Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>011001
MKNIFTLSKPPKPWGSRRKSQHRSPFFILSITIFTFLLLFIAYNHIPESLLSLSSKTLDP
KFSQCHTTKAISPDKKFFLYAPHSGFSNQLGEFKNAILMAGILNRTLIVPPVLDHHAVAL
GSCPKFRVQSPNQMRISVWHHAIELLRSGRYVSMADIIDISSLVSSSMVKVLDFRRFASL
WCGLDVDLACLISLNTQPSLLDRLRQCVSMLSGLNGNVDGCFFAVDDDCRTTVWTYQSGD
EDGVLDPFQPDEQLKKKKKVSYVRRRRDVYKALGSGSKADSATILAFGTLFTAPYKGSQL
YIDINAAPRDQRIQSLIENIEFIPFVPEILSAGKKYAFETIKAPFLCAQLRLLDGQFKNH
WKATFLRLKEKLDSLRQKGPQPINIFVMTDLPVTNWTGNYLGDLAKDTDSFKLYFLRKED
ELLAQTAQKLATAGHGLRYGVTGMEKPCPQRFSDVLLFIEQTVCSCATVGFVGTAGSTLA
ESIELMRKFDVCSTQN

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  011001
        (496 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2129026 - symbol:AT4G17430 species:3702 "Arabi...  1305  3.8e-133  1


>TAIR|locus:2129026 [details] [associations]
            symbol:AT4G17430 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005794 "Golgi apparatus"
            evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
            "trans-Golgi network" evidence=IDA] [GO:0016757 "transferase
            activity, transferring glycosyl groups" evidence=ISM] GO:GO:0005794
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005768 GO:GO:0016757
            GO:GO:0005802 InterPro:IPR019378 Pfam:PF10250 EMBL:BT025328
            IPI:IPI00520312 RefSeq:NP_193473.1 UniGene:At.50350
            ProteinModelPortal:Q1JPM5 EnsemblPlants:AT4G17430.1 GeneID:827454
            KEGG:ath:AT4G17430 TAIR:At4g17430 HOGENOM:HOG000084922
            InParanoid:Q1JPM5 OMA:CRTTVWT PhylomeDB:Q1JPM5
            ProtClustDB:CLSN2685888 Genevestigator:Q1JPM5 Uniprot:Q1JPM5
        Length = 507

 Score = 1305 (464.4 bits), Expect = 3.8e-133, P = 3.8e-133
 Identities = 260/510 (50%), Positives = 344/510 (67%)

Query:     1 MKNIFTLSKP-PKPWGSRRKSQHRSPX---XXXXXXXXXXXXXXXAYNHIPESLLSLSSK 56
             M N F  S+P P+PW +R+K   +S                     Y+ +P+SL S+S+ 
Sbjct:     1 MNNFFNPSRPSPRPWPNRKKQTDKSAIFLCSVSILVVFFIVVFFITYSEMPKSLFSISAF 60

Query:    57 TLDPKFSQCHT---TKAISPDKKFFLYAPHSGFSNQLGEFKNAILMAGILNRTLIVPPVL 113
             +   +F QC +   T+ +   +KF  YAPHSGFSNQL EFKNA+LMAGILNRTLI+PP+L
Sbjct:    61 SGSVQFPQCRSEILTRTLL-GQKFLWYAPHSGFSNQLSEFKNALLMAGILNRTLIIPPIL 119

Query:   114 DHHAVALGSCPKFRVQSPNQMRISVWHHAIELLRSGRYVSMAXXXXXXXXXXXXXXXXXX 173
             DHHAVALGSCPKFRV SP+++RISVW+H+IELL++ RYVSMA                  
Sbjct:   120 DHHAVALGSCPKFRVLSPSEIRISVWNHSIELLKTDRYVSMADIVDISSLVSSSAVRVID 179

Query:   174 FRRFASLWCGLDVDLACLISLNTQPSLLDRLRQCVSMLSGLNGNVDGCFFAVDDDCRTTV 233
             FR FASL CG+D++  C   L  Q    + L+QC  +LSG+ GNVD C +AVD+DCRTTV
Sbjct:   180 FRYFASLQCGVDLETLCTDDLAEQSQAYESLKQCGYLLSGVRGNVDKCLYAVDEDCRTTV 239

Query:   234 WTYQSGDEDGVLDPFQPDEQLXXXXXXXXXXXXXXXXXALGSGSKADSATILAFGTLFTA 293
             WTY++G+ DG LD FQPDE+L                  LG G++A+SA ILAFG+LFTA
Sbjct:   240 WTYKNGEADGRLDSFQPDEKLKKKKKLSNVRRRRDVYKTLGHGTEAESAAILAFGSLFTA 299

Query:   294 PYKGSQLYIDINAAPRDQRIQSLIENIEFIPFVPEILSAGKKYAFETIKAPFLCAQLRLL 353
             PYKGS+LYIDI+ +P+   I+SL+E ++F+PFV EI+ AGKK+A ETIKAPFLCAQLRLL
Sbjct:   300 PYKGSELYIDIHKSPK---IKSLVEKVDFLPFVREIMIAGKKFASETIKAPFLCAQLRLL 356

Query:   354 DGQFKNHWKATFLRLKEKLDSLRQKGPQPINIFVMTDLPVTNWTGNYLGDLAKDTDSFKL 413
             DGQFKNH ++TF  L +KL++L  K P  IN+FVMTDLP  NWTG YLGDL+K++ +FKL
Sbjct:   357 DGQFKNHRESTFTGLYQKLEALSVKNPGLINVFVMTDLPEFNWTGTYLGDLSKNSTNFKL 416

Query:   414 YFLRKEDEXXXXXXXXXXXXGHGLRYG--------VTGMEKPC-PQRFSDVLLFIEQTVC 464
             +F+ ++DE             HG ++G        +  M+  C P   S+V L+IE+ VC
Sbjct:   417 HFIGEQDEFLARTEHELDSASHGQKFGSIPMSLDSIKKMQTHCYPHGGSNVQLYIEEAVC 476

Query:   465 SCATVGFVGTAGSTLAESIELMRKFDVCST 494
             SCA++GFVGT GST+A+S+E+MRK++ CS+
Sbjct:   477 SCASLGFVGTPGSTIADSVEMMRKYNACSS 506


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.424    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      496       433   0.00087  118 3  11 22  0.36    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  275 KB (2145 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.40u 0.10s 29.50t   Elapsed:  00:00:02
  Total cpu time:  29.40u 0.10s 29.50t   Elapsed:  00:00:02
  Start:  Tue May 21 09:06:26 2013   End:  Tue May 21 09:06:28 2013

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