCCCC-cc-----ccccCcHHHHhh-CCCCEEEECCCCccccCCCCceEEHHHHHHHHHH
Confidence 3344 5677888888876 476653 11 356776666665 599999999754 568999999999999999999
Q ss_pred HHHHHhh
Q 011000 478 FKAFYES 484 (496)
Q Consensus 478 ~~af~~~ 484 (496)
+..++..
T Consensus 361 ~~~~~~~ 367 (369)
T 2f7v_A 361 VNRIING 367 (369)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9988764
No 53
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=91.44 E-value=0.15 Score=53.44 Aligned_cols=79 Identities=14% Similarity=-0.018 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHHHHC-CCCEeEEEeccCCCCCCChH-HHHhcCCCCcEEEe--cccccccccHhhhcCHHHHHHHHHHHH
Q 011000 404 SGVTAFLFKEIAKLH-NLPTQEFVVRNDMGCGSTIG-PILASGVGIRTVDC--GIAQLSMHSVREICGTEDIDIAYRHFK 479 (496)
Q Consensus 404 ~~~~~~~l~~ia~~~-~Ip~Q~~~~r~D~~gG~Tig-~i~~s~~Gi~tidi--GiP~l~MHS~rE~~~~~Dv~~~~~l~~ 479 (496)
|..+...+++.+++. |.+..... .+||+.. .+.....|+|++-+ |.+.-..|++.|-++.+|+...++++.
T Consensus 394 d~~~~~~~~~a~~~~~g~~~~~~~-----~~gs~d~~~~~~~~~~~p~~~~g~g~~~~~~H~~~E~i~~~~l~~~~~~~~ 468 (479)
T 2zog_A 394 NHPHYQAGRRALKTVFGVEPDLTR-----EGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLA 468 (479)
T ss_dssp TSHHHHHHHHHHHHHHSSCCEEEE-----ESSCCTHHHHHHHHHCSEEEECCCBCTTCCTTSTTCEEEHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCceecC-----CCCccchHHHHHHHhCCCEEEecCCCCccCCCCCCCcEeHHHHHHHHHHHH
Confidence 445566666666663 65443321 2466653 34443369999985 655567999999999999999999999
Q ss_pred HHHhhccc
Q 011000 480 AFYESFSS 487 (496)
Q Consensus 480 af~~~~~~ 487 (496)
.++..+..
T Consensus 469 ~~~~~~~~ 476 (479)
T 2zog_A 469 AYLYEVSQ 476 (479)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99987754
No 54
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=91.05 E-value=0.5 Score=43.54 Aligned_cols=56 Identities=18% Similarity=0.035 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCce
Q 011000 74 PFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCL 143 (496)
Q Consensus 74 ~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl 143 (496)
...+.++++++|++.||+.. .+.... ...|+++...|+.+ ..+.+++.||+|.+..
T Consensus 31 e~~~~~~l~~~l~~~g~~~~----~~~~~~--------g~~~~i~~~~g~~~--~~~~ill~aH~DtVp~ 86 (198)
T 1q7l_A 31 YGAAVAFFEETARQLGLGCQ----KVEVAP--------GYVVTVLTWPGTNP--TLSSILLNSHTDVVPV 86 (198)
T ss_dssp HHHHHHHHHHHHHHHTCEEE----EEEEET--------TEEEEEEEECCSST--TSCEEEEEEECCBCCC
T ss_pred HHHHHHHHHHHHHHCCCeEE----EEEcCC--------CCeEEEEEEccCCC--CCCeEEEEeeecccCC
Confidence 35688999999999999631 111111 12378876656432 1246999999999875
No 55
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=90.82 E-value=0.57 Score=47.90 Aligned_cols=52 Identities=15% Similarity=0.096 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCce
Q 011000 74 PFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCL 143 (496)
Q Consensus 74 ~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl 143 (496)
++.+.++++++|++.||+.. .+..| |++|...|+++ +.+.+++.||||++..
T Consensus 34 e~~~~~~l~~~l~~~g~~~~---------------~d~~g-nv~a~~~g~~~--~~~~i~l~aH~D~v~~ 85 (408)
T 3n5f_A 34 ERRAKDLVASYMREAGLFVY---------------EDAAG-NLIGRKEGTNP--DATVVLVGSHLDSVYN 85 (408)
T ss_dssp HHHHHHHHHHHHHHHTCEEE---------------ECTTC-CEEEEECCSST--TSCEEEEEEESCCCTT
T ss_pred HHHHHHHHHHHHHHCCCEEE---------------EcCCC-CEEEEecCCCC--CCCEEEEEecCCCCCC
Confidence 45689999999999998631 12345 89998767542 1346999999999873
No 56
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=90.63 E-value=0.68 Score=45.89 Aligned_cols=75 Identities=16% Similarity=0.058 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhcC-CChHH--HHHHHHHHHHHCCCccccccccccccC-CCeEEEeecCcEEEEEEeCCcccCCCCeeEE
Q 011000 59 SIVGDLLDYLNES-WTPFH--ATAEAKRLLIDAGFELLNENDEWELKP-GGGYFFTRNMSCLVAFAVGQKYSVGNGFHII 134 (496)
Q Consensus 59 ~~a~~~~~Fl~~s-~T~~h--~v~~~~~~L~~~GF~~l~e~~~w~l~~-g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi 134 (496)
++.+.+.+|=.+- -|+-| +.+++++.|++.|++... +...... .++.. ...||||...|+. ...+||
T Consensus 29 ~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~--q~~~~~~~~~~~~---~~~Nii~~~~g~~----~~~i~l 99 (309)
T 4fuu_A 29 LYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTN--QYADLIAYDGTLL---KARNIIGSYKPES----KKRIAL 99 (309)
T ss_dssp HHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEE--EEEEEECTTSCEE---EEEEEEEEESTTC----SSEEEE
T ss_pred HHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEE--EeEEeccCCCCcc---eeEEEEEEECCCC----CceEEE
Confidence 3445555553222 25555 799999999999987432 2222222 22221 2348999876653 347999
Q ss_pred EEeccCCc
Q 011000 135 AAHTDSPC 142 (496)
Q Consensus 135 ~AH~Dspg 142 (496)
+||.|+.+
T Consensus 100 ~aH~Ds~~ 107 (309)
T 4fuu_A 100 FAHWDTRP 107 (309)
T ss_dssp EEECCCCS
T ss_pred EeecCCCC
Confidence 99999953
No 57
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=90.48 E-value=0.2 Score=52.63 Aligned_cols=52 Identities=17% Similarity=0.095 Sum_probs=38.1
Q ss_pred CCeeeccC-CCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCccccc
Q 011000 271 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 325 (496)
Q Consensus 271 ~e~I~s~~-LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~ 325 (496)
++++.|++ .||+.++.++|.|+..+..... .....+.++|+..||+|+.|+.
T Consensus 137 ~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~---~~~~~v~~~~~~~EE~g~~g~~ 189 (481)
T 2pok_A 137 NGFMYGRGVDDDKGHITARLSALRKYMQHHD---DLPVNISFIMEGAEESASTDLD 189 (481)
T ss_dssp TTEEESTTTTTTHHHHHHHHHHHHHHHHTCS---SCSSEEEEEEESCGGGTTTTHH
T ss_pred CCeEEccccccCcHHHHHHHHHHHHHHHhcC---CCCCCEEEEEecccccCchhHH
Confidence 34566665 8999999999998887643100 1245688899999999987654
No 58
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=90.12 E-value=0.096 Score=53.03 Aligned_cols=73 Identities=12% Similarity=0.128 Sum_probs=55.1
Q ss_pred CHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEeccccc-ccccHhhhcCHHHHHHHHHHHHHHH
Q 011000 404 SGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQL-SMHSVREICGTEDIDIAYRHFKAFY 482 (496)
Q Consensus 404 ~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l-~MHS~rE~~~~~Dv~~~~~l~~af~ 482 (496)
|..+.+.++++++..|.| .+|||.+.+++. .|+|++.+|.... .+|++.|-++.+++...++++..++
T Consensus 287 ~~~l~~~~~~~~~~~g~~----------~~g~~D~~~~~~-~~~p~v~~Gp~~~~~~H~~~E~i~~~~l~~~~~~~~~~~ 355 (364)
T 2rb7_A 287 DSPYTERLLALSGATAGK----------AHGASDARYLGE-NGLTGVVWGAEGFNTLHSRDECLHIPSLQSIYDPLMQLA 355 (364)
T ss_dssp CCHHHHHHHHHHCCEEEE----------ESSCCGGGGTGG-GTCCEEECCCCCTTCTTSTTCEEETTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCC----------CCCCchHHHHHh-cCCCEEEECCCCccccCCCCccccHHHHHHHHHHHHHHH
Confidence 345667777776533311 256676666554 6999999998766 6799999999999999999999998
Q ss_pred hhccc
Q 011000 483 ESFSS 487 (496)
Q Consensus 483 ~~~~~ 487 (496)
..+..
T Consensus 356 ~~~~~ 360 (364)
T 2rb7_A 356 REMEE 360 (364)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 87653
No 59
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=89.92 E-value=0.5 Score=49.52 Aligned_cols=79 Identities=15% Similarity=0.066 Sum_probs=59.0
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeccCCCCCCCh-HHHHhcCC-CCcEEEecc--cccccccHhhhcCHHHHHHHHHHH
Q 011000 404 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTI-GPILASGV-GIRTVDCGI--AQLSMHSVREICGTEDIDIAYRHF 478 (496)
Q Consensus 404 ~~~~~~~l~~ia~~-~~Ip~Q~~~~r~D~~gG~Ti-g~i~~s~~-Gi~tidiGi--P~l~MHS~rE~~~~~Dv~~~~~l~ 478 (496)
++.+.+.+++.+++ .|.+..... .||++. ..++.... |+|++-+|+ |--..|++.|-++.+|+...++++
T Consensus 387 ~~~l~~~~~~a~~~~~G~~~~~~~-----~gg~d~f~~~~~~~~Pg~p~v~~G~g~~~~~~H~p~E~i~~~~l~~g~~~l 461 (472)
T 3pfe_A 387 SDWLAKAASEASMTYYDKPAAYMG-----EGGTIPFMSMLGEQFPKAQFMITGVLGPHSNAHGPNEFLHLDMVKKLTSCV 461 (472)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEE-----ESSCCHHHHHHHHHCTTCEEEEECCBCTTCCTTSTTCEEEHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHcCCCceecc-----CCCchhhHHHHHHHcCCCCEEEecCCCCCCCCcCCCcceeHHHHHHHHHHH
Confidence 46677888888887 577665422 244442 34454434 999999887 556799999999999999999999
Q ss_pred HHHHhhccc
Q 011000 479 KAFYESFSS 487 (496)
Q Consensus 479 ~af~~~~~~ 487 (496)
..++..+.+
T Consensus 462 ~~~l~~la~ 470 (472)
T 3pfe_A 462 SYVLYSFSQ 470 (472)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999987753
No 60
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=89.13 E-value=0.58 Score=46.64 Aligned_cols=77 Identities=14% Similarity=0.028 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhcC-CCh--HHHHHHHHHHHHHCCCcccccccccccc-CCCeEEEeecCcEEEEEEeCCcccCCCCeeE
Q 011000 58 SSIVGDLLDYLNES-WTP--FHATAEAKRLLIDAGFELLNENDEWELK-PGGGYFFTRNMSCLVAFAVGQKYSVGNGFHI 133 (496)
Q Consensus 58 ~~~a~~~~~Fl~~s-~T~--~h~v~~~~~~L~~~GF~~l~e~~~w~l~-~g~k~~~~r~g~~liA~~~G~~~~~~~g~~m 133 (496)
.++.+.+.+|-.+. .|+ ..+.+++.++|++.|++.. .+.+... +.+++ . ...||||...|+. ...+|
T Consensus 28 ~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~--~~~~~~~~~~g~~-~--~~~Nvia~~~g~~----~~~il 98 (309)
T 3tc8_A 28 YAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVY--QQEAILTAYDGTK-L--EARNIIGSFDPEN----SKRVL 98 (309)
T ss_dssp HHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEE--EEEEEEECTTSCE-E--EEEEEEEEESTTC----SSEEE
T ss_pred HHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEE--EEEeeccccCCCc-c--cceEEEEEECCCC----CceEE
Confidence 34555666665543 244 5589999999999999742 1222111 11221 1 1248999876642 34799
Q ss_pred EEEeccCCce
Q 011000 134 IAAHTDSPCL 143 (496)
Q Consensus 134 i~AH~Dspgl 143 (496)
++||+|+++.
T Consensus 99 l~aH~Dsv~~ 108 (309)
T 3tc8_A 99 LFAHWDSRPY 108 (309)
T ss_dssp EEEECCCCSC
T ss_pred EEecccCCCC
Confidence 9999999874
No 61
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=88.83 E-value=0.18 Score=53.31 Aligned_cols=76 Identities=14% Similarity=0.001 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHHHC-CCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEeccc--ccccccHhhhcCHHHHHHHHHHHHH
Q 011000 404 SGVTAFLFKEIAKLH-NLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIA--QLSMHSVREICGTEDIDIAYRHFKA 480 (496)
Q Consensus 404 ~~~~~~~l~~ia~~~-~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP--~l~MHS~rE~~~~~Dv~~~~~l~~a 480 (496)
|..+...+++++++. |++.+... .+|||.+.++.. +++...++ | .-.+|++.|-+..+|+..++++|..
T Consensus 412 d~~lv~~l~~a~~~~~G~~~~~~~-----~gggtDa~~~~~--~v~~G~~f-Pg~~~~~H~~dE~v~i~~l~~~~~i~~~ 483 (492)
T 3khx_A 412 NDPFVQKLVTAYRNQTNDMTEPYT-----IGGGTYARNLDK--GVAFGAMF-SDSEDLMHQKNEYITKKQLFNATSIYLE 483 (492)
T ss_dssp GCHHHHHHHHHHHTTCC-------------------------------------------CCSCEEEHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCCCeEEe-----eehhHHHHHhhC--ceEECCcC-CCCCCCCCCCccCcCHHHHHHHHHHHHH
Confidence 567788888888886 88766544 378887777653 56655444 5 3579999999999999999999999
Q ss_pred HHhhccc
Q 011000 481 FYESFSS 487 (496)
Q Consensus 481 f~~~~~~ 487 (496)
++..+..
T Consensus 484 ~l~~l~~ 490 (492)
T 3khx_A 484 AIYSLCV 490 (492)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 9987743
No 62
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=88.34 E-value=0.6 Score=45.62 Aligned_cols=57 Identities=23% Similarity=0.140 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCce
Q 011000 75 FHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCL 143 (496)
Q Consensus 75 ~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl 143 (496)
..+.+++++.|++.||+... +. .... ...+.||+|...|+++ ...+|++||+|+++.
T Consensus 35 ~~~~~~i~~~l~~~g~~v~~--~~--~~~~-----~~~~~nvi~~~~g~~~---~~~i~l~aH~D~v~~ 91 (284)
T 1tkj_A 35 KASVDYVKAKLDAAGYTTTL--QQ--FTSG-----GATGYNLIANWPGGDP---NKVLMAGAHLDSVSS 91 (284)
T ss_dssp HHHHHHHHHHHHHHTCEEEE--EE--EEET-----TEEEEEEEEECSCSEE---EEEEEEEEECCCCTT
T ss_pred HHHHHHHHHHHHHcCCeEEE--EE--eccC-----CCCceeEEEEEeCCCC---CCEEEEEeecCCCCC
Confidence 45899999999999986311 11 0000 0123489887656431 236999999999864
No 63
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=88.08 E-value=0.54 Score=49.06 Aligned_cols=60 Identities=13% Similarity=-0.047 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHCCCcccccccccc---ccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCc
Q 011000 75 FHATAEAKRLLIDAGFELLNENDEWE---LKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPC 142 (496)
Q Consensus 75 ~h~v~~~~~~L~~~GF~~l~e~~~w~---l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspg 142 (496)
+.+.+++++.|++.||+... +... +.++.+ ..+. .||+|...|+. ..+.+++.||+|.+.
T Consensus 46 ~~~~~~l~~~l~~~G~~~~~--~~~~~~~~~~~~~--~~~~-~~v~a~~~~~~---~~~~i~l~aH~D~vp 108 (479)
T 2zog_A 46 RRMMEVAAADVQRLGGSVEL--VDIGKQKLPDGSE--IPLP-PILLGKLGSDP---QKKTVCIYGHLDVQP 108 (479)
T ss_dssp HHHHHHHHHHHHHTTCEEEE--ECCCEEECTTSCE--EECC-CEEEEEECCCT---TSCEEEEEEECCBCC
T ss_pred HHHHHHHHHHHHHcCCeEEE--eeccccccCCCcc--cCCC-CEEEEEecCCC---CCCeEEEEEecCCCC
Confidence 67899999999999996311 1110 001110 0111 48998764321 134699999999875
No 64
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=87.42 E-value=0.35 Score=47.93 Aligned_cols=62 Identities=24% Similarity=0.257 Sum_probs=41.1
Q ss_pred ChHH--HHHHHHHHHHHCCCcccccccccccc-CCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCce
Q 011000 73 TPFH--ATAEAKRLLIDAGFELLNENDEWELK-PGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCL 143 (496)
Q Consensus 73 T~~h--~v~~~~~~L~~~GF~~l~e~~~w~l~-~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl 143 (496)
||=| |.++++++|++.|++.. .+.+... +... .....||||...|+. ...+||+||.|+.++
T Consensus 28 s~~~~~~~~~i~~~l~~~g~~v~--~~~f~~~~~~~~---~~~~~Nii~~~~~~~----~~~vvl~aHyDs~~~ 92 (312)
T 4f9u_A 28 SRGHQQVREYLVQSLNGLGFQTE--VDEFKQRVPVFG---ELTFANVVGTINPQA----QNFLALACHYDSKYF 92 (312)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEE--EEEEEEEETTTE---EEEEEEEEEEESTTS----SEEEEEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHHHCCCeEE--EEeEEEecCCCC---ceeEEEEEEEECCCC----CceEEEEEEEecCCC
Confidence 5545 78999999999999752 2334222 1111 123458999886653 347999999999754
No 65
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=87.26 E-value=0.93 Score=46.08 Aligned_cols=92 Identities=14% Similarity=0.182 Sum_probs=50.3
Q ss_pred HHHHHHHHHHh---cCCChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEE
Q 011000 59 SIVGDLLDYLN---ESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIA 135 (496)
Q Consensus 59 ~~a~~~~~Fl~---~s~T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~ 135 (496)
++.+.+.+++. -|.-++.+.+++++.|++.||+... ..... ..+ ...+ |++|...|+....+.+.+++.
T Consensus 25 ~~~~~l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~-~~~~~-~~~-----~~~~-nvia~~~g~~~~~~~~~i~l~ 96 (396)
T 3rza_A 25 RLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKE-DEAAK-HPK-----LGAN-NLVCTMNSTIEEGEVPKLYLT 96 (396)
T ss_dssp HHHHHHHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEE-CSGGG-STT-----CSSC-CEEEEECCCCC---CCCEEEE
T ss_pred HHHHHHHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEE-ecccc-ccC-----CCCc-eEEEEECCcCCCCCCCeEEEE
Confidence 34444444443 2334677999999999999997321 11100 011 1123 788877664100113469999
Q ss_pred EeccCC--ceeeeeCCCCCCCcEEEEE
Q 011000 136 AHTDSP--CLKLKPKSASSKSGRVIVR 160 (496)
Q Consensus 136 AH~Dsp--gl~VKpi~~~~~~G~V~~~ 160 (496)
||||.+ +..++|+.+ .+|+++-+
T Consensus 97 aH~D~vp~g~~~~p~~~--~~g~~~g~ 121 (396)
T 3rza_A 97 SHMDTVVPAINVKPIVK--DDGYIYSD 121 (396)
T ss_dssp EECCBCSSCSSCCCEEC--TTSEEECC
T ss_pred EECCccCCCCCcceEEe--cCCEEECC
Confidence 999987 444444321 23666543
No 66
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=87.08 E-value=0.46 Score=48.63 Aligned_cols=77 Identities=14% Similarity=0.001 Sum_probs=56.2
Q ss_pred cCHHHHHHHHHHHHHC--CCCEeEEEeccCCCCCCChHHHHhcCCCCcEE--Eecccc-cccccHhhhcCHHHHHHHHHH
Q 011000 403 TSGVTAFLFKEIAKLH--NLPTQEFVVRNDMGCGSTIGPILASGVGIRTV--DCGIAQ-LSMHSVREICGTEDIDIAYRH 477 (496)
Q Consensus 403 t~~~~~~~l~~ia~~~--~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~ti--diGiP~-l~MHS~rE~~~~~Dv~~~~~l 477 (496)
.|..+.+.+++.+++. |.+... ..+|||.+.+++.. +|++ -+|... ..+|++.|-++.+++...+++
T Consensus 320 ~~~~l~~~~~~~~~~~g~g~~~~~------~~~g~tD~~~~~~~--~p~~~~~~G~~~~~~~H~~~E~v~~~~l~~~~~~ 391 (404)
T 1ysj_A 320 NDGTFLNAASEAAARLGYQTVHAE------QSPGGEDFALYQEK--IPGFFVWMGTNGTEEWHHPAFTLDEEALTVASQY 391 (404)
T ss_dssp ECGGGHHHHHHHHHHTTCEEEECC------CBSSCCTHHHHHTT--SCEEEEEEECCCSSCTTCTTCCCCTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCccccc------cCCccchHHHHHHH--CCeEEEEEcCCCCCCCCCCCCcCCHHHHHHHHHH
Confidence 3555778899999998 433222 24677776666543 8876 556554 458999999999999999999
Q ss_pred HHHHHhhccc
Q 011000 478 FKAFYESFSS 487 (496)
Q Consensus 478 ~~af~~~~~~ 487 (496)
+..++..+-.
T Consensus 392 ~~~~~~~~~~ 401 (404)
T 1ysj_A 392 FAELAVIVLE 401 (404)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999877643
No 67
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=86.60 E-value=1.2 Score=44.67 Aligned_cols=61 Identities=16% Similarity=0.129 Sum_probs=38.8
Q ss_pred CCChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCC
Q 011000 71 SWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSP 141 (496)
Q Consensus 71 s~T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dsp 141 (496)
|.-++.+.+++++.|++.||+... +.-....+ ...+ |++|...|++. ..+.+++.||||.+
T Consensus 22 s~~e~~~~~~l~~~l~~~G~~v~~--~~~~~~~~-----~~~~-nv~a~~~g~~~--~~~~v~l~aH~D~v 82 (373)
T 3gb0_A 22 TKFEAEICKVLTKKFTDLGVEVFE--DDTMAVTG-----HGAG-NLICTLPATKD--GVDTIYFTSHMDTV 82 (373)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEE--CSCHHHHC-----CSSC-CEEEEECCSST--TCCCEEEEEECCBC
T ss_pred CccHHHHHHHHHHHHHHCCCEEEE--eccccccC-----CCce-eEEEEecCCCC--CCCEEEEEEECccc
Confidence 445778999999999999996321 11000000 0123 79888766521 13469999999998
No 68
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=86.55 E-value=0.72 Score=48.71 Aligned_cols=52 Identities=12% Similarity=-0.001 Sum_probs=37.1
Q ss_pred CCeeeccC-CCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCccccc
Q 011000 271 NEFIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 325 (496)
Q Consensus 271 ~e~I~s~~-LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~ 325 (496)
++++.|++ .||+.++.++|.|+..+.... . .....+.++|+..||+|+.|+.
T Consensus 128 ~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~--~-~~~~~i~~~~~~~EE~g~~g~~ 180 (492)
T 3khx_A 128 EDAIIARGTLDDKGPTIAAYYAIKILEDMN--V-DWKKRIHMIIGTDEESDWKCTD 180 (492)
T ss_dssp SSEEESTTTTTTHHHHHHHHHHHHHHHHTT--C-CCSSEEEEEEECCTTCCCCTTS
T ss_pred CCEEEecCCccCcHHHHHHHHHHHHHHHcC--C-CCCCCEEEEEECCccCCCcCHH
Confidence 34566765 599999999998887764321 1 1245688899999999997653
No 69
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=86.40 E-value=1.5 Score=44.75 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCce
Q 011000 74 PFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCL 143 (496)
Q Consensus 74 ~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl 143 (496)
++.+.+++++.|++.||+.. ++..| |++|...|+++ +.+.+++.+|||.+..
T Consensus 38 e~~~~~~i~~~l~~~G~~v~---------------~~~~g-nv~a~~~g~~~--~~~~i~l~~H~D~Vp~ 89 (423)
T 1z2l_A 38 WLETQQQFKKRMAASGLETR---------------FDEVG-NLYGRLNGTEY--PQEVVLSGSHIDTVVN 89 (423)
T ss_dssp HHHHHHHHHHHHHHTTCEEE---------------ECTTS-CEEEEECCSSE--EEEEEEEEEECCCCTT
T ss_pred HHHHHHHHHHHHHHcCCEEE---------------EecCC-cEEEEEcCCCC--CCCEEEEEEecCCCCC
Confidence 45679999999999999521 12235 78887656532 1236999999999864
No 70
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=85.86 E-value=1 Score=45.01 Aligned_cols=61 Identities=15% Similarity=0.047 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHHHCCCcccccccccccc-CCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCce
Q 011000 74 PFHATAEAKRLLIDAGFELLNENDEWELK-PGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCL 143 (496)
Q Consensus 74 ~~h~v~~~~~~L~~~GF~~l~e~~~w~l~-~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl 143 (496)
...+.++++++|++.|++.. .+.+... +.+++. ...||||...|+. ...+|++||+|+++.
T Consensus 49 ~~~~~~~l~~~l~~~G~~v~--~~~~~~~~~~g~~~---~~~Nvia~~~g~~----~~~ill~aH~Dsv~~ 110 (314)
T 3gux_A 49 HKECGEYLAGQLEKFGAKVY--NQYADLIAYDGTIL---KSRNIIGAYKPES----KKRILLCAHWDSRPY 110 (314)
T ss_dssp HHHHHHHHHHHHHHTTCEEE--EEEEEEECTTSCEE---EEEEEEEEESTTC----SSEEEEEEECCCCC-
T ss_pred HHHHHHHHHHHHHHCCCEEE--EEEeeccccCCCcc---cceEEEEEECCCC----CceEEEEccccCCCc
Confidence 34489999999999999642 1222111 112211 1248999876642 347999999999864
No 71
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=85.81 E-value=0.45 Score=49.54 Aligned_cols=74 Identities=19% Similarity=0.256 Sum_probs=54.2
Q ss_pred CHHHHHHHHHHHHH-CCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecc--c--ccccccHhhhcCHHHHHHHHHHH
Q 011000 404 SGVTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGI--A--QLSMHSVREICGTEDIDIAYRHF 478 (496)
Q Consensus 404 ~~~~~~~l~~ia~~-~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGi--P--~l~MHS~rE~~~~~Dv~~~~~l~ 478 (496)
|..+.+.+++.+++ .|.+..... .+|+|.+.++. |++.+|+ | .-.+|++.|-++.+|+...++++
T Consensus 388 d~~l~~~~~~a~~~~~g~~~~~~~-----~~g~~d~~~~~-----~~v~~G~~~pg~~~~~H~~~E~i~~~~l~~~~~~~ 457 (470)
T 1lfw_A 388 SDPMVQTLLKVYEKQTGKPGHEVV-----IGGGTYGRLFE-----RGVAFGAQPENGPMVMHAANEFMMLDDLILSIAIY 457 (470)
T ss_dssp TCHHHHHHHHHHHHHHCCCCCEEE-----ESSCCGGGGST-----TCEECCEECTTCCCCTTSTTCEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCceee-----ecCHhHHHhCC-----CeEEECCCCCCCCCCCCCCCcceEHHHHHHHHHHH
Confidence 55677777777776 566544332 25777665553 5677886 3 35689999999999999999999
Q ss_pred HHHHhhccc
Q 011000 479 KAFYESFSS 487 (496)
Q Consensus 479 ~af~~~~~~ 487 (496)
..++..+..
T Consensus 458 ~~~~~~l~~ 466 (470)
T 1lfw_A 458 AEAIYELTK 466 (470)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhc
Confidence 999887754
No 72
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=85.43 E-value=0.74 Score=47.85 Aligned_cols=47 Identities=15% Similarity=0.027 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCc
Q 011000 75 FHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPC 142 (496)
Q Consensus 75 ~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspg 142 (496)
+.+.+++++.|++.||+.. .+ .+..+++.. |+. .+.+++.+|+|.+.
T Consensus 46 ~~~~~~l~~~l~~~G~~~~----~~------------~~~~~~~~~-g~~----~~~i~l~~H~D~vp 92 (470)
T 1lfw_A 46 VDAMTKFLSFAKRDGFDTE----NF------------ANYAGRVNF-GAG----DKRLGIIGHMDVVP 92 (470)
T ss_dssp HHHHHHHHHHHHHTTCEEE----EE------------TTTEEEEEE-CCC----SSEEEEEEECCBCC
T ss_pred HHHHHHHHHHHHHcCCeEE----Ee------------cCeEEEEEe-CCC----CCeEEEEEeecccC
Confidence 6788999999999999631 11 011344432 532 23699999999874
No 73
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=84.73 E-value=1 Score=46.17 Aligned_cols=79 Identities=14% Similarity=-0.040 Sum_probs=57.2
Q ss_pred cCHHHHHHHHHHHHH-CCCC-EeEEEeccCCCCCCChHHHHhcCCCCcEEE--eccc-----ccccccHhhhcCHHHHHH
Q 011000 403 TSGVTAFLFKEIAKL-HNLP-TQEFVVRNDMGCGSTIGPILASGVGIRTVD--CGIA-----QLSMHSVREICGTEDIDI 473 (496)
Q Consensus 403 t~~~~~~~l~~ia~~-~~Ip-~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tid--iGiP-----~l~MHS~rE~~~~~Dv~~ 473 (496)
.|..+...+++.+++ .|.+ +.... ..+|||.+.+++. .+|++- +|.. .-.+|++.|-++.+++..
T Consensus 316 ~d~~l~~~~~~~~~~~~g~~~~~~~~----~~~g~tD~~~~~~--~~P~~~~~~G~~~~~~~~~~~H~~~E~i~~~~l~~ 389 (418)
T 1xmb_A 316 NNKDLYKQFKKVVRDLLGQEAFVEAA----PVMGSEDFSYFAE--TIPGHFSLLGMQDETNGYASSHSPLYRINEDVLPY 389 (418)
T ss_dssp ECHHHHHHHHHHHHHHHCGGGEEECC----CBCCCCTHHHHHT--TSCEEEEEEEEECTTCCSCCTTCTTCCCCGGGHHH
T ss_pred CCHHHHHHHHHHHHHhcCCcceeccC----CCCCcchHHHHHH--HCCEEEEEEeCCCCCCCCCCCCCCCCccCHHHHHH
Confidence 477888899999888 5765 21111 1357776666654 389854 5552 256899999999999999
Q ss_pred HHHHHHHHHhhccc
Q 011000 474 AYRHFKAFYESFSS 487 (496)
Q Consensus 474 ~~~l~~af~~~~~~ 487 (496)
.++++..++..+..
T Consensus 390 ~~~~~~~~~~~l~~ 403 (418)
T 1xmb_A 390 GAAIHASMAVQYLK 403 (418)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999998877643
No 74
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=84.19 E-value=0.81 Score=48.06 Aligned_cols=78 Identities=12% Similarity=0.044 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHH-CCCCEeEEEeccCCCCCCCh-HHHHhcCCCCcEEEeccc--ccccccHhhhcCHHHHHHHHHHHHHH
Q 011000 406 VTAFLFKEIAKL-HNLPTQEFVVRNDMGCGSTI-GPILASGVGIRTVDCGIA--QLSMHSVREICGTEDIDIAYRHFKAF 481 (496)
Q Consensus 406 ~~~~~l~~ia~~-~~Ip~Q~~~~r~D~~gG~Ti-g~i~~s~~Gi~tidiGiP--~l~MHS~rE~~~~~Dv~~~~~l~~af 481 (496)
.+.+.+++.+++ .|.+..... .+||.. +.+++...|++.+-+|+. --..|++.|-++.+|+...++++..+
T Consensus 403 ~~~~~~~~a~~~~~G~~~~~~~-----~ggs~Dfa~~~~~~~p~~~i~~g~g~~~~~~H~p~E~i~~~~l~~g~~~l~~~ 477 (485)
T 3dlj_A 403 TQYLAAKRAIRTVFGTEPDMIR-----DGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAF 477 (485)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEE-----ESSCCHHHHHHHHHTC--CEECCCBCTTCCTTSTTCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCceecC-----CCCchhHHHHHHHHhCCCEEEecCCCCCCCCcCCCCCccHHHHHHHHHHHHHH
Confidence 455555555555 355433221 244443 445554578888877763 34689999999999999999999999
Q ss_pred Hhhcccc
Q 011000 482 YESFSSI 488 (496)
Q Consensus 482 ~~~~~~~ 488 (496)
+..+.++
T Consensus 478 l~~la~~ 484 (485)
T 3dlj_A 478 FLEMAQL 484 (485)
T ss_dssp HHHHHTC
T ss_pred HHHHhhc
Confidence 9887653
No 75
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=84.17 E-value=1.2 Score=46.75 Aligned_cols=59 Identities=19% Similarity=0.143 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHCCCcccccccccccc-----CCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCce
Q 011000 75 FHATAEAKRLLIDAGFELLNENDEWELK-----PGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCL 143 (496)
Q Consensus 75 ~h~v~~~~~~L~~~GF~~l~e~~~w~l~-----~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl 143 (496)
..+.++++++|++.||+.. .+... .|..+ ....+|+|.. |+.. ..+.+++.||||.+..
T Consensus 53 ~~~~~~l~~~l~~~G~~~~----~~~~~~~~~~~g~~~---~~~~~v~a~~-~~~~--~~~~i~l~aH~D~vp~ 116 (485)
T 3dlj_A 53 FRMMAVAADTLQRLGARVA----SVDMGPQQLPDGQSL---PIPPVILAEL-GSDP--TKGTVCFYGHLDVQPA 116 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEE----EECCCEEEC--CCEE---ECCCEEEEEE-CCCT--TSCEEEEEEECCBCCC
T ss_pred HHHHHHHHHHHHHcCCeEE----EEecCcccccCCCcc---CCCcEEEEEE-CCCC--CCCEEEEEeeecCCCC
Confidence 5688999999999999732 11111 11111 1123788865 4321 1346999999998743
No 76
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=84.01 E-value=1.8 Score=43.37 Aligned_cols=65 Identities=15% Similarity=0.078 Sum_probs=41.6
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEecc
Q 011000 60 IVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTD 139 (496)
Q Consensus 60 ~a~~~~~Fl~~s~T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~D 139 (496)
+.++|+.+=.-|..+..+.+++++.|++.||..+. + ++.+.+++|...|+. .+.+++.||||
T Consensus 18 ~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~------~--------~~~~~~~~a~~~~~~----~~~v~l~~H~D 79 (369)
T 3tx8_A 18 LTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVE------V--------FRFNNNVLARTNRGL----ASRVMLAGHID 79 (369)
T ss_dssp HHHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCE------E--------EEETTEEEEECCCCC----SCEEEEEEECC
T ss_pred HHHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcE------E--------eccCCcEEEEecCCC----CCeEEEEcccC
Confidence 33444433333445678899999999999996221 1 122447888654431 23699999999
Q ss_pred CCc
Q 011000 140 SPC 142 (496)
Q Consensus 140 spg 142 (496)
.+.
T Consensus 80 ~vp 82 (369)
T 3tx8_A 80 TVP 82 (369)
T ss_dssp BSC
T ss_pred ccC
Confidence 875
No 77
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=83.19 E-value=2.3 Score=44.80 Aligned_cols=56 Identities=11% Similarity=-0.057 Sum_probs=37.9
Q ss_pred ChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCcee
Q 011000 73 TPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLK 144 (496)
Q Consensus 73 T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl~ 144 (496)
.+..+.+++++.|++.||+.. .+..| |++|...|.....+.+.+++.||||.+...
T Consensus 32 ~e~~~~~~l~~~l~~~G~~v~---------------~~~~~-nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~ 87 (490)
T 3mru_A 32 HEEALAQYIVTWATEQGFDVR---------------RDPTG-NVFIKKPATPGMENKKGVVLQAHIDMVPQK 87 (490)
T ss_dssp CCTTHHHHHHHHHHHTTCEEE---------------ECTTC-CEEEEECCCTTCTTCCCEEEEEECCBCCCB
T ss_pred CHHHHHHHHHHHHHHcCCEEE---------------EcCCC-eEEEEEcCCCCCCCCCeEEEEeccCCCCCC
Confidence 456799999999999999631 12234 788877653100123469999999987543
No 78
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=82.27 E-value=1.5 Score=44.30 Aligned_cols=59 Identities=19% Similarity=0.198 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHC--CCccccccccccc-cCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCce
Q 011000 75 FHATAEAKRLLIDA--GFELLNENDEWEL-KPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCL 143 (496)
Q Consensus 75 ~h~v~~~~~~L~~~--GF~~l~e~~~w~l-~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl 143 (496)
..+.+++++.|++. |++.. .+.... .+.+ .....||||...|+. ...+|++||+|+..+
T Consensus 61 ~~a~~~l~~~l~~~~~g~~v~--~d~f~~~~~~g----~~~~~Nvia~~~g~~----~~~ivl~aH~Dsv~~ 122 (330)
T 3pb6_X 61 LQVRKFLEATLRSLTAGWHVE--LDPFTASTPLG----PVDFGNVVATLDPRA----ARHLTLACHYDSKLF 122 (330)
T ss_dssp HHHHHHHHHHHHHSTTCCEEE--EEEEEEEETTE----EEEEEEEEEESCTTS----SEEEEEEEECCCCCC
T ss_pred HHHHHHHHHHHHHhCCCCeEE--EEeeecccccC----CccceEEEEEECCCC----CceEEEEeccCCCCC
Confidence 44789999999998 66421 122111 1111 122248999876653 347999999999854
No 79
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=81.99 E-value=4 Score=41.50 Aligned_cols=76 Identities=18% Similarity=0.121 Sum_probs=54.2
Q ss_pred cCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCChHHHHhcCCCCcEEEecccc----cccccHhhhc-------CHHHH
Q 011000 403 TSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ----LSMHSVREIC-------GTEDI 471 (496)
Q Consensus 403 t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~----l~MHS~rE~~-------~~~Dv 471 (496)
.|+.+.+.+++.+++.|.++.. ....+|||.+.+.+ .++|++.+.+++ -..|++ |.. +.+++
T Consensus 286 ~d~~l~~~~~~a~~~~G~~~~~----~~~~~g~~D~~~~~--~~~P~~~~~~g~~~~~~~~H~~-ef~~~~~~~~~~~~l 358 (394)
T 3ram_A 286 KTPKLDDLFAKYAEEVGEAVID----DDFGYGSTDTGNVS--HVVPTIHPHIKIGSRNLVGHTH-RFREAAASVHGDEAL 358 (394)
T ss_dssp CCHHHHHHHHHHHHHTTCCBCC----SCCCCBCCTHHHHT--TTSCBCCCEEECSCTTCCTTSH-HHHHHTTSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCccccc----CCCCcccccHHHHH--HHhchheEEeeecCCCCCCCCH-HHHhccCCCccHHHH
Confidence 4788899999999998844311 11246777766665 469998775444 368999 664 88899
Q ss_pred HHHHHHHHHHHhhc
Q 011000 472 DIAYRHFKAFYESF 485 (496)
Q Consensus 472 ~~~~~l~~af~~~~ 485 (496)
...++++..+...+
T Consensus 359 ~~g~~~la~~~~~~ 372 (394)
T 3ram_A 359 IKGAKIMALMGLEL 372 (394)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999888887655
No 80
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=81.97 E-value=0.96 Score=47.33 Aligned_cols=50 Identities=20% Similarity=0.152 Sum_probs=36.3
Q ss_pred CeeeccCC-CchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCccccc
Q 011000 272 EFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 325 (496)
Q Consensus 272 e~I~s~~L-DNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~ 325 (496)
+.+.|++- ||+.++.++|.|+..+.... . ... .+.++|...||+|+.|+.
T Consensus 121 g~~~grG~~D~K~~~a~~l~a~~~l~~~~--~-~~~-~v~~~~~~~EE~g~~g~~ 171 (472)
T 3pfe_A 121 GLLYGRGGADDGYSAYASLTAIRALEQQG--L-PYP-RCILIIEACEESGSYDLP 171 (472)
T ss_dssp TEEESTTCCCCCHHHHHHHHHHHHHHHTT--C-CCE-EEEEEEESCGGGTSTTHH
T ss_pred CEEEEeCcccCcHHHHHHHHHHHHHHHcC--C-CCC-cEEEEEEeCCCCCChhHH
Confidence 46777776 99999999998877664221 1 123 678889999999987644
No 81
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=81.20 E-value=1.2 Score=42.89 Aligned_cols=66 Identities=17% Similarity=0.137 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEec
Q 011000 59 SIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHT 138 (496)
Q Consensus 59 ~~a~~~~~Fl~~s~T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~ 138 (496)
++.++|+.+=.-|+.+..+.+++++.|++.||+... + ..+ .. .|++|.. |.. .+.+++.+|+
T Consensus 10 ~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~----~--~~~------~~-~nv~a~~-g~~----~~~i~l~~H~ 71 (268)
T 3t68_A 10 ALAKELISRQSVTPADAGCQDLMIERLKALGFEIES----M--VFE------DT-TNFWARR-GTQ----SPLFVFAGHT 71 (268)
T ss_dssp HHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECC----C--EET------TE-EC-CEEE-CSS----SCEEEEEEEC
T ss_pred HHHHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEE----E--ecC------Cc-cEEEEEe-CCC----CCeEEEEccc
Confidence 344444444344555677899999999999997421 1 111 11 2688765 642 2369999999
Q ss_pred cCCc
Q 011000 139 DSPC 142 (496)
Q Consensus 139 Dspg 142 (496)
|.+.
T Consensus 72 D~vp 75 (268)
T 3t68_A 72 DVVP 75 (268)
T ss_dssp CBCC
T ss_pred cccC
Confidence 9874
No 82
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=80.98 E-value=2.5 Score=43.12 Aligned_cols=49 Identities=27% Similarity=0.177 Sum_probs=36.9
Q ss_pred CeeeccC-----CCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCccccc
Q 011000 272 EFIFSGR-----LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 325 (496)
Q Consensus 272 e~I~s~~-----LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~ 325 (496)
.++.|.+ .||+.++.++|.++..+.... . ....++++|+.+||+| +|+.
T Consensus 127 ~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~~-~---~~~~v~~~~~~~EE~g-~Ga~ 180 (417)
T 1fno_A 127 TLITTDGKTLLGADDKAGVAEIMTALAVLKGNP-I---PHGDIKVAFTPDEEVG-KGAK 180 (417)
T ss_dssp CEEECCSSSCCCHHHHHHHHHHHHHHHHHHSSS-C---CCCCEEEEEESCGGGT-CTTT
T ss_pred cEEEcCCccccccccHHhHHHHHHHHHHHHhCC-C---CCCcEEEEEEeccccC-CChh
Confidence 4566666 999999999999998875421 1 2456889999999998 5553
No 83
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=80.88 E-value=1.2 Score=44.47 Aligned_cols=52 Identities=12% Similarity=0.093 Sum_probs=36.0
Q ss_pred CCeeeccCC-CchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCc-cccc
Q 011000 271 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS-DSYQ 325 (496)
Q Consensus 271 ~e~I~s~~L-DNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs-~ga~ 325 (496)
++++.|.+. |++.++.+++.++..+..... ..+..+.++|+..||+|+ .|+.
T Consensus 90 ~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~---~~~~~v~~~~~~~EE~~~~~G~~ 143 (377)
T 3isz_A 90 DGMLYGRGAADMKGSLAAMIVAAEEYVKANP---NHKGTIALLITSDEEATAKDGTI 143 (377)
T ss_dssp TTEEESTTTTTTHHHHHHHHHHHHHHHHHCT---TCSSEEEEEEESCSSSCCSSSHH
T ss_pred CCEEEeCChhhhhHHHHHHHHHHHHHHHhCC---CCCceEEEEEEcccccCccccHH
Confidence 346778887 999999998887665432100 124567889999999986 3544
No 84
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=80.37 E-value=1.2 Score=44.78 Aligned_cols=61 Identities=16% Similarity=0.215 Sum_probs=40.0
Q ss_pred ChHH--HHHHHHHHHHHCCCccccccccccc-cCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCc
Q 011000 73 TPFH--ATAEAKRLLIDAGFELLNENDEWEL-KPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPC 142 (496)
Q Consensus 73 T~~h--~v~~~~~~L~~~GF~~l~e~~~w~l-~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspg 142 (496)
||=| |.+++++.|++.|++.. .+.+.. .+... ...+.||||...|+. ...+||+||.||.+
T Consensus 55 s~~~~~~~~~i~~~l~~~g~~v~--~q~f~~~~~~~~---~~~~~Nii~~~~~~~----~~~i~l~aHyDs~~ 118 (330)
T 4fai_A 55 TTNHSIVREYIVQSLRDLDWDVE--VNSFHDHAPIKG---KLHFHNIIATLNPNA----ERYLVLSCHYDSKY 118 (330)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEE--EEEEEEEETTTE---EEEEEEEEEESCTTC----SEEEEEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHHHCCCEEE--EeeeeeecCCCC---ceeEEEEEEEECCCC----CcEEEEEEeecccc
Confidence 6655 79999999999998742 233321 12111 123468999765542 34799999999964
No 85
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=80.16 E-value=1.3 Score=44.98 Aligned_cols=52 Identities=13% Similarity=0.100 Sum_probs=35.6
Q ss_pred CCeeeccCC-CchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCc-cccc
Q 011000 271 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGS-DSYQ 325 (496)
Q Consensus 271 ~e~I~s~~L-DNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs-~ga~ 325 (496)
++.+.|++- |++.++.++|.|+..+..... .....+.++|+..||+|+ .|+.
T Consensus 93 ~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~---~~~~~v~~~~~~~EE~~~~~Ga~ 146 (393)
T 1vgy_A 93 DGRLYGRGAADMKTSIACFVTACERFVAKHP---NHQGSIALLITSDEEGDALDGTT 146 (393)
T ss_dssp TTEEESTTTTTTHHHHHHHHHHHHHHHHHCT---TCSSEEEEEEESCSSSCCTTSHH
T ss_pred CCEEEecCcccchHHHHHHHHHHHHHHHhcC---CCCCcEEEEEEeccccCCcCCHH
Confidence 346777777 999999988877765532100 124568889999999863 4443
No 86
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=79.85 E-value=4.1 Score=42.60 Aligned_cols=57 Identities=11% Similarity=-0.119 Sum_probs=37.7
Q ss_pred CCChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCce
Q 011000 71 SWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCL 143 (496)
Q Consensus 71 s~T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl 143 (496)
+..++.+.+++++.|++.||+.. ++..| |++|...|+......+.+++.||||.+..
T Consensus 27 s~~e~~~~~~l~~~l~~~G~~~~---------------~~~~~-nv~a~~~g~~g~~~~~~i~l~aH~D~vp~ 83 (487)
T 2qyv_A 27 SYKEEQLAQFIINWAKTKGFFAE---------------RDEVG-NVLIRKPATVGMENRKPVVLQAHLDMVPQ 83 (487)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEE---------------ECTTC-CEEEEECCCTTCTTBCCEEEEEESCBCCC
T ss_pred CCcHHHHHHHHHHHHHHcCCEEE---------------EcCCC-cEEEEeCCCCCCCCCCeEEEEccCCccCC
Confidence 33468899999999999998631 11234 78887655310011236999999998753
No 87
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=79.38 E-value=1.5 Score=43.08 Aligned_cols=59 Identities=17% Similarity=0.115 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHCCCccccccccccccCCCeEEEe-ecCcEEEEEEeCCcccCCCCeeEEEEeccCCc
Q 011000 75 FHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFT-RNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPC 142 (496)
Q Consensus 75 ~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~-r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspg 142 (496)
..+.++++++|++.|+.. . . +.+. .+-.. ....||+|...|+.. ....+|++||+|++.
T Consensus 43 ~~~~~~l~~~l~~~g~~~-~--~-~~~~---~~~~~~~~~~nvi~~~~g~~~--~~~~v~l~aH~D~v~ 102 (299)
T 1rtq_A 43 AQASDWIASEWQALSASL-P--N-ASVK---QVSHSGYNQKSVVMTITGSEA--PDEWIVIGGHLDSTI 102 (299)
T ss_dssp HHHHHHHHHHHHHHHTTS-T--T-EEEE---EEEETTEEEEEEEEEECCSSE--EEEEEEEEEECCCCS
T ss_pred HHHHHHHHHHHHHhcCCc-c--c-ceee---eeccCCCCCceEEEEEECCCC--CCCEEEEEeccccCC
Confidence 347889999999987531 1 0 1011 11000 112389987766531 123699999999975
No 88
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=78.67 E-value=2.1 Score=43.58 Aligned_cols=57 Identities=14% Similarity=0.001 Sum_probs=39.4
Q ss_pred cCCChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCc
Q 011000 70 ESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPC 142 (496)
Q Consensus 70 ~s~T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspg 142 (496)
-|.-++.+.+++++.|++.||+... + ..| ++.|++|...|+++ .+.+++.||||.+.
T Consensus 31 ~s~~E~~~~~~i~~~l~~~G~~v~~--~----~~g-------~~~~via~~~g~~~---g~~i~l~ah~D~vp 87 (394)
T 3ram_A 31 LGNEEIFASRTLIDRLKEHDFEIET--E----IAG-------HATGFIATYDSGLD---GPAIGFLAEYDALP 87 (394)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEE--E----ETT-------EEEEEEEEEECSSS---SCEEEEEECCCCCT
T ss_pred CCcchHHHHHHHHHHHHHcCCeEEe--C----CCC-------CceEEEEEEeCCCC---CCEEEEEEecccCC
Confidence 3455788999999999999997311 1 111 12378887666532 24699999999975
No 89
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=77.56 E-value=1.9 Score=41.50 Aligned_cols=55 Identities=20% Similarity=0.075 Sum_probs=36.9
Q ss_pred cCCChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCc
Q 011000 70 ESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPC 142 (496)
Q Consensus 70 ~s~T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspg 142 (496)
-|+.+..+.++++++|++.||+... +.. + ..+ |++|.. |+. .+.+++.+|+|.+.
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~----~~~--~------~~~-nv~a~~-g~~----~~~i~l~~H~D~vp 75 (269)
T 4h2k_A 21 ISPNDEGCQQIIAERLEKLGFQIEW----MPF--N------DTL-NLWAKH-GTS----EPVIAFAGHTDVVP 75 (269)
T ss_dssp BTTCCTTHHHHHHHHHHTTTCEEEE----CCB--T------TBC-EEEEEE-CSS----SCEEEEEEECCBCC
T ss_pred CCCCcHHHHHHHHHHHHHcCCeEEE----EEc--C------Cce-EEEEEe-CCC----CCEEEEEeeecccC
Confidence 3444566899999999999997421 111 1 123 788865 642 33699999999874
No 90
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=76.91 E-value=0.87 Score=45.86 Aligned_cols=52 Identities=15% Similarity=0.151 Sum_probs=35.7
Q ss_pred CCeeeccCC-CchhhHHHHHHHHHHcCCCCCCCCCC---Cce--EEEEEEeccccC-ccccc
Q 011000 271 NEFIFSGRL-DNLASSYCGLRALIDSCVSPSNLSSE---HAI--RMVALFDNEEVG-SDSYQ 325 (496)
Q Consensus 271 ~e~I~s~~L-DNr~~~~~~leal~~~~~~~~~l~~~---~~~--~~~v~~dqEEVG-s~ga~ 325 (496)
++++.|++. |++.++.++|.++..+... .+ .. ... +.++|+..||+| ..|+.
T Consensus 90 ~g~~~grG~~D~k~~~a~~l~a~~~l~~~--~~-~~~~~~g~~~v~~~~~~~EE~~g~~G~~ 148 (364)
T 2rb7_A 90 NDRLYGRGANDDKYAVALGLVMFRDRLNA--LK-AAGRSQKDMALGLLITGDEEIGGMNGAA 148 (364)
T ss_dssp TTEEESTTTTTTHHHHHHHHHHHHHHHHH--HH-HTTCCGGGCCEEEEEESCGGGTSTTTHH
T ss_pred CCEEEecccccccHHHHHHHHHHHHHHHh--CC-CCcccCCCccEEEEEEeccccCchhhHH
Confidence 346778876 9999999999888766421 01 01 235 888999999985 35543
No 91
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=75.66 E-value=1.8 Score=43.54 Aligned_cols=39 Identities=13% Similarity=0.024 Sum_probs=31.0
Q ss_pred cCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEecccc-Cccccc
Q 011000 277 GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEV-GSDSYQ 325 (496)
Q Consensus 277 ~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEV-Gs~ga~ 325 (496)
...||+.++.++|.++... ...+.++|+..||+ |+.|+.
T Consensus 103 G~~D~k~g~a~~l~a~~~~----------~~~v~~~~~~~EE~~g~~G~~ 142 (369)
T 2f7v_A 103 GVCDIKGAAAALVAAANAG----------DGDAAFLFSSDEEANDPRCIA 142 (369)
T ss_dssp TTTTTHHHHHHHHHHHTTC----------CCCEEEEEESCTTSSSCCHHH
T ss_pred ccccccHHHHHHHHHHhcC----------CCCEEEEEEeCcccCCCcCHH
Confidence 3589999999999987651 23578899999999 777655
No 92
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=73.26 E-value=2.6 Score=42.16 Aligned_cols=50 Identities=8% Similarity=0.005 Sum_probs=35.4
Q ss_pred ChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCC
Q 011000 73 TPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSP 141 (496)
Q Consensus 73 T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dsp 141 (496)
-++.+.+++++.|++.||+.. .+ .+ |++|...|++. ..+.+++.||+|.+
T Consensus 29 ~e~~~~~~l~~~l~~~g~~~~---------------~~-~~-nv~a~~~g~~~--~~~~i~l~aH~D~v 78 (356)
T 3ct9_A 29 EETQAADFLQNYIEAEGMQTG---------------RK-GN-NVWCLSPMFDL--KKPTILLNSHIDTV 78 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCEE---------------EE-TT-EEEEECSSCCT--TSCEEEEEEECCBC
T ss_pred ChHHHHHHHHHHHHHCCCeEE---------------EE-ee-eEEEEEecCCC--CCCeEEEEcccccc
Confidence 357799999999999999631 01 34 88886545221 12469999999997
No 93
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=73.25 E-value=8.2 Score=39.35 Aligned_cols=50 Identities=10% Similarity=0.087 Sum_probs=35.3
Q ss_pred ChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCC
Q 011000 73 TPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSP 141 (496)
Q Consensus 73 T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dsp 141 (496)
-+..+.++++++|++.||+.. . +..+.|++|...|+++ +.+++.||+|.+
T Consensus 46 ~e~~~~~~l~~~l~~~G~~v~----~-----------~~~~~~l~a~~~~~~~----~~i~l~aH~D~v 95 (418)
T 1xmb_A 46 EELETSKLIRSELELIGIKYR----Y-----------PVAITGVIGYIGTGEP----PFVALRADMDAL 95 (418)
T ss_dssp CCHHHHHHHHHHHHHHTCCEE----E-----------EETTTEEEEEEESSSS----CEEEEEEECCCB
T ss_pred ChHHHHHHHHHHHHHcCCeeE----e-----------ccCCcEEEEEEcCCCC----CEEEEEeccccc
Confidence 356789999999999999631 0 1112378887655431 369999999985
No 94
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=72.94 E-value=6.4 Score=41.07 Aligned_cols=50 Identities=10% Similarity=-0.071 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCc
Q 011000 74 PFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPC 142 (496)
Q Consensus 74 ~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspg 142 (496)
++.+.+++++.|++.||+.. ++..| |++|...|+.+ .+.+++.+|+|.+.
T Consensus 69 e~~~~~~l~~~l~~~G~~v~---------------~d~~g-nvia~~~g~~~---~~~i~l~~H~DtVp 118 (474)
T 2v8h_A 69 DGAMRDWFTNECESLGCKVK---------------VDKIG-NMFAVYPGKNG---GKPTATGSHLDTQP 118 (474)
T ss_dssp HHHHHHHHHHHHHHTTCEEE---------------EBTTC-CEEEEECCSSC---CSCEEEEECCCCCS
T ss_pred HHHHHHHHHHHHHHcCCEEE---------------EecCc-eEEEEECCCCC---CCeEEEEEecccCC
Confidence 45679999999999999521 12235 78886655432 22699999999874
No 95
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=72.89 E-value=15 Score=36.90 Aligned_cols=50 Identities=16% Similarity=0.018 Sum_probs=34.4
Q ss_pred eeeccC-CCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCccccc
Q 011000 273 FIFSGR-LDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQ 325 (496)
Q Consensus 273 ~I~s~~-LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~ 325 (496)
++.|++ .||+.++.++|.++..+.... . .....+.++|+..||+|+.|+.
T Consensus 111 ~l~grG~~D~k~~~a~~l~a~~~l~~~~--~-~~~~~v~~~~~~~EE~g~~G~~ 161 (393)
T 1cg2_A 111 KAYGPGIADDKGGNAVILHTLKLLKEYG--V-RDYGTITVLFNTDEEKGSFGSR 161 (393)
T ss_dssp EEECTTTTTTHHHHHHHHHHHHHHHHTT--C-CCSSEEEEEEESCGGGTTTTTH
T ss_pred EEEcCCcccchHHHHHHHHHHHHHHhcC--C-CCCCCEEEEEEcccccCCccHH
Confidence 455555 699999999888887664321 1 1234678889999999887654
No 96
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=70.79 E-value=7.8 Score=39.47 Aligned_cols=66 Identities=12% Similarity=-0.030 Sum_probs=38.6
Q ss_pred ChHHHHHHHHHHHHHCCCccccc-cccccccCCCeE------EEeecCcEEEEEEeCCcccCCCCeeEEEEeccCCc
Q 011000 73 TPFHATAEAKRLLIDAGFELLNE-NDEWELKPGGGY------FFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPC 142 (496)
Q Consensus 73 T~~h~v~~~~~~L~~~GF~~l~e-~~~w~l~~g~k~------~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dspg 142 (496)
.+..+.++++++|++.||+.... .+...++....+ ..+. ..||+|...|+.. .+.+++.||||.+.
T Consensus 44 ~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~via~~~g~~~---~~~v~l~aH~D~vp 116 (433)
T 3pfo_A 44 EEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAG-SMQVVATADSDGK---GRSLILQGHIDVVP 116 (433)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGG-CEEEEEEECCCCC---SCCEEEEEECCBCC
T ss_pred CHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCC-CcEEEEEEecCCC---CCEEEEEcccCCcC
Confidence 46779999999999999974211 000011100001 0122 2489988765431 23699999999763
No 97
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=68.70 E-value=8.4 Score=39.09 Aligned_cols=52 Identities=19% Similarity=0.187 Sum_probs=36.3
Q ss_pred ChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEEEEeccCC
Q 011000 73 TPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSP 141 (496)
Q Consensus 73 T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi~AH~Dsp 141 (496)
-+..+.++++++|++.||+... + ..+ +.|++|...|++. .+.+++.+|+|.+
T Consensus 50 ~e~~~~~~l~~~l~~~G~~v~~--~----~~~--------~~nv~a~~~g~~~---~~~i~l~~H~D~v 101 (404)
T 1ysj_A 50 QEVETTKKIRRWLEEEQIEILD--V----PQL--------KTGVIAEIKGRED---GPVIAIRADIDAL 101 (404)
T ss_dssp CCHHHHHHHHHHHHHTTCEECC--C----TTC--------SSCEEEEEECSSC---CCEEEEEEECCCB
T ss_pred ChHHHHHHHHHHHHHcCCceEE--e----ccC--------CceEEEEEeCCCC---CCEEEEEEecccc
Confidence 4577999999999999996311 1 111 2378887666431 2469999999986
No 98
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=66.51 E-value=5.5 Score=39.64 Aligned_cols=49 Identities=14% Similarity=0.159 Sum_probs=31.5
Q ss_pred CChHHHHhcCCCCcEEEeccc--ccccccHhhhcC---HHHHHHHHHHHHHHHhhc
Q 011000 435 STIGPILASGVGIRTVDCGIA--QLSMHSVREICG---TEDIDIAYRHFKAFYESF 485 (496)
Q Consensus 435 ~Tig~i~~s~~Gi~tidiGiP--~l~MHS~rE~~~---~~Dv~~~~~l~~af~~~~ 485 (496)
|+-.++.. .|||++++..- -.+-||+.-+.+ ..-+....+++.+|+-+|
T Consensus 273 sDh~~F~~--~GiP~~~~~~~~~~~~yHt~~Dt~~~ld~~~l~~~~~~~~~~v~ey 326 (329)
T 2afw_A 273 DDHIPFLR--RGVPVLHLIPSPFPEVWHTMDDNEENLDESTIDNLNKILQVFVLEY 326 (329)
T ss_dssp STTHHHHT--TTCCEEEECCSSCCTTTTSTTCSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHhHHH--CCCCEEEEEcCCCCCCCCCCCCchhhCCHHHHHHHHHHHHHHHHHH
Confidence 44566665 39999988742 146799976654 455556666677775443
No 99
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=64.94 E-value=20 Score=37.35 Aligned_cols=155 Identities=9% Similarity=-0.048 Sum_probs=86.6
Q ss_pred cCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHhhh
Q 011000 277 GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECT 356 (496)
Q Consensus 277 ~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~~~ 356 (496)
.+=||..|+.++++....++.. + ...+..++|++ |.+||. .++.. ......
T Consensus 193 ~ANDNaSG~a~lleLar~l~~~----~-~~~t~rFvf~p-g~iGS~-------~yl~~--------------~~~~l~-- 243 (435)
T 3k9t_A 193 MCNDNLSGVALITFIAKALSKL----K-TKYSYRFLFAP-ETIGSI-------TWLSR--------------NEDKLK-- 243 (435)
T ss_dssp CTTTTHHHHHHHHHHHHHHTTS----C-CSSEEEEEEEC-TTHHHH-------HHHHH--------------CGGGGG--
T ss_pred CCCccchHHHHHHHHHHHHhcC----C-CCceEEEEEcC-ccHHHH-------HHHHh--------------ChHhhh--
Confidence 3789999999999877666532 1 34455566665 777765 11111 000010
Q ss_pred cccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEEeccCCCCCCC
Q 011000 357 IRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGST 436 (496)
Q Consensus 357 l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~~r~D~~gG~T 436 (496)
+--..|.+||-.... .+.++....+ |...-..++.+++..+-+++..... +.||+
T Consensus 244 -~i~a~lnLDmVGd~~-----------------~~~y~~sr~g----~~~~d~~~~~vl~~~~~~~~~~~f~---~~GSD 298 (435)
T 3k9t_A 244 -NIKMGLVATCVGDAG-----------------IKNYKRTKFG----DAEIDKIVEKVLMHCGSEYYVADFF---PWGSD 298 (435)
T ss_dssp -GEEEEEECCSCCSSS-----------------CEEEECCTTS----SSHHHHHHHHHHHHSSSCEEEECCC---SCSST
T ss_pred -ceEEEEEEEEecCCC-----------------CceeecCCCC----ChHHHHHHHHHHhhcCCCCceecCC---CCCCc
Confidence 112468888765321 2333322111 2223344555666667777765432 36777
Q ss_pred hHHHHhcCCCCcEEEecc---cccccccHhhhc---CHHHHHHHHHHHHHHHhhc
Q 011000 437 IGPILASGVGIRTVDCGI---AQLSMHSVREIC---GTEDIDIAYRHFKAFYESF 485 (496)
Q Consensus 437 ig~i~~s~~Gi~tidiGi---P~l~MHS~rE~~---~~~Dv~~~~~l~~af~~~~ 485 (496)
=-++.+....||++.+.- |-.+.|++.-.. +.+=++.+.+++...++.+
T Consensus 299 h~qF~spG~dIPv~~~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i~~L 353 (435)
T 3k9t_A 299 ERQFSSPGINLSVGSLMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTI 353 (435)
T ss_dssp HHHHTSTTTCCCEEEEESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred chhHhhCCCCCCEEEEecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHHHHh
Confidence 777777655599998874 223599987554 4455555555555555443
No 100
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=61.49 E-value=7.1 Score=40.34 Aligned_cols=84 Identities=15% Similarity=0.060 Sum_probs=48.1
Q ss_pred ccCHHHHHHHHHHHHHC-CCCEeEEEeccCCCCCCChHHHHhcCC---CCcE--EEeccc-ccccccHhhhcCHHHHHHH
Q 011000 402 ATSGVTAFLFKEIAKLH-NLPTQEFVVRNDMGCGSTIGPILASGV---GIRT--VDCGIA-QLSMHSVREICGTEDIDIA 474 (496)
Q Consensus 402 ~t~~~~~~~l~~ia~~~-~Ip~Q~~~~r~D~~gG~Tig~i~~s~~---Gi~t--idiGiP-~l~MHS~rE~~~~~Dv~~~ 474 (496)
..|+.+.+.+++.+++. |.+.... .....+|||.+.+.+... |.|+ +-+|.. .-.+|++.|-++.+++...
T Consensus 343 ~~d~~l~~~~~~a~~~~~g~~~v~~--~~~~~~g~~D~~~~~~~~P~~gg~~~~~~~G~~~~~~~H~~~E~i~~~~l~~g 420 (445)
T 3io1_A 343 APSPAWVDYLREQAARVPGVQQAVD--RIAAPAGSEDATLMMARVQARGGLASYMIFGTELSAGHHNEKFDFDESVMAVA 420 (445)
T ss_dssp CCCHHHHHHHHHHHHHSTTCCBCBS--SCCCCCBCCTHHHHHHHHHHTTCEEEEEEEEEEC-----------CCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCcccee--cCCCCccHHHHHHHHHHhcccCCceEEEEEeCCCCCCCCCCCCcCCHHHHHHH
Confidence 34788889999999987 5642110 001126777665555431 2333 556653 2468999999999999999
Q ss_pred HHHHHHHHhhccc
Q 011000 475 YRHFKAFYESFSS 487 (496)
Q Consensus 475 ~~l~~af~~~~~~ 487 (496)
++++..++.+|-.
T Consensus 421 ~~~~~~~~~~~~~ 433 (445)
T 3io1_A 421 VETLARVALNFPW 433 (445)
T ss_dssp HHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887754
No 101
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=60.71 E-value=21 Score=36.67 Aligned_cols=31 Identities=19% Similarity=0.432 Sum_probs=22.5
Q ss_pred HHHHHHHhcCCChHHHHHHHHHHHHHCCCcc
Q 011000 62 GDLLDYLNESWTPFHATAEAKRLLIDAGFEL 92 (496)
Q Consensus 62 ~~~~~Fl~~s~T~~h~v~~~~~~L~~~GF~~ 92 (496)
++|..+=.-+.-++.+.+++++.|++.||+.
T Consensus 21 ~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v 51 (445)
T 3io1_A 21 RDFHLHAESGWLEFRTASKVADILDGLGYQL 51 (445)
T ss_dssp HHHHHTCCCTTCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHCCCeE
Confidence 3333333344568899999999999999974
No 102
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=36.79 E-value=31 Score=35.21 Aligned_cols=31 Identities=23% Similarity=0.130 Sum_probs=22.1
Q ss_pred CcEEEEEEeCCcc-cCCCCeeEEEEeccCCce
Q 011000 113 MSCLVAFAVGQKY-SVGNGFHIIAAHTDSPCL 143 (496)
Q Consensus 113 g~~liA~~~G~~~-~~~~g~~mi~AH~Dspgl 143 (496)
..||||...|.++ ......+|++||+|+.+.
T Consensus 203 ~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~ 234 (421)
T 2ek8_A 203 SHNVIATKKPDANKKNTNDIIIIGSHHDSVEK 234 (421)
T ss_dssp EEEEEEEECCCSSTTCCCCEEEEEEECCCCTT
T ss_pred ccceEEEecCcccCCCCCCEEEEecccccCCC
Confidence 3489998877532 012357999999999974
No 103
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=32.86 E-value=27 Score=36.13 Aligned_cols=30 Identities=23% Similarity=0.155 Sum_probs=22.0
Q ss_pred cCcEEEEEEeCCcccCCCCeeEEEEeccCCce
Q 011000 112 NMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCL 143 (496)
Q Consensus 112 ~g~~liA~~~G~~~~~~~g~~mi~AH~Dspgl 143 (496)
...||+|...|..+. ...+|++||+|+...
T Consensus 234 ~~~Nvi~~~~g~~~~--~~~i~~~aH~Ds~~~ 263 (444)
T 3iib_A 234 TSYNVIAEVKGSTKA--DEIVLIGAHLDSWDE 263 (444)
T ss_dssp EEEEEEEEECCSTEE--EEEEEEEEECCCCSS
T ss_pred eeEEEEEEEeCCCCC--CCEEEEEeecccCCC
Confidence 345899988786421 346999999999853
No 104
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=21.46 E-value=49 Score=36.15 Aligned_cols=29 Identities=10% Similarity=0.154 Sum_probs=21.5
Q ss_pred cCcEEEEEEeCCcccCCCCeeEEEEeccCCc
Q 011000 112 NMSCLVAFAVGQKYSVGNGFHIIAAHTDSPC 142 (496)
Q Consensus 112 ~g~~liA~~~G~~~~~~~g~~mi~AH~Dspg 142 (496)
...||||...|.... ...+|++||.|+.+
T Consensus 265 ~~~NVi~~i~G~~~~--~~~vvvgaH~Ds~~ 293 (640)
T 3kas_A 265 KILNIFGVIKGFVEP--DHYVVVGAQRDAWG 293 (640)
T ss_dssp EEEEEEEEECCSSEE--EEEEEEEEECCCSS
T ss_pred eEEEEEEEEeCCcCC--CCceeeecccCCCC
Confidence 334999998887311 34799999999984
Done!