Query 011002
Match_columns 496
No_of_seqs 489 out of 2695
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 18:46:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011002.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011002hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ixk_A Methyltransferase; open 100.0 2.3E-61 8E-66 491.3 29.8 309 65-383 7-315 (315)
2 3m4x_A NOL1/NOP2/SUN family pr 100.0 5.1E-59 1.7E-63 495.7 23.6 297 71-386 5-306 (456)
3 3m6w_A RRNA methylase; rRNA me 100.0 2.7E-58 9.3E-63 490.9 24.6 298 74-385 2-302 (464)
4 2frx_A Hypothetical protein YE 100.0 2E-57 6.7E-62 487.0 27.7 301 71-385 5-313 (479)
5 2yxl_A PH0851 protein, 450AA l 100.0 1.2E-56 4.2E-61 477.4 26.1 299 66-383 149-449 (450)
6 1sqg_A SUN protein, FMU protei 100.0 4.8E-55 1.6E-59 462.2 29.5 290 67-383 139-429 (429)
7 2b9e_A NOL1/NOP2/SUN domain fa 100.0 8.7E-55 3E-59 442.5 25.7 273 99-384 7-302 (309)
8 4fzv_A Putative methyltransfer 100.0 2.1E-53 7.2E-58 439.9 22.8 290 84-384 29-359 (359)
9 3ajd_A Putative methyltransfer 100.0 6.3E-49 2.2E-53 391.5 23.5 270 95-383 2-274 (274)
10 4dmg_A Putative uncharacterize 99.8 1.1E-18 3.8E-23 182.5 10.0 162 152-337 190-355 (393)
11 3id6_C Fibrillarin-like rRNA/T 99.7 8.5E-18 2.9E-22 163.9 14.0 133 175-338 73-213 (232)
12 3lpm_A Putative methyltransfer 99.7 7.1E-17 2.4E-21 158.2 19.4 166 157-337 20-197 (259)
13 1wxx_A TT1595, hypothetical pr 99.7 1E-17 3.6E-22 174.0 7.2 162 152-337 187-354 (382)
14 3v97_A Ribosomal RNA large sub 99.7 2.6E-17 9E-22 183.8 9.2 174 135-338 504-679 (703)
15 2as0_A Hypothetical protein PH 99.7 5.8E-17 2E-21 168.9 9.9 159 153-332 194-357 (396)
16 3c0k_A UPF0064 protein YCCW; P 99.7 2.8E-17 9.7E-22 171.4 4.4 166 150-337 195-368 (396)
17 2b3t_A Protein methyltransfera 99.7 8.8E-16 3E-20 151.7 14.5 142 177-334 108-256 (276)
18 3u81_A Catechol O-methyltransf 99.6 6.4E-16 2.2E-20 147.5 12.3 169 162-383 42-215 (221)
19 1i1n_A Protein-L-isoaspartate 99.6 1.7E-15 5.8E-20 144.4 15.2 167 112-320 6-190 (226)
20 2dul_A N(2),N(2)-dimethylguano 99.6 6.1E-17 2.1E-21 168.5 5.0 172 178-384 47-234 (378)
21 3tfw_A Putative O-methyltransf 99.6 3.1E-16 1.1E-20 153.0 9.2 121 167-316 52-174 (248)
22 3duw_A OMT, O-methyltransferas 99.6 1.5E-15 5.2E-20 144.4 9.1 121 167-316 47-171 (223)
23 2frn_A Hypothetical protein PH 99.6 5.2E-15 1.8E-19 147.1 13.3 126 176-336 123-252 (278)
24 2b78_A Hypothetical protein SM 99.6 5.1E-16 1.8E-20 161.7 6.3 165 152-337 188-358 (385)
25 3tma_A Methyltransferase; thum 99.6 1.1E-14 3.7E-19 149.3 16.0 139 171-336 196-334 (354)
26 2igt_A SAM dependent methyltra 99.6 6.3E-16 2.2E-20 158.1 5.3 157 152-329 126-288 (332)
27 1nv8_A HEMK protein; class I a 99.6 7.3E-16 2.5E-20 154.1 4.7 222 77-325 22-259 (284)
28 3e05_A Precorrin-6Y C5,15-meth 99.6 4.2E-14 1.4E-18 132.8 15.6 140 158-333 21-160 (204)
29 3axs_A Probable N(2),N(2)-dime 99.6 3.1E-16 1E-20 163.9 1.0 175 177-384 51-228 (392)
30 2gpy_A O-methyltransferase; st 99.6 2.9E-15 9.9E-20 143.8 7.4 129 158-316 34-164 (233)
31 4df3_A Fibrillarin-like rRNA/T 99.6 2.2E-14 7.5E-19 139.9 13.5 118 165-312 58-182 (233)
32 3njr_A Precorrin-6Y methylase; 99.6 2.1E-14 7E-19 136.2 12.9 132 168-338 45-177 (204)
33 3bt7_A TRNA (uracil-5-)-methyl 99.6 1.3E-14 4.3E-19 150.1 11.9 102 179-315 214-329 (369)
34 3mti_A RRNA methylase; SAM-dep 99.6 1.8E-14 6.2E-19 132.8 11.7 123 175-318 19-141 (185)
35 3k6r_A Putative transferase PH 99.5 2.7E-14 9.1E-19 142.8 13.6 125 176-335 123-251 (278)
36 3evz_A Methyltransferase; NYSG 99.5 1.5E-14 5.1E-19 137.9 11.2 150 175-338 52-203 (230)
37 2ozv_A Hypothetical protein AT 99.5 5.5E-14 1.9E-18 138.3 15.3 138 166-312 24-170 (260)
38 1yb2_A Hypothetical protein TA 99.5 1.1E-14 3.6E-19 144.0 10.2 205 94-338 28-234 (275)
39 2qm3_A Predicted methyltransfe 99.5 7.1E-14 2.4E-18 144.6 15.7 153 153-337 146-305 (373)
40 3eey_A Putative rRNA methylase 99.5 5E-14 1.7E-18 131.1 13.1 126 175-318 19-145 (197)
41 3c3y_A Pfomt, O-methyltransfer 99.5 3.1E-14 1.1E-18 138.0 9.5 121 167-316 59-185 (237)
42 3r3h_A O-methyltransferase, SA 99.5 4.5E-15 1.5E-19 144.8 3.1 127 161-316 43-174 (242)
43 4dzr_A Protein-(glutamine-N5) 99.5 4E-15 1.4E-19 139.0 2.6 144 177-329 29-178 (215)
44 3p9n_A Possible methyltransfer 99.5 1.1E-13 3.9E-18 128.4 12.4 112 177-315 43-156 (189)
45 3a27_A TYW2, uncharacterized p 99.5 8E-14 2.7E-18 138.2 10.4 109 173-316 114-222 (272)
46 1uwv_A 23S rRNA (uracil-5-)-me 99.5 1.2E-12 4.1E-17 138.2 18.5 88 172-262 280-369 (433)
47 1o54_A SAM-dependent O-methylt 99.5 1E-12 3.5E-17 129.6 16.7 133 169-338 103-236 (277)
48 2ift_A Putative methylase HI07 99.5 1.1E-13 3.6E-18 130.7 8.8 110 178-316 53-167 (201)
49 3dr5_A Putative O-methyltransf 99.4 1.5E-13 5E-18 132.3 9.3 113 174-315 52-166 (221)
50 1nt2_A Fibrillarin-like PRE-rR 99.4 9E-13 3.1E-17 125.7 14.5 131 174-338 53-192 (210)
51 3hm2_A Precorrin-6Y C5,15-meth 99.4 9.3E-13 3.2E-17 119.8 14.0 134 169-338 16-150 (178)
52 3mb5_A SAM-dependent methyltra 99.4 1.8E-13 6.2E-18 132.6 9.7 128 168-332 83-211 (255)
53 2yx1_A Hypothetical protein MJ 99.4 2.9E-13 9.9E-18 138.3 11.3 108 177-326 194-302 (336)
54 1yzh_A TRNA (guanine-N(7)-)-me 99.4 7.5E-13 2.6E-17 125.4 13.1 140 177-338 40-179 (214)
55 3kkz_A Uncharacterized protein 99.4 1.1E-13 3.8E-18 135.2 7.5 122 176-328 44-166 (267)
56 3g89_A Ribosomal RNA small sub 99.4 9.3E-14 3.2E-18 136.1 7.0 130 176-337 78-208 (249)
57 2pwy_A TRNA (adenine-N(1)-)-me 99.4 1.1E-12 3.8E-17 126.8 14.2 134 169-338 87-221 (258)
58 1xdz_A Methyltransferase GIDB; 99.4 6.9E-13 2.4E-17 128.1 12.6 131 175-337 67-198 (240)
59 3dou_A Ribosomal RNA large sub 99.4 1.5E-13 5.3E-18 129.3 7.5 123 176-330 23-154 (191)
60 3gdh_A Trimethylguanosine synt 99.4 2.2E-13 7.4E-18 131.0 8.4 93 167-265 67-160 (241)
61 1inl_A Spermidine synthase; be 99.4 1.2E-13 4.2E-18 138.7 6.9 131 178-331 90-226 (296)
62 3dh0_A SAM dependent methyltra 99.4 9.3E-13 3.2E-17 124.2 12.3 141 170-338 29-178 (219)
63 3tr6_A O-methyltransferase; ce 99.4 9.7E-14 3.3E-18 131.9 4.2 120 167-315 53-177 (225)
64 1wy7_A Hypothetical protein PH 99.4 2E-12 6.9E-17 121.1 13.1 126 175-337 46-171 (207)
65 1i9g_A Hypothetical protein RV 99.4 1.2E-12 4.1E-17 128.6 11.7 114 169-315 90-206 (280)
66 2fca_A TRNA (guanine-N(7)-)-me 99.4 9.8E-13 3.4E-17 125.3 10.7 117 177-312 37-153 (213)
67 3grz_A L11 mtase, ribosomal pr 99.4 1.5E-12 5.1E-17 122.0 11.4 125 176-338 58-182 (205)
68 2fpo_A Methylase YHHF; structu 99.4 8.4E-13 2.9E-17 124.6 9.7 111 178-316 54-164 (202)
69 3f4k_A Putative methyltransfer 99.4 4.1E-12 1.4E-16 122.6 14.6 115 175-320 43-158 (257)
70 1dus_A MJ0882; hypothetical pr 99.4 2.8E-12 9.5E-17 117.4 12.7 118 167-315 41-160 (194)
71 3lbf_A Protein-L-isoaspartate 99.4 1.5E-12 5.2E-17 122.2 11.2 120 158-314 57-176 (210)
72 3tm4_A TRNA (guanine N2-)-meth 99.4 2.6E-12 9.1E-17 133.0 13.9 155 153-337 187-348 (373)
73 2h00_A Methyltransferase 10 do 99.4 6.3E-12 2.1E-16 122.0 15.4 148 178-336 65-233 (254)
74 1xxl_A YCGJ protein; structura 99.4 1.4E-12 4.6E-17 125.7 10.3 122 163-315 6-127 (239)
75 1vl5_A Unknown conserved prote 99.4 1.7E-12 5.8E-17 126.1 10.9 132 152-314 11-142 (260)
76 3ntv_A MW1564 protein; rossman 99.4 6E-13 2E-17 128.2 7.5 122 163-315 56-179 (232)
77 2pbf_A Protein-L-isoaspartate 99.4 8E-12 2.7E-16 118.9 15.2 104 175-312 77-193 (227)
78 1sui_A Caffeoyl-COA O-methyltr 99.4 5.1E-13 1.7E-17 130.6 6.5 123 163-314 64-192 (247)
79 4dcm_A Ribosomal RNA large sub 99.4 4.5E-12 1.6E-16 131.5 13.9 124 169-317 213-339 (375)
80 2esr_A Methyltransferase; stru 99.4 2.1E-12 7.2E-17 118.1 10.0 111 176-316 29-142 (177)
81 3fpf_A Mtnas, putative unchara 99.4 3.2E-12 1.1E-16 128.7 12.1 106 173-312 117-222 (298)
82 3c3p_A Methyltransferase; NP_9 99.4 2.9E-13 9.9E-18 127.7 4.2 117 169-316 47-164 (210)
83 2fhp_A Methylase, putative; al 99.3 2.1E-12 7.1E-17 118.4 9.7 114 176-316 42-158 (187)
84 3vc1_A Geranyl diphosphate 2-C 99.3 6.5E-12 2.2E-16 126.0 14.0 117 170-317 108-226 (312)
85 1dl5_A Protein-L-isoaspartate 99.3 3.9E-12 1.3E-16 128.4 12.4 113 168-314 65-177 (317)
86 3kr9_A SAM-dependent methyltra 99.3 1E-11 3.5E-16 120.4 14.5 127 176-338 13-140 (225)
87 1o9g_A RRNA methyltransferase; 99.3 2.7E-12 9.3E-17 124.5 10.5 123 176-315 49-217 (250)
88 1nkv_A Hypothetical protein YJ 99.3 8.6E-12 2.9E-16 120.3 13.7 115 170-315 28-143 (256)
89 3dxy_A TRNA (guanine-N(7)-)-me 99.3 8.4E-13 2.9E-17 126.7 6.3 118 177-313 33-151 (218)
90 2f8l_A Hypothetical protein LM 99.3 1.3E-12 4.5E-17 133.4 7.6 145 175-331 127-276 (344)
91 1l3i_A Precorrin-6Y methyltran 99.3 2.3E-12 8E-17 117.7 8.5 129 168-333 23-152 (192)
92 2h1r_A Dimethyladenosine trans 99.3 8.1E-13 2.8E-17 132.9 5.5 130 159-316 23-163 (299)
93 2ipx_A RRNA 2'-O-methyltransfe 99.3 7.7E-12 2.6E-16 119.9 12.0 109 174-312 73-182 (233)
94 2plw_A Ribosomal RNA methyltra 99.3 1.2E-11 4.2E-16 115.0 12.9 126 176-330 20-169 (201)
95 1r18_A Protein-L-isoaspartate( 99.3 4.2E-12 1.4E-16 121.3 9.8 111 170-314 74-196 (227)
96 3lec_A NADB-rossmann superfami 99.3 2.1E-11 7.2E-16 118.5 14.7 127 176-338 19-146 (230)
97 2vdv_E TRNA (guanine-N(7)-)-me 99.3 3.1E-12 1.1E-16 124.1 8.8 117 177-312 48-173 (246)
98 4gek_A TRNA (CMO5U34)-methyltr 99.3 6.8E-12 2.3E-16 123.9 11.4 113 176-316 68-182 (261)
99 1g8a_A Fibrillarin-like PRE-rR 99.3 1.1E-11 3.8E-16 118.1 12.3 108 176-313 71-179 (227)
100 2b25_A Hypothetical protein; s 99.3 8.6E-12 2.9E-16 126.6 12.2 114 168-312 95-219 (336)
101 3hem_A Cyclopropane-fatty-acyl 99.3 3.7E-11 1.3E-15 119.6 16.4 123 170-316 64-187 (302)
102 3jwh_A HEN1; methyltransferase 99.3 3.2E-11 1.1E-15 113.9 15.0 117 171-314 22-143 (217)
103 1fbn_A MJ fibrillarin homologu 99.3 1.4E-11 4.8E-16 118.2 12.4 104 174-311 70-177 (230)
104 3dmg_A Probable ribosomal RNA 99.3 1.2E-11 4E-16 128.8 12.5 114 177-317 232-345 (381)
105 3gnl_A Uncharacterized protein 99.3 2.5E-11 8.5E-16 119.0 14.0 127 176-338 19-146 (244)
106 2yxd_A Probable cobalt-precorr 99.3 1.4E-11 4.8E-16 111.9 11.4 126 169-335 26-151 (183)
107 3dlc_A Putative S-adenosyl-L-m 99.3 5.4E-12 1.8E-16 117.9 8.8 114 171-315 37-151 (219)
108 2yxe_A Protein-L-isoaspartate 99.3 1.4E-11 4.7E-16 116.1 11.6 112 169-314 68-179 (215)
109 2avd_A Catechol-O-methyltransf 99.3 7.9E-13 2.7E-17 125.9 3.0 116 171-315 62-182 (229)
110 3cbg_A O-methyltransferase; cy 99.3 1.4E-12 4.9E-17 125.7 4.7 119 169-316 63-186 (232)
111 1ws6_A Methyltransferase; stru 99.3 2.3E-12 8E-17 116.2 5.7 108 178-317 41-152 (171)
112 2okc_A Type I restriction enzy 99.3 4.7E-12 1.6E-16 134.0 8.3 163 157-334 150-332 (445)
113 3dtn_A Putative methyltransfer 99.3 2.7E-11 9.3E-16 115.4 12.4 111 176-316 42-152 (234)
114 3ofk_A Nodulation protein S; N 99.3 7.4E-11 2.5E-15 111.0 14.8 114 169-313 42-155 (216)
115 1jg1_A PIMT;, protein-L-isoasp 99.3 1.7E-11 5.6E-16 117.9 10.5 121 157-314 70-191 (235)
116 3ujc_A Phosphoethanolamine N-m 99.3 1.6E-11 5.5E-16 118.5 10.4 115 171-315 48-162 (266)
117 3orh_A Guanidinoacetate N-meth 99.2 5.2E-12 1.8E-16 122.2 6.4 113 176-312 58-170 (236)
118 2yvl_A TRMI protein, hypotheti 99.2 5.3E-11 1.8E-15 114.2 13.3 110 170-315 83-193 (248)
119 3jwg_A HEN1, methyltransferase 99.2 2.6E-11 8.8E-16 114.6 10.9 117 171-314 22-143 (219)
120 1ej0_A FTSJ; methyltransferase 99.2 3.5E-11 1.2E-15 107.9 11.2 126 176-330 20-151 (180)
121 2nyu_A Putative ribosomal RNA 99.2 1.9E-11 6.5E-16 113.1 9.5 114 176-315 20-148 (196)
122 3cgg_A SAM-dependent methyltra 99.2 2.7E-10 9.1E-15 104.2 17.0 129 176-338 44-172 (195)
123 2jjq_A Uncharacterized RNA met 99.2 5.6E-11 1.9E-15 125.4 14.2 79 176-262 288-366 (425)
124 2bm8_A Cephalosporin hydroxyla 99.2 2.4E-12 8.1E-17 125.0 3.4 131 171-336 74-214 (236)
125 1vbf_A 231AA long hypothetical 99.2 2.4E-11 8.4E-16 115.7 10.4 120 157-315 49-168 (231)
126 3bus_A REBM, methyltransferase 99.2 1.6E-10 5.6E-15 112.5 16.4 115 171-315 54-169 (273)
127 2hnk_A SAM-dependent O-methylt 99.2 4.2E-12 1.5E-16 122.4 4.5 120 168-316 50-185 (239)
128 3ckk_A TRNA (guanine-N(7)-)-me 99.2 1.6E-11 5.3E-16 119.3 8.5 120 176-314 44-170 (235)
129 3mgg_A Methyltransferase; NYSG 99.2 5.2E-11 1.8E-15 116.4 12.1 110 175-313 34-143 (276)
130 3ocj_A Putative exported prote 99.2 4.7E-11 1.6E-15 119.3 11.9 114 175-314 115-229 (305)
131 1kpg_A CFA synthase;, cyclopro 99.2 5.1E-11 1.8E-15 117.3 11.9 114 171-315 57-171 (287)
132 2xvm_A Tellurite resistance pr 99.2 9.4E-11 3.2E-15 108.2 13.0 114 169-312 23-136 (199)
133 2ih2_A Modification methylase 99.2 2E-12 6.9E-17 134.4 1.8 164 158-337 19-191 (421)
134 2o57_A Putative sarcosine dime 99.2 8.3E-11 2.8E-15 116.3 13.4 111 175-315 79-190 (297)
135 1m6y_A S-adenosyl-methyltransf 99.2 1E-11 3.5E-16 125.4 6.8 90 170-261 18-110 (301)
136 2nxc_A L11 mtase, ribosomal pr 99.2 4.7E-11 1.6E-15 116.9 11.0 124 176-338 118-241 (254)
137 1zq9_A Probable dimethyladenos 99.2 1.3E-11 4.6E-16 123.1 7.1 97 159-262 9-106 (285)
138 2fk8_A Methoxy mycolic acid sy 99.2 9.7E-11 3.3E-15 117.3 13.2 116 171-317 83-199 (318)
139 1jsx_A Glucose-inhibited divis 99.2 3.6E-11 1.2E-15 112.4 9.3 103 178-314 65-167 (207)
140 2pjd_A Ribosomal RNA small sub 99.2 6.6E-11 2.3E-15 120.8 11.8 124 167-317 185-308 (343)
141 1pjz_A Thiopurine S-methyltran 99.2 4.8E-11 1.7E-15 112.6 9.5 115 174-316 18-144 (203)
142 3sm3_A SAM-dependent methyltra 99.2 2.2E-10 7.6E-15 108.2 14.1 111 177-315 29-144 (235)
143 1zx0_A Guanidinoacetate N-meth 99.2 2.1E-11 7.1E-16 117.1 6.6 115 176-314 58-172 (236)
144 2ar0_A M.ecoki, type I restric 99.2 4.1E-11 1.4E-15 130.1 9.6 163 157-332 148-335 (541)
145 3ou2_A SAM-dependent methyltra 99.2 2.6E-10 8.8E-15 106.7 13.8 107 175-315 43-149 (218)
146 2kw5_A SLR1183 protein; struct 99.2 2.5E-10 8.4E-15 106.3 13.3 107 176-315 28-134 (202)
147 3uwp_A Histone-lysine N-methyl 99.2 7.4E-11 2.5E-15 123.5 10.6 117 171-315 166-291 (438)
148 3gu3_A Methyltransferase; alph 99.2 5.1E-11 1.8E-15 117.8 9.0 116 169-314 13-128 (284)
149 3g5t_A Trans-aconitate 3-methy 99.2 1.1E-10 3.8E-15 115.9 11.4 112 176-314 34-151 (299)
150 1ve3_A Hypothetical protein PH 99.2 1.6E-10 5.4E-15 109.1 11.7 108 177-314 37-144 (227)
151 3mq2_A 16S rRNA methyltransfer 99.2 9.3E-11 3.2E-15 110.8 10.1 143 171-338 20-181 (218)
152 4fsd_A Arsenic methyltransfera 99.2 1.5E-10 5E-15 119.9 12.4 114 176-315 81-206 (383)
153 1xtp_A LMAJ004091AAA; SGPP, st 99.2 2.8E-10 9.4E-15 109.4 13.4 136 173-338 88-235 (254)
154 3hnr_A Probable methyltransfer 99.1 1.1E-10 3.9E-15 109.8 10.4 110 173-316 40-149 (220)
155 3e23_A Uncharacterized protein 99.1 3E-10 1E-14 106.6 13.1 128 175-338 40-179 (211)
156 4htf_A S-adenosylmethionine-de 99.1 1.3E-10 4.4E-15 114.4 10.9 131 178-338 68-229 (285)
157 3p2e_A 16S rRNA methylase; met 99.1 4.8E-11 1.6E-15 115.0 7.5 114 176-312 22-139 (225)
158 3ldu_A Putative methylase; str 99.1 5.6E-10 1.9E-14 116.2 16.2 107 150-259 161-311 (385)
159 3q87_B N6 adenine specific DNA 99.1 1E-10 3.6E-15 107.2 9.3 134 168-338 11-146 (170)
160 3g07_A 7SK snRNA methylphospha 99.1 1.1E-10 3.7E-15 116.4 10.1 117 178-315 46-223 (292)
161 3bkx_A SAM-dependent methyltra 99.1 1.2E-10 4.2E-15 113.5 10.2 123 169-317 34-164 (275)
162 2ex4_A Adrenal gland protein A 99.1 1.8E-10 6E-15 110.7 11.1 134 177-338 78-222 (241)
163 2p41_A Type II methyltransfera 99.1 4E-11 1.4E-15 121.1 6.7 107 176-312 80-191 (305)
164 3m70_A Tellurite resistance pr 99.1 2.2E-10 7.7E-15 112.8 11.9 110 172-312 114-223 (286)
165 1mjf_A Spermidine synthase; sp 99.1 4.8E-11 1.6E-15 118.8 7.1 113 177-316 74-197 (281)
166 3g2m_A PCZA361.24; SAM-depende 99.1 1.6E-10 5.5E-15 114.8 10.4 115 172-316 77-194 (299)
167 2pxx_A Uncharacterized protein 99.1 2.4E-10 8.3E-15 106.5 10.2 122 177-315 41-162 (215)
168 3k0b_A Predicted N6-adenine-sp 99.1 7E-10 2.4E-14 115.8 14.6 106 151-259 168-317 (393)
169 1ri5_A MRNA capping enzyme; me 99.1 4.7E-10 1.6E-14 110.2 12.5 113 176-314 62-176 (298)
170 3lkd_A Type I restriction-modi 99.1 1.5E-10 5.1E-15 125.6 9.3 168 157-334 196-383 (542)
171 2fyt_A Protein arginine N-meth 99.1 2.1E-10 7.1E-15 117.2 9.8 113 174-315 60-174 (340)
172 3ldg_A Putative uncharacterize 99.1 8.2E-10 2.8E-14 115.0 14.4 107 151-260 161-311 (384)
173 3g5l_A Putative S-adenosylmeth 99.1 2.7E-10 9.4E-15 109.8 9.8 110 172-314 38-147 (253)
174 3lcc_A Putative methyl chlorid 99.1 4.9E-10 1.7E-14 107.0 11.4 131 178-338 66-204 (235)
175 2a14_A Indolethylamine N-methy 99.1 5.1E-10 1.7E-14 109.6 11.4 140 175-338 52-235 (263)
176 3i9f_A Putative type 11 methyl 99.1 1.3E-09 4.4E-14 98.6 13.2 106 172-316 11-116 (170)
177 2p35_A Trans-aconitate 2-methy 99.1 1.6E-10 5.5E-15 111.4 7.7 111 170-315 25-135 (259)
178 3h2b_A SAM-dependent methyltra 99.1 6.6E-10 2.3E-14 103.4 11.6 126 179-338 42-179 (203)
179 3bzb_A Uncharacterized protein 99.1 1.2E-09 4.2E-14 108.3 14.1 133 176-338 77-234 (281)
180 3ccf_A Cyclopropane-fatty-acyl 99.1 3.6E-10 1.2E-14 111.1 9.8 111 168-315 47-157 (279)
181 3l8d_A Methyltransferase; stru 99.1 8.9E-10 3E-14 105.0 12.3 129 176-338 51-197 (242)
182 2p8j_A S-adenosylmethionine-de 99.1 7.7E-10 2.6E-14 103.1 11.4 112 176-316 21-132 (209)
183 3ll7_A Putative methyltransfer 99.1 1.2E-10 4E-15 122.2 6.4 82 178-262 93-176 (410)
184 3m33_A Uncharacterized protein 99.1 2.3E-10 7.8E-15 109.2 7.8 117 176-338 46-164 (226)
185 2xyq_A Putative 2'-O-methyl tr 99.0 3.2E-10 1.1E-14 113.8 8.9 125 174-334 59-190 (290)
186 2r6z_A UPF0341 protein in RSP 99.0 4.3E-10 1.5E-14 110.9 9.6 92 167-261 72-173 (258)
187 1u2z_A Histone-lysine N-methyl 99.0 8E-10 2.7E-14 116.7 12.2 113 172-312 236-359 (433)
188 3adn_A Spermidine synthase; am 99.0 5.5E-10 1.9E-14 112.2 10.2 137 154-315 53-201 (294)
189 3q7e_A Protein arginine N-meth 99.0 2.9E-10 9.8E-15 116.5 8.2 113 176-316 64-177 (349)
190 2i62_A Nicotinamide N-methyltr 99.0 7.7E-10 2.6E-14 106.8 10.3 140 175-338 53-236 (265)
191 1wzn_A SAM-dependent methyltra 99.0 1.1E-09 3.8E-14 105.3 11.4 109 175-313 38-146 (252)
192 1ne2_A Hypothetical protein TA 99.0 9.5E-10 3.2E-14 102.5 10.5 115 175-332 48-162 (200)
193 2p7i_A Hypothetical protein; p 99.0 4E-10 1.4E-14 107.1 7.8 126 177-338 41-196 (250)
194 3d2l_A SAM-dependent methyltra 99.0 1.1E-09 3.8E-14 104.3 10.9 108 177-314 32-139 (243)
195 2vdw_A Vaccinia virus capping 99.0 4.2E-10 1.4E-14 113.3 8.3 112 178-314 48-171 (302)
196 1g6q_1 HnRNP arginine N-methyl 99.0 3.3E-10 1.1E-14 115.0 7.4 113 175-315 35-148 (328)
197 2gb4_A Thiopurine S-methyltran 99.0 2.7E-09 9.4E-14 104.6 13.6 112 175-314 65-193 (252)
198 2y1w_A Histone-arginine methyl 99.0 5.6E-10 1.9E-14 114.3 8.5 115 172-316 44-159 (348)
199 2yqz_A Hypothetical protein TT 99.0 4.4E-10 1.5E-14 108.4 7.2 105 175-311 36-140 (263)
200 3r0q_C Probable protein argini 99.0 4.6E-10 1.6E-14 116.2 7.7 113 174-315 59-172 (376)
201 3bwc_A Spermidine synthase; SA 99.0 5.7E-10 1.9E-14 112.3 8.2 115 177-314 94-212 (304)
202 3fzg_A 16S rRNA methylase; met 99.0 3E-10 1E-14 107.4 5.6 108 177-316 48-157 (200)
203 3pfg_A N-methyltransferase; N, 99.0 2E-09 6.9E-14 104.5 11.3 104 177-313 49-152 (263)
204 3dli_A Methyltransferase; PSI- 99.0 2.2E-09 7.5E-14 102.9 11.2 104 176-314 39-142 (240)
205 3v97_A Ribosomal RNA large sub 99.0 4E-09 1.4E-13 117.8 14.9 110 150-259 156-313 (703)
206 2r3s_A Uncharacterized protein 99.0 1E-08 3.5E-13 102.9 16.6 116 173-317 158-276 (335)
207 1qzz_A RDMB, aclacinomycin-10- 99.0 1.1E-08 3.7E-13 104.6 16.9 113 171-313 175-288 (374)
208 3bkw_A MLL3908 protein, S-aden 99.0 5.1E-10 1.7E-14 106.6 6.4 111 170-313 35-145 (243)
209 2oxt_A Nucleoside-2'-O-methylt 99.0 4.2E-10 1.4E-14 111.4 6.0 109 176-314 72-187 (265)
210 3iv6_A Putative Zn-dependent a 99.0 1.7E-09 5.7E-14 107.0 10.1 114 170-314 37-150 (261)
211 1xj5_A Spermidine synthase 1; 99.0 7.2E-10 2.5E-14 113.3 7.5 118 176-316 118-239 (334)
212 3e8s_A Putative SAM dependent 99.0 2.1E-09 7.2E-14 100.7 10.1 104 174-314 48-154 (227)
213 3thr_A Glycine N-methyltransfe 98.9 4.8E-10 1.6E-14 110.5 5.7 123 171-314 50-177 (293)
214 3b3j_A Histone-arginine methyl 98.9 1.4E-09 4.6E-14 116.5 9.6 112 174-315 154-266 (480)
215 2wa2_A Non-structural protein 98.9 4.8E-10 1.6E-14 111.7 5.6 106 176-314 80-195 (276)
216 1y8c_A S-adenosylmethionine-de 98.9 1.1E-09 3.7E-14 104.2 7.7 107 178-313 37-143 (246)
217 3bgv_A MRNA CAP guanine-N7 met 98.9 3.1E-09 1.1E-13 106.3 11.5 114 177-315 33-158 (313)
218 3khk_A Type I restriction-modi 98.9 2.2E-10 7.6E-15 124.4 3.2 165 158-333 225-420 (544)
219 2i7c_A Spermidine synthase; tr 98.9 8.4E-10 2.9E-14 109.9 6.8 115 177-315 77-195 (283)
220 3ege_A Putative methyltransfer 98.9 6E-10 2.1E-14 108.6 5.4 107 170-314 26-132 (261)
221 3htx_A HEN1; HEN1, small RNA m 98.9 3.2E-09 1.1E-13 118.9 11.8 117 171-314 714-836 (950)
222 2b2c_A Spermidine synthase; be 98.9 1.4E-09 4.8E-14 110.3 7.3 116 177-316 107-226 (314)
223 1iy9_A Spermidine synthase; ro 98.9 4.1E-09 1.4E-13 104.5 10.6 113 178-314 75-191 (275)
224 2qfm_A Spermine synthase; sper 98.9 1.4E-09 4.7E-14 112.1 7.3 122 178-317 188-319 (364)
225 3dp7_A SAM-dependent methyltra 98.9 3.9E-08 1.3E-12 100.9 18.1 115 177-318 178-293 (363)
226 3i53_A O-methyltransferase; CO 98.9 4.9E-08 1.7E-12 98.5 18.5 113 175-317 166-279 (332)
227 2o07_A Spermidine synthase; st 98.9 1.6E-09 5.6E-14 109.1 7.5 115 177-315 94-212 (304)
228 3gru_A Dimethyladenosine trans 98.9 3.1E-09 1.1E-13 106.9 9.4 94 160-260 32-125 (295)
229 3ggd_A SAM-dependent methyltra 98.9 6.1E-09 2.1E-13 99.9 11.0 111 175-315 53-166 (245)
230 1x19_A CRTF-related protein; m 98.9 2.8E-08 9.6E-13 101.4 16.3 116 171-316 183-299 (359)
231 1yub_A Ermam, rRNA methyltrans 98.9 1E-10 3.5E-15 113.6 -2.0 96 160-262 11-106 (245)
232 2pt6_A Spermidine synthase; tr 98.9 1.1E-09 3.7E-14 111.3 5.4 115 177-315 115-233 (321)
233 3bxo_A N,N-dimethyltransferase 98.9 3.6E-09 1.2E-13 100.5 8.6 106 177-315 39-144 (239)
234 4hg2_A Methyltransferase type 98.9 2.2E-09 7.5E-14 105.7 7.3 103 178-318 39-141 (257)
235 2avn_A Ubiquinone/menaquinone 98.9 4.6E-09 1.6E-13 102.1 9.4 102 178-315 54-155 (260)
236 1tw3_A COMT, carminomycin 4-O- 98.9 3.2E-08 1.1E-12 100.7 16.1 114 171-314 176-290 (360)
237 2g72_A Phenylethanolamine N-me 98.9 1.1E-08 3.6E-13 101.1 11.9 138 177-338 70-253 (289)
238 3gjy_A Spermidine synthase; AP 98.9 4.5E-09 1.5E-13 106.7 9.2 113 180-315 91-203 (317)
239 2gs9_A Hypothetical protein TT 98.9 6.8E-09 2.3E-13 97.1 9.7 100 178-315 36-135 (211)
240 3gwz_A MMCR; methyltransferase 98.9 9.1E-08 3.1E-12 98.3 18.8 117 172-318 196-313 (369)
241 2oyr_A UPF0341 protein YHIQ; a 98.8 3.4E-09 1.2E-13 104.6 7.4 91 167-261 75-176 (258)
242 2aot_A HMT, histamine N-methyl 98.8 1.8E-09 6E-14 107.1 5.4 113 176-314 50-174 (292)
243 4hc4_A Protein arginine N-meth 98.8 4.1E-09 1.4E-13 109.4 8.4 117 177-322 82-201 (376)
244 3mcz_A O-methyltransferase; ad 98.8 4.5E-08 1.5E-12 99.3 15.7 117 174-317 174-292 (352)
245 1uir_A Polyamine aminopropyltr 98.8 3.5E-09 1.2E-13 107.0 6.9 118 177-315 76-198 (314)
246 3cc8_A Putative methyltransfer 98.8 5.8E-09 2E-13 97.9 8.0 102 177-314 31-132 (230)
247 1vlm_A SAM-dependent methyltra 98.8 1.2E-08 4.1E-13 96.5 9.7 118 179-338 48-185 (219)
248 1p91_A Ribosomal RNA large sub 98.8 5.5E-09 1.9E-13 101.7 7.4 98 177-315 84-181 (269)
249 3ufb_A Type I restriction-modi 98.8 2E-08 6.7E-13 108.8 12.3 169 157-334 196-387 (530)
250 2ip2_A Probable phenazine-spec 98.8 7.3E-08 2.5E-12 97.0 15.2 112 174-316 164-276 (334)
251 3s1s_A Restriction endonucleas 98.8 1.5E-08 5.1E-13 113.3 10.3 148 177-333 320-490 (878)
252 2zfu_A Nucleomethylin, cerebra 98.8 3.1E-08 1E-12 93.0 10.5 112 175-337 64-175 (215)
253 3tqs_A Ribosomal RNA small sub 98.8 8.6E-09 3E-13 101.5 6.9 87 167-259 18-106 (255)
254 2qe6_A Uncharacterized protein 98.7 3.2E-08 1.1E-12 98.0 10.1 111 178-315 77-199 (274)
255 2cmg_A Spermidine synthase; tr 98.7 1.5E-08 5.2E-13 99.9 6.7 100 178-316 72-175 (262)
256 1qam_A ERMC' methyltransferase 98.7 2.6E-08 8.8E-13 97.0 7.1 94 160-260 12-105 (244)
257 2px2_A Genome polyprotein [con 98.6 7.2E-09 2.5E-13 101.5 2.5 77 176-264 71-153 (269)
258 3uzu_A Ribosomal RNA small sub 98.6 3.7E-08 1.3E-12 98.2 7.6 96 160-259 24-124 (279)
259 3hp7_A Hemolysin, putative; st 98.6 9.2E-08 3.1E-12 96.0 10.2 98 178-311 85-184 (291)
260 3fut_A Dimethyladenosine trans 98.6 2.9E-08 1E-12 98.6 6.4 95 160-262 29-123 (271)
261 3cvo_A Methyltransferase-like 98.6 2.5E-07 8.4E-12 88.1 12.3 116 177-329 29-169 (202)
262 3giw_A Protein of unknown func 98.6 3.3E-08 1.1E-12 98.4 6.5 114 179-315 79-203 (277)
263 3sso_A Methyltransferase; macr 98.6 3.8E-08 1.3E-12 102.7 6.6 101 178-314 216-326 (419)
264 1af7_A Chemotaxis receptor met 98.6 5.6E-08 1.9E-12 96.7 7.6 109 178-311 105-251 (274)
265 3ftd_A Dimethyladenosine trans 98.6 4.4E-08 1.5E-12 96.0 6.6 94 160-260 13-106 (249)
266 3lst_A CALO1 methyltransferase 98.6 3.6E-07 1.2E-11 92.9 13.0 113 171-316 177-290 (348)
267 3frh_A 16S rRNA methylase; met 98.5 2.9E-07 9.8E-12 90.0 10.4 107 177-316 104-211 (253)
268 1wg8_A Predicted S-adenosylmet 98.5 5.8E-08 2E-12 96.7 5.2 85 170-261 14-101 (285)
269 3lcv_B Sisomicin-gentamicin re 98.5 1.5E-07 5.2E-12 92.9 7.7 109 178-316 132-241 (281)
270 4a6d_A Hydroxyindole O-methylt 98.5 1.1E-06 3.9E-11 89.8 14.5 116 173-318 174-289 (353)
271 4e2x_A TCAB9; kijanose, tetron 98.5 3.6E-08 1.2E-12 102.5 3.2 108 172-314 101-210 (416)
272 3opn_A Putative hemolysin; str 98.5 1.2E-07 4.2E-12 91.7 6.7 100 178-312 37-137 (232)
273 2qy6_A UPF0209 protein YFCK; s 98.5 4E-07 1.4E-11 89.7 9.2 131 176-338 58-232 (257)
274 1qyr_A KSGA, high level kasuga 98.4 7.4E-08 2.5E-12 94.6 3.8 88 169-261 12-102 (252)
275 3evf_A RNA-directed RNA polyme 98.4 2.3E-07 7.9E-12 91.9 6.6 127 176-327 72-199 (277)
276 3tka_A Ribosomal RNA small sub 98.4 3E-07 1E-11 93.6 5.8 88 170-261 49-140 (347)
277 3gcz_A Polyprotein; flavivirus 98.3 2.1E-07 7.1E-12 92.4 4.2 113 176-314 88-203 (282)
278 4azs_A Methyltransferase WBDD; 98.3 5.2E-07 1.8E-11 98.2 7.6 75 178-255 66-140 (569)
279 1fp2_A Isoflavone O-methyltran 98.3 3.6E-06 1.2E-10 85.6 13.2 104 176-316 186-292 (352)
280 3eld_A Methyltransferase; flav 98.3 5.1E-07 1.7E-11 90.2 6.6 126 177-328 80-207 (300)
281 3reo_A (ISO)eugenol O-methyltr 98.3 2.7E-06 9.3E-11 87.4 11.6 105 176-317 201-305 (368)
282 3p9c_A Caffeic acid O-methyltr 98.3 3.8E-06 1.3E-10 86.2 12.0 105 176-317 199-303 (364)
283 1zg3_A Isoflavanone 4'-O-methy 98.2 7.5E-06 2.6E-10 83.4 12.2 103 177-316 192-297 (358)
284 1fp1_D Isoliquiritigenin 2'-O- 98.2 4E-06 1.4E-10 85.9 10.1 103 176-315 207-309 (372)
285 3r24_A NSP16, 2'-O-methyl tran 98.2 2.6E-06 8.7E-11 84.9 7.7 106 175-312 106-217 (344)
286 2wk1_A NOVP; transferase, O-me 98.2 2.8E-06 9.6E-11 84.8 7.7 126 179-333 107-264 (282)
287 3p8z_A Mtase, non-structural p 98.1 1.1E-05 3.7E-10 78.2 11.0 79 176-260 76-156 (267)
288 4auk_A Ribosomal RNA large sub 98.1 1.3E-06 4.4E-11 90.2 4.8 73 176-260 209-281 (375)
289 2oo3_A Protein involved in cat 98.0 5.2E-06 1.8E-10 82.7 6.2 149 149-330 56-212 (283)
290 2ld4_A Anamorsin; methyltransf 98.0 4.8E-06 1.6E-10 75.6 4.8 114 174-333 8-128 (176)
291 3g7u_A Cytosine-specific methy 97.9 9.1E-05 3.1E-09 76.7 13.8 81 180-267 3-89 (376)
292 3o4f_A Spermidine synthase; am 97.8 0.00025 8.4E-09 71.1 14.2 117 171-312 77-198 (294)
293 1g55_A DNA cytosine methyltran 97.8 1.1E-05 3.7E-10 82.5 4.3 83 180-267 3-86 (343)
294 3ua3_A Protein arginine N-meth 97.8 1.9E-05 6.5E-10 87.3 5.7 122 179-325 410-549 (745)
295 4gqb_A Protein arginine N-meth 97.7 3.7E-05 1.3E-09 84.6 7.4 119 179-325 358-482 (637)
296 2c7p_A Modification methylase 97.7 7.1E-05 2.4E-09 76.1 8.8 80 179-268 11-90 (327)
297 3lkz_A Non-structural protein 97.7 0.00019 6.4E-09 71.6 10.5 77 176-258 92-169 (321)
298 3c6k_A Spermine synthase; sper 97.6 0.00012 4.1E-09 75.8 8.6 121 178-316 205-336 (381)
299 2k4m_A TR8_protein, UPF0146 pr 97.2 0.00051 1.7E-08 62.0 6.4 64 177-258 34-99 (153)
300 3qv2_A 5-cytosine DNA methyltr 97.2 0.00032 1.1E-08 71.3 5.7 78 179-262 10-89 (327)
301 3ubt_Y Modification methylase 97.2 0.0015 5E-08 65.5 10.1 79 180-267 1-79 (331)
302 4h0n_A DNMT2; SAH binding, tra 97.1 0.00032 1.1E-08 71.4 5.2 82 180-266 4-86 (333)
303 2qrv_A DNA (cytosine-5)-methyl 97.1 0.00047 1.6E-08 69.1 5.6 84 177-266 14-100 (295)
304 2zig_A TTHA0409, putative modi 97.0 0.0014 5E-08 65.0 8.7 49 177-228 234-282 (297)
305 3vyw_A MNMC2; tRNA wobble urid 97.0 0.0026 8.8E-08 64.0 9.9 131 178-338 96-245 (308)
306 2py6_A Methyltransferase FKBM; 96.9 0.0024 8.2E-08 66.6 8.9 63 175-237 223-290 (409)
307 1i4w_A Mitochondrial replicati 96.8 0.0016 5.4E-08 66.9 6.8 81 158-242 31-118 (353)
308 3b5i_A S-adenosyl-L-methionine 96.8 0.0066 2.3E-07 62.7 11.3 129 179-315 53-228 (374)
309 3me5_A Cytosine-specific methy 96.6 0.0015 5.1E-08 69.7 5.2 85 178-266 87-186 (482)
310 2efj_A 3,7-dimethylxanthine me 96.6 0.011 3.6E-07 61.4 11.4 128 179-316 53-229 (384)
311 1g60_A Adenine-specific methyl 96.4 0.0044 1.5E-07 60.3 6.4 50 176-228 210-259 (260)
312 1m6e_X S-adenosyl-L-methionnin 96.1 0.0035 1.2E-07 64.4 4.5 130 179-315 52-212 (359)
313 1pl8_A Human sorbitol dehydrog 96.0 0.015 5E-07 58.9 8.4 99 174-312 167-273 (356)
314 3two_A Mannitol dehydrogenase; 96.0 0.014 4.8E-07 58.7 8.2 91 175-311 173-264 (348)
315 2zig_A TTHA0409, putative modi 95.8 0.0061 2.1E-07 60.5 4.5 103 229-337 20-132 (297)
316 4ej6_A Putative zinc-binding d 95.8 0.022 7.7E-07 58.0 8.9 99 174-311 178-283 (370)
317 1kol_A Formaldehyde dehydrogen 95.8 0.0091 3.1E-07 61.3 5.8 111 175-311 182-299 (398)
318 2dph_A Formaldehyde dismutase; 95.8 0.007 2.4E-07 62.3 5.0 74 174-255 181-260 (398)
319 3s2e_A Zinc-containing alcohol 95.8 0.028 9.7E-07 56.2 9.3 97 175-311 163-262 (340)
320 3pvc_A TRNA 5-methylaminomethy 95.7 0.0059 2E-07 67.5 4.0 131 177-337 57-229 (689)
321 4dkj_A Cytosine-specific methy 95.6 0.01 3.5E-07 61.9 5.5 46 180-225 11-60 (403)
322 4ft4_B DNA (cytosine-5)-methyl 95.5 0.015 5.3E-07 65.2 6.9 46 178-223 211-260 (784)
323 1e3j_A NADP(H)-dependent ketos 95.5 0.1 3.5E-06 52.5 12.3 98 174-311 164-270 (352)
324 1f8f_A Benzyl alcohol dehydrog 95.5 0.017 5.7E-07 58.7 6.4 99 174-311 186-288 (371)
325 3fpc_A NADP-dependent alcohol 95.5 0.028 9.6E-07 56.6 7.9 99 174-311 162-265 (352)
326 1p0f_A NADP-dependent alcohol 95.3 0.03 1E-06 56.8 7.7 99 174-311 187-292 (373)
327 3uko_A Alcohol dehydrogenase c 95.3 0.023 8E-07 57.8 6.9 100 174-312 189-295 (378)
328 1uuf_A YAHK, zinc-type alcohol 95.3 0.033 1.1E-06 56.8 7.9 96 175-311 191-287 (369)
329 3swr_A DNA (cytosine-5)-methyl 95.3 0.044 1.5E-06 63.2 9.6 83 179-267 540-636 (1002)
330 3jv7_A ADH-A; dehydrogenase, n 95.2 0.022 7.7E-07 57.1 6.3 97 175-311 168-269 (345)
331 3uog_A Alcohol dehydrogenase; 95.2 0.058 2E-06 54.6 9.3 98 174-312 185-287 (363)
332 1boo_A Protein (N-4 cytosine-s 95.1 0.033 1.1E-06 55.9 7.2 96 230-337 14-116 (323)
333 2fzw_A Alcohol dehydrogenase c 95.1 0.039 1.3E-06 55.9 7.6 99 174-311 186-291 (373)
334 2jhf_A Alcohol dehydrogenase E 95.1 0.044 1.5E-06 55.6 8.0 99 174-311 187-292 (374)
335 1e3i_A Alcohol dehydrogenase, 95.1 0.035 1.2E-06 56.4 7.2 100 174-312 191-297 (376)
336 4dvj_A Putative zinc-dependent 95.0 0.036 1.2E-06 56.3 7.0 94 178-311 171-269 (363)
337 4fs3_A Enoyl-[acyl-carrier-pro 95.0 0.1 3.4E-06 50.3 9.8 84 178-261 5-98 (256)
338 1cdo_A Alcohol dehydrogenase; 95.0 0.038 1.3E-06 56.1 7.1 100 174-312 188-294 (374)
339 3m6i_A L-arabinitol 4-dehydrog 94.8 0.14 4.6E-06 51.7 10.6 101 174-312 175-283 (363)
340 4a2c_A Galactitol-1-phosphate 94.7 0.14 4.9E-06 50.9 10.4 99 174-311 156-259 (346)
341 3oig_A Enoyl-[acyl-carrier-pro 94.4 0.32 1.1E-05 46.4 11.9 130 178-314 6-149 (266)
342 3av4_A DNA (cytosine-5)-methyl 94.4 0.11 3.8E-06 61.5 9.9 84 178-267 850-947 (1330)
343 1piw_A Hypothetical zinc-type 94.3 0.043 1.5E-06 55.4 5.7 73 174-255 175-249 (360)
344 3tos_A CALS11; methyltransfera 94.3 0.061 2.1E-06 52.7 6.5 130 178-337 70-243 (257)
345 3ip1_A Alcohol dehydrogenase, 94.3 0.22 7.5E-06 51.1 11.0 74 175-255 210-288 (404)
346 1vj0_A Alcohol dehydrogenase, 94.2 0.075 2.6E-06 54.2 7.3 99 174-311 190-297 (380)
347 4eez_A Alcohol dehydrogenase 1 93.8 0.18 6E-06 50.3 9.0 100 174-312 159-263 (348)
348 3goh_A Alcohol dehydrogenase, 93.8 0.045 1.5E-06 54.2 4.5 67 174-255 138-205 (315)
349 3o26_A Salutaridine reductase; 93.8 0.46 1.6E-05 45.8 11.7 82 178-260 11-102 (311)
350 2h6e_A ADH-4, D-arabinose 1-de 93.7 0.074 2.5E-06 53.3 6.0 99 175-312 168-269 (344)
351 1g60_A Adenine-specific methyl 93.7 0.043 1.5E-06 53.2 4.1 89 232-337 6-95 (260)
352 3grk_A Enoyl-(acyl-carrier-pro 93.7 0.8 2.7E-05 44.7 13.3 145 159-314 13-171 (293)
353 3k31_A Enoyl-(acyl-carrier-pro 93.5 0.36 1.2E-05 47.3 10.4 141 162-314 16-170 (296)
354 1fmc_A 7 alpha-hydroxysteroid 93.4 0.71 2.4E-05 43.2 12.0 81 178-260 10-99 (255)
355 1wma_A Carbonyl reductase [NAD 93.3 0.42 1.4E-05 45.1 10.3 80 178-259 3-92 (276)
356 3ps9_A TRNA 5-methylaminomethy 93.2 0.34 1.2E-05 53.1 10.7 130 178-337 66-237 (676)
357 1rjw_A ADH-HT, alcohol dehydro 93.2 0.25 8.7E-06 49.3 8.9 97 175-311 161-260 (339)
358 3tjr_A Short chain dehydrogena 93.1 0.56 1.9E-05 46.0 11.2 81 178-260 30-119 (301)
359 3fbg_A Putative arginate lyase 93.1 0.065 2.2E-06 53.8 4.4 92 178-310 150-246 (346)
360 3gms_A Putative NADPH:quinone 93.1 0.23 8E-06 49.5 8.4 74 174-255 140-219 (340)
361 4eye_A Probable oxidoreductase 93.0 0.094 3.2E-06 52.6 5.5 96 174-311 155-256 (342)
362 2eih_A Alcohol dehydrogenase; 92.9 0.4 1.4E-05 47.8 9.9 96 175-311 163-264 (343)
363 3lyl_A 3-oxoacyl-(acyl-carrier 92.7 1.3 4.3E-05 41.6 12.7 80 179-260 5-93 (247)
364 3jyn_A Quinone oxidoreductase; 92.6 0.32 1.1E-05 48.2 8.6 97 175-312 137-239 (325)
365 2jah_A Clavulanic acid dehydro 92.6 1.2 4.2E-05 42.0 12.4 80 178-259 6-94 (247)
366 3o38_A Short chain dehydrogena 92.5 1.3 4.3E-05 42.1 12.5 82 178-260 21-112 (266)
367 2b5w_A Glucose dehydrogenase; 92.4 0.12 4.2E-06 52.0 5.3 96 175-312 163-273 (357)
368 1pqw_A Polyketide synthase; ro 92.4 0.23 7.9E-06 45.2 6.7 98 174-311 34-136 (198)
369 3qwb_A Probable quinone oxidor 92.3 0.37 1.3E-05 47.8 8.7 96 175-311 145-246 (334)
370 1ja9_A 4HNR, 1,3,6,8-tetrahydr 92.3 0.77 2.6E-05 43.5 10.6 123 178-313 20-156 (274)
371 4dry_A 3-oxoacyl-[acyl-carrier 92.3 1.1 3.8E-05 43.4 11.9 80 178-258 32-120 (281)
372 1xa0_A Putative NADPH dependen 92.3 0.24 8.4E-06 49.0 7.2 97 175-311 145-245 (328)
373 3ioy_A Short-chain dehydrogena 92.3 0.8 2.7E-05 45.4 11.0 81 178-259 7-97 (319)
374 4dup_A Quinone oxidoreductase; 92.2 0.079 2.7E-06 53.4 3.7 97 175-312 164-265 (353)
375 2c0c_A Zinc binding alcohol de 92.1 0.17 5.9E-06 51.1 6.0 98 174-312 159-261 (362)
376 4b7c_A Probable oxidoreductase 92.1 0.12 4.2E-06 51.4 4.8 98 174-311 145-247 (336)
377 3i1j_A Oxidoreductase, short c 92.1 1.5 5E-05 41.0 12.2 81 178-259 13-104 (247)
378 2j8z_A Quinone oxidoreductase; 92.1 0.38 1.3E-05 48.4 8.5 98 175-312 159-261 (354)
379 2j3h_A NADP-dependent oxidored 92.0 0.19 6.6E-06 50.0 6.2 98 174-311 151-254 (345)
380 1v3u_A Leukotriene B4 12- hydr 91.9 0.17 5.8E-06 50.3 5.5 100 174-312 141-244 (333)
381 1boo_A Protein (N-4 cytosine-s 91.8 0.14 4.7E-06 51.4 4.8 50 176-228 250-299 (323)
382 1eg2_A Modification methylase 91.7 0.18 6.2E-06 50.6 5.6 49 176-227 240-291 (319)
383 2d8a_A PH0655, probable L-thre 91.6 0.43 1.5E-05 47.7 8.2 99 174-312 164-267 (348)
384 1eg2_A Modification methylase 91.5 0.06 2E-06 54.2 1.8 68 231-315 39-108 (319)
385 3tfo_A Putative 3-oxoacyl-(acy 91.5 1.1 3.9E-05 43.0 10.9 79 179-259 4-91 (264)
386 1y1p_A ARII, aldehyde reductas 91.5 3.5 0.00012 39.9 14.6 82 178-260 10-94 (342)
387 3lf2_A Short chain oxidoreduct 91.5 2.9 9.9E-05 39.8 13.7 82 178-260 7-98 (265)
388 2cf5_A Atccad5, CAD, cinnamyl 91.4 0.19 6.5E-06 50.7 5.4 97 175-312 176-275 (357)
389 1xu9_A Corticosteroid 11-beta- 91.3 1.5 5.1E-05 42.2 11.5 79 178-257 27-114 (286)
390 3rih_A Short chain dehydrogena 91.3 0.72 2.5E-05 45.2 9.3 82 178-260 40-130 (293)
391 3t4x_A Oxidoreductase, short c 91.3 1.8 6.3E-05 41.2 12.1 82 178-260 9-96 (267)
392 3ek2_A Enoyl-(acyl-carrier-pro 90.8 0.86 2.9E-05 43.2 9.2 81 177-259 12-102 (271)
393 3krt_A Crotonyl COA reductase; 90.7 0.17 5.8E-06 52.9 4.4 51 174-230 224-276 (456)
394 4e6p_A Probable sorbitol dehyd 90.7 1.8 6.1E-05 41.1 11.3 79 178-261 7-94 (259)
395 1mxh_A Pteridine reductase 2; 90.7 3.9 0.00013 38.9 13.8 81 178-260 10-105 (276)
396 1yqd_A Sinapyl alcohol dehydro 90.5 0.28 9.5E-06 49.7 5.6 97 175-312 183-282 (366)
397 1yb1_A 17-beta-hydroxysteroid 90.5 6.1 0.00021 37.6 15.0 80 178-259 30-118 (272)
398 1jvb_A NAD(H)-dependent alcoho 90.5 0.63 2.1E-05 46.5 8.2 98 175-311 167-270 (347)
399 3pk0_A Short-chain dehydrogena 90.4 2.8 9.4E-05 39.9 12.4 81 178-259 9-98 (262)
400 3gaf_A 7-alpha-hydroxysteroid 90.4 2.1 7.1E-05 40.6 11.4 82 178-261 11-101 (256)
401 1wly_A CAAR, 2-haloacrylate re 90.3 1.3 4.5E-05 43.7 10.4 97 174-311 141-243 (333)
402 2uvd_A 3-oxoacyl-(acyl-carrier 90.3 2.3 7.7E-05 40.0 11.5 80 179-260 4-93 (246)
403 2c07_A 3-oxoacyl-(acyl-carrier 90.2 2.3 8E-05 40.9 11.8 81 178-260 43-132 (285)
404 3nx4_A Putative oxidoreductase 90.1 0.62 2.1E-05 45.8 7.7 95 176-311 143-240 (324)
405 2ph3_A 3-oxoacyl-[acyl carrier 90.0 2.5 8.6E-05 39.1 11.5 80 180-260 2-91 (245)
406 3ojo_A CAP5O; rossmann fold, c 90.0 1.2 4.2E-05 46.5 10.1 114 188-332 18-148 (431)
407 1qor_A Quinone oxidoreductase; 89.9 0.84 2.9E-05 45.0 8.4 97 174-311 136-238 (327)
408 3qiv_A Short-chain dehydrogena 89.9 2.9 0.0001 39.2 11.9 80 178-259 8-96 (253)
409 3rkr_A Short chain oxidoreduct 89.7 4.3 0.00015 38.4 13.1 80 178-259 28-116 (262)
410 2cdc_A Glucose dehydrogenase g 89.5 0.35 1.2E-05 48.8 5.4 91 179-312 181-278 (366)
411 3ksu_A 3-oxoacyl-acyl carrier 89.5 2.3 7.9E-05 40.5 11.0 124 178-314 10-149 (262)
412 3pxx_A Carveol dehydrogenase; 89.5 2.7 9.4E-05 40.1 11.6 121 178-313 9-154 (287)
413 1yxm_A Pecra, peroxisomal tran 89.4 2.6 8.9E-05 40.7 11.5 80 178-258 17-109 (303)
414 3ai3_A NADPH-sorbose reductase 89.3 2.4 8.2E-05 40.1 11.0 80 178-259 6-95 (263)
415 1tt7_A YHFP; alcohol dehydroge 89.3 0.33 1.1E-05 48.0 5.0 97 175-311 146-246 (330)
416 2hcy_A Alcohol dehydrogenase 1 89.3 0.28 9.4E-06 49.1 4.4 98 175-312 166-269 (347)
417 4g81_D Putative hexonate dehyd 89.2 3.5 0.00012 39.8 12.1 79 178-258 8-95 (255)
418 2wsb_A Galactitol dehydrogenas 89.2 2.1 7E-05 40.0 10.2 80 178-262 10-98 (254)
419 1iz0_A Quinone oxidoreductase; 89.2 0.21 7.1E-06 48.9 3.3 92 176-311 123-217 (302)
420 4egf_A L-xylulose reductase; s 89.1 3.8 0.00013 39.1 12.2 81 178-260 19-109 (266)
421 2dq4_A L-threonine 3-dehydroge 88.9 0.37 1.3E-05 48.1 5.0 99 173-312 160-262 (343)
422 3tqh_A Quinone oxidoreductase; 88.8 0.9 3.1E-05 44.8 7.8 94 174-311 148-244 (321)
423 3ius_A Uncharacterized conserv 88.8 3.4 0.00012 39.2 11.7 66 180-258 6-72 (286)
424 1xhl_A Short-chain dehydrogena 88.5 3.9 0.00013 39.8 12.1 81 178-259 25-116 (297)
425 3r1i_A Short-chain type dehydr 88.5 2.8 9.7E-05 40.3 11.0 81 178-260 31-120 (276)
426 4eso_A Putative oxidoreductase 88.4 3.3 0.00011 39.2 11.3 121 178-314 7-140 (255)
427 3is3_A 17BETA-hydroxysteroid d 88.3 5.9 0.0002 37.7 13.0 125 178-315 17-155 (270)
428 1yb5_A Quinone oxidoreductase; 88.3 1.3 4.5E-05 44.3 8.7 98 174-312 166-269 (351)
429 3e8x_A Putative NAD-dependent 88.2 2.7 9.3E-05 38.8 10.3 71 178-258 20-93 (236)
430 3svt_A Short-chain type dehydr 88.1 5.5 0.00019 38.1 12.7 80 178-258 10-100 (281)
431 4a0s_A Octenoyl-COA reductase/ 88.0 0.71 2.4E-05 47.8 6.6 52 174-231 216-269 (447)
432 3h7a_A Short chain dehydrogena 88.0 2.6 9E-05 39.9 10.2 82 178-261 6-95 (252)
433 3ucx_A Short chain dehydrogena 88.0 4.4 0.00015 38.4 11.9 78 178-257 10-96 (264)
434 3afn_B Carbonyl reductase; alp 87.9 2.1 7.3E-05 39.9 9.4 79 178-258 6-94 (258)
435 4a27_A Synaptic vesicle membra 87.9 0.29 9.8E-06 49.1 3.4 96 174-312 138-238 (349)
436 1spx_A Short-chain reductase f 87.8 3.7 0.00013 39.1 11.3 81 178-259 5-96 (278)
437 1xg5_A ARPG836; short chain de 87.7 14 0.00047 35.1 15.3 80 178-258 31-120 (279)
438 3sx2_A Putative 3-ketoacyl-(ac 87.7 8.4 0.00029 36.6 13.7 79 178-258 12-111 (278)
439 3qlj_A Short chain dehydrogena 87.7 2.5 8.4E-05 41.7 10.1 81 178-260 26-125 (322)
440 3rku_A Oxidoreductase YMR226C; 87.7 6.6 0.00022 38.0 13.1 80 178-258 32-124 (287)
441 1e7w_A Pteridine reductase; di 87.6 15 0.00052 35.2 15.7 63 178-242 8-73 (291)
442 2hq1_A Glucose/ribitol dehydro 87.5 2.5 8.4E-05 39.3 9.5 80 178-259 4-93 (247)
443 1xkq_A Short-chain reductase f 87.5 3.9 0.00013 39.1 11.2 81 178-259 5-96 (280)
444 2qq5_A DHRS1, dehydrogenase/re 87.4 2.8 9.7E-05 39.6 10.1 78 178-257 4-91 (260)
445 2ae2_A Protein (tropinone redu 87.1 6.4 0.00022 37.1 12.4 80 178-259 8-97 (260)
446 1w6u_A 2,4-dienoyl-COA reducta 87.1 7.7 0.00026 37.2 13.1 80 178-259 25-114 (302)
447 3nyw_A Putative oxidoreductase 87.1 2.3 7.7E-05 40.3 9.1 82 178-260 6-98 (250)
448 3oec_A Carveol dehydrogenase ( 87.1 6.4 0.00022 38.6 12.7 84 178-263 45-149 (317)
449 3v2g_A 3-oxoacyl-[acyl-carrier 86.9 7.5 0.00026 37.2 12.9 124 178-314 30-167 (271)
450 1geg_A Acetoin reductase; SDR 86.9 6.9 0.00023 36.8 12.4 79 179-259 2-89 (256)
451 3f1l_A Uncharacterized oxidore 86.8 5.1 0.00017 37.7 11.5 81 178-259 11-102 (252)
452 3pgx_A Carveol dehydrogenase; 86.8 5.7 0.00019 38.0 12.0 81 178-260 14-116 (280)
453 2p91_A Enoyl-[acyl-carrier-pro 86.7 3.6 0.00012 39.5 10.4 79 178-258 20-108 (285)
454 3l6e_A Oxidoreductase, short-c 86.6 7.5 0.00026 36.2 12.4 120 179-313 3-135 (235)
455 3l77_A Short-chain alcohol deh 86.5 4.9 0.00017 37.1 11.0 79 179-259 2-90 (235)
456 3t7c_A Carveol dehydrogenase; 86.5 6.4 0.00022 38.2 12.3 80 178-259 27-127 (299)
457 4ibo_A Gluconate dehydrogenase 86.4 4.3 0.00015 38.9 10.8 80 178-259 25-113 (271)
458 1gee_A Glucose 1-dehydrogenase 86.4 7.9 0.00027 36.2 12.5 80 178-259 6-95 (261)
459 2ehd_A Oxidoreductase, oxidore 86.3 3.6 0.00012 37.9 9.9 75 179-259 5-88 (234)
460 3ftp_A 3-oxoacyl-[acyl-carrier 86.3 5.3 0.00018 38.2 11.4 82 178-261 27-117 (270)
461 2qhx_A Pteridine reductase 1; 86.2 16 0.00054 36.0 15.2 63 178-242 45-110 (328)
462 3uve_A Carveol dehydrogenase ( 86.0 6.4 0.00022 37.7 11.9 80 178-259 10-114 (286)
463 3imf_A Short chain dehydrogena 86.0 5.5 0.00019 37.6 11.3 79 178-258 5-92 (257)
464 3gk3_A Acetoacetyl-COA reducta 85.5 5.8 0.0002 37.7 11.2 81 178-260 24-114 (269)
465 1ae1_A Tropinone reductase-I; 85.5 7.2 0.00025 37.1 11.9 80 178-259 20-109 (273)
466 2zb4_A Prostaglandin reductase 85.5 0.77 2.6E-05 45.9 5.1 99 174-311 154-259 (357)
467 2cfc_A 2-(R)-hydroxypropyl-COM 85.5 3.8 0.00013 38.0 9.7 79 179-259 2-90 (250)
468 4fc7_A Peroxisomal 2,4-dienoyl 85.4 9 0.00031 36.6 12.5 80 178-258 26-114 (277)
469 3gaz_A Alcohol dehydrogenase s 85.3 1.4 4.7E-05 44.0 6.8 94 174-311 146-245 (343)
470 3sju_A Keto reductase; short-c 85.2 7.8 0.00027 37.1 12.0 82 178-261 23-113 (279)
471 3guy_A Short-chain dehydrogena 85.2 5.3 0.00018 36.8 10.5 119 181-314 3-131 (230)
472 3cxt_A Dehydrogenase with diff 85.1 7.1 0.00024 37.8 11.8 79 178-258 33-120 (291)
473 3nzo_A UDP-N-acetylglucosamine 84.9 11 0.00037 38.2 13.6 81 178-259 34-122 (399)
474 2pd4_A Enoyl-[acyl-carrier-pro 84.9 2.7 9.2E-05 40.2 8.5 78 178-258 5-93 (275)
475 3tsc_A Putative oxidoreductase 84.8 9.3 0.00032 36.3 12.4 81 178-260 10-112 (277)
476 3v2h_A D-beta-hydroxybutyrate 84.8 7.3 0.00025 37.4 11.6 81 179-260 25-115 (281)
477 3awd_A GOX2181, putative polyo 84.8 9.4 0.00032 35.5 12.2 79 178-258 12-99 (260)
478 3ijr_A Oxidoreductase, short c 84.8 14 0.00049 35.5 13.8 125 178-314 46-184 (291)
479 3r3s_A Oxidoreductase; structu 84.7 8.6 0.00029 37.2 12.2 124 178-314 48-187 (294)
480 4fn4_A Short chain dehydrogena 84.6 7.2 0.00025 37.6 11.4 79 178-258 6-93 (254)
481 3v8b_A Putative dehydrogenase, 84.4 6.7 0.00023 37.8 11.2 80 178-259 27-115 (283)
482 1sny_A Sniffer CG10964-PA; alp 84.3 6.1 0.00021 37.1 10.6 79 178-259 20-112 (267)
483 3pi7_A NADH oxidoreductase; gr 84.2 1.2 3.9E-05 44.5 5.7 95 177-311 162-262 (349)
484 3oid_A Enoyl-[acyl-carrier-pro 84.1 9 0.00031 36.2 11.8 80 178-259 3-92 (258)
485 2bd0_A Sepiapterin reductase; 84.1 5.9 0.0002 36.6 10.3 78 179-258 2-95 (244)
486 3enk_A UDP-glucose 4-epimerase 84.1 1.3 4.3E-05 43.4 5.8 80 178-258 4-87 (341)
487 1zsy_A Mitochondrial 2-enoyl t 84.0 2.1 7.1E-05 42.9 7.5 55 175-231 164-220 (357)
488 1hxh_A 3BETA/17BETA-hydroxyste 83.9 12 0.00043 34.9 12.6 77 178-259 5-90 (253)
489 3dqp_A Oxidoreductase YLBE; al 83.9 3.7 0.00013 37.4 8.6 69 181-261 2-75 (219)
490 2b4q_A Rhamnolipids biosynthes 83.9 6.1 0.00021 37.9 10.6 80 178-260 28-116 (276)
491 1gu7_A Enoyl-[acyl-carrier-pro 83.8 0.79 2.7E-05 45.9 4.3 55 175-231 163-220 (364)
492 3u5t_A 3-oxoacyl-[acyl-carrier 83.7 5.4 0.00018 38.1 10.1 124 178-314 26-163 (267)
493 4dqx_A Probable oxidoreductase 83.7 13 0.00043 35.7 12.8 123 178-314 26-161 (277)
494 2rhc_B Actinorhodin polyketide 83.6 7.1 0.00024 37.3 10.9 80 178-259 21-109 (277)
495 4a7p_A UDP-glucose dehydrogena 83.6 1.9 6.6E-05 45.2 7.2 120 186-330 13-146 (446)
496 1vl8_A Gluconate 5-dehydrogena 83.5 12 0.00041 35.5 12.4 81 178-260 20-110 (267)
497 3gdg_A Probable NADP-dependent 83.4 2.3 7.8E-05 40.3 7.2 83 178-261 19-113 (267)
498 3gvc_A Oxidoreductase, probabl 83.4 11 0.00038 36.1 12.3 77 178-259 28-113 (277)
499 3f9i_A 3-oxoacyl-[acyl-carrier 83.4 8.1 0.00028 35.9 11.0 80 177-261 12-96 (249)
500 4da9_A Short-chain dehydrogena 83.3 6.3 0.00022 37.9 10.5 79 178-258 28-116 (280)
No 1
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=2.3e-61 Score=491.26 Aligned_cols=309 Identities=38% Similarity=0.680 Sum_probs=275.4
Q ss_pred hHhHHHHhcChHHHHHHHHHhCCHHHHHHHHHHcCCCCCeEEEEcCCCCCHHHHHHHHHHcCCccCCCCcCCcccEEEec
Q 011002 65 KLDLGSYYGYNEFLIGALVEMFPPVELMELIESFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYD 144 (496)
Q Consensus 65 ~~~l~~~y~~p~wl~~~l~~~~~~~e~~~~lea~~~~~p~~iRvNtlk~~~~~l~~~L~~~G~~~~p~~~~~~~gl~~~~ 144 (496)
.++|+..|+||.||+++|.+.|| +++.+|+++++.++|+++|||++|++++++.+.|.+.|+.++++ +|++.++.+..
T Consensus 7 ~~~l~~~~~~P~w~~~~~~~~~g-~~~~~~~~~~~~~~p~~~RvN~~k~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~~ 84 (315)
T 1ixk_A 7 MLDKLLRLGYSKLFADRYFQLWG-ERAIRIAEAMEKPLPRCFRVNTLKISVQDLVKRLNKKGFQFKRV-PWAKEGFCLTR 84 (315)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHT-THHHHHHHHTTSCCCCEEEECTTTSCHHHHHHHHHHTTCEEEEE-TTEEEEEEEEE
T ss_pred HHHHHHHhCCcHHHHHHHHHHcc-HHHHHHHHHcCCCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeEC-CCCCceEEEeC
Confidence 35689999999999999999999 88999999999999999999999999999999999999999887 89999988765
Q ss_pred CCCCCCCCcccccceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH
Q 011002 145 SQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLH 224 (496)
Q Consensus 145 ~~~~i~~~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~ 224 (496)
...++..+++|..|+|++||.+|++++.++++++|++|||+|||||++|++|++++++.+.|+|+|+++.+++.+++|+.
T Consensus 85 ~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~ 164 (315)
T 1ixk_A 85 EPFSITSTPEFLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLS 164 (315)
T ss_dssp CSSCGGGSHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHH
T ss_pred CCCCcccChhHhcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 54568899999999999999999999999999999999999999999999999999877899999999999999999999
Q ss_pred HcCCceEEEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 011002 225 RMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS 304 (496)
Q Consensus 225 r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkp 304 (496)
++|+.|+.++++|+..++.. .+.||+|++||||||+|+++++|+++|.++..++..+...|..+|.++.++| ||
T Consensus 165 ~~g~~~v~~~~~D~~~~~~~--~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~L----kp 238 (315)
T 1ixk_A 165 RLGVLNVILFHSSSLHIGEL--NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVL----KP 238 (315)
T ss_dssp HHTCCSEEEESSCGGGGGGG--CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHE----EE
T ss_pred HhCCCeEEEEECChhhcccc--cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhC----CC
Confidence 99999999999999887642 3689999999999999999999999999999999999999999999999998 99
Q ss_pred CcEEEEEeCCCCCcCCHHHHHHHHHhCCcEEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceeEEEEEec
Q 011002 305 GGYIVYSTCSIMVTENEAVIDYALKKRDVKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKM 383 (496)
Q Consensus 305 GG~LVYSTCSl~~eENE~vV~~~L~~~~~~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~ 383 (496)
||+|||||||++++|||++|.++|++++++++++. .+.+|+..|....+.+.+..|+|++||.+++||||+|+|+|.
T Consensus 239 GG~lv~stcs~~~~Ene~~v~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGfF~A~l~k~ 315 (315)
T 1ixk_A 239 GGILVYSTCSLEPEENEFVIQWALDNFDVELLPLK--YGEPALTNPFGIELSEEIKNARRLYPDVHETSGFFIAKIRKL 315 (315)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHSSEEEECCC--SSEECCSSGGGCCCCGGGGGSEEECTTTSSSCSEEEEEEEEC
T ss_pred CCEEEEEeCCCChHHhHHHHHHHHhcCCCEEecCC--ccccCcccccccccccccCCEEEECCCCCCcccEEEEEEEEC
Confidence 99999999999999999999999999999988764 334565555544455556789999999999999999999984
No 2
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=5.1e-59 Score=495.74 Aligned_cols=297 Identities=31% Similarity=0.447 Sum_probs=261.6
Q ss_pred HhcChHHHHHHHHHhCCHHHHHHHHHHcCCCCC-eEEEEcCCCCCHHHHHHHHHHcCCccC---CCCcCCcccEEEecCC
Q 011002 71 YYGYNEFLIGALVEMFPPVELMELIESFEKPRP-ICLRTNTLKTRRRDLADVLINRGVNLD---PLSKWSKVGLVVYDSQ 146 (496)
Q Consensus 71 ~y~~p~wl~~~l~~~~~~~e~~~~lea~~~~~p-~~iRvNtlk~~~~~l~~~L~~~G~~~~---p~~~~~~~gl~~~~~~ 146 (496)
++++|+||+++|...||. ++.+|+++++.++| ++|||||+|+ +++.+.+ |+.++ |+ +|++.|++ . .
T Consensus 5 ~~~~P~w~~~~~~~~~g~-e~~~~~~a~~~~~~~~~lRvN~lk~--~~~~~~~---~~~~~~~~~~-~~~~~~~~--~-~ 74 (456)
T 3m4x_A 5 ATTLPQQFIKKYRLLLGE-EASDFFSALEQGSVKKGFRWNPLKP--AGLDMVQ---TYHSEELQPA-PYSNEGFL--G-T 74 (456)
T ss_dssp --CCCHHHHHHHHHHHGG-GHHHHHHHHHHCCCCCEEECCTTST--THHHHHH---HHTCSSCCBC-TTCTTEEE--S-C
T ss_pred hhhChHHHHHHHHHHhCH-HHHHHHHHcCCCCCCcEEEEcCccH--HHHHHhc---CCcccccCCC-CCCcceEE--c-C
Confidence 578999999999999995 69999999999999 9999999999 5665543 66676 77 89999987 2 2
Q ss_pred CCCCCCcccccceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc
Q 011002 147 VPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM 226 (496)
Q Consensus 147 ~~i~~~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~ 226 (496)
.++.+++|..|+|++||.+|++++.+|++++|++|||||||||++|++||+++++.|.|+|+|+++.+++.+++|++++
T Consensus 75 -~~~~~~~~~~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~ 153 (456)
T 3m4x_A 75 -VNGKSFLHQAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW 153 (456)
T ss_dssp -CCTTSHHHHTTSCEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred -CCCCChHHhCCcEEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc
Confidence 3589999999999999999999999999999999999999999999999999988899999999999999999999999
Q ss_pred CCceEEEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc
Q 011002 227 GVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG 306 (496)
Q Consensus 227 g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG 306 (496)
|+.||.++++|+..++... .+.||+||+||||||+|+++++|+++|.++..++..++.+|+++|..|+++| ||||
T Consensus 154 g~~nv~v~~~Da~~l~~~~-~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~L----kpGG 228 (456)
T 3m4x_A 154 GVSNAIVTNHAPAELVPHF-SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKML----KNKG 228 (456)
T ss_dssp TCSSEEEECCCHHHHHHHH-TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTE----EEEE
T ss_pred CCCceEEEeCCHHHhhhhc-cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhc----CCCc
Confidence 9999999999998775433 3689999999999999999999999999999999999999999999999998 9999
Q ss_pred EEEEEeCCCCCcCCHHHHHHHHHhCCcEEeecCCcCC-CCCcccccccccCCCcCCeeEecCCCCCCCceeEEEEEecCC
Q 011002 307 YIVYSTCSIMVTENEAVIDYALKKRDVKLVPCGLDFG-RQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMSN 385 (496)
Q Consensus 307 ~LVYSTCSl~~eENE~vV~~~L~~~~~~lv~~~~~~~-~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~~~ 385 (496)
+|||||||++++|||+||.++|++++++++++....+ .+|...|... +....++|++||.+++||||+|+|+|.+.
T Consensus 229 ~LvYsTCs~~~eEne~vv~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~r~~P~~~~~dGFF~A~l~k~~~ 305 (456)
T 3m4x_A 229 QLIYSTCTFAPEENEEIISWLVENYPVTIEEIPLTQSVSSGRSEWGSV---AGLEKTIRIWPHKDQGEGHFVAKLTFHGQ 305 (456)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHSSEEEECCCCSSCCEECCGGGSSS---TTGGGSEEECTTTSSSSCEEEEEEEECSC
T ss_pred EEEEEEeecccccCHHHHHHHHHhCCCEEEeccccccccccccccccc---cccCCeEEECCCCCCCcCeEEEEEEECCC
Confidence 9999999999999999999999999999888753221 1233333221 24467899999999999999999999864
Q ss_pred C
Q 011002 386 S 386 (496)
Q Consensus 386 ~ 386 (496)
.
T Consensus 306 ~ 306 (456)
T 3m4x_A 306 N 306 (456)
T ss_dssp C
T ss_pred C
Confidence 3
No 3
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=2.7e-58 Score=490.87 Aligned_cols=298 Identities=32% Similarity=0.509 Sum_probs=266.9
Q ss_pred ChHHHHHHHHHhCCHHHHHHHHHHcCCC-CCeEEEEcCCCCCHHHHHHHHHHcCCccCCCCcCCcccEEEecCCCCCCCC
Q 011002 74 YNEFLIGALVEMFPPVELMELIESFEKP-RPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGAT 152 (496)
Q Consensus 74 ~p~wl~~~l~~~~~~~e~~~~lea~~~~-~p~~iRvNtlk~~~~~l~~~L~~~G~~~~p~~~~~~~gl~~~~~~~~i~~~ 152 (496)
+|.||+++|...|| +++.+|+++++.+ +|++|||||+|++++++.+.| |+.++++ +|++.|+++.. ...++.+
T Consensus 2 lP~w~~~~~~~~~g-~e~~~~l~a~~~~~~~~~lRvN~lk~~~~~~~~~l---~~~~~~~-~~~~~g~~l~~-~~~~~~~ 75 (464)
T 3m6w_A 2 LPKAFLSRMAELLG-EEFPAFLKALTEGKRTYGLRVNTLKLPPEAFQRIS---PWPLRPI-PWCQEGFYYPE-EARPGPH 75 (464)
T ss_dssp CCHHHHHHHHHHHG-GGHHHHHHHHHTSCCCCEEEECTTTCCHHHHHHHC---SSCCEEE-TTEEEEEECCT-TCCCSSS
T ss_pred CcHHHHHHHHHHHH-HHHHHHHHHcCCCCCCeEEEEcCCCCCHHHHHHHc---CCCceec-CCCCceEEECC-CCCcccC
Confidence 79999999999999 5699999999999 999999999999999998877 7888887 89999988643 3457899
Q ss_pred cccccceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEE
Q 011002 153 PEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTI 232 (496)
Q Consensus 153 ~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~ 232 (496)
++|..|+|++||.+|++++.+|++++|++|||||||||++|++||+++++.|.|+|+|+++.+++.+++|++++|+. |.
T Consensus 76 ~~~~~G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~ 154 (464)
T 3m6w_A 76 PFFYAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LA 154 (464)
T ss_dssp HHHHTTSEEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CE
T ss_pred hHHhCCeEEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EE
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999998 99
Q ss_pred EEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 233 VCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 233 v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
++++|+..++... .+.||+||+||||||+|+++++|++.|.++..++..+..+|+++|..|+++| ||||+|||||
T Consensus 155 ~~~~Da~~l~~~~-~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~L----kpGG~LvysT 229 (464)
T 3m6w_A 155 VTQAPPRALAEAF-GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLL----GPGGVLVYST 229 (464)
T ss_dssp EECSCHHHHHHHH-CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTE----EEEEEEEEEE
T ss_pred EEECCHHHhhhhc-cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEe
Confidence 9999998776422 3689999999999999999999999999999999999999999999999998 9999999999
Q ss_pred CCCCCcCCHHHHHHHHHhC-CcEEeecCCcCC-CCCcccccccccCCCcCCeeEecCCCCCCCceeEEEEEecCC
Q 011002 313 CSIMVTENEAVIDYALKKR-DVKLVPCGLDFG-RQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMSN 385 (496)
Q Consensus 313 CSl~~eENE~vV~~~L~~~-~~~lv~~~~~~~-~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~~~ 385 (496)
||++++|||++|.++|+++ +++++++....+ .+|...|... .+.+..++|++||.+++||||+|+|+|.+.
T Consensus 230 Cs~~~eEne~vv~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~r~~P~~~~~dGfF~A~l~k~~~ 302 (464)
T 3m6w_A 230 CTFAPEENEGVVAHFLKAHPEFRLEDARLHPLFAPGVPEWGEG--NPELLKTARLWPHRLEGEGHFLARFRKEGG 302 (464)
T ss_dssp SCCCGGGTHHHHHHHHHHCTTEEEECCCCSTTSEECCGGGTTT--CGGGGGSEEECTTTSSSSCEEEEEEEECSC
T ss_pred ccCchhcCHHHHHHHHHHCCCcEEEecccccccccCccccccc--ccccCCeEEECCCCCCceeEEEEEEEECCC
Confidence 9999999999999999998 799988754322 2333323221 134567899999999999999999999854
No 4
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=2e-57 Score=487.05 Aligned_cols=301 Identities=35% Similarity=0.574 Sum_probs=262.5
Q ss_pred HhcChHHHHHHHHHhCCHH-HHHHHHHHcCCCCCeEEEEcCCCCCHHHHHHHHHHcCCccCCCCcCCcccEEEecC---C
Q 011002 71 YYGYNEFLIGALVEMFPPV-ELMELIESFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDS---Q 146 (496)
Q Consensus 71 ~y~~p~wl~~~l~~~~~~~-e~~~~lea~~~~~p~~iRvNtlk~~~~~l~~~L~~~G~~~~p~~~~~~~gl~~~~~---~ 146 (496)
.|++|.||+++|.+.||.+ ++.+|+++++.++|++|||||+|++++++.+.|...|+.++++ +|++.|+.+... .
T Consensus 5 ~~~~P~~~~~~~~~~~g~~~~~~~~~~a~~~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~ 83 (479)
T 2frx_A 5 TVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPYGWTLTPI-PWCEEGFWIERDNEDA 83 (479)
T ss_dssp --CCCHHHHHHHGGGCC----CHHHHHHHTSCCCCCEEECTTTCCHHHHHHHHGGGCCCCCEE-TTEEEEEC--------
T ss_pred cccCcHHHHHHHHHHcCccHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHcCCceeec-CCCCceEEEecCcccc
Confidence 5899999999999999976 6899999999999999999999999999999999999999998 899999876422 1
Q ss_pred CCCCCCcccccceEEEecCcchhHHHhcCCC--CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH
Q 011002 147 VPIGATPEYMAGFYMLQSASSFLPVMALAPQ--EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLH 224 (496)
Q Consensus 147 ~~i~~~~~~~~G~~~iQd~sS~l~v~~L~~~--~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~ 224 (496)
.+++.+++|..|.|++||++|++++.+|.++ +|++|||||||||++|++||+++++.|.|+|+|+++.|++.+++|++
T Consensus 84 ~~~~~~~~~~~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~ 163 (479)
T 2frx_A 84 LPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANIS 163 (479)
T ss_dssp -CGGGSHHHHTTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHH
T ss_pred cCcccChHHhCcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 2678899999999999999999999999998 99999999999999999999999888999999999999999999999
Q ss_pred HcCCceEEEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 011002 225 RMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS 304 (496)
Q Consensus 225 r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkp 304 (496)
++|+.||.++++|+..++... .+.||+||+||||||+|+++++|++.|.|+..++..++.+|+++|.+|+++| ||
T Consensus 164 r~g~~nv~~~~~D~~~~~~~~-~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~L----kp 238 (479)
T 2frx_A 164 RCGISNVALTHFDGRVFGAAV-PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHAL----RP 238 (479)
T ss_dssp HHTCCSEEEECCCSTTHHHHS-TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHE----EE
T ss_pred HcCCCcEEEEeCCHHHhhhhc-cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhc----CC
Confidence 999999999999998875422 3689999999999999999999999999999999999999999999999998 99
Q ss_pred CcEEEEEeCCCCCcCCHHHHHHHHHhCC-c-EEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceeEEEEEe
Q 011002 305 GGYIVYSTCSIMVTENEAVIDYALKKRD-V-KLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKK 382 (496)
Q Consensus 305 GG~LVYSTCSl~~eENE~vV~~~L~~~~-~-~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K 382 (496)
||+|||||||++++|||++|.++|++++ + +++++...+ +|.... .....++|++||.+++||||+|+|+|
T Consensus 239 GG~LvysTcs~~~~Ene~vv~~~l~~~~~~~~~~~~~~~~--~~~~~~------~~~~g~~r~~P~~~~~dGfF~A~l~k 310 (479)
T 2frx_A 239 GGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLF--PGANKA------LTEEGFLHVFPQIYDCEGFFVARLRK 310 (479)
T ss_dssp EEEEEEEESCCSSTTTHHHHHHHHHHSTTTEEECCCTTSS--TTGGGG------BCTTSCEEECTTTTTSCCEEEEEEEE
T ss_pred CCEEEEecccCCcccCHHHHHHHHHHCCCceecccccccc--cccccc------cccCCeEEECCCCCCcCccEEEEEEE
Confidence 9999999999999999999999999874 3 555543211 222110 01245689999999999999999999
Q ss_pred cCC
Q 011002 383 MSN 385 (496)
Q Consensus 383 ~~~ 385 (496)
.+.
T Consensus 311 ~~~ 313 (479)
T 2frx_A 311 TQA 313 (479)
T ss_dssp CSC
T ss_pred cCC
Confidence 864
No 5
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.2e-56 Score=477.40 Aligned_cols=299 Identities=33% Similarity=0.489 Sum_probs=273.7
Q ss_pred HhHHHHhcChHHHHHHHHHhCCHHHHHHHHHHcC-CCCCeEEEEcCCCCCHHHHHHHHHHcCCccCCCCcCCcccEEEec
Q 011002 66 LDLGSYYGYNEFLIGALVEMFPPVELMELIESFE-KPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYD 144 (496)
Q Consensus 66 ~~l~~~y~~p~wl~~~l~~~~~~~e~~~~lea~~-~~~p~~iRvNtlk~~~~~l~~~L~~~G~~~~p~~~~~~~gl~~~~ 144 (496)
..++..|++|.||+++|...|| +++.+|+++++ .++|+++|||++|++++++.+.|.+.|+.+.+. +|++.++.+.
T Consensus 149 ~~~~~~~~~P~w~~~~~~~~~g-~~~~~~~~a~~~~~~~~~~Rvn~~k~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~- 225 (450)
T 2yxl_A 149 EELEWKYLAPSWLIERVKGILG-DETEDFFRSVNKRHEWISIRVNTLKANVEEVIGELEEDGVEVVRS-ERVPTILKIK- 225 (450)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHG-GGHHHHHHHHHCCCCEEEEEECTTTCCHHHHHHHHHHTTCCEEEC-SSCTTEEEEE-
T ss_pred hhhhhHhcCcHHHHHHHHHHhh-HHHHHHHHhcCCCCCCEEEEEcCCCCCHHHHHHHHHhCCccceec-CccCceEEeC-
Confidence 4578899999999999999999 88999999999 999999999999999999999999999998887 8999998875
Q ss_pred CCCCCCCCcccccceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH
Q 011002 145 SQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLH 224 (496)
Q Consensus 145 ~~~~i~~~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~ 224 (496)
....+..++.|..|+|++||.+|++++.++++++|++|||+|||||++|++++.++++.+.|+|+|+++.+++.+++|+.
T Consensus 226 ~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~ 305 (450)
T 2yxl_A 226 GPYNFDTSSAFNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVK 305 (450)
T ss_dssp SCCCTTSCHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHH
T ss_pred CCCCcccCchhhCceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 33578899999999999999999999999999999999999999999999999999877899999999999999999999
Q ss_pred HcCCceEEEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 011002 225 RMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS 304 (496)
Q Consensus 225 r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkp 304 (496)
++|+.++.++++|+..++..+..+.||+||+||||||+|+++++|+++|.+++.++..+..+|..+|..+.++| +|
T Consensus 306 ~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~L----kp 381 (450)
T 2yxl_A 306 RMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLV----KP 381 (450)
T ss_dssp HTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTE----EE
T ss_pred HcCCCcEEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhc----CC
Confidence 99999999999999887644433679999999999999999999999999999999999999999999999997 99
Q ss_pred CcEEEEEeCCCCCcCCHHHHHHHHHhC-CcEEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceeEEEEEec
Q 011002 305 GGYIVYSTCSIMVTENEAVIDYALKKR-DVKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKM 383 (496)
Q Consensus 305 GG~LVYSTCSl~~eENE~vV~~~L~~~-~~~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~ 383 (496)
||+|||+|||++++|||++|..+|+++ +++++++...+ +++ ....++|++||.+++||||+|+|+|.
T Consensus 382 GG~lvy~tcs~~~~ene~~v~~~l~~~~~~~~~~~~~~~--~~~----------~~~~~~~~~P~~~~~dGff~a~l~k~ 449 (450)
T 2yxl_A 382 GGRLLYTTCSIFKEENEKNIRWFLNVHPEFKLVPLKSPY--DPG----------FLEGTMRAWPHRHSTIGFFYALLEKS 449 (450)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHCSSCEECCCCSSS--EEC----------SSTTCEEECHHHHSSCCEEEEEEECC
T ss_pred CcEEEEEeCCCChhhHHHHHHHHHHhCCCCEEeeccccc--ccc----------cCCCeEEECCCCCCCCceEEEEEEEC
Confidence 999999999999999999999999987 78988764332 111 23567999999999999999999984
No 6
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=4.8e-55 Score=462.23 Aligned_cols=290 Identities=31% Similarity=0.448 Sum_probs=263.6
Q ss_pred hHHHHhcChHHHHHHHHHhCCHHHHHHHHHHcCCCCCeEEEEcCCCCCHHHHHHHHHHcCCccCCCCcCCcccEEEecCC
Q 011002 67 DLGSYYGYNEFLIGALVEMFPPVELMELIESFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQ 146 (496)
Q Consensus 67 ~l~~~y~~p~wl~~~l~~~~~~~e~~~~lea~~~~~p~~iRvNtlk~~~~~l~~~L~~~G~~~~p~~~~~~~gl~~~~~~ 146 (496)
.++ .|++|.||+++|.+.|| +++.+|+++++.++|+++|||++|++++++.+.|...|+.+.+. +|++.++++. ..
T Consensus 139 ~~~-~~~~p~w~~~~~~~~~g-~~~~~~~~~~~~~~~~~~Rvn~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~~-~~ 214 (429)
T 1sqg_A 139 SDA-RYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPH-ADYPDAVRLE-TP 214 (429)
T ss_dssp SGG-GGCSCHHHHHHHHHHCT-TTHHHHHHHHTSCCCEEEEECTTTCCHHHHHHHHHHTTCCEECC-TTCTTEEEES-SC
T ss_pred hhh-hhcCcHHHHHHHHHHhh-HHHHHHHHhCCCCCCeEEEEcCCCCCHHHHHHHHHhCCCceeec-CCCCCEEEEC-CC
Confidence 345 79999999999999999 78999999999999999999999999999999999999999887 8999998774 34
Q ss_pred CCCCCCcccccceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc
Q 011002 147 VPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM 226 (496)
Q Consensus 147 ~~i~~~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~ 226 (496)
.++..+++|..|+|++||.+|++++.++++++|++|||+|||||++|+++++++++ +.|+|+|+++.+++.+++|+.++
T Consensus 215 ~~~~~~~~~~~G~~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~ 293 (429)
T 1sqg_A 215 APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRL 293 (429)
T ss_dssp CCGGGSTTGGGTSEEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHT
T ss_pred CCcccChHHhCCCeEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHc
Confidence 57888999999999999999999999999999999999999999999999999876 89999999999999999999999
Q ss_pred CCceEEEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc
Q 011002 227 GVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG 306 (496)
Q Consensus 227 g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG 306 (496)
|+. +.++++|+..++..+..+.||+||+||||||+|+++++|+++|.++..++..+..+|..+|.+++++| +|||
T Consensus 294 g~~-~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~L----kpGG 368 (429)
T 1sqg_A 294 GMK-ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL----KTGG 368 (429)
T ss_dssp TCC-CEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGE----EEEE
T ss_pred CCC-eEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhc----CCCC
Confidence 984 78889999887643444689999999999999999999999999999999999999999999999997 9999
Q ss_pred EEEEEeCCCCCcCCHHHHHHHHHhC-CcEEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceeEEEEEec
Q 011002 307 YIVYSTCSIMVTENEAVIDYALKKR-DVKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKM 383 (496)
Q Consensus 307 ~LVYSTCSl~~eENE~vV~~~L~~~-~~~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~ 383 (496)
+|||||||++++||+++|..+|+++ ++++++. |. ....+++++||.+++||||+|+|+|.
T Consensus 369 ~lvystcs~~~~ene~~v~~~l~~~~~~~~~~~-------~~----------~~~~~~~~~P~~~~~dGff~a~l~k~ 429 (429)
T 1sqg_A 369 TLVYATCSVLPEENSLQIKAFLQRTADAELCET-------GT----------PEQPGKQNLPGAEEGDGFFYAKLIKK 429 (429)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHCTTCEECSS-------BC----------SSSBSEEECCCTTSCCSEEEEEEEC-
T ss_pred EEEEEECCCChhhHHHHHHHHHHhCCCCEEeCC-------CC----------CCCCeEEECCCCCCCCceEEEEEEEC
Confidence 9999999999999999999999887 7888761 11 01234799999999999999999873
No 7
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=8.7e-55 Score=442.51 Aligned_cols=273 Identities=32% Similarity=0.446 Sum_probs=220.5
Q ss_pred CCCCCeEEEEcCCCCCHHHHHHHHHHcCCccCCCCcCC------------------cccEEEecCCCCCCCCcccccceE
Q 011002 99 EKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWS------------------KVGLVVYDSQVPIGATPEYMAGFY 160 (496)
Q Consensus 99 ~~~~p~~iRvNtlk~~~~~l~~~L~~~G~~~~p~~~~~------------------~~gl~~~~~~~~i~~~~~~~~G~~ 160 (496)
..++|+++||||+|++++++.+.|.+.|+.+++. +|+ +.++.+ ....++..+++|..|+|
T Consensus 7 ~~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~~~~~~~~~~~~~G~~ 84 (309)
T 2b9e_A 7 ASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGR-ASSLDDLRALKGKHFLLDPLMPELLVF-PAQTDLHEHPLYRAGHL 84 (309)
T ss_dssp --CCCEEEEECTTTCCHHHHHHHHHHTTCEEEEE-CSSHHHHHTCCTTEEEECSSSTTEEEE-CTTCCCTTSHHHHTTSE
T ss_pred CCCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeec-cccccccccccccccccccCCCceEEe-CCCCCcccChHHHCCeE
Confidence 4678999999999999999999999999988775 444 334443 33457889999999999
Q ss_pred EEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCC
Q 011002 161 MLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNE 240 (496)
Q Consensus 161 ~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~ 240 (496)
++||.+|++++.+|++++|++|||+|||||++|++||.++++.|.|+|+|+++.+++.+++|++++|+.|+.++++|+..
T Consensus 85 ~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~ 164 (309)
T 2b9e_A 85 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLA 164 (309)
T ss_dssp EECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGG
T ss_pred EEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHh
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999987
Q ss_pred CccccC-CCCCCEEEECCCCCCCCcccCCchhhccC--CHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 011002 241 LPKVLG-LNTVDRVLLDAPCSGTGVISKDESVKTSK--SLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 241 l~~~~~-~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~--s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~ 317 (496)
++.... ...||+||+||||||+|+++++|+++|.+ +..++..+..+|++||.+|++++ + ||+|||||||+++
T Consensus 165 ~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l----~-gG~lvYsTCs~~~ 239 (309)
T 2b9e_A 165 VSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFP----S-LQRLVYSTCSLCQ 239 (309)
T ss_dssp SCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCT----T-CCEEEEEESCCCG
T ss_pred cCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhcc----C-CCEEEEECCCCCh
Confidence 653211 14799999999999999999999998854 67899999999999999999876 6 9999999999999
Q ss_pred cCCHHHHHHHHHhC-C-cEEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceeEEEEEecC
Q 011002 318 TENEAVIDYALKKR-D-VKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMS 384 (496)
Q Consensus 318 eENE~vV~~~L~~~-~-~~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~~ 384 (496)
+|||++|.++|+++ + ++++++...+...|+.. .+....|+|++||.+++||||+|+|+|.+
T Consensus 240 ~Ene~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~r~~P~~~~~dGfF~A~l~k~~ 302 (309)
T 2b9e_A 240 EENEDVVRDALQQNPGAFRLAPALPAWPHRGLST------FPGAEHCLRASPETTLSSGFFVAVIERVE 302 (309)
T ss_dssp GGTHHHHHHHHTTSTTTEEECCCCTTCCCBCCSS------STTGGGSEEECHHHHSSCSEEEEEEEEC-
T ss_pred HHhHHHHHHHHHhCCCcEEEeccccccccccccc------cCCCCCeEEECCCCCCCCCeEEEEEEECC
Confidence 99999999999987 5 88887643333233321 12345789999999999999999999975
No 8
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=2.1e-53 Score=439.87 Aligned_cols=290 Identities=26% Similarity=0.370 Sum_probs=231.1
Q ss_pred HhCCHHHHHHHHHHcCCCCCeEEEEcCCCCCHHHHHHHHHHcCCc-----------cC--------CC-CcCC-cccE--
Q 011002 84 EMFPPVELMELIESFEKPRPICLRTNTLKTRRRDLADVLINRGVN-----------LD--------PL-SKWS-KVGL-- 140 (496)
Q Consensus 84 ~~~~~~e~~~~lea~~~~~p~~iRvNtlk~~~~~l~~~L~~~G~~-----------~~--------p~-~~~~-~~gl-- 140 (496)
..|| ++|..|.+++..+++..+|+|++. ..+++...|...|.. ++ |. ..|. +..+
T Consensus 29 ~~~G-~~W~~~r~aL~~~~~~~a~vN~f~-~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~ 106 (359)
T 4fzv_A 29 VQFG-DLWPSIRVSLLSEQKYGALVNNFA-AWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPNLRC 106 (359)
T ss_dssp HHHG-GGHHHHHHHHTSCCCCEEEECTTS-CHHHHHHHHHHTTCEEHHHHHHHTTTCCC-----CCSSCHHHHSCSSCCE
T ss_pred HHhh-hhhHHHHHHHcCcchhEEEeccCC-ChHHHHHHHHhccCccchhhhhcccccccccccccCCCcccccCCccceE
Confidence 4567 579999999999999999999985 568888888877652 00 00 0111 1122
Q ss_pred EEecCCCCCCCCcccccc-----eEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHH
Q 011002 141 VVYDSQVPIGATPEYMAG-----FYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASR 215 (496)
Q Consensus 141 ~~~~~~~~i~~~~~~~~G-----~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~r 215 (496)
++++ ...+..+|.|..| .|++||.+||+++.+|+++||++||||||||||||++||+++.+ |.|+|+|+++.|
T Consensus 107 ~~~~-~g~~~~~p~~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~-~~l~A~D~~~~R 184 (359)
T 4fzv_A 107 FTFD-RGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCC-RNLAANDLSPSR 184 (359)
T ss_dssp EECC-TTCCCCCCCCCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCE-EEEEEECSCHHH
T ss_pred EecC-CCChhcCCCcccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCC-CcEEEEcCCHHH
Confidence 2222 2355667766654 58899999999999999999999999999999999999998754 789999999999
Q ss_pred HHHHHHHHHHcCC------ceEEEEecCCCCCccccCCCCCCEEEECCCCCCC--CcccCCchhhccCCHHHHHHHHHHH
Q 011002 216 LKSLTANLHRMGV------TNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGT--GVISKDESVKTSKSLEDIQKCSYLQ 287 (496)
Q Consensus 216 l~~l~~nl~r~g~------~nv~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~--Gvi~r~p~i~~~~s~~~i~~l~~lQ 287 (496)
++.+++|++++|+ .++.+++.|++.++... .+.||+||+||||||+ |+++++|+++|.++..++..++.+|
T Consensus 185 ~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~-~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ 263 (359)
T 4fzv_A 185 IARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE-GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQ 263 (359)
T ss_dssp HHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS-TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHH
T ss_pred HHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc-cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHH
Confidence 9999999999987 36899999998876543 3789999999999997 7889999999999999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhC-CcEEeec---CCcCCCCCcccccccccCCCcCCee
Q 011002 288 KQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKR-DVKLVPC---GLDFGRQGFVRFREHRFHPSLEKTR 363 (496)
Q Consensus 288 ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~-~~~lv~~---~~~~~~~g~~~~~~~~f~~~~~~~~ 363 (496)
++||.+|+.+| ||||+|||||||++++|||+||++||+++ ++..+++ .+.....++ .....|.+....++
T Consensus 264 ~~iL~~a~~~l----kpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~g~ 337 (359)
T 4fzv_A 264 VQLLAAGLLAT----KPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVF--MDTFCFFSSCQVGE 337 (359)
T ss_dssp HHHHHHHHHTE----EEEEEEEEEESCCCTTTTHHHHHHHHHHHHHHHCCCEEECCCHHHHHHH--TTTCEECTTCSSSE
T ss_pred HHHHHHHHhcC----CCCcEEEEEeCCCchhhCHHHHHHHHHhCCCCccccccccccccccccc--ccccccCccccceE
Confidence 99999999998 99999999999999999999999999875 3222221 111000000 12234566777889
Q ss_pred EecCCCC-CCCceeEEEEEecC
Q 011002 364 RFYPHVH-NMDGFFVAKLKKMS 384 (496)
Q Consensus 364 r~~P~~~-~~dGFFvA~l~K~~ 384 (496)
|++||.+ ++||||+|+|+|.+
T Consensus 338 r~~P~~~~~~gGFFiA~L~KvS 359 (359)
T 4fzv_A 338 LVIPNLMANFGPMYFCKMRRLT 359 (359)
T ss_dssp EEECBTTBCCCCEEEEEEEECC
T ss_pred EECCCCCCCCCCEEEEEEEECC
Confidence 9999976 67889999999975
No 9
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=6.3e-49 Score=391.45 Aligned_cols=270 Identities=43% Similarity=0.642 Sum_probs=220.9
Q ss_pred HHHcCCCCCeEEEEcCCCCCHHHHHHHHHHcCCccCCCCcCCcccEEEecCCCCCCCCcccccceEEEecCcchhHHHhc
Q 011002 95 IESFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMAL 174 (496)
Q Consensus 95 lea~~~~~p~~iRvNtlk~~~~~l~~~L~~~G~~~~p~~~~~~~gl~~~~~~~~i~~~~~~~~G~~~iQd~sS~l~v~~L 174 (496)
|.++..++|+++|||++|++++++.+.|.+.|+.+++ +|++.++.+.+.+.++..++.|..|+|++|+.+|++++.++
T Consensus 2 m~~~~~~~~~~~rvn~~~~~~~~~~~~l~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l 79 (274)
T 3ajd_A 2 MIVYKGEKMQFIRVNTLKINPEVLKKRLENKGVVLEK--TFLDYAFEVKKSPFSIGSTPEYLFGYYMPQSISSMIPPIVL 79 (274)
T ss_dssp -------CCEEEEECTTTCCHHHHHHHHHTTTCEEEE--CSSTTEEEEEECSSCTTSSHHHHTTSEEECCSGGGHHHHHH
T ss_pred hhhhCCCCCeEEEEeCCCCCHHHHHHHHHHCCCeecC--CCCCceEEEecCCCCcccChhhhCCeEEEeCHHHHHHHHHh
Confidence 4556788999999999999999999999999998887 79999988744456788999999999999999999999999
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--CCCCCCE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--GLNTVDR 252 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--~~~~FD~ 252 (496)
++++|++|||+|||||++|+++++++++.+.|+|+|+++.+++.+++|+.++|+.++.++++|+..++..+ ..+.||+
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~ 159 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDK 159 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCE
Confidence 99999999999999999999999998877899999999999999999999999999999999998765321 1368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhC-
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKR- 331 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~- 331 (496)
|++||||||+|+++++| .|+..++..+...|.++|..++++| +|||+|||+|||++++|||++|.++|+++
T Consensus 160 Vl~d~Pcs~~g~~~~~p----~~~~~~~~~~~~~~~~~l~~~~~~L----kpgG~lv~stcs~~~~ene~~v~~~l~~~~ 231 (274)
T 3ajd_A 160 ILLDAPCSGNIIKDKNR----NVSEEDIKYCSLRQKELIDIGIDLL----KKDGELVYSTCSMEVEENEEVIKYILQKRN 231 (274)
T ss_dssp EEEEECCC----------------HHHHTGGGTCHHHHHHHHHHHE----EEEEEEEEEESCCCTTSSHHHHHHHHHHCS
T ss_pred EEEcCCCCCCcccccCC----CCCHHHHHHHHHHHHHHHHHHHHhC----CCCCEEEEEECCCChHHhHHHHHHHHHhCC
Confidence 99999999999999998 5788888889999999999999998 99999999999999999999999999876
Q ss_pred CcEEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceeEEEEEec
Q 011002 332 DVKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKM 383 (496)
Q Consensus 332 ~~~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~ 383 (496)
+++++++... ..+|+..|.. ....++|++||.++ ||+|+|+|.
T Consensus 232 ~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~P~~~~---ff~a~l~k~ 274 (274)
T 3ajd_A 232 DVELIIIKAN-EFKGINIKEG-----YIKGTLRVFPPNEP---FFIAKLRKI 274 (274)
T ss_dssp SEEEECCCST-TCTTSCEEEC-----SSTTCEEECTTSCC---EEEEEEEEC
T ss_pred CcEEecCccc-cccCcccccc-----cCCCeEEECCCCCC---EEEEEEEEC
Confidence 7898887532 1244433321 23578999999764 999999984
No 10
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.76 E-value=1.1e-18 Score=182.54 Aligned_cols=162 Identities=19% Similarity=0.225 Sum_probs=128.6
Q ss_pred CcccccceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceE
Q 011002 152 TPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNT 231 (496)
Q Consensus 152 ~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv 231 (496)
...+.+|.|+.|..+..++...+ ++|.+|||+|||+|++|+++|.. + ..|+|+|+|+.+++.+++|+..+|+.+
T Consensus 190 ~~~~~tG~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~--g-a~V~avDis~~al~~a~~n~~~ng~~~- 263 (393)
T 4dmg_A 190 ALAQKTGYYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARK--G-AYALAVDKDLEALGVLDQAALRLGLRV- 263 (393)
T ss_dssp TTCCTTSSCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT--T-CEEEEEESCHHHHHHHHHHHHHHTCCC-
T ss_pred hhccccCcCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc--C-CeEEEEECCHHHHHHHHHHHHHhCCCC-
Confidence 45678899999998877766544 46999999999999999999885 2 349999999999999999999999974
Q ss_pred EEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 232 IVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 232 ~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
.+.++|+..+..... +.||+|++||||... +..++......+.+++..++++| +|||+|+|+
T Consensus 264 ~~~~~D~~~~l~~~~-~~fD~Ii~dpP~f~~-------------~~~~~~~~~~~~~~ll~~a~~~L----kpGG~Lv~~ 325 (393)
T 4dmg_A 264 DIRHGEALPTLRGLE-GPFHHVLLDPPTLVK-------------RPEELPAMKRHLVDLVREALRLL----AEEGFLWLS 325 (393)
T ss_dssp EEEESCHHHHHHTCC-CCEEEEEECCCCCCS-------------SGGGHHHHHHHHHHHHHHHHHTE----EEEEEEEEE
T ss_pred cEEEccHHHHHHHhc-CCCCEEEECCCcCCC-------------CHHHHHHHHHHHHHHHHHHHHhc----CCCCEEEEE
Confidence 455889877543332 349999999998432 23456677778889999999997 999999999
Q ss_pred eCCCCCcCCH--HHHHHHHHhC--CcEEee
Q 011002 312 TCSIMVTENE--AVIDYALKKR--DVKLVP 337 (496)
Q Consensus 312 TCSl~~eENE--~vV~~~L~~~--~~~lv~ 337 (496)
|||....+++ .+|..++... .++++.
T Consensus 326 s~s~~~~~~~f~~~v~~a~~~~g~~~~i~~ 355 (393)
T 4dmg_A 326 SCSYHLRLEDLLEVARRAAADLGRRLRVHR 355 (393)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ECCCCCCHHHHHHHHHHHHHHhCCeEEEEE
Confidence 9999988877 6676666543 455543
No 11
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.75 E-value=8.5e-18 Score=163.92 Aligned_cols=133 Identities=14% Similarity=0.139 Sum_probs=104.2
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc-cCCCCCCEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~-~~~~~FD~V 253 (496)
.+++|++|||+|||||++|.++|+++++.|.|+|+|+++.+++.+.+.+... .|+.++.+|++..... ...+.||+|
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~~~~~~~D~I 150 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYKSVVENVDVL 150 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTTTTCCCEEEE
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhhccccceEEE
Confidence 3789999999999999999999999988899999999999987777666543 5899999999865321 113689999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHH-hhhhcCCCCcEEEEE---eC---CCCCcCCHHHHHH
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAID-MVDANSKSGGYIVYS---TC---SIMVTENEAVIDY 326 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~-~L~~~lkpGG~LVYS---TC---Sl~~eENE~vV~~ 326 (496)
++|.|- ..|.++|...+. +| ||||+|+++ +| ++.++||.+.+..
T Consensus 151 ~~d~a~-------------------------~~~~~il~~~~~~~L----kpGG~lvisik~~~~d~t~~~~e~~~~~~~ 201 (232)
T 3id6_C 151 YVDIAQ-------------------------PDQTDIAIYNAKFFL----KVNGDMLLVIKARSIDVTKDPKEIYKTEVE 201 (232)
T ss_dssp EECCCC-------------------------TTHHHHHHHHHHHHE----EEEEEEEEEEC-------CCSSSSTTHHHH
T ss_pred EecCCC-------------------------hhHHHHHHHHHHHhC----CCCeEEEEEEccCCcccCCCHHHHHHHHHH
Confidence 999761 123444544444 65 999999977 89 9999999999999
Q ss_pred HHHhCCcEEeec
Q 011002 327 ALKKRDVKLVPC 338 (496)
Q Consensus 327 ~L~~~~~~lv~~ 338 (496)
+|+.++|+++..
T Consensus 202 ~L~~~gf~~~~~ 213 (232)
T 3id6_C 202 KLENSNFETIQI 213 (232)
T ss_dssp HHHHTTEEEEEE
T ss_pred HHHHCCCEEEEE
Confidence 999888887764
No 12
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.74 E-value=7.1e-17 Score=158.17 Aligned_cols=166 Identities=16% Similarity=0.181 Sum_probs=117.0
Q ss_pred cceEEEecCc-------chhHHHhcCCC-CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC
Q 011002 157 AGFYMLQSAS-------SFLPVMALAPQ-EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV 228 (496)
Q Consensus 157 ~G~~~iQd~s-------S~l~v~~L~~~-~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~ 228 (496)
.++.++|+.. +.+++.++.+. ++.+|||+|||+|..++.++.... +.|+|+|+++.+++.+++|+..+++
T Consensus 20 ~~~~i~q~~~~~~~~~d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~ 97 (259)
T 3lpm_A 20 ENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQL 97 (259)
T ss_dssp TTEEEEEBTTTBCCCHHHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCCccCcHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCC
Confidence 3556677766 66777788888 899999999999999999988743 4999999999999999999999999
Q ss_pred c-eEEEEecCCCCCccccCCCCCCEEEECCCCCCC---CcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 011002 229 T-NTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGT---GVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS 304 (496)
Q Consensus 229 ~-nv~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~---Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkp 304 (496)
. ++.++++|+..++..+..+.||+|++||||... |....++...... . ........++..+.++| +|
T Consensus 98 ~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~--~---~~~~~~~~~l~~~~~~L----kp 168 (259)
T 3lpm_A 98 EDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIAR--H---EVMCTLEDTIRVAASLL----KQ 168 (259)
T ss_dssp TTTEEEECSCGGGGGGTSCTTCEEEEEECCCC----------------------------HHHHHHHHHHHHHE----EE
T ss_pred cccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhh--c---cccCCHHHHHHHHHHHc----cC
Confidence 7 499999999887654445789999999999766 4433322211111 0 11122346788888887 99
Q ss_pred CcEEEEEeCCCCCcCCHHHHHHHHHhCCcEEee
Q 011002 305 GGYIVYSTCSIMVTENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 305 GG~LVYSTCSl~~eENE~vV~~~L~~~~~~lv~ 337 (496)
||+|+++. +.+....+..++...++.+..
T Consensus 169 gG~l~~~~----~~~~~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 169 GGKANFVH----RPERLLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp EEEEEEEE----CTTTHHHHHHHHHHTTEEEEE
T ss_pred CcEEEEEE----cHHHHHHHHHHHHHCCCceEE
Confidence 99999843 445555566667776655443
No 13
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.70 E-value=1e-17 Score=173.99 Aligned_cols=162 Identities=24% Similarity=0.292 Sum_probs=126.8
Q ss_pred CcccccceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceE
Q 011002 152 TPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNT 231 (496)
Q Consensus 152 ~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv 231 (496)
...+..|+|..|.....++..+ +|.+|||+|||+|+++++++.. ...|+|+|+++.+++.+++|+..+|+.++
T Consensus 187 ~~~~~~g~f~~~~~~~~~~~~~----~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~ 259 (382)
T 1wxx_A 187 RAGQKTGAYLDQRENRLYMERF----RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNV 259 (382)
T ss_dssp STTSCCCCCGGGHHHHHHGGGC----CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTE
T ss_pred hhcccCccccchHHHHHHHHhc----CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCc
Confidence 4467778888777655444332 7889999999999999999987 36899999999999999999999999889
Q ss_pred EEEecCCCCCcccc--CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEE
Q 011002 232 IVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIV 309 (496)
Q Consensus 232 ~v~~~D~~~l~~~~--~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LV 309 (496)
.++++|+..+...+ ....||+|++|||+.+.+ ...+......+..++..++++| +|||+|+
T Consensus 260 ~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~-------------~~~~~~~~~~~~~~l~~~~~~L----kpgG~l~ 322 (382)
T 1wxx_A 260 RVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKG-------------KKDVERAYRAYKEVNLRAIKLL----KEGGILA 322 (382)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCS-------------TTSHHHHHHHHHHHHHHHHHTE----EEEEEEE
T ss_pred eEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCC-------------hhHHHHHHHHHHHHHHHHHHhc----CCCCEEE
Confidence 99999987653221 136899999999986543 1234556677788999999997 9999999
Q ss_pred EEeCCCCCcCC--HHHHHHHHHhC--CcEEee
Q 011002 310 YSTCSIMVTEN--EAVIDYALKKR--DVKLVP 337 (496)
Q Consensus 310 YSTCSl~~eEN--E~vV~~~L~~~--~~~lv~ 337 (496)
|++|+....++ +.++...+... .++++.
T Consensus 323 ~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~ 354 (382)
T 1wxx_A 323 TASCSHHMTEPLFYAMVAEAAQDAHRLLRVVE 354 (382)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEECCCCCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 99999887765 56666555544 455554
No 14
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.69 E-value=2.6e-17 Score=183.75 Aligned_cols=174 Identities=14% Similarity=0.110 Sum_probs=128.9
Q ss_pred CCcccEEEecCCCCCCCCcccccceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHH
Q 011002 135 WSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKAS 214 (496)
Q Consensus 135 ~~~~gl~~~~~~~~i~~~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~ 214 (496)
+.+.|+.+. +.....+.+|.|+.|.....++.... +|.+|||+|||+|+++++++.. +...|+++|+|+.
T Consensus 504 v~E~g~~~~-----v~~~~~~~tG~f~d~r~~r~~l~~~~---~g~~VLDlg~GtG~~sl~aa~~--ga~~V~aVD~s~~ 573 (703)
T 3v97_A 504 VTEYNAHLW-----VNLTDYLDTGLFLDHRIARRMLGQMS---KGKDFLNLFSYTGSATVHAGLG--GARSTTTVDMSRT 573 (703)
T ss_dssp EEETTEEEE-----ECSSSSSSCSCCGGGHHHHHHHHHHC---TTCEEEEESCTTCHHHHHHHHT--TCSEEEEEESCHH
T ss_pred EEECCEEEE-----EeccccccCCCcccHHHHHHHHHHhc---CCCcEEEeeechhHHHHHHHHC--CCCEEEEEeCCHH
Confidence 445666542 22245678899999988776665543 6899999999999999998873 4468999999999
Q ss_pred HHHHHHHHHHHcCCc--eEEEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHH
Q 011002 215 RLKSLTANLHRMGVT--NTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLIL 292 (496)
Q Consensus 215 rl~~l~~nl~r~g~~--nv~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~ 292 (496)
+++.+++|++.+|+. ++.++++|+..+.... .+.||+|++||||.+.+... .++......+.+++.
T Consensus 574 al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~-~~~fD~Ii~DPP~f~~~~~~-----------~~~~~~~~~~~~ll~ 641 (703)
T 3v97_A 574 YLEWAERNLRLNGLTGRAHRLIQADCLAWLREA-NEQFDLIFIDPPTFSNSKRM-----------EDAFDVQRDHLALMK 641 (703)
T ss_dssp HHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC-CCCEEEEEECCCSBC------------------CCBHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCccceEEEecCHHHHHHhc-CCCccEEEECCccccCCccc-----------hhHHHHHHHHHHHHH
Confidence 999999999999997 6999999997753222 36899999999997643210 011123456778999
Q ss_pred HHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEEeec
Q 011002 293 AAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 293 ~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~~lv~~ 338 (496)
.+.++| +|||+|++|+|+.....+++. +.+.++++..+
T Consensus 642 ~a~~~L----kpgG~L~~s~~~~~~~~~~~~----l~~~g~~~~~i 679 (703)
T 3v97_A 642 DLKRLL----RAGGTIMFSNNKRGFRMDLDG----LAKLGLKAQEI 679 (703)
T ss_dssp HHHHHE----EEEEEEEEEECCTTCCCCHHH----HHHTTEEEEEC
T ss_pred HHHHhc----CCCcEEEEEECCcccccCHHH----HHHcCCceeee
Confidence 999997 999999999999666666544 44566665444
No 15
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.68 E-value=5.8e-17 Score=168.94 Aligned_cols=159 Identities=21% Similarity=0.201 Sum_probs=122.3
Q ss_pred cccccceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eE
Q 011002 153 PEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NT 231 (496)
Q Consensus 153 ~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv 231 (496)
..+..|+|..|.....++..++ ++|.+|||+|||+|+++++++.. +.+.|+|+|+++.+++.+++|+..+|+. ++
T Consensus 194 ~~~~tg~f~~~~~~~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v 269 (396)
T 2as0_A 194 RGQKTGFFLDQRENRLALEKWV--QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVEDRM 269 (396)
T ss_dssp SSSSSCCCSTTHHHHHHHGGGC--CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCGGGE
T ss_pred cccccCccCCHHHHHHHHHHHh--hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccc
Confidence 3466788876665555544432 47899999999999999999875 3468999999999999999999999997 79
Q ss_pred EEEecCCCCCcccc--CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEE
Q 011002 232 IVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIV 309 (496)
Q Consensus 232 ~v~~~D~~~l~~~~--~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LV 309 (496)
.++++|+..+...+ ....||+|++|||+.+.+ ...+......+..++..++++| +|||+|+
T Consensus 270 ~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~-------------~~~~~~~~~~~~~~l~~~~~~L----kpgG~lv 332 (396)
T 2as0_A 270 KFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQH-------------EKDLKAGLRAYFNVNFAGLNLV----KDGGILV 332 (396)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSS-------------GGGHHHHHHHHHHHHHHHHTTE----EEEEEEE
T ss_pred eEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCC-------------HHHHHHHHHHHHHHHHHHHHhc----CCCcEEE
Confidence 99999987653221 136899999999976532 2344555667788899999987 9999999
Q ss_pred EEeCCCCCcCC--HHHHHHHHHhCC
Q 011002 310 YSTCSIMVTEN--EAVIDYALKKRD 332 (496)
Q Consensus 310 YSTCSl~~eEN--E~vV~~~L~~~~ 332 (496)
|++|+.+..++ +.++...+...+
T Consensus 333 ~~~~~~~~~~~~~~~~v~~~~~~~~ 357 (396)
T 2as0_A 333 TCSCSQHVDLQMFKDMIIAAGAKAG 357 (396)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHHHHcC
Confidence 99999776543 556665555544
No 16
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.66 E-value=2.8e-17 Score=171.40 Aligned_cols=166 Identities=17% Similarity=0.187 Sum_probs=125.4
Q ss_pred CCCcccccceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-
Q 011002 150 GATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV- 228 (496)
Q Consensus 150 ~~~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~- 228 (496)
.....+.+|+|..|.....++..+ .+|.+|||+|||+|++++++|.. +.+.|+|+|+++.+++.+++|+..+|+
T Consensus 195 ~~~~~~~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al~~a~~n~~~ngl~ 269 (396)
T 3c0k_A 195 DIQHGHKTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEALDIARQNVELNKLD 269 (396)
T ss_dssp CTTTSSTTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred eccccccCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 345567789998887766665554 47899999999999999999885 246899999999999999999999999
Q ss_pred c-eEEEEecCCCCCcccc--CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC
Q 011002 229 T-NTIVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG 305 (496)
Q Consensus 229 ~-nv~v~~~D~~~l~~~~--~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpG 305 (496)
. ++.++.+|+..+...+ ....||+|++|||+.+.+-- .+......+..++..++++| +||
T Consensus 270 ~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~-------------~~~~~~~~~~~~l~~~~~~L----kpg 332 (396)
T 3c0k_A 270 LSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKS-------------QLMGACRGYKDINMLAIQLL----NEG 332 (396)
T ss_dssp GGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSS-------------SSSCCCTHHHHHHHHHHHTE----EEE
T ss_pred ccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChh-------------HHHHHHHHHHHHHHHHHHhc----CCC
Confidence 7 8999999987653221 13589999999998654310 00111233566788899987 999
Q ss_pred cEEEEEeCCCCCc--CCHHHHHHHHHhC--CcEEee
Q 011002 306 GYIVYSTCSIMVT--ENEAVIDYALKKR--DVKLVP 337 (496)
Q Consensus 306 G~LVYSTCSl~~e--ENE~vV~~~L~~~--~~~lv~ 337 (496)
|+|++|+|+.+.. ++..++...+... .++++.
T Consensus 333 G~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~ 368 (396)
T 3c0k_A 333 GILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIE 368 (396)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred cEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 9999999998776 5677777655544 455553
No 17
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.65 E-value=8.8e-16 Score=151.74 Aligned_cols=142 Identities=11% Similarity=0.090 Sum_probs=109.2
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.++.+|||+|||+|..+..++..++ ...|+|+|+|+.+++.+++|+.++|+.++.++++|..... ..+.||+|++|
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~---~~~~fD~Iv~n 183 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL---AGQQFAMIVSN 183 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG---TTCCEEEEEEC
T ss_pred cCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhc---ccCCccEEEEC
Confidence 5688999999999999999998875 4799999999999999999999999989999999987642 23689999999
Q ss_pred CCCCCCC-------cccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHH
Q 011002 257 APCSGTG-------VISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALK 329 (496)
Q Consensus 257 pPCSg~G-------vi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~ 329 (496)
|||.+.+ ++...|...+.-.... ......++..+.++| +|||++++..+. .+.+.+..+++
T Consensus 184 pPy~~~~~~~l~~~v~~~~p~~al~~~~~g----~~~~~~~l~~~~~~L----kpgG~l~~~~~~----~~~~~~~~~l~ 251 (276)
T 2b3t_A 184 PPYIDEQDPHLQQGDVRFEPLTALVAADSG----MADIVHIIEQSRNAL----VSGGFLLLEHGW----QQGEAVRQAFI 251 (276)
T ss_dssp CCCBCTTCHHHHSSGGGSSCSTTTBCHHHH----THHHHHHHHHHGGGE----EEEEEEEEECCS----SCHHHHHHHHH
T ss_pred CCCCCccccccChhhhhcCcHHHHcCCCcH----HHHHHHHHHHHHHhc----CCCCEEEEEECc----hHHHHHHHHHH
Confidence 9998874 4444555444322222 234466888888887 999999997543 34556666676
Q ss_pred hCCcE
Q 011002 330 KRDVK 334 (496)
Q Consensus 330 ~~~~~ 334 (496)
+.++.
T Consensus 252 ~~Gf~ 256 (276)
T 2b3t_A 252 LAGYH 256 (276)
T ss_dssp HTTCT
T ss_pred HCCCc
Confidence 65443
No 18
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.65 E-value=6.4e-16 Score=147.52 Aligned_cols=169 Identities=14% Similarity=0.148 Sum_probs=118.3
Q ss_pred EecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCC
Q 011002 162 LQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNE 240 (496)
Q Consensus 162 iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~ 240 (496)
++.....++..++...++.+|||+|||+|..+++++..+++.+.|+++|+++.+++.+++|+.++|+.+ |.++.+|+..
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (221)
T 3u81_A 42 VGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQD 121 (221)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHH
Confidence 334444555555555678999999999999999999987766899999999999999999999999974 9999999865
Q ss_pred CccccC----CCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 241 LPKVLG----LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 241 l~~~~~----~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
+...+. .+.||+|++|+++... ....+++..+ ++ |+|||+||+.+|.+.
T Consensus 122 ~l~~~~~~~~~~~fD~V~~d~~~~~~----------------------~~~~~~~~~~-~~----LkpgG~lv~~~~~~~ 174 (221)
T 3u81_A 122 LIPQLKKKYDVDTLDMVFLDHWKDRY----------------------LPDTLLLEKC-GL----LRKGTVLLADNVIVP 174 (221)
T ss_dssp HGGGTTTTSCCCCCSEEEECSCGGGH----------------------HHHHHHHHHT-TC----CCTTCEEEESCCCCC
T ss_pred HHHHHHHhcCCCceEEEEEcCCcccc----------------------hHHHHHHHhc-cc----cCCCeEEEEeCCCCc
Confidence 422221 1589999999763210 1112334444 55 499999999998853
Q ss_pred CcCCHHHHHHHHHhCCcEEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceeEEEEEec
Q 011002 317 VTENEAVIDYALKKRDVKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKM 383 (496)
Q Consensus 317 ~eENE~vV~~~L~~~~~~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~ 383 (496)
......+++.....++...+ -..+|.....|||++++++..
T Consensus 175 --~~~~~~~~l~~~~~~~~~~~------------------------~~~~~~~~~~dG~~~~~~~g~ 215 (221)
T 3u81_A 175 --GTPDFLAYVRGSSSFECTHY------------------------SSYLEYMKVVDGLEKAIYQGP 215 (221)
T ss_dssp --CCHHHHHHHHHCTTEEEEEE------------------------EEEETTTTEEEEEEEEEECCC
T ss_pred --chHHHHHHHhhCCCceEEEc------------------------ccccccCCCCCceEEEEEeCC
Confidence 34555555443333332211 113455567899999998754
No 19
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.65 E-value=1.7e-15 Score=144.37 Aligned_cols=167 Identities=16% Similarity=0.150 Sum_probs=116.9
Q ss_pred CCCHHHHHHHHHHcCCccCCC----------CcCCcccEEEecCCCCCCCCcccccceEEEecCcc-hhHHHhcC--CCC
Q 011002 112 KTRRRDLADVLINRGVNLDPL----------SKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASS-FLPVMALA--PQE 178 (496)
Q Consensus 112 k~~~~~l~~~L~~~G~~~~p~----------~~~~~~gl~~~~~~~~i~~~~~~~~G~~~iQd~sS-~l~v~~L~--~~~ 178 (496)
.++++++.+.|...|+..++. ..|.+.+ .....+.+..+...++++.. .....++. +.+
T Consensus 6 ~~~~~~l~~~l~~~g~~~~~~~~~a~~~~~r~~f~~~~--------~y~~~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~ 77 (226)
T 1i1n_A 6 GASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--------PYMDSPQSIGFQATISAPHMHAYALELLFDQLHE 77 (226)
T ss_dssp CSSHHHHHHHHHHTTSCCSHHHHHHHHTSCGGGTCSSC--------TTSSSCEEEETTEEECCHHHHHHHHHHTTTTSCT
T ss_pred CchHHHHHHHHHHcCCcCCHHHHHHHHhCCHHHcCCCc--------cCCCCccccCCCceecCHHHHHHHHHHHHhhCCC
Confidence 356889999999999853221 0121111 11222222222334444431 12233443 778
Q ss_pred CCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcC-----CceEEEEecCCCCCccccCCCCCCEE
Q 011002 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG-----VTNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g-----~~nv~v~~~D~~~l~~~~~~~~FD~V 253 (496)
+.+|||+|||+|..+.+++..+++.+.|+++|+++.+++.+++++..+| ..++.++.+|+...+.. .+.||+|
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~fD~i 155 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE--EAPYDAI 155 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG--GCCEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc--CCCcCEE
Confidence 9999999999999999999998666799999999999999999999976 46799999998754322 2679999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCC
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTEN 320 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eEN 320 (496)
++++||.. ++..+.++| +|||+|++++|+...+++
T Consensus 156 ~~~~~~~~----------------------------~~~~~~~~L----kpgG~lv~~~~~~~~~~~ 190 (226)
T 1i1n_A 156 HVGAAAPV----------------------------VPQALIDQL----KPGGRLILPVGPAGGNQM 190 (226)
T ss_dssp EECSBBSS----------------------------CCHHHHHTE----EEEEEEEEEESCTTSCEE
T ss_pred EECCchHH----------------------------HHHHHHHhc----CCCcEEEEEEecCCCceE
Confidence 99998721 134556666 999999999998765444
No 20
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.64 E-value=6.1e-17 Score=168.48 Aligned_cols=172 Identities=15% Similarity=0.056 Sum_probs=116.8
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc---------------CCceEEEEecCCCCCc
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM---------------GVTNTIVCNYDGNELP 242 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~---------------g~~nv~v~~~D~~~l~ 242 (496)
+|.+|||+|||+|..++.+|..++. ..|+++|+++.+++.+++|++++ |+.++.++++|+..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~-~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPA-EEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSC-SEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 6899999999999999999998754 57999999999999999999999 8888999999997764
Q ss_pred cccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHH
Q 011002 243 KVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEA 322 (496)
Q Consensus 243 ~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~ 322 (496)
... ...||+|++||||+. ..+|..|++.| ++|| ++|.||+-....+..
T Consensus 126 ~~~-~~~fD~I~lDP~~~~--------------------------~~~l~~a~~~l----k~gG-~l~vt~td~~~l~~~ 173 (378)
T 2dul_A 126 AER-HRYFHFIDLDPFGSP--------------------------MEFLDTALRSA----KRRG-ILGVTATDGAPLCGA 173 (378)
T ss_dssp HHS-TTCEEEEEECCSSCC--------------------------HHHHHHHHHHE----EEEE-EEEEEECCHHHHTTS
T ss_pred Hhc-cCCCCEEEeCCCCCH--------------------------HHHHHHHHHhc----CCCC-EEEEEeecchhhccc
Confidence 322 257999999999763 24688888887 9999 788899755432222
Q ss_pred HHHHHHHhCCcEEeecCCcCCCCCcccc-cccccCCCcCCeeEecCCCCCCCceeEEEEEecC
Q 011002 323 VIDYALKKRDVKLVPCGLDFGRQGFVRF-REHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMS 384 (496)
Q Consensus 323 vV~~~L~~~~~~lv~~~~~~~~~g~~~~-~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~~ 384 (496)
.....+.+++......... ...+.... .... .......+.+.|.....+|||++++.|.-
T Consensus 174 ~~~~~~~~yg~~p~~~~~~-~e~~~ri~l~~~~-~~~~~~g~~i~P~~~~~~~~y~rv~vrv~ 234 (378)
T 2dul_A 174 HPRACLRKYLAVPLRGELC-HEVGTRILVGVIA-RYAAKYDLGIDVILAYYKDHYFRAFVKLK 234 (378)
T ss_dssp SHHHHHHHHSSBCCCSTTH-HHHHHHHHHHHHH-HHHHTTTEEEEEEEEEEETTEEEEEEEEE
T ss_pred cHHHHHHHccCCCcccccc-cchhHHHHHHHHH-HhcCcCCcEEEEEEEEecCCEEEEEEEEe
Confidence 3344455544322211000 00000000 0000 00001235677766667899999998764
No 21
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.64 E-value=3.1e-16 Score=153.04 Aligned_cols=121 Identities=14% Similarity=0.174 Sum_probs=96.2
Q ss_pred chhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCC-ccc
Q 011002 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNEL-PKV 244 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l-~~~ 244 (496)
..++..++...++.+|||+|||+|..+.+++..+++.+.|+++|+++.+++.+++++.+.|+. +|.++.+|+..+ +..
T Consensus 52 ~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~ 131 (248)
T 3tfw_A 52 GQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESL 131 (248)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTC
T ss_pred HHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhc
Confidence 344444445567899999999999999999998876689999999999999999999999997 699999998763 322
Q ss_pred cCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 245 LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 245 ~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
...+.||+|++|+++.. ...++..+.++| +|||+|++.++.+.
T Consensus 132 ~~~~~fD~V~~d~~~~~-------------------------~~~~l~~~~~~L----kpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 132 GECPAFDLIFIDADKPN-------------------------NPHYLRWALRYS----RPGTLIIGDNVVRD 174 (248)
T ss_dssp CSCCCCSEEEECSCGGG-------------------------HHHHHHHHHHTC----CTTCEEEEECCSGG
T ss_pred CCCCCeEEEEECCchHH-------------------------HHHHHHHHHHhc----CCCeEEEEeCCCcC
Confidence 21248999999986321 123577777776 99999999988765
No 22
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.60 E-value=1.5e-15 Score=144.39 Aligned_cols=121 Identities=12% Similarity=0.144 Sum_probs=95.0
Q ss_pred chhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCcccc
Q 011002 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVL 245 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~ 245 (496)
..+...++...++.+|||+|||+|..+.+++..+++.+.|+++|+++.+++.+++++.+.|+.+ +.++.+|+......+
T Consensus 47 ~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 126 (223)
T 3duw_A 47 GKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQI 126 (223)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH
Confidence 3344444455678999999999999999999988756899999999999999999999999976 999999986542211
Q ss_pred C---CCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 246 G---LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 246 ~---~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
. .+.||+|++|+++.. ...++..+.++| +|||+|++.++.+.
T Consensus 127 ~~~~~~~fD~v~~d~~~~~-------------------------~~~~l~~~~~~L----~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 127 ENEKYEPFDFIFIDADKQN-------------------------NPAYFEWALKLS----RPGTVIIGDNVVRE 171 (223)
T ss_dssp HHTTCCCCSEEEECSCGGG-------------------------HHHHHHHHHHTC----CTTCEEEEESCSGG
T ss_pred HhcCCCCcCEEEEcCCcHH-------------------------HHHHHHHHHHhc----CCCcEEEEeCCCcC
Confidence 1 156999999987421 124577777776 99999998877654
No 23
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.60 E-value=5.2e-15 Score=147.10 Aligned_cols=126 Identities=25% Similarity=0.282 Sum_probs=104.1
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
+++|.+|||+|||+|+.++.+|.... ..|+|+|+|+.+++.+++|+..+|+.+ +.++++|+..++. .+.||+|+
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~---~~~fD~Vi 197 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG---ENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC---CSCEEEEE
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc---cCCccEEE
Confidence 46799999999999999999998743 279999999999999999999999987 9999999998764 37899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC---CCcCCHHHHHHHHHhC
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI---MVTENEAVIDYALKKR 331 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl---~~eENE~vV~~~L~~~ 331 (496)
+|||++. ..++..+.++| +|||+|++++|+- ...+..+.+..++...
T Consensus 198 ~~~p~~~--------------------------~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 247 (278)
T 2frn_A 198 MGYVVRT--------------------------HEFIPKALSIA----KDGAIIHYHNTVPEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp ECCCSSG--------------------------GGGHHHHHHHE----EEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHT
T ss_pred ECCchhH--------------------------HHHHHHHHHHC----CCCeEEEEEEeeccccccccHHHHHHHHHHHc
Confidence 9999542 23467788887 9999999999984 3455666677777777
Q ss_pred CcEEe
Q 011002 332 DVKLV 336 (496)
Q Consensus 332 ~~~lv 336 (496)
++.+.
T Consensus 248 G~~~~ 252 (278)
T 2frn_A 248 GYDVE 252 (278)
T ss_dssp TCEEE
T ss_pred CCeeE
Confidence 76554
No 24
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.60 E-value=5.1e-16 Score=161.68 Aligned_cols=165 Identities=14% Similarity=0.119 Sum_probs=119.4
Q ss_pred CcccccceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc--
Q 011002 152 TPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-- 229 (496)
Q Consensus 152 ~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-- 229 (496)
...+++|.|.-|.....+...++ .+|.+|||+|||+|+.++++|.. +...|+++|+|+.+++.+++|+..+|+.
T Consensus 188 ~~~~~t~ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al~~A~~N~~~n~~~~~ 263 (385)
T 2b78_A 188 NDGLMTGIFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSRALSLAHFEANHLDMA 263 (385)
T ss_dssp SSSSCCSSCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHHHHHHHHHHHTTCCCT
T ss_pred cccccCCcCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCcc
Confidence 44566788866655555555444 57899999999999999999874 2358999999999999999999999997
Q ss_pred eEEEEecCCCCCcccc--CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcE
Q 011002 230 NTIVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGY 307 (496)
Q Consensus 230 nv~v~~~D~~~l~~~~--~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~ 307 (496)
++.++++|+..+.... ....||+|++|||+.+.+- ..+......+.+++..+.++| +|||+
T Consensus 264 ~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~-------------~~~~~~~~~~~~ll~~~~~~L----~pgG~ 326 (385)
T 2b78_A 264 NHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNK-------------KEVFSVSKDYHKLIRQGLEIL----SENGL 326 (385)
T ss_dssp TEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC------------------CCCCHHHHHHHHHHHHHHTE----EEEEE
T ss_pred ceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCCh-------------hhHHHHHHHHHHHHHHHHHhc----CCCcE
Confidence 8999999987642211 1258999999999865321 001112344567888888887 99999
Q ss_pred EEEEeCCCCCc--CCHHHHHHHHHhCCcEEee
Q 011002 308 IVYSTCSIMVT--ENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 308 LVYSTCSl~~e--ENE~vV~~~L~~~~~~lv~ 337 (496)
|++++|+-... +...++..++...+.+++.
T Consensus 327 l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~ 358 (385)
T 2b78_A 327 IIASTNAANMTVSQFKKQIEKGFGKQKHTYLD 358 (385)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHTTCCCEEEE
T ss_pred EEEEeCCCcCCHHHHHHHHHHHHHHcCCcEEE
Confidence 99999997653 3445566666555655443
No 25
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.59 E-value=1.1e-14 Score=149.34 Aligned_cols=139 Identities=21% Similarity=0.257 Sum_probs=110.8
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCC
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~F 250 (496)
+.++.+.++.+|||+|||+|..++.++...++...|+|+|+++.+++.+++|+...|+.++.+.++|+.+++... ..|
T Consensus 196 ~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~--~~~ 273 (354)
T 3tma_A 196 LRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFF--PEV 273 (354)
T ss_dssp HHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTC--CCC
T ss_pred HHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcccc--CCC
Confidence 344567889999999999999999999987445789999999999999999999999989999999999876543 569
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHh
Q 011002 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKK 330 (496)
Q Consensus 251 D~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~ 330 (496)
|+|++||||.-. ..+...+..++..++..+.++| +|||+++++|| |+..+..+++
T Consensus 274 D~Ii~npPyg~r--------------~~~~~~~~~~~~~~~~~~~~~L----kpgG~l~i~t~------~~~~~~~~~~- 328 (354)
T 3tma_A 274 DRILANPPHGLR--------------LGRKEGLFHLYWDFLRGALALL----PPGGRVALLTL------RPALLKRALP- 328 (354)
T ss_dssp SEEEECCCSCC------------------CHHHHHHHHHHHHHHHHTS----CTTCEEEEEES------CHHHHHHHCC-
T ss_pred CEEEECCCCcCc--------------cCCcccHHHHHHHHHHHHHHhc----CCCcEEEEEeC------CHHHHHHHhh-
Confidence 999999998321 0111334566778888888886 99999999998 4666777665
Q ss_pred CCcEEe
Q 011002 331 RDVKLV 336 (496)
Q Consensus 331 ~~~~lv 336 (496)
.+++..
T Consensus 329 ~g~~~~ 334 (354)
T 3tma_A 329 PGFALR 334 (354)
T ss_dssp TTEEEE
T ss_pred cCcEEE
Confidence 555543
No 26
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.58 E-value=6.3e-16 Score=158.09 Aligned_cols=157 Identities=14% Similarity=0.053 Sum_probs=113.3
Q ss_pred CcccccceEEEecCcchhHHHhcC-CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce
Q 011002 152 TPEYMAGFYMLQSASSFLPVMALA-PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN 230 (496)
Q Consensus 152 ~~~~~~G~~~iQd~sS~l~v~~L~-~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n 230 (496)
+..+..|+|..|.....++...+. ..++.+|||+|||+|+.++.++.. + ..|+++|+|+.+++.+++|+..+|+.+
T Consensus 126 ~~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~--g-a~V~~VD~s~~al~~a~~n~~~~gl~~ 202 (332)
T 2igt_A 126 TAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA--G-AEVTHVDASKKAIGWAKENQVLAGLEQ 202 (332)
T ss_dssp CSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT--T-CEEEEECSCHHHHHHHHHHHHHHTCTT
T ss_pred CccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc--C-CEEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 445667888777766555555553 456889999999999999999874 2 389999999999999999999999975
Q ss_pred --EEEEecCCCCCcccc--CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc
Q 011002 231 --TIVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG 306 (496)
Q Consensus 231 --v~v~~~D~~~l~~~~--~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG 306 (496)
+.++++|+..+.... ....||+|++||||.+.+-. ..+ + .....+..++..+.++| +|||
T Consensus 203 ~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~---~~~-~--------~~~~~~~~ll~~~~~~L----kpgG 266 (332)
T 2igt_A 203 APIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTH---GEV-W--------QLFDHLPLMLDICREIL----SPKA 266 (332)
T ss_dssp SCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTT---CCE-E--------EHHHHHHHHHHHHHHTB----CTTC
T ss_pred cceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCch---HHH-H--------HHHHHHHHHHHHHHHhc----CcCc
Confidence 999999987754211 12689999999999765411 000 0 12234467888888887 9999
Q ss_pred E-EEEEeCCCCCcCCHHHHHHHHH
Q 011002 307 Y-IVYSTCSIMVTENEAVIDYALK 329 (496)
Q Consensus 307 ~-LVYSTCSl~~eENE~vV~~~L~ 329 (496)
+ ++.++|+.. .+...+..++.
T Consensus 267 ~lli~~~~~~~--~~~~~~~~~l~ 288 (332)
T 2igt_A 267 LGLVLTAYSIR--ASFYSMHELMR 288 (332)
T ss_dssp CEEEEEECCTT--SCHHHHHHHHH
T ss_pred EEEEEECCCCC--CCHHHHHHHHH
Confidence 9 555667654 34444454444
No 27
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.57 E-value=7.3e-16 Score=154.10 Aligned_cols=222 Identities=16% Similarity=0.160 Sum_probs=132.8
Q ss_pred HHHHHHHHhC--CHHHHHHHHHHcCCCCCeEEEEcC---CCCCHHHHHHHHHHc--CCccCCCCcC-CcccEEEecCCCC
Q 011002 77 FLIGALVEMF--PPVELMELIESFEKPRPICLRTNT---LKTRRRDLADVLINR--GVNLDPLSKW-SKVGLVVYDSQVP 148 (496)
Q Consensus 77 wl~~~l~~~~--~~~e~~~~lea~~~~~p~~iRvNt---lk~~~~~l~~~L~~~--G~~~~p~~~~-~~~gl~~~~~~~~ 148 (496)
|....|...+ +..++..++.......+.++++|. ...+.+.+.+.+..+ |..+..+..+ .-.|+.+.
T Consensus 22 ~~~~~l~~~~~~~~~~a~~ll~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~p~~yi~g~~~f~~~~~~----- 96 (284)
T 1nv8_A 22 DCSGKLEGVTETSVLEVLLIVSRVLGIRKEDLFLKDLGVSPTEEKRILELVEKRASGYPLHYILGEKEFMGLSFL----- 96 (284)
T ss_dssp HHHHHTTTTCSCHHHHHHHHHHHHHTCCGGGGCCSSCCCCHHHHHHHHHHHHHHHTTCCHHHHHTEEEETTEEEE-----
T ss_pred HHHHHHHhccCChHHHHHHHHHHHcCCCHHHHHhccccccccCHHHHHHHHHHHHCCCCCeEEeeeeEECCeEEE-----
Confidence 4444444333 445677777777666777777765 222224444444433 3322111000 00111111
Q ss_pred CCCCcccccceEEEecCcchhHHHhc---CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH
Q 011002 149 IGATPEYMAGFYMLQSASSFLPVMAL---APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHR 225 (496)
Q Consensus 149 i~~~~~~~~G~~~iQd~sS~l~v~~L---~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r 225 (496)
...|.|+.......++..++ ...++.+|||+|||+|..++.++.. +...|+|+|+|+.+++.+++|+.+
T Consensus 97 ------v~~~~lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~ 168 (284)
T 1nv8_A 97 ------VEEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAER 168 (284)
T ss_dssp ------CCTTSCCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHH
T ss_pred ------eCCCceecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHH
Confidence 01123333333333332222 2346789999999999999999988 457999999999999999999999
Q ss_pred cCCce-EEEEecCCCCCccccCCCCC---CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHH-Hhhhh
Q 011002 226 MGVTN-TIVCNYDGNELPKVLGLNTV---DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAI-DMVDA 300 (496)
Q Consensus 226 ~g~~n-v~v~~~D~~~l~~~~~~~~F---D~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~-~~L~~ 300 (496)
+|+.+ +.++++|...... +.| |+|++||||.+.+. ...+++. ......+. .......++..++ +.+
T Consensus 169 ~~l~~~v~~~~~D~~~~~~----~~f~~~D~IvsnPPyi~~~~-~l~~~v~-~ep~~al~-~~~dgl~~~~~i~~~~l-- 239 (284)
T 1nv8_A 169 HGVSDRFFVRKGEFLEPFK----EKFASIEMILSNPPYVKSSA-HLPKDVL-FEPPEALF-GGEDGLDFYREFFGRYD-- 239 (284)
T ss_dssp TTCTTSEEEEESSTTGGGG----GGTTTCCEEEECCCCBCGGG-SCTTSCC-CSCHHHHB-CTTTSCHHHHHHHHHCC--
T ss_pred cCCCCceEEEECcchhhcc----cccCCCCEEEEcCCCCCccc-ccChhhc-cCcHHHhc-CCCcHHHHHHHHHHhcC--
Confidence 99986 9999999976421 468 99999999998876 4445554 11111110 0001124567777 766
Q ss_pred cCCCCcEEEEEeCCCCCcCCHHHHH
Q 011002 301 NSKSGGYIVYSTCSIMVTENEAVID 325 (496)
Q Consensus 301 ~lkpGG~LVYSTCSl~~eENE~vV~ 325 (496)
+|||+|++. +...+.+++..
T Consensus 240 --~pgG~l~~e---~~~~q~~~v~~ 259 (284)
T 1nv8_A 240 --TSGKIVLME---IGEDQVEELKK 259 (284)
T ss_dssp --CTTCEEEEE---CCTTCHHHHTT
T ss_pred --CCCCEEEEE---ECchHHHHHHH
Confidence 999999963 33445454433
No 28
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.56 E-value=4.2e-14 Score=132.77 Aligned_cols=140 Identities=19% Similarity=0.192 Sum_probs=110.3
Q ss_pred ceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecC
Q 011002 158 GFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD 237 (496)
Q Consensus 158 G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D 237 (496)
|.+ .+.....+....+.+.++.+|||+|||+|..+..++...+ .+.|+|+|+++.+++.+++++..+|+.++.++.+|
T Consensus 21 g~~-~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d 98 (204)
T 3e05_A 21 KLI-TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAF 98 (204)
T ss_dssp TTS-CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECC
T ss_pred CcC-ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 444 3333334556677888999999999999999999998854 47999999999999999999999999889999999
Q ss_pred CCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 011002 238 GNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 238 ~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~ 317 (496)
+....... ..||+|+++.+.. ....++..+.++| +|||+|++++++.
T Consensus 99 ~~~~~~~~--~~~D~i~~~~~~~-------------------------~~~~~l~~~~~~L----kpgG~l~~~~~~~-- 145 (204)
T 3e05_A 99 APEGLDDL--PDPDRVFIGGSGG-------------------------MLEEIIDAVDRRL----KSEGVIVLNAVTL-- 145 (204)
T ss_dssp TTTTCTTS--CCCSEEEESCCTT-------------------------CHHHHHHHHHHHC----CTTCEEEEEECBH--
T ss_pred hhhhhhcC--CCCCEEEECCCCc-------------------------CHHHHHHHHHHhc----CCCeEEEEEeccc--
Confidence 96654322 6799999987631 1135678888876 9999999988775
Q ss_pred cCCHHHHHHHHHhCCc
Q 011002 318 TENEAVIDYALKKRDV 333 (496)
Q Consensus 318 eENE~vV~~~L~~~~~ 333 (496)
++...+..++.+.++
T Consensus 146 -~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 146 -DTLTKAVEFLEDHGY 160 (204)
T ss_dssp -HHHHHHHHHHHHTTC
T ss_pred -ccHHHHHHHHHHCCC
Confidence 456666677777775
No 29
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.56 E-value=3.1e-16 Score=163.86 Aligned_cols=175 Identities=12% Similarity=0.071 Sum_probs=116.7
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce--EEEEecCCCCCcc-ccCCCCCCEE
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN--TIVCNYDGNELPK-VLGLNTVDRV 253 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n--v~v~~~D~~~l~~-~~~~~~FD~V 253 (496)
++|.+|||+|||+|++++.+|..+++.+.|+++|+++.+++.+++|++.+|+.+ +.++++|+..+.. .. ...||+|
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~-~~~fD~V 129 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW-GFGFDYV 129 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC-SSCEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh-CCCCcEE
Confidence 578999999999999999999987655789999999999999999999999987 9999999876543 22 2579999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCc
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDV 333 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~ 333 (496)
++||||+. ..++..|+++| ++|| ++|+||+-...-....+...+++++.
T Consensus 130 ~lDP~g~~--------------------------~~~l~~a~~~L----k~gG-ll~~t~t~~~~l~g~~~~~~~rkYg~ 178 (392)
T 3axs_A 130 DLDPFGTP--------------------------VPFIESVALSM----KRGG-ILSLTATDTAPLSGTYPKTCMRRYMA 178 (392)
T ss_dssp EECCSSCC--------------------------HHHHHHHHHHE----EEEE-EEEEEECCHHHHTTSSHHHHHHHHSS
T ss_pred EECCCcCH--------------------------HHHHHHHHHHh----CCCC-EEEEEecchhhhccccHHHHHHHhCC
Confidence 99997431 23678888887 9999 78999976543222233445555554
Q ss_pred EEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceeEEEEEecC
Q 011002 334 KLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMS 384 (496)
Q Consensus 334 ~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~~ 384 (496)
....+..... .+...+-..-.-......+.+.|...-..+||+-+|.|..
T Consensus 179 ~p~r~~~~~e-~~~r~~L~~~~~~a~~~~~~i~P~l~~~~~~y~Rv~vrv~ 228 (392)
T 3axs_A 179 RPLRNEFKHE-VGIRILIKKVIELAAQYDIAMIPIFAYSHLHYFKLFFVKE 228 (392)
T ss_dssp BCCCSTTHHH-HHHHHHHHHHHHHHHTTTEEEEEEEEEEETTEEEEEEEEE
T ss_pred cccccccccc-hhHHHHHHHHHHhcccCCCeEEeeEEEEeCcEEEEEEEEe
Confidence 4332211000 0000000000000001235667766666788888777653
No 30
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.56 E-value=2.9e-15 Score=143.77 Aligned_cols=129 Identities=16% Similarity=0.161 Sum_probs=102.7
Q ss_pred ceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEec
Q 011002 158 GFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNY 236 (496)
Q Consensus 158 G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~ 236 (496)
|..++|...+.++..++.+.++.+|||+|||+|..+..++..++ .+.|+++|+++.+++.+++++..+|+. ++.++.+
T Consensus 34 ~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 112 (233)
T 2gpy_A 34 QVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFG 112 (233)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred CCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC
Confidence 44456666666777777777899999999999999999999875 479999999999999999999999985 5999999
Q ss_pred CCCCC-ccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 237 DGNEL-PKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 237 D~~~l-~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
|+... +.....+.||+|++|+||. .+..++..+.++| +|||+|+++++.+
T Consensus 113 d~~~~~~~~~~~~~fD~I~~~~~~~-------------------------~~~~~l~~~~~~L----~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 113 DALQLGEKLELYPLFDVLFIDAAKG-------------------------QYRRFFDMYSPMV----RPGGLILSDNVLF 163 (233)
T ss_dssp CGGGSHHHHTTSCCEEEEEEEGGGS-------------------------CHHHHHHHHGGGE----EEEEEEEEETTTC
T ss_pred CHHHHHHhcccCCCccEEEECCCHH-------------------------HHHHHHHHHHHHc----CCCeEEEEEcCCc
Confidence 98775 3221136899999998853 1234677777776 9999999997654
Q ss_pred C
Q 011002 316 M 316 (496)
Q Consensus 316 ~ 316 (496)
.
T Consensus 164 ~ 164 (233)
T 2gpy_A 164 R 164 (233)
T ss_dssp -
T ss_pred C
Confidence 3
No 31
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.56 E-value=2.2e-14 Score=139.85 Aligned_cols=118 Identities=19% Similarity=0.240 Sum_probs=93.9
Q ss_pred CcchhHHHh------cCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC
Q 011002 165 ASSFLPVMA------LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG 238 (496)
Q Consensus 165 ~sS~l~v~~------L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~ 238 (496)
--|.|++.+ |.++||++|||+|||+|..+.++|...+++|.|+|+|+++.+++.+++++.+. .|+..+..|.
T Consensus 58 ~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~ 135 (233)
T 4df3_A 58 YRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDA 135 (233)
T ss_dssp TTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCT
T ss_pred CchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEec
Confidence 346666555 35899999999999999999999999999999999999999999999988765 4788888888
Q ss_pred CCCccc-cCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 239 NELPKV-LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 239 ~~l~~~-~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
...... +..+.||+|++|.+... ....++.++.++| ||||+++.+.
T Consensus 136 ~~p~~~~~~~~~vDvVf~d~~~~~------------------------~~~~~l~~~~r~L----KpGG~lvI~i 182 (233)
T 4df3_A 136 RFPEKYRHLVEGVDGLYADVAQPE------------------------QAAIVVRNARFFL----RDGGYMLMAI 182 (233)
T ss_dssp TCGGGGTTTCCCEEEEEECCCCTT------------------------HHHHHHHHHHHHE----EEEEEEEEEE
T ss_pred cCccccccccceEEEEEEeccCCh------------------------hHHHHHHHHHHhc----cCCCEEEEEE
Confidence 764321 22368999999987431 1134577888887 9999999874
No 32
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.56 E-value=2.1e-14 Score=136.20 Aligned_cols=132 Identities=19% Similarity=0.234 Sum_probs=106.8
Q ss_pred hhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccC
Q 011002 168 FLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLG 246 (496)
Q Consensus 168 ~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~ 246 (496)
.++...+.+.++.+|||+|||+|..+..++.. .+.|+|+|+++.+++.+++++.++|+. ++.++.+|+.......
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~- 120 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL- 120 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-
T ss_pred HHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-
Confidence 34556678889999999999999999999987 479999999999999999999999998 8999999998743222
Q ss_pred CCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHH
Q 011002 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (496)
Q Consensus 247 ~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~ 326 (496)
..||+|++++.. . +. ++..+.++| +|||+|++++|+. ++...+..
T Consensus 121 -~~~D~v~~~~~~----------------~----------~~-~l~~~~~~L----kpgG~lv~~~~~~---~~~~~~~~ 165 (204)
T 3njr_A 121 -PLPEAVFIGGGG----------------S----------QA-LYDRLWEWL----APGTRIVANAVTL---ESETLLTQ 165 (204)
T ss_dssp -CCCSEEEECSCC----------------C----------HH-HHHHHHHHS----CTTCEEEEEECSH---HHHHHHHH
T ss_pred -CCCCEEEECCcc----------------c----------HH-HHHHHHHhc----CCCcEEEEEecCc---ccHHHHHH
Confidence 579999987621 0 12 577777876 9999999999875 56666777
Q ss_pred HHHhCCcEEeec
Q 011002 327 ALKKRDVKLVPC 338 (496)
Q Consensus 327 ~L~~~~~~lv~~ 338 (496)
++++.++++..+
T Consensus 166 ~l~~~g~~i~~i 177 (204)
T 3njr_A 166 LHARHGGQLLRI 177 (204)
T ss_dssp HHHHHCSEEEEE
T ss_pred HHHhCCCcEEEE
Confidence 777777776655
No 33
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.55 E-value=1.3e-14 Score=150.14 Aligned_cols=102 Identities=17% Similarity=0.263 Sum_probs=84.1
Q ss_pred CCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCC-----------
Q 011002 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGL----------- 247 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~----------- 247 (496)
+.+|||+|||+|.+++.+|.. .+.|+|+|+++.+++.+++|+..+|+.|+.++.+|+.++...+..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~ 290 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGID 290 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSC
T ss_pred CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccc
Confidence 688999999999999988863 368999999999999999999999999999999998765321111
Q ss_pred ---CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 248 ---NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 248 ---~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
..||+|++|||+.|. ...+++.| +++|.|||++|+.
T Consensus 291 ~~~~~fD~Vv~dPPr~g~----------------------------~~~~~~~l----~~~g~ivyvsc~p 329 (369)
T 3bt7_A 291 LKSYQCETIFVDPPRSGL----------------------------DSETEKMV----QAYPRILYISCNP 329 (369)
T ss_dssp GGGCCEEEEEECCCTTCC----------------------------CHHHHHHH----TTSSEEEEEESCH
T ss_pred cccCCCCEEEECcCcccc----------------------------HHHHHHHH----hCCCEEEEEECCH
Confidence 279999999998753 23345555 7999999999974
No 34
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.55 E-value=1.8e-14 Score=132.80 Aligned_cols=123 Identities=15% Similarity=0.203 Sum_probs=90.2
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
.+.+|.+|||+|||+|..+..++.. .+.|+|+|+|+.+++.+++++..+|+.++.+++.|...++... .+.||.|+
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~-~~~fD~v~ 94 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYV-REPIRAAI 94 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTC-CSCEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhc-cCCcCEEE
Confidence 3568999999999999999999886 4799999999999999999999999988999987776654333 47899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~e 318 (496)
+++++-..+ ...+......+..+|..+.++| +|||+|+.+.++-++.
T Consensus 95 ~~~~~~~~~-------------~~~~~~~~~~~~~~l~~~~~~L----kpgG~l~i~~~~~~~~ 141 (185)
T 3mti_A 95 FNLGYLPSA-------------DKSVITKPHTTLEAIEKILDRL----EVGGRLAIMIYYGHDG 141 (185)
T ss_dssp EEEC------------------------CHHHHHHHHHHHHHHE----EEEEEEEEEEC-----
T ss_pred EeCCCCCCc-------------chhcccChhhHHHHHHHHHHhc----CCCcEEEEEEeCCCCC
Confidence 986532111 1112223344556788888887 9999999988875543
No 35
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.55 E-value=2.7e-14 Score=142.75 Aligned_cols=125 Identities=25% Similarity=0.308 Sum_probs=100.2
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
.++|++|||||||+|++++.+|.. +...|+|+|+|+..++.+++|++.+|+.+ +.++++|++.++. .+.||+|+
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~---~~~~D~Vi 197 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG---ENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC---CSCEEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc---ccCCCEEE
Confidence 468999999999999999999876 23689999999999999999999999976 9999999998864 26899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe-C--CCCCcCCHHHHHHHHHhC
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST-C--SIMVTENEAVIDYALKKR 331 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST-C--Sl~~eENE~vV~~~L~~~ 331 (496)
+|+|++.. +.|..|+++| ++||.|.|.+ + .....+..+.+..+....
T Consensus 198 ~~~p~~~~--------------------------~~l~~a~~~l----k~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~ 247 (278)
T 3k6r_A 198 MGYVVRTH--------------------------EFIPKALSIA----KDGAIIHYHNTVPEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp ECCCSSGG--------------------------GGHHHHHHHE----EEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHT
T ss_pred ECCCCcHH--------------------------HHHHHHHHHc----CCCCEEEEEeeecccccchhHHHHHHHHHHHc
Confidence 99997542 2367788887 9999986542 2 233445567777777776
Q ss_pred CcEE
Q 011002 332 DVKL 335 (496)
Q Consensus 332 ~~~l 335 (496)
++++
T Consensus 248 g~~v 251 (278)
T 3k6r_A 248 GYDV 251 (278)
T ss_dssp TCEE
T ss_pred CCcE
Confidence 6544
No 36
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.55 E-value=1.5e-14 Score=137.94 Aligned_cols=150 Identities=13% Similarity=0.068 Sum_probs=103.2
Q ss_pred CCCCCCeEeecccC-CcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEE
Q 011002 175 APQEKERVIDMAAA-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDlcAG-pGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~V 253 (496)
.+.++.+|||+||| +|..+..++... .+.|+|+|+++.+++.+++|+..+|+ ++.++.+|+..+... ..+.||+|
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~-~~~~fD~I 127 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGV-VEGTFDVI 127 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTT-CCSCEEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhc-ccCceeEE
Confidence 35689999999999 999999999886 47899999999999999999999999 899999997654332 23789999
Q ss_pred EECCCCCCCCcccCC-chhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCC
Q 011002 254 LLDAPCSGTGVISKD-ESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRD 332 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~-p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~ 332 (496)
++|||+...+..... |...+......+ .....++..+.++| +|||+|++.+++- .+....+...+.+.+
T Consensus 128 ~~npp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~L----kpgG~l~~~~~~~--~~~~~~~~~~l~~~g 197 (230)
T 3evz_A 128 FSAPPYYDKPLGRVLTEREAIGGGKYGE----EFSVKLLEEAFDHL----NPGGKVALYLPDK--EKLLNVIKERGIKLG 197 (230)
T ss_dssp EECCCCC---------------CCSSSC----HHHHHHHHHHGGGE----EEEEEEEEEEESC--HHHHHHHHHHHHHTT
T ss_pred EECCCCcCCccccccChhhhhccCccch----HHHHHHHHHHHHHh----CCCeEEEEEeccc--HhHHHHHHHHHHHcC
Confidence 999998765532111 111110000010 11255778888876 9999999876542 234445556677777
Q ss_pred cEEeec
Q 011002 333 VKLVPC 338 (496)
Q Consensus 333 ~~lv~~ 338 (496)
+.+..+
T Consensus 198 ~~~~~~ 203 (230)
T 3evz_A 198 YSVKDI 203 (230)
T ss_dssp CEEEEE
T ss_pred CceEEE
Confidence 766544
No 37
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.55 E-value=5.5e-14 Score=138.28 Aligned_cols=138 Identities=17% Similarity=0.166 Sum_probs=97.9
Q ss_pred cchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH---cCCc-eEEEEecCCCCC
Q 011002 166 SSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHR---MGVT-NTIVCNYDGNEL 241 (496)
Q Consensus 166 sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r---~g~~-nv~v~~~D~~~l 241 (496)
.+.+++.++.+.++.+|||+|||+|..++.++...+ ...|+++|+++.+++.+++|+.. +|+. ++.++++|+..+
T Consensus 24 D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~ 102 (260)
T 2ozv_A 24 DAMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLR 102 (260)
T ss_dssp HHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCC
T ss_pred HHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHH
Confidence 366777777888899999999999999999999875 37999999999999999999999 8887 499999999887
Q ss_pred cc-----ccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 242 PK-----VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 242 ~~-----~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.. .+..+.||+|++|||+...+ -...|+....... .........++..+.++| +|||+|++..
T Consensus 103 ~~~~~~~~~~~~~fD~Vv~nPPy~~~~-~~~~~~~~~~~a~---~~~~~~~~~~l~~~~~~L----kpgG~l~~~~ 170 (260)
T 2ozv_A 103 AKARVEAGLPDEHFHHVIMNPPYNDAG-DRRTPDALKAEAH---AMTEGLFEDWIRTASAIM----VSGGQLSLIS 170 (260)
T ss_dssp HHHHHHTTCCTTCEEEEEECCCC-------------------------CCHHHHHHHHHHHE----EEEEEEEEEE
T ss_pred hhhhhhhccCCCCcCEEEECCCCcCCC-CCCCcCHHHHHHh---hcCcCCHHHHHHHHHHHc----CCCCEEEEEE
Confidence 21 13347899999999997663 1222222111110 001112356788888887 9999998854
No 38
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.55 E-value=1.1e-14 Score=144.05 Aligned_cols=205 Identities=14% Similarity=0.128 Sum_probs=123.4
Q ss_pred HHHHcCCCCCeEEEEcCCCCCHHHHH-HHHHHcCCccCCCCcCCcccEEEecCCCCCCCCcccccceEEEecCcchhHHH
Q 011002 94 LIESFEKPRPICLRTNTLKTRRRDLA-DVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVM 172 (496)
Q Consensus 94 ~lea~~~~~p~~iRvNtlk~~~~~l~-~~L~~~G~~~~p~~~~~~~gl~~~~~~~~i~~~~~~~~G~~~iQd~sS~l~v~ 172 (496)
++.+++...|++.|+|+.+.+.+.+. +.|...++.. .+ ......+..+. +.+......+..+...+++..+.+++.
T Consensus 28 i~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~g~~~g~-~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (275)
T 1yb2_A 28 ILVSEDEYGKFDESTNSILVKGKMHHLGISRVIEPGD-EL-IVSGKSFIVSD-FSPMYFGRVIRRNTQIISEIDASYIIM 104 (275)
T ss_dssp EEECSSCCEEEETTTTEEEC-CCEEECC-CCCCCTTC-EE-EETTEEEEEEC-CCGGGHHHHC-----------------
T ss_pred EEEecCCCCceeccccceeccCCccchhheeCCCCCc-EE-EECCeEEEEeC-CCHHHHHhhccccccccChhhHHHHHH
Confidence 34567788889999997665432211 1111111100 00 00001111111 111112233444566667766677778
Q ss_pred hcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc-CCceEEEEecCCCCCccccCCCCCC
Q 011002 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-GVTNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 173 ~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~-g~~nv~v~~~D~~~l~~~~~~~~FD 251 (496)
.+.+.++.+|||+|||+|..+.+++..+.+.+.|+++|+++.+++.+++++..+ |..++.+..+|+... +..+.||
T Consensus 105 ~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~---~~~~~fD 181 (275)
T 1yb2_A 105 RCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF---ISDQMYD 181 (275)
T ss_dssp -CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC---CCSCCEE
T ss_pred HcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc---CcCCCcc
Confidence 888999999999999999999999998655689999999999999999999999 988899999998763 2336899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhC
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKR 331 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~ 331 (496)
+|++|+|. | ..+|..+.++| +|||+|++++|+.. ....+...|...
T Consensus 182 ~Vi~~~~~---------~------------------~~~l~~~~~~L----kpgG~l~i~~~~~~---~~~~~~~~l~~~ 227 (275)
T 1yb2_A 182 AVIADIPD---------P------------------WNHVQKIASMM----KPGSVATFYLPNFD---QSEKTVLSLSAS 227 (275)
T ss_dssp EEEECCSC---------G------------------GGSHHHHHHTE----EEEEEEEEEESSHH---HHHHHHHHSGGG
T ss_pred EEEEcCcC---------H------------------HHHHHHHHHHc----CCCCEEEEEeCCHH---HHHHHHHHHHHC
Confidence 99998871 1 13577777876 99999999998762 222333445555
Q ss_pred CcEEeec
Q 011002 332 DVKLVPC 338 (496)
Q Consensus 332 ~~~lv~~ 338 (496)
++..+.+
T Consensus 228 Gf~~~~~ 234 (275)
T 1yb2_A 228 GMHHLET 234 (275)
T ss_dssp TEEEEEE
T ss_pred CCeEEEE
Confidence 6665543
No 39
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.53 E-value=7.1e-14 Score=144.60 Aligned_cols=153 Identities=12% Similarity=0.118 Sum_probs=114.3
Q ss_pred cccccceEEEecCcchhHHHhc-CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceE
Q 011002 153 PEYMAGFYMLQSASSFLPVMAL-APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNT 231 (496)
Q Consensus 153 ~~~~~G~~~iQd~sS~l~v~~L-~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv 231 (496)
..|..++...|+..+.++.... ...+|.+|||+| |+|..+..++... ..+.|+++|+++.+++.+++|+.++|+.+|
T Consensus 146 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~~-~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v 223 (373)
T 2qm3_A 146 HEFDQAYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLSG-LPKRIAVLDIDERLTKFIEKAANEIGYEDI 223 (373)
T ss_dssp GGGTCCCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHHHHTCCCE
T ss_pred hhcCCeecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCE
Confidence 3455556666665555543322 345789999999 9999999988763 347999999999999999999999999889
Q ss_pred EEEecCCCC-CccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc-EEE
Q 011002 232 IVCNYDGNE-LPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG-YIV 309 (496)
Q Consensus 232 ~v~~~D~~~-l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG-~LV 309 (496)
.++.+|+.. ++... .+.||+|++||||... . ...+|..+.++| +||| .++
T Consensus 224 ~~~~~D~~~~l~~~~-~~~fD~Vi~~~p~~~~----------------~-------~~~~l~~~~~~L----kpgG~~~~ 275 (373)
T 2qm3_A 224 EIFTFDLRKPLPDYA-LHKFDTFITDPPETLE----------------A-------IRAFVGRGIATL----KGPRCAGY 275 (373)
T ss_dssp EEECCCTTSCCCTTT-SSCBSEEEECCCSSHH----------------H-------HHHHHHHHHHTB----CSTTCEEE
T ss_pred EEEEChhhhhchhhc-cCCccEEEECCCCchH----------------H-------HHHHHHHHHHHc----ccCCeEEE
Confidence 999999988 55312 2589999999997531 0 156788888887 9999 558
Q ss_pred EEeCCCCCcCCH---HHHHHHHH-hCCcEEee
Q 011002 310 YSTCSIMVTENE---AVIDYALK-KRDVKLVP 337 (496)
Q Consensus 310 YSTCSl~~eENE---~vV~~~L~-~~~~~lv~ 337 (496)
|++|+ ..++. ..+..++. +.++.+..
T Consensus 276 ~~~~~--~~~~~~~~~~~~~~l~~~~g~~~~~ 305 (373)
T 2qm3_A 276 FGITR--RESSLDKWREIQKLLLNEFNVVITD 305 (373)
T ss_dssp EEECT--TTCCHHHHHHHHHHHHHTSCCEEEE
T ss_pred EEEec--CcCCHHHHHHHHHHHHHhcCcchhh
Confidence 88886 34555 56677776 66765543
No 40
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.53 E-value=5e-14 Score=131.13 Aligned_cols=126 Identities=17% Similarity=0.258 Sum_probs=98.1
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccccCCCCCCEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~~~~~FD~V 253 (496)
.++++.+|||+|||+|..+..++..+++.+.|+|+|+++.+++.+++++..+|+ .++.++++|+..++... .+.||+|
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~fD~v 97 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI-DCPVKAV 97 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC-CSCEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc-cCCceEE
Confidence 467899999999999999999999986667999999999999999999999998 67999999988776433 3789999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~e 318 (496)
++|+|+-..+. ........ ....++..+.++| +|||+|++++++-.+.
T Consensus 98 ~~~~~~~~~~~------~~~~~~~~-------~~~~~l~~~~~~L----k~gG~l~~~~~~~~~~ 145 (197)
T 3eey_A 98 MFNLGYLPSGD------HSISTRPE-------TTIQALSKAMELL----VTGGIITVVIYYGGDT 145 (197)
T ss_dssp EEEESBCTTSC------TTCBCCHH-------HHHHHHHHHHHHE----EEEEEEEEEECCBTTT
T ss_pred EEcCCcccCcc------cccccCcc-------cHHHHHHHHHHhC----cCCCEEEEEEccCCCC
Confidence 99997621110 00111111 2344788888887 9999999988665443
No 41
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.50 E-value=3.1e-14 Score=138.01 Aligned_cols=121 Identities=17% Similarity=0.126 Sum_probs=96.0
Q ss_pred chhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCcccc
Q 011002 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVL 245 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~ 245 (496)
..+...++...++.+|||+|||+|+.++.++..+++.+.|+++|+++.+++.+++++.+.|+.+ |.++.+|+.++...+
T Consensus 59 ~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l 138 (237)
T 3c3y_A 59 GQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNL 138 (237)
T ss_dssp HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH
Confidence 3444444444567899999999999999999998767899999999999999999999999964 999999987642211
Q ss_pred -----CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 246 -----GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 246 -----~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
..+.||+|++|+++. .+..++..+.++| +|||+|++.+|.+.
T Consensus 139 ~~~~~~~~~fD~I~~d~~~~-------------------------~~~~~l~~~~~~L----~pGG~lv~d~~~~~ 185 (237)
T 3c3y_A 139 LQGQESEGSYDFGFVDADKP-------------------------NYIKYHERLMKLV----KVGGIVAYDNTLWG 185 (237)
T ss_dssp HHSTTCTTCEEEEEECSCGG-------------------------GHHHHHHHHHHHE----EEEEEEEEECTTGG
T ss_pred HhccCCCCCcCEEEECCchH-------------------------HHHHHHHHHHHhc----CCCeEEEEecCCcC
Confidence 136899999997642 1234677778877 99999999988653
No 42
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.50 E-value=4.5e-15 Score=144.77 Aligned_cols=127 Identities=11% Similarity=0.108 Sum_probs=99.1
Q ss_pred EEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCC
Q 011002 161 MLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGN 239 (496)
Q Consensus 161 ~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~ 239 (496)
.++.....++..++...++.+|||+|||+|..|+.||..++..+.|+++|+++.+++.+++++.++|+. +|.++.+|+.
T Consensus 43 ~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~ 122 (242)
T 3r3h_A 43 QVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPAL 122 (242)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHH
T ss_pred ccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 344445555555555567889999999999999999998876789999999999999999999999996 6999999987
Q ss_pred CCcccc----CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 240 ELPKVL----GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 240 ~l~~~~----~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
.+...+ ..+.||+|++|+++. ....++..+.++| +|||+|++..+.+
T Consensus 123 ~~l~~~~~~~~~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~L----kpGG~lv~d~~~~ 173 (242)
T 3r3h_A 123 DTLHSLLNEGGEHQFDFIFIDADKT-------------------------NYLNYYELALKLV----TPKGLIAIDNIFW 173 (242)
T ss_dssp HHHHHHHHHHCSSCEEEEEEESCGG-------------------------GHHHHHHHHHHHE----EEEEEEEEECSSS
T ss_pred HHHHHHhhccCCCCEeEEEEcCChH-------------------------HhHHHHHHHHHhc----CCCeEEEEECCcc
Confidence 653221 026899999997621 0123577777877 9999999877664
Q ss_pred C
Q 011002 316 M 316 (496)
Q Consensus 316 ~ 316 (496)
.
T Consensus 174 ~ 174 (242)
T 3r3h_A 174 D 174 (242)
T ss_dssp S
T ss_pred C
Confidence 3
No 43
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.50 E-value=4e-15 Score=138.97 Aligned_cols=144 Identities=15% Similarity=0.104 Sum_probs=75.6
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc--cCCCCCCEEE
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV--LGLNTVDRVL 254 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~--~~~~~FD~VL 254 (496)
.++.+|||+|||+|..+..++...+ .+.|+++|+++.+++.+++++..+|+ ++.++++|+...... ...+.||+|+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~fD~i~ 106 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIERAERGRPWHAIV 106 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC--------------------CCHHHHHHHHHHHHHTTCCBSEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhhhhhccCcccEEE
Confidence 6789999999999999999999864 46999999999999999999999988 888888888762111 0127899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHH-HH---HHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHH
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLE-DI---QKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALK 329 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~-~i---~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~ 329 (496)
+||||...+.+..-+.......+. .+ .........++..+.++| +|||+|++.++.. ...+.+..++.
T Consensus 107 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L----kpgG~l~~~~~~~---~~~~~~~~~l~ 178 (215)
T 4dzr_A 107 SNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVL----ARGRAGVFLEVGH---NQADEVARLFA 178 (215)
T ss_dssp ECCCCCC------------------------CTTHHHHHHHTCCGGGB----CSSSEEEEEECTT---SCHHHHHHHTG
T ss_pred ECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHh----cCCCeEEEEEECC---ccHHHHHHHHH
Confidence 999998776543211110000000 00 000111244566666665 9999966665553 44555566665
No 44
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.50 E-value=1.1e-13 Score=128.38 Aligned_cols=112 Identities=14% Similarity=0.103 Sum_probs=89.1
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.++.+|||+|||+|..+..++.. +...|+|+|+|+.+++.+++|+..+|+.++.++++|+..++..+..+.||+|++|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~ 120 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLAD 120 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEEC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEEC
Confidence 57899999999999999987764 3468999999999999999999999998899999999876543334789999999
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHH--hhhhcCCCCcEEEEEeCCC
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAID--MVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~--~L~~~lkpGG~LVYSTCSl 315 (496)
||+... . .....++..+.+ +| +|||+|++.+.+-
T Consensus 121 ~p~~~~--------------~-------~~~~~~l~~~~~~~~L----~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 121 PPYNVD--------------S-------ADVDAILAALGTNGWT----REGTVAVVERATT 156 (189)
T ss_dssp CCTTSC--------------H-------HHHHHHHHHHHHSSSC----CTTCEEEEEEETT
T ss_pred CCCCcc--------------h-------hhHHHHHHHHHhcCcc----CCCeEEEEEecCC
Confidence 995421 0 112345555555 55 9999999987764
No 45
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.48 E-value=8e-14 Score=138.17 Aligned_cols=109 Identities=25% Similarity=0.322 Sum_probs=90.0
Q ss_pred hcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCE
Q 011002 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 173 ~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~ 252 (496)
+..+.++++|||+|||+|..++.+|...+ .+.|+|+|+++.+++.+++|+..+|+.|+.++++|+..++ . .+.||+
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~-~--~~~~D~ 189 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVE-L--KDVADR 189 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCC-C--TTCEEE
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcC-c--cCCceE
Confidence 33467899999999999999999999864 4799999999999999999999999999999999998873 2 368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
|++|||. +. ..++..+++.| +|||+|++ +|...
T Consensus 190 Vi~d~p~---~~-----------------------~~~l~~~~~~L----kpgG~l~~-s~~~~ 222 (272)
T 3a27_A 190 VIMGYVH---KT-----------------------HKFLDKTFEFL----KDRGVIHY-HETVA 222 (272)
T ss_dssp EEECCCS---SG-----------------------GGGHHHHHHHE----EEEEEEEE-EEEEE
T ss_pred EEECCcc---cH-----------------------HHHHHHHHHHc----CCCCEEEE-EEcCc
Confidence 9999995 11 22477777877 99998875 45544
No 46
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.46 E-value=1.2e-12 Score=138.20 Aligned_cols=88 Identities=23% Similarity=0.201 Sum_probs=75.3
Q ss_pred HhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc--cCCCC
Q 011002 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV--LGLNT 249 (496)
Q Consensus 172 ~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~--~~~~~ 249 (496)
..+.+.++.+|||+|||+|..++.+|.. .+.|+|+|+|+.+++.+++|+..+|+.|+.++++|+...... +..+.
T Consensus 280 ~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~ 356 (433)
T 1uwv_A 280 EWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNG 356 (433)
T ss_dssp HHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTC
T ss_pred HhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCC
Confidence 3456778899999999999999999876 368999999999999999999999999999999999874221 22368
Q ss_pred CCEEEECCCCCCC
Q 011002 250 VDRVLLDAPCSGT 262 (496)
Q Consensus 250 FD~VLlDpPCSg~ 262 (496)
||+|++|||+.|.
T Consensus 357 fD~Vv~dPPr~g~ 369 (433)
T 1uwv_A 357 FDKVLLDPARAGA 369 (433)
T ss_dssp CSEEEECCCTTCC
T ss_pred CCEEEECCCCccH
Confidence 9999999998765
No 47
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.46 E-value=1e-12 Score=129.65 Aligned_cols=133 Identities=20% Similarity=0.236 Sum_probs=104.0
Q ss_pred hHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccccCC
Q 011002 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGL 247 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~~~ 247 (496)
.++..+++.++.+|||+|||+|..+..++..+++.+.|+++|+++.+++.+++|+..+|+ .++.+..+|+... +..
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~ 179 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG---FDE 179 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC---CSC
T ss_pred HHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc---ccC
Confidence 345566788999999999999999999999876568999999999999999999999998 6799999998765 223
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHH
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYA 327 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~ 327 (496)
+.||+|++|+|+. ..+|..+.++| +|||+|++.+++.. .-..+...
T Consensus 180 ~~~D~V~~~~~~~---------------------------~~~l~~~~~~L----~pgG~l~~~~~~~~---~~~~~~~~ 225 (277)
T 1o54_A 180 KDVDALFLDVPDP---------------------------WNYIDKCWEAL----KGGGRFATVCPTTN---QVQETLKK 225 (277)
T ss_dssp CSEEEEEECCSCG---------------------------GGTHHHHHHHE----EEEEEEEEEESSHH---HHHHHHHH
T ss_pred CccCEEEECCcCH---------------------------HHHHHHHHHHc----CCCCEEEEEeCCHH---HHHHHHHH
Confidence 6799999999842 13477777776 99999999887642 22233344
Q ss_pred HHhCCcEEeec
Q 011002 328 LKKRDVKLVPC 338 (496)
Q Consensus 328 L~~~~~~lv~~ 338 (496)
|...++..+.+
T Consensus 226 l~~~gf~~~~~ 236 (277)
T 1o54_A 226 LQELPFIRIEV 236 (277)
T ss_dssp HHHSSEEEEEE
T ss_pred HHHCCCceeEE
Confidence 55567665544
No 48
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.46 E-value=1.1e-13 Score=130.74 Aligned_cols=110 Identities=18% Similarity=0.134 Sum_probs=85.5
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC--ceEEEEecCCCCCccccCCCC-CCEEE
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV--TNTIVCNYDGNELPKVLGLNT-VDRVL 254 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~--~nv~v~~~D~~~l~~~~~~~~-FD~VL 254 (496)
++.+|||+|||+|..++.++.. ..+.|+|+|+|+.+++.+++|+..+|+ .++.++++|+..+......+. ||+|+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 130 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEE
Confidence 6889999999999999987665 236899999999999999999999999 689999999876533222367 99999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHH--HHhhhhcCCCCcEEEEEeCCCC
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAA--IDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A--~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
+|||+. .+. ...++..+ .++| +|||+|++++|+..
T Consensus 131 ~~~~~~-~~~----------------------~~~~l~~~~~~~~L----kpgG~l~i~~~~~~ 167 (201)
T 2ift_A 131 LDPPFH-FNL----------------------AEQAISLLCENNWL----KPNALIYVETEKDK 167 (201)
T ss_dssp ECCCSS-SCH----------------------HHHHHHHHHHTTCE----EEEEEEEEEEESSS
T ss_pred ECCCCC-Ccc----------------------HHHHHHHHHhcCcc----CCCcEEEEEECCCC
Confidence 999953 211 11234444 2334 99999999999875
No 49
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.45 E-value=1.5e-13 Score=132.35 Aligned_cols=113 Identities=14% Similarity=0.133 Sum_probs=93.0
Q ss_pred cCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc--eEEEEecCCCCCccccCCCCCC
Q 011002 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT--NTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~--nv~v~~~D~~~l~~~~~~~~FD 251 (496)
..++++.+|||+|||+|..|+.|+..+++.+.|+++|+++.+++.+++++.+.|+. ++.++.+|+.++...+..+.||
T Consensus 52 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD 131 (221)
T 3dr5_A 52 TNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQ 131 (221)
T ss_dssp SCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEE
T ss_pred hCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcC
Confidence 34555669999999999999999998876789999999999999999999999997 6999999987754333347899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
+|++|++... ...++..+.++| +|||+|++.++.+
T Consensus 132 ~V~~d~~~~~-------------------------~~~~l~~~~~~L----kpGG~lv~dn~~~ 166 (221)
T 3dr5_A 132 LVFGQVSPMD-------------------------LKALVDAAWPLL----RRGGALVLADALL 166 (221)
T ss_dssp EEEECCCTTT-------------------------HHHHHHHHHHHE----EEEEEEEETTTTG
T ss_pred eEEEcCcHHH-------------------------HHHHHHHHHHHc----CCCcEEEEeCCCC
Confidence 9999976211 123577778887 9999999988776
No 50
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.44 E-value=9e-13 Score=125.73 Aligned_cols=131 Identities=25% Similarity=0.286 Sum_probs=93.2
Q ss_pred cCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc--ccCCCCCC
Q 011002 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK--VLGLNTVD 251 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~--~~~~~~FD 251 (496)
+.+.+|.+|||+|||+|..+.+++..++ .+.|+|+|+|+.+++.+.+.++.. .|+.++.+|+..... .+ .+.||
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~-~~~fD 128 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGI-VEKVD 128 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTT-CCCEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhccc-cccee
Confidence 3467899999999999999999999987 689999999999998887777654 478888899876421 12 26899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHH-HHHHHHHHhhhhcCCCCcEEEEEe---CCCCCcCCHHHHH-H
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQK-QLILAAIDMVDANSKSGGYIVYST---CSIMVTENEAVID-Y 326 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~-~LL~~A~~~L~~~lkpGG~LVYST---CSl~~eENE~vV~-~ 326 (496)
+|++|.+ +| .|. .++..+.++| ||||+|+++. |.-.....+++.. .
T Consensus 129 ~V~~~~~---------~~----------------~~~~~~l~~~~r~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~~ 179 (210)
T 1nt2_A 129 LIYQDIA---------QK----------------NQIEILKANAEFFL----KEKGEVVIMVKARSIDSTAEPEEVFKSV 179 (210)
T ss_dssp EEEECCC---------ST----------------THHHHHHHHHHHHE----EEEEEEEEEEEHHHHCTTSCHHHHHHHH
T ss_pred EEEEecc---------Ch----------------hHHHHHHHHHHHHh----CCCCEEEEEEecCCccccCCHHHHHHHH
Confidence 9999842 11 112 2477778876 9999999984 2222233445442 2
Q ss_pred H--HHhCCcEEeec
Q 011002 327 A--LKKRDVKLVPC 338 (496)
Q Consensus 327 ~--L~~~~~~lv~~ 338 (496)
. |++. ++++..
T Consensus 180 ~~~l~~~-f~~~~~ 192 (210)
T 1nt2_A 180 LKEMEGD-FKIVKH 192 (210)
T ss_dssp HHHHHTT-SEEEEE
T ss_pred HHHHHhh-cEEeee
Confidence 2 5665 776553
No 51
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.44 E-value=9.3e-13 Score=119.79 Aligned_cols=134 Identities=16% Similarity=0.184 Sum_probs=102.4
Q ss_pred hHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCC
Q 011002 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGL 247 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~ 247 (496)
.....+.+.++.+|||+|||+|..+.+++...+ .+.|+++|+++.+++.+++++..+|+. ++ ++..|+..... ...
T Consensus 16 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~-~~~ 92 (178)
T 3hm2_A 16 LAISALAPKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFD-DVP 92 (178)
T ss_dssp HHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGG-GCC
T ss_pred HHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhh-ccC
Confidence 344556788999999999999999999998764 479999999999999999999999997 78 88888754211 112
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHH
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYA 327 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~ 327 (496)
+.||+|+++.+... ..++..+.++| +|||+|++++++. ++...+..+
T Consensus 93 ~~~D~i~~~~~~~~--------------------------~~~l~~~~~~L----~~gG~l~~~~~~~---~~~~~~~~~ 139 (178)
T 3hm2_A 93 DNPDVIFIGGGLTA--------------------------PGVFAAAWKRL----PVGGRLVANAVTV---ESEQMLWAL 139 (178)
T ss_dssp SCCSEEEECC-TTC--------------------------TTHHHHHHHTC----CTTCEEEEEECSH---HHHHHHHHH
T ss_pred CCCCEEEECCcccH--------------------------HHHHHHHHHhc----CCCCEEEEEeecc---ccHHHHHHH
Confidence 68999998665211 23577777876 9999999998875 455566666
Q ss_pred HHhCCcEEeec
Q 011002 328 LKKRDVKLVPC 338 (496)
Q Consensus 328 L~~~~~~lv~~ 338 (496)
+++.++++..+
T Consensus 140 ~~~~~~~~~~~ 150 (178)
T 3hm2_A 140 RKQFGGTISSF 150 (178)
T ss_dssp HHHHCCEEEEE
T ss_pred HHHcCCeeEEE
Confidence 77766665543
No 52
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.44 E-value=1.8e-13 Score=132.60 Aligned_cols=128 Identities=20% Similarity=0.248 Sum_probs=101.2
Q ss_pred hhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccC
Q 011002 168 FLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLG 246 (496)
Q Consensus 168 ~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~ 246 (496)
..+...+++.+|.+|||+|||+|..+.+++..+++.+.|+++|+++.+++.+++++..+|+.+ +.+..+|+... +.
T Consensus 83 ~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~ 159 (255)
T 3mb5_A 83 ALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG---IE 159 (255)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC---CC
T ss_pred HHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc---cC
Confidence 345566788899999999999999999999997667899999999999999999999999987 99999998754 23
Q ss_pred CCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHH
Q 011002 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (496)
Q Consensus 247 ~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~ 326 (496)
.+.||+|++|+|+. ..++..+.++| +|||+|+..+-+. +....+..
T Consensus 160 ~~~~D~v~~~~~~~---------------------------~~~l~~~~~~L----~~gG~l~~~~~~~---~~~~~~~~ 205 (255)
T 3mb5_A 160 EENVDHVILDLPQP---------------------------ERVVEHAAKAL----KPGGFFVAYTPCS---NQVMRLHE 205 (255)
T ss_dssp CCSEEEEEECSSCG---------------------------GGGHHHHHHHE----EEEEEEEEEESSH---HHHHHHHH
T ss_pred CCCcCEEEECCCCH---------------------------HHHHHHHHHHc----CCCCEEEEEECCH---HHHHHHHH
Confidence 46799999998842 12477777877 9999998765332 23333445
Q ss_pred HHHhCC
Q 011002 327 ALKKRD 332 (496)
Q Consensus 327 ~L~~~~ 332 (496)
.+++.+
T Consensus 206 ~l~~~g 211 (255)
T 3mb5_A 206 KLREFK 211 (255)
T ss_dssp HHHHTG
T ss_pred HHHHcC
Confidence 556555
No 53
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.44 E-value=2.9e-13 Score=138.28 Aligned_cols=108 Identities=25% Similarity=0.304 Sum_probs=91.5
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
.+|.+|||+|||+|+.++. |. +.+.|+|+|+|+.+++.+++|+..+|+ .++.++++|+..+. +.||+|++
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~-----~~fD~Vi~ 264 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD-----VKGNRVIM 264 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC-----CCEEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc-----CCCcEEEE
Confidence 5789999999999999998 66 357999999999999999999999999 57999999998765 67999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHH
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~ 326 (496)
|||..+. .++..++++| +|||+|+|++|+.. .+...+.
T Consensus 265 dpP~~~~--------------------------~~l~~~~~~L----~~gG~l~~~~~~~~---~~~~~~~ 302 (336)
T 2yx1_A 265 NLPKFAH--------------------------KFIDKALDIV----EEGGVIHYYTIGKD---FDKAIKL 302 (336)
T ss_dssp CCTTTGG--------------------------GGHHHHHHHE----EEEEEEEEEEEESS---SHHHHHH
T ss_pred CCcHhHH--------------------------HHHHHHHHHc----CCCCEEEEEEeecC---chHHHHH
Confidence 9996532 3577788887 99999999999987 4444443
No 54
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.43 E-value=7.5e-13 Score=125.39 Aligned_cols=140 Identities=14% Similarity=0.124 Sum_probs=100.7
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.++.+|||+|||+|..+..++...+ .+.|+|+|+++.+++.+++++...|+.|+.++.+|+..++..+..+.||.|+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 4688999999999999999999875 479999999999999999999999999999999999887644445789999999
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEEe
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKLV 336 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~~lv 336 (496)
+|.. ..+.. ..... ..+..+|..+.++| +|||+|+++|-.. ..-..+...+...++.++
T Consensus 119 ~~~~---------~~~~~---~~~~~--~~~~~~l~~~~~~L----kpgG~l~~~~~~~---~~~~~~~~~~~~~g~~~~ 177 (214)
T 1yzh_A 119 FSDP---------WPKKR---HEKRR--LTYKTFLDTFKRIL----PENGEIHFKTDNR---GLFEYSLVSFSQYGMKLN 177 (214)
T ss_dssp SCCC---------CCSGG---GGGGS--TTSHHHHHHHHHHS----CTTCEEEEEESCH---HHHHHHHHHHHHHTCEEE
T ss_pred CCCC---------ccccc---hhhhc--cCCHHHHHHHHHHc----CCCcEEEEEeCCH---HHHHHHHHHHHHCCCeee
Confidence 7721 11100 00000 01455788888876 9999999876321 111222233445577765
Q ss_pred ec
Q 011002 337 PC 338 (496)
Q Consensus 337 ~~ 338 (496)
.+
T Consensus 178 ~~ 179 (214)
T 1yzh_A 178 GV 179 (214)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 55
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.43 E-value=1.1e-13 Score=135.25 Aligned_cols=122 Identities=20% Similarity=0.261 Sum_probs=96.3
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
+.++.+|||+|||+|..+..++.. ..+.|+|+|+++.+++.+++++...|+.+ +.++.+|+..++. ..+.||+|+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~fD~i~ 119 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF--RNEELDLIW 119 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC--CTTCEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC--CCCCEEEEE
Confidence 578999999999999999999887 34699999999999999999999999965 9999999988763 347899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHH
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYAL 328 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L 328 (496)
+..+.... . ...+|..+.++| +|||+|+++++++........+..++
T Consensus 120 ~~~~~~~~-------------~----------~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~~~ 166 (267)
T 3kkz_A 120 SEGAIYNI-------------G----------FERGLNEWRKYL----KKGGYLAVSECSWFTDERPAEINDFW 166 (267)
T ss_dssp ESSCGGGT-------------C----------HHHHHHHHGGGE----EEEEEEEEEEEEESSSCCCHHHHHHH
T ss_pred EcCCceec-------------C----------HHHHHHHHHHHc----CCCCEEEEEEeeecCCCChHHHHHHH
Confidence 86542111 1 133577777776 99999999999876665554444443
No 56
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.43 E-value=9.3e-14 Score=136.15 Aligned_cols=130 Identities=13% Similarity=0.055 Sum_probs=98.1
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc-cCCCCCCEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~-~~~~~FD~VL 254 (496)
+.++.+|||+|||+|..++.+|...+ .+.|+++|+++.+++.+++|+.++|+.||.++++|+.+++.. ...+.||+|+
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEE
Confidence 46789999999999999999998875 479999999999999999999999999999999998776531 1136899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcE
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVK 334 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~~ 334 (496)
+.+- . ++ ..++..+.++| +|||++++..+....+|-+ .+...+...+++
T Consensus 157 s~a~----------------~---~~-------~~ll~~~~~~L----kpgG~l~~~~g~~~~~e~~-~~~~~l~~~G~~ 205 (249)
T 3g89_A 157 ARAV----------------A---PL-------CVLSELLLPFL----EVGGAAVAMKGPRVEEELA-PLPPALERLGGR 205 (249)
T ss_dssp EESS----------------C---CH-------HHHHHHHGGGE----EEEEEEEEEECSCCHHHHT-THHHHHHHHTEE
T ss_pred ECCc----------------C---CH-------HHHHHHHHHHc----CCCeEEEEEeCCCcHHHHH-HHHHHHHHcCCe
Confidence 8431 0 01 24567777776 9999999988875433322 233455566666
Q ss_pred Eee
Q 011002 335 LVP 337 (496)
Q Consensus 335 lv~ 337 (496)
++.
T Consensus 206 ~~~ 208 (249)
T 3g89_A 206 LGE 208 (249)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 57
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.43 E-value=1.1e-12 Score=126.78 Aligned_cols=134 Identities=20% Similarity=0.175 Sum_probs=103.2
Q ss_pred hHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc-CCceEEEEecCCCCCccccCC
Q 011002 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-GVTNTIVCNYDGNELPKVLGL 247 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~-g~~nv~v~~~D~~~l~~~~~~ 247 (496)
.++..+.+.++.+|||+|||+|..+..++..+++.+.|+++|+++.+++.+++++..+ |..++.+..+|+...+ +..
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~--~~~ 164 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE--LEE 164 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC--CCT
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC--CCC
Confidence 4456677889999999999999999999998765689999999999999999999998 8778999999987763 233
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHH
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYA 327 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~ 327 (496)
+.||+|++|+|.. ..+|..+.++| +|||+|++++.+. +.-..+...
T Consensus 165 ~~~D~v~~~~~~~---------------------------~~~l~~~~~~L----~~gG~l~~~~~~~---~~~~~~~~~ 210 (258)
T 2pwy_A 165 AAYDGVALDLMEP---------------------------WKVLEKAALAL----KPDRFLVAYLPNI---TQVLELVRA 210 (258)
T ss_dssp TCEEEEEEESSCG---------------------------GGGHHHHHHHE----EEEEEEEEEESCH---HHHHHHHHH
T ss_pred CCcCEEEECCcCH---------------------------HHHHHHHHHhC----CCCCEEEEEeCCH---HHHHHHHHH
Confidence 6899999998731 13477777877 9999999887654 122222233
Q ss_pred HHhCCcEEeec
Q 011002 328 LKKRDVKLVPC 338 (496)
Q Consensus 328 L~~~~~~lv~~ 338 (496)
|+..++..+.+
T Consensus 211 l~~~gf~~~~~ 221 (258)
T 2pwy_A 211 AEAHPFRLERV 221 (258)
T ss_dssp HTTTTEEEEEE
T ss_pred HHHCCCceEEE
Confidence 45556655443
No 58
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.43 E-value=6.9e-13 Score=128.14 Aligned_cols=131 Identities=16% Similarity=0.078 Sum_probs=97.3
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc-cCCCCCCEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~-~~~~~FD~V 253 (496)
.+.++.+|||+|||+|..+..++...+ .+.|+|+|+++.+++.+++++..+|+.++.++++|+.+++.. ...+.||+|
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEE
Confidence 345788999999999999999998654 479999999999999999999999998899999998766421 013689999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCc
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDV 333 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~ 333 (496)
++++. .. ...++..+.++| +|||+|++..+....+|-+. +...++..++
T Consensus 146 ~~~~~----------------~~----------~~~~l~~~~~~L----kpgG~l~~~~g~~~~~~~~~-~~~~l~~~g~ 194 (240)
T 1xdz_A 146 TARAV----------------AR----------LSVLSELCLPLV----KKNGLFVALKAASAEEELNA-GKKAITTLGG 194 (240)
T ss_dssp EEECC----------------SC----------HHHHHHHHGGGE----EEEEEEEEEECC-CHHHHHH-HHHHHHHTTE
T ss_pred EEecc----------------CC----------HHHHHHHHHHhc----CCCCEEEEEeCCCchHHHHH-HHHHHHHcCC
Confidence 98551 00 234677777776 99999999877765433222 2334556666
Q ss_pred EEee
Q 011002 334 KLVP 337 (496)
Q Consensus 334 ~lv~ 337 (496)
+++.
T Consensus 195 ~~~~ 198 (240)
T 1xdz_A 195 ELEN 198 (240)
T ss_dssp EEEE
T ss_pred eEeE
Confidence 6543
No 59
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.42 E-value=1.5e-13 Score=129.26 Aligned_cols=123 Identities=17% Similarity=0.250 Sum_probs=90.6
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc------cC---
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV------LG--- 246 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~------~~--- 246 (496)
+++|.+|||+|||||++|.++++. .+.|+|+|+++. ..+.++.++++|+...+.. +.
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~-----------~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 88 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEM-----------EEIAGVRFIRCDIFKETIFDDIDRALREEG 88 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCC-----------CCCTTCEEEECCTTSSSHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEecccc-----------ccCCCeEEEEccccCHHHHHHHHHHhhccc
Confidence 468999999999999999999887 589999999974 2346789999999875421 11
Q ss_pred CCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHH
Q 011002 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (496)
Q Consensus 247 ~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~ 326 (496)
.+.||+|++|+|+..+|.. ..+......++..+|..|.++| +|||+||..+ +..++...+..
T Consensus 89 ~~~~D~Vlsd~~~~~~g~~-----------~~d~~~~~~l~~~~l~~a~~~L----kpGG~lv~k~---~~~~~~~~~~~ 150 (191)
T 3dou_A 89 IEKVDDVVSDAMAKVSGIP-----------SRDHAVSYQIGQRVMEIAVRYL----RNGGNVLLKQ---FQGDMTNDFIA 150 (191)
T ss_dssp CSSEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHE----EEEEEEEEEE---ECSTHHHHHHH
T ss_pred CCcceEEecCCCcCCCCCc-----------ccCHHHHHHHHHHHHHHHHHHc----cCCCEEEEEE---cCCCCHHHHHH
Confidence 1389999999998877752 1222333456677888888887 9999998654 34455555666
Q ss_pred HHHh
Q 011002 327 ALKK 330 (496)
Q Consensus 327 ~L~~ 330 (496)
.++.
T Consensus 151 ~l~~ 154 (191)
T 3dou_A 151 IWRK 154 (191)
T ss_dssp HHGG
T ss_pred HHHH
Confidence 6654
No 60
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.42 E-value=2.2e-13 Score=130.97 Aligned_cols=93 Identities=17% Similarity=0.146 Sum_probs=78.1
Q ss_pred chhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCcccc
Q 011002 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVL 245 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~ 245 (496)
..++..+....++.+|||+|||+|+.+..++.. .+.|+|+|+|+.+++.+++|+..+|+ .++.++++|+..++.
T Consensus 67 ~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-- 141 (241)
T 3gdh_A 67 EHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS-- 141 (241)
T ss_dssp HHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG--
T ss_pred HHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc--
Confidence 334444444457999999999999999999985 27999999999999999999999999 579999999987752
Q ss_pred CCCCCCEEEECCCCCCCCcc
Q 011002 246 GLNTVDRVLLDAPCSGTGVI 265 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg~Gvi 265 (496)
.+.||+|++||||.+.+..
T Consensus 142 -~~~~D~v~~~~~~~~~~~~ 160 (241)
T 3gdh_A 142 -FLKADVVFLSPPWGGPDYA 160 (241)
T ss_dssp -GCCCSEEEECCCCSSGGGG
T ss_pred -cCCCCEEEECCCcCCcchh
Confidence 2689999999999987643
No 61
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.42 E-value=1.2e-13 Score=138.70 Aligned_cols=131 Identities=14% Similarity=0.102 Sum_probs=93.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--C--CceEEEEecCCCCCccccCCCCCCEE
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--G--VTNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~--g--~~nv~v~~~D~~~l~~~~~~~~FD~V 253 (496)
.+.+|||+|||+|+.+..++...+ .+.|+++|+++.+++.+++++..+ + ..++.++.+|+..+... ..+.||+|
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-~~~~fD~I 167 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK-FKNEFDVI 167 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG-CSSCEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh-CCCCceEE
Confidence 458999999999999999987643 479999999999999999998652 2 35799999998764322 13689999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC--CCcCCHHHHHHHHHhC
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI--MVTENEAVIDYALKKR 331 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl--~~eENE~vV~~~L~~~ 331 (496)
++|+|+...|.. ....+.+++..+.++| +|||+|++.+|+. ..++...+++.+.+..
T Consensus 168 i~d~~~~~~~~~-----------------~~l~~~~~l~~~~~~L----kpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F 226 (296)
T 1inl_A 168 IIDSTDPTAGQG-----------------GHLFTEEFYQACYDAL----KEDGVFSAETEDPFYDIGWFKLAYRRISKVF 226 (296)
T ss_dssp EEEC---------------------------CCSHHHHHHHHHHE----EEEEEEEEECCCTTTTHHHHHHHHHHHHHHC
T ss_pred EEcCCCcccCch-----------------hhhhHHHHHHHHHHhc----CCCcEEEEEccCcccCHHHHHHHHHHHHHHC
Confidence 999986423210 0001345677788877 9999999999983 3445556666655443
No 62
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.42 E-value=9.3e-13 Score=124.18 Aligned_cols=141 Identities=16% Similarity=0.233 Sum_probs=109.0
Q ss_pred HHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCC
Q 011002 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~ 249 (496)
....+.+.++.+|||+|||+|..+..++...++.+.|+++|+++.+++.+++++...|+.++.++.+|+..++ +..+.
T Consensus 29 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 106 (219)
T 3dh0_A 29 VLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP--LPDNT 106 (219)
T ss_dssp HHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS--SCSSC
T ss_pred HHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC--CCCCC
Confidence 4455677889999999999999999999987556799999999999999999999999989999999998876 33478
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc---------CC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT---------EN 320 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~e---------EN 320 (496)
||+|++... +..-+ ....+|..+.++| +|||+|+++++..... -+
T Consensus 107 fD~v~~~~~------l~~~~----------------~~~~~l~~~~~~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~ 160 (219)
T 3dh0_A 107 VDFIFMAFT------FHELS----------------EPLKFLEELKRVA----KPFAYLAIIDWKKEERDKGPPPEEVYS 160 (219)
T ss_dssp EEEEEEESC------GGGCS----------------SHHHHHHHHHHHE----EEEEEEEEEEECSSCCSSSCCGGGSCC
T ss_pred eeEEEeehh------hhhcC----------------CHHHHHHHHHHHh----CCCeEEEEEEecccccccCCchhcccC
Confidence 999998532 11000 1245678888887 9999999998664432 23
Q ss_pred HHHHHHHHHhCCcEEeec
Q 011002 321 EAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 321 E~vV~~~L~~~~~~lv~~ 338 (496)
.+.+..++++.+++++..
T Consensus 161 ~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 161 EWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEE
Confidence 566677777777776553
No 63
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.40 E-value=9.7e-14 Score=131.86 Aligned_cols=120 Identities=12% Similarity=0.135 Sum_probs=94.3
Q ss_pred chhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCcccc
Q 011002 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVL 245 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~ 245 (496)
..+...++...++.+|||+|||+|..+.+++..+++.+.|+++|+++.+++.+++++...|+.+ +.++.+|+.......
T Consensus 53 ~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 132 (225)
T 3tr6_A 53 AQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAEL 132 (225)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHh
Confidence 3444444455578899999999999999999988756899999999999999999999999976 999999986542211
Q ss_pred CC----CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 246 GL----NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 246 ~~----~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
.. +.||+|++|++. ..+..++..+.++| +|||+|++..+.+
T Consensus 133 ~~~~~~~~fD~v~~~~~~-------------------------~~~~~~l~~~~~~L----~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 133 IHAGQAWQYDLIYIDADK-------------------------ANTDLYYEESLKLL----REGGLIAVDNVLR 177 (225)
T ss_dssp HTTTCTTCEEEEEECSCG-------------------------GGHHHHHHHHHHHE----EEEEEEEEECSSG
T ss_pred hhccCCCCccEEEECCCH-------------------------HHHHHHHHHHHHhc----CCCcEEEEeCCCc
Confidence 11 689999999861 11234677777877 9999999887664
No 64
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.40 E-value=2e-12 Score=121.15 Aligned_cols=126 Identities=20% Similarity=0.202 Sum_probs=96.7
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
.+.++.+|||+|||+|..+..++.. +.+.|+|+|+++.+++.+++|+..+|+ ++.++++|+..++ ..||+|+
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~-----~~~D~v~ 117 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN-----SRVDIVI 117 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC-----CCCSEEE
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC-----CCCCEEE
Confidence 4567899999999999999999876 235899999999999999999999998 8999999998764 4799999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcE
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVK 334 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~~ 334 (496)
+|||+.... +. ....+|..+.+++ || +|+.| +.+.++.+.+..++...+++
T Consensus 118 ~~~p~~~~~---~~-----------------~~~~~l~~~~~~l------~~--~~~~~-~~~~~~~~~~~~~l~~~g~~ 168 (207)
T 1wy7_A 118 MNPPFGSQR---KH-----------------ADRPFLLKAFEIS------DV--VYSIH-LAKPEVRRFIEKFSWEHGFV 168 (207)
T ss_dssp ECCCCSSSS---TT-----------------TTHHHHHHHHHHC------SE--EEEEE-ECCHHHHHHHHHHHHHTTEE
T ss_pred EcCCCcccc---CC-----------------chHHHHHHHHHhc------Cc--EEEEE-eCCcCCHHHHHHHHHHCCCe
Confidence 999975321 10 1134566777653 43 66777 33456777777888887766
Q ss_pred Eee
Q 011002 335 LVP 337 (496)
Q Consensus 335 lv~ 337 (496)
+..
T Consensus 169 ~~~ 171 (207)
T 1wy7_A 169 VTH 171 (207)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 65
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.39 E-value=1.2e-12 Score=128.59 Aligned_cols=114 Identities=19% Similarity=0.200 Sum_probs=94.7
Q ss_pred hHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc-C--CceEEEEecCCCCCcccc
Q 011002 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-G--VTNTIVCNYDGNELPKVL 245 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~-g--~~nv~v~~~D~~~l~~~~ 245 (496)
.++..+++.++.+|||+|||+|..+.+++..+++.+.|+++|+++.+++.+++++... | ..++.++.+|+...+ +
T Consensus 90 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~--~ 167 (280)
T 1i9g_A 90 QIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE--L 167 (280)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC--C
T ss_pred HHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC--C
Confidence 4455677889999999999999999999998766689999999999999999999998 7 678999999987764 2
Q ss_pred CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
..+.||+|++|+|. | ..+|..+.++| +|||+|++++++.
T Consensus 168 ~~~~~D~v~~~~~~---------~------------------~~~l~~~~~~L----~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 168 PDGSVDRAVLDMLA---------P------------------WEVLDAVSRLL----VAGGVLMVYVATV 206 (280)
T ss_dssp CTTCEEEEEEESSC---------G------------------GGGHHHHHHHE----EEEEEEEEEESSH
T ss_pred CCCceeEEEECCcC---------H------------------HHHHHHHHHhC----CCCCEEEEEeCCH
Confidence 23689999998761 1 12477777877 9999999988764
No 66
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.39 E-value=9.8e-13 Score=125.30 Aligned_cols=117 Identities=17% Similarity=0.161 Sum_probs=90.9
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.++.+|||+|||+|..+..+|...+ ...|+|+|+++.+++.+++++...|+.|+.++.+|+..++..+..+.||.|+++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 4678999999999999999999864 479999999999999999999999999999999999886544445789999987
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.|+--. +....+.. + .+..+|..+.++| +|||.|+++|
T Consensus 116 ~~~p~~----~~~~~~~r--------l--~~~~~l~~~~~~L----kpgG~l~~~t 153 (213)
T 2fca_A 116 FSDPWP----KKRHEKRR--------L--TYSHFLKKYEEVM----GKGGSIHFKT 153 (213)
T ss_dssp SCCCCC----SGGGGGGS--------T--TSHHHHHHHHHHH----TTSCEEEEEE
T ss_pred CCCCCc----Cccccccc--------c--CcHHHHHHHHHHc----CCCCEEEEEe
Confidence 653100 00000000 0 1356788888887 9999999987
No 67
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.38 E-value=1.5e-12 Score=122.01 Aligned_cols=125 Identities=12% Similarity=0.079 Sum_probs=99.3
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
+.++.+|||+|||+|..+..++.. +.+.|+|+|+++.+++.+++++...++.++.+..+|+..+. .+.||+|++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~fD~i~~ 131 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV----DGKFDLIVA 131 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC----CSCEEEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC----CCCceEEEE
Confidence 568899999999999999998874 34699999999999999999999999988999999997654 278999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEE
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKL 335 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~~l 335 (496)
++|. .....++..+.++| +|||+|++++... +....+...+.+.++++
T Consensus 132 ~~~~-------------------------~~~~~~l~~~~~~L----~~gG~l~~~~~~~---~~~~~~~~~~~~~Gf~~ 179 (205)
T 3grz_A 132 NILA-------------------------EILLDLIPQLDSHL----NEDGQVIFSGIDY---LQLPKIEQALAENSFQI 179 (205)
T ss_dssp ESCH-------------------------HHHHHHGGGSGGGE----EEEEEEEEEEEEG---GGHHHHHHHHHHTTEEE
T ss_pred CCcH-------------------------HHHHHHHHHHHHhc----CCCCEEEEEecCc---ccHHHHHHHHHHcCCce
Confidence 8761 11244566666665 9999999976543 34556667777778777
Q ss_pred eec
Q 011002 336 VPC 338 (496)
Q Consensus 336 v~~ 338 (496)
+..
T Consensus 180 ~~~ 182 (205)
T 3grz_A 180 DLK 182 (205)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 68
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.38 E-value=8.4e-13 Score=124.62 Aligned_cols=111 Identities=16% Similarity=0.076 Sum_probs=84.3
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEECC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDp 257 (496)
++.+|||+|||+|..++.++... ...|+|+|+|+.+++.+++|+..+|+.++.++++|+..+... ..+.||+|++||
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~-~~~~fD~V~~~~ 130 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQ-KGTPHNIVFVDP 130 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSS-CCCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhh-cCCCCCEEEECC
Confidence 68899999999999999877652 258999999999999999999999998899999998764221 236899999999
Q ss_pred CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 258 PCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
|+. .+. ...++....+. ..|+|||+|++++|+..
T Consensus 131 p~~-~~~----------------------~~~~l~~l~~~--~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 131 PFR-RGL----------------------LEETINLLEDN--GWLADEALIYVESEVEN 164 (202)
T ss_dssp SSS-TTT----------------------HHHHHHHHHHT--TCEEEEEEEEEEEEGGG
T ss_pred CCC-CCc----------------------HHHHHHHHHhc--CccCCCcEEEEEECCCc
Confidence 943 111 01223333331 11499999999988753
No 69
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.38 E-value=4.1e-12 Score=122.64 Aligned_cols=115 Identities=17% Similarity=0.255 Sum_probs=92.8
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~V 253 (496)
.+.++.+|||+|||+|..+..++...+ +.|+|+|+++.+++.+++++...|+.+ +.++.+|+..++. ..+.||+|
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~fD~v 118 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF--QNEELDLI 118 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS--CTTCEEEE
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC--CCCCEEEE
Confidence 456889999999999999999999864 499999999999999999999999976 9999999988763 34789999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCC
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTEN 320 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eEN 320 (496)
++....... . ...+|..+.++| +|||+|+++++++.....
T Consensus 119 ~~~~~l~~~-------------~----------~~~~l~~~~~~L----~pgG~l~~~~~~~~~~~~ 158 (257)
T 3f4k_A 119 WSEGAIYNI-------------G----------FERGMNEWSKYL----KKGGFIAVSEASWFTSER 158 (257)
T ss_dssp EEESCSCCC-------------C----------HHHHHHHHHTTE----EEEEEEEEEEEEESSSCC
T ss_pred EecChHhhc-------------C----------HHHHHHHHHHHc----CCCcEEEEEEeeccCCCC
Confidence 986331111 1 124577777776 999999999987655443
No 70
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.38 E-value=2.8e-12 Score=117.42 Aligned_cols=118 Identities=14% Similarity=0.148 Sum_probs=95.5
Q ss_pred chhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce--EEEEecCCCCCccc
Q 011002 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN--TIVCNYDGNELPKV 244 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n--v~v~~~D~~~l~~~ 244 (496)
+......+.+.++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++...++.+ +.++..|+.....
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~- 116 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK- 116 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT-
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc-
Confidence 344556667778999999999999999988876 4699999999999999999999999987 9999999876432
Q ss_pred cCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 245 LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 245 ~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
.+.||+|++|+|... .. .....++..+.++| +|||++++++++.
T Consensus 117 --~~~~D~v~~~~~~~~--------------~~-------~~~~~~l~~~~~~L----~~gG~l~~~~~~~ 160 (194)
T 1dus_A 117 --DRKYNKIITNPPIRA--------------GK-------EVLHRIIEEGKELL----KDNGEIWVVIQTK 160 (194)
T ss_dssp --TSCEEEEEECCCSTT--------------CH-------HHHHHHHHHHHHHE----EEEEEEEEEEEST
T ss_pred --cCCceEEEECCCccc--------------ch-------hHHHHHHHHHHHHc----CCCCEEEEEECCC
Confidence 368999999988431 11 12345677888877 9999999998775
No 71
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.38 E-value=1.5e-12 Score=122.24 Aligned_cols=120 Identities=17% Similarity=0.150 Sum_probs=94.5
Q ss_pred ceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecC
Q 011002 158 GFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD 237 (496)
Q Consensus 158 G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D 237 (496)
|.++.+..........+.+.++.+|||+|||+|..+..++.. .+.|+++|+++.+++.+++++..+|+.++.+..+|
T Consensus 57 ~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 133 (210)
T 3lbf_A 57 GQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGD 133 (210)
T ss_dssp SCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred CCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECC
Confidence 445445444445566778889999999999999999999987 37899999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 238 GNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 238 ~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
+...... .+.||+|+++.++... | ..+.++| +|||+|+.+...
T Consensus 134 ~~~~~~~--~~~~D~i~~~~~~~~~------~----------------------~~~~~~L----~pgG~lv~~~~~ 176 (210)
T 3lbf_A 134 GWQGWQA--RAPFDAIIVTAAPPEI------P----------------------TALMTQL----DEGGILVLPVGE 176 (210)
T ss_dssp GGGCCGG--GCCEEEEEESSBCSSC------C----------------------THHHHTE----EEEEEEEEEECS
T ss_pred cccCCcc--CCCccEEEEccchhhh------h----------------------HHHHHhc----ccCcEEEEEEcC
Confidence 9775432 3789999998654211 0 1234555 999999998766
No 72
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.38 E-value=2.6e-12 Score=132.95 Aligned_cols=155 Identities=14% Similarity=0.112 Sum_probs=111.6
Q ss_pred cccccceEEEecCcch------hHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc
Q 011002 153 PEYMAGFYMLQSASSF------LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM 226 (496)
Q Consensus 153 ~~~~~G~~~iQd~sS~------l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~ 226 (496)
..+..|+-..|..+.+ ..+.++ +.++.+|||+|||+|+.++.++.... .+.|+|+|+|+.+++.++.|+..+
T Consensus 187 ~l~~rgyr~~~~~a~l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~ 264 (373)
T 3tm4_A 187 SLHKRPWRVYDHPAHLKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAA 264 (373)
T ss_dssp CTTCCTTCCSCCTTCCCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHT
T ss_pred ccccCCcccccCCCCccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHc
Confidence 4566665555544332 223334 67899999999999999999988753 358999999999999999999999
Q ss_pred CC-ceEEEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC
Q 011002 227 GV-TNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG 305 (496)
Q Consensus 227 g~-~nv~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpG 305 (496)
|+ .++.+.++|+..++.. .+.||+|++|||+.-. ......+..++.+++..+.+. | |
T Consensus 265 gl~~~i~~~~~D~~~~~~~--~~~fD~Ii~npPyg~r--------------~~~~~~~~~ly~~~~~~l~r~----l--~ 322 (373)
T 3tm4_A 265 GVLDKIKFIQGDATQLSQY--VDSVDFAISNLPYGLK--------------IGKKSMIPDLYMKFFNELAKV----L--E 322 (373)
T ss_dssp TCGGGCEEEECCGGGGGGT--CSCEEEEEEECCCC--------------------CCHHHHHHHHHHHHHHH----E--E
T ss_pred CCCCceEEEECChhhCCcc--cCCcCEEEECCCCCcc--------------cCcchhHHHHHHHHHHHHHHH----c--C
Confidence 99 5799999999987643 3789999999997321 000111334556677777665 3 7
Q ss_pred cEEEEEeCCCCCcCCHHHHHHHHHhCCcEEee
Q 011002 306 GYIVYSTCSIMVTENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 306 G~LVYSTCSl~~eENE~vV~~~L~~~~~~lv~ 337 (496)
|.++|.|| +...+...+.+.++++..
T Consensus 323 g~~~~i~~------~~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 323 KRGVFITT------EKKAIEEAIAENGFEIIH 348 (373)
T ss_dssp EEEEEEES------CHHHHHHHHHHTTEEEEE
T ss_pred CeEEEEEC------CHHHHHHHHHHcCCEEEE
Confidence 88889888 455566667777776654
No 73
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.37 E-value=6.3e-12 Score=121.98 Aligned_cols=148 Identities=14% Similarity=0.113 Sum_probs=96.1
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCC-CccccC---CCCCCE
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNE-LPKVLG---LNTVDR 252 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~-l~~~~~---~~~FD~ 252 (496)
++.+|||+|||+|..++.++...++ +.|+|+|+++.+++.+++|+..+|+.+ +.++++|+.. +...+. .+.||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNG-WYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 5789999999999999999987643 799999999999999999999999976 9999999865 222222 157999
Q ss_pred EEECCCCCCCCc-cc----C-----CchhhccCC------HHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 253 VLLDAPCSGTGV-IS----K-----DESVKTSKS------LEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 253 VLlDpPCSg~Gv-i~----r-----~p~i~~~~s------~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
|++|||+...+. +. + .|...+... +.. .+ .....++..+..++ +++|.++.. +.
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG--~l-~~~~~~~~~~~~~l----~~~g~~~~~---~~ 213 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGG--EL-EFVKRIIHDSLQLK----KRLRWYSCM---LG 213 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHT--HH-HHHHHHHHHHHHHG----GGBSCEEEE---ES
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCC--EE-EEEHHHHHHHHhcc----cceEEEEEC---CC
Confidence 999999987651 10 0 111111000 001 11 12234566666665 888876532 33
Q ss_pred CcCCHHHHHHHHHhCCcEEe
Q 011002 317 VTENEAVIDYALKKRDVKLV 336 (496)
Q Consensus 317 ~eENE~vV~~~L~~~~~~lv 336 (496)
...+...+..++++.++..+
T Consensus 214 ~~~~~~~~~~~l~~~Gf~~v 233 (254)
T 2h00_A 214 KKCSLAPLKEELRIQGVPKV 233 (254)
T ss_dssp STTSHHHHHHHHHHTTCSEE
T ss_pred ChhHHHHHHHHHHHcCCCce
Confidence 44564556667777665443
No 74
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.37 E-value=1.4e-12 Score=125.69 Aligned_cols=122 Identities=14% Similarity=0.141 Sum_probs=98.4
Q ss_pred ecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCc
Q 011002 163 QSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP 242 (496)
Q Consensus 163 Qd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~ 242 (496)
|++++..++..+++.++.+|||+|||+|..+..++... +.|+++|+++.+++.+++++...|+.++.++.+|+..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 82 (239)
T 1xxl_A 6 HHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP 82 (239)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC
T ss_pred cCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC
Confidence 56677788889999999999999999999999888764 489999999999999999999999999999999998876
Q ss_pred cccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 243 KVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 243 ~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
+..+.||+|++.-. +. .+. + ...+|..+.++| +|||+|+++++..
T Consensus 83 --~~~~~fD~v~~~~~------l~-------~~~--~-------~~~~l~~~~~~L----kpgG~l~~~~~~~ 127 (239)
T 1xxl_A 83 --FPDDSFDIITCRYA------AH-------HFS--D-------VRKAVREVARVL----KQDGRFLLVDHYA 127 (239)
T ss_dssp --SCTTCEEEEEEESC------GG-------GCS--C-------HHHHHHHHHHHE----EEEEEEEEEEECB
T ss_pred --CCCCcEEEEEECCc------hh-------hcc--C-------HHHHHHHHHHHc----CCCcEEEEEEcCC
Confidence 33478999998421 10 010 1 134677888887 9999999987653
No 75
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.37 E-value=1.7e-12 Score=126.09 Aligned_cols=132 Identities=16% Similarity=0.165 Sum_probs=95.2
Q ss_pred CcccccceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceE
Q 011002 152 TPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNT 231 (496)
Q Consensus 152 ~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv 231 (496)
.+.|.......|......++..+.+.++.+|||+|||+|..+..++... +.|+++|+|+.+++.+++++...|+.++
T Consensus 11 ~~~~~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v 87 (260)
T 1vl5_A 11 HHMYVTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQV 87 (260)
T ss_dssp ------------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSE
T ss_pred ceeeecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCce
Confidence 4566666677777776677777888899999999999999999888764 4899999999999999999999999899
Q ss_pred EEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 232 IVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 232 ~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
.++.+|+..++ ++.+.||+|++.-. .. +... ...+|..+.++| +|||+|+++
T Consensus 88 ~~~~~d~~~l~--~~~~~fD~V~~~~~---l~---------~~~d----------~~~~l~~~~r~L----kpgG~l~~~ 139 (260)
T 1vl5_A 88 EYVQGDAEQMP--FTDERFHIVTCRIA---AH---------HFPN----------PASFVSEAYRVL----KKGGQLLLV 139 (260)
T ss_dssp EEEECCC-CCC--SCTTCEEEEEEESC---GG---------GCSC----------HHHHHHHHHHHE----EEEEEEEEE
T ss_pred EEEEecHHhCC--CCCCCEEEEEEhhh---hH---------hcCC----------HHHHHHHHHHHc----CCCCEEEEE
Confidence 99999998876 33478999997421 10 1001 124677888887 999999987
Q ss_pred eCC
Q 011002 312 TCS 314 (496)
Q Consensus 312 TCS 314 (496)
+..
T Consensus 140 ~~~ 142 (260)
T 1vl5_A 140 DNS 142 (260)
T ss_dssp EEE
T ss_pred EcC
Confidence 543
No 76
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.37 E-value=6e-13 Score=128.20 Aligned_cols=122 Identities=12% Similarity=0.110 Sum_probs=95.6
Q ss_pred ecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCC
Q 011002 163 QSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNEL 241 (496)
Q Consensus 163 Qd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l 241 (496)
+.....++..++...++.+|||+|||+|..+..++...+ .+.|+++|+++.+++.+++++...|+. ++.++.+|+...
T Consensus 56 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 134 (232)
T 3ntv_A 56 DRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQ 134 (232)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 333344455555556789999999999999999998544 589999999999999999999999996 799999999775
Q ss_pred cc-ccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 242 PK-VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 242 ~~-~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
.. .. .+.||+|++|+++.. +..++..+.++| +|||+|++..+-+
T Consensus 135 ~~~~~-~~~fD~V~~~~~~~~-------------------------~~~~l~~~~~~L----kpgG~lv~d~~~~ 179 (232)
T 3ntv_A 135 FENVN-DKVYDMIFIDAAKAQ-------------------------SKKFFEIYTPLL----KHQGLVITDNVLY 179 (232)
T ss_dssp HHHHT-TSCEEEEEEETTSSS-------------------------HHHHHHHHGGGE----EEEEEEEEECTTG
T ss_pred HHhhc-cCCccEEEEcCcHHH-------------------------HHHHHHHHHHhc----CCCeEEEEeeCCc
Confidence 33 22 378999999976432 234577777776 9999999865544
No 77
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.36 E-value=8e-12 Score=118.90 Aligned_cols=104 Identities=18% Similarity=0.216 Sum_probs=85.9
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcC----CCcEEEEEeCCHHHHHHHHHHHHHcC-----CceEEEEecCCCCCc---
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMK----NTGLIYANEMKASRLKSLTANLHRMG-----VTNTIVCNYDGNELP--- 242 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~----~~g~V~AvDis~~rl~~l~~nl~r~g-----~~nv~v~~~D~~~l~--- 242 (496)
.+.++.+|||+|||+|..+..++..++ +.+.|+++|+++.+++.+++++..+| ..++.++.+|+....
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 477899999999999999999999875 45799999999999999999999998 678999999987643
Q ss_pred -cccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 243 -KVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 243 -~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.. .+.||+|++++++.. ++..+.++| +|||+|+++.
T Consensus 157 ~~~--~~~fD~I~~~~~~~~----------------------------~~~~~~~~L----kpgG~lv~~~ 193 (227)
T 2pbf_A 157 KKE--LGLFDAIHVGASASE----------------------------LPEILVDLL----AENGKLIIPI 193 (227)
T ss_dssp HHH--HCCEEEEEECSBBSS----------------------------CCHHHHHHE----EEEEEEEEEE
T ss_pred Ccc--CCCcCEEEECCchHH----------------------------HHHHHHHhc----CCCcEEEEEE
Confidence 22 268999999987542 134455665 9999998865
No 78
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.36 E-value=5.1e-13 Score=130.56 Aligned_cols=123 Identities=16% Similarity=0.149 Sum_probs=94.7
Q ss_pred ecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCC
Q 011002 163 QSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNEL 241 (496)
Q Consensus 163 Qd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l 241 (496)
+.....+...++...++.+|||+|||+|..++.++..++..+.|+++|+++.+++.+++++.+.|+. +|.++.+|+..+
T Consensus 64 ~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~ 143 (247)
T 1sui_A 64 SADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPV 143 (247)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH
Confidence 3333444444455556789999999999999999999876689999999999999999999999995 599999998764
Q ss_pred cccc-----CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 242 PKVL-----GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 242 ~~~~-----~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
...+ ..+.||+|++|+++. ....++..+.++| +|||+|++..+-
T Consensus 144 l~~l~~~~~~~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~L----kpGG~lv~d~~~ 192 (247)
T 1sui_A 144 LDEMIKDEKNHGSYDFIFVDADKD-------------------------NYLNYHKRLIDLV----KVGGVIGYDNTL 192 (247)
T ss_dssp HHHHHHSGGGTTCBSEEEECSCST-------------------------THHHHHHHHHHHB----CTTCCEEEECTT
T ss_pred HHHHHhccCCCCCEEEEEEcCchH-------------------------HHHHHHHHHHHhC----CCCeEEEEecCC
Confidence 2211 136899999997631 0134577777776 999999987643
No 79
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.35 E-value=4.5e-12 Score=131.54 Aligned_cols=124 Identities=9% Similarity=0.018 Sum_probs=95.5
Q ss_pred hHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc---eEEEEecCCCCCcccc
Q 011002 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT---NTIVCNYDGNELPKVL 245 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~---nv~v~~~D~~~l~~~~ 245 (496)
+....+...++.+|||+|||+|..++.++...+ ...|+++|+|+.+++.+++|+..+|+. ++.+...|+... +
T Consensus 213 ~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~---~ 288 (375)
T 4dcm_A 213 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG---V 288 (375)
T ss_dssp HHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT---C
T ss_pred HHHHhCcccCCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc---C
Confidence 455667777789999999999999999999864 479999999999999999999999976 488899998763 2
Q ss_pred CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 011002 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~ 317 (496)
..+.||+|++|||+.....+.. ....+++..+.++| +|||+|+++..+..+
T Consensus 289 ~~~~fD~Ii~nppfh~~~~~~~-----------------~~~~~~l~~~~~~L----kpgG~l~iv~n~~~~ 339 (375)
T 4dcm_A 289 EPFRFNAVLCNPPFHQQHALTD-----------------NVAWEMFHHARRCL----KINGELYIVANRHLD 339 (375)
T ss_dssp CTTCEEEEEECCCC-------C-----------------CHHHHHHHHHHHHE----EEEEEEEEEEETTSC
T ss_pred CCCCeeEEEECCCcccCcccCH-----------------HHHHHHHHHHHHhC----CCCcEEEEEEECCcC
Confidence 3468999999999743221111 11235788888887 999999997665544
No 80
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.35 E-value=2.1e-12 Score=118.06 Aligned_cols=111 Identities=17% Similarity=0.150 Sum_probs=85.4
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCCCCCCEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
..++.+|||+|||+|..+..++.. +.+.|+|+|+++.+++.+++++..+|+. ++.++.+|+..+.... .+.||+|+
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~fD~i~ 105 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL-TGRFDLVF 105 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB-CSCEEEEE
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh-cCCCCEEE
Confidence 567889999999999999998876 3469999999999999999999999985 6999999987742222 25799999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHH--HhhhhcCCCCcEEEEEeCCCC
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAI--DMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~--~~L~~~lkpGG~LVYSTCSl~ 316 (496)
+|||+.. . ...+++.... ++| +|||+|++++++..
T Consensus 106 ~~~~~~~----------------~-------~~~~~~~~l~~~~~L----~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 106 LDPPYAK----------------E-------TIVATIEALAAKNLL----SEQVMVVCETDKTV 142 (177)
T ss_dssp ECCSSHH----------------H-------HHHHHHHHHHHTTCE----EEEEEEEEEEETTC
T ss_pred ECCCCCc----------------c-------hHHHHHHHHHhCCCc----CCCcEEEEEECCcc
Confidence 9998521 0 0112233333 554 99999999988754
No 81
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.35 E-value=3.2e-12 Score=128.68 Aligned_cols=106 Identities=15% Similarity=0.109 Sum_probs=86.1
Q ss_pred hcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCE
Q 011002 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 173 ~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~ 252 (496)
++.+++|++|||+|||+|+.|..+++... .+.|+|+|+|+.+++.+++++.+.|+.++.++++|+..++ .+.||+
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~----d~~FDv 191 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID----GLEFDV 191 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG----GCCCSE
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC----CCCcCE
Confidence 46788999999999999988765544433 4799999999999999999999999988999999998875 278999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
|+++.- + + ...+++..+.+.| +|||+|++.+
T Consensus 192 V~~~a~-----~----~----------------d~~~~l~el~r~L----kPGG~Lvv~~ 222 (298)
T 3fpf_A 192 LMVAAL-----A----E----------------PKRRVFRNIHRYV----DTETRIIYRT 222 (298)
T ss_dssp EEECTT-----C----S----------------CHHHHHHHHHHHC----CTTCEEEEEE
T ss_pred EEECCC-----c----c----------------CHHHHHHHHHHHc----CCCcEEEEEc
Confidence 998542 0 0 1234677788876 9999999865
No 82
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.35 E-value=2.9e-13 Score=127.74 Aligned_cols=117 Identities=9% Similarity=0.060 Sum_probs=91.1
Q ss_pred hHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCC
Q 011002 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGL 247 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~ 247 (496)
+...++...++.+|||+|||+|..+..++..++..+.|+++|+++.+++.+++++...|+.+ +.++.+|+..+.... .
T Consensus 47 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~ 125 (210)
T 3c3p_A 47 LLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQ-R 125 (210)
T ss_dssp HHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTC-C
T ss_pred HHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccC-C
Confidence 33333333467899999999999999999987656899999999999999999999999864 999999987642222 2
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
+ ||+|++|+++.. +..++..+.++| +|||+|++.++.+.
T Consensus 126 ~-fD~v~~~~~~~~-------------------------~~~~l~~~~~~L----kpgG~lv~~~~~~~ 164 (210)
T 3c3p_A 126 D-IDILFMDCDVFN-------------------------GADVLERMNRCL----AKNALLIAVNALRR 164 (210)
T ss_dssp S-EEEEEEETTTSC-------------------------HHHHHHHHGGGE----EEEEEEEEESSSSC
T ss_pred C-CCEEEEcCChhh-------------------------hHHHHHHHHHhc----CCCeEEEEECcccc
Confidence 5 999999965311 234577777776 99999999887653
No 83
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.35 E-value=2.1e-12 Score=118.40 Aligned_cols=114 Identities=17% Similarity=0.141 Sum_probs=84.7
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCcccc--CCCCCCE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVL--GLNTVDR 252 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~--~~~~FD~ 252 (496)
..++.+|||+|||+|..+..++.. +...|+++|+++.+++.++.|+..+++ .++.++++|+..+.... ..+.||+
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~ 119 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDL 119 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred hcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCE
Confidence 357899999999999999988773 346899999999999999999999998 46999999987643211 1368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
|++|||+. .+ ....+ .. .+ .+.++| +|||+|++++|+..
T Consensus 120 i~~~~~~~-~~------------~~~~~------~~-~l-~~~~~L----~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 120 VLLDPPYA-KQ------------EIVSQ------LE-KM-LERQLL----TNEAVIVCETDKTV 158 (187)
T ss_dssp EEECCCGG-GC------------CHHHH------HH-HH-HHTTCE----EEEEEEEEEEETTC
T ss_pred EEECCCCC-ch------------hHHHH------HH-HH-HHhccc----CCCCEEEEEeCCcc
Confidence 99999943 11 01111 01 11 124444 99999999998864
No 84
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.35 E-value=6.5e-12 Score=125.96 Aligned_cols=117 Identities=11% Similarity=0.074 Sum_probs=93.4
Q ss_pred HHHhcC-CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCC
Q 011002 170 PVMALA-PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGL 247 (496)
Q Consensus 170 ~v~~L~-~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~ 247 (496)
+...+. +.++.+|||+|||+|..+..++... ...|+++|+++.+++.+++++...|+. ++.++.+|+..++ +..
T Consensus 108 l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~ 183 (312)
T 3vc1_A 108 LMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP--FDK 183 (312)
T ss_dssp HHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--CCT
T ss_pred HHHHhccCCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC--CCC
Confidence 445555 7889999999999999999999876 268999999999999999999999986 6999999998876 334
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~ 317 (496)
+.||+|++.- ++. ... +..+|..+.++| +|||+|++++.....
T Consensus 184 ~~fD~V~~~~------~l~-------~~~----------~~~~l~~~~~~L----kpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 184 GAVTASWNNE------STM-------YVD----------LHDLFSEHSRFL----KVGGRYVTITGCWNP 226 (312)
T ss_dssp TCEEEEEEES------CGG-------GSC----------HHHHHHHHHHHE----EEEEEEEEEEEEECT
T ss_pred CCEeEEEECC------chh-------hCC----------HHHHHHHHHHHc----CCCcEEEEEEccccc
Confidence 7899999731 110 011 355788888887 999999998865433
No 85
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.34 E-value=3.9e-12 Score=128.42 Aligned_cols=113 Identities=16% Similarity=0.215 Sum_probs=91.8
Q ss_pred hhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCC
Q 011002 168 FLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGL 247 (496)
Q Consensus 168 ~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~ 247 (496)
..+...+.+.+|.+|||+|||+|..+..++......+.|+++|+++.+++.+++++...|+.++.+..+|+...+.. .
T Consensus 65 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~--~ 142 (317)
T 1dl5_A 65 ALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE--F 142 (317)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG--G
T ss_pred HHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc--C
Confidence 34455678889999999999999999999998764578999999999999999999999998999999999875432 2
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
+.||+|++++++...+ ..+.+.| +|||+|+++..+
T Consensus 143 ~~fD~Iv~~~~~~~~~----------------------------~~~~~~L----kpgG~lvi~~~~ 177 (317)
T 1dl5_A 143 SPYDVIFVTVGVDEVP----------------------------ETWFTQL----KEGGRVIVPINL 177 (317)
T ss_dssp CCEEEEEECSBBSCCC----------------------------HHHHHHE----EEEEEEEEEBCB
T ss_pred CCeEEEEEcCCHHHHH----------------------------HHHHHhc----CCCcEEEEEECC
Confidence 6899999998864332 1234455 999999988543
No 86
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.34 E-value=1e-11 Score=120.37 Aligned_cols=127 Identities=12% Similarity=0.124 Sum_probs=99.3
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
+.+|.+|||+|||+|..++.++... +.+.|+|+|+++.+++.+++|++++|+.+ |.+..+|+...... ...||.|+
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~--~~~~D~Iv 89 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE--TDQVSVIT 89 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--GGCCCEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc--CcCCCEEE
Confidence 4578999999999999999998864 34789999999999999999999999975 99999998542111 12699998
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcE
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVK 334 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~~ 334 (496)
+ .|.| ..+-.+||..+...| ++||+||++.. .....|..+|..++|.
T Consensus 90 i----aG~G--------------------g~~i~~Il~~~~~~L----~~~~~lVlq~~-----~~~~~vr~~L~~~Gf~ 136 (225)
T 3kr9_A 90 I----AGMG--------------------GRLIARILEEGLGKL----ANVERLILQPN-----NREDDLRIWLQDHGFQ 136 (225)
T ss_dssp E----EEEC--------------------HHHHHHHHHHTGGGC----TTCCEEEEEES-----SCHHHHHHHHHHTTEE
T ss_pred E----cCCC--------------------hHHHHHHHHHHHHHh----CCCCEEEEECC-----CCHHHHHHHHHHCCCE
Confidence 6 2333 122355777777776 99999999665 3778888888888888
Q ss_pred Eeec
Q 011002 335 LVPC 338 (496)
Q Consensus 335 lv~~ 338 (496)
++.-
T Consensus 137 i~~e 140 (225)
T 3kr9_A 137 IVAE 140 (225)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7653
No 87
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.34 E-value=2.7e-12 Score=124.55 Aligned_cols=123 Identities=16% Similarity=0.109 Sum_probs=90.9
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHc---CCce---------------------
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRM---GVTN--------------------- 230 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~-~~~g~V~AvDis~~rl~~l~~nl~r~---g~~n--------------------- 230 (496)
..++.+|||+|||+|..+..++..+ .....|+|+|+|+.+++.++.|+... |+.+
T Consensus 49 ~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (250)
T 1o9g_A 49 GDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAA 128 (250)
T ss_dssp CCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred cCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhh
Confidence 3467899999999999999999873 12368999999999999999999877 6543
Q ss_pred -----EE-------------EEecCCCCCccc---cCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHH
Q 011002 231 -----TI-------------VCNYDGNELPKV---LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQ 289 (496)
Q Consensus 231 -----v~-------------v~~~D~~~l~~~---~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~ 289 (496)
+. +.++|....... .....||+|++|||+.....+... .....+..
T Consensus 129 ~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~-------------~~~~~~~~ 195 (250)
T 1o9g_A 129 QAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQ-------------VPGQPVAG 195 (250)
T ss_dssp HHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSC-------------CCHHHHHH
T ss_pred hhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeecccccccc-------------ccccHHHH
Confidence 56 888998764310 022489999999997654322110 11234466
Q ss_pred HHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 290 LILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 290 LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
++..+.++| +|||+|+++.++.
T Consensus 196 ~l~~~~~~L----kpgG~l~~~~~~~ 217 (250)
T 1o9g_A 196 LLRSLASAL----PAHAVIAVTDRSR 217 (250)
T ss_dssp HHHHHHHHS----CTTCEEEEEESSS
T ss_pred HHHHHHHhc----CCCcEEEEeCcch
Confidence 788888886 9999999976664
No 88
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.34 E-value=8.6e-12 Score=120.32 Aligned_cols=115 Identities=11% Similarity=-0.008 Sum_probs=90.6
Q ss_pred HHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCCC
Q 011002 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~~ 248 (496)
+...+.+.++.+|||+|||+|..+..++...+ ..|+++|+++.+++.+++++...|+. ++.+..+|+..++. .+
T Consensus 28 l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~ 102 (256)
T 1nkv_A 28 LGRVLRMKPGTRILDLGSGSGEMLCTWARDHG--ITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA---NE 102 (256)
T ss_dssp HHHHTCCCTTCEEEEETCTTCHHHHHHHHHTC--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC---SS
T ss_pred HHHhcCCCCCCEEEEECCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc---CC
Confidence 34556778999999999999999999998862 58999999999999999999999985 79999999988764 37
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
.||+|++.. ++..-++ ...+|..+.++| +|||+|++++..+
T Consensus 103 ~fD~V~~~~------~~~~~~~----------------~~~~l~~~~r~L----kpgG~l~~~~~~~ 143 (256)
T 1nkv_A 103 KCDVAACVG------ATWIAGG----------------FAGAEELLAQSL----KPGGIMLIGEPYW 143 (256)
T ss_dssp CEEEEEEES------CGGGTSS----------------SHHHHHHHTTSE----EEEEEEEEEEEEE
T ss_pred CCCEEEECC------ChHhcCC----------------HHHHHHHHHHHc----CCCeEEEEecCcc
Confidence 899999721 1111000 134577777776 9999999987654
No 89
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.33 E-value=8.4e-13 Score=126.72 Aligned_cols=118 Identities=19% Similarity=0.145 Sum_probs=89.6
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCC-ccccCCCCCCEEEE
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL-PKVLGLNTVDRVLL 255 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l-~~~~~~~~FD~VLl 255 (496)
.++.+|||+|||+|..+..+|...++ ..|+|+|+++.+++.+++++...|+.|+.++.+|+..+ +..++.+.||.|++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~-~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPE-QDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTT-SEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCC-CeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEE
Confidence 36789999999999999999998654 78999999999999999999999999999999998874 32344589999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTC 313 (496)
.-|.. +.+....+.+. .|..++..+.++| +|||+|+++|-
T Consensus 112 ~~~~p----~~~~~~~~rr~----------~~~~~l~~~~r~L----kpGG~l~i~td 151 (218)
T 3dxy_A 112 FFPDP----WHKARHNKRRI----------VQVPFAELVKSKL----QLGGVFHMATD 151 (218)
T ss_dssp ESCCC----CCSGGGGGGSS----------CSHHHHHHHHHHE----EEEEEEEEEES
T ss_pred eCCCC----ccchhhhhhhh----------hhHHHHHHHHHHc----CCCcEEEEEeC
Confidence 73311 00111111111 1234677888877 99999998874
No 90
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.32 E-value=1.3e-12 Score=133.35 Aligned_cols=145 Identities=15% Similarity=0.153 Sum_probs=101.0
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCC----cEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCC
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNT----GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~----g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~F 250 (496)
.+.++.+|||+|||+|+.++.++..+... ..|+|+|+++.+++.++.|+...|+ ++.++++|..... ....|
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~---~~~~f 202 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANL---LVDPV 202 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCC---CCCCE
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCcc---ccCCc
Confidence 56678999999999999999999887543 6899999999999999999999998 6888999986532 23689
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC-CCCCcCCHHHHHHHHH
Q 011002 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC-SIMVTENEAVIDYALK 329 (496)
Q Consensus 251 D~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTC-Sl~~eENE~vV~~~L~ 329 (496)
|+|++|||+. .+.. ++....+...........+..++.++++.| +|||++++.++ ++........+...|.
T Consensus 203 D~Ii~NPPfg---~~~~-~~~~~~~~~~~~~g~~~~~~~~l~~~~~~L----k~gG~~~~v~p~~~~~~~~~~~ir~~l~ 274 (344)
T 2f8l_A 203 DVVISDLPVG---YYPD-DENAKTFELCREEGHSFAHFLFIEQGMRYT----KPGGYLFFLVPDAMFGTSDFAKVDKFIK 274 (344)
T ss_dssp EEEEEECCCS---EESC-HHHHTTSTTCCSSSCEEHHHHHHHHHHHTE----EEEEEEEEEEEGGGGGSTTHHHHHHHHH
T ss_pred cEEEECCCCC---CcCc-hhhhhhccccCCCCcchHHHHHHHHHHHHh----CCCCEEEEEECchhcCCchHHHHHHHHH
Confidence 9999999973 3321 111100100000001123456788899987 99999988873 3444445555554444
Q ss_pred hC
Q 011002 330 KR 331 (496)
Q Consensus 330 ~~ 331 (496)
+.
T Consensus 275 ~~ 276 (344)
T 2f8l_A 275 KN 276 (344)
T ss_dssp HH
T ss_pred hC
Confidence 43
No 91
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.32 E-value=2.3e-12 Score=117.73 Aligned_cols=129 Identities=19% Similarity=0.286 Sum_probs=98.7
Q ss_pred hhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccccC
Q 011002 168 FLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLG 246 (496)
Q Consensus 168 ~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~~ 246 (496)
.+....+.+.++.+|||+|||+|..+..++... +.|+++|+++.+++.+++++..+|+ .++.+.++|+......
T Consensus 23 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-- 97 (192)
T 1l3i_A 23 CLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK-- 97 (192)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT--
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc--
Confidence 344555678889999999999999999888764 6899999999999999999999998 6799999987652111
Q ss_pred CCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHH
Q 011002 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (496)
Q Consensus 247 ~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~ 326 (496)
.+.||+|+++.+.. + ...++..+.++| +|||+|++++|+. ++...+..
T Consensus 98 ~~~~D~v~~~~~~~------------------~-------~~~~l~~~~~~l----~~gG~l~~~~~~~---~~~~~~~~ 145 (192)
T 1l3i_A 98 IPDIDIAVVGGSGG------------------E-------LQEILRIIKDKL----KPGGRIIVTAILL---ETKFEAME 145 (192)
T ss_dssp SCCEEEEEESCCTT------------------C-------HHHHHHHHHHTE----EEEEEEEEEECBH---HHHHHHHH
T ss_pred CCCCCEEEECCchH------------------H-------HHHHHHHHHHhc----CCCcEEEEEecCc---chHHHHHH
Confidence 15799999986531 0 134677777876 9999999998864 33344455
Q ss_pred HHHhCCc
Q 011002 327 ALKKRDV 333 (496)
Q Consensus 327 ~L~~~~~ 333 (496)
++++.++
T Consensus 146 ~l~~~g~ 152 (192)
T 1l3i_A 146 CLRDLGF 152 (192)
T ss_dssp HHHHTTC
T ss_pred HHHHCCC
Confidence 5666654
No 92
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.32 E-value=8.1e-13 Score=132.92 Aligned_cols=130 Identities=16% Similarity=0.097 Sum_probs=95.3
Q ss_pred eEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC
Q 011002 159 FYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG 238 (496)
Q Consensus 159 ~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~ 238 (496)
+|..+......++..+.+.++.+|||+|||+|..|..++.. .+.|+|+|+++.+++.+++++...|+.++.++++|+
T Consensus 23 ~fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~ 99 (299)
T 2h1r_A 23 HLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDA 99 (299)
T ss_dssp CEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----C
T ss_pred ceecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECch
Confidence 45555555556677788889999999999999999988875 368999999999999999999988888899999999
Q ss_pred CCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHH-----------HHHHHHHHHHHhhhhcCCCCcE
Q 011002 239 NELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSY-----------LQKQLILAAIDMVDANSKSGGY 307 (496)
Q Consensus 239 ~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~-----------lQ~~LL~~A~~~L~~~lkpGG~ 307 (496)
..++. ..||+|++|+|+..+. ..+..+.. .|+ ..+.+++ +++|.
T Consensus 100 ~~~~~----~~~D~Vv~n~py~~~~--------------~~~~~ll~~~~~~~~~~l~~Q~---e~a~rll----a~~G~ 154 (299)
T 2h1r_A 100 IKTVF----PKFDVCTANIPYKISS--------------PLIFKLISHRPLFKCAVLMFQK---EFAERML----ANVGD 154 (299)
T ss_dssp CSSCC----CCCSEEEEECCGGGHH--------------HHHHHHHHCSSCCSEEEEEEEH---HHHHHHT----CCTTS
T ss_pred hhCCc----ccCCEEEEcCCccccc--------------HHHHHHHhcCCccceeeehHHH---HHHHHHh----cCCCC
Confidence 87752 5799999999975331 11111110 011 3455665 89999
Q ss_pred EEEEeCCCC
Q 011002 308 IVYSTCSIM 316 (496)
Q Consensus 308 LVYSTCSl~ 316 (496)
..|+|||+.
T Consensus 155 ~~y~~ls~~ 163 (299)
T 2h1r_A 155 SNYSRLTIN 163 (299)
T ss_dssp TTCCHHHHH
T ss_pred cchhHHHHH
Confidence 999998863
No 93
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.32 E-value=7.7e-12 Score=119.95 Aligned_cols=109 Identities=22% Similarity=0.307 Sum_probs=85.8
Q ss_pred cCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc-ccCCCCCCE
Q 011002 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK-VLGLNTVDR 252 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~-~~~~~~FD~ 252 (496)
+.+.++.+|||+|||+|..+.+++...++.+.|+|+|+++.+++.+.+++... .++.++.+|+..... ....+.||+
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~~D~ 150 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYRMLIAMVDV 150 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGGGGCCCEEE
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhcccCCcEEE
Confidence 34678999999999999999999998865679999999999999998888876 679999999987421 112368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
|++|+| .|+ ....++..+.++| +|||+|+.+.
T Consensus 151 V~~~~~---------~~~---------------~~~~~~~~~~~~L----kpgG~l~i~~ 182 (233)
T 2ipx_A 151 IFADVA---------QPD---------------QTRIVALNAHTFL----RNGGHFVISI 182 (233)
T ss_dssp EEECCC---------CTT---------------HHHHHHHHHHHHE----EEEEEEEEEE
T ss_pred EEEcCC---------Ccc---------------HHHHHHHHHHHHc----CCCeEEEEEE
Confidence 999987 110 1133566677876 9999999854
No 94
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.31 E-value=1.2e-11 Score=115.03 Aligned_cols=126 Identities=17% Similarity=0.163 Sum_probs=90.2
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc-----------
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----------- 243 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~----------- 243 (496)
+.++.+|||+|||||+.+.+++..+++ .+.|+|+|+++.. ...++.++++|+..++.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC--------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhcccccccc
Confidence 467899999999999999999998863 5899999999831 34578889999887640
Q ss_pred ------------ccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 244 ------------VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 244 ------------~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
.+....||+|++|+++...|.. ..+......++..+|..+.++| +|||.|+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~-----------~~d~~~~~~~~~~~l~~~~~~L----kpgG~lv~~ 153 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNK-----------IDDHLNSCELTLSITHFMEQYI----NIGGTYIVK 153 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHE----EEEEEEEEE
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCc-----------ccCHHHHHHHHHHHHHHHHHHc----cCCCEEEEE
Confidence 0234689999999875544421 1222233445667888888887 999999986
Q ss_pred eCCCCCcCCHHHHHHHHHh
Q 011002 312 TCSIMVTENEAVIDYALKK 330 (496)
Q Consensus 312 TCSl~~eENE~vV~~~L~~ 330 (496)
+.. .++...+...+..
T Consensus 154 ~~~---~~~~~~l~~~l~~ 169 (201)
T 2plw_A 154 MYL---GSQTNNLKTYLKG 169 (201)
T ss_dssp EEC---STTHHHHHHHHHT
T ss_pred EeC---CCCHHHHHHHHHH
Confidence 543 3455555555654
No 95
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.31 E-value=4.2e-12 Score=121.29 Aligned_cols=111 Identities=18% Similarity=0.198 Sum_probs=87.1
Q ss_pred HHHhc--CCCCCCeEeecccCCcHHHHHHHHHcCC-----CcEEEEEeCCHHHHHHHHHHHHHcC-----CceEEEEecC
Q 011002 170 PVMAL--APQEKERVIDMAAAPGGKTTYIAALMKN-----TGLIYANEMKASRLKSLTANLHRMG-----VTNTIVCNYD 237 (496)
Q Consensus 170 ~v~~L--~~~~g~~VLDlcAGpGgktl~lA~l~~~-----~g~V~AvDis~~rl~~l~~nl~r~g-----~~nv~v~~~D 237 (496)
...+| .+.++.+|||+|||+|..+..++..++. .+.|+++|+++.+++.+++++..+| ..++.+..+|
T Consensus 74 ~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 153 (227)
T 1r18_A 74 ALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD 153 (227)
T ss_dssp HHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC
T ss_pred HHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECC
Confidence 34445 4778999999999999999999997753 3689999999999999999999887 6789999999
Q ss_pred CCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 238 GNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 238 ~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
+...... .+.||+|++++++... +..+.+.| +|||+|+.+...
T Consensus 154 ~~~~~~~--~~~fD~I~~~~~~~~~----------------------------~~~~~~~L----kpgG~lvi~~~~ 196 (227)
T 1r18_A 154 GRKGYPP--NAPYNAIHVGAAAPDT----------------------------PTELINQL----ASGGRLIVPVGP 196 (227)
T ss_dssp GGGCCGG--GCSEEEEEECSCBSSC----------------------------CHHHHHTE----EEEEEEEEEESC
T ss_pred cccCCCc--CCCccEEEECCchHHH----------------------------HHHHHHHh----cCCCEEEEEEec
Confidence 8762211 2679999998875321 23455665 999999987643
No 96
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.31 E-value=2.1e-11 Score=118.50 Aligned_cols=127 Identities=17% Similarity=0.203 Sum_probs=100.7
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
+.+|.+|||+|||+|..++.++... ..+.|+|+|+++..++.+++|++++|+.+ |.+..+|+...... ...||+|+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~--~~~~D~Iv 95 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE--ADNIDTIT 95 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--GGCCCEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc--ccccCEEE
Confidence 4678999999999999999998863 34689999999999999999999999976 99999998765432 13799987
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcE
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVK 334 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~~ 334 (496)
+ .|.| ..+-.+||..+...| +++|+||.+.- .+.+.|..+|..++|.
T Consensus 96 i----aGmG--------------------g~lI~~IL~~~~~~l----~~~~~lIlqp~-----~~~~~lr~~L~~~Gf~ 142 (230)
T 3lec_A 96 I----CGMG--------------------GRLIADILNNDIDKL----QHVKTLVLQPN-----NREDDLRKWLAANDFE 142 (230)
T ss_dssp E----EEEC--------------------HHHHHHHHHHTGGGG----TTCCEEEEEES-----SCHHHHHHHHHHTTEE
T ss_pred E----eCCc--------------------hHHHHHHHHHHHHHh----CcCCEEEEECC-----CChHHHHHHHHHCCCE
Confidence 6 2333 123355677777766 99999998773 3588888888888888
Q ss_pred Eeec
Q 011002 335 LVPC 338 (496)
Q Consensus 335 lv~~ 338 (496)
++.-
T Consensus 143 i~~E 146 (230)
T 3lec_A 143 IVAE 146 (230)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 97
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.31 E-value=3.1e-12 Score=124.08 Aligned_cols=117 Identities=16% Similarity=0.245 Sum_probs=88.3
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--------CCceEEEEecCCCC-CccccCC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--------GVTNTIVCNYDGNE-LPKVLGL 247 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~--------g~~nv~v~~~D~~~-l~~~~~~ 247 (496)
.++.+|||+|||+|+.++.++...+ .+.|+|+|+++.+++.+++++..+ |+.|+.++.+|+.. ++..+..
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 4688999999999999999999864 468999999999999999999987 88899999999987 4544445
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
+.||.|++.-|..-. +. ......+ .+..++..+.++| +|||+|+++|
T Consensus 127 ~~~d~v~~~~p~p~~---------k~---~~~~~r~--~~~~~l~~~~~~L----kpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHF---------KQ---RKHKARI--ITNTLLSEYAYVL----KEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEESCCCC------------------CSSC--CCHHHHHHHHHHE----EEEEEEEEEE
T ss_pred cccCEEEEECCCccc---------cc---chhHHhh--ccHHHHHHHHHHc----CCCCEEEEEe
Confidence 789999876543211 00 0000000 1346788888887 9999999865
No 98
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.31 E-value=6.8e-12 Score=123.85 Aligned_cols=113 Identities=14% Similarity=0.142 Sum_probs=88.5
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCCCCCCEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~-g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~~~FD~V 253 (496)
+++|.+|||+|||+|..+..|+..+... ..|+|+|+|+.+++.+++++...+.. +|.++++|+.+++. +.||+|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~----~~~d~v 143 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI----ENASMV 143 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC----CSEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc----cccccc
Confidence 4689999999999999999999987543 48999999999999999999998875 69999999988763 579999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
++.- ++ ......+ ...+|..+.+.| +|||+|+.+.-...
T Consensus 144 ~~~~------~l-------~~~~~~~-------~~~~l~~i~~~L----kpGG~lii~e~~~~ 182 (261)
T 4gek_A 144 VLNF------TL-------QFLEPSE-------RQALLDKIYQGL----NPGGALVLSEKFSF 182 (261)
T ss_dssp EEES------CG-------GGSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEEBCC
T ss_pred eeee------ee-------eecCchh-------HhHHHHHHHHHc----CCCcEEEEEeccCC
Confidence 8731 11 0011111 234688888887 99999999875543
No 99
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.31 E-value=1.1e-11 Score=118.07 Aligned_cols=108 Identities=19% Similarity=0.212 Sum_probs=85.7
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc-cCCCCCCEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~-~~~~~FD~VL 254 (496)
+.++.+|||+|||+|..+..++..+++.+.|+++|+++.+++.+.+++..+ .++.++.+|+...... ...+.||+|+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYRALVPKVDVIF 148 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhhcccCCceEEE
Confidence 678999999999999999999998765689999999999999999998776 6899999999874211 1125799999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTC 313 (496)
+|+|. ++ ....++..+.++| +|||+|+++.+
T Consensus 149 ~~~~~---------~~---------------~~~~~l~~~~~~L----kpgG~l~~~~~ 179 (227)
T 1g8a_A 149 EDVAQ---------PT---------------QAKILIDNAEVYL----KRGGYGMIAVK 179 (227)
T ss_dssp ECCCS---------TT---------------HHHHHHHHHHHHE----EEEEEEEEEEE
T ss_pred ECCCC---------Hh---------------HHHHHHHHHHHhc----CCCCEEEEEEe
Confidence 99871 10 1123477788887 99999998743
No 100
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.30 E-value=8.6e-12 Score=126.59 Aligned_cols=114 Identities=14% Similarity=0.146 Sum_probs=88.1
Q ss_pred hhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcC-----------CceEEEEec
Q 011002 168 FLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG-----------VTNTIVCNY 236 (496)
Q Consensus 168 ~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g-----------~~nv~v~~~ 236 (496)
...+..+.+.+|.+|||+|||+|..+..++..+++.+.|+++|+++.+++.+++|+..+| ..++.+..+
T Consensus 95 ~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~ 174 (336)
T 2b25_A 95 NMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK 174 (336)
T ss_dssp HHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence 344556788899999999999999999999987666899999999999999999999754 357999999
Q ss_pred CCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 237 DGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 237 D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
|+..+...+..+.||+|++|+|... .++..+.++| +|||+|+..+
T Consensus 175 d~~~~~~~~~~~~fD~V~~~~~~~~---------------------------~~l~~~~~~L----kpgG~lv~~~ 219 (336)
T 2b25_A 175 DISGATEDIKSLTFDAVALDMLNPH---------------------------VTLPVFYPHL----KHGGVCAVYV 219 (336)
T ss_dssp CTTCCC-------EEEEEECSSSTT---------------------------TTHHHHGGGE----EEEEEEEEEE
T ss_pred ChHHcccccCCCCeeEEEECCCCHH---------------------------HHHHHHHHhc----CCCcEEEEEe
Confidence 9987643233467999999987311 0366677776 9999998654
No 101
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.30 E-value=3.7e-11 Score=119.63 Aligned_cols=123 Identities=11% Similarity=0.071 Sum_probs=92.9
Q ss_pred HHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCCC
Q 011002 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~~ 248 (496)
+...+.+.+|.+|||+|||+|..+..++...+ ..|+++|+|+.+++.+++++...|+. ++.+..+|+..+ .+
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~ 136 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-----DE 136 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-----CC
T ss_pred HHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-----CC
Confidence 34556778999999999999999999999864 68999999999999999999999987 699999999776 27
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
.||+|++.. ++..-|+........ ....+|..+.++| +|||+|+..+++..
T Consensus 137 ~fD~v~~~~------~~~~~~d~~~~~~~~-------~~~~~l~~~~~~L----kpgG~l~i~~~~~~ 187 (302)
T 3hem_A 137 PVDRIVSLG------AFEHFADGAGDAGFE-------RYDTFFKKFYNLT----PDDGRMLLHTITIP 187 (302)
T ss_dssp CCSEEEEES------CGGGTTCCSSCCCTT-------HHHHHHHHHHHSS----CTTCEEEEEEEECC
T ss_pred CccEEEEcc------hHHhcCccccccchh-------HHHHHHHHHHHhc----CCCcEEEEEEEecc
Confidence 899999842 221111100000001 1234677777776 99999999988754
No 102
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.30 E-value=3.2e-11 Score=113.87 Aligned_cols=117 Identities=15% Similarity=0.080 Sum_probs=87.7
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-----eEEEEecCCCCCcccc
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-----NTIVCNYDGNELPKVL 245 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-----nv~v~~~D~~~l~~~~ 245 (496)
...+...++.+|||+|||+|..+..++...+ ...|+++|+++.+++.+++++...++. ++.++.+|+...+..
T Consensus 22 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 99 (217)
T 3jwh_A 22 VAALKQSNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKR- 99 (217)
T ss_dssp HHHHHHTTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGG-
T ss_pred HHHHHhcCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccccc-
Confidence 3445556789999999999999999988643 369999999999999999999988876 699999998665533
Q ss_pred CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
.+.||+|++.-. +. ..... ....+|..+.++| +|||.|+.+.+.
T Consensus 100 -~~~fD~v~~~~~------l~-------~~~~~-------~~~~~l~~~~~~L----kpgG~li~~~~~ 143 (217)
T 3jwh_A 100 -FHGYDAATVIEV------IE-------HLDLS-------RLGAFERVLFEFA----QPKIVIVTTPNI 143 (217)
T ss_dssp -GCSCSEEEEESC------GG-------GCCHH-------HHHHHHHHHHTTT----CCSEEEEEEEBH
T ss_pred -CCCcCEEeeHHH------HH-------cCCHH-------HHHHHHHHHHHHc----CCCEEEEEccCc
Confidence 268999997421 11 11111 1245677777776 999988877664
No 103
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.29 E-value=1.4e-11 Score=118.15 Aligned_cols=104 Identities=21% Similarity=0.301 Sum_probs=83.8
Q ss_pred cCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCC----CccccCCCC
Q 011002 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNE----LPKVLGLNT 249 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~----l~~~~~~~~ 249 (496)
+.+.++.+|||+|||+|..+.+++...+ .+.|+|+|+++.+++.+++++... .|+.++.+|+.. ++ +. +.
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~--~~-~~ 143 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYAN--IV-EK 143 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGTT--TS-CC
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccccc--cC-cc
Confidence 3466899999999999999999999876 589999999999999999998765 689999999987 33 22 68
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
||+|+.|+|.. + ....+|..+.++| +|||+|+.+
T Consensus 144 ~D~v~~~~~~~---------~---------------~~~~~l~~~~~~L----kpgG~l~i~ 177 (230)
T 1fbn_A 144 VDVIYEDVAQP---------N---------------QAEILIKNAKWFL----KKGGYGMIA 177 (230)
T ss_dssp EEEEEECCCST---------T---------------HHHHHHHHHHHHE----EEEEEEEEE
T ss_pred EEEEEEecCCh---------h---------------HHHHHHHHHHHhC----CCCcEEEEE
Confidence 99999886511 0 1133577777776 999999886
No 104
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.29 E-value=1.2e-11 Score=128.80 Aligned_cols=114 Identities=16% Similarity=0.191 Sum_probs=93.1
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.++.+|||+|||+|..+..++.. ...|+++|+|+.+++.+++|+..+++. +.++.+|+..++.. .+.||+|++|
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~~~~~~--~~~fD~Ii~n 305 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSDVDEALTE--EARFDIIVTN 305 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTSCT--TCCEEEEEEC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchhhcccc--CCCeEEEEEC
Confidence 47889999999999999999886 359999999999999999999999986 78899999877532 3789999999
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~ 317 (496)
||+...+... ......++..+.++| +|||+|+++++...+
T Consensus 306 pp~~~~~~~~-----------------~~~~~~~l~~~~~~L----kpGG~l~iv~n~~l~ 345 (381)
T 3dmg_A 306 PPFHVGGAVI-----------------LDVAQAFVNVAAARL----RPGGVFFLVSNPFLK 345 (381)
T ss_dssp CCCCTTCSSC-----------------CHHHHHHHHHHHHHE----EEEEEEEEEECTTSC
T ss_pred Cchhhccccc-----------------HHHHHHHHHHHHHhc----CcCcEEEEEEcCCCC
Confidence 9986433211 122346788888887 999999999887653
No 105
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.29 E-value=2.5e-11 Score=119.00 Aligned_cols=127 Identities=11% Similarity=0.145 Sum_probs=100.1
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
+.+|.+|||+|||+|..++.++... ..+.|+|+|+++..++.+++|++++|+.+ |.+..+|+...... ...||.|+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~--~~~~D~Iv 95 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK--KDAIDTIV 95 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--GGCCCEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc--cccccEEE
Confidence 5678999999999999999998863 34689999999999999999999999976 99999998765422 13599988
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcE
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVK 334 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~~ 334 (496)
+ .|.| ..+-.+||..+...| +++|+||.+.- .+...|..+|...+|.
T Consensus 96 i----agmG--------------------g~lI~~IL~~~~~~L----~~~~~lIlq~~-----~~~~~lr~~L~~~Gf~ 142 (244)
T 3gnl_A 96 I----AGMG--------------------GTLIRTILEEGAAKL----AGVTKLILQPN-----IAAWQLREWSEQNNWL 142 (244)
T ss_dssp E----EEEC--------------------HHHHHHHHHHTGGGG----TTCCEEEEEES-----SCHHHHHHHHHHHTEE
T ss_pred E----eCCc--------------------hHHHHHHHHHHHHHh----CCCCEEEEEcC-----CChHHHHHHHHHCCCE
Confidence 6 2333 123355778777776 89999998763 3678888888888888
Q ss_pred Eeec
Q 011002 335 LVPC 338 (496)
Q Consensus 335 lv~~ 338 (496)
++.-
T Consensus 143 i~~E 146 (244)
T 3gnl_A 143 ITSE 146 (244)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7653
No 106
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.29 E-value=1.4e-11 Score=111.85 Aligned_cols=126 Identities=18% Similarity=0.260 Sum_probs=94.5
Q ss_pred hHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCC
Q 011002 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~ 248 (496)
.+...+.+.++.+|||+|||+|..+..++. ....|+++|+++.+++.+++++..+|+.++.++.+|+.. + ++.+
T Consensus 26 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~--~~~~ 99 (183)
T 2yxd_A 26 VSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-V--LDKL 99 (183)
T ss_dssp HHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-H--GGGC
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-c--ccCC
Confidence 445556778899999999999999999887 347999999999999999999999999889999999876 2 2226
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHH
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYAL 328 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L 328 (496)
.||+|++++| . + ...++..+.+ + |||+|++++|+. ++-..+...+
T Consensus 100 ~~D~i~~~~~----~----~------------------~~~~l~~~~~-----~-~gG~l~~~~~~~---~~~~~~~~~l 144 (183)
T 2yxd_A 100 EFNKAFIGGT----K----N------------------IEKIIEILDK-----K-KINHIVANTIVL---ENAAKIINEF 144 (183)
T ss_dssp CCSEEEECSC----S----C------------------HHHHHHHHHH-----T-TCCEEEEEESCH---HHHHHHHHHH
T ss_pred CCcEEEECCc----c----c------------------HHHHHHHHhh-----C-CCCEEEEEeccc---ccHHHHHHHH
Confidence 8999999876 0 0 1233444444 2 999999998764 2233344555
Q ss_pred HhCCcEE
Q 011002 329 KKRDVKL 335 (496)
Q Consensus 329 ~~~~~~l 335 (496)
++.++.+
T Consensus 145 ~~~g~~~ 151 (183)
T 2yxd_A 145 ESRGYNV 151 (183)
T ss_dssp HHTTCEE
T ss_pred HHcCCeE
Confidence 6665544
No 107
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.29 E-value=5.4e-12 Score=117.94 Aligned_cols=114 Identities=14% Similarity=0.080 Sum_probs=89.2
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCCCC
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~~~ 249 (496)
...+.+.++ +|||+|||+|..+..++.. ....|+++|+++.+++.++.++...|+. ++.+..+|+..++ +..+.
T Consensus 37 ~~~~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 111 (219)
T 3dlc_A 37 INRFGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP--IEDNY 111 (219)
T ss_dssp HHHHCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS--SCTTC
T ss_pred HHhcCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC--CCccc
Confidence 344555666 9999999999999999987 3369999999999999999999999985 6999999998876 33478
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
||+|++....... .....+|..+.++| +|||+|++++...
T Consensus 112 ~D~v~~~~~l~~~----------------------~~~~~~l~~~~~~L----~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 112 ADLIVSRGSVFFW----------------------EDVATAFREIYRIL----KSGGKTYIGGGFG 151 (219)
T ss_dssp EEEEEEESCGGGC----------------------SCHHHHHHHHHHHE----EEEEEEEEEECCS
T ss_pred ccEEEECchHhhc----------------------cCHHHHHHHHHHhC----CCCCEEEEEeccC
Confidence 9999985431100 01234678888887 9999999986443
No 108
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.29 E-value=1.4e-11 Score=116.09 Aligned_cols=112 Identities=20% Similarity=0.227 Sum_probs=89.1
Q ss_pred hHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCC
Q 011002 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~ 248 (496)
.....+.+.++.+|||+|||+|..+..++...+..+.|+++|+++.+++.+++++..+|+.++.+..+|+..... ..+
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--~~~ 145 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE--PLA 145 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG--GGC
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC--CCC
Confidence 445566788999999999999999999999885557999999999999999999999999889999999854322 136
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
.||+|+++.++... ...+.++| +|||+|+.++.+
T Consensus 146 ~fD~v~~~~~~~~~----------------------------~~~~~~~L----~pgG~lv~~~~~ 179 (215)
T 2yxe_A 146 PYDRIYTTAAGPKI----------------------------PEPLIRQL----KDGGKLLMPVGR 179 (215)
T ss_dssp CEEEEEESSBBSSC----------------------------CHHHHHTE----EEEEEEEEEESS
T ss_pred CeeEEEECCchHHH----------------------------HHHHHHHc----CCCcEEEEEECC
Confidence 89999997654211 12445565 999999988654
No 109
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.28 E-value=7.9e-13 Score=125.88 Aligned_cols=116 Identities=12% Similarity=0.059 Sum_probs=91.1
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccccC---
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLG--- 246 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~~--- 246 (496)
..++...++.+|||+|||+|..+..++..++..+.|+++|+++.+++.+++++...|+ .++.++.+|+......+.
T Consensus 62 ~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~ 141 (229)
T 2avd_A 62 ANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAG 141 (229)
T ss_dssp HHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT
T ss_pred HHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcC
Confidence 3334445788999999999999999999876568999999999999999999999998 469999999865421111
Q ss_pred -CCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 247 -LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 247 -~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
.+.||+|++|+|.. .+..++..+.++| +|||+|++..+.+
T Consensus 142 ~~~~~D~v~~d~~~~-------------------------~~~~~l~~~~~~L----~pgG~lv~~~~~~ 182 (229)
T 2avd_A 142 EAGTFDVAVVDADKE-------------------------NCSAYYERCLQLL----RPGGILAVLRVLW 182 (229)
T ss_dssp CTTCEEEEEECSCST-------------------------THHHHHHHHHHHE----EEEEEEEEECCSG
T ss_pred CCCCccEEEECCCHH-------------------------HHHHHHHHHHHHc----CCCeEEEEECCCc
Confidence 15799999998711 1234577777877 9999999987654
No 110
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.28 E-value=1.4e-12 Score=125.68 Aligned_cols=119 Identities=13% Similarity=0.158 Sum_probs=92.6
Q ss_pred hHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCcccc--
Q 011002 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVL-- 245 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~-- 245 (496)
+...++...++.+|||+|||+|..+..++..++..+.|+++|+++.+++.+++++...|+.+ +.++.+|+......+
T Consensus 63 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~ 142 (232)
T 3cbg_A 63 FLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQ 142 (232)
T ss_dssp HHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh
Confidence 33334444567899999999999999999988756899999999999999999999999964 999999975531111
Q ss_pred CC--CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 246 GL--NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 246 ~~--~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
.. +.||+|++|+++. ....++..+.++| +|||+|++.++.+.
T Consensus 143 ~~~~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~L----kpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 143 GKPLPEFDLIFIDADKR-------------------------NYPRYYEIGLNLL----RRGGLMVIDNVLWH 186 (232)
T ss_dssp SSSCCCEEEEEECSCGG-------------------------GHHHHHHHHHHTE----EEEEEEEEECTTGG
T ss_pred cCCCCCcCEEEECCCHH-------------------------HHHHHHHHHHHHc----CCCeEEEEeCCCcC
Confidence 11 6799999997620 1134577777876 99999999988764
No 111
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.28 E-value=2.3e-12 Score=116.18 Aligned_cols=108 Identities=16% Similarity=0.118 Sum_probs=82.7
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--CCCCCCEEEE
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--GLNTVDRVLL 255 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--~~~~FD~VLl 255 (496)
++.+|||+|||+|..+..++... ..|+++|+++.+++.+++|+..+++ ++.++++|+..+.... ..+.||+|++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~D~i~~ 116 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhccCCceEEEEE
Confidence 78899999999999999998863 2499999999999999999999998 8999999987642111 1247999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHH--HHhhhhcCCCCcEEEEEeCCCCC
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAA--IDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A--~~~L~~~lkpGG~LVYSTCSl~~ 317 (496)
|||+. +.. ..++... .++| +|||++++++++...
T Consensus 117 ~~~~~--~~~----------------------~~~~~~~~~~~~L----~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 117 APPYA--MDL----------------------AALFGELLASGLV----EAGGLYVLQHPKDLY 152 (171)
T ss_dssp CCCTT--SCT----------------------THHHHHHHHHTCE----EEEEEEEEEEETTSC
T ss_pred CCCCc--hhH----------------------HHHHHHHHhhccc----CCCcEEEEEeCCccC
Confidence 99965 210 0112222 3555 999999998877644
No 112
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.27 E-value=4.7e-12 Score=133.96 Aligned_cols=163 Identities=19% Similarity=0.157 Sum_probs=114.2
Q ss_pred cceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcC------------CCcEEEEEeCCHHHHHHHHHHHH
Q 011002 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMK------------NTGLIYANEMKASRLKSLTANLH 224 (496)
Q Consensus 157 ~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~------------~~g~V~AvDis~~rl~~l~~nl~ 224 (496)
.|.|+--..-+.+.+..+.+.++.+|||.|||+|+..+.++..+. ....|+|+|+++.+++.++.|+.
T Consensus 150 ~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 344433233344667778889999999999999999999888652 12479999999999999999999
Q ss_pred HcCCc--eEEEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCC---chhhccCCHHHHHHHHHHHHHHHHHHHHhhh
Q 011002 225 RMGVT--NTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKD---ESVKTSKSLEDIQKCSYLQKQLILAAIDMVD 299 (496)
Q Consensus 225 r~g~~--nv~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~---p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~ 299 (496)
..|+. ++.+.++|....+.. ..||+|++|||+++....... .+..+.. ...+..++.+++++|
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~~---~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~--------~~~~~~fl~~~~~~L- 297 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEPS---TLVDVILANPPFGTRPAGSVDINRPDFYVET--------KNNQLNFLQHMMLML- 297 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCCS---SCEEEEEECCCSSCCCTTCCCCCCTTSSSCC--------SCHHHHHHHHHHHHE-
T ss_pred HhCCCcCCCCEeeCCCCCCccc---CCcCEEEECCCCCCcccccchhhHhhcCCCC--------cchHHHHHHHHHHHh-
Confidence 99986 677889998776532 489999999999886543221 1111111 112456788888887
Q ss_pred hcCCCCcEEEEEeCC--CCCcCCHH-HHHHHHHhCCcE
Q 011002 300 ANSKSGGYIVYSTCS--IMVTENEA-VIDYALKKRDVK 334 (496)
Q Consensus 300 ~~lkpGG~LVYSTCS--l~~eENE~-vV~~~L~~~~~~ 334 (496)
+|||++++.++. ++....+. +-.+++++..+.
T Consensus 298 ---k~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~~~l~ 332 (445)
T 2okc_A 298 ---KTGGRAAVVLPDNVLFEAGAGETIRKRLLQDFNLH 332 (445)
T ss_dssp ---EEEEEEEEEEEHHHHHCSTHHHHHHHHHHHHEEEE
T ss_pred ---ccCCEEEEEECCcccccCcHHHHHHHHHHhcCcEE
Confidence 999999998865 22222333 444566665443
No 113
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.26 E-value=2.7e-11 Score=115.41 Aligned_cols=111 Identities=13% Similarity=0.094 Sum_probs=87.7
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
..++.+|||+|||+|..+..++...+ ...|+++|+++.+++.+++++...+ ++.++.+|+..++.. +.||+|++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~---~~fD~v~~ 115 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDFE---EKYDMVVS 115 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCCC---SCEEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCCC---CCceEEEE
Confidence 56789999999999999999999874 4799999999999999999987766 799999999887642 78999998
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
..... ..... ....+|..+.++| +|||+|++++....
T Consensus 116 ~~~l~-------------~~~~~-------~~~~~l~~~~~~L----kpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 116 ALSIH-------------HLEDE-------DKKELYKRSYSIL----KESGIFINADLVHG 152 (234)
T ss_dssp ESCGG-------------GSCHH-------HHHHHHHHHHHHE----EEEEEEEEEEECBC
T ss_pred eCccc-------------cCCHH-------HHHHHHHHHHHhc----CCCcEEEEEEecCC
Confidence 54210 11111 1135688888887 99999999886653
No 114
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.25 E-value=7.4e-11 Score=110.97 Aligned_cols=114 Identities=12% Similarity=0.170 Sum_probs=87.1
Q ss_pred hHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCC
Q 011002 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~ 248 (496)
++...+...++.+|||+|||+|..+..++... ..|+|+|+++.+++.+++++...+ ++.++.+|+..++. .+
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~---~~ 113 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWS--HISWAATDILQFST---AE 113 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTTTCCC---SC
T ss_pred HHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCC--CeEEEEcchhhCCC---CC
Confidence 44455667788999999999999999988763 589999999999999999987754 79999999988872 37
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTC 313 (496)
.||+|++... +.. ..... ....+|..+.++| +|||+|++++.
T Consensus 114 ~fD~v~~~~~------l~~------~~~~~-------~~~~~l~~~~~~L----~pgG~l~~~~~ 155 (216)
T 3ofk_A 114 LFDLIVVAEV------LYY------LEDMT-------QMRTAIDNMVKML----APGGHLVFGSA 155 (216)
T ss_dssp CEEEEEEESC------GGG------SSSHH-------HHHHHHHHHHHTE----EEEEEEEEEEE
T ss_pred CccEEEEccH------HHh------CCCHH-------HHHHHHHHHHHHc----CCCCEEEEEec
Confidence 8999998421 111 11111 1234677777876 99999999873
No 115
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.25 E-value=1.7e-11 Score=117.90 Aligned_cols=121 Identities=20% Similarity=0.250 Sum_probs=92.3
Q ss_pred cceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEec
Q 011002 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY 236 (496)
Q Consensus 157 ~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~ 236 (496)
.|..+.+......+...+.+.++.+|||+|||+|..+..++...+ +.|+++|+++.+++.+++++..+|+.++.+..+
T Consensus 70 ~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 147 (235)
T 1jg1_A 70 AGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILG 147 (235)
T ss_dssp TTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC
Confidence 455554444344455667888999999999999999999999875 689999999999999999999999988999999
Q ss_pred CCCC-CccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 237 DGNE-LPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 237 D~~~-l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
|+.. ++. ...||+|+++.++... ...+.+.| +|||+|+.++-.
T Consensus 148 d~~~~~~~---~~~fD~Ii~~~~~~~~----------------------------~~~~~~~L----~pgG~lvi~~~~ 191 (235)
T 1jg1_A 148 DGSKGFPP---KAPYDVIIVTAGAPKI----------------------------PEPLIEQL----KIGGKLIIPVGS 191 (235)
T ss_dssp CGGGCCGG---GCCEEEEEECSBBSSC----------------------------CHHHHHTE----EEEEEEEEEECS
T ss_pred CcccCCCC---CCCccEEEECCcHHHH----------------------------HHHHHHhc----CCCcEEEEEEec
Confidence 9722 221 2459999998653211 12344555 999999987654
No 116
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.25 E-value=1.6e-11 Score=118.55 Aligned_cols=115 Identities=15% Similarity=0.152 Sum_probs=88.8
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCC
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~F 250 (496)
+..+.+.++.+|||+|||+|..+..++... ...|+++|+|+.+++.+++++... .++.++.+|+..++. ..+.|
T Consensus 48 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~--~~~~f 121 (266)
T 3ujc_A 48 LSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEF--PENNF 121 (266)
T ss_dssp TTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCC--CTTCE
T ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCC--CCCcE
Confidence 344567789999999999999999999976 369999999999999999887665 679999999988753 34789
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 251 D~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
|+|++... + ...+. .....+|..+.++| +|||+|++++.+.
T Consensus 122 D~v~~~~~------l-------~~~~~-------~~~~~~l~~~~~~L----~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 122 DLIYSRDA------I-------LALSL-------ENKNKLFQKCYKWL----KPTGTLLITDYCA 162 (266)
T ss_dssp EEEEEESC------G-------GGSCH-------HHHHHHHHHHHHHE----EEEEEEEEEEEEE
T ss_pred EEEeHHHH------H-------HhcCh-------HHHHHHHHHHHHHc----CCCCEEEEEEecc
Confidence 99998421 1 01111 12245688888887 9999999987644
No 117
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.24 E-value=5.2e-12 Score=122.24 Aligned_cols=113 Identities=13% Similarity=0.082 Sum_probs=86.7
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
..+|.+|||+|||+|..+.+|+...+ ..|+++|+|+.+++.++++....+. ++.++.+|+..+...+..+.||.|+.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~FD~i~~ 134 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCC-ceEEEeehHHhhcccccccCCceEEE
Confidence 46799999999999999998887532 5899999999999999999988775 57788888876544455688999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
|+..+..... . ......++.++.++| ||||+|+|.+
T Consensus 135 D~~~~~~~~~----------~-------~~~~~~~~~e~~rvL----kPGG~l~f~~ 170 (236)
T 3orh_A 135 DTYPLSEETW----------H-------THQFNFIKNHAFRLL----KPGGVLTYCN 170 (236)
T ss_dssp CCCCCBGGGT----------T-------THHHHHHHHTHHHHE----EEEEEEEECC
T ss_pred eeeecccchh----------h-------hcchhhhhhhhhhee----CCCCEEEEEe
Confidence 9864333211 0 112345677888887 9999999854
No 118
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.24 E-value=5.3e-11 Score=114.18 Aligned_cols=110 Identities=13% Similarity=0.195 Sum_probs=89.2
Q ss_pred HHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccccCCC
Q 011002 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~~~~ 248 (496)
+...+.+.+|.+|||+|||+|..+..++.. .+.|+++|+++.+++.+++++..+|+ .++.+...|...... ..+
T Consensus 83 ~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~~~ 157 (248)
T 2yvl_A 83 IALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV--PEG 157 (248)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC--CTT
T ss_pred HHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc--CCC
Confidence 344456678999999999999999999987 37999999999999999999999998 679999999877531 236
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
.||+|++|+| +| ..++..+.++| +|||+|++.+.+.
T Consensus 158 ~~D~v~~~~~---------~~------------------~~~l~~~~~~L----~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 158 IFHAAFVDVR---------EP------------------WHYLEKVHKSL----MEGAPVGFLLPTA 193 (248)
T ss_dssp CBSEEEECSS---------CG------------------GGGHHHHHHHB----CTTCEEEEEESSH
T ss_pred cccEEEECCc---------CH------------------HHHHHHHHHHc----CCCCEEEEEeCCH
Confidence 8999999887 11 12366777776 9999999987553
No 119
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.24 E-value=2.6e-11 Score=114.57 Aligned_cols=117 Identities=14% Similarity=0.081 Sum_probs=86.7
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-----eEEEEecCCCCCcccc
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-----NTIVCNYDGNELPKVL 245 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-----nv~v~~~D~~~l~~~~ 245 (496)
...+...++.+|||+|||+|..+..++...+ ...|+++|+|+.+++.+++++...++. ++.++.+|+..++..
T Consensus 22 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 99 (219)
T 3jwg_A 22 VAVLKSVNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKR- 99 (219)
T ss_dssp HHHHHHTTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGG-
T ss_pred HHHHhhcCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccc-
Confidence 3444456788999999999999999987653 369999999999999999999888775 799999998665533
Q ss_pred CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
.+.||+|++.- ++. .....+ ...+|..+.++| +|||.|+.+.++
T Consensus 100 -~~~fD~V~~~~------~l~-------~~~~~~-------~~~~l~~~~~~L----kpgG~~i~~~~~ 143 (219)
T 3jwg_A 100 -FSGYDAATVIE------VIE-------HLDENR-------LQAFEKVLFEFT----RPQTVIVSTPNK 143 (219)
T ss_dssp -GTTCSEEEEES------CGG-------GCCHHH-------HHHHHHHHHTTT----CCSEEEEEEEBG
T ss_pred -cCCCCEEEEHH------HHH-------hCCHHH-------HHHHHHHHHHhh----CCCEEEEEccch
Confidence 37899999732 111 111111 235677777776 999977766554
No 120
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.24 E-value=3.5e-11 Score=107.89 Aligned_cols=126 Identities=21% Similarity=0.228 Sum_probs=91.2
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc------ccCCCC
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK------VLGLNT 249 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~------~~~~~~ 249 (496)
+.++.+|||+|||+|..+..++..++..+.|+++|+++ ++. +.++.+..+|+..++. .+..+.
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----------IVGVDFLQGDFRDELVMKALLERVGDSK 88 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----------CTTEEEEESCTTSHHHHHHHHHHHTTCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----------cCcEEEEEcccccchhhhhhhccCCCCc
Confidence 67889999999999999999999875557999999998 542 2678899999987541 023468
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHH
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALK 329 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~ 329 (496)
||+|++|+|+...+.. ..+.......+..++..+.++| +|||.++.++.. .++...+...+.
T Consensus 89 ~D~i~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~L----~~gG~l~~~~~~---~~~~~~~~~~~~ 150 (180)
T 1ej0_A 89 VQVVMSDMAPNMSGTP-----------AVDIPRAMYLVELALEMCRDVL----APGGSFVVKVFQ---GEGFDEYLREIR 150 (180)
T ss_dssp EEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHE----EEEEEEEEEEES---STTHHHHHHHHH
T ss_pred eeEEEECCCccccCCC-----------ccchHHHHHHHHHHHHHHHHHc----CCCcEEEEEEec---CCcHHHHHHHHH
Confidence 9999999998776631 1112222334567888888887 999999987643 344444444454
Q ss_pred h
Q 011002 330 K 330 (496)
Q Consensus 330 ~ 330 (496)
.
T Consensus 151 ~ 151 (180)
T 1ej0_A 151 S 151 (180)
T ss_dssp H
T ss_pred H
Confidence 4
No 121
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.23 E-value=1.9e-11 Score=113.12 Aligned_cols=114 Identities=20% Similarity=0.204 Sum_probs=82.8
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCC--------cEEEEEeCCHHHHHHHHHHHHHcCCceEEEE-ecCCCCCcc---
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNT--------GLIYANEMKASRLKSLTANLHRMGVTNTIVC-NYDGNELPK--- 243 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~--------g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~-~~D~~~l~~--- 243 (496)
+.++.+|||+|||+|..+..++..++.. +.|+|+|+++.+ .+.++.++ .+|......
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHH
Confidence 5689999999999999999999997653 799999999842 34567888 888776431
Q ss_pred ---ccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 244 ---VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 244 ---~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
.++...||+|++|+++...|.. ..+......++..++..+.++| +|||+|+++++..
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~L----kpgG~lv~~~~~~ 148 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFR-----------DLDHDRLISLCLTLLSVTPDIL----QPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHE----EEEEEEEEEECCS
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCc-----------ccCHHHHHHHHHHHHHHHHHHh----cCCCEEEEEecCC
Confidence 1222579999999866555431 1111222344567788888887 9999999987643
No 122
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.23 E-value=2.7e-10 Score=104.22 Aligned_cols=129 Identities=7% Similarity=-0.008 Sum_probs=95.6
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
+.++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++ .++.++..|+..++. ..+.||+|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~--~~~~~D~i~~ 113 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQI--SETDFDLIVS 113 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCC--CCCCEEEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCC--CCCceeEEEE
Confidence 457899999999999999999886 368999999999999998876 357888999887652 3478999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEE
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKL 335 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~~l 335 (496)
++++-. ..+.. ....+|..+.++| +|||++++++.+.. .-....+..++...++++
T Consensus 114 ~~~~~~------------~~~~~-------~~~~~l~~~~~~l----~~~G~l~~~~~~~~-~~~~~~~~~~l~~~Gf~~ 169 (195)
T 3cgg_A 114 AGNVMG------------FLAED-------GREPALANIHRAL----GADGRAVIGFGAGR-GWVFGDFLEVAERVGLEL 169 (195)
T ss_dssp CCCCGG------------GSCHH-------HHHHHHHHHHHHE----EEEEEEEEEEETTS-SCCHHHHHHHHHHHTEEE
T ss_pred CCcHHh------------hcChH-------HHHHHHHHHHHHh----CCCCEEEEEeCCCC-CcCHHHHHHHHHHcCCEE
Confidence 755321 11111 1245678888887 99999998876543 234566666777778777
Q ss_pred eec
Q 011002 336 VPC 338 (496)
Q Consensus 336 v~~ 338 (496)
+..
T Consensus 170 ~~~ 172 (195)
T 3cgg_A 170 ENA 172 (195)
T ss_dssp EEE
T ss_pred eee
Confidence 654
No 123
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.23 E-value=5.6e-11 Score=125.35 Aligned_cols=79 Identities=19% Similarity=0.199 Sum_probs=70.3
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
+.++.+|||+|||+|..++.+|.. ...|+|+|+++.+++.+++|+..+|+. +.++.+|+..+.. ..||+|++
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~----~~fD~Vv~ 359 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV----KGFDTVIV 359 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC----TTCSEEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc----cCCCEEEE
Confidence 567899999999999999999875 358999999999999999999999998 9999999987642 27999999
Q ss_pred CCCCCCC
Q 011002 256 DAPCSGT 262 (496)
Q Consensus 256 DpPCSg~ 262 (496)
|||+.|.
T Consensus 360 dPPr~g~ 366 (425)
T 2jjq_A 360 DPPRAGL 366 (425)
T ss_dssp CCCTTCS
T ss_pred cCCccch
Confidence 9998654
No 124
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.23 E-value=2.4e-12 Score=124.96 Aligned_cols=131 Identities=13% Similarity=0.141 Sum_probs=94.1
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHH---cCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCC---ccc
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAAL---MKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL---PKV 244 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l---~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l---~~~ 244 (496)
..++...++.+|||+|||+|+.|..|+.. +.+.+.|+|+|+++.+++.++ .++ .+|.++++|+..+ +.
T Consensus 74 ~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~-~~v~~~~gD~~~~~~l~~- 147 (236)
T 2bm8_A 74 HDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDM-ENITLHQGDCSDLTTFEH- 147 (236)
T ss_dssp HHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGC-TTEEEEECCSSCSGGGGG-
T ss_pred HHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccC-CceEEEECcchhHHHHHh-
Confidence 34444456789999999999999999998 455689999999999988776 222 5799999999875 32
Q ss_pred cCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHH-hhhhcCCCCcEEEEEeC-CCCCcCCHH
Q 011002 245 LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAID-MVDANSKSGGYIVYSTC-SIMVTENEA 322 (496)
Q Consensus 245 ~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~-~L~~~lkpGG~LVYSTC-Sl~~eENE~ 322 (496)
.....||+|++|+.- . + ...+|..+.+ +| +|||+|++..+ .+.+..+.+
T Consensus 148 ~~~~~fD~I~~d~~~---------~---------~-------~~~~l~~~~r~~L----kpGG~lv~~d~~~~~~~~~~~ 198 (236)
T 2bm8_A 148 LREMAHPLIFIDNAH---------A---------N-------TFNIMKWAVDHLL----EEGDYFIIEDMIPYWYRYAPQ 198 (236)
T ss_dssp GSSSCSSEEEEESSC---------S---------S-------HHHHHHHHHHHTC----CTTCEEEECSCHHHHHHHCHH
T ss_pred hccCCCCEEEECCch---------H---------h-------HHHHHHHHHHhhC----CCCCEEEEEeCcccccccCHH
Confidence 222379999998641 0 0 1235666775 66 99999999753 344455667
Q ss_pred HHHHHHHhC--CcEEe
Q 011002 323 VIDYALKKR--DVKLV 336 (496)
Q Consensus 323 vV~~~L~~~--~~~lv 336 (496)
.+..+++.. ++.++
T Consensus 199 ~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 199 LFSEYLGAFRDVLSMD 214 (236)
T ss_dssp HHHHHHHTTTTTEEEE
T ss_pred HHHHHHHhCcccEEEc
Confidence 778888765 45543
No 125
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.23 E-value=2.4e-11 Score=115.65 Aligned_cols=120 Identities=16% Similarity=0.162 Sum_probs=90.8
Q ss_pred cceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEec
Q 011002 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY 236 (496)
Q Consensus 157 ~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~ 236 (496)
.|..+.+......+...+.+.++.+|||+|||+|..+..++... +.|+++|+++.+++.+++++...| ++.++.+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~ 123 (231)
T 1vbf_A 49 PGINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN--NIKLILG 123 (231)
T ss_dssp TTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS--SEEEEES
T ss_pred CCCccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEEC
Confidence 34444443333345566678889999999999999999999874 689999999999999999998887 8999999
Q ss_pred CCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 237 DGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 237 D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
|+..... ..+.||+|+++.++... ...+.++| +|||+|++++.+-
T Consensus 124 d~~~~~~--~~~~fD~v~~~~~~~~~----------------------------~~~~~~~L----~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 124 DGTLGYE--EEKPYDRVVVWATAPTL----------------------------LCKPYEQL----KEGGIMILPIGVG 168 (231)
T ss_dssp CGGGCCG--GGCCEEEEEESSBBSSC----------------------------CHHHHHTE----EEEEEEEEEECSS
T ss_pred Ccccccc--cCCCccEEEECCcHHHH----------------------------HHHHHHHc----CCCcEEEEEEcCC
Confidence 9876322 13689999998764321 11344555 9999999987653
No 126
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.23 E-value=1.6e-10 Score=112.53 Aligned_cols=115 Identities=13% Similarity=0.200 Sum_probs=90.9
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCCCC
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~~~ 249 (496)
...+.+.++.+|||+|||+|..+..++... ...|+++|+|+.+++.+++++...|+. ++.++.+|+..++. ..+.
T Consensus 54 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~ 129 (273)
T 3bus_A 54 IALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF--EDAS 129 (273)
T ss_dssp HHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS--CTTC
T ss_pred HHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC--CCCC
Confidence 445667889999999999999999999875 369999999999999999999999986 59999999988763 3478
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
||+|++... +..-+ . ...+|..+.++| +|||+|++++...
T Consensus 130 fD~v~~~~~------l~~~~------~----------~~~~l~~~~~~L----~pgG~l~i~~~~~ 169 (273)
T 3bus_A 130 FDAVWALES------LHHMP------D----------RGRALREMARVL----RPGGTVAIADFVL 169 (273)
T ss_dssp EEEEEEESC------TTTSS------C----------HHHHHHHHHTTE----EEEEEEEEEEEEE
T ss_pred ccEEEEech------hhhCC------C----------HHHHHHHHHHHc----CCCeEEEEEEeec
Confidence 999997322 11111 1 134677777776 9999999988654
No 127
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.22 E-value=4.2e-12 Score=122.35 Aligned_cols=120 Identities=14% Similarity=0.194 Sum_probs=92.9
Q ss_pred hhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCC-ccc-
Q 011002 168 FLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNEL-PKV- 244 (496)
Q Consensus 168 ~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l-~~~- 244 (496)
.+...++...++.+|||+|||+|..+..++..++..+.|+++|+++.+++.+++++...|+.+ +.+..+|+... +..
T Consensus 50 ~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 129 (239)
T 2hnk_A 50 QFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLI 129 (239)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHH
Confidence 344444555678999999999999999999998656899999999999999999999999976 99999998653 211
Q ss_pred -----------cCC--CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 245 -----------LGL--NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 245 -----------~~~--~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
+.. +.||+|++|... .. ...++..+.++| +|||+|++.
T Consensus 130 ~~~~~~~~~~~f~~~~~~fD~I~~~~~~------------------~~-------~~~~l~~~~~~L----~pgG~lv~~ 180 (239)
T 2hnk_A 130 DSKSAPSWASDFAFGPSSIDLFFLDADK------------------EN-------YPNYYPLILKLL----KPGGLLIAD 180 (239)
T ss_dssp HCSSCCGGGTTTCCSTTCEEEEEECSCG------------------GG-------HHHHHHHHHHHE----EEEEEEEEE
T ss_pred hhcccccccccccCCCCCcCEEEEeCCH------------------HH-------HHHHHHHHHHHc----CCCeEEEEE
Confidence 111 679999998530 01 124577777876 999999998
Q ss_pred eCCCC
Q 011002 312 TCSIM 316 (496)
Q Consensus 312 TCSl~ 316 (496)
++.+.
T Consensus 181 ~~~~~ 185 (239)
T 2hnk_A 181 NVLWD 185 (239)
T ss_dssp CSSGG
T ss_pred ccccC
Confidence 87654
No 128
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.22 E-value=1.6e-11 Score=119.28 Aligned_cols=120 Identities=15% Similarity=0.218 Sum_probs=86.5
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH------cCCceEEEEecCCCC-CccccCCC
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHR------MGVTNTIVCNYDGNE-LPKVLGLN 248 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r------~g~~nv~v~~~D~~~-l~~~~~~~ 248 (496)
..++.+|||+|||+|..+..||...+ ...|+|+|+++.+++.+++++.. .++.|+.++.+|+.. ++..+..+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCc
Confidence 35678999999999999999998764 46899999999999999998875 467899999999987 44334457
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
.||.|++.-|. |..+.. ..... ..+..+|..+.++| +|||.|+++|+.
T Consensus 123 ~~D~v~~~~~d---------p~~k~~---h~krr--~~~~~~l~~~~~~L----kpGG~l~~~td~ 170 (235)
T 3ckk_A 123 QLTKMFFLFPD---------PHFKRT---KHKWR--IISPTLLAEYAYVL----RVGGLVYTITDV 170 (235)
T ss_dssp CEEEEEEESCC-------------------------CCCHHHHHHHHHHE----EEEEEEEEEESC
T ss_pred CeeEEEEeCCC---------chhhhh---hhhhh--hhhHHHHHHHHHHC----CCCCEEEEEeCC
Confidence 89999986541 211100 00000 01235788888887 999999998863
No 129
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.22 E-value=5.2e-11 Score=116.43 Aligned_cols=110 Identities=15% Similarity=0.180 Sum_probs=88.2
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
.+.++.+|||+|||+|..+..++...+ .+.|+++|+++.+++.+++++...|+.++.++..|+..++. ..+.||+|+
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~--~~~~fD~v~ 110 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPF--EDSSFDHIF 110 (276)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCS--CTTCEEEEE
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCC--CCCCeeEEE
Confidence 456899999999999999999999854 47999999999999999999999999999999999987763 347899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTC 313 (496)
+... +..-+ .. ..+|..+.++| +|||+|++.+.
T Consensus 111 ~~~~------l~~~~------~~----------~~~l~~~~~~L----~pgG~l~~~~~ 143 (276)
T 3mgg_A 111 VCFV------LEHLQ------SP----------EEALKSLKKVL----KPGGTITVIEG 143 (276)
T ss_dssp EESC------GGGCS------CH----------HHHHHHHHHHE----EEEEEEEEEEE
T ss_pred Eech------hhhcC------CH----------HHHHHHHHHHc----CCCcEEEEEEc
Confidence 8432 11000 11 24577777776 99999999863
No 130
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.22 E-value=4.7e-11 Score=119.29 Aligned_cols=114 Identities=11% Similarity=-0.049 Sum_probs=89.1
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~V 253 (496)
.+.++.+|||+|||+|..+..++....+.+.|+++|+++.+++.+++++...|+.+ +.++++|+..++. . +.||+|
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~-~~fD~v 191 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT--R-EGYDLL 191 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC--C-SCEEEE
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc--c-CCeEEE
Confidence 35789999999999999999886333445799999999999999999999999876 9999999988763 3 789999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
+++.+.... | .. .....+|..+.++| +|||+|++++.+
T Consensus 192 ~~~~~~~~~------~------~~-------~~~~~~l~~~~~~L----kpgG~l~i~~~~ 229 (305)
T 3ocj_A 192 TSNGLNIYE------P------DD-------ARVTELYRRFWQAL----KPGGALVTSFLT 229 (305)
T ss_dssp ECCSSGGGC------C------CH-------HHHHHHHHHHHHHE----EEEEEEEEECCC
T ss_pred EECChhhhc------C------CH-------HHHHHHHHHHHHhc----CCCeEEEEEecC
Confidence 985431110 0 11 12235688888887 999999998754
No 131
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.21 E-value=5.1e-11 Score=117.28 Aligned_cols=114 Identities=10% Similarity=0.034 Sum_probs=88.3
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCCCC
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~~~ 249 (496)
...+.+.++.+|||+|||+|..+..++...+ ..|+++|+|+.+++.+++++...|+. ++.+..+|+..++ +.
T Consensus 57 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 129 (287)
T 1kpg_A 57 LGKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-----EP 129 (287)
T ss_dssp HTTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-----CC
T ss_pred HHHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC-----CC
Confidence 3445677899999999999999999997654 48999999999999999999998874 6999999987654 68
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
||+|++.- ++..- .. .....+|..+.++| +|||+|+.++...
T Consensus 130 fD~v~~~~------~l~~~-------~~-------~~~~~~l~~~~~~L----kpgG~l~~~~~~~ 171 (287)
T 1kpg_A 130 VDRIVSIG------AFEHF-------GH-------ERYDAFFSLAHRLL----PADGVMLLHTITG 171 (287)
T ss_dssp CSEEEEES------CGGGT-------CT-------TTHHHHHHHHHHHS----CTTCEEEEEEEEE
T ss_pred eeEEEEeC------chhhc-------Ch-------HHHHHHHHHHHHhc----CCCCEEEEEEecC
Confidence 99999732 11110 00 11244677777876 9999999988664
No 132
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.21 E-value=9.4e-11 Score=108.18 Aligned_cols=114 Identities=18% Similarity=0.098 Sum_probs=89.0
Q ss_pred hHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCC
Q 011002 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~ 248 (496)
.+...+...++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++...++.++.+..+|+..++. .+
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---~~ 96 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF---DR 96 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC---CC
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC---CC
Confidence 4455667678889999999999999999886 35899999999999999999999999889999999987763 37
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.||+|++..... .....+ ...+|..+.++| +|||+|++.+
T Consensus 97 ~~D~v~~~~~l~-------------~~~~~~-------~~~~l~~~~~~L----~~gG~l~~~~ 136 (199)
T 2xvm_A 97 QYDFILSTVVLM-------------FLEAKT-------IPGLIANMQRCT----KPGGYNLIVA 136 (199)
T ss_dssp CEEEEEEESCGG-------------GSCGGG-------HHHHHHHHHHTE----EEEEEEEEEE
T ss_pred CceEEEEcchhh-------------hCCHHH-------HHHHHHHHHHhc----CCCeEEEEEE
Confidence 899999854311 011111 244677777876 9999987654
No 133
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.21 E-value=2e-12 Score=134.44 Aligned_cols=164 Identities=15% Similarity=0.067 Sum_probs=105.4
Q ss_pred ceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecC
Q 011002 158 GFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD 237 (496)
Q Consensus 158 G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D 237 (496)
|.|+--..-..+.+..+.+.++.+|||+|||+|+.++.+++.++....|+|+|+++.+++.+ .++.++++|
T Consensus 19 g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D 89 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILAD 89 (421)
T ss_dssp --CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESC
T ss_pred ceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCC
Confidence 44443333344455666665677999999999999999998874457999999999988665 468899999
Q ss_pred CCCCccccCCCCCCEEEECCCCCCCCcccC-----CchhhccCCH--HHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEE
Q 011002 238 GNELPKVLGLNTVDRVLLDAPCSGTGVISK-----DESVKTSKSL--EDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY 310 (496)
Q Consensus 238 ~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r-----~p~i~~~~s~--~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVY 310 (496)
...+.. .+.||+|++|||+...+...+ .++.+..... .........+..++..++++| +|||++++
T Consensus 90 ~~~~~~---~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~L----k~~G~~~~ 162 (421)
T 2ih2_A 90 FLLWEP---GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLL----KPGGVLVF 162 (421)
T ss_dssp GGGCCC---SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHE----EEEEEEEE
T ss_pred hhhcCc---cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHh----CCCCEEEE
Confidence 877642 268999999999987654211 0111000000 000001124557899999987 99999999
Q ss_pred EeCC--CCCcCCHHHHHHHHHhCCcEEee
Q 011002 311 STCS--IMVTENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 311 STCS--l~~eENE~vV~~~L~~~~~~lv~ 337 (496)
.+++ +.....+.+.+++++.....++.
T Consensus 163 i~p~~~l~~~~~~~lr~~l~~~~~~~i~~ 191 (421)
T 2ih2_A 163 VVPATWLVLEDFALLREFLAREGKTSVYY 191 (421)
T ss_dssp EEEGGGGTCGGGHHHHHHHHHHSEEEEEE
T ss_pred EEChHHhcCccHHHHHHHHHhcCCeEEEE
Confidence 8876 22334455555655543333433
No 134
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.21 E-value=8.3e-11 Score=116.34 Aligned_cols=111 Identities=14% Similarity=0.141 Sum_probs=88.9
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCCCCCCEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~~~FD~V 253 (496)
.+.++.+|||+|||+|..+..++...+ ..|+++|+++.+++.+++++...|+. ++.++.+|+..++ +..+.||+|
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~v 154 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP--CEDNSYDFI 154 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS--SCTTCEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC--CCCCCEeEE
Confidence 667899999999999999999998763 58999999999999999999999984 6999999998876 334789999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
++.- ++..-++ ...+|..+.++| +|||+|++++...
T Consensus 155 ~~~~------~l~~~~~----------------~~~~l~~~~~~L----kpgG~l~~~~~~~ 190 (297)
T 2o57_A 155 WSQD------AFLHSPD----------------KLKVFQECARVL----KPRGVMAITDPMK 190 (297)
T ss_dssp EEES------CGGGCSC----------------HHHHHHHHHHHE----EEEEEEEEEEEEE
T ss_pred Eecc------hhhhcCC----------------HHHHHHHHHHHc----CCCeEEEEEEecc
Confidence 9732 1111111 234678888887 9999999987643
No 135
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.21 E-value=1e-11 Score=125.37 Aligned_cols=90 Identities=19% Similarity=0.287 Sum_probs=77.7
Q ss_pred HHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc---C
Q 011002 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---G 246 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~---~ 246 (496)
++..|.+.+|.+|||+|||+|+.|..++..++ .+.|+|+|+|+.+++.+++|+..+| .++.++++|+..++..+ .
T Consensus 18 ~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l~~~g 95 (301)
T 1m6y_A 18 VIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLLKTLG 95 (301)
T ss_dssp HHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHHHHTT
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHHHhcC
Confidence 45667888999999999999999999999876 5899999999999999999999988 78999999988765322 1
Q ss_pred CCCCCEEEECCCCCC
Q 011002 247 LNTVDRVLLDAPCSG 261 (496)
Q Consensus 247 ~~~FD~VLlDpPCSg 261 (496)
...||.|++|+|||.
T Consensus 96 ~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 96 IEKVDGILMDLGVST 110 (301)
T ss_dssp CSCEEEEEEECSCCH
T ss_pred CCCCCEEEEcCccch
Confidence 147999999999984
No 136
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.20 E-value=4.7e-11 Score=116.85 Aligned_cols=124 Identities=15% Similarity=0.153 Sum_probs=97.3
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
+.++.+|||+|||+|..+..++.+ + ..|+|+|+++.+++.+++|+..+|+. +.+..+|+... ++.+.||+|++
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g--~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~---~~~~~fD~Vv~ 190 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-G--GKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAA---LPFGPFDLLVA 190 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHH---GGGCCEEEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-C--CeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhc---CcCCCCCEEEE
Confidence 467899999999999999988775 2 28999999999999999999999987 88888887652 12368999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEE
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKL 335 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~~l 335 (496)
+.+. .....++..+.++| +|||+|+++.... +....+..++++.++++
T Consensus 191 n~~~-------------------------~~~~~~l~~~~~~L----kpgG~lils~~~~---~~~~~v~~~l~~~Gf~~ 238 (254)
T 2nxc_A 191 NLYA-------------------------ELHAALAPRYREAL----VPGGRALLTGILK---DRAPLVREAMAGAGFRP 238 (254)
T ss_dssp ECCH-------------------------HHHHHHHHHHHHHE----EEEEEEEEEEEEG---GGHHHHHHHHHHTTCEE
T ss_pred CCcH-------------------------HHHHHHHHHHHHHc----CCCCEEEEEeecc---CCHHHHHHHHHHCCCEE
Confidence 7651 11245677777776 9999999986543 45666777777888887
Q ss_pred eec
Q 011002 336 VPC 338 (496)
Q Consensus 336 v~~ 338 (496)
+..
T Consensus 239 ~~~ 241 (254)
T 2nxc_A 239 LEE 241 (254)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 137
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.20 E-value=1.3e-11 Score=123.08 Aligned_cols=97 Identities=13% Similarity=0.078 Sum_probs=79.6
Q ss_pred eEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecC
Q 011002 159 FYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYD 237 (496)
Q Consensus 159 ~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D 237 (496)
+|..+.......+..+.+.++.+|||+|||+|..|..++... +.|+|+|+|+.+++.+++++...|. .++.++++|
T Consensus 9 ~fl~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D 85 (285)
T 1zq9_A 9 HILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGD 85 (285)
T ss_dssp CEECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESC
T ss_pred CccCCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcc
Confidence 344444444455667788899999999999999999999873 5899999999999999999988877 579999999
Q ss_pred CCCCccccCCCCCCEEEECCCCCCC
Q 011002 238 GNELPKVLGLNTVDRVLLDAPCSGT 262 (496)
Q Consensus 238 ~~~l~~~~~~~~FD~VLlDpPCSg~ 262 (496)
+..++ + ..||.|++|+||..+
T Consensus 86 ~~~~~--~--~~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 86 VLKTD--L--PFFDTCVANLPYQIS 106 (285)
T ss_dssp TTTSC--C--CCCSEEEEECCGGGH
T ss_pred eeccc--c--hhhcEEEEecCcccc
Confidence 98764 2 479999999997643
No 138
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.20 E-value=9.7e-11 Score=117.27 Aligned_cols=116 Identities=9% Similarity=0.077 Sum_probs=90.6
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCCCC
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~~~ 249 (496)
...+.+.++.+|||+|||+|..+..++...+ ..|+++|+|+.+++.+++++...|+. ++.+..+|+..++ +.
T Consensus 83 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~ 155 (318)
T 2fk8_A 83 LDKLDLKPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-----EP 155 (318)
T ss_dssp HTTSCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-----CC
T ss_pred HHhcCCCCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC-----CC
Confidence 3445678899999999999999999998763 58999999999999999999999985 4999999987664 67
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~ 317 (496)
||+|++... +.. .... ....+|..+.++| +|||+|+.++++...
T Consensus 156 fD~v~~~~~------l~~-------~~~~-------~~~~~l~~~~~~L----kpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 156 VDRIVSIEA------FEH-------FGHE-------NYDDFFKRCFNIM----PADGRMTVQSSVSYH 199 (318)
T ss_dssp CSEEEEESC------GGG-------TCGG-------GHHHHHHHHHHHS----CTTCEEEEEEEECCC
T ss_pred cCEEEEeCh------HHh-------cCHH-------HHHHHHHHHHHhc----CCCcEEEEEEeccCC
Confidence 999997422 110 0001 1245677788876 999999999877543
No 139
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.20 E-value=3.6e-11 Score=112.42 Aligned_cols=103 Identities=16% Similarity=0.148 Sum_probs=84.8
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEECC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDp 257 (496)
++.+|||+|||+|..+..++...+ .+.|+++|+++.+++.+++++..+|+.++.+..+|+..++. .+.||+|+++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---~~~~D~i~~~~ 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS---EPPFDGVISRA 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC---CSCEEEEECSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc---cCCcCEEEEec
Confidence 478999999999999999998864 47999999999999999999999999889999999987652 26899999743
Q ss_pred CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 258 PCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
- .+ ...++..+.++| +|||+|++....
T Consensus 141 ~-------------------~~-------~~~~l~~~~~~L----~~gG~l~~~~~~ 167 (207)
T 1jsx_A 141 F-------------------AS-------LNDMVSWCHHLP----GEQGRFYALKGQ 167 (207)
T ss_dssp S-------------------SS-------HHHHHHHHTTSE----EEEEEEEEEESS
T ss_pred c-------------------CC-------HHHHHHHHHHhc----CCCcEEEEEeCC
Confidence 1 00 134677777776 999999987654
No 140
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.19 E-value=6.6e-11 Score=120.78 Aligned_cols=124 Identities=19% Similarity=0.211 Sum_probs=96.0
Q ss_pred chhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccC
Q 011002 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLG 246 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~ 246 (496)
+.+....+.+.++.+|||+|||+|..+..++...+ ...|+++|+|+.+++.+++++..+++. +.++.+|+..++
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~~~~~---- 258 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNVFSEV---- 258 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTC----
T ss_pred HHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEccccccc----
Confidence 44455566666788999999999999999998854 368999999999999999999999886 566788887654
Q ss_pred CCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 011002 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 247 ~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~ 317 (496)
.+.||+|+++||... |.. ........++..+.++| +|||.|++++.+..+
T Consensus 259 ~~~fD~Iv~~~~~~~-g~~----------------~~~~~~~~~l~~~~~~L----kpgG~l~i~~~~~~~ 308 (343)
T 2pjd_A 259 KGRFDMIISNPPFHD-GMQ----------------TSLDAAQTLIRGAVRHL----NSGGELRIVANAFLP 308 (343)
T ss_dssp CSCEEEEEECCCCCS-SSH----------------HHHHHHHHHHHHHGGGE----EEEEEEEEEEETTSS
T ss_pred cCCeeEEEECCCccc-Ccc----------------CCHHHHHHHHHHHHHhC----CCCcEEEEEEcCCCC
Confidence 368999999999531 110 01123356788888876 999999999887654
No 141
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.18 E-value=4.8e-11 Score=112.57 Aligned_cols=115 Identities=7% Similarity=-0.002 Sum_probs=83.2
Q ss_pred cCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc------------CCceEEEEecCCCCC
Q 011002 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM------------GVTNTIVCNYDGNEL 241 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~------------g~~nv~v~~~D~~~l 241 (496)
+.+.++.+|||+|||+|..+..|+.. ...|+|+|+|+.+++.++++.... +..++.++++|+..+
T Consensus 18 l~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l 94 (203)
T 1pjz_A 18 LNVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL 94 (203)
T ss_dssp HCCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred cccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence 45668899999999999999999986 258999999999999999876431 235789999999988
Q ss_pred ccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 242 PKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 242 ~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
+... .+.||+|++.. ++. ..... ....++..+.++| ||||++++.++...
T Consensus 95 ~~~~-~~~fD~v~~~~------~l~-------~l~~~-------~~~~~l~~~~r~L----kpgG~~~l~~~~~~ 144 (203)
T 1pjz_A 95 TARD-IGHCAAFYDRA------AMI-------ALPAD-------MRERYVQHLEALM----PQACSGLLITLEYD 144 (203)
T ss_dssp THHH-HHSEEEEEEES------CGG-------GSCHH-------HHHHHHHHHHHHS----CSEEEEEEEEESSC
T ss_pred Cccc-CCCEEEEEECc------chh-------hCCHH-------HHHHHHHHHHHHc----CCCcEEEEEEEecC
Confidence 6321 15799998622 110 11111 1234677777776 99999777776653
No 142
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.18 E-value=2.2e-10 Score=108.22 Aligned_cols=111 Identities=12% Similarity=0.187 Sum_probs=86.7
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-----eEEEEecCCCCCccccCCCCCC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-----NTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-----nv~v~~~D~~~l~~~~~~~~FD 251 (496)
.++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++...++. ++.+...|+..++. ..+.||
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~D 103 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF--HDSSFD 103 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS--CTTCEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC--CCCcee
Confidence 47899999999999999999886 358999999999999999999888873 68899999988763 347899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
+|++... +..- .... ....+|..+.++| +|||+|+++++..
T Consensus 104 ~v~~~~~------l~~~------~~~~-------~~~~~l~~~~~~L----~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 104 FAVMQAF------LTSV------PDPK-------ERSRIIKEVFRVL----KPGAYLYLVEFGQ 144 (235)
T ss_dssp EEEEESC------GGGC------CCHH-------HHHHHHHHHHHHE----EEEEEEEEEEEBC
T ss_pred EEEEcch------hhcC------CCHH-------HHHHHHHHHHHHc----CCCeEEEEEECCc
Confidence 9998532 1111 1111 1235678888887 9999999998765
No 143
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.17 E-value=2.1e-11 Score=117.14 Aligned_cols=115 Identities=13% Similarity=0.083 Sum_probs=85.0
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
+.++.+|||+|||+|..+..++... ...|+++|+|+.+++.+++++...+ .++.++.+|+..+...+..+.||+|++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhcccCCCceEEEEE
Confidence 5688999999999999999886542 2489999999999999999998887 579999999877622244578999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
|.- +. .+ .++ . ......++..+.++| ||||+|++.+++
T Consensus 135 d~~--~~-~~-~~~------~-------~~~~~~~l~~~~r~L----kpgG~l~~~~~~ 172 (236)
T 1zx0_A 135 DTY--PL-SE-ETW------H-------THQFNFIKNHAFRLL----KPGGVLTYCNLT 172 (236)
T ss_dssp CCC--CC-BG-GGT------T-------THHHHHHHHTHHHHE----EEEEEEEECCHH
T ss_pred CCc--cc-ch-hhh------h-------hhhHHHHHHHHHHhc----CCCeEEEEEecC
Confidence 721 11 00 000 0 011234677788876 999999987655
No 144
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.17 E-value=4.1e-11 Score=130.07 Aligned_cols=163 Identities=15% Similarity=0.080 Sum_probs=111.8
Q ss_pred cceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCC-----------------cEEEEEeCCHHHHHHH
Q 011002 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNT-----------------GLIYANEMKASRLKSL 219 (496)
Q Consensus 157 ~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~-----------------g~V~AvDis~~rl~~l 219 (496)
.|.|+--..-+.+.+.++.+.++.+|||.|||+|++.+.++..+... ..|+|+|+++.++..+
T Consensus 148 ~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp --CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 35444333344566778889999999999999999999988876421 3699999999999999
Q ss_pred HHHHHHcCCce-----EEEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHH
Q 011002 220 TANLHRMGVTN-----TIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAA 294 (496)
Q Consensus 220 ~~nl~r~g~~n-----v~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A 294 (496)
+.|+...|+.+ +.+.++|....+. .....||+|++|||+++........+.....+ ..+..++.++
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL~~~~-~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~--------~~~~~Fl~~~ 298 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTLGSDG-ENLPKAHIVATNPPFGSAAGTNITRTFVHPTS--------NKQLCFMQHI 298 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTTSHHH-HTSCCEEEEEECCCCTTCSSCCCCSCCSSCCS--------CHHHHHHHHH
T ss_pred HHHHHHhCCCccccccCCeEeCCCccccc-ccccCCeEEEECCCcccccchhhHhhcCCCCC--------chHHHHHHHH
Confidence 99999889876 7788999876432 12368999999999988654321111111001 1233568888
Q ss_pred HHhhhhcCCCCcEEEEEeCC--CCCcCCHHHH-HHHHHhCC
Q 011002 295 IDMVDANSKSGGYIVYSTCS--IMVTENEAVI-DYALKKRD 332 (496)
Q Consensus 295 ~~~L~~~lkpGG~LVYSTCS--l~~eENE~vV-~~~L~~~~ 332 (496)
+++| +|||++++.+.. ++....+..+ .+++++..
T Consensus 299 l~~L----k~gGr~a~V~p~~~L~~~~~~~~iR~~L~~~~~ 335 (541)
T 2ar0_A 299 IETL----HPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKCH 335 (541)
T ss_dssp HHHE----EEEEEEEEEEEHHHHHCCTHHHHHHHHHHHHEE
T ss_pred HHHh----CCCCEEEEEecCcceecCcHHHHHHHHHhhcCC
Confidence 9987 999999888653 2222223444 55565543
No 145
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.17 E-value=2.6e-10 Score=106.73 Aligned_cols=107 Identities=15% Similarity=0.104 Sum_probs=83.9
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
...++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++ .|..++.++.+|+..+ ...+.||+|+
T Consensus 43 ~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~---~~~~~~D~v~ 112 (218)
T 3ou2_A 43 AGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDW---TPDRQWDAVF 112 (218)
T ss_dssp TTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSC---CCSSCEEEEE
T ss_pred cCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccC---CCCCceeEEE
Confidence 3677889999999999999999987 3689999999999999887 6777899999999877 2347899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
+.- ++.. ... .....+|..+.++| +|||+|++++.+.
T Consensus 113 ~~~------~l~~-------~~~-------~~~~~~l~~~~~~L----~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 113 FAH------WLAH-------VPD-------DRFEAFWESVRSAV----APGGVVEFVDVTD 149 (218)
T ss_dssp EES------CGGG-------SCH-------HHHHHHHHHHHHHE----EEEEEEEEEEECC
T ss_pred Eec------hhhc-------CCH-------HHHHHHHHHHHHHc----CCCeEEEEEeCCC
Confidence 842 1111 111 11245688888887 9999999998776
No 146
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.16 E-value=2.5e-10 Score=106.27 Aligned_cols=107 Identities=13% Similarity=0.148 Sum_probs=84.0
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
..++ +|||+|||+|..+..++.. ...|+++|+++.+++.+++++...+. ++.+..+|+..++ +..+.||+|++
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~--~~~~~fD~v~~ 100 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFD--IVADAWEGIVS 100 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBS--CCTTTCSEEEE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcC--CCcCCccEEEE
Confidence 4567 9999999999999888875 35899999999999999999998887 7899999998775 33478999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
... . .... ....+|..+.++| +|||+|++++.+.
T Consensus 101 ~~~-----~----------~~~~-------~~~~~l~~~~~~L----~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 101 IFC-----H----------LPSS-------LRQQLYPKVYQGL----KPGGVFILEGFAP 134 (202)
T ss_dssp ECC-----C----------CCHH-------HHHHHHHHHHTTC----CSSEEEEEEEECT
T ss_pred Ehh-----c----------CCHH-------HHHHHHHHHHHhc----CCCcEEEEEEecc
Confidence 311 1 1111 2345677777776 9999999998664
No 147
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.16 E-value=7.4e-11 Score=123.47 Aligned_cols=117 Identities=14% Similarity=0.072 Sum_probs=86.7
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHH-------HHcCC--ceEEEEecCCCCC
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANL-------HRMGV--TNTIVCNYDGNEL 241 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl-------~r~g~--~nv~v~~~D~~~l 241 (496)
+..+.+.+|++|||+|||+|..++.+|...+ ...|+|+|+++.+++.+++++ ..+|+ .+|.++++|+..+
T Consensus 166 l~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~l 244 (438)
T 3uwp_A 166 IDEIKMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSE 244 (438)
T ss_dssp HHHHCCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSH
T ss_pred HHhcCCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCC
Confidence 4556789999999999999999999998764 357999999999999998865 44676 5799999999887
Q ss_pred ccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 242 PKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 242 ~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
+.......||+|+++++|.. | + ....|...++.| ||||+||.+....
T Consensus 245 p~~d~~~~aDVVf~Nn~~F~-------p---------d-------l~~aL~Ei~RvL----KPGGrIVssE~f~ 291 (438)
T 3uwp_A 245 EWRERIANTSVIFVNNFAFG-------P---------E-------VDHQLKERFANM----KEGGRIVSSKPFA 291 (438)
T ss_dssp HHHHHHHTCSEEEECCTTCC-------H---------H-------HHHHHHHHHTTS----CTTCEEEESSCSS
T ss_pred ccccccCCccEEEEcccccC-------c---------h-------HHHHHHHHHHcC----CCCcEEEEeeccc
Confidence 53110147999999987521 1 1 122345555655 9999999764443
No 148
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.16 E-value=5.1e-11 Score=117.80 Aligned_cols=116 Identities=13% Similarity=0.100 Sum_probs=92.1
Q ss_pred hHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCC
Q 011002 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~ 248 (496)
+.-.++...++.+|||+|||+|..+..++..+++...|+|+|+++.+++.+++++...+. ++.+..+|+..++. .+
T Consensus 13 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~---~~ 88 (284)
T 3gu3_A 13 LVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIEL---ND 88 (284)
T ss_dssp HHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCC---SS
T ss_pred HHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCc---CC
Confidence 333444667899999999999999999998876557999999999999999999988876 89999999998763 26
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
.||+|++... +..-+ . ...+|..+.++| +|||+|+..++.
T Consensus 89 ~fD~v~~~~~------l~~~~------~----------~~~~l~~~~~~L----kpgG~l~~~~~~ 128 (284)
T 3gu3_A 89 KYDIAICHAF------LLHMT------T----------PETMLQKMIHSV----KKGGKIICFEPH 128 (284)
T ss_dssp CEEEEEEESC------GGGCS------S----------HHHHHHHHHHTE----EEEEEEEEEECC
T ss_pred CeeEEEECCh------hhcCC------C----------HHHHHHHHHHHc----CCCCEEEEEecc
Confidence 8999998542 11001 0 135678888887 999999988776
No 149
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.16 E-value=1.1e-10 Score=115.95 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=87.2
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CCceEEEEecCCCCCcccc----CCCC
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GVTNTIVCNYDGNELPKVL----GLNT 249 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~--g~~nv~v~~~D~~~l~~~~----~~~~ 249 (496)
..++.+|||+|||+|..+..++..+.....|+|+|+|+.+++.+++++... +..++.++++|+..++... ..+.
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 457899999999999999999987745689999999999999999999987 3467999999998876321 1268
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
||+|++.-. .. +. ....+|..+.++| +|||+|++.+++
T Consensus 114 fD~V~~~~~---l~---------~~-----------~~~~~l~~~~~~L----kpgG~l~i~~~~ 151 (299)
T 3g5t_A 114 IDMITAVEC---AH---------WF-----------DFEKFQRSAYANL----RKDGTIAIWGYA 151 (299)
T ss_dssp EEEEEEESC---GG---------GS-----------CHHHHHHHHHHHE----EEEEEEEEEEEE
T ss_pred eeEEeHhhH---HH---------Hh-----------CHHHHHHHHHHhc----CCCcEEEEEecC
Confidence 999998432 11 10 1234677788877 999999986555
No 150
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.16 E-value=1.6e-10 Score=109.07 Aligned_cols=108 Identities=13% Similarity=0.138 Sum_probs=85.4
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.++.+|||+|||+|..+..++... ..|+++|+++.+++.+++++...+ .++.++.+|+..++ +..+.||+|+++
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~--~~~~~~D~v~~~ 110 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLS--FEDKTFDYVIFI 110 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCC--SCTTCEEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCC--CCCCcEEEEEEc
Confidence 458899999999999999888763 289999999999999999999888 67899999998765 234689999997
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
++..- ....+ ...+|..+.++| +|||+|+++++.
T Consensus 111 ~~~~~-------------~~~~~-------~~~~l~~~~~~L----~~gG~l~~~~~~ 144 (227)
T 1ve3_A 111 DSIVH-------------FEPLE-------LNQVFKEVRRVL----KPSGKFIMYFTD 144 (227)
T ss_dssp SCGGG-------------CCHHH-------HHHHHHHHHHHE----EEEEEEEEEEEC
T ss_pred CchHh-------------CCHHH-------HHHHHHHHHHHc----CCCcEEEEEecC
Confidence 65100 11111 245678888887 999999998775
No 151
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.15 E-value=9.3e-11 Score=110.78 Aligned_cols=143 Identities=14% Similarity=0.173 Sum_probs=96.2
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHH----HHcCCceEEEEecCCCCCccccC
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANL----HRMGVTNTIVCNYDGNELPKVLG 246 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl----~r~g~~nv~v~~~D~~~l~~~~~ 246 (496)
...+.+.++.+|||+|||+|..+..++...+ .+.|+|+|+|+.+++.+.+++ ...++.++.++++|+..++..
T Consensus 20 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~-- 96 (218)
T 3mq2_A 20 FEQLRSQYDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPL-- 96 (218)
T ss_dssp HHHHHTTSSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSC--
T ss_pred HHHhhccCCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCC--
Confidence 3455678899999999999999999999754 479999999999888654443 356778899999999987642
Q ss_pred CCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC-----------
Q 011002 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI----------- 315 (496)
Q Consensus 247 ~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl----------- 315 (496)
.+. |.|++..|. . .........+..+|..+.++| ||||+|+++....
T Consensus 97 ~~~-d~v~~~~~~----------------~-~~~~~~~~~~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~ 154 (218)
T 3mq2_A 97 SGV-GELHVLMPW----------------G-SLLRGVLGSSPEMLRGMAAVC----RPGASFLVALNLHAWRPSVPEVGE 154 (218)
T ss_dssp CCE-EEEEEESCC----------------H-HHHHHHHTSSSHHHHHHHHTE----EEEEEEEEEEEGGGBTTBCGGGTT
T ss_pred CCC-CEEEEEccc----------------h-hhhhhhhccHHHHHHHHHHHc----CCCcEEEEEecccccccccccccc
Confidence 244 887764431 0 011111112245678888887 9999999853221
Q ss_pred CCcCCHH----HHHHHHHhCCcEEeec
Q 011002 316 MVTENEA----VIDYALKKRDVKLVPC 338 (496)
Q Consensus 316 ~~eENE~----vV~~~L~~~~~~lv~~ 338 (496)
.+.-+.. .+...+...+++++.+
T Consensus 155 ~~~~~~~~~~~~l~~~l~~aGf~i~~~ 181 (218)
T 3mq2_A 155 HPEPTPDSADEWLAPRYAEAGWKLADC 181 (218)
T ss_dssp CCCCCHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CCccchHHHHHHHHHHHHHcCCCceee
Confidence 1122222 2344566678877665
No 152
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.15 E-value=1.5e-10 Score=119.94 Aligned_cols=114 Identities=16% Similarity=0.193 Sum_probs=89.2
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc-----C-C--ceEEEEecCCCCCcc----
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-----G-V--TNTIVCNYDGNELPK---- 243 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~-----g-~--~nv~v~~~D~~~l~~---- 243 (496)
+.++.+|||+|||+|..+..++...++.+.|+++|+++.+++.+++++..+ | . .++.++.+|+..+..
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 567899999999999999999999866689999999999999999998876 4 3 579999999987621
Q ss_pred ccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 244 VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 244 ~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
.+..+.||+|+++.. +..-++ ...+|..+.++| +|||+|++++...
T Consensus 161 ~~~~~~fD~V~~~~~------l~~~~d----------------~~~~l~~~~r~L----kpgG~l~i~~~~~ 206 (383)
T 4fsd_A 161 GVPDSSVDIVISNCV------CNLSTN----------------KLALFKEIHRVL----RDGGELYFSDVYA 206 (383)
T ss_dssp CCCTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHE----EEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccc------hhcCCC----------------HHHHHHHHHHHc----CCCCEEEEEEecc
Confidence 234578999998643 111011 135688888887 9999999986443
No 153
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.15 E-value=2.8e-10 Score=109.40 Aligned_cols=136 Identities=13% Similarity=0.068 Sum_probs=97.4
Q ss_pred hcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCE
Q 011002 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 173 ~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~ 252 (496)
.+...++.+|||+|||+|..+..++... ...|+++|+++.+++.+++++... .++.++.+|+..++. ..+.||+
T Consensus 88 ~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~--~~~~fD~ 161 (254)
T 1xtp_A 88 SLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETATL--PPNTYDL 161 (254)
T ss_dssp TSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCCC--CSSCEEE
T ss_pred hhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCCC--CCCCeEE
Confidence 3455678999999999999999998875 357999999999999999988665 678999999887652 3478999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc------------CC
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT------------EN 320 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~e------------EN 320 (496)
|++.- ++ ...+.. ....+|..+.++| +|||+|++++...... -.
T Consensus 162 v~~~~------~l-------~~~~~~-------~~~~~l~~~~~~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 217 (254)
T 1xtp_A 162 IVIQW------TA-------IYLTDA-------DFVKFFKHCQQAL----TPNGYIFFKENCSTGDRFLVDKEDSSLTRS 217 (254)
T ss_dssp EEEES------CG-------GGSCHH-------HHHHHHHHHHHHE----EEEEEEEEEEEBC--CCEEEETTTTEEEBC
T ss_pred EEEcc------hh-------hhCCHH-------HHHHHHHHHHHhc----CCCeEEEEEecCCCcccceecccCCcccCC
Confidence 99732 11 111111 1345678888887 9999999988532211 13
Q ss_pred HHHHHHHHHhCCcEEeec
Q 011002 321 EAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 321 E~vV~~~L~~~~~~lv~~ 338 (496)
.+.+..+|++.+++++.+
T Consensus 218 ~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 218 DIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEe
Confidence 455666666666666543
No 154
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.15 E-value=1.1e-10 Score=109.82 Aligned_cols=110 Identities=12% Similarity=0.129 Sum_probs=83.2
Q ss_pred hcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCE
Q 011002 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 173 ~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~ 252 (496)
.+.+.++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++. .++.++.+|+..++. . +.||+
T Consensus 40 ~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~--~-~~fD~ 109 (220)
T 3hnr_A 40 DVVNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEV--P-TSIDT 109 (220)
T ss_dssp HHHHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCC--C-SCCSE
T ss_pred HhhccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCC--C-CCeEE
Confidence 344568899999999999999999886 3689999999999999988765 568899999988763 2 78999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
|++... +. ..... ....+|..+.++| +|||+|+.++....
T Consensus 110 v~~~~~------l~-------~~~~~-------~~~~~l~~~~~~L----kpgG~l~i~~~~~~ 149 (220)
T 3hnr_A 110 IVSTYA------FH-------HLTDD-------EKNVAIAKYSQLL----NKGGKIVFADTIFA 149 (220)
T ss_dssp EEEESC------GG-------GSCHH-------HHHHHHHHHHHHS----CTTCEEEEEEECBS
T ss_pred EEECcc------hh-------cCChH-------HHHHHHHHHHHhc----CCCCEEEEEecccc
Confidence 998532 11 01111 1134677788876 99999999875543
No 155
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.15 E-value=3e-10 Score=106.58 Aligned_cols=128 Identities=13% Similarity=0.045 Sum_probs=94.1
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
.+.++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++ ++.+..+|+..++ ..+.||+|+
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~---~~~~fD~v~ 107 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLD---AIDAYDAVW 107 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCC---CCSCEEEEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCC---CCCcEEEEE
Confidence 3457899999999999999999876 358999999999999999887 3556778887776 247899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc-----------CCHHH
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT-----------ENEAV 323 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~e-----------ENE~v 323 (496)
+... +. ..... ....+|..+.++| +|||+|+++++..... -+.+.
T Consensus 108 ~~~~------l~-------~~~~~-------~~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (211)
T 3e23_A 108 AHAC------LL-------HVPRD-------ELADVLKLIWRAL----KPGGLFYASYKSGEGEGRDKLARYYNYPSEEW 163 (211)
T ss_dssp ECSC------GG-------GSCHH-------HHHHHHHHHHHHE----EEEEEEEEEEECCSSCEECTTSCEECCCCHHH
T ss_pred ecCc------hh-------hcCHH-------HHHHHHHHHHHhc----CCCcEEEEEEcCCCcccccccchhccCCCHHH
Confidence 8432 11 11111 2245678888887 9999999987765432 25666
Q ss_pred HHHHHHhCC-cEEeec
Q 011002 324 IDYALKKRD-VKLVPC 338 (496)
Q Consensus 324 V~~~L~~~~-~~lv~~ 338 (496)
+..+++..+ ++++.+
T Consensus 164 ~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 164 LRARYAEAGTWASVAV 179 (211)
T ss_dssp HHHHHHHHCCCSEEEE
T ss_pred HHHHHHhCCCcEEEEE
Confidence 777777767 776654
No 156
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.14 E-value=1.3e-10 Score=114.44 Aligned_cols=131 Identities=13% Similarity=0.172 Sum_probs=98.4
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
++.+|||+|||+|..+..++.. ...|+|+|+++.+++.+++++...|+ .++.++.+|+..++.. ..+.||+|++.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~fD~v~~~ 143 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH-LETPVDLILFH 143 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG-CSSCEEEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh-cCCCceEEEEC
Confidence 4789999999999999999886 36899999999999999999999999 5799999999887642 34789999985
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC--------------------
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM-------------------- 316 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~-------------------- 316 (496)
.. +..-+ . ...+|..+.++| +|||+|++++.+..
T Consensus 144 ~~------l~~~~------~----------~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (285)
T 4htf_A 144 AV------LEWVA------D----------PRSVLQTLWSVL----RPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMP 197 (285)
T ss_dssp SC------GGGCS------C----------HHHHHHHHHHTE----EEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCC
T ss_pred ch------hhccc------C----------HHHHHHHHHHHc----CCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhcc
Confidence 32 11111 1 134678888887 99999999875311
Q ss_pred ----------CcCCHHHHHHHHHhCCcEEeec
Q 011002 317 ----------VTENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 317 ----------~eENE~vV~~~L~~~~~~lv~~ 338 (496)
..-..+.+..+|+..+++++..
T Consensus 198 ~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~ 229 (285)
T 4htf_A 198 KKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGK 229 (285)
T ss_dssp CC----CCCSCCBCHHHHHHHHHHTTCEEEEE
T ss_pred ccccccCCCCCCCCHHHHHHHHHHCCCceeee
Confidence 1113456667777788887754
No 157
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.14 E-value=4.8e-11 Score=115.00 Aligned_cols=114 Identities=14% Similarity=0.133 Sum_probs=83.7
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCC-HHHHHHH---HHHHHHcCCceEEEEecCCCCCccccCCCCCC
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMK-ASRLKSL---TANLHRMGVTNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis-~~rl~~l---~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD 251 (496)
.+++.+|||+|||+|..+..++...+ .+.|+|+|+| +.+++.+ ++++.+.|+.|+.++.+|+..++..+. ..||
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~-d~v~ 99 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELK-NIAD 99 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGT-TCEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhcc-CeEE
Confidence 36789999999999999999987643 4789999999 6666555 888888999999999999998865332 5678
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.|.++.|. .. ...........+|..+.++| ||||+|++++
T Consensus 100 ~i~~~~~~----------------~~-~~~~~~~~~~~~l~~~~r~L----kpGG~l~i~~ 139 (225)
T 3p2e_A 100 SISILFPW----------------GT-LLEYVIKPNRDILSNVADLA----KKEAHFEFVT 139 (225)
T ss_dssp EEEEESCC----------------HH-HHHHHHTTCHHHHHHHHTTE----EEEEEEEEEE
T ss_pred EEEEeCCC----------------cH-HhhhhhcchHHHHHHHHHhc----CCCcEEEEEE
Confidence 88877661 11 01111111234677777776 9999999844
No 158
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.14 E-value=5.6e-10 Score=116.21 Aligned_cols=107 Identities=12% Similarity=0.111 Sum_probs=84.6
Q ss_pred CCCcccccceEEEecCcch---hH---HHhcCCCCCCeEeecccCCcHHHHHHHHHcCC---------------------
Q 011002 150 GATPEYMAGFYMLQSASSF---LP---VMALAPQEKERVIDMAAAPGGKTTYIAALMKN--------------------- 202 (496)
Q Consensus 150 ~~~~~~~~G~~~iQd~sS~---l~---v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~--------------------- 202 (496)
...+.++.||...|..+.+ ++ +.++...++.+|||.|||+|++++.+|....+
T Consensus 161 sG~~l~krgyr~~~~~Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~ 240 (385)
T 3ldu_A 161 TGDALHKRGYREKANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKI 240 (385)
T ss_dssp CCSCTTCCSCCCC--CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHH
T ss_pred CCChhhhcccccCCCCCCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHH
Confidence 3346778888877765543 22 23445678999999999999999998877532
Q ss_pred ----------------CcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCCCCCCEEEECCCC
Q 011002 203 ----------------TGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (496)
Q Consensus 203 ----------------~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~~~FD~VLlDpPC 259 (496)
...|+|+|+++.+++.++.|+..+|+. +|.+.+.|+.+++. ...||+|++|||+
T Consensus 241 w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~---~~~~D~Iv~NPPy 311 (385)
T 3ldu_A 241 WWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS---EDEFGFIITNPPY 311 (385)
T ss_dssp HHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC---SCBSCEEEECCCC
T ss_pred HHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc---CCCCcEEEECCCC
Confidence 147999999999999999999999997 59999999988753 2589999999995
No 159
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.14 E-value=1e-10 Score=107.22 Aligned_cols=134 Identities=14% Similarity=0.087 Sum_probs=92.1
Q ss_pred hhHHHhcCC--CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc
Q 011002 168 FLPVMALAP--QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL 245 (496)
Q Consensus 168 ~l~v~~L~~--~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~ 245 (496)
.+.+..+.. .++.+|||+|||+|..+..++... .|+|+|+|+.+++. ..++.++++|+....
T Consensus 11 ~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~--- 74 (170)
T 3q87_B 11 YTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES---------HRGGNLVRADLLCSI--- 74 (170)
T ss_dssp HHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT---------CSSSCEEECSTTTTB---
T ss_pred HHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc---------ccCCeEEECChhhhc---
Confidence 334444544 678899999999999999888753 89999999999987 356889999987632
Q ss_pred CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHH
Q 011002 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVID 325 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~ 325 (496)
..+.||+|++|||+....-... +..... ...++..+++. + |||++++++.+. .....+.
T Consensus 75 ~~~~fD~i~~n~~~~~~~~~~~-----~~~~~~--------~~~~~~~~~~~----l-pgG~l~~~~~~~---~~~~~l~ 133 (170)
T 3q87_B 75 NQESVDVVVFNPPYVPDTDDPI-----IGGGYL--------GREVIDRFVDA----V-TVGMLYLLVIEA---NRPKEVL 133 (170)
T ss_dssp CGGGCSEEEECCCCBTTCCCTT-----TBCCGG--------GCHHHHHHHHH----C-CSSEEEEEEEGG---GCHHHHH
T ss_pred ccCCCCEEEECCCCccCCcccc-----ccCCcc--------hHHHHHHHHhh----C-CCCEEEEEEecC---CCHHHHH
Confidence 2278999999999754321100 100101 12245555555 3 999999987654 4566667
Q ss_pred HHHHhCCcEEeec
Q 011002 326 YALKKRDVKLVPC 338 (496)
Q Consensus 326 ~~L~~~~~~lv~~ 338 (496)
.++++.+++.+.+
T Consensus 134 ~~l~~~gf~~~~~ 146 (170)
T 3q87_B 134 ARLEERGYGTRIL 146 (170)
T ss_dssp HHHHHTTCEEEEE
T ss_pred HHHHHCCCcEEEE
Confidence 7777878776654
No 160
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.14 E-value=1.1e-10 Score=116.40 Aligned_cols=117 Identities=15% Similarity=0.064 Sum_probs=83.4
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-----------------------------
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV----------------------------- 228 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~----------------------------- 228 (496)
++.+|||+|||+|..+..|+..++. ..|+|+|+++.+++.+++++...+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~-~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGP-SRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCC-SEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 6899999999999999999998754 6999999999999999999877653
Q ss_pred -----------------------------ceEEEEecCCCCCccc---cCCCCCCEEEECCCCCCCCcccCCchhhccCC
Q 011002 229 -----------------------------TNTIVCNYDGNELPKV---LGLNTVDRVLLDAPCSGTGVISKDESVKTSKS 276 (496)
Q Consensus 229 -----------------------------~nv~v~~~D~~~l~~~---~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s 276 (496)
.+|.++.+|....... +..+.||+|++... + .|
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~v------l------~~--- 189 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSL------T------KW--- 189 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESC------H------HH---
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChH------H------HH---
Confidence 3799999998754311 23478999998221 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 277 LEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 277 ~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
-.+..-......+|..+.++| +|||+|+..+..+
T Consensus 190 -ihl~~~~~~~~~~l~~~~~~L----kpGG~lil~~~~~ 223 (292)
T 3g07_A 190 -VHLNWGDEGLKRMFRRIYRHL----RPGGILVLEPQPW 223 (292)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHE----EEEEEEEEECCCH
T ss_pred -hhhcCCHHHHHHHHHHHHHHh----CCCcEEEEecCCc
Confidence 000011123456788888887 9999999976543
No 161
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.13 E-value=1.2e-10 Score=113.51 Aligned_cols=123 Identities=13% Similarity=0.073 Sum_probs=88.3
Q ss_pred hHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHH------HHHHHHHHHHHcCC-ceEEEEecC-CCC
Q 011002 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKAS------RLKSLTANLHRMGV-TNTIVCNYD-GNE 240 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~------rl~~l~~nl~r~g~-~nv~v~~~D-~~~ 240 (496)
.+...+.+.++.+|||+|||+|..+..++...++.+.|+++|+|+. +++.+++++...|+ .++.+...| ...
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 113 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSD 113 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTT
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhh
Confidence 3445567889999999999999999999998755579999999997 99999999999988 579999998 322
Q ss_pred CccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 011002 241 LPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 241 l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~ 317 (496)
....+..+.||+|++..+.... + .. ..++... +.| ++|||+|+.++.+...
T Consensus 114 ~~~~~~~~~fD~v~~~~~l~~~------~------~~----------~~~~~~~-~~l---~~~gG~l~~~~~~~~~ 164 (275)
T 3bkx_A 114 DLGPIADQHFDRVVLAHSLWYF------A------SA----------NALALLF-KNM---AAVCDHVDVAEWSMQP 164 (275)
T ss_dssp CCGGGTTCCCSEEEEESCGGGS------S------CH----------HHHHHHH-HHH---TTTCSEEEEEEECSSC
T ss_pred ccCCCCCCCEEEEEEccchhhC------C------CH----------HHHHHHH-HHH---hCCCCEEEEEEecCCC
Confidence 2212334789999985431110 0 11 1123333 333 3779999998877643
No 162
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.13 E-value=1.8e-10 Score=110.68 Aligned_cols=134 Identities=10% Similarity=0.054 Sum_probs=98.3
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.++.+|||+|||+|..+..++... ...|+++|+++.+++.+++++...+..++.++..|+..++. ..+.||+|+++
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~--~~~~fD~v~~~ 153 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP--EPDSYDVIWIQ 153 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC--CSSCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCC--CCCCEEEEEEc
Confidence 368999999999999999887764 35899999999999999999988766678999999877653 23689999985
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC-----------cCCHHHHH
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV-----------TENEAVID 325 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~-----------eENE~vV~ 325 (496)
-. +. ..... ....+|..+.++| +|||+|++++..... .-..+.+.
T Consensus 154 ~~------l~-------~~~~~-------~~~~~l~~~~~~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (241)
T 2ex4_A 154 WV------IG-------HLTDQ-------HLAEFLRRCKGSL----RPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVR 209 (241)
T ss_dssp SC------GG-------GSCHH-------HHHHHHHHHHHHE----EEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHH
T ss_pred ch------hh-------hCCHH-------HHHHHHHHHHHhc----CCCeEEEEEEccCCCcceecccCCcccCCHHHHH
Confidence 31 11 11111 1245678888887 999999997753321 01456677
Q ss_pred HHHHhCCcEEeec
Q 011002 326 YALKKRDVKLVPC 338 (496)
Q Consensus 326 ~~L~~~~~~lv~~ 338 (496)
.++++.+++++..
T Consensus 210 ~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 210 RIICSAGLSLLAE 222 (241)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHHcCCeEEEe
Confidence 7777777776654
No 163
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.13 E-value=4e-11 Score=121.14 Aligned_cols=107 Identities=13% Similarity=0.130 Sum_probs=74.3
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeC----CHHHHHHHHHHHHHcCCceEEEEec-CCCCCccccCCCCC
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEM----KASRLKSLTANLHRMGVTNTIVCNY-DGNELPKVLGLNTV 250 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDi----s~~rl~~l~~nl~r~g~~nv~v~~~-D~~~l~~~~~~~~F 250 (496)
+.+|.+|||+|||||++|.++++. +.|+|+|+ ++.+++.+ .+...|..+|.++.+ |+..++. ..|
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~~----~~f 149 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIPP----ERC 149 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSCC----CCC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCCc----CCC
Confidence 467899999999999999999876 57999999 55443211 112234467899998 9887652 689
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 251 D~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
|+|++|.+|+ +|... .+. .. +..+|..+.++| +|||.|+..+
T Consensus 150 D~V~sd~~~~-~g~~~----------~d~---~~--~l~~L~~~~~~L----kpGG~~v~kv 191 (305)
T 2p41_A 150 DTLLCDIGES-SPNPT----------VEA---GR--TLRVLNLVENWL----SNNTQFCVKV 191 (305)
T ss_dssp SEEEECCCCC-CSSHH----------HHH---HH--HHHHHHHHHHHC----CTTCEEEEEE
T ss_pred CEEEECCccc-cCcch----------hhH---HH--HHHHHHHHHHHh----CCCCEEEEEe
Confidence 9999999987 66310 011 10 113566666765 9999888743
No 164
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.13 E-value=2.2e-10 Score=112.76 Aligned_cols=110 Identities=15% Similarity=0.141 Sum_probs=86.1
Q ss_pred HhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCC
Q 011002 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 172 ~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD 251 (496)
..+...++.+|||+|||+|..+..++.. ...|+|+|+|+.+++.+++++...|+ ++.++.+|+..++. .+.||
T Consensus 114 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~---~~~fD 186 (286)
T 3m70_A 114 DAAKIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI---QENYD 186 (286)
T ss_dssp HHHHHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC---CSCEE
T ss_pred HHhhccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc---cCCcc
Confidence 3444457899999999999999999886 25899999999999999999999998 89999999987664 37899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
+|+++.+.... +.. ....+|..+.++| +|||+|++.+
T Consensus 187 ~i~~~~~~~~~-------------~~~-------~~~~~l~~~~~~L----kpgG~l~i~~ 223 (286)
T 3m70_A 187 FIVSTVVFMFL-------------NRE-------RVPSIIKNMKEHT----NVGGYNLIVA 223 (286)
T ss_dssp EEEECSSGGGS-------------CGG-------GHHHHHHHHHHTE----EEEEEEEEEE
T ss_pred EEEEccchhhC-------------CHH-------HHHHHHHHHHHhc----CCCcEEEEEE
Confidence 99997642111 111 1234677777876 9999976643
No 165
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.13 E-value=4.8e-11 Score=118.76 Aligned_cols=113 Identities=15% Similarity=0.211 Sum_probs=85.1
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CC---------ceEEEEecCCCCCcccc
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV---------TNTIVCNYDGNELPKVL 245 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~--g~---------~nv~v~~~D~~~l~~~~ 245 (496)
..+.+|||+|||+|+.+..++.. +.+.|+++|+++.+++.+++++ .+ ++ .++.++.+|+..+...
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~- 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN- 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-
Confidence 45689999999999999998876 3479999999999999999998 55 33 4699999998765322
Q ss_pred CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
.+.||+|++|+|+. .|. + .. + ...+++..+.++| +|||.|+..+++..
T Consensus 150 -~~~fD~Ii~d~~~~-~~~----~--------~~---l--~~~~~l~~~~~~L----~pgG~lv~~~~~~~ 197 (281)
T 1mjf_A 150 -NRGFDVIIADSTDP-VGP----A--------KV---L--FSEEFYRYVYDAL----NNPGIYVTQAGSVY 197 (281)
T ss_dssp -CCCEEEEEEECCCC-C--------------------T--TSHHHHHHHHHHE----EEEEEEEEEEEETT
T ss_pred -cCCeeEEEECCCCC-CCc----c--------hh---h--hHHHHHHHHHHhc----CCCcEEEEEcCCcc
Confidence 36899999999852 121 0 00 0 1245677777776 99999999877753
No 166
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.12 E-value=1.6e-10 Score=114.79 Aligned_cols=115 Identities=17% Similarity=0.165 Sum_probs=87.0
Q ss_pred HhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC---ceEEEEecCCCCCccccCCC
Q 011002 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV---TNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 172 ~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~---~nv~v~~~D~~~l~~~~~~~ 248 (496)
..+.+.+ .+|||+|||+|..+..++.. ...|+|+|+++.+++.+++++...++ .++.++.+|+..++. .+
T Consensus 77 ~~~~~~~-~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~ 149 (299)
T 3g2m_A 77 TRTGPVS-GPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL---DK 149 (299)
T ss_dssp HHHCCCC-SCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC---SC
T ss_pred HhhCCCC-CcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc---CC
Confidence 3344444 49999999999999998876 35899999999999999999998875 579999999998764 37
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
.||+|++.. +++ ...+.. ....+|..+.++| +|||+|++++....
T Consensus 150 ~fD~v~~~~-----~~~-------~~~~~~-------~~~~~l~~~~~~L----~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 150 RFGTVVISS-----GSI-------NELDEA-------DRRGLYASVREHL----EPGGKFLLSLAMSE 194 (299)
T ss_dssp CEEEEEECH-----HHH-------TTSCHH-------HHHHHHHHHHHHE----EEEEEEEEEEECCH
T ss_pred CcCEEEECC-----ccc-------ccCCHH-------HHHHHHHHHHHHc----CCCcEEEEEeecCc
Confidence 899998621 110 011111 2345678888887 99999999987753
No 167
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.10 E-value=2.4e-10 Score=106.50 Aligned_cols=122 Identities=11% Similarity=0.056 Sum_probs=87.8
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.++.+|||+|||+|..+..++.... ..|+++|+++.+++.+++++.. ..++.+..+|+..++ +..+.||+|+++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~--~~~~~fD~v~~~ 114 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLD--FPSASFDVVLEK 114 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCC--SCSSCEEEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCC--CCCCcccEEEEC
Confidence 6789999999999999999888632 3799999999999999998764 357889999998875 334789999987
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
++....- ..++ ..|...... ......+|..+.++| +|||++++++++.
T Consensus 115 ~~~~~~~--~~~~-~~~~~~~~~----~~~~~~~l~~~~~~L----kpgG~li~~~~~~ 162 (215)
T 2pxx_A 115 GTLDALL--AGER-DPWTVSSEG----VHTVDQVLSEVSRVL----VPGGRFISMTSAA 162 (215)
T ss_dssp SHHHHHT--TTCS-CTTSCCHHH----HHHHHHHHHHHHHHE----EEEEEEEEEESCC
T ss_pred cchhhhc--cccc-cccccccch----hHHHHHHHHHHHHhC----cCCCEEEEEeCCC
Confidence 6531110 0000 112222222 223356788888887 9999999998764
No 168
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.10 E-value=7e-10 Score=115.81 Aligned_cols=106 Identities=12% Similarity=0.136 Sum_probs=83.6
Q ss_pred CCcccccceEEEecCcch---h---HHHhcCCCCCCeEeecccCCcHHHHHHHHHcCC----------------------
Q 011002 151 ATPEYMAGFYMLQSASSF---L---PVMALAPQEKERVIDMAAAPGGKTTYIAALMKN---------------------- 202 (496)
Q Consensus 151 ~~~~~~~G~~~iQd~sS~---l---~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~---------------------- 202 (496)
..+.++.||...|..+.+ + .+.+....++..|||.|||+|+.++.+|....+
T Consensus 168 g~~L~krgyr~~~~~Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w 247 (393)
T 3k0b_A 168 GAGLHKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVW 247 (393)
T ss_dssp SSCTTCCSTTTTSCSCSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHH
T ss_pred CCcccccccccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHH
Confidence 345667776655554432 2 234456778999999999999999988876543
Q ss_pred ---------------CcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCEEEECCCC
Q 011002 203 ---------------TGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (496)
Q Consensus 203 ---------------~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~VLlDpPC 259 (496)
...|+|+|+|+.+++.++.|+..+|+.+ |.+.++|+..++. ...||+|++|||+
T Consensus 248 ~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~---~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 248 ADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT---EDEYGVVVANPPY 317 (393)
T ss_dssp HHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC---CCCSCEEEECCCC
T ss_pred HHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC---CCCCCEEEECCCC
Confidence 1469999999999999999999999975 9999999988763 2589999999996
No 169
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.10 E-value=4.7e-10 Score=110.19 Aligned_cols=113 Identities=12% Similarity=0.116 Sum_probs=87.2
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccccCCCCCCEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
+.++.+|||+|||+|..+..++.. +.+.|+++|+++.+++.+++++...++ .++.++.+|+..++.. ..+.||+|+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~fD~v~ 138 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD-LGKEFDVIS 138 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC-CSSCEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC-CCCCcCEEE
Confidence 467899999999999999988876 335899999999999999999999887 4699999999877531 247899999
Q ss_pred ECCCCCCCCcccCCchhhcc-CCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 255 LDAPCSGTGVISKDESVKTS-KSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~-~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
++-. + .+. .+. .....+|..+.++| +|||+|+++++.
T Consensus 139 ~~~~------l------~~~~~~~-------~~~~~~l~~~~~~L----kpgG~l~~~~~~ 176 (298)
T 1ri5_A 139 SQFS------F------HYAFSTS-------ESLDIAQRNIARHL----RPGGYFIMTVPS 176 (298)
T ss_dssp EESC------G------GGGGSSH-------HHHHHHHHHHHHTE----EEEEEEEEEEEC
T ss_pred ECch------h------hhhcCCH-------HHHHHHHHHHHHhc----CCCCEEEEEECC
Confidence 8531 1 000 111 22345788888887 999999998866
No 170
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.09 E-value=1.5e-10 Score=125.63 Aligned_cols=168 Identities=18% Similarity=0.182 Sum_probs=110.8
Q ss_pred cceEEEecCcchhHHHhcC----CCCCCeEeecccCCcHHHHHHHHHcCC--CcEEEEEeCCHHHHHHHHHHHHHcCC--
Q 011002 157 AGFYMLQSASSFLPVMALA----PQEKERVIDMAAAPGGKTTYIAALMKN--TGLIYANEMKASRLKSLTANLHRMGV-- 228 (496)
Q Consensus 157 ~G~~~iQd~sS~l~v~~L~----~~~g~~VLDlcAGpGgktl~lA~l~~~--~g~V~AvDis~~rl~~l~~nl~r~g~-- 228 (496)
.|.|+--..-+.+.+.++. +.++.+|||.|||+|++.+.++..+.. ...|+|+|+++..+..++.|+...|+
T Consensus 196 ~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~ 275 (542)
T 3lkd_A 196 AGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPI 275 (542)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCG
T ss_pred CCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCc
Confidence 3444332233445555555 678999999999999999998888742 45899999999999999999999998
Q ss_pred ceEEEEecCCCCC--ccccCCCCCCEEEECCCCCCCCccc----CCchhh-cc-CCHHHHHHHHHHHHHHHHHHHHhhhh
Q 011002 229 TNTIVCNYDGNEL--PKVLGLNTVDRVLLDAPCSGTGVIS----KDESVK-TS-KSLEDIQKCSYLQKQLILAAIDMVDA 300 (496)
Q Consensus 229 ~nv~v~~~D~~~l--~~~~~~~~FD~VLlDpPCSg~Gvi~----r~p~i~-~~-~s~~~i~~l~~lQ~~LL~~A~~~L~~ 300 (496)
.++.+.++|.... +. .....||+|+.|||+++..-.. .++... +. ..+ ....+..++.+++++|
T Consensus 276 ~~~~I~~gDtL~~d~p~-~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~-----~s~~~~~Fl~~~l~~L-- 347 (542)
T 3lkd_A 276 ENQFLHNADTLDEDWPT-QEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAP-----KSKADFAFLLHGYYHL-- 347 (542)
T ss_dssp GGEEEEESCTTTSCSCC-SSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCC-----TTCCHHHHHHHHHHTB--
T ss_pred CccceEecceecccccc-cccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCC-----CchhhHHHHHHHHHHh--
Confidence 5688999998765 32 2247899999999998542111 111110 00 000 0111234788899987
Q ss_pred cCC-CCcEEEEEeCC-CCCcCC-HHHHH-HHHHhCCcE
Q 011002 301 NSK-SGGYIVYSTCS-IMVTEN-EAVID-YALKKRDVK 334 (496)
Q Consensus 301 ~lk-pGG~LVYSTCS-l~~eEN-E~vV~-~~L~~~~~~ 334 (496)
+ +||++++.+-. +....+ +.-+. +++++..+.
T Consensus 348 --k~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~~~l~ 383 (542)
T 3lkd_A 348 --KQDNGVMAIVLPHGVLFRGNAEGTIRKALLEEGAID 383 (542)
T ss_dssp --CTTTCEEEEEEETHHHHCCTHHHHHHHHHHHTTCEE
T ss_pred --CCCceeEEEEecchHhhCCchhHHHHHHHHhCCcee
Confidence 9 99998776543 222233 44444 555555443
No 171
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.09 E-value=2.1e-10 Score=117.25 Aligned_cols=113 Identities=12% Similarity=0.090 Sum_probs=85.5
Q ss_pred cCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccccCCCCCCE
Q 011002 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~~~~~FD~ 252 (496)
+...++.+|||+|||+|..+..+++. +...|+|+|+++ +++.+++++..+|+ .++.++.+|+..++. +.+.||+
T Consensus 60 ~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~~D~ 134 (340)
T 2fyt_A 60 PHIFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL--PVEKVDV 134 (340)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC--SCSCEEE
T ss_pred hhhcCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC--CCCcEEE
Confidence 44567899999999999999988886 236899999996 99999999999998 579999999988752 3368999
Q ss_pred EEECCC-CCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 253 VLLDAP-CSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 253 VLlDpP-CSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
|++++. +.... .. ....+|..+.++| +|||+|+.+.|++
T Consensus 135 Ivs~~~~~~l~~-------------~~-------~~~~~l~~~~~~L----kpgG~lip~~~~~ 174 (340)
T 2fyt_A 135 IISEWMGYFLLF-------------ES-------MLDSVLYAKNKYL----AKGGSVYPDICTI 174 (340)
T ss_dssp EEECCCBTTBTT-------------TC-------HHHHHHHHHHHHE----EEEEEEESCEEEE
T ss_pred EEEcCchhhccC-------------HH-------HHHHHHHHHHhhc----CCCcEEEcccceE
Confidence 999762 21110 01 1123566666776 9999999555543
No 172
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.09 E-value=8.2e-10 Score=115.02 Aligned_cols=107 Identities=8% Similarity=0.105 Sum_probs=83.6
Q ss_pred CCcccccceEEEecCcch---hH---HHhcCCCCCCeEeecccCCcHHHHHHHHHcCC----------------------
Q 011002 151 ATPEYMAGFYMLQSASSF---LP---VMALAPQEKERVIDMAAAPGGKTTYIAALMKN---------------------- 202 (496)
Q Consensus 151 ~~~~~~~G~~~iQd~sS~---l~---v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~---------------------- 202 (496)
..+.++.||...|..+.+ ++ +.+....++..|||.|||+|++.+.+|....+
T Consensus 161 g~~LhkRgyr~~~~~Apl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w 240 (384)
T 3ldg_A 161 GPSLFKRGYRTEKGGAPIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALV 240 (384)
T ss_dssp SSCTTCCSCCCC---CCCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHH
T ss_pred CCcccccCcccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHH
Confidence 445677887766665442 22 33446778999999999999999988876543
Q ss_pred ---------------CcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCEEEECCCCC
Q 011002 203 ---------------TGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVLLDAPCS 260 (496)
Q Consensus 203 ---------------~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~VLlDpPCS 260 (496)
...|+|+|+|+.+++.++.|+..+|+.+ +.+.++|+..++.. ..||+|++|||+.
T Consensus 241 ~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~---~~fD~Iv~NPPYG 311 (384)
T 3ldg_A 241 TRVRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN---KINGVLISNPPYG 311 (384)
T ss_dssp HHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC---CCSCEEEECCCCT
T ss_pred HHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc---CCcCEEEECCchh
Confidence 1469999999999999999999999976 99999999887642 5899999999973
No 173
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.08 E-value=2.7e-10 Score=109.83 Aligned_cols=110 Identities=12% Similarity=0.074 Sum_probs=83.1
Q ss_pred HhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCC
Q 011002 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 172 ~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD 251 (496)
..+...++.+|||+|||+|..+..++... ...|+++|+++.+++.+++++. ..++.++.+|+..++. ..+.||
T Consensus 38 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~--~~~~fD 110 (253)
T 3g5l_A 38 KMLPDFNQKTVLDLGCGFGWHCIYAAEHG--AKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAI--EPDAYN 110 (253)
T ss_dssp TTCCCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCC--CTTCEE
T ss_pred HhhhccCCCEEEEECCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCC--CCCCeE
Confidence 34455688999999999999999998863 2389999999999999988765 4578999999987763 347899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
+|++.-. +..-+ ....+|..+.++| +|||+|++++.+
T Consensus 111 ~v~~~~~------l~~~~----------------~~~~~l~~~~~~L----kpgG~l~~~~~~ 147 (253)
T 3g5l_A 111 VVLSSLA------LHYIA----------------SFDDICKKVYINL----KSSGSFIFSVEH 147 (253)
T ss_dssp EEEEESC------GGGCS----------------CHHHHHHHHHHHE----EEEEEEEEEEEC
T ss_pred EEEEchh------hhhhh----------------hHHHHHHHHHHHc----CCCcEEEEEeCC
Confidence 9998421 11000 1234677888877 999999998543
No 174
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.08 E-value=4.9e-10 Score=107.01 Aligned_cols=131 Identities=11% Similarity=0.030 Sum_probs=96.8
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
++.+|||+|||+|..+..++. ....|+++|+++.+++.+++++...+. .++.++.+|+..++. ...||+|++.
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~fD~v~~~ 139 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP---TELFDLIFDY 139 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC---SSCEEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC---CCCeeEEEEC
Confidence 345999999999999988765 346899999999999999999987654 569999999988762 2689999974
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc-------CCHHHHHHHHH
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT-------ENEAVIDYALK 329 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~e-------ENE~vV~~~L~ 329 (496)
.... . ....+ ...+|..+.++| +|||+|+..+.+.... -..+.+..++.
T Consensus 140 ~~l~---~----------~~~~~-------~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 195 (235)
T 3lcc_A 140 VFFC---A----------IEPEM-------RPAWAKSMYELL----KPDGELITLMYPITDHVGGPPYKVDVSTFEEVLV 195 (235)
T ss_dssp SSTT---T----------SCGGG-------HHHHHHHHHHHE----EEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHG
T ss_pred hhhh---c----------CCHHH-------HHHHHHHHHHHC----CCCcEEEEEEecccccCCCCCccCCHHHHHHHHH
Confidence 3211 1 11111 235677788877 9999999887665332 24667777888
Q ss_pred hCCcEEeec
Q 011002 330 KRDVKLVPC 338 (496)
Q Consensus 330 ~~~~~lv~~ 338 (496)
..+++++.+
T Consensus 196 ~~Gf~~~~~ 204 (235)
T 3lcc_A 196 PIGFKAVSV 204 (235)
T ss_dssp GGTEEEEEE
T ss_pred HcCCeEEEE
Confidence 878877654
No 175
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.07 E-value=5.1e-10 Score=109.61 Aligned_cols=140 Identities=14% Similarity=0.069 Sum_probs=90.4
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcC--C------------------------
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG--V------------------------ 228 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g--~------------------------ 228 (496)
.+.+|.+|||+|||+|..+..++.. +...|+|+|+|+.+++.++++++... +
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 4567899999999999877655543 22479999999999999998876532 0
Q ss_pred ---ceEE-EEecCCCCCccc--cCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 011002 229 ---TNTI-VCNYDGNELPKV--LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANS 302 (496)
Q Consensus 229 ---~nv~-v~~~D~~~l~~~--~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~l 302 (496)
.++. ++.+|....... ...+.||+|++- ...+.+.........+|.++.++|
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~------------------~~l~~i~~~~~~~~~~l~~i~r~L---- 187 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTL------------------LAMECACCSLDAYRAALCNLASLL---- 187 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEE------------------SCHHHHCSSHHHHHHHHHHHHTTE----
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeeh------------------HHHHHhcCCHHHHHHHHHHHHHHc----
Confidence 1243 788898774211 113689999972 111111000112245677777876
Q ss_pred CCCcEEEEEeCCCCC------------cCCHHHHHHHHHhCCcEEeec
Q 011002 303 KSGGYIVYSTCSIMV------------TENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 303 kpGG~LVYSTCSl~~------------eENE~vV~~~L~~~~~~lv~~ 338 (496)
||||+|+.++..-.. -=.++.+..+|...+++++.+
T Consensus 188 KPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~ 235 (263)
T 2a14_A 188 KPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQL 235 (263)
T ss_dssp EEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEE
Confidence 999999999742110 014566677777777776654
No 176
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.07 E-value=1.3e-09 Score=98.60 Aligned_cols=106 Identities=14% Similarity=0.225 Sum_probs=80.5
Q ss_pred HhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCC
Q 011002 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 172 ~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD 251 (496)
..+.+.++.+|||+|||+|..+..++... ..|+++|+++.+++.++++ ..++.+...| ++ +..+.||
T Consensus 11 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d---~~--~~~~~~D 77 (170)
T 3i9f_A 11 PNIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-----FDSVITLSDP---KE--IPDNSVD 77 (170)
T ss_dssp HHHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-----CTTSEEESSG---GG--SCTTCEE
T ss_pred HhcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC---CC--CCCCceE
Confidence 44556789999999999999999998865 3899999999999999888 4578899888 22 2347899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
+|++....... + . ...+|..+.++| +|||+|+++++...
T Consensus 78 ~v~~~~~l~~~------~------~----------~~~~l~~~~~~L----~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 78 FILFANSFHDM------D------D----------KQHVISEVKRIL----KDDGRVIIIDWRKE 116 (170)
T ss_dssp EEEEESCSTTC------S------C----------HHHHHHHHHHHE----EEEEEEEEEEECSS
T ss_pred EEEEccchhcc------c------C----------HHHHHHHHHHhc----CCCCEEEEEEcCcc
Confidence 99985331110 1 0 134677788887 99999999876543
No 177
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.07 E-value=1.6e-10 Score=111.39 Aligned_cols=111 Identities=14% Similarity=0.112 Sum_probs=85.2
Q ss_pred HHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCC
Q 011002 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~ 249 (496)
.+..+.+.++.+|||+|||+|..+..++...+ .+.|+++|+++.+++.++++ ..++.+..+|+..++ . .+.
T Consensus 25 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~-~--~~~ 95 (259)
T 2p35_A 25 LLAQVPLERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK-P--AQK 95 (259)
T ss_dssp HHTTCCCSCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC-C--SSC
T ss_pred HHHhcCCCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC-c--cCC
Confidence 34445667889999999999999999999874 36899999999999999887 356889999998876 2 378
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
||+|++... .. +.. ....+|..+.++| +|||+|++++...
T Consensus 96 fD~v~~~~~---l~---------~~~----------~~~~~l~~~~~~L----~pgG~l~~~~~~~ 135 (259)
T 2p35_A 96 ADLLYANAV---FQ---------WVP----------DHLAVLSQLMDQL----ESGGVLAVQMPDN 135 (259)
T ss_dssp EEEEEEESC---GG---------GST----------THHHHHHHHGGGE----EEEEEEEEEEECC
T ss_pred cCEEEEeCc---hh---------hCC----------CHHHHHHHHHHhc----CCCeEEEEEeCCC
Confidence 999998432 11 100 1234677777776 9999999988543
No 178
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.07 E-value=6.6e-10 Score=103.40 Aligned_cols=126 Identities=13% Similarity=0.053 Sum_probs=93.3
Q ss_pred CCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEECCC
Q 011002 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAP 258 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDpP 258 (496)
+.+|||+|||+|..+..++.. ...|+|+|+++.+++.++++ ..++.++.+|+..++. ..+.||+|++...
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~--~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQT-----HPSVTFHHGTITDLSD--SPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGGG--SCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCccccccc--CCCCeEEEEehhh
Confidence 889999999999999999886 25899999999999999887 3468899999988763 3478999998431
Q ss_pred CCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC------------cCCHHHHHH
Q 011002 259 CSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV------------TENEAVIDY 326 (496)
Q Consensus 259 CSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~------------eENE~vV~~ 326 (496)
+.. ....+ ...+|..+.++| +|||+|+.+++.... .-..+.+..
T Consensus 112 ------l~~-------~~~~~-------~~~~l~~~~~~L----~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (203)
T 3h2b_A 112 ------LIH-------MGPGE-------LPDALVALRMAV----EDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQ 167 (203)
T ss_dssp ------STT-------CCTTT-------HHHHHHHHHHTE----EEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHH
T ss_pred ------Hhc-------CCHHH-------HHHHHHHHHHHc----CCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHH
Confidence 111 01011 234677778876 999999998865432 124566777
Q ss_pred HHHhCCcEEeec
Q 011002 327 ALKKRDVKLVPC 338 (496)
Q Consensus 327 ~L~~~~~~lv~~ 338 (496)
+|++.+++++.+
T Consensus 168 ~l~~~Gf~~~~~ 179 (203)
T 3h2b_A 168 ALETAGFQVTSS 179 (203)
T ss_dssp HHHHTTEEEEEE
T ss_pred HHHHCCCcEEEE
Confidence 777878777665
No 179
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.07 E-value=1.2e-09 Score=108.28 Aligned_cols=133 Identities=16% Similarity=0.171 Sum_probs=84.2
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeC-CHHHHHHHHHHH-----HHcCCc-----eEEEEecCCCCCccc
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEM-KASRLKSLTANL-----HRMGVT-----NTIVCNYDGNELPKV 244 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDi-s~~rl~~l~~nl-----~r~g~~-----nv~v~~~D~~~l~~~ 244 (496)
..+|.+|||+|||+|..++.++.. +.+.|+|+|+ ++.+++.++.|+ ..+|+. ++.+...|.......
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~--~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 154 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLA--GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDS 154 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHT--TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHH
T ss_pred hcCCCeEEEecccccHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHH
Confidence 357889999999999999988775 2358999999 899999999999 666664 677776664442111
Q ss_pred c----CCCCCCEEEE-CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCC---C--CcEEEEEeCC
Q 011002 245 L----GLNTVDRVLL-DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSK---S--GGYIVYSTCS 314 (496)
Q Consensus 245 ~----~~~~FD~VLl-DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lk---p--GG~LVYSTCS 314 (496)
+ ..+.||+|++ |+.+. ..+ ...++..+.++| + | ||+++.+.+.
T Consensus 155 ~~~~~~~~~fD~Ii~~dvl~~----------------~~~-------~~~ll~~l~~~L----k~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 155 LQRCTGLQRFQVVLLADLLSF----------------HQA-------HDALLRSVKMLL----ALPANDPTAVALVTFTH 207 (281)
T ss_dssp HHHHHSCSSBSEEEEESCCSC----------------GGG-------HHHHHHHHHHHB----CCTTTCTTCEEEEEECC
T ss_pred HHhhccCCCCCEEEEeCcccC----------------hHH-------HHHHHHHHHHHh----cccCCCCCCEEEEEEEe
Confidence 1 2368999987 66531 011 234566666765 8 8 9977665444
Q ss_pred CCC---cCCHHHHHHHHHhCC-cEEeec
Q 011002 315 IMV---TENEAVIDYALKKRD-VKLVPC 338 (496)
Q Consensus 315 l~~---eENE~vV~~~L~~~~-~~lv~~ 338 (496)
..+ ...+.++. .+.+.+ +++..+
T Consensus 208 ~~~~~~~~~~~~~~-~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 208 HRPHLAERDLAFFR-LVNADGALIAEPW 234 (281)
T ss_dssp --------CTHHHH-HHHHSTTEEEEEE
T ss_pred eecccchhHHHHHH-HHHhcCCEEEEEe
Confidence 322 22333443 556677 777654
No 180
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.06 E-value=3.6e-10 Score=111.06 Aligned_cols=111 Identities=20% Similarity=0.164 Sum_probs=84.5
Q ss_pred hhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCC
Q 011002 168 FLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGL 247 (496)
Q Consensus 168 ~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~ 247 (496)
..+...+.+.++.+|||+|||+|..+..++. ..+.|+|+|+|+.+++.+++++ .++.+..+|+..++. .
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~---~ 115 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRV---D 115 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCC---S
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCc---C
Confidence 3445667778899999999999999999988 3479999999999999998775 567888999988763 3
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
+.||+|++... .. +... ...+|..+.++| +|||+|++++...
T Consensus 116 ~~fD~v~~~~~---l~---------~~~d----------~~~~l~~~~~~L----kpgG~l~~~~~~~ 157 (279)
T 3ccf_A 116 KPLDAVFSNAM---LH---------WVKE----------PEAAIASIHQAL----KSGGRFVAEFGGK 157 (279)
T ss_dssp SCEEEEEEESC---GG---------GCSC----------HHHHHHHHHHHE----EEEEEEEEEEECT
T ss_pred CCcCEEEEcch---hh---------hCcC----------HHHHHHHHHHhc----CCCcEEEEEecCC
Confidence 78999998432 11 0001 134677778877 9999999987653
No 181
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.06 E-value=8.9e-10 Score=105.04 Aligned_cols=129 Identities=12% Similarity=0.072 Sum_probs=95.2
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
+.++.+|||+|||+|..+..++.. ...|+++|+++.+++.++++. ...++.++.+|+..++. ..+.||+|++
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~--~~~~fD~v~~ 122 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPF--ENEQFEAIMA 122 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSS--CTTCEEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCC--CCCCccEEEE
Confidence 457899999999999999999886 358999999999999988774 33568999999988763 3478999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc-----------------
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT----------------- 318 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~e----------------- 318 (496)
... +..-++ ...+|..+.++| +|||+|+.++......
T Consensus 123 ~~~------l~~~~~----------------~~~~l~~~~~~L----~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (242)
T 3l8d_A 123 INS------LEWTEE----------------PLRALNEIKRVL----KSDGYACIAILGPTAKPRENSYPRLYGKDVVCN 176 (242)
T ss_dssp ESC------TTSSSC----------------HHHHHHHHHHHE----EEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSC
T ss_pred cCh------HhhccC----------------HHHHHHHHHHHh----CCCeEEEEEEcCCcchhhhhhhhhhcccccccc
Confidence 322 111111 134677888887 9999999998543221
Q ss_pred -CCHHHHHHHHHhCCcEEeec
Q 011002 319 -ENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 319 -ENE~vV~~~L~~~~~~lv~~ 338 (496)
-....+..++...+++++..
T Consensus 177 ~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 177 TMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp CCCHHHHHHHHHHTTEEEEEE
T ss_pred CCCHHHHHHHHHHcCCEEEEe
Confidence 23345667777888887765
No 182
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.05 E-value=7.7e-10 Score=103.10 Aligned_cols=112 Identities=16% Similarity=0.050 Sum_probs=84.0
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
..++.+|||+|||+|..++.++... ...|+++|+|+.+++.+++++...+ .++.++.+|+..++ +..+.||+|++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~--~~~~~fD~v~~ 95 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKLP--FKDESMSFVYS 95 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSCC--SCTTCEEEEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhCC--CCCCceeEEEE
Confidence 4578999999999999865554432 3689999999999999999998877 46888899998876 33478999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
... +. ..... ....++..+.++| +|||++++++++..
T Consensus 96 ~~~------l~-------~~~~~-------~~~~~l~~~~~~L----kpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 96 YGT------IF-------HMRKN-------DVKEAIDEIKRVL----KPGGLACINFLTTK 132 (209)
T ss_dssp CSC------GG-------GSCHH-------HHHHHHHHHHHHE----EEEEEEEEEEEETT
T ss_pred cCh------HH-------hCCHH-------HHHHHHHHHHHHc----CCCcEEEEEEeccc
Confidence 422 10 11111 2345677888876 99999999998753
No 183
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.05 E-value=1.2e-10 Score=122.19 Aligned_cols=82 Identities=12% Similarity=0.052 Sum_probs=69.4
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~--g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
+|.+|||+|||+|..+++++.. .+.|+++|+|+.+++.+++|+..+ |+.++.++++|+..+........||+|++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 5899999999999999988875 368999999999999999999999 99889999999987522211247999999
Q ss_pred CCCCCCC
Q 011002 256 DAPCSGT 262 (496)
Q Consensus 256 DpPCSg~ 262 (496)
|||..+.
T Consensus 170 DPPrr~~ 176 (410)
T 3ll7_A 170 DPARRSG 176 (410)
T ss_dssp CCEEC--
T ss_pred CCCCcCC
Confidence 9998774
No 184
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.05 E-value=2.3e-10 Score=109.24 Aligned_cols=117 Identities=17% Similarity=0.200 Sum_probs=86.1
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC-CCccccC-CCCCCEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN-ELPKVLG-LNTVDRV 253 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~-~l~~~~~-~~~FD~V 253 (496)
+.++.+|||+|||+|..+..++.. ...|+++|+++.+++.++++ ..++.++++|+. .++ +. .+.||+|
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~--~~~~~~fD~v 115 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELP--AGLGAPFGLI 115 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCC--TTCCCCEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccC--CcCCCCEEEE
Confidence 467899999999999999998886 36899999999999999988 457889999984 444 22 4789999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCc
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDV 333 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~ 333 (496)
++.+. +..+|..+.++| +|||+|+..... .+...+...+...++
T Consensus 116 ~~~~~----------------------------~~~~l~~~~~~L----kpgG~l~~~~~~----~~~~~~~~~l~~~Gf 159 (226)
T 3m33_A 116 VSRRG----------------------------PTSVILRLPELA----APDAHFLYVGPR----LNVPEVPERLAAVGW 159 (226)
T ss_dssp EEESC----------------------------CSGGGGGHHHHE----EEEEEEEEEESS----SCCTHHHHHHHHTTC
T ss_pred EeCCC----------------------------HHHHHHHHHHHc----CCCcEEEEeCCc----CCHHHHHHHHHHCCC
Confidence 98521 112456666776 999999933222 234456677777776
Q ss_pred EEeec
Q 011002 334 KLVPC 338 (496)
Q Consensus 334 ~lv~~ 338 (496)
..+.+
T Consensus 160 ~~~~~ 164 (226)
T 3m33_A 160 DIVAE 164 (226)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 65543
No 185
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.04 E-value=3.2e-10 Score=113.82 Aligned_cols=125 Identities=18% Similarity=0.115 Sum_probs=84.8
Q ss_pred cCCCCCCeEeeccc------CCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEE-EecCCCCCccccC
Q 011002 174 LAPQEKERVIDMAA------APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIV-CNYDGNELPKVLG 246 (496)
Q Consensus 174 L~~~~g~~VLDlcA------GpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v-~~~D~~~l~~~~~ 246 (496)
+.+.+|.+|||+|| |||+ ..++.+++..+.|+|+|+++. +.++.+ +++|+..++.
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~~--- 120 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVHT--- 120 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCCC---
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCCc---
Confidence 45788999999999 7788 566777775689999999997 246778 9999987652
Q ss_pred CCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHH
Q 011002 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (496)
Q Consensus 247 ~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~ 326 (496)
.+.||+|++|+++...|....+.. .. ..+...+|..+.+.| +|||+|++.+... ...+ .+..
T Consensus 121 ~~~fD~Vvsn~~~~~~g~~~~d~~----~~-------~~l~~~~l~~a~r~L----kpGG~~v~~~~~~--~~~~-~l~~ 182 (290)
T 2xyq_A 121 ANKWDLIISDMYDPRTKHVTKEND----SK-------EGFFTYLCGFIKQKL----ALGGSIAVKITEH--SWNA-DLYK 182 (290)
T ss_dssp SSCEEEEEECCCCCC---CCSCCC----CC-------CTHHHHHHHHHHHHE----EEEEEEEEEECSS--SCCH-HHHH
T ss_pred cCcccEEEEcCCcccccccccccc----ch-------HHHHHHHHHHHHHhc----CCCcEEEEEEecc--CCHH-HHHH
Confidence 167999999988776665432210 00 012245688888887 9999999875332 3334 3444
Q ss_pred HHHhCCcE
Q 011002 327 ALKKRDVK 334 (496)
Q Consensus 327 ~L~~~~~~ 334 (496)
+++..++.
T Consensus 183 ~l~~~GF~ 190 (290)
T 2xyq_A 183 LMGHFSWW 190 (290)
T ss_dssp HHTTEEEE
T ss_pred HHHHcCCc
Confidence 56554443
No 186
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.04 E-value=4.3e-10 Score=110.90 Aligned_cols=92 Identities=18% Similarity=0.076 Sum_probs=74.0
Q ss_pred chhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCH-------HHHHHHHHHHHHcCCce-EEEEecCC
Q 011002 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKA-------SRLKSLTANLHRMGVTN-TIVCNYDG 238 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~-------~rl~~l~~nl~r~g~~n-v~v~~~D~ 238 (496)
..+...++.+.++.+|||+|||+|..++.+|.. .+.|+++|+++ .+++.+++|+..+|+.+ +.++++|+
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~ 148 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA 148 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH
Confidence 445556666677899999999999999999985 36899999999 99999999999998876 99999998
Q ss_pred CCCccccCC--CCCCEEEECCCCCC
Q 011002 239 NELPKVLGL--NTVDRVLLDAPCSG 261 (496)
Q Consensus 239 ~~l~~~~~~--~~FD~VLlDpPCSg 261 (496)
..+...+.. +.||+|++|||...
T Consensus 149 ~~~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 149 AEQMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHHHHHHCCCSEEEECCCC--
T ss_pred HHHHHhhhccCCCccEEEECCCCCC
Confidence 775322222 57999999998643
No 187
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.04 E-value=8e-10 Score=116.71 Aligned_cols=113 Identities=12% Similarity=0.090 Sum_probs=83.6
Q ss_pred HhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHH-------HHHHHHcC--CceEEEEecCCCCCc
Q 011002 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSL-------TANLHRMG--VTNTIVCNYDGNELP 242 (496)
Q Consensus 172 ~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l-------~~nl~r~g--~~nv~v~~~D~~~l~ 242 (496)
..+.+.+|.+|||+|||+|..++.+|...+. ..|+|+|+++.+++.+ +.++..+| +.++.++.+|....+
T Consensus 236 ~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~-~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~ 314 (433)
T 1u2z_A 236 QQCQLKKGDTFMDLGSGVGNCVVQAALECGC-ALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDN 314 (433)
T ss_dssp HHTTCCTTCEEEEESCTTSHHHHHHHHHHCC-SEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTC
T ss_pred HhcCCCCCCEEEEeCCCcCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccc
Confidence 4567789999999999999999999998753 5899999999998888 99999999 578999988765321
Q ss_pred ccc--CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 243 KVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 243 ~~~--~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
..+ ..+.||+|+++..+. . .++ ...|..+.+.| +|||+||.+.
T Consensus 315 ~~~~~~~~~FDvIvvn~~l~---------------~-~d~-------~~~L~el~r~L----KpGG~lVi~d 359 (433)
T 1u2z_A 315 NRVAELIPQCDVILVNNFLF---------------D-EDL-------NKKVEKILQTA----KVGCKIISLK 359 (433)
T ss_dssp HHHHHHGGGCSEEEECCTTC---------------C-HHH-------HHHHHHHHTTC----CTTCEEEESS
T ss_pred cccccccCCCCEEEEeCccc---------------c-ccH-------HHHHHHHHHhC----CCCeEEEEee
Confidence 100 126799999864321 0 111 22355666665 9999998763
No 188
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.04 E-value=5.5e-10 Score=112.20 Aligned_cols=137 Identities=13% Similarity=0.110 Sum_probs=92.0
Q ss_pred ccccceEEEecCc-----chhH--HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc
Q 011002 154 EYMAGFYMLQSAS-----SFLP--VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM 226 (496)
Q Consensus 154 ~~~~G~~~iQd~s-----S~l~--v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~ 226 (496)
.+..|...+.... .+++ +++.. ..+.+|||+|||+|+.+..++... +...|+++|+|+.+++.+++++..+
T Consensus 53 L~ldg~~~~~~~de~~Y~e~l~~~~l~~~-~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~ 130 (294)
T 3adn_A 53 MALDGVVQTTERDEFIYHEMMTHVPLLAH-GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNH 130 (294)
T ss_dssp EEETTEEEEETTTHHHHHHHHHHHHHHHS-TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHH
T ss_pred EEECCeEeeccCchhHHHHHHHHHHHhcC-CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhc
Confidence 4556666555433 1221 22223 346799999999999999988753 3468999999999999999998875
Q ss_pred C-----CceEEEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhc
Q 011002 227 G-----VTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDAN 301 (496)
Q Consensus 227 g-----~~nv~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~ 301 (496)
+ -.++.++.+|+..+... ..+.||+|++|+|.. .| |.. .-...+++..+.+.|
T Consensus 131 ~~~~~~~~rv~~~~~D~~~~l~~-~~~~fDvIi~D~~~p-~~-----~~~------------~l~~~~f~~~~~~~L--- 188 (294)
T 3adn_A 131 NAGSYDDPRFKLVIDDGVNFVNQ-TSQTFDVIISDCTDP-IG-----PGE------------SLFTSAFYEGCKRCL--- 188 (294)
T ss_dssp HSSCTTCTTCCEECSCSCC---C-CCCCEEEEEECC----------------------------CCHHHHHHHHHTE---
T ss_pred ccccccCCceEEEEChHHHHHhh-cCCCccEEEECCCCc-cC-----cch------------hccHHHHHHHHHHhc---
Confidence 3 34689999999876432 237899999998731 11 000 001245677777776
Q ss_pred CCCCcEEEEEeCCC
Q 011002 302 SKSGGYIVYSTCSI 315 (496)
Q Consensus 302 lkpGG~LVYSTCSl 315 (496)
+|||+|+..++|.
T Consensus 189 -kpgG~lv~~~~s~ 201 (294)
T 3adn_A 189 -NPGGIFVAQNGVC 201 (294)
T ss_dssp -EEEEEEEEEEEEC
T ss_pred -CCCCEEEEecCCc
Confidence 9999999887664
No 189
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.03 E-value=2.9e-10 Score=116.54 Aligned_cols=113 Identities=11% Similarity=0.049 Sum_probs=87.2
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
+.++.+|||+|||+|..+..++.. +...|+|+|+| .+++.+++++..+|+.+ +.++.+|+..++. +.+.||+|+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~fD~Ii 138 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVEL--PVEKVDIII 138 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCC--SSSCEEEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccC--CCCceEEEE
Confidence 457899999999999999999886 34699999999 59999999999999977 9999999988753 347899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
++++...... .. ....++..+.++| +|||+|+.+.+++.
T Consensus 139 s~~~~~~l~~------------~~-------~~~~~l~~~~r~L----kpgG~li~~~~~~~ 177 (349)
T 3q7e_A 139 SEWMGYCLFY------------ES-------MLNTVLHARDKWL----APDGLIFPDRATLY 177 (349)
T ss_dssp ECCCBBTBTB------------TC-------CHHHHHHHHHHHE----EEEEEEESCEEEEE
T ss_pred EccccccccC------------ch-------hHHHHHHHHHHhC----CCCCEEccccceEE
Confidence 9875322110 00 0123566666776 99999987776643
No 190
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.02 E-value=7.7e-10 Score=106.76 Aligned_cols=140 Identities=14% Similarity=0.095 Sum_probs=94.7
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC--------------------------
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-------------------------- 228 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-------------------------- 228 (496)
...++.+|||+|||+|..+..++.... ..|+++|+++.+++.+++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEE 130 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHH
Confidence 345788999999999999888775421 4899999999999999998866431
Q ss_pred ---ceE-EEEecCCCCCccc--cCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 011002 229 ---TNT-IVCNYDGNELPKV--LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANS 302 (496)
Q Consensus 229 ---~nv-~v~~~D~~~l~~~--~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~l 302 (496)
.++ .+...|+...... ...+.||+|++.- + ...+.........+|..+.++|
T Consensus 131 ~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~------~------------l~~~~~~~~~~~~~l~~~~~~L---- 188 (265)
T 2i62_A 131 KLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTL------C------------LDAACPDLPAYRTALRNLGSLL---- 188 (265)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEES------C------------HHHHCSSHHHHHHHHHHHHTTE----
T ss_pred HhhhhheeEEEeeeccCCCCCccccCCccEEEEhh------h------------hhhhcCChHHHHHHHHHHHhhC----
Confidence 126 7888998875421 1126899999731 1 1100001123355678888876
Q ss_pred CCCcEEEEEeCCC------------CCcCCHHHHHHHHHhCCcEEeec
Q 011002 303 KSGGYIVYSTCSI------------MVTENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 303 kpGG~LVYSTCSl------------~~eENE~vV~~~L~~~~~~lv~~ 338 (496)
+|||+|++++..- ...-+++.+..+|.+.+++++.+
T Consensus 189 kpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 236 (265)
T 2i62_A 189 KPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQF 236 (265)
T ss_dssp EEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEE
T ss_pred CCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEE
Confidence 9999999887421 11125566777777778777654
No 191
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.02 E-value=1.1e-09 Score=105.29 Aligned_cols=109 Identities=18% Similarity=0.123 Sum_probs=83.4
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
...++.+|||+|||+|..+..++.. ...|+++|+|+.+++.+++++...+. ++.++++|+..++. .+.||+|+
T Consensus 38 ~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~---~~~fD~v~ 110 (252)
T 1wzn_A 38 AKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAF---KNEFDAVT 110 (252)
T ss_dssp CSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCC---CSCEEEEE
T ss_pred cccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhccc---CCCccEEE
Confidence 3457889999999999999999875 35899999999999999999998886 68899999987653 26899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTC 313 (496)
+... .... .+.. ....+|..+.++| +|||.|+..+.
T Consensus 111 ~~~~--~~~~----------~~~~-------~~~~~l~~~~~~L----~pgG~li~~~~ 146 (252)
T 1wzn_A 111 MFFS--TIMY----------FDEE-------DLRKLFSKVAEAL----KPGGVFITDFP 146 (252)
T ss_dssp ECSS--GGGG----------SCHH-------HHHHHHHHHHHHE----EEEEEEEEEEE
T ss_pred EcCC--chhc----------CCHH-------HHHHHHHHHHHHc----CCCeEEEEecc
Confidence 7311 1111 1111 2355678888877 99999997653
No 192
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.02 E-value=9.5e-10 Score=102.55 Aligned_cols=115 Identities=14% Similarity=0.157 Sum_probs=82.5
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
.+.++.+|||+|||+|..+..++.. +...|+++|+++.+++.+++|+. ++.++++|+..++ +.||+|+
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~-----~~~D~v~ 115 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS-----GKYDTWI 115 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC-----CCEEEEE
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC-----CCeeEEE
Confidence 4567899999999999999999876 33579999999999999999876 6789999988764 5799999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCC
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRD 332 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~ 332 (496)
+|||..... . .....++..+++.+ |. +|+.|.. .....+...+...+
T Consensus 116 ~~~p~~~~~--------------~------~~~~~~l~~~~~~~-------g~-~~~~~~~---~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 116 MNPPFGSVV--------------K------HSDRAFIDKAFETS-------MW-IYSIGNA---KARDFLRREFSARG 162 (200)
T ss_dssp ECCCC---------------------------CHHHHHHHHHHE-------EE-EEEEEEG---GGHHHHHHHHHHHE
T ss_pred ECCCchhcc--------------C------chhHHHHHHHHHhc-------Cc-EEEEEcC---chHHHHHHHHHHCC
Confidence 999953221 0 11134577777753 33 6666743 33455555565554
No 193
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.01 E-value=4e-10 Score=107.11 Aligned_cols=126 Identities=10% Similarity=0.097 Sum_probs=91.4
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.++.+|||+|||+|..+..++... ..|+++|+++.+++.+++++.. ++.++.+|+..++ ..+.||+|++.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~~---~~~~fD~v~~~ 110 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD----GITYIHSRFEDAQ---LPRRYDNIVLT 110 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGCC---CSSCEEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHcC---cCCcccEEEEh
Confidence 467899999999999999888753 3799999999999999887643 7889999987763 24789999973
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHH-HhhhhcCCCCcEEEEEeCCCCC------------------
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAI-DMVDANSKSGGYIVYSTCSIMV------------------ 317 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~-~~L~~~lkpGG~LVYSTCSl~~------------------ 317 (496)
+++..-+ . ...+|..+. ++| +|||+|+.++.....
T Consensus 111 ------~~l~~~~------~----------~~~~l~~~~~~~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (250)
T 2p7i_A 111 ------HVLEHID------D----------PVALLKRINDDWL----AEGGRLFLVCPNANAVSRQIAVKMGIISHNSAV 164 (250)
T ss_dssp ------SCGGGCS------S----------HHHHHHHHHHTTE----EEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCC
T ss_pred ------hHHHhhc------C----------HHHHHHHHHHHhc----CCCCEEEEEcCChHHHHHHHHHHcCccccchhc
Confidence 1221111 1 134677777 776 999999998844321
Q ss_pred -----------cCCHHHHHHHHHhCCcEEeec
Q 011002 318 -----------TENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 318 -----------eENE~vV~~~L~~~~~~lv~~ 338 (496)
.-..+.+..+|+..+++++.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 196 (250)
T 2p7i_A 165 TEAEFAHGHRCTYALDTLERDASRAGLQVTYR 196 (250)
T ss_dssp CHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred ccccccccccccCCHHHHHHHHHHCCCeEEEE
Confidence 114456667777778777664
No 194
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.01 E-value=1.1e-09 Score=104.27 Aligned_cols=108 Identities=16% Similarity=0.174 Sum_probs=82.1
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.++.+|||+|||+|..+..++.. ..|+++|+++.+++.+++++...+ .++.++.+|+..++. . +.||+|++.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~--~-~~fD~v~~~ 103 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELEL--P-EPVDAITIL 103 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCCC--S-SCEEEEEEC
T ss_pred CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcCC--C-CCcCEEEEe
Confidence 45789999999999999888765 689999999999999999998887 468889999887653 2 689999985
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
..+ + .+..+.. ....+|..+.++| +|||+|++++.+
T Consensus 104 ~~~-----~------~~~~~~~-------~~~~~l~~~~~~L----~pgG~l~~~~~~ 139 (243)
T 3d2l_A 104 CDS-----L------NYLQTEA-------DVKQTFDSAARLL----TDGGKLLFDVHS 139 (243)
T ss_dssp TTG-----G------GGCCSHH-------HHHHHHHHHHHHE----EEEEEEEEEEEC
T ss_pred CCc-----h------hhcCCHH-------HHHHHHHHHHHhc----CCCeEEEEEcCC
Confidence 311 1 0111112 2245677788876 999999987755
No 195
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.01 E-value=4.2e-10 Score=113.28 Aligned_cols=112 Identities=11% Similarity=0.104 Sum_probs=77.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc------eEEEEecCCC------CCcccc
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT------NTIVCNYDGN------ELPKVL 245 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~------nv~v~~~D~~------~l~~~~ 245 (496)
+|.+|||+|||+|+.+..++.. ..+.|+|+|+|+.+++.++++....+.. ++.+...|.. .++..+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 5889999999999866655442 3368999999999999999998887754 3566677762 222223
Q ss_pred CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
..+.||+|+|-- .+ .+.+...+ +..+|.++.++| ||||+|+.+|+.
T Consensus 126 ~~~~FD~V~~~~-----~l-------hy~~~~~~-------~~~~l~~~~r~L----kpGG~~i~~~~~ 171 (302)
T 2vdw_A 126 YFGKFNIIDWQF-----AI-------HYSFHPRH-------YATVMNNLSELT----ASGGKVLITTMD 171 (302)
T ss_dssp CSSCEEEEEEES-----CG-------GGTCSTTT-------HHHHHHHHHHHE----EEEEEEEEEEEC
T ss_pred cCCCeeEEEECc-----hH-------HHhCCHHH-------HHHHHHHHHHHc----CCCCEEEEEeCC
Confidence 347899998621 11 11111111 135688888887 999999998865
No 196
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.01 E-value=3.3e-10 Score=115.02 Aligned_cols=113 Identities=14% Similarity=0.120 Sum_probs=85.4
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~V 253 (496)
...++.+|||+|||+|..+..+++. +...|+|+|++ .+++.+++++..+|+.+ +.++.+|+..++. +.+.||+|
T Consensus 35 ~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~~D~I 109 (328)
T 1g6q_1 35 DLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL--PFPKVDII 109 (328)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC--SSSCEEEE
T ss_pred hhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC--CCCcccEE
Confidence 3457889999999999999988875 33589999999 69999999999999864 9999999988753 23689999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
+++++...... ... ...+|..+.++| +|||+|+.+++++
T Consensus 110 vs~~~~~~l~~------------~~~-------~~~~l~~~~~~L----kpgG~li~~~~~~ 148 (328)
T 1g6q_1 110 ISEWMGYFLLY------------ESM-------MDTVLYARDHYL----VEGGLIFPDKCSI 148 (328)
T ss_dssp EECCCBTTBST------------TCC-------HHHHHHHHHHHE----EEEEEEESCEEEE
T ss_pred EEeCchhhccc------------HHH-------HHHHHHHHHhhc----CCCeEEEEeeceE
Confidence 99877432210 000 123456666666 9999998666654
No 197
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.01 E-value=2.7e-09 Score=104.57 Aligned_cols=112 Identities=11% Similarity=0.045 Sum_probs=80.2
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH-----------------cCCceEEEEecC
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHR-----------------MGVTNTIVCNYD 237 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r-----------------~g~~nv~v~~~D 237 (496)
.+.++.+|||+|||+|..+..||.. +..|+|+|+|+.+++.++++... ....+|.++++|
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D 141 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS 141 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence 3457899999999999999999986 24899999999999998766531 012579999999
Q ss_pred CCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 238 GNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 238 ~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
+..++... .+.||+|++... ...+ ... ....++..+.++| +|||+|++.|..
T Consensus 142 ~~~l~~~~-~~~FD~V~~~~~---l~~l----------~~~-------~~~~~l~~~~~~L----kpGG~l~l~~~~ 193 (252)
T 2gb4_A 142 IFDLPRAN-IGKFDRIWDRGA---LVAI----------NPG-------DHDRYADIILSLL----RKEFQYLVAVLS 193 (252)
T ss_dssp TTTGGGGC-CCCEEEEEESSS---TTTS----------CGG-------GHHHHHHHHHHTE----EEEEEEEEEEEE
T ss_pred cccCCccc-CCCEEEEEEhhh---hhhC----------CHH-------HHHHHHHHHHHHc----CCCeEEEEEEEe
Confidence 99876421 268999996321 1111 111 1234577777776 999999876644
No 198
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.99 E-value=5.6e-10 Score=114.26 Aligned_cols=115 Identities=15% Similarity=0.110 Sum_probs=86.5
Q ss_pred HhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccccCCCCC
Q 011002 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 172 ~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~~~~~F 250 (496)
..+...++.+|||+|||+|..+..++.. +.+.|+|+|+++ +++.++++++.+|+ .++.++.+|+..++. .+.|
T Consensus 44 ~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~---~~~~ 117 (348)
T 2y1w_A 44 QNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL---PEQV 117 (348)
T ss_dssp HTGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC---SSCE
T ss_pred hccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC---CCce
Confidence 3344568899999999999999988875 346999999996 88999999999998 579999999988752 2679
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 251 D~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
|+|+++++....+ + .. ....+..+.++| +|||.|+.+++++.
T Consensus 118 D~Ivs~~~~~~~~----~---------~~-------~~~~l~~~~~~L----kpgG~li~~~~~~~ 159 (348)
T 2y1w_A 118 DIIISEPMGYMLF----N---------ER-------MLESYLHAKKYL----KPSGNMFPTIGDVH 159 (348)
T ss_dssp EEEEECCCBTTBT----T---------TS-------HHHHHHHGGGGE----EEEEEEESCEEEEE
T ss_pred eEEEEeCchhcCC----h---------HH-------HHHHHHHHHhhc----CCCeEEEEecCcEE
Confidence 9999987632211 0 00 122345555665 99999998777754
No 199
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.99 E-value=4.4e-10 Score=108.36 Aligned_cols=105 Identities=16% Similarity=0.154 Sum_probs=82.0
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
.+.++.+|||+|||+|..+..++.. .+.|+|+|+|+.+++.+++++ ..+..++.++.+|+..++ +..+.||+|+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~--~~~~~fD~v~ 109 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIP--LPDESVHGVI 109 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCC--SCTTCEEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCC--CCCCCeeEEE
Confidence 5678899999999999999988875 368999999999999999998 445578999999998776 3347899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
+... +. +.. ....+|..+.++| +|||+|+.+
T Consensus 110 ~~~~------l~------~~~----------~~~~~l~~~~~~L----~pgG~l~~~ 140 (263)
T 2yqz_A 110 VVHL------WH------LVP----------DWPKVLAEAIRVL----KPGGALLEG 140 (263)
T ss_dssp EESC------GG------GCT----------THHHHHHHHHHHE----EEEEEEEEE
T ss_pred ECCc------hh------hcC----------CHHHHHHHHHHHC----CCCcEEEEE
Confidence 8422 10 000 1134677888887 999999887
No 200
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.99 E-value=4.6e-10 Score=116.21 Aligned_cols=113 Identities=16% Similarity=0.098 Sum_probs=86.7
Q ss_pred cCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCE
Q 011002 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~ 252 (496)
+...++.+|||+|||+|..+..++.. +...|+|+|++ .+++.+++++..+|+.+ +.++.+|+..++. + +.||+
T Consensus 59 ~~~~~~~~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~-~~~D~ 132 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGSGILAIWSAQA--GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL--P-EKVDV 132 (376)
T ss_dssp TTTTTTCEEEEESCTTTHHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC--S-SCEEE
T ss_pred cccCCCCEEEEeccCcCHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc--C-CcceE
Confidence 34568899999999999999999886 23589999999 99999999999999976 9999999987753 2 78999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
|++++...... +. . ....++..+.++| +|||+|+.+.+++
T Consensus 133 Iv~~~~~~~l~----~e--------~-------~~~~~l~~~~~~L----kpgG~li~~~~~~ 172 (376)
T 3r0q_C 133 IISEWMGYFLL----RE--------S-------MFDSVISARDRWL----KPTGVMYPSHARM 172 (376)
T ss_dssp EEECCCBTTBT----TT--------C-------THHHHHHHHHHHE----EEEEEEESSEEEE
T ss_pred EEEcChhhccc----ch--------H-------HHHHHHHHHHhhC----CCCeEEEEecCeE
Confidence 99987322110 00 0 0123466666766 9999999877763
No 201
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.99 E-value=5.7e-10 Score=112.27 Aligned_cols=115 Identities=15% Similarity=0.169 Sum_probs=83.5
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc----CCceEEEEecCCCCCccccCCCCCCE
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM----GVTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~----g~~nv~v~~~D~~~l~~~~~~~~FD~ 252 (496)
.++.+|||+|||+|+.+..++... +...|+++|+++.+++.+++++..+ .-.++.++.+|+..++.....+.||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 467899999999999999988753 3469999999999999999987542 23569999999987653212478999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
|++|++... + |. .. -.+.+++..+.++| +|||+|+..+.+
T Consensus 173 Ii~d~~~~~-~-----~~-------~~-----l~~~~~l~~~~~~L----kpgG~lv~~~~~ 212 (304)
T 3bwc_A 173 VIIDTTDPA-G-----PA-------SK-----LFGEAFYKDVLRIL----KPDGICCNQGES 212 (304)
T ss_dssp EEEECC---------------------------CCHHHHHHHHHHE----EEEEEEEEEECC
T ss_pred EEECCCCcc-c-----cc-------hh-----hhHHHHHHHHHHhc----CCCcEEEEecCC
Confidence 999987311 1 00 00 01245677777876 999999987654
No 202
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.99 E-value=3e-10 Score=107.36 Aligned_cols=108 Identities=12% Similarity=0.118 Sum_probs=79.7
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCCCCCCEEEE
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
.+.++|||+|||+|..++.++...+. ..|+|+|+|+.+++.+++|+.++|+. ++.+ .|.... ...+.||+||+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~-a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~---~~~~~~DvVLa 121 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEK-IIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD---VYKGTYDVVFL 121 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCC-CEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH---HTTSEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCC-CEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc---CCCCCcChhhH
Confidence 45789999999999999988877665 49999999999999999999999998 6777 444322 23378999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEE-EeCCCC
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY-STCSIM 316 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVY-STCSl~ 316 (496)
- .+.++...++..+...++.| +|||.+|- =|-|+.
T Consensus 122 ~----------------------k~LHlL~~~~~al~~v~~~L----~pggvfISfptksl~ 157 (200)
T 3fzg_A 122 L----------------------KMLPVLKQQDVNILDFLQLF----HTQNFVISFPIKSLS 157 (200)
T ss_dssp E----------------------TCHHHHHHTTCCHHHHHHTC----EEEEEEEEEECCCCC
T ss_pred h----------------------hHHHhhhhhHHHHHHHHHHh----CCCCEEEEeChHHhc
Confidence 1 12222244444566778876 99998763 344553
No 203
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.98 E-value=2e-09 Score=104.45 Aligned_cols=104 Identities=13% Similarity=0.075 Sum_probs=77.7
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.++.+|||+|||+|..+..++.. ...|+++|+|+.+++.+++++. ++.++.+|+..++. .+.||+|++.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~~~---~~~fD~v~~~ 117 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP-----DAVLHHGDMRDFSL---GRRFSAVTCM 117 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTCCC---SCCEEEEEEC
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC-----CCEEEECChHHCCc---cCCcCEEEEc
Confidence 45789999999999999988775 2589999999999999988753 67899999988764 3789999984
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTC 313 (496)
.. ++. +..+.. ....+|..+.++| +|||+|+.++.
T Consensus 118 ~~-----~l~------~~~~~~-------~~~~~l~~~~~~L----~pgG~l~i~~~ 152 (263)
T 3pfg_A 118 FS-----SIG------HLAGQA-------ELDAALERFAAHV----LPDGVVVVEPW 152 (263)
T ss_dssp TT-----GGG------GSCHHH-------HHHHHHHHHHHTE----EEEEEEEECCC
T ss_pred Cc-----hhh------hcCCHH-------HHHHHHHHHHHhc----CCCcEEEEEec
Confidence 21 111 111111 2245677788876 99999998643
No 204
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.97 E-value=2.2e-09 Score=102.91 Aligned_cols=104 Identities=17% Similarity=0.129 Sum_probs=76.3
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
..++.+|||+|||+|..+..++.. ...|+++|+|+.+++.++++ +.++..|+..+...+..+.||+|++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~~~~fD~i~~ 107 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLPDKYLDGVMI 107 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSCTTCBSEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcCCCCeeEEEE
Confidence 467899999999999999999886 24799999999999988876 5677888766422234578999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
. +++.. ....+ ...+|..+.++| +|||+|+.++..
T Consensus 108 ~------~~l~~-------~~~~~-------~~~~l~~~~~~L----kpgG~l~~~~~~ 142 (240)
T 3dli_A 108 S------HFVEH-------LDPER-------LFELLSLCYSKM----KYSSYIVIESPN 142 (240)
T ss_dssp E------SCGGG-------SCGGG-------HHHHHHHHHHHB----CTTCCEEEEEEC
T ss_pred C------Cchhh-------CCcHH-------HHHHHHHHHHHc----CCCcEEEEEeCC
Confidence 3 22211 11111 134677777876 999999998765
No 205
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.97 E-value=4e-09 Score=117.78 Aligned_cols=110 Identities=17% Similarity=0.159 Sum_probs=84.3
Q ss_pred CCCcccccceEEEecCcch---h---HHHhcCCCCCCeEeecccCCcHHHHHHHHHcC----------------------
Q 011002 150 GATPEYMAGFYMLQSASSF---L---PVMALAPQEKERVIDMAAAPGGKTTYIAALMK---------------------- 201 (496)
Q Consensus 150 ~~~~~~~~G~~~iQd~sS~---l---~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~---------------------- 201 (496)
...+.++.||-..+..+.+ + .+.+....++..|||.|||+|++.+.+|....
T Consensus 156 sg~~LhkRgyr~~~~~apl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~ 235 (703)
T 3v97_A 156 SGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEA 235 (703)
T ss_dssp SSSCTTCCSSSCSSCCCSSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHH
T ss_pred CCCccccccccccCCCCCCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHH
Confidence 3445677776555554432 2 23344567899999999999999998877642
Q ss_pred -------------------CCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCEEEECCCC
Q 011002 202 -------------------NTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (496)
Q Consensus 202 -------------------~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~VLlDpPC 259 (496)
....|+|+|+++.+++.++.|+.+.|+.+ |.+.++|+..+......+.||+|++|||+
T Consensus 236 ~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPY 313 (703)
T 3v97_A 236 IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPY 313 (703)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHhhhccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCc
Confidence 12479999999999999999999999987 99999999887433322389999999998
No 206
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.97 E-value=1e-08 Score=102.94 Aligned_cols=116 Identities=20% Similarity=0.129 Sum_probs=89.1
Q ss_pred hcCC--CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCC
Q 011002 173 ALAP--QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 173 ~L~~--~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~ 249 (496)
.+.. .++.+|||+|||+|..+..++...++ ..++++|++ .+++.+++++...|+.+ +.+..+|+...+. + ..
T Consensus 158 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~-~~ 232 (335)
T 2r3s_A 158 LVNENKIEPLKVLDISASHGLFGIAVAQHNPN-AEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY--G-ND 232 (335)
T ss_dssp HHTC--CCCSEEEEETCTTCHHHHHHHHHCTT-CEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC--C-SC
T ss_pred hcccccCCCCEEEEECCCcCHHHHHHHHHCCC-CeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC--C-CC
Confidence 3455 67899999999999999999998753 699999999 99999999999999864 9999999977532 2 45
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~ 317 (496)
||+|++.-. ...++..+ ...+|..+.+.| +|||+|+..+.....
T Consensus 233 ~D~v~~~~~-------------l~~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 233 YDLVLLPNF-------------LHHFDVAT-------CEQLLRKIKTAL----AVEGKVIVFDFIPNS 276 (335)
T ss_dssp EEEEEEESC-------------GGGSCHHH-------HHHHHHHHHHHE----EEEEEEEEEECCCCT
T ss_pred CcEEEEcch-------------hccCCHHH-------HHHHHHHHHHhC----CCCcEEEEEeecCCC
Confidence 999998211 11122222 245788888887 999999988766543
No 207
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.97 E-value=1.1e-08 Score=104.62 Aligned_cols=113 Identities=20% Similarity=0.147 Sum_probs=87.5
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCCCC
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~~~ 249 (496)
+..+...++.+|||+|||+|..+..++...+ ...++++|+ +.+++.+++++...|+. +|.++.+|+.+. ++ ..
T Consensus 175 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~-~~ 248 (374)
T 1qzz_A 175 ADAYDWSAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP---LP-VT 248 (374)
T ss_dssp HHTSCCTTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CS-CC
T ss_pred HHhCCCCCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc---CC-CC
Confidence 3445667889999999999999999999875 468999999 99999999999999986 699999998652 11 34
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTC 313 (496)
||+|++... + ..+...+ ...+|..+.+.| +|||+|+.++.
T Consensus 249 ~D~v~~~~v------l-------~~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~ 288 (374)
T 1qzz_A 249 ADVVLLSFV------L-------LNWSDED-------ALTILRGCVRAL----EPGGRLLVLDR 288 (374)
T ss_dssp EEEEEEESC------G-------GGSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEC
T ss_pred CCEEEEecc------c-------cCCCHHH-------HHHHHHHHHHhc----CCCcEEEEEec
Confidence 999998421 1 1122221 245788888887 99999998876
No 208
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.96 E-value=5.1e-10 Score=106.64 Aligned_cols=111 Identities=16% Similarity=0.126 Sum_probs=83.4
Q ss_pred HHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCC
Q 011002 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~ 249 (496)
+...+...++.+|||+|||+|..+..++.. +...|+++|+++.+++.+++++.. .++.++.+|+..++ +..+.
T Consensus 35 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~--~~~~~ 107 (243)
T 3bkw_A 35 LRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLH--LPQDS 107 (243)
T ss_dssp HHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCC--CCTTC
T ss_pred HHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhcc--CCCCC
Confidence 445566678999999999999999998886 224899999999999999877643 36889999988765 23478
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTC 313 (496)
||+|++... +..-+ ....+|..+.++| +|||+|++++.
T Consensus 108 fD~v~~~~~------l~~~~----------------~~~~~l~~~~~~L----~pgG~l~~~~~ 145 (243)
T 3bkw_A 108 FDLAYSSLA------LHYVE----------------DVARLFRTVHQAL----SPGGHFVFSTE 145 (243)
T ss_dssp EEEEEEESC------GGGCS----------------CHHHHHHHHHHHE----EEEEEEEEEEE
T ss_pred ceEEEEecc------ccccc----------------hHHHHHHHHHHhc----CcCcEEEEEeC
Confidence 999998432 11000 1234677888877 99999999873
No 209
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.96 E-value=4.2e-10 Score=111.39 Aligned_cols=109 Identities=15% Similarity=0.103 Sum_probs=72.9
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHH---HHcCCceEEEE--ecCCCCCccccCCCCC
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANL---HRMGVTNTIVC--NYDGNELPKVLGLNTV 250 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl---~r~g~~nv~v~--~~D~~~l~~~~~~~~F 250 (496)
+.+|.+|||+|||||++|.++++. +.|+|+|+++ ++..+.++. ..+| .++.++ ++|+..++ .+.|
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l~----~~~f 141 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYG-WNIVKFKSRVDIHTLP----VERT 141 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTT-GGGEEEECSCCTTTSC----CCCC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccC-CCeEEEecccCHhHCC----CCCC
Confidence 568999999999999999988876 6799999998 322111110 0111 167888 89998876 2689
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc--EEEEEeCC
Q 011002 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG--YIVYSTCS 314 (496)
Q Consensus 251 D~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG--~LVYSTCS 314 (496)
|+|++|.. ..+|. +. +.... +..+|..+.++| +||| .++..+..
T Consensus 142 D~V~sd~~-~~~~~----~~---------~d~~~--~l~~L~~~~r~L----kpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 142 DVIMCDVG-ESSPK----WS---------VESER--TIKILELLEKWK----VKNPSADFVVKVLC 187 (265)
T ss_dssp SEEEECCC-CCCSC----HH---------HHHHH--HHHHHHHHHHHH----HHCTTCEEEEEESC
T ss_pred cEEEEeCc-ccCCc----cc---------hhHHH--HHHHHHHHHHHh----ccCCCeEEEEEeCC
Confidence 99999976 33332 10 11110 112677777776 9999 89886644
No 210
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.96 E-value=1.7e-09 Score=107.02 Aligned_cols=114 Identities=13% Similarity=0.073 Sum_probs=76.1
Q ss_pred HHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCC
Q 011002 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~ 249 (496)
....+.+.+|.+|||+|||+|..+..++.. .+.|+|+|+|+.+++.+++++... +-++.+...+.. .+... .+.
T Consensus 37 il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~-~~~~~-~~~ 110 (261)
T 3iv6_A 37 DIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAE-IPKEL-AGH 110 (261)
T ss_dssp HHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSC-CCGGG-TTC
T ss_pred HHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc-cceeeeeecccc-ccccc-CCC
Confidence 445667789999999999999999999885 368999999999999999998665 222333222220 11111 368
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
||+|+++... ..+...+ ...++..+.++ | |||+|+.|..-
T Consensus 111 fD~Vv~~~~l-------------~~~~~~~-------~~~~l~~l~~l----L-PGG~l~lS~~~ 150 (261)
T 3iv6_A 111 FDFVLNDRLI-------------NRFTTEE-------ARRACLGMLSL----V-GSGTVRASVKL 150 (261)
T ss_dssp CSEEEEESCG-------------GGSCHHH-------HHHHHHHHHHH----H-TTSEEEEEEEB
T ss_pred ccEEEEhhhh-------------HhCCHHH-------HHHHHHHHHHh----C-cCcEEEEEecc
Confidence 9999986531 0112222 23345555554 6 99999987543
No 211
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.96 E-value=7.2e-10 Score=113.31 Aligned_cols=118 Identities=15% Similarity=0.204 Sum_probs=86.7
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CC--ceEEEEecCCCCCccccCCCCCC
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV--TNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~--g~--~nv~v~~~D~~~l~~~~~~~~FD 251 (496)
...+.+|||+|||+|+.+..++... +...|+++|+|+.+++.+++++..+ |+ .++.++.+|+..+......+.||
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 3456899999999999999988764 3469999999999999999998864 44 46999999987653222236899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
+|++|++.. .+. + .. ....+++..+.++| +|||.|+..+.+..
T Consensus 197 lIi~d~~~p-~~~----~--------~~-----l~~~~~l~~~~~~L----kpgG~lv~~~~~~~ 239 (334)
T 1xj5_A 197 AVIVDSSDP-IGP----A--------KE-----LFEKPFFQSVARAL----RPGGVVCTQAESLW 239 (334)
T ss_dssp EEEECCCCT-TSG----G--------GG-----GGSHHHHHHHHHHE----EEEEEEEEECCCTT
T ss_pred EEEECCCCc-cCc----c--------hh-----hhHHHHHHHHHHhc----CCCcEEEEecCCcc
Confidence 999998621 110 0 00 01245677788877 99999999765543
No 212
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.95 E-value=2.1e-09 Score=100.73 Aligned_cols=104 Identities=15% Similarity=0.070 Sum_probs=75.3
Q ss_pred cCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCC---ccccCCCCC
Q 011002 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL---PKVLGLNTV 250 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l---~~~~~~~~F 250 (496)
+...++.+|||+|||+|..+..++.. ...|+++|+++.+++.++++ .++.+...|...+ +. .....|
T Consensus 48 ~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~-~~~~~f 117 (227)
T 3e8s_A 48 ILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKV-PVGKDY 117 (227)
T ss_dssp HHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCS-CCCCCE
T ss_pred hhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhccccc-ccCCCc
Confidence 33456799999999999999988876 35899999999999998887 3455666666554 21 223469
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 251 D~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
|+|++..... .++ ...+|..+.++| +|||+|++++..
T Consensus 118 D~v~~~~~l~-------~~~----------------~~~~l~~~~~~L----~pgG~l~~~~~~ 154 (227)
T 3e8s_A 118 DLICANFALL-------HQD----------------IIELLSAMRTLL----VPGGALVIQTLH 154 (227)
T ss_dssp EEEEEESCCC-------SSC----------------CHHHHHHHHHTE----EEEEEEEEEECC
T ss_pred cEEEECchhh-------hhh----------------HHHHHHHHHHHh----CCCeEEEEEecC
Confidence 9999854321 111 124577777776 999999998864
No 213
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.95 E-value=4.8e-10 Score=110.49 Aligned_cols=123 Identities=15% Similarity=0.086 Sum_probs=86.5
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC----ceEEEEecCCCCCccc-c
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV----TNTIVCNYDGNELPKV-L 245 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~----~nv~v~~~D~~~l~~~-~ 245 (496)
...+...++.+|||+|||+|..+..++.. ...|+|+|+|+.+++.+++++...+. .++.+..+|+..++.. +
T Consensus 50 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (293)
T 3thr_A 50 LGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVP 126 (293)
T ss_dssp HHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSC
T ss_pred HHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccc
Confidence 34445567899999999999999999886 24899999999999999998865443 4578888888776511 2
Q ss_pred CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
..+.||+|++... ++..-++... +. .....+|..+.++| +|||+|+.++++
T Consensus 127 ~~~~fD~V~~~g~-----~l~~~~~~~~--~~-------~~~~~~l~~~~~~L----kpgG~l~~~~~~ 177 (293)
T 3thr_A 127 AGDGFDAVICLGN-----SFAHLPDSKG--DQ-------SEHRLALKNIASMV----RPGGLLVIDHRN 177 (293)
T ss_dssp CTTCEEEEEECTT-----CGGGSCCSSS--SS-------HHHHHHHHHHHHTE----EEEEEEEEEEEC
T ss_pred cCCCeEEEEEcCh-----HHhhcCcccc--CH-------HHHHHHHHHHHHHc----CCCeEEEEEeCC
Confidence 3478999998311 1111111000 00 12345788888887 999999998876
No 214
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.95 E-value=1.4e-09 Score=116.48 Aligned_cols=112 Identities=14% Similarity=0.103 Sum_probs=83.4
Q ss_pred cCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccccCCCCCCE
Q 011002 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~~~~~FD~ 252 (496)
+...++.+|||+|||+|..++.++.. +...|+|+|+++ +++.+++++..+|+ .+|.++.+|+.+++. .+.||+
T Consensus 154 l~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~---~~~fD~ 227 (480)
T 3b3j_A 154 HTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL---PEQVDI 227 (480)
T ss_dssp GGGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC---SSCEEE
T ss_pred hhhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc---CCCeEE
Confidence 34457889999999999999988873 346999999998 99999999999999 569999999987642 258999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
|++++|-. . +.. ......+..+.++| +|||+|+.+.+++
T Consensus 228 Ivs~~~~~----~---------~~~-------e~~~~~l~~~~~~L----kpgG~li~~~~~~ 266 (480)
T 3b3j_A 228 IISEPMGY----M---------LFN-------ERMLESYLHAKKYL----KPSGNMFPTIGDV 266 (480)
T ss_dssp EECCCCHH----H---------HTC-------HHHHHHHHHGGGGE----EEEEEEESCEEEE
T ss_pred EEEeCchH----h---------cCc-------HHHHHHHHHHHHhc----CCCCEEEEEecee
Confidence 99987610 0 000 11123445555665 9999999665553
No 215
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.95 E-value=4.8e-10 Score=111.67 Aligned_cols=106 Identities=13% Similarity=0.061 Sum_probs=73.1
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc------eEEEE--ecCCCCCccccCC
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT------NTIVC--NYDGNELPKVLGL 247 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~------nv~v~--~~D~~~l~~~~~~ 247 (496)
+.+|.+|||+|||||++|..+++. +.|+|+|+++ ++..+.+ .... ++.++ .+|+..++ .
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~----~~~~~~~~~~~v~~~~~~~D~~~l~----~ 146 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHE----KPRLVETFGWNLITFKSKVDVTKME----P 146 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSC----CCCCCCCTTGGGEEEECSCCGGGCC----C
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhh----chhhhhhcCCCeEEEeccCcHhhCC----C
Confidence 468999999999999999998876 6799999998 4322111 1222 68888 89988765 2
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc--EEEEEeCC
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG--YIVYSTCS 314 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG--~LVYSTCS 314 (496)
+.||+|++|.. ..+|. +. +.... +..+|..+.++| +||| .++..+.+
T Consensus 147 ~~fD~Vvsd~~-~~~~~----~~---------~d~~~--~l~~L~~~~r~L----kpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 147 FQADTVLCDIG-ESNPT----AA---------VEASR--TLTVLNVISRWL----EYNQGCGFCVKVLN 195 (276)
T ss_dssp CCCSEEEECCC-CCCSC----HH---------HHHHH--HHHHHHHHHHHH----HHSTTCEEEEEESC
T ss_pred CCcCEEEECCC-cCCCc----hh---------hhHHH--HHHHHHHHHHHh----ccCCCcEEEEEeCC
Confidence 68999999976 33331 10 10110 112677777776 9999 99886654
No 216
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.94 E-value=1.1e-09 Score=104.24 Aligned_cols=107 Identities=14% Similarity=0.157 Sum_probs=81.9
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEECC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDp 257 (496)
++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++...+. ++.++.+|+..++. . +.||+|++..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~--~-~~fD~v~~~~ 109 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNI--N-RKFDLITCCL 109 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCC--S-CCEEEEEECT
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCc--c-CCceEEEEcC
Confidence 7889999999999999988876 25899999999999999999998887 78899999887653 2 6899999843
Q ss_pred CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 011002 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 258 PCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTC 313 (496)
- ++. +..+.. ....+|..+.++| +|||+|+.++.
T Consensus 110 ~-----~l~------~~~~~~-------~~~~~l~~~~~~L----~pgG~l~~~~~ 143 (246)
T 1y8c_A 110 D-----STN------YIIDSD-------DLKKYFKAVSNHL----KEGGVFIFDIN 143 (246)
T ss_dssp T-----GGG------GCCSHH-------HHHHHHHHHHTTE----EEEEEEEEEEE
T ss_pred c-----ccc------ccCCHH-------HHHHHHHHHHHhc----CCCcEEEEEec
Confidence 0 110 001111 2245677777776 99999998654
No 217
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.94 E-value=3.1e-09 Score=106.28 Aligned_cols=114 Identities=14% Similarity=0.136 Sum_probs=83.1
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc-------CCceEEEEecCCCCCcc--cc--
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-------GVTNTIVCNYDGNELPK--VL-- 245 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~-------g~~nv~v~~~D~~~l~~--~~-- 245 (496)
.++.+|||+|||+|..+..++.. +...|+++|+++.+++.+++++... +..++.++++|+..++. .+
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 110 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD 110 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc
Confidence 36789999999999999988873 3469999999999999999998876 44579999999987641 11
Q ss_pred CCCCCCEEEECCCCCCCCcccCCchhhcc-CCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 246 GLNTVDRVLLDAPCSGTGVISKDESVKTS-KSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~-~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
..+.||+|++.-. +.|. .+.. ....+|..+.++| +|||+|+.+|...
T Consensus 111 ~~~~fD~V~~~~~------------l~~~~~~~~-------~~~~~l~~~~~~L----kpgG~li~~~~~~ 158 (313)
T 3bgv_A 111 PQMCFDICSCQFV------------CHYSFESYE-------QADMMLRNACERL----SPGGYFIGTTPNS 158 (313)
T ss_dssp TTCCEEEEEEETC------------GGGGGGSHH-------HHHHHHHHHHTTE----EEEEEEEEEEECH
T ss_pred CCCCEEEEEEecc------------hhhccCCHH-------HHHHHHHHHHHHh----CCCcEEEEecCCh
Confidence 2358999997321 0111 1111 1245677777876 9999999987653
No 218
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.94 E-value=2.2e-10 Score=124.37 Aligned_cols=165 Identities=18% Similarity=0.112 Sum_probs=107.9
Q ss_pred ceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCC--------------CcEEEEEeCCHHHHHHHHHHH
Q 011002 158 GFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKN--------------TGLIYANEMKASRLKSLTANL 223 (496)
Q Consensus 158 G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~--------------~g~V~AvDis~~rl~~l~~nl 223 (496)
|.|+--..-+.+.+.++.+.++ +|||.|||+|++.+.++..+.. ...|+|+|+++..+..++.|+
T Consensus 225 G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl 303 (544)
T 3khk_A 225 GQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNM 303 (544)
T ss_dssp TTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHH
T ss_pred CeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHH
Confidence 4444333445667778888877 9999999999998887665421 357999999999999999999
Q ss_pred HHcCCce-EEEEecCCCCCccccCCCCCCEEEECCCCCCCCcc----cCCchhhcc--------CCHHHHHHHHHHHHHH
Q 011002 224 HRMGVTN-TIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVI----SKDESVKTS--------KSLEDIQKCSYLQKQL 290 (496)
Q Consensus 224 ~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi----~r~p~i~~~--------~s~~~i~~l~~lQ~~L 290 (496)
...|+.. +.+.++|....+.. ....||+|++|||++..... ..++...+. ..+. ...+..+
T Consensus 304 ~l~gi~~~i~i~~gDtL~~~~~-~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~-----~~~~~~F 377 (544)
T 3khk_A 304 VIRGIDFNFGKKNADSFLDDQH-PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPT-----GNANFAW 377 (544)
T ss_dssp HHTTCCCBCCSSSCCTTTSCSC-TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCT-----TCTHHHH
T ss_pred HHhCCCcccceeccchhcCccc-ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCC-----cchhHHH
Confidence 9999853 44478887655432 23689999999999864321 112211111 0000 0112346
Q ss_pred HHHHHHhhhhcCCCCcEEEEEeCC-C-CCc-CCHHHHH-HHHHhCCc
Q 011002 291 ILAAIDMVDANSKSGGYIVYSTCS-I-MVT-ENEAVID-YALKKRDV 333 (496)
Q Consensus 291 L~~A~~~L~~~lkpGG~LVYSTCS-l-~~e-ENE~vV~-~~L~~~~~ 333 (496)
+.+++++| +|||++++.+-. + +.. -.+..+. +++++..+
T Consensus 378 l~~~l~~L----k~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~l 420 (544)
T 3khk_A 378 MLHMLYHL----APTGSMALLLANGSMSSNTNNEGEIRKTLVEQDLV 420 (544)
T ss_dssp HHHHHHTE----EEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTCE
T ss_pred HHHHHHHh----ccCceEEEEecchhhhcCcchHHHHHHHHHhCCcH
Confidence 88888987 999998877633 2 222 2444555 55555443
No 219
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.93 E-value=8.4e-10 Score=109.92 Aligned_cols=115 Identities=16% Similarity=0.225 Sum_probs=85.9
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcC----CceEEEEecCCCCCccccCCCCCCE
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG----VTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g----~~nv~v~~~D~~~l~~~~~~~~FD~ 252 (496)
.++.+|||+|||+|+.+..++... +...|+++|+++.+++.+++++..++ -.++.++.+|+..+.... .+.||+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~ 154 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-TNTYDV 154 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-CSCEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC-CCCceE
Confidence 456899999999999999888653 34799999999999999999987653 357999999997653222 368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
|++|++.. .| |.. .+ ...+++..+.++| +|||+|+..+++.
T Consensus 155 Ii~d~~~~-~~-----~~~-------~l-----~~~~~l~~~~~~L----~pgG~lv~~~~~~ 195 (283)
T 2i7c_A 155 IIVDSSDP-IG-----PAE-------TL-----FNQNFYEKIYNAL----KPNGYCVAQCESL 195 (283)
T ss_dssp EEEECCCT-TT-----GGG-------GG-----SSHHHHHHHHHHE----EEEEEEEEECCCT
T ss_pred EEEcCCCC-CC-----cch-------hh-----hHHHHHHHHHHhc----CCCcEEEEECCCc
Confidence 99998642 11 100 00 1135677777776 9999999988764
No 220
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.93 E-value=6e-10 Score=108.60 Aligned_cols=107 Identities=17% Similarity=0.124 Sum_probs=81.0
Q ss_pred HHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCC
Q 011002 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~ 249 (496)
+...+.+.++.+|||+|||+|..+..++. ..+.|+|+|+|+.+++.++.+. ++.++.+|+..++ +..+.
T Consensus 26 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~--~~~~~ 94 (261)
T 3ege_A 26 IINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLA--LPDKS 94 (261)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCC--SCTTC
T ss_pred HHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCC--CCCCC
Confidence 34556677899999999999999999986 3479999999999887665543 7899999998876 33478
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
||+|++.... ..+ .....+|..+.++| + ||++++.++.
T Consensus 95 fD~v~~~~~l---~~~-------------------~~~~~~l~~~~~~L----k-gG~~~~~~~~ 132 (261)
T 3ege_A 95 VDGVISILAI---HHF-------------------SHLEKSFQEMQRII----R-DGTIVLLTFD 132 (261)
T ss_dssp BSEEEEESCG---GGC-------------------SSHHHHHHHHHHHB----C-SSCEEEEEEC
T ss_pred EeEEEEcchH---hhc-------------------cCHHHHHHHHHHHh----C-CcEEEEEEcC
Confidence 9999984321 100 11235678888887 9 9999888876
No 221
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.93 E-value=3.2e-09 Score=118.85 Aligned_cols=117 Identities=13% Similarity=0.094 Sum_probs=88.1
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc------CCceEEEEecCCCCCccc
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM------GVTNTIVCNYDGNELPKV 244 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~------g~~nv~v~~~D~~~l~~~ 244 (496)
...+...++.+|||+|||+|..+..|+...++...|+|+|+++.+++.+++++... |+.++.++.+|+..++..
T Consensus 714 LelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~ 793 (950)
T 3htx_A 714 LKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSR 793 (950)
T ss_dssp HHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTT
T ss_pred HHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcc
Confidence 34445568999999999999999999887544469999999999999999987643 677899999999988753
Q ss_pred cCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 245 LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 245 ~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
.+.||+|++. +++.. ... .....++..+.++| +|| .|+.+|+.
T Consensus 794 --d~sFDlVV~~------eVLeH-------L~d-------p~l~~~L~eI~RvL----KPG-~LIISTPN 836 (950)
T 3htx_A 794 --LHDVDIGTCL------EVIEH-------MEE-------DQACEFGEKVLSLF----HPK-LLIVSTPN 836 (950)
T ss_dssp --SCSCCEEEEE------SCGGG-------SCH-------HHHHHHHHHHHHTT----CCS-EEEEEECB
T ss_pred --cCCeeEEEEe------Cchhh-------CCh-------HHHHHHHHHHHHHc----CCC-EEEEEecC
Confidence 3789999982 22211 111 11234677778876 998 88888865
No 222
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.91 E-value=1.4e-09 Score=110.26 Aligned_cols=116 Identities=18% Similarity=0.186 Sum_probs=83.6
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CC--ceEEEEecCCCCCccccCCCCCCE
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV--TNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~--g~--~nv~v~~~D~~~l~~~~~~~~FD~ 252 (496)
..+.+|||+|||+|+.+..++... +.+.|+++|+++.+++.+++++..+ |+ .++.++.+|+..+... ..+.||+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD~ 184 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HKNEFDV 184 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CTTCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh-cCCCceE
Confidence 345799999999999999988754 3479999999999999999998765 43 4699999998764321 2368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
|++|++.. .+ |. .. ....+++..+.++| +|||.|+..+.+..
T Consensus 185 Ii~d~~~~-~~-----~~-------~~-----l~t~~~l~~~~~~L----kpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 185 IITDSSDP-VG-----PA-------ES-----LFGQSYYELLRDAL----KEDGILSSQGESVW 226 (314)
T ss_dssp EEECCC-------------------------------HHHHHHHHE----EEEEEEEEECCCTT
T ss_pred EEEcCCCC-CC-----cc-------hh-----hhHHHHHHHHHhhc----CCCeEEEEECCCcc
Confidence 99998631 11 00 00 01245677788876 99999999876543
No 223
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.90 E-value=4.1e-09 Score=104.53 Aligned_cols=113 Identities=16% Similarity=0.089 Sum_probs=83.8
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CC--ceEEEEecCCCCCccccCCCCCCEE
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV--TNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~--g~--~nv~v~~~D~~~l~~~~~~~~FD~V 253 (496)
.+.+|||+|||.|+.+..++... +...|+++|+++.+++.+++++..+ ++ .++.++.+|+..+.... .+.||+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~fD~I 152 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS-ENQYDVI 152 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC-CSCEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-CCCeeEE
Confidence 46799999999999999888653 3469999999999999999998653 33 46999999997643211 3689999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
++|+|.. .+. +... . ..+++..+.+.| +|||.|+..+.+
T Consensus 153 i~d~~~~-~~~----~~~l--~-----------~~~~~~~~~~~L----~pgG~lv~~~~~ 191 (275)
T 1iy9_A 153 MVDSTEP-VGP----AVNL--F-----------TKGFYAGIAKAL----KEDGIFVAQTDN 191 (275)
T ss_dssp EESCSSC-CSC----CCCC--S-----------TTHHHHHHHHHE----EEEEEEEEECCC
T ss_pred EECCCCC-CCc----chhh--h-----------HHHHHHHHHHhc----CCCcEEEEEcCC
Confidence 9999852 221 1000 0 123567777776 999999998765
No 224
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.90 E-value=1.4e-09 Score=112.13 Aligned_cols=122 Identities=12% Similarity=0.090 Sum_probs=86.7
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcC---Cc-----eEEEEecCCCCCcccc--CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG---VT-----NTIVCNYDGNELPKVL--GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g---~~-----nv~v~~~D~~~l~~~~--~~ 247 (496)
.+.+|||+|+|.|+.+..++... ...|+++|+++.+++.+++++..++ +. ++.++.+|+..+.... ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 46899999999999998887753 3789999999999999999976442 22 5899999998875421 23
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~ 317 (496)
+.||+|++|||-...|. .| ..+. -....+.++..+.++| +|||.|+.-+||.+.
T Consensus 266 ~~fDvII~D~~d~P~~~---~p--------~~L~-t~eFy~~~~~~~~~~L----~pgGilv~qs~s~~~ 319 (364)
T 2qfm_A 266 REFDYVINDLTAVPIST---SP--------EEDS-TWEFLRLILDLSMKVL----KQDGKYFTQGNCVNL 319 (364)
T ss_dssp CCEEEEEEECCSSCCCC---C------------C-HHHHHHHHHHHHHHTE----EEEEEEEEEEEETTC
T ss_pred CCceEEEECCCCcccCc---Cc--------hhhh-HHHHHHHHHHHHHhhC----CCCcEEEEEcCCcch
Confidence 68999999997411111 11 1110 1223344555556766 999999999999876
No 225
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.90 E-value=3.9e-08 Score=100.90 Aligned_cols=115 Identities=9% Similarity=0.034 Sum_probs=87.6
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCCCCCCEEEE
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
..+.+|||+|||+|..+..+++..++ ..++++|+ +.+++.+++++...|+. +|.++.+|+......++ +.||+|++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~ 254 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKE-VEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWM 254 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTT-CEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCC-CEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEE
Confidence 45689999999999999999998754 68999999 99999999999998884 69999999987420122 68999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~e 318 (496)
-- + ...|+..+ ...+|.++.+.| +|||+|+.....+...
T Consensus 255 ~~------v-------lh~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~~~~ 293 (363)
T 3dp7_A 255 SQ------F-------LDCFSEEE-------VISILTRVAQSI----GKDSKVYIMETLWDRQ 293 (363)
T ss_dssp ES------C-------STTSCHHH-------HHHHHHHHHHHC----CTTCEEEEEECCTTSC
T ss_pred ec------h-------hhhCCHHH-------HHHHHHHHHHhc----CCCcEEEEEeeccCCc
Confidence 21 1 11233222 245688888886 9999999988765443
No 226
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.90 E-value=4.9e-08 Score=98.46 Aligned_cols=113 Identities=12% Similarity=0.058 Sum_probs=86.8
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccccCCCCCCEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~~~~~FD~V 253 (496)
+..++.+|||+|||+|..+..++...++ ..++++|+ +.+++.+++++...|+ .+|.+..+|+.. + .+ ..||+|
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~--~p-~~~D~v 239 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAHED-LSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-P--LP-AGAGGY 239 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C--CC-CSCSEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHCCC-CeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-C--CC-CCCcEE
Confidence 4456789999999999999999998754 68999999 9999999999999998 469999999862 2 22 379999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~ 317 (496)
++-- + ...+... ...++|.++.+.| +|||+|+.....+..
T Consensus 240 ~~~~------v-------lh~~~~~-------~~~~~l~~~~~~L----~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 240 VLSA------V-------LHDWDDL-------SAVAILRRCAEAA----GSGGVVLVIEAVAGD 279 (332)
T ss_dssp EEES------C-------GGGSCHH-------HHHHHHHHHHHHH----TTTCEEEEEECCCC-
T ss_pred EEeh------h-------hccCCHH-------HHHHHHHHHHHhc----CCCCEEEEEeecCCC
Confidence 9721 1 1123322 2356788888887 999999998766543
No 227
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.90 E-value=1.6e-09 Score=109.14 Aligned_cols=115 Identities=16% Similarity=0.183 Sum_probs=83.7
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CC--ceEEEEecCCCCCccccCCCCCCE
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV--TNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~--g~--~nv~v~~~D~~~l~~~~~~~~FD~ 252 (496)
..+.+|||+|||+|+.+..++... +...|+++|+++.+++.+++++..+ ++ .++.++.+|+..+... ..+.||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~fD~ 171 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ-NQDAFDV 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT-CSSCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh-CCCCceE
Confidence 456899999999999999988763 3479999999999999999998762 33 5699999998764221 2368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
|++|+|... + |. . .....+++..+.++| +|||.|+..+.+.
T Consensus 172 Ii~d~~~~~-~-----~~-------~-----~l~~~~~l~~~~~~L----kpgG~lv~~~~~~ 212 (304)
T 2o07_A 172 IITDSSDPM-G-----PA-------E-----SLFKESYYQLMKTAL----KEDGVLCCQGECQ 212 (304)
T ss_dssp EEEECC-----------------------------CHHHHHHHHHE----EEEEEEEEEEECT
T ss_pred EEECCCCCC-C-----cc-------h-----hhhHHHHHHHHHhcc----CCCeEEEEecCCc
Confidence 999987321 1 00 0 011345677788877 9999999887553
No 228
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.90 E-value=3.1e-09 Score=106.90 Aligned_cols=94 Identities=13% Similarity=0.069 Sum_probs=77.0
Q ss_pred EEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC
Q 011002 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (496)
Q Consensus 160 ~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~ 239 (496)
|.+...-....+..+.+.++++|||+|||+|..|..|+.. .+.|+|+|+|+.+++.+++++. +..++.++++|+.
T Consensus 32 fL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l 106 (295)
T 3gru_A 32 FLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDAL 106 (295)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchh
Confidence 5444333344566778889999999999999999999987 3689999999999999999987 4568999999998
Q ss_pred CCccccCCCCCCEEEECCCCC
Q 011002 240 ELPKVLGLNTVDRVLLDAPCS 260 (496)
Q Consensus 240 ~l~~~~~~~~FD~VLlDpPCS 260 (496)
.++.. ...||+|+.|+|+.
T Consensus 107 ~~~~~--~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 107 KVDLN--KLDFNKVVANLPYQ 125 (295)
T ss_dssp TSCGG--GSCCSEEEEECCGG
T ss_pred hCCcc--cCCccEEEEeCccc
Confidence 87532 25799999999964
No 229
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.89 E-value=6.1e-09 Score=99.85 Aligned_cols=111 Identities=12% Similarity=0.079 Sum_probs=82.2
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc---CCCCCC
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---GLNTVD 251 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~---~~~~FD 251 (496)
.+.++.+|||+|||+|..+..++.... .|+++|+|+.+++.+++++ ...++.++++|+..++... ....||
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccccccCcc
Confidence 357889999999999999999998753 7999999999999999877 3347899999998764321 012499
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
+|++...... ....+ ...+|..+.++| +|||+|+.++.+.
T Consensus 127 ~v~~~~~~~~-------------~~~~~-------~~~~l~~~~~~L----kpgG~l~i~~~~~ 166 (245)
T 3ggd_A 127 NIYMRTGFHH-------------IPVEK-------RELLGQSLRILL----GKQGAMYLIELGT 166 (245)
T ss_dssp EEEEESSSTT-------------SCGGG-------HHHHHHHHHHHH----TTTCEEEEEEECT
T ss_pred EEEEcchhhc-------------CCHHH-------HHHHHHHHHHHc----CCCCEEEEEeCCc
Confidence 9998643211 11111 244677888887 9999998887654
No 230
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.88 E-value=2.8e-08 Score=101.41 Aligned_cols=116 Identities=16% Similarity=0.114 Sum_probs=89.2
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCC
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~ 249 (496)
+..++..++.+|||+|||+|..+..++...+ ...++++|+ +.+++.+++++...|+.+ +.++.+|+...+ + ..
T Consensus 183 ~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~--~~ 256 (359)
T 1x19_A 183 LEEAKLDGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKES--Y--PE 256 (359)
T ss_dssp HHHCCCTTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSC--C--CC
T ss_pred HHhcCCCCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCC--C--CC
Confidence 3445667889999999999999999999875 368999999 999999999999999876 999999998764 2 34
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
+|+|++.-. ...+... ....+|..+.+.| +|||+|+..+....
T Consensus 257 ~D~v~~~~v-------------lh~~~d~-------~~~~~l~~~~~~L----~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 257 ADAVLFCRI-------------LYSANEQ-------LSTIMCKKAFDAM----RSGGRLLILDMVID 299 (359)
T ss_dssp CSEEEEESC-------------GGGSCHH-------HHHHHHHHHHTTC----CTTCEEEEEEECCC
T ss_pred CCEEEEech-------------hccCCHH-------HHHHHHHHHHHhc----CCCCEEEEEecccC
Confidence 599998321 1122221 1345688888876 99999988776543
No 231
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.88 E-value=1e-10 Score=113.62 Aligned_cols=96 Identities=13% Similarity=0.107 Sum_probs=77.8
Q ss_pred EEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC
Q 011002 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (496)
Q Consensus 160 ~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~ 239 (496)
|..+.......+..+.+.++.+|||+|||+|..|..++... +.|+|+|+|+.+++.+++++. +..++.++++|+.
T Consensus 11 fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~ 85 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDIL 85 (245)
T ss_dssp BCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCT
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc--cCCceEEEECChh
Confidence 55555555666777888899999999999999999999873 689999999999998888775 4468999999998
Q ss_pred CCccccCCCCCCEEEECCCCCCC
Q 011002 240 ELPKVLGLNTVDRVLLDAPCSGT 262 (496)
Q Consensus 240 ~l~~~~~~~~FD~VLlDpPCSg~ 262 (496)
.++... .+.| .|++|||+..+
T Consensus 86 ~~~~~~-~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 86 QFQFPN-KQRY-KIVGNIPYHLS 106 (245)
T ss_dssp TTTCCC-SSEE-EEEEECCSSSC
T ss_pred hcCccc-CCCc-EEEEeCCcccc
Confidence 876211 2568 89999998765
No 232
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.88 E-value=1.1e-09 Score=111.28 Aligned_cols=115 Identities=17% Similarity=0.246 Sum_probs=84.8
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CC--ceEEEEecCCCCCccccCCCCCCE
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV--TNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~--g~--~nv~v~~~D~~~l~~~~~~~~FD~ 252 (496)
..+.+|||+|||+|+.+..++...+ ...|+++|+|+.+++.+++++..+ ++ .++.++.+|+..+.... .+.||+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fDv 192 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-TNTYDV 192 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-CSCEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc-CCCceE
Confidence 3568999999999999999887543 479999999999999999998763 23 46999999987643211 368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
|++|++.. .| |.. .+ ...+++..+.+.| +|||+|++.+.+.
T Consensus 193 Ii~d~~~p-~~-----~~~-------~l-----~~~~~l~~~~~~L----kpgG~lv~~~~~~ 233 (321)
T 2pt6_A 193 IIVDSSDP-IG-----PAE-------TL-----FNQNFYEKIYNAL----KPNGYCVAQCESL 233 (321)
T ss_dssp EEEECCCS-SS-----GGG-------GG-----SSHHHHHHHHHHE----EEEEEEEEEECCT
T ss_pred EEECCcCC-CC-----cch-------hh-----hHHHHHHHHHHhc----CCCcEEEEEcCCc
Confidence 99998631 11 110 00 1145677777876 9999999987653
No 233
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.87 E-value=3.6e-09 Score=100.48 Aligned_cols=106 Identities=13% Similarity=0.115 Sum_probs=79.8
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.++.+|||+|||+|..+..++.... .|+++|+++.+++.+++++ .++.++.+|+..++. .+.||+|++-
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~---~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRL---GRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCC---SSCEEEEEEC
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHccc---CCCCcEEEEc
Confidence 5688999999999999999998753 7999999999999998874 457889999988763 3789999951
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
.+++. +..+.. ....+|..+.++| +|||+|+.+++..
T Consensus 108 -----~~~~~------~~~~~~-------~~~~~l~~~~~~L----~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 108 -----FSSVG------YLKTTE-------ELGAAVASFAEHL----EPGGVVVVEPWWF 144 (239)
T ss_dssp -----TTGGG------GCCSHH-------HHHHHHHHHHHTE----EEEEEEEECCCCC
T ss_pred -----CchHh------hcCCHH-------HHHHHHHHHHHhc----CCCeEEEEEeccC
Confidence 11111 111111 2245678888876 9999999987765
No 234
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.87 E-value=2.2e-09 Score=105.69 Aligned_cols=103 Identities=10% Similarity=0.100 Sum_probs=77.2
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEECC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDp 257 (496)
.+.+|||+|||+|..+..|+... ..|+|+|+|+.+++.+++ ..+|.+.++|+..++ ++.++||+|++-
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~------~~~v~~~~~~~e~~~--~~~~sfD~v~~~- 106 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALR------HPRVTYAVAPAEDTG--LPPASVDVAIAA- 106 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCC------CTTEEEEECCTTCCC--CCSSCEEEEEEC-
T ss_pred CCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhh------cCCceeehhhhhhhc--ccCCcccEEEEe-
Confidence 46799999999999999888753 589999999999876643 357999999998876 345899999972
Q ss_pred CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc
Q 011002 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (496)
Q Consensus 258 PCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~e 318 (496)
...- |. .. ...+..+.++| ||||+|++.+.+....
T Consensus 107 --~~~h---------~~-~~----------~~~~~e~~rvL----kpgG~l~~~~~~~~~~ 141 (257)
T 4hg2_A 107 --QAMH---------WF-DL----------DRFWAELRRVA----RPGAVFAAVTYGLTRV 141 (257)
T ss_dssp --SCCT---------TC-CH----------HHHHHHHHHHE----EEEEEEEEEEECCCBC
T ss_pred --eehh---------Hh-hH----------HHHHHHHHHHc----CCCCEEEEEECCCCCC
Confidence 1111 10 11 13567777876 9999999988876543
No 235
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.87 E-value=4.6e-09 Score=102.14 Aligned_cols=102 Identities=12% Similarity=0.135 Sum_probs=77.2
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEECC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDp 257 (496)
++.+|||+|||+|..+..++.. ...|+++|+|+.+++.++++.. .+ ++.+|+..++ +..+.||+|++..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~--~~~~~fD~v~~~~ 122 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLP--FPSGAFEAVLALG 122 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCC--SCTTCEEEEEECS
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCC--CCCCCEEEEEEcc
Confidence 7889999999999999988875 3589999999999999988754 22 6778888776 3347899999742
Q ss_pred CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 258 PCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
. +..+......+|..+.++| +|||+|+.++.+.
T Consensus 123 ~---------------------~~~~~~~~~~~l~~~~~~L----kpgG~l~~~~~~~ 155 (260)
T 2avn_A 123 D---------------------VLSYVENKDKAFSEIRRVL----VPDGLLIATVDNF 155 (260)
T ss_dssp S---------------------HHHHCSCHHHHHHHHHHHE----EEEEEEEEEEEBH
T ss_pred h---------------------hhhccccHHHHHHHHHHHc----CCCeEEEEEeCCh
Confidence 2 0111011345678888887 9999999988764
No 236
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.87 E-value=3.2e-08 Score=100.67 Aligned_cols=114 Identities=19% Similarity=0.199 Sum_probs=87.6
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCCCC
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~~~ 249 (496)
+..+...++.+|||+|||+|..+..++...++ ..++++|+ +.+++.+++++...|+. ++.++.+|+.+. ++ ..
T Consensus 176 ~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~-~~ 249 (360)
T 1tw3_A 176 AAAYDWTNVRHVLDVGGGKGGFAAAIARRAPH-VSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP---LP-RK 249 (360)
T ss_dssp HHHSCCTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC---CS-SC
T ss_pred HHhCCCccCcEEEEeCCcCcHHHHHHHHhCCC-CEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC---CC-CC
Confidence 34456678899999999999999999988753 68999999 99999999999999986 699999998652 11 34
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
||+|++.-. + ..+...+ ...+|..+.+.| +|||+|+.++..
T Consensus 250 ~D~v~~~~v------l-------~~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~ 290 (360)
T 1tw3_A 250 ADAIILSFV------L-------LNWPDHD-------AVRILTRCAEAL----EPGGRILIHERD 290 (360)
T ss_dssp EEEEEEESC------G-------GGSCHHH-------HHHHHHHHHHTE----EEEEEEEEEECC
T ss_pred ccEEEEccc------c-------cCCCHHH-------HHHHHHHHHHhc----CCCcEEEEEEEe
Confidence 999997322 1 1122221 245788888887 999999988766
No 237
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.86 E-value=1.1e-08 Score=101.11 Aligned_cols=138 Identities=15% Similarity=0.112 Sum_probs=85.8
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc-----------------CC-----------
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-----------------GV----------- 228 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~-----------------g~----------- 228 (496)
.++.+|||+|||+|..+ .++.... ...|+|+|+|+.+++.+++++... |.
T Consensus 70 ~~~~~vLDiGcG~G~~~-~l~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQ-LLSACSH-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp SCCSEEEEETCTTCCGG-GTTGGGG-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCCeEEEECCCcChHH-HHhhccC-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 37889999999999943 3333322 358999999999999998865431 10
Q ss_pred --ceEEEEecCCCC-Ccc---ccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 011002 229 --TNTIVCNYDGNE-LPK---VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANS 302 (496)
Q Consensus 229 --~nv~v~~~D~~~-l~~---~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~l 302 (496)
..+.++..|+.. ++. .++.+.||+|++.- ....+..-......+|..+.++|
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~------------------~l~~~~~~~~~~~~~l~~~~r~L---- 205 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAF------------------CLEAVSPDLASFQRALDHITTLL---- 205 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEES------------------CHHHHCSSHHHHHHHHHHHHTTE----
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEehh------------------hhhhhcCCHHHHHHHHHHHHHhc----
Confidence 015677788877 331 12235699999731 11110000122355678888876
Q ss_pred CCCcEEEEEeCCC------------CCcCCHHHHHHHHHhCCcEEeec
Q 011002 303 KSGGYIVYSTCSI------------MVTENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 303 kpGG~LVYSTCSl------------~~eENE~vV~~~L~~~~~~lv~~ 338 (496)
||||+|+++.+.- ..--..+.+..+|.+.+++++.+
T Consensus 206 kpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 253 (289)
T 2g72_A 206 RPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDL 253 (289)
T ss_dssp EEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEe
Confidence 9999999874211 01124556666777777776654
No 238
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.86 E-value=4.5e-09 Score=106.69 Aligned_cols=113 Identities=11% Similarity=0.037 Sum_probs=85.5
Q ss_pred CeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEECCCC
Q 011002 180 ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (496)
Q Consensus 180 ~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDpPC 259 (496)
.+|||+|||.|+.+..+++..++ ..|+++|+++.+++.+++++....-.++.++.+|+..+......+.||+|++|++.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~-~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQ-SRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTT-CEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCC-cEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 49999999999999999987654 58999999999999999988655456799999999876433334789999999753
Q ss_pred CCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 260 SGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 260 Sg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
. .+. |...+ ..+++..+.++| +|||+|+..+.+-
T Consensus 170 ~-~~~----~~~L~-------------t~efl~~~~r~L----kpgGvlv~~~~~~ 203 (317)
T 3gjy_A 170 G-AIT----PQNFT-------------TVEFFEHCHRGL----APGGLYVANCGDH 203 (317)
T ss_dssp T-SCC----CGGGS-------------BHHHHHHHHHHE----EEEEEEEEEEEEC
T ss_pred c-ccc----chhhh-------------HHHHHHHHHHhc----CCCcEEEEEecCC
Confidence 2 121 11100 134677777776 9999999887653
No 239
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.86 E-value=6.8e-09 Score=97.09 Aligned_cols=100 Identities=18% Similarity=0.152 Sum_probs=75.9
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEECC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDp 257 (496)
++.+|||+|||+|..+..+ +...|+++|+++.+++.+++++ .++.++.+|+..++ +..+.||+|++..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~--~~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALP--FPGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCC--SCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCC--CCCCcEEEEEEcC
Confidence 7899999999999988766 2238999999999999998876 56788899998876 3347899999843
Q ss_pred CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 258 PCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
. +..-+ ....+|..+.++| +|||+|++++...
T Consensus 104 ~------l~~~~----------------~~~~~l~~~~~~L----~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 104 T------LEFVE----------------DVERVLLEARRVL----RPGGALVVGVLEA 135 (211)
T ss_dssp C------TTTCS----------------CHHHHHHHHHHHE----EEEEEEEEEEECT
T ss_pred h------hhhcC----------------CHHHHHHHHHHHc----CCCCEEEEEecCC
Confidence 2 11111 1134677888877 9999999987543
No 240
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.85 E-value=9.1e-08 Score=98.34 Aligned_cols=117 Identities=12% Similarity=0.020 Sum_probs=89.4
Q ss_pred HhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccccCCCCC
Q 011002 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 172 ~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~~~~~F 250 (496)
..++..++.+|||+|||+|..+..++...++ ..++++|+ +..++.+++++...|+ .+|.+..+|+.. + .+ ..|
T Consensus 196 ~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~--~p-~~~ 269 (369)
T 3gwz_A 196 AAYDFSGAATAVDIGGGRGSLMAAVLDAFPG-LRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-T--IP-DGA 269 (369)
T ss_dssp HHSCCTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-C--CC-SSC
T ss_pred HhCCCccCcEEEEeCCCccHHHHHHHHHCCC-CeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-C--CC-CCc
Confidence 3445667899999999999999999998654 68999999 9999999999999997 459999999873 2 22 379
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc
Q 011002 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (496)
Q Consensus 251 D~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~e 318 (496)
|+|++-- + ...+.... ..++|.++.+.| +|||+|+..+..+...
T Consensus 270 D~v~~~~------v-------lh~~~d~~-------~~~~L~~~~~~L----~pgG~l~i~e~~~~~~ 313 (369)
T 3gwz_A 270 DVYLIKH------V-------LHDWDDDD-------VVRILRRIATAM----KPDSRLLVIDNLIDER 313 (369)
T ss_dssp SEEEEES------C-------GGGSCHHH-------HHHHHHHHHTTC----CTTCEEEEEEEBCCSS
T ss_pred eEEEhhh------h-------hccCCHHH-------HHHHHHHHHHHc----CCCCEEEEEEeccCCC
Confidence 9999721 1 11232222 245788888886 9999999988766543
No 241
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.84 E-value=3.4e-09 Score=104.64 Aligned_cols=91 Identities=15% Similarity=0.066 Sum_probs=72.6
Q ss_pred chhHHHhcCCCCC--CeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc-------C-C-ceEEEEe
Q 011002 167 SFLPVMALAPQEK--ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-------G-V-TNTIVCN 235 (496)
Q Consensus 167 S~l~v~~L~~~~g--~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~-------g-~-~nv~v~~ 235 (496)
...+..++.+.+| .+|||+|||.|..++.+|.. .+.|+++|+++..+..+++++++. | + .++.+++
T Consensus 75 ~e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~ 151 (258)
T 2oyr_A 75 GEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIH 151 (258)
T ss_dssp GSHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEE
T ss_pred HHHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEE
Confidence 3455667777778 99999999999999999987 257999999999988888887654 2 4 5699999
Q ss_pred cCCCCCccccCCCCCCEEEECCCCCC
Q 011002 236 YDGNELPKVLGLNTVDRVLLDAPCSG 261 (496)
Q Consensus 236 ~D~~~l~~~~~~~~FD~VLlDpPCSg 261 (496)
+|+..+...+. ..||+|++|||+..
T Consensus 152 ~D~~~~L~~~~-~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 152 ASSLTALTDIT-PRPQVVYLDPMFPH 176 (258)
T ss_dssp SCHHHHSTTCS-SCCSEEEECCCCCC
T ss_pred CCHHHHHHhCc-ccCCEEEEcCCCCC
Confidence 99877533232 46999999999743
No 242
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.84 E-value=1.8e-09 Score=107.14 Aligned_cols=113 Identities=10% Similarity=0.083 Sum_probs=75.1
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcC---CCcEE--EEEeCCHHHHHHHHHHHHHc-CCceEEEE--ecCCCCCcc----
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMK---NTGLI--YANEMKASRLKSLTANLHRM-GVTNTIVC--NYDGNELPK---- 243 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~---~~g~V--~AvDis~~rl~~l~~nl~r~-g~~nv~v~--~~D~~~l~~---- 243 (496)
+.++.+|||+|||+|..+..++..+. +...| +++|+|+.+++.+++++... ++.++.+. ..|+..++.
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 45788999999999998875543321 23444 99999999999999998764 66666554 444433321
Q ss_pred ccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 244 VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 244 ~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
.+..+.||+|++-- ++ .+-.. ....|..+.++| ||||+|+.++.+
T Consensus 130 ~~~~~~fD~V~~~~------~l------~~~~d----------~~~~l~~~~r~L----kpgG~l~i~~~~ 174 (292)
T 2aot_A 130 KKELQKWDFIHMIQ------ML------YYVKD----------IPATLKFFHSLL----GTNAKMLIIVVS 174 (292)
T ss_dssp TTCCCCEEEEEEES------CG------GGCSC----------HHHHHHHHHHTE----EEEEEEEEEEEC
T ss_pred ccCCCceeEEEEee------ee------eecCC----------HHHHHHHHHHHc----CCCcEEEEEEec
Confidence 12347899999721 11 01111 133577777876 999999998654
No 243
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.84 E-value=4.1e-09 Score=109.43 Aligned_cols=117 Identities=16% Similarity=0.216 Sum_probs=83.7
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCEEEE
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
.+|.+|||+|||+|..++.+|+. +...|+|+|.|+ ++..++++++.+|+.+ |.++++|+.++.. +++||+|++
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a--GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l---pe~~Dvivs 155 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA--GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL---PEQVDAIVS 155 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC---SSCEEEEEC
T ss_pred cCCCEEEEeCCCccHHHHHHHHh--CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC---CccccEEEe
Confidence 36899999999999998877764 235899999996 7899999999999976 9999999988753 268999998
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC--CcCCHH
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM--VTENEA 322 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~--~eENE~ 322 (496)
+.- |.+++. +..+ ..++...-++ |+|||.++-+.|+++ +.|.+.
T Consensus 156 E~~--~~~l~~----------e~~l-------~~~l~a~~r~----Lkp~G~~iP~~atly~apie~~~ 201 (376)
T 4hc4_A 156 EWM--GYGLLH----------ESML-------SSVLHARTKW----LKEGGLLLPASAELFIVPISDQM 201 (376)
T ss_dssp CCC--BTTBTT----------TCSH-------HHHHHHHHHH----EEEEEEEESCEEEEEEEEECCHH
T ss_pred ecc--cccccc----------cchh-------hhHHHHHHhh----CCCCceECCccceEEEEEeccch
Confidence 643 222211 0111 1233333344 499999997777754 345543
No 244
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.84 E-value=4.5e-08 Score=99.34 Aligned_cols=117 Identities=15% Similarity=0.110 Sum_probs=89.6
Q ss_pred cCCCC-CCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCC
Q 011002 174 LAPQE-KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 174 L~~~~-g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD 251 (496)
++..+ +.+|||+|||+|..+..++...++ ..++++|+ +..++.+++++...++.+ +.++.+|....+... ...||
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~~D 250 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRHPQ-LTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE-GGAAD 250 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHCTT-CEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT-TCCEE
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhCCC-CeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC-CCCcc
Confidence 34455 889999999999999999998764 78999999 889999999999999864 999999998764212 25799
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~ 317 (496)
+|++-- + ...++..+ ...+|.++.+.| +|||+|+.....+..
T Consensus 251 ~v~~~~------v-------lh~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 251 VVMLND------C-------LHYFDARE-------AREVIGHAAGLV----KPGGALLILTMTMND 292 (352)
T ss_dssp EEEEES------C-------GGGSCHHH-------HHHHHHHHHHTE----EEEEEEEEEEECCCT
T ss_pred EEEEec------c-------cccCCHHH-------HHHHHHHHHHHc----CCCCEEEEEEeccCC
Confidence 999821 1 11233222 245788888887 999999988766544
No 245
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.82 E-value=3.5e-09 Score=107.00 Aligned_cols=118 Identities=12% Similarity=0.112 Sum_probs=84.9
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--C---CceEEEEecCCCCCccccCCCCCC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--G---VTNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~--g---~~nv~v~~~D~~~l~~~~~~~~FD 251 (496)
..+.+|||+|||+|+.+..++...+ ...|+++|+++.+++.+++++..+ | -.++.++.+|+..+... ..+.||
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-~~~~fD 153 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER-TEERYD 153 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH-CCCCEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHh-cCCCcc
Confidence 3468999999999999999887543 468999999999999999998762 2 35799999999774221 236899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
+|++|++... +. ..|.... ...+++..+.++| +|||+|+..+.+.
T Consensus 154 ~Ii~d~~~~~-~~--~~~~~~l------------~~~~~l~~~~~~L----kpgG~lv~~~~~~ 198 (314)
T 1uir_A 154 VVIIDLTDPV-GE--DNPARLL------------YTVEFYRLVKAHL----NPGGVMGMQTGMI 198 (314)
T ss_dssp EEEEECCCCB-ST--TCGGGGG------------SSHHHHHHHHHTE----EEEEEEEEEEEEE
T ss_pred EEEECCCCcc-cc--cCcchhc------------cHHHHHHHHHHhc----CCCcEEEEEccCc
Confidence 9999987421 00 0110000 0245677777776 9999999876553
No 246
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.82 E-value=5.8e-09 Score=97.90 Aligned_cols=102 Identities=16% Similarity=0.097 Sum_probs=74.6
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.++.+|||+|||+|..+..++.. + ..|+++|+++.+++.+++++ ..+...|+..+...+..+.||+|++.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~--~-~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~~~~~~~~fD~v~~~ 100 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN--G-TRVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMDMPYEEEQFDCVIFG 100 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT--T-CEEEEEESSHHHHHHHHTTS-------SEEEESCTTTCCCCSCTTCEEEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc--C-CeEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcCCCCCCCccCEEEEC
Confidence 67899999999999999998876 2 78999999999998887654 25677888764333444789999984
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
.. +..-+ . ...+|..+.++| +|||+|+.++..
T Consensus 101 ~~------l~~~~------~----------~~~~l~~~~~~L----~~gG~l~~~~~~ 132 (230)
T 3cc8_A 101 DV------LEHLF------D----------PWAVIEKVKPYI----KQNGVILASIPN 132 (230)
T ss_dssp SC------GGGSS------C----------HHHHHHHTGGGE----EEEEEEEEEEEC
T ss_pred Ch------hhhcC------C----------HHHHHHHHHHHc----CCCCEEEEEeCC
Confidence 21 11111 1 124577777776 999999998744
No 247
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.81 E-value=1.2e-08 Score=96.49 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=84.3
Q ss_pred CCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEECCC
Q 011002 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAP 258 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDpP 258 (496)
+.+|||+|||+|..+..++.. +++|+++.+++.++++ ++.++.+|+..++ +..+.||+|++...
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~--~~~~~fD~v~~~~~ 111 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-------GVFVLKGTAENLP--LKDESFDFALMVTT 111 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-------TCEEEECBTTBCC--SCTTCEEEEEEESC
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-------CCEEEEcccccCC--CCCCCeeEEEEcch
Confidence 889999999999998766532 9999999999998877 5678888988765 33468999998421
Q ss_pred CCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc--------------------
Q 011002 259 CSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT-------------------- 318 (496)
Q Consensus 259 CSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~e-------------------- 318 (496)
+..-+ . ...+|..+.++| +|||+|+.++......
T Consensus 112 ------l~~~~------~----------~~~~l~~~~~~L----~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (219)
T 1vlm_A 112 ------ICFVD------D----------PERALKEAYRIL----KKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARF 165 (219)
T ss_dssp ------GGGSS------C----------HHHHHHHHHHHE----EEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCC
T ss_pred ------Hhhcc------C----------HHHHHHHHHHHc----CCCcEEEEEEeCCccHHHHHHHHHhcCcchhccccc
Confidence 11100 1 134677777876 9999999987543111
Q ss_pred CCHHHHHHHHHhCCcEEeec
Q 011002 319 ENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 319 ENE~vV~~~L~~~~~~lv~~ 338 (496)
-..+.+..+|++.+++++.+
T Consensus 166 ~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 166 FSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp CCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHCCCeEEEE
Confidence 14556666777777777665
No 248
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.80 E-value=5.5e-09 Score=101.68 Aligned_cols=98 Identities=15% Similarity=0.215 Sum_probs=76.9
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.++.+|||+|||+|..+..++..++ .+.|+++|+++.+++.++++. .++.+..+|+..++. ..+.||+|++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~--~~~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPF--SDTSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSB--CTTCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCC--CCCceeEEEEe
Confidence 5789999999999999999998764 368999999999999988764 457788899887763 34789999973
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
.. + ..+..+.++| +|||+|+.++...
T Consensus 156 ~~----------~-------------------~~l~~~~~~L----~pgG~l~~~~~~~ 181 (269)
T 1p91_A 156 YA----------P-------------------CKAEELARVV----KPGGWVITATPGP 181 (269)
T ss_dssp SC----------C-------------------CCHHHHHHHE----EEEEEEEEEEECT
T ss_pred CC----------h-------------------hhHHHHHHhc----CCCcEEEEEEcCH
Confidence 21 0 0256666776 9999999987543
No 249
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.80 E-value=2e-08 Score=108.76 Aligned_cols=169 Identities=17% Similarity=0.174 Sum_probs=109.8
Q ss_pred cceEEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCC------------CcEEEEEeCCHHHHHHHHHHHH
Q 011002 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKN------------TGLIYANEMKASRLKSLTANLH 224 (496)
Q Consensus 157 ~G~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~------------~g~V~AvDis~~rl~~l~~nl~ 224 (496)
.|.|+-=..-+.+.+.++.|++|++|+|-|||+|++.+.+...+.. ...++|+|+++.....++-|+-
T Consensus 196 ~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~ 275 (530)
T 3ufb_A 196 SGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL 275 (530)
T ss_dssp CCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH
T ss_pred CceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH
Confidence 4544432334556788899999999999999999998877765532 2369999999999999999999
Q ss_pred HcCCceEEEEecCCCCCccc--cCCCCCCEEEECCCCCCCCc---ccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhh
Q 011002 225 RMGVTNTIVCNYDGNELPKV--LGLNTVDRVLLDAPCSGTGV---ISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVD 299 (496)
Q Consensus 225 r~g~~nv~v~~~D~~~l~~~--~~~~~FD~VLlDpPCSg~Gv---i~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~ 299 (496)
-.|+....+..+|....+.. .....||+||.|||+++... ..+.+.. ...+ ..+..++.+++..|.
T Consensus 276 lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~-~~~~--------~~~~~Fl~~~l~~Lk 346 (530)
T 3ufb_A 276 LHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPED-MQTA--------ETAMLFLQLIMRKLK 346 (530)
T ss_dssp HHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGG-GCCC--------BHHHHHHHHHHHHBC
T ss_pred hcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchh-cccc--------hhHHHHHHHHHHHhh
Confidence 88987666778887665422 12257999999999976421 1111111 0111 123345667777762
Q ss_pred ---hcCCCCcEEEEEeCC--CCCcCCHH-HHHHHHHhCCcE
Q 011002 300 ---ANSKSGGYIVYSTCS--IMVTENEA-VIDYALKKRDVK 334 (496)
Q Consensus 300 ---~~lkpGG~LVYSTCS--l~~eENE~-vV~~~L~~~~~~ 334 (496)
..+++||++++.+-. ++..-.+. +-++++++..+.
T Consensus 347 ~~~~~l~~gGr~avVlP~g~Lf~~~~~~~iRk~Lle~~~l~ 387 (530)
T 3ufb_A 347 RPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKNFNLH 387 (530)
T ss_dssp CTTSSSSSCCEEEEEEEHHHHHCCTHHHHHHHHHHHHSEEE
T ss_pred hhhhccCCCceEEEEecchhhhccchHHHHHHHHhhcCEEE
Confidence 112479998877642 33322343 445666766543
No 250
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.79 E-value=7.3e-08 Score=97.02 Aligned_cols=112 Identities=14% Similarity=0.060 Sum_probs=86.0
Q ss_pred cCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccccCCCCCCE
Q 011002 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~~~~~~FD~ 252 (496)
++..+ .+|||+|||+|..+..++...++ ..++++|+ +.+++.+++++...|+ .++.++.+|... + .+ ..||+
T Consensus 164 ~~~~~-~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~--~~-~~~D~ 236 (334)
T 2ip2_A 164 LDFRG-RSFVDVGGGSGELTKAILQAEPS-ARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-E--VP-SNGDI 236 (334)
T ss_dssp SCCTT-CEEEEETCTTCHHHHHHHHHCTT-CEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-C--CC-SSCSE
T ss_pred CCCCC-CEEEEeCCCchHHHHHHHHHCCC-CEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-C--CC-CCCCE
Confidence 34455 89999999999999999998754 68999999 9999999999988876 459999999876 2 22 57999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
|++.-. ...+.... ...+|..+.+.| +|||+|+.....+.
T Consensus 237 v~~~~v-------------l~~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 237 YLLSRI-------------IGDLDEAA-------SLRLLGNCREAM----AGDGRVVVIERTIS 276 (334)
T ss_dssp EEEESC-------------GGGCCHHH-------HHHHHHHHHHHS----CTTCEEEEEECCBC
T ss_pred EEEchh-------------ccCCCHHH-------HHHHHHHHHHhc----CCCCEEEEEEeccC
Confidence 997221 11233222 245788888886 99999999876654
No 251
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.77 E-value=1.5e-08 Score=113.28 Aligned_cols=148 Identities=17% Similarity=0.178 Sum_probs=92.9
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCC--CcEEEEEeCCHHHHHHH--HHHHHH----cCCceEEEEecCCCCCccccCCC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKN--TGLIYANEMKASRLKSL--TANLHR----MGVTNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~--~g~V~AvDis~~rl~~l--~~nl~r----~g~~nv~v~~~D~~~l~~~~~~~ 248 (496)
.++.+|||.|||+|+..+.++..++. ...|+|+|+++..++.+ +.|+.. .|+.+..+...|...... ....
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~-~~~~ 398 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNP-EDFA 398 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCG-GGGT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccc-cccC
Confidence 36889999999999999999887742 35799999999999998 666654 344444555666554321 1236
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHH-----------HHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC-CC
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQK-----------CSYLQKQLILAAIDMVDANSKSGGYIVYSTCS-IM 316 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~-----------l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS-l~ 316 (496)
.||+|++|||+.+.... +...... ...+.. ...+...++.+++++| ++||++++.+-+ +.
T Consensus 399 kFDVVIgNPPYg~~~~~---~~e~kd~-~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lL----KpGGrLAfIlP~s~L 470 (878)
T 3s1s_A 399 NVSVVVMNPPYVSGVTD---PAIKRKF-AHKIIQLTGNRPQTLFGQIGVEALFLELVTELV----QDGTVISAIMPKQYL 470 (878)
T ss_dssp TEEEEEECCBCCSSCCC---HHHHHHH-HHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHS----CTTCEEEEEEETHHH
T ss_pred CCCEEEECCCccccccc---hhhhhhH-HHHhhhhccccccccccccchHHHHHHHHHHhc----CCCcEEEEEEChHHh
Confidence 89999999999753321 1100000 000000 0123556788999987 999999887654 33
Q ss_pred CcC---CHHHHHHHHHhCCc
Q 011002 317 VTE---NEAVIDYALKKRDV 333 (496)
Q Consensus 317 ~eE---NE~vV~~~L~~~~~ 333 (496)
... ...+-++++++..+
T Consensus 471 f~sg~~~kkLRk~LLe~~~I 490 (878)
T 3s1s_A 471 TAQGNESKAFREFLVGNFGL 490 (878)
T ss_dssp HCCSHHHHHHHHHHTTTTCE
T ss_pred ccCChHHHHHHHHHHhCCCe
Confidence 222 23344455555443
No 252
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.75 E-value=3.1e-08 Score=93.00 Aligned_cols=112 Identities=17% Similarity=0.178 Sum_probs=80.6
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEE
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
...++.+|||+|||+|..+..++ ..|+++|+++. ++.++.+|+..++ +..+.||+|+
T Consensus 64 ~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~---------------~~~~~~~d~~~~~--~~~~~fD~v~ 120 (215)
T 2zfu_A 64 QRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL---------------DPRVTVCDMAQVP--LEDESVDVAV 120 (215)
T ss_dssp TSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS---------------STTEEESCTTSCS--CCTTCEEEEE
T ss_pred ccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC---------------CceEEEeccccCC--CCCCCEeEEE
Confidence 34578899999999999887662 57999999987 4567788988765 3347899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcE
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVK 334 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~~ 334 (496)
+... +. .++ ...+|..+.++| +|||+|+++++... ......+..+++..+++
T Consensus 121 ~~~~------l~-~~~----------------~~~~l~~~~~~L----~~gG~l~i~~~~~~-~~~~~~~~~~l~~~Gf~ 172 (215)
T 2zfu_A 121 FCLS------LM-GTN----------------IRDFLEEANRVL----KPGGLLKVAEVSSR-FEDVRTFLRAVTKLGFK 172 (215)
T ss_dssp EESC------CC-SSC----------------HHHHHHHHHHHE----EEEEEEEEEECGGG-CSCHHHHHHHHHHTTEE
T ss_pred Eehh------cc-ccC----------------HHHHHHHHHHhC----CCCeEEEEEEcCCC-CCCHHHHHHHHHHCCCE
Confidence 8432 10 111 134577777876 99999999887642 23667777778877777
Q ss_pred Eee
Q 011002 335 LVP 337 (496)
Q Consensus 335 lv~ 337 (496)
++.
T Consensus 173 ~~~ 175 (215)
T 2zfu_A 173 IVS 175 (215)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 253
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.75 E-value=8.6e-09 Score=101.46 Aligned_cols=87 Identities=15% Similarity=0.185 Sum_probs=71.4
Q ss_pred chhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc--
Q 011002 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-- 244 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~-- 244 (496)
....+..+++.++++|||+|||+|..|..|+... +.|+|+|+|+.+++.+++++.. ..++.++++|+..++..
T Consensus 18 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~~~~ 92 (255)
T 3tqs_A 18 LQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDFSSV 92 (255)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCGGGS
T ss_pred HHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCHHHh
Confidence 3445677788999999999999999999988752 6899999999999999999875 46799999999887531
Q ss_pred cCCCCCCEEEECCCC
Q 011002 245 LGLNTVDRVLLDAPC 259 (496)
Q Consensus 245 ~~~~~FD~VLlDpPC 259 (496)
.....|| |+.|+|+
T Consensus 93 ~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 93 KTDKPLR-VVGNLPY 106 (255)
T ss_dssp CCSSCEE-EEEECCH
T ss_pred ccCCCeE-EEecCCc
Confidence 1124688 8999995
No 254
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.72 E-value=3.2e-08 Score=97.97 Aligned_cols=111 Identities=13% Similarity=0.144 Sum_probs=79.3
Q ss_pred CCCeEeecccCC---cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc---------cc
Q 011002 178 EKERVIDMAAAP---GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK---------VL 245 (496)
Q Consensus 178 ~g~~VLDlcAGp---Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~---------~~ 245 (496)
+..+|||+|||+ |..+..++... +.+.|+++|+|+.+++.+++++.. ..++.++.+|+..... .+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCCchhhhccchhhccC
Confidence 457999999999 98766555554 347999999999999999998843 3569999999976421 12
Q ss_pred CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
....||.|++.. ++.. +... ....+|..+.+.| +|||+|+.++...
T Consensus 154 d~~~~d~v~~~~------vlh~-------~~d~-------~~~~~l~~~~~~L----~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 154 DFSRPAAIMLVG------MLHY-------LSPD-------VVDRVVGAYRDAL----APGSYLFMTSLVD 199 (274)
T ss_dssp CTTSCCEEEETT------TGGG-------SCTT-------THHHHHHHHHHHS----CTTCEEEEEEEBC
T ss_pred CCCCCEEEEEec------hhhh-------CCcH-------HHHHHHHHHHHhC----CCCcEEEEEEecC
Confidence 235799998732 2111 1100 1245688888886 9999999998764
No 255
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.70 E-value=1.5e-08 Score=99.94 Aligned_cols=100 Identities=11% Similarity=-0.032 Sum_probs=78.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc----CCceEEEEecCCCCCccccCCCCCCEE
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM----GVTNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~----g~~nv~v~~~D~~~l~~~~~~~~FD~V 253 (496)
.+.+|||+|||.|+.+..++.. + +.|+++|+++.+++.+++++..+ .-.++.++.+|+..+. +.||+|
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-----~~fD~I 143 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-----KKYDLI 143 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-----CCEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-----hhCCEE
Confidence 4579999999999999888876 3 79999999999999998876442 2246899999998764 579999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
++|++ +|.. ++..+.+.| +|||.|+..+++..
T Consensus 144 i~d~~---------dp~~------------------~~~~~~~~L----~pgG~lv~~~~~~~ 175 (262)
T 2cmg_A 144 FCLQE---------PDIH------------------RIDGLKRML----KEDGVFISVAKHPL 175 (262)
T ss_dssp EESSC---------CCHH------------------HHHHHHTTE----EEEEEEEEEEECTT
T ss_pred EECCC---------ChHH------------------HHHHHHHhc----CCCcEEEEEcCCcc
Confidence 99953 1210 456666666 99999999876643
No 256
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.66 E-value=2.6e-08 Score=96.95 Aligned_cols=94 Identities=13% Similarity=0.113 Sum_probs=72.8
Q ss_pred EEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC
Q 011002 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (496)
Q Consensus 160 ~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~ 239 (496)
|.++.......+..+++.++.+|||+|||+|..|..++... +.|+|+|+|+.+++.+++++.. ..++.++++|+.
T Consensus 12 fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~ 86 (244)
T 1qam_A 12 FITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDIL 86 (244)
T ss_dssp BCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGG
T ss_pred ccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHH
Confidence 33443333445566677889999999999999999999874 6899999999999999998864 357999999998
Q ss_pred CCccccCCCCCCEEEECCCCC
Q 011002 240 ELPKVLGLNTVDRVLLDAPCS 260 (496)
Q Consensus 240 ~l~~~~~~~~FD~VLlDpPCS 260 (496)
.++... ...| .|++|+|+.
T Consensus 87 ~~~~~~-~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 87 QFKFPK-NQSY-KIFGNIPYN 105 (244)
T ss_dssp GCCCCS-SCCC-EEEEECCGG
T ss_pred hCCccc-CCCe-EEEEeCCcc
Confidence 775321 1345 789999964
No 257
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.64 E-value=7.2e-09 Score=101.48 Aligned_cols=77 Identities=19% Similarity=0.213 Sum_probs=52.1
Q ss_pred CCCCCeEeecccCCcHHHHHHHHH--cCC-CcEEEEEe--CCHHHHHHHHHHHHHcCCceEEEEec-CCCCCccccCCCC
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAAL--MKN-TGLIYANE--MKASRLKSLTANLHRMGVTNTIVCNY-DGNELPKVLGLNT 249 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l--~~~-~g~V~AvD--is~~rl~~l~~nl~r~g~~nv~v~~~-D~~~l~~~~~~~~ 249 (496)
++||.+||||||||||++.+++.+ ++. .|.|+|+| +.+-.. ...|+.-+.+..+ |.+.+. ...
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-------~~~Gv~~i~~~~G~Df~~~~----~~~ 139 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-------QSYGWNIVTMKSGVDVFYKP----SEI 139 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-------CSTTGGGEEEECSCCGGGSC----CCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc-------cCCCceEEEeeccCCccCCC----CCC
Confidence 578999999999999999999987 432 46777877 332100 0023333566657 887643 257
Q ss_pred CCEEEECCCCCCCCc
Q 011002 250 VDRVLLDAPCSGTGV 264 (496)
Q Consensus 250 FD~VLlDpPCSg~Gv 264 (496)
||+||+|.--+ +|.
T Consensus 140 ~DvVLSDMAPn-SG~ 153 (269)
T 2px2_A 140 SDTLLCDIGES-SPS 153 (269)
T ss_dssp CSEEEECCCCC-CSC
T ss_pred CCEEEeCCCCC-CCc
Confidence 99999995435 664
No 258
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.64 E-value=3.7e-08 Score=98.21 Aligned_cols=96 Identities=15% Similarity=0.139 Sum_probs=72.8
Q ss_pred EEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC
Q 011002 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG 238 (496)
Q Consensus 160 ~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~ 238 (496)
|..+..-....+..+++.++++|||+|||+|..|..|+..... .+.|+|+|+|+.+++.++++. ..++.++++|+
T Consensus 24 fL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~ 99 (279)
T 3uzu_A 24 FLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDA 99 (279)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCG
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECCh
Confidence 4443333344566778889999999999999999999988643 356999999999999999983 45799999999
Q ss_pred CCCccc--cCCC--CCCEEEECCCC
Q 011002 239 NELPKV--LGLN--TVDRVLLDAPC 259 (496)
Q Consensus 239 ~~l~~~--~~~~--~FD~VLlDpPC 259 (496)
..++.. .... ..+.|+.|+|+
T Consensus 100 ~~~~~~~~~~~~~~~~~~vv~NlPY 124 (279)
T 3uzu_A 100 LTFDFGSIARPGDEPSLRIIGNLPY 124 (279)
T ss_dssp GGCCGGGGSCSSSSCCEEEEEECCH
T ss_pred hcCChhHhcccccCCceEEEEccCc
Confidence 876521 1101 34589999995
No 259
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.63 E-value=9.2e-08 Score=95.97 Aligned_cols=98 Identities=17% Similarity=0.153 Sum_probs=66.7
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEE-EecCCCCCcc-ccCCCCCCEEEE
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIV-CNYDGNELPK-VLGLNTVDRVLL 255 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v-~~~D~~~l~~-~~~~~~FD~VLl 255 (496)
+|.+|||+|||+|+.|..+++. +.+.|+|+|+++.+++...++- ..+.. ...|++.+.. .++...||.|++
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~a~r~~-----~rv~~~~~~ni~~l~~~~l~~~~fD~v~~ 157 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVWKLRQD-----DRVRSMEQYNFRYAEPVDFTEGLPSFASI 157 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCHHHHTC-----TTEEEECSCCGGGCCGGGCTTCCCSEEEE
T ss_pred cccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHHHHHhC-----cccceecccCceecchhhCCCCCCCEEEE
Confidence 5789999999999999988886 3469999999999998743321 12222 2234333321 122245999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
|.-.... ..+|..+.++| +|||+||..
T Consensus 158 d~sf~sl-------------------------~~vL~e~~rvL----kpGG~lv~l 184 (291)
T 3hp7_A 158 DVSFISL-------------------------NLILPALAKIL----VDGGQVVAL 184 (291)
T ss_dssp CCSSSCG-------------------------GGTHHHHHHHS----CTTCEEEEE
T ss_pred EeeHhhH-------------------------HHHHHHHHHHc----CcCCEEEEE
Confidence 8753211 23577777776 999999987
No 260
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.62 E-value=2.9e-08 Score=98.56 Aligned_cols=95 Identities=15% Similarity=0.042 Sum_probs=74.8
Q ss_pred EEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC
Q 011002 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (496)
Q Consensus 160 ~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~ 239 (496)
|.++..-....+..+++.++ +|||+|||+|..|..|+... +.|+|+|+|+.+++.+++++.. .++.++++|+.
T Consensus 29 fL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~---~~v~vi~~D~l 101 (271)
T 3fut_A 29 FLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSG---LPVRLVFQDAL 101 (271)
T ss_dssp EECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTT---SSEEEEESCGG
T ss_pred ccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCC---CCEEEEECChh
Confidence 44433333445677788889 99999999999999999863 6899999999999999998762 57999999998
Q ss_pred CCccccCCCCCCEEEECCCCCCC
Q 011002 240 ELPKVLGLNTVDRVLLDAPCSGT 262 (496)
Q Consensus 240 ~l~~~~~~~~FD~VLlDpPCSg~ 262 (496)
.++... ...||.|+.|+|+.-+
T Consensus 102 ~~~~~~-~~~~~~iv~NlPy~is 123 (271)
T 3fut_A 102 LYPWEE-VPQGSLLVANLPYHIA 123 (271)
T ss_dssp GSCGGG-SCTTEEEEEEECSSCC
T ss_pred hCChhh-ccCccEEEecCccccc
Confidence 775321 1369999999997643
No 261
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.62 E-value=2.5e-07 Score=88.11 Aligned_cols=116 Identities=19% Similarity=0.166 Sum_probs=82.3
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC---ceEEEEecCCCCC------------
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV---TNTIVCNYDGNEL------------ 241 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~---~nv~v~~~D~~~l------------ 241 (496)
.+..+||++|| |+-|+.+|.+ . .|+|+++|.++.+.+.+++++++.|+ .+|.++.+|+...
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred hCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhh
Confidence 35689999998 5777777774 3 58999999999999999999999995 5699999997542
Q ss_pred ---ccc------c-CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 242 ---PKV------L-GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 242 ---~~~------~-~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
+.. . ..+.||+||+|+.- . + ..+..++.+| +|||+||.-
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k----------------~----------~-~~~~~~l~~l----~~GG~Iv~D 153 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRF----------------R----------V-GCALATAFSI----TRPVTLLFD 153 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSS----------------H----------H-HHHHHHHHHC----SSCEEEEET
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCC----------------c----------h-hHHHHHHHhc----CCCeEEEEe
Confidence 210 1 12679999999851 0 0 1244466665 999999775
Q ss_pred eCCCCCcCCHHHHHHHHH
Q 011002 312 TCSIMVTENEAVIDYALK 329 (496)
Q Consensus 312 TCSl~~eENE~vV~~~L~ 329 (496)
..+.. .....|..++.
T Consensus 154 Nv~~r--~~y~~v~~~~~ 169 (202)
T 3cvo_A 154 DYSQR--RWQHQVEEFLG 169 (202)
T ss_dssp TGGGC--SSGGGGHHHHC
T ss_pred CCcCC--cchHHHHHHHh
Confidence 54332 33444555554
No 262
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.62 E-value=3.3e-08 Score=98.42 Aligned_cols=114 Identities=13% Similarity=0.100 Sum_probs=79.0
Q ss_pred CCeEeecccCC--cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccC----CCCCC-
Q 011002 179 KERVIDMAAAP--GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLG----LNTVD- 251 (496)
Q Consensus 179 g~~VLDlcAGp--Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~----~~~FD- 251 (496)
..+|||+|||+ |+.+..+++...+...|+++|.|+.+++.+++++...+..++.++.+|++.+...+. ...||
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCc
Confidence 36899999997 566777777665668999999999999999998876555579999999988632111 13455
Q ss_pred ----EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 252 ----RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 252 ----~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
.|++++ ++ .|-.... ....+|....+.| +|||+|+.++.+-
T Consensus 159 ~~p~av~~~a------vL------H~l~d~~-------~p~~~l~~l~~~L----~PGG~Lvls~~~~ 203 (277)
T 3giw_A 159 TRPVALTVIA------IV------HFVLDED-------DAVGIVRRLLEPL----PSGSYLAMSIGTA 203 (277)
T ss_dssp TSCCEEEEES------CG------GGSCGGG-------CHHHHHHHHHTTS----CTTCEEEEEEECC
T ss_pred CCcchHHhhh------hH------hcCCchh-------hHHHHHHHHHHhC----CCCcEEEEEeccC
Confidence 455532 11 1110000 0235677777776 9999999998664
No 263
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.60 E-value=3.8e-08 Score=102.72 Aligned_cols=101 Identities=17% Similarity=0.182 Sum_probs=73.9
Q ss_pred CCCeEeecccC------CcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc--c--CC
Q 011002 178 EKERVIDMAAA------PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV--L--GL 247 (496)
Q Consensus 178 ~g~~VLDlcAG------pGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~--~--~~ 247 (496)
++.+|||+||| +|+.++.++....+.+.|+++|+++.+. ....++.++++|+.+++.. + ..
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhccc
Confidence 56899999999 7888888887654458999999999862 2346799999999886532 0 02
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
+.||+|++|.- - . ...+...|..+.++| ||||+++++...
T Consensus 287 ~sFDlVisdgs----H------------~-------~~d~~~aL~el~rvL----KPGGvlVi~Dl~ 326 (419)
T 3sso_A 287 GPFDIVIDDGS----H------------I-------NAHVRTSFAALFPHV----RPGGLYVIEDMW 326 (419)
T ss_dssp CCEEEEEECSC----C------------C-------HHHHHHHHHHHGGGE----EEEEEEEEECGG
T ss_pred CCccEEEECCc----c------------c-------chhHHHHHHHHHHhc----CCCeEEEEEecc
Confidence 78999998631 0 0 012345677777776 999999998655
No 264
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.60 E-value=5.6e-08 Score=96.69 Aligned_cols=109 Identities=16% Similarity=0.187 Sum_probs=76.1
Q ss_pred CCCeEeecccCCcH----HHHHHHHHcCC---CcEEEEEeCCHHHHHHHHHHHH--------------H---------cC
Q 011002 178 EKERVIDMAAAPGG----KTTYIAALMKN---TGLIYANEMKASRLKSLTANLH--------------R---------MG 227 (496)
Q Consensus 178 ~g~~VLDlcAGpGg----ktl~lA~l~~~---~g~V~AvDis~~rl~~l~~nl~--------------r---------~g 227 (496)
++.+|||+|||+|. .++.++..++. ...|+|+|+|+.+|+.+++++- + .|
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35699999999998 66667776542 2489999999999999998751 1 01
Q ss_pred ---C-----ceEEEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhh
Q 011002 228 ---V-----TNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVD 299 (496)
Q Consensus 228 ---~-----~nv~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~ 299 (496)
+ .+|.+..+|....+... .+.||+|+|- .++ .... ...|.+++....+.|
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~-~~~fDlI~cr------nvl-------iyf~-------~~~~~~vl~~~~~~L- 242 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNV-PGPFDAIFCR------NVM-------IYFD-------KTTQEDILRRFVPLL- 242 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCC-CCCEEEEEEC------SSG-------GGSC-------HHHHHHHHHHHGGGE-
T ss_pred ceeechhhcccCeEEecccCCCCCCc-CCCeeEEEEC------Cch-------HhCC-------HHHHHHHHHHHHHHh-
Confidence 1 25889999988743211 3689999981 111 1111 123677888888887
Q ss_pred hcCCCCcEEEEE
Q 011002 300 ANSKSGGYIVYS 311 (496)
Q Consensus 300 ~~lkpGG~LVYS 311 (496)
+|||+|+..
T Consensus 243 ---~pgG~L~lg 251 (274)
T 1af7_A 243 ---KPDGLLFAG 251 (274)
T ss_dssp ---EEEEEEEEC
T ss_pred ---CCCcEEEEE
Confidence 999999873
No 265
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.59 E-value=4.4e-08 Score=95.96 Aligned_cols=94 Identities=16% Similarity=0.157 Sum_probs=71.7
Q ss_pred EEEecCcchhHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC
Q 011002 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (496)
Q Consensus 160 ~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~ 239 (496)
|..+..-....+..+.+.++++|||+|||+|..|..++.. +.+.|+|+|+|+.+++.++++ +..++.++++|+.
T Consensus 13 fl~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~ 86 (249)
T 3ftd_A 13 LLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI----GDERLEVINEDAS 86 (249)
T ss_dssp CEECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchh
Confidence 4444333344566778889999999999999999988875 236899999999999999887 3457999999998
Q ss_pred CCccccCCCCCCEEEECCCCC
Q 011002 240 ELPKVLGLNTVDRVLLDAPCS 260 (496)
Q Consensus 240 ~l~~~~~~~~FD~VLlDpPCS 260 (496)
.++...... ...|+.|+|+.
T Consensus 87 ~~~~~~~~~-~~~vv~NlPy~ 106 (249)
T 3ftd_A 87 KFPFCSLGK-ELKVVGNLPYN 106 (249)
T ss_dssp TCCGGGSCS-SEEEEEECCTT
T ss_pred hCChhHccC-CcEEEEECchh
Confidence 875321112 34899999974
No 266
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.57 E-value=3.6e-07 Score=92.92 Aligned_cols=113 Identities=13% Similarity=0.023 Sum_probs=78.8
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCccccCCCC
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~~~~~ 249 (496)
+..++..++.+|||+|||+|..+..++...++ ..++++|+ +..+. ++++...++. +|.++.+|+.. + .+ .
T Consensus 177 ~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~-~--~p--~ 247 (348)
T 3lst_A 177 ARAGDFPATGTVADVGGGRGGFLLTVLREHPG-LQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR-E--VP--H 247 (348)
T ss_dssp HHHSCCCSSEEEEEETCTTSHHHHHHHHHCTT-EEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT-C--CC--C
T ss_pred HHhCCccCCceEEEECCccCHHHHHHHHHCCC-CEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCC-C--CC--C
Confidence 34456678899999999999999999998754 68999999 44444 3334444543 59999999862 1 22 7
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
||+|++-- + ...+...+ ...+|.++.+.| +|||+|+..+..+.
T Consensus 248 ~D~v~~~~------v-------lh~~~d~~-------~~~~L~~~~~~L----kpgG~l~i~e~~~~ 290 (348)
T 3lst_A 248 ADVHVLKR------I-------LHNWGDED-------SVRILTNCRRVM----PAHGRVLVIDAVVP 290 (348)
T ss_dssp CSEEEEES------C-------GGGSCHHH-------HHHHHHHHHHTC----CTTCEEEEEECCBC
T ss_pred CcEEEEeh------h-------ccCCCHHH-------HHHHHHHHHHhc----CCCCEEEEEEeccC
Confidence 99999721 1 11233222 145788888886 99999999876543
No 267
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.54 E-value=2.9e-07 Score=89.97 Aligned_cols=107 Identities=15% Similarity=0.072 Sum_probs=76.5
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.+..+|||+|||.|-.++.+. +...++|+|||+.+++.+++++.++|. +..+...|....+. .+.||+||+.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~-~~~~~v~D~~~~~~---~~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDW-DFTFALQDVLCAPP---AEAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTC-EEEEEECCTTTSCC---CCBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeecccCCC---CCCcchHHHH
Confidence 356799999999999988665 457999999999999999999999995 56777788765442 2689999872
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE-eCCCC
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS-TCSIM 316 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS-TCSl~ 316 (496)
++ +..|...++..+...++.| +++|.+|-. |-|+.
T Consensus 176 ------------------k~---lh~LE~q~~~~~~~ll~aL----~~~~vvVsfPtksl~ 211 (253)
T 3frh_A 176 ------------------KL---LPLLEREQAGSAMALLQSL----NTPRMAVSFPTRSLG 211 (253)
T ss_dssp ------------------SC---HHHHHHHSTTHHHHHHHHC----BCSEEEEEEECC---
T ss_pred ------------------HH---HHHhhhhchhhHHHHHHHh----cCCCEEEEcChHHhc
Confidence 22 3334444555555777776 887766532 34553
No 268
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.52 E-value=5.8e-08 Score=96.66 Aligned_cols=85 Identities=20% Similarity=0.211 Sum_probs=72.0
Q ss_pred HHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc---C
Q 011002 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---G 246 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~---~ 246 (496)
++.+|++++|..+||++||.||.|..|++. .|.|+|+|.++.+++.+++ +.. .++.++++|..++...+ .
T Consensus 14 ~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~~~g 86 (285)
T 1wg8_A 14 ALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLAALG 86 (285)
T ss_dssp HHHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHHHTT
T ss_pred HHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHHHcC
Confidence 356678899999999999999999999987 4899999999999999988 644 57999999998875432 2
Q ss_pred CCCCCEEEECCCCCC
Q 011002 247 LNTVDRVLLDAPCSG 261 (496)
Q Consensus 247 ~~~FD~VLlDpPCSg 261 (496)
...||.||+|.++|.
T Consensus 87 ~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 87 VERVDGILADLGVSS 101 (285)
T ss_dssp CSCEEEEEEECSCCH
T ss_pred CCCcCEEEeCCcccc
Confidence 257999999999886
No 269
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.51 E-value=1.5e-07 Score=92.87 Aligned_cols=109 Identities=20% Similarity=0.117 Sum_probs=78.1
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEECC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDp 257 (496)
+..+|||+|||.|-.++.++... +...++|+|+|+.+++.++.|+..+|+. ..+...|...-+ ..+.||+||+.
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~~---p~~~~DvaL~l- 205 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLEDR---LDEPADVTLLL- 205 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTSC---CCSCCSEEEET-
T ss_pred CCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeecccC---CCCCcchHHHH-
Confidence 35699999999999998887754 3579999999999999999999999997 667777765433 23789999872
Q ss_pred CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEE-EEeCCCC
Q 011002 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIV-YSTCSIM 316 (496)
Q Consensus 258 PCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LV-YSTCSl~ 316 (496)
++ +..|...|+..+...++.| ++||.+| +=|-|+.
T Consensus 206 -----------------kt---i~~Le~q~kg~g~~ll~aL----~~~~vvVSfp~ksl~ 241 (281)
T 3lcv_B 206 -----------------KT---LPCLETQQRGSGWEVIDIV----NSPNIVVTFPTKSLG 241 (281)
T ss_dssp -----------------TC---HHHHHHHSTTHHHHHHHHS----SCSEEEEEEECC---
T ss_pred -----------------HH---HHHhhhhhhHHHHHHHHHh----CCCCEEEeccchhhc
Confidence 22 3333334443444777776 8988776 3344443
No 270
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.50 E-value=1.1e-06 Score=89.78 Aligned_cols=116 Identities=14% Similarity=0.044 Sum_probs=87.8
Q ss_pred hcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCE
Q 011002 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 173 ~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~ 252 (496)
.++..+..+|||+|||+|..+..+++..++ ..++..|. +..++.+++++...+.++|.++.+|+...+ . ..+|+
T Consensus 174 ~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~-~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~--~--~~~D~ 247 (353)
T 4a6d_A 174 AFDLSVFPLMCDLGGGAGALAKECMSLYPG-CKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDP--L--PEADL 247 (353)
T ss_dssp SSCGGGCSEEEEETCTTSHHHHHHHHHCSS-CEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSC--C--CCCSE
T ss_pred hcCcccCCeEEeeCCCCCHHHHHHHHhCCC-ceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCC--C--CCceE
Confidence 345567789999999999999999999875 67888887 889999998887777788999999986543 2 46899
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~e 318 (496)
|++ -.+...|+..+. .+||.++.+.| +|||+|+....-+.+.
T Consensus 248 ~~~-------------~~vlh~~~d~~~-------~~iL~~~~~al----~pgg~lli~e~~~~~~ 289 (353)
T 4a6d_A 248 YIL-------------ARVLHDWADGKC-------SHLLERIYHTC----KPGGGILVIESLLDED 289 (353)
T ss_dssp EEE-------------ESSGGGSCHHHH-------HHHHHHHHHHC----CTTCEEEEEECCCCTT
T ss_pred EEe-------------eeecccCCHHHH-------HHHHHHHHhhC----CCCCEEEEEEeeeCCC
Confidence 987 112334554433 45788888887 9999999988766543
No 271
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.50 E-value=3.6e-08 Score=102.50 Aligned_cols=108 Identities=6% Similarity=0.041 Sum_probs=73.9
Q ss_pred HhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEE--EEecCCCCCccccCCCC
Q 011002 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTI--VCNYDGNELPKVLGLNT 249 (496)
Q Consensus 172 ~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~--v~~~D~~~l~~~~~~~~ 249 (496)
..+.+.++.+|||+|||+|..+..++.. ...|+++|+|+.+++.++++ |+..+. +...++..++. ..+.
T Consensus 101 ~~~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~--~~~~ 171 (416)
T 4e2x_A 101 ATELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRR--TEGP 171 (416)
T ss_dssp HTTTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHH--HHCC
T ss_pred HHhCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhccc--CCCC
Confidence 3345678999999999999999988875 25899999999999888765 554322 11223322321 2378
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
||+|++. +++..-+ ....+|..+.++| +|||+|++++-.
T Consensus 172 fD~I~~~------~vl~h~~----------------d~~~~l~~~~r~L----kpgG~l~i~~~~ 210 (416)
T 4e2x_A 172 ANVIYAA------NTLCHIP----------------YVQSVLEGVDALL----APDGVFVFEDPY 210 (416)
T ss_dssp EEEEEEE------SCGGGCT----------------THHHHHHHHHHHE----EEEEEEEEEEEC
T ss_pred EEEEEEC------ChHHhcC----------------CHHHHHHHHHHHc----CCCeEEEEEeCC
Confidence 9999973 2221111 1245678888887 999999987643
No 272
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.50 E-value=1.2e-07 Score=91.71 Aligned_cols=100 Identities=12% Similarity=0.167 Sum_probs=66.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCc-cccCCCCCCEEEEC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP-KVLGLNTVDRVLLD 256 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~-~~~~~~~FD~VLlD 256 (496)
+|.+|||+|||+|+.|..+++. +...|+|+|+++.+++.+.++..+... ....+...+. ..+....||.+.+|
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~~ml~~a~~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~~~~D 110 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN--GAKLVYALDVGTNQLAWKIRSDERVVV----MEQFNFRNAVLADFEQGRPSFTSID 110 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSCCCCCHHHHTCTTEEE----ECSCCGGGCCGGGCCSCCCSEEEEC
T ss_pred CCCEEEEEccCCCHHHHHHHhc--CCCEEEEEcCCHHHHHHHHHhCccccc----cccceEEEeCHhHcCcCCCCEEEEE
Confidence 5779999999999999999886 235899999999999886665433211 1111211111 11211237888888
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
...+.. ..+|..+.++| +|||+|+..+
T Consensus 111 ~v~~~l-------------------------~~~l~~i~rvL----kpgG~lv~~~ 137 (232)
T 3opn_A 111 VSFISL-------------------------DLILPPLYEIL----EKNGEVAALI 137 (232)
T ss_dssp CSSSCG-------------------------GGTHHHHHHHS----CTTCEEEEEE
T ss_pred EEhhhH-------------------------HHHHHHHHHhc----cCCCEEEEEE
Confidence 764431 23577777876 9999999863
No 273
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.45 E-value=4e-07 Score=89.69 Aligned_cols=131 Identities=18% Similarity=0.124 Sum_probs=88.2
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHc------CCC-----cEEEEEeCCH---HHHH-----------HHHHHHHHc----
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALM------KNT-----GLIYANEMKA---SRLK-----------SLTANLHRM---- 226 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~------~~~-----g~V~AvDis~---~rl~-----------~l~~nl~r~---- 226 (496)
..++.+|||+|+|+|..++.+++.. .+. ..++++|..+ ..+. .+++++..+
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 4466899999999999998887764 332 4899999876 4444 445555541
Q ss_pred ----------CCceEEEEecCCCCCccccCC---CCCCEEEECC--CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHH
Q 011002 227 ----------GVTNTIVCNYDGNELPKVLGL---NTVDRVLLDA--PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLI 291 (496)
Q Consensus 227 ----------g~~nv~v~~~D~~~l~~~~~~---~~FD~VLlDp--PCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL 291 (496)
+..++.++.+|+.+....... ..||+|++|| |+ ++|++ |+ .++|
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~-------~~p~l---w~-----------~~~l 196 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPA-------KNPDM---WT-----------QNLF 196 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTT-------TCGGG---CC-----------HHHH
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcc-------cChhh---cC-----------HHHH
Confidence 224678999999874222211 2799999997 43 35543 22 2457
Q ss_pred HHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEEeec
Q 011002 292 LAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 292 ~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~~lv~~ 338 (496)
....++| +|||+|+..||+ ..|...|...+|.+...
T Consensus 197 ~~l~~~L----~pGG~l~tysaa-------~~vrr~L~~aGF~v~~~ 232 (257)
T 2qy6_A 197 NAMARLA----RPGGTLATFTSA-------GFVRRGLQEAGFTMQKR 232 (257)
T ss_dssp HHHHHHE----EEEEEEEESCCB-------HHHHHHHHHHTEEEEEE
T ss_pred HHHHHHc----CCCcEEEEEeCC-------HHHHHHHHHCCCEEEeC
Confidence 7777776 999999843332 36777777778877654
No 274
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.45 E-value=7.4e-08 Score=94.58 Aligned_cols=88 Identities=13% Similarity=0.057 Sum_probs=67.2
Q ss_pred hHHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccC--
Q 011002 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLG-- 246 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~-- 246 (496)
..+..+.+.+|++|||+|||+|..|. ++. . ..+.|+|+|+++.+++.+++++... .++.++++|+..++....
T Consensus 12 ~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~~~~~~ 86 (252)
T 1qyr_A 12 SIVSAINPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNFGELAE 86 (252)
T ss_dssp HHHHHHCCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCHHHHHH
T ss_pred HHHHhcCCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCHHHhhc
Confidence 44566778899999999999999999 653 2 2223999999999999999887543 579999999987642110
Q ss_pred -CCCCCEEEECCCCCC
Q 011002 247 -LNTVDRVLLDAPCSG 261 (496)
Q Consensus 247 -~~~FD~VLlDpPCSg 261 (496)
.+..|.|+.|+|+.-
T Consensus 87 ~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 87 KMGQPLRVFGNLPYNI 102 (252)
T ss_dssp HHTSCEEEEEECCTTT
T ss_pred ccCCceEEEECCCCCc
Confidence 024589999999754
No 275
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.42 E-value=2.3e-07 Score=91.90 Aligned_cols=127 Identities=14% Similarity=0.106 Sum_probs=73.7
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
++++.+||||||||||++..++...+ .+.|+|+|+..+....... ....|. ++.....++.... +....||+|++
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~-~~~~g~-~ii~~~~~~dv~~--l~~~~~DlVls 146 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMN-VQSLGW-NIITFKDKTDIHR--LEPVKCDTLLC 146 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCC-CCBTTG-GGEEEECSCCTTT--SCCCCCSEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCcccccc-cCcCCC-CeEEEeccceehh--cCCCCccEEEe
Confidence 46788999999999999998887643 3578888887332000000 011122 4444555442221 23478999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEEeCCCCCcCCHHHHHHH
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYSTCSIMVTENEAVIDYA 327 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpG-G~LVYSTCSl~~eENE~vV~~~ 327 (496)
|.--+ +|.. .+... .+..||.-|.+.| +|| |.+|.....-+..+-.+.+..+
T Consensus 147 D~apn-sG~~-------------~~D~~--rs~~LL~~a~~~L----kpG~G~FV~KVf~pyg~~~~~l~~~l 199 (277)
T 3evf_A 147 DIGES-SSSS-------------VTEGE--RTVRVLDTVEKWL----ACGVDNFCVKVLAPYMPDVLEKLELL 199 (277)
T ss_dssp CCCCC-CSCH-------------HHHHH--HHHHHHHHHHHHH----TTCCSEEEEEESCTTSHHHHHHHHHH
T ss_pred cCccC-cCch-------------HHHHH--HHHHHHHHHHHHh----CCCCCeEEEEecCCCCccHHHHHHHH
Confidence 96444 5531 11111 1233477788887 999 9999865443233433444443
No 276
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.36 E-value=3e-07 Score=93.58 Aligned_cols=88 Identities=17% Similarity=0.183 Sum_probs=72.9
Q ss_pred HHHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCC--
Q 011002 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGL-- 247 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~-- 247 (496)
++.+|.++||..++|+++|.||.|..|+..+++.|.|+|+|.++.+++.++ ++ .-.++.+++++..++...+..
T Consensus 49 vl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~~~Rv~lv~~nF~~l~~~L~~~g 124 (347)
T 3tka_A 49 AVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---DDPRFSIIHGPFSALGEYVAERD 124 (347)
T ss_dssp HHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---CCTTEEEEESCGGGHHHHHHHTT
T ss_pred HHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---cCCcEEEEeCCHHHHHHHHHhcC
Confidence 356678999999999999999999999999888899999999999999873 33 335699999998877543311
Q ss_pred --CCCCEEEECCCCCC
Q 011002 248 --NTVDRVLLDAPCSG 261 (496)
Q Consensus 248 --~~FD~VLlDpPCSg 261 (496)
+.+|.||+|-.||.
T Consensus 125 ~~~~vDgILfDLGVSS 140 (347)
T 3tka_A 125 LIGKIDGILLDLGVSS 140 (347)
T ss_dssp CTTCEEEEEEECSCCH
T ss_pred CCCcccEEEECCccCH
Confidence 26999999999985
No 277
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.35 E-value=2.1e-07 Score=92.36 Aligned_cols=113 Identities=15% Similarity=0.132 Sum_probs=68.1
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEec-CCCCCccccCCCCCCEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY-DGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~-D~~~l~~~~~~~~FD~VL 254 (496)
++++.+|||+||||||++.+++..++ ...|+++|+.......... ....|..-+.+... |...+ ....||+||
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~-~~~~g~~ii~~~~~~dv~~l----~~~~~DvVL 161 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIM-RTTLGWNLIRFKDKTDVFNM----EVIPGDTLL 161 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCGGGS----CCCCCSEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCccccccc-cccCCCceEEeeCCcchhhc----CCCCcCEEE
Confidence 46788999999999999998887654 3578899997542111000 01123222333222 33322 347899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC--cEEEEEeCC
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG--GYIVYSTCS 314 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpG--G~LVYSTCS 314 (496)
+|.--+ +|.. .+... .+..||.-|.+.| +|| |.+|.-...
T Consensus 162 SDmApn-sG~~-------------~~D~~--rs~~LL~~A~~~L----k~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 162 CDIGES-SPSI-------------AVEEQ--RTLRVLNCAKQWL----QEGNYTEFCIKVLC 203 (282)
T ss_dssp ECCCCC-CSCH-------------HHHHH--HHHHHHHHHHHHH----HHHCCCEEEEEESC
T ss_pred ecCccC-CCCh-------------HHHHH--HHHHHHHHHHHHc----CCCCCCcEEEEEec
Confidence 996444 6641 11111 2233477777877 999 999876543
No 278
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.34 E-value=5.2e-07 Score=98.23 Aligned_cols=75 Identities=13% Similarity=0.004 Sum_probs=65.1
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
.+-+|||+|||.|..+..||++ +..|+|+|+++..++.++..+...|.-+|.+.++|+.++......+.||+|+|
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIG 140 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEE
Confidence 4679999999999999999986 36899999999999999999999887789999999887744344478999997
No 279
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.34 E-value=3.6e-06 Score=85.59 Aligned_cols=104 Identities=14% Similarity=0.135 Sum_probs=76.2
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
..++.+|||+|||+|..+..++...++ ..++++|+ +.+++.+++ ..++.++.+|+.. + + ..||+|++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~--p~~D~v~~ 252 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPK-LKCIVFDR-PQVVENLSG------SNNLTYVGGDMFT-S--I--PNADAVLL 252 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCC------BTTEEEEECCTTT-C--C--CCCSEEEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCC-CeEEEeeC-HHHHhhccc------CCCcEEEeccccC-C--C--CCccEEEe
Confidence 346789999999999999999988754 68999999 988876654 2458999999865 2 2 23999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCC---CcEEEEEeCCCC
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS---GGYIVYSTCSIM 316 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkp---GG~LVYSTCSl~ 316 (496)
-- + ...+...+ ...+|.++.+.| +| ||+|+.+...+.
T Consensus 253 ~~------~-------lh~~~d~~-------~~~~l~~~~~~L----~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 253 KY------I-------LHNWTDKD-------CLRILKKCKEAV----TNDGKRGKVTIIDMVID 292 (352)
T ss_dssp ES------C-------GGGSCHHH-------HHHHHHHHHHHH----SGGGCCCEEEEEECEEC
T ss_pred eh------h-------hccCCHHH-------HHHHHHHHHHhC----CCCCCCcEEEEEEeecC
Confidence 21 1 11222221 235788888887 99 999998876654
No 280
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.33 E-value=5.1e-07 Score=90.18 Aligned_cols=126 Identities=10% Similarity=0.046 Sum_probs=74.0
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEec-CCCCCccccCCCCCCEEEE
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY-DGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~-D~~~l~~~~~~~~FD~VLl 255 (496)
.+|.+|||+||||||++..+++.++ ...|+++|+......... ....++.+-+.+... |...+ ....||+|++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~-~~~~~~~~iv~~~~~~di~~l----~~~~~DlVls 153 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPI-HMQTLGWNIVKFKDKSNVFTM----PTEPSDTLLC 153 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCC-CCCBTTGGGEEEECSCCTTTS----CCCCCSEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEeccccccccc-cccccCCceEEeecCceeeec----CCCCcCEEee
Confidence 5799999999999999999988653 357889998643100000 000112222333221 33333 2368999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEEeCCCCCcCCHHHHHHHH
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYSTCSIMVTENEAVIDYAL 328 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpG-G~LVYSTCSl~~eENE~vV~~~L 328 (496)
|.-.+ +|.. .+... .|..||.-|.+.| +|| |.+|.-....+..+-.+.+..+-
T Consensus 154 D~APn-sG~~-------------~~D~~--rs~~LL~~A~~~L----kpG~G~FV~KvF~~yG~~~~~ll~~lk 207 (300)
T 3eld_A 154 DIGES-SSNP-------------LVERD--RTMKVLENFERWK----HVNTENFCVKVLAPYHPDVIEKLERLQ 207 (300)
T ss_dssp CCCCC-CSSH-------------HHHHH--HHHHHHHHHHHHC----CTTCCEEEEEESSTTSHHHHHHHHHHH
T ss_pred cCcCC-CCCH-------------HHHHH--HHHHHHHHHHHHh----cCCCCcEEEEeccccCccHHHHHHHHH
Confidence 97766 7741 11111 2334477777776 999 99997654433444444444433
No 281
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.31 E-value=2.7e-06 Score=87.38 Aligned_cols=105 Identities=10% Similarity=0.085 Sum_probs=76.9
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
..++.+|||+|||+|..+..++...++ ..++++|+ +.+++.++. ..+|.++.+|+.. + ++ .. |+|++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~p-~~-D~v~~ 267 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPS-INAINFDL-PHVIQDAPA------FSGVEHLGGDMFD-G--VP-KG-DAIFI 267 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-C--CC-CC-SEEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCC-CEEEEEeh-HHHHHhhhh------cCCCEEEecCCCC-C--CC-CC-CEEEE
Confidence 456789999999999999999998754 68999999 887765543 2579999999875 3 22 23 99987
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~ 317 (496)
-- +...|+..+. .++|.++.+.| +|||+|+.....+..
T Consensus 268 ~~-------------vlh~~~~~~~-------~~~l~~~~~~L----~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 268 KW-------------ICHDWSDEHC-------LKLLKNCYAAL----PDHGKVIVAEYILPP 305 (368)
T ss_dssp ES-------------CGGGBCHHHH-------HHHHHHHHHHS----CTTCEEEEEECCCCS
T ss_pred ec-------------hhhcCCHHHH-------HHHHHHHHHHc----CCCCEEEEEEeccCC
Confidence 21 1122333322 45788888887 999999998876543
No 282
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.28 E-value=3.8e-06 Score=86.22 Aligned_cols=105 Identities=14% Similarity=0.131 Sum_probs=77.2
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
..++.+|||+|||+|..+..++...++ ..++++|+ +..++.++. ..+|.++.+|+.. + ++ .. |+|++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~~~-~--~p-~~-D~v~~ 265 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPT-IKGVNFDL-PHVISEAPQ------FPGVTHVGGDMFK-E--VP-SG-DTILM 265 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-C--CC-CC-SEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCC-CeEEEecC-HHHHHhhhh------cCCeEEEeCCcCC-C--CC-CC-CEEEe
Confidence 567899999999999999999998764 68999999 877765543 2579999999876 3 22 23 99987
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~ 317 (496)
-- +...|+..+. ..+|.++.+.| +|||+|+.....+..
T Consensus 266 ~~-------------vlh~~~d~~~-------~~~L~~~~~~L----~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 266 KW-------------ILHDWSDQHC-------ATLLKNCYDAL----PAHGKVVLVQCILPV 303 (364)
T ss_dssp ES-------------CGGGSCHHHH-------HHHHHHHHHHS----CTTCEEEEEECCBCS
T ss_pred hH-------------HhccCCHHHH-------HHHHHHHHHHc----CCCCEEEEEEeccCC
Confidence 11 1223433332 45788888887 999999998876543
No 283
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.21 E-value=7.5e-06 Score=83.39 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=75.1
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEEC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlD 256 (496)
.++.+|||+|||+|..+..++...++ ..++++|+ +.+++.+++ ..++.++.+|+.. + . ..||+|++.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~--~~~D~v~~~ 258 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPH-LKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-S--I--PSADAVLLK 258 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTT-SEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-C--C--CCCSEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCC-CeEEEecc-HHHHhhccc------CCCcEEEeCccCC-C--C--CCceEEEEc
Confidence 46789999999999999999998754 68999999 777765543 3568999999876 3 2 249999982
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCC---CcEEEEEeCCCC
Q 011002 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS---GGYIVYSTCSIM 316 (496)
Q Consensus 257 pPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkp---GG~LVYSTCSl~ 316 (496)
-. ...+...+ ...+|.++.+.| +| ||+|+.....+.
T Consensus 259 ~v-------------lh~~~d~~-------~~~~l~~~~~~L----~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 259 WV-------------LHDWNDEQ-------SLKILKNSKEAI----SHKGKDGKVIIIDISID 297 (358)
T ss_dssp SC-------------GGGSCHHH-------HHHHHHHHHHHT----GGGGGGCEEEEEECEEC
T ss_pred cc-------------ccCCCHHH-------HHHHHHHHHHhC----CCCCCCcEEEEEEeccC
Confidence 11 11222221 135788888887 99 999998876653
No 284
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.20 E-value=4e-06 Score=85.93 Aligned_cols=103 Identities=10% Similarity=0.065 Sum_probs=75.7
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
..++.+|||+|||+|..+..++...++ ..++++|+ +.+++.+++ ..++.++.+|+.. + ++ .||+|++
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~~--~~D~v~~ 273 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPL-IKGINFDL-PQVIENAPP------LSGIEHVGGDMFA-S--VP--QGDAMIL 273 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-C--CC--CEEEEEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCC-CeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc-C--CC--CCCEEEE
Confidence 567889999999999999999998754 68999999 888876553 2568999999876 3 22 3999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 256 DpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
. .++ ..+.... ...+|.++.+.| +|||+|+.+...+
T Consensus 274 ~------~~l-------h~~~d~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~ 309 (372)
T 1fp1_D 274 K------AVC-------HNWSDEK-------CIEFLSNCHKAL----SPNGKVIIVEFIL 309 (372)
T ss_dssp E------SSG-------GGSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEEEE
T ss_pred e------ccc-------ccCCHHH-------HHHHHHHHHHhc----CCCCEEEEEEecc
Confidence 2 111 1222221 135788888887 9999999886554
No 285
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.18 E-value=2.6e-06 Score=84.87 Aligned_cols=106 Identities=19% Similarity=0.178 Sum_probs=66.9
Q ss_pred CCCCCCeEeeccc------CCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCC
Q 011002 175 APQEKERVIDMAA------APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 175 ~~~~g~~VLDlcA------GpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~ 248 (496)
.+.-|++|||+|| +||+. .+.+..+.++.|+++|+++--. ..+ .++.+|...+.. ..
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s-----------da~-~~IqGD~~~~~~---~~ 168 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS-----------DAD-STLIGDCATVHT---AN 168 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC-----------SSS-EEEESCGGGEEE---SS
T ss_pred eecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc-----------CCC-eEEEcccccccc---CC
Confidence 4567999999997 99993 4555544335999999986211 122 448899765432 37
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.||+||.|.-...+|...- +.++ + .. |.+.|+++....|+|||.||.=.
T Consensus 169 k~DLVISDMAPNtTG~~D~-d~~R---s-~~----------L~ElALdfA~~~LkpGGsFvVKV 217 (344)
T 3r24_A 169 KWDLIISDMYDPRTKHVTK-ENDS---K-EG----------FFTYLCGFIKQKLALGGSIAVKI 217 (344)
T ss_dssp CEEEEEECCCCTTSCSSCS-CCCC---C-CT----------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEEEecCCCCcCCcccc-chhH---H-HH----------HHHHHHHHHHHhCcCCCEEEEEE
Confidence 8999999987777776221 1111 0 11 23333444444459999998753
No 286
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.16 E-value=2.8e-06 Score=84.79 Aligned_cols=126 Identities=10% Similarity=0.118 Sum_probs=89.6
Q ss_pred CCeEeecccCCcHHHHHHHHHcC----CCcEEEEEeCCH--------------------------HHHHHHHHHHHHcCC
Q 011002 179 KERVIDMAAAPGGKTTYIAALMK----NTGLIYANEMKA--------------------------SRLKSLTANLHRMGV 228 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~----~~g~V~AvDis~--------------------------~rl~~l~~nl~r~g~ 228 (496)
...||++|++.|+.+++|+..+. ..+.|+++|... .+++.+++|+.+.|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 45999999999999999998774 257899999641 157789999999998
Q ss_pred --ceEEEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc
Q 011002 229 --TNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG 306 (496)
Q Consensus 229 --~nv~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG 306 (496)
++|.++.+|+.+.......+.||.|++|+- . ..-....|..++..| +|||
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD---~---------------------y~~~~~~Le~~~p~L----~pGG 238 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD---L---------------------YESTWDTLTNLYPKV----SVGG 238 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEECCC---S---------------------HHHHHHHHHHHGGGE----EEEE
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC---c---------------------cccHHHHHHHHHhhc----CCCE
Confidence 579999999865322233468999999973 0 011133466666665 9999
Q ss_pred EEEEEeCCCCCcCCHHHHHHHHHhCCc
Q 011002 307 YIVYSTCSIMVTENEAVIDYALKKRDV 333 (496)
Q Consensus 307 ~LVYSTCSl~~eENE~vV~~~L~~~~~ 333 (496)
+||.-...+.+.+ ..-|+.|++++++
T Consensus 239 iIv~DD~~~~~G~-~~Av~Ef~~~~~i 264 (282)
T 2wk1_A 239 YVIVDDYMMCPPC-KDAVDEYRAKFDI 264 (282)
T ss_dssp EEEESSCTTCHHH-HHHHHHHHHHTTC
T ss_pred EEEEcCCCCCHHH-HHHHHHHHHhcCC
Confidence 9998776443433 3445556666653
No 287
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.14 E-value=1.1e-05 Score=78.18 Aligned_cols=79 Identities=23% Similarity=0.219 Sum_probs=56.2
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEec-CCCCCccccCCCCCCEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY-DGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~-D~~~l~~~~~~~~FD~VL 254 (496)
+.++.+|||+||||||++.+++.+.+. ..|+|+|+-..--+ --..++.+|...|.+..+ |...++. ..+|.||
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~-~~V~avdvG~~ghe-~P~~~~s~gwn~v~fk~gvDv~~~~~----~~~Dtll 149 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKV-TEVRGYTKGGPGHE-EPVPMSTYGWNIVKLMSGKDVFYLPP----EKCDTLL 149 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTE-EEEEEECCCSTTSC-CCCCCCCTTTTSEEEECSCCGGGCCC----CCCSEEE
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCC-CEEEEEecCCCCcc-CcchhhhcCcCceEEEeccceeecCC----ccccEEE
Confidence 468899999999999999988877543 58999998653210 000123456777999988 8654443 5699999
Q ss_pred EC-CCCC
Q 011002 255 LD-APCS 260 (496)
Q Consensus 255 lD-pPCS 260 (496)
|| +|.|
T Consensus 150 cDIgeSs 156 (267)
T 3p8z_A 150 CDIGESS 156 (267)
T ss_dssp ECCCCCC
T ss_pred EecCCCC
Confidence 99 4533
No 288
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.14 E-value=1.3e-06 Score=90.20 Aligned_cols=73 Identities=16% Similarity=0.199 Sum_probs=56.1
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLl 255 (496)
+.+|++|||+||+|||+|..+++. ++.|+|+|+.+- ...+ +...+|.++.+|+..+... ...||.|++
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l-----~~~l--~~~~~V~~~~~d~~~~~~~--~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPM-----AQSL--MDTGQVTWLREDGFKFRPT--RSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCC-----CHHH--HTTTCEEEECSCTTTCCCC--SSCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhc-----Chhh--ccCCCeEEEeCccccccCC--CCCcCEEEE
Confidence 568999999999999999998875 479999997641 1112 2346799999999877532 368999999
Q ss_pred CCCCC
Q 011002 256 DAPCS 260 (496)
Q Consensus 256 DpPCS 260 (496)
|.-|.
T Consensus 277 Dm~~~ 281 (375)
T 4auk_A 277 DMVEK 281 (375)
T ss_dssp CCSSC
T ss_pred cCCCC
Confidence 98643
No 289
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.02 E-value=5.2e-06 Score=82.66 Aligned_cols=149 Identities=15% Similarity=0.086 Sum_probs=95.0
Q ss_pred CCCCcccccceEEEec----CcchhH--HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHH
Q 011002 149 IGATPEYMAGFYMLQS----ASSFLP--VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTAN 222 (496)
Q Consensus 149 i~~~~~~~~G~~~iQd----~sS~l~--v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~n 222 (496)
...|.||..|-.-+-. ....+. ...+..-.+..+||+.+|+|..++.+.. ....++.+|.++..++.+++|
T Consensus 56 a~ktgE~~~GI~rl~~~~~~~p~~l~~yf~~l~~~n~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~N 132 (283)
T 2oo3_A 56 SLKTEEYKEGINPVWLDRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLR---SQDRLYLCELHPTEYNFLLKL 132 (283)
T ss_dssp ---CCGGGGTHHHHHHTGGGSCGGGHHHHHHHHHHSSSSSCCEEECHHHHHHHHSC---TTSEEEEECCSHHHHHHHTTS
T ss_pred HhhcHHHHHHHHHHHhcccCCcHHHHHHHHHHHHhcCCCceeEeCCcHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHH
Confidence 3568899988654422 111111 1111112466799999999999986554 346899999999999999999
Q ss_pred HHHcCCceEEEEecCCCCCcccc--CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhh
Q 011002 223 LHRMGVTNTIVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDA 300 (496)
Q Consensus 223 l~r~g~~nv~v~~~D~~~l~~~~--~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~ 300 (496)
+.. ..++.+.+.|+......+ +...||+||+|||+--.+ +.... .+.|..+...
T Consensus 133 l~~--~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPYe~k~---------------~~~~v----l~~L~~~~~r--- 188 (283)
T 2oo3_A 133 PHF--NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKE---------------EYKEI----PYAIKNAYSK--- 188 (283)
T ss_dssp CCT--TSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCCCSTT---------------HHHHH----HHHHHHHHHH---
T ss_pred hCc--CCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCCCCCc---------------HHHHH----HHHHHHhCcc---
Confidence 976 356999999975532211 124799999999974211 11111 2234444444
Q ss_pred cCCCCcEEEEEeCCCCCcCCHHHHHHHHHh
Q 011002 301 NSKSGGYIVYSTCSIMVTENEAVIDYALKK 330 (496)
Q Consensus 301 ~lkpGG~LVYSTCSl~~eENE~vV~~~L~~ 330 (496)
-++|+++. |.|--+...++.+++.
T Consensus 189 --~~~Gi~v~----WYPi~~~~~~~~~~~~ 212 (283)
T 2oo3_A 189 --FSTGLYCV----WYPVVNKAWTEQFLRK 212 (283)
T ss_dssp --CTTSEEEE----EEEESSHHHHHHHHHH
T ss_pred --CCCeEEEE----EEeccchHHHHHHHHH
Confidence 68898766 6777777777777654
No 290
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.98 E-value=4.8e-06 Score=75.60 Aligned_cols=114 Identities=11% Similarity=0.063 Sum_probs=75.2
Q ss_pred cCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc-cCCCCCCE
Q 011002 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDR 252 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~-~~~~~FD~ 252 (496)
+++.+|++|||+|||. +++|+++.+++.+++++.. ++.+..+|+..++.. +..+.||+
T Consensus 8 ~g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp TTCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred cCCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc----CcEEEEechhcCccccCCCCCEeE
Confidence 4678999999999985 2389999999999887632 377888898877531 13478999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc------CCHHHHHH
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT------ENEAVIDY 326 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~e------ENE~vV~~ 326 (496)
|++.- ....+..+ ...+|..+.++| ||||+|+++.-..... -..+.+..
T Consensus 67 V~~~~---~l~~~~~~------------------~~~~l~~~~r~L----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 121 (176)
T 2ld4_A 67 ILSGL---VPGSTTLH------------------SAEILAEIARIL----RPGGCLFLKEPVETAVDNNSKVKTASKLCS 121 (176)
T ss_dssp EEECC---STTCCCCC------------------CHHHHHHHHHHE----EEEEEEEEEEEEESSSCSSSSSCCHHHHHH
T ss_pred EEECC---hhhhcccC------------------HHHHHHHHHHHC----CCCEEEEEEcccccccccccccCCHHHHHH
Confidence 99731 11111011 134678888887 9999999854221110 12455556
Q ss_pred HHHhCCc
Q 011002 327 ALKKRDV 333 (496)
Q Consensus 327 ~L~~~~~ 333 (496)
.|...++
T Consensus 122 ~l~~aGf 128 (176)
T 2ld4_A 122 ALTLSGL 128 (176)
T ss_dssp HHHHTTC
T ss_pred HHHHCCC
Confidence 6777777
No 291
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.92 E-value=9.1e-05 Score=76.69 Aligned_cols=81 Identities=21% Similarity=0.277 Sum_probs=61.0
Q ss_pred CeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc-c-----CCCCCCEE
Q 011002 180 ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-L-----GLNTVDRV 253 (496)
Q Consensus 180 ~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~-~-----~~~~FD~V 253 (496)
.+|||+|||.||.++-+.+. +--.|+|+|+++..++..+.|. .+..++++|...+... + ....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 58999999999999988765 2346889999999999998885 3456778888876321 1 23679999
Q ss_pred EECCCCCCCCcccC
Q 011002 254 LLDAPCSGTGVISK 267 (496)
Q Consensus 254 LlDpPCSg~Gvi~r 267 (496)
+.+|||.+.....+
T Consensus 76 ~ggpPCQ~fS~ag~ 89 (376)
T 3g7u_A 76 IGGPPCQGFSSIGK 89 (376)
T ss_dssp EECCCCCTTC----
T ss_pred EecCCCCCcccccC
Confidence 99999998876544
No 292
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.81 E-value=0.00025 Score=71.08 Aligned_cols=117 Identities=15% Similarity=0.108 Sum_probs=82.6
Q ss_pred HHhcCCCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--C---CceEEEEecCCCCCcccc
Q 011002 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--G---VTNTIVCNYDGNELPKVL 245 (496)
Q Consensus 171 v~~L~~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~--g---~~nv~v~~~D~~~l~~~~ 245 (496)
++++.+. ..+||=+|.|.|+.+..++..- +...|+.+||++..++.+++-+..+ | -.++.++.+|+..+....
T Consensus 77 ~l~~~p~-pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~ 154 (294)
T 3o4f_A 77 PLLAHGH-AKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT 154 (294)
T ss_dssp HHHHSSC-CCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS
T ss_pred HHhhCCC-CCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc
Confidence 3444444 4699999999999988777653 3358999999999999999887543 2 245999999999886533
Q ss_pred CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.++||+|++|.+-. .|. +... . ..+.+..+.+.| +|||.+|.-+
T Consensus 155 -~~~yDvIi~D~~dp-~~~----~~~L--~-----------t~eFy~~~~~~L----~p~Gv~v~q~ 198 (294)
T 3o4f_A 155 -SQTFDVIISDCTDP-IGP----GESL--F-----------TSAFYEGCKRCL----NPGGIFVAQN 198 (294)
T ss_dssp -SCCEEEEEESCCCC-CCT----TCCS--S-----------CCHHHHHHHHTE----EEEEEEEEEE
T ss_pred -cccCCEEEEeCCCc-CCC----chhh--c-----------CHHHHHHHHHHh----CCCCEEEEec
Confidence 47899999998631 121 0001 1 123456666666 9999998643
No 293
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.80 E-value=1.1e-05 Score=82.53 Aligned_cols=83 Identities=14% Similarity=0.195 Sum_probs=56.1
Q ss_pred CeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc-ccCCCCCCEEEECCC
Q 011002 180 ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK-VLGLNTVDRVLLDAP 258 (496)
Q Consensus 180 ~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~-~~~~~~FD~VLlDpP 258 (496)
.+|||++||.||.++.+...--.-..|+|+|+++.+++..+.|.. +..++++|...+.. .+....+|+|+.+||
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~~~~~~~~D~l~~gpP 77 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLEEFDRLSFDMILMSPP 77 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHHHHHHHCCSEEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHhHcCcCCcCEEEEcCC
Confidence 579999999999999887752111379999999999999999864 23466788877642 111126999999999
Q ss_pred CCCCCcccC
Q 011002 259 CSGTGVISK 267 (496)
Q Consensus 259 CSg~Gvi~r 267 (496)
|.+..+..+
T Consensus 78 Cq~fS~ag~ 86 (343)
T 1g55_A 78 CQPFTRIGR 86 (343)
T ss_dssp ---------
T ss_pred CcchhhcCC
Confidence 988876543
No 294
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.76 E-value=1.9e-05 Score=87.30 Aligned_cols=122 Identities=11% Similarity=0.059 Sum_probs=79.4
Q ss_pred CCeEeecccCCcHHHHHHHHH---cC---------CCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccc-
Q 011002 179 KERVIDMAAAPGGKTTYIAAL---MK---------NTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKV- 244 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l---~~---------~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~- 244 (496)
+..|||+|||+|-.+..++.. .+ ...+|+|+|.|+..+..++.... +|+.+ |+++.+|++++...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 457999999999997543222 22 23499999999988877776664 78876 99999999987431
Q ss_pred --cCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC--CCCcCC
Q 011002 245 --LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS--IMVTEN 320 (496)
Q Consensus 245 --~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS--l~~eEN 320 (496)
...+++|+|+...- |.+. ...+..+.|..+-+ .|+|||.++=+.|+ +.|-+.
T Consensus 489 ~~~~~ekVDIIVSElm----Gsfl----------------~nEL~pe~Ld~v~r----~Lkp~Gi~iP~~~t~ylaPi~~ 544 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL----GSFG----------------DNELSPECLDGVTG----FLKPTTISIPQKYTSYVKPIMS 544 (745)
T ss_dssp HHTTCCCCSEEEECCC----BTTB----------------GGGSHHHHHHTTGG----GSCTTCEEESCEEEEEEEEEEC
T ss_pred ccCCCCcccEEEEecc----cccc----------------chhccHHHHHHHHH----hCCCCcEEECCccEEEEEEecC
Confidence 01378999998654 2211 00112334444434 46999999855555 444566
Q ss_pred HHHHH
Q 011002 321 EAVID 325 (496)
Q Consensus 321 E~vV~ 325 (496)
+..-.
T Consensus 545 ~~l~~ 549 (745)
T 3ua3_A 545 THIHQ 549 (745)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65433
No 295
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.73 E-value=3.7e-05 Score=84.62 Aligned_cols=119 Identities=13% Similarity=0.057 Sum_probs=79.2
Q ss_pred CCeEeecccCCcHH---HHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCCccccCCCCCCEEE
Q 011002 179 KERVIDMAAAPGGK---TTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 179 g~~VLDlcAGpGgk---tl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n-v~v~~~D~~~l~~~~~~~~FD~VL 254 (496)
+..|||+|||+|-. ++.+++......+|+|+|.|+. ...+.+....+|..+ |+++++|++++.. ++++|+|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~~~dkVtVI~gd~eev~L---PEKVDIIV 433 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEEWGSQVTVVSSDMREWVA---PEKADIIV 433 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHTTGGGEEEEESCTTTCCC---SSCEEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhccCCCeEEEEeCcceeccC---CcccCEEE
Confidence 35799999999988 4444444333237999999984 556777888999976 9999999998743 27899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC--CcCCHHHHH
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM--VTENEAVID 325 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~--~eENE~vV~ 325 (496)
...= |.+.+ .+. ...+|.++-+. |||||.++=+.|+++ +-+.+..-.
T Consensus 434 SEwM--G~fLl---------------~E~---mlevL~Ardr~----LKPgGimiPs~atlyiapi~~~~l~~ 482 (637)
T 4gqb_A 434 SELL--GSFAD---------------NEL---SPECLDGAQHF----LKDDGVSIPGEYTSFLAPISSSKLYN 482 (637)
T ss_dssp CCCC--BTTBG---------------GGC---HHHHHHHHGGG----EEEEEEEESCEEEEEEEEEECHHHHH
T ss_pred EEcC--ccccc---------------ccC---CHHHHHHHHHh----cCCCcEEccccceEEEEEecCHHHHH
Confidence 8642 22111 011 11345544444 599999986666543 446655433
No 296
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.72 E-value=7.1e-05 Score=76.05 Aligned_cols=80 Identities=19% Similarity=0.230 Sum_probs=61.9
Q ss_pred CCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEECCC
Q 011002 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAP 258 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDpP 258 (496)
+.+|||++||.||.++.+... +-..|+++|+++..++..+.|..... ++|...+.... ...+|+|+.+||
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~~-------~~Di~~~~~~~-~~~~D~l~~gpP 80 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEKP-------EGDITQVNEKT-IPDHDILCAGFP 80 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCCC-------BSCGGGSCGGG-SCCCSEEEEECC
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCCC-------cCCHHHcCHhh-CCCCCEEEECCC
Confidence 578999999999999887764 23479999999999999999974321 57877764321 146999999999
Q ss_pred CCCCCcccCC
Q 011002 259 CSGTGVISKD 268 (496)
Q Consensus 259 CSg~Gvi~r~ 268 (496)
|.+..+..+.
T Consensus 81 CQ~fS~ag~~ 90 (327)
T 2c7p_A 81 CQAFSISGKQ 90 (327)
T ss_dssp CTTTCTTSCC
T ss_pred CCCcchhccc
Confidence 9988766543
No 297
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.66 E-value=0.00019 Score=71.60 Aligned_cols=77 Identities=17% Similarity=0.150 Sum_probs=53.9
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEec-CCCCCccccCCCCCCEEE
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY-DGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~-D~~~l~~~~~~~~FD~VL 254 (496)
+.++.+|||+||||||++.+++.+.+ ...|+|+|+-..--+ --..++.+|...|.+... |...++. ..+|.|+
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he-~P~~~~ql~w~lV~~~~~~Dv~~l~~----~~~D~iv 165 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHE-EPQLVQSYGWNIVTMKSGVDVFYRPS----ECCDTLL 165 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSC-CCCCCCBTTGGGEEEECSCCTTSSCC----CCCSEEE
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCcc-CcchhhhcCCcceEEEeccCHhhCCC----CCCCEEE
Confidence 46888999999999999998877654 348999999754110 000012344445778776 8776654 5699999
Q ss_pred ECCC
Q 011002 255 LDAP 258 (496)
Q Consensus 255 lDpP 258 (496)
||.-
T Consensus 166 cDig 169 (321)
T 3lkz_A 166 CDIG 169 (321)
T ss_dssp ECCC
T ss_pred EECc
Confidence 9986
No 298
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.60 E-value=0.00012 Score=75.75 Aligned_cols=121 Identities=14% Similarity=0.124 Sum_probs=79.7
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc-----CC---ceEEEEecCCCCCcccc--CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-----GV---TNTIVCNYDGNELPKVL--GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~-----g~---~nv~v~~~D~~~l~~~~--~~ 247 (496)
+..+||=+|.|-|+....+... + ...|+.|||++..++.+++-+..+ .. +++.++..|+..+.... ..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 4579999999999998887764 3 368999999999999999875332 11 23789999998764311 23
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEE-EeCCCC
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY-STCSIM 316 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVY-STCSl~ 316 (496)
..||+|++|.+-...+. .|.- .. ..-..++++..+.+.| +|||.+|. +.|-+.
T Consensus 283 ~~yDvIIvDl~D~~~s~---~p~g---~a------~~Lft~eFy~~~~~~L----~p~GVlv~Q~~s~~~ 336 (381)
T 3c6k_A 283 REFDYVINDLTAVPIST---SPEE---DS------TWEFLRLILDLSMKVL----KQDGKYFTQGNCVNL 336 (381)
T ss_dssp CCEEEEEEECCSSCCCC---C-------C------HHHHHHHHHHHHHHTE----EEEEEEEEEEEETTC
T ss_pred CceeEEEECCCCCcccC---cccC---cc------hHHHHHHHHHHHHHhc----CCCCEEEEecCCCcc
Confidence 57999999975211110 0100 00 0123455677777776 99999986 444443
No 299
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.20 E-value=0.00051 Score=61.98 Aligned_cols=64 Identities=14% Similarity=0.102 Sum_probs=49.0
Q ss_pred CCCCeEeecccCCc-HHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEE-E
Q 011002 177 QEKERVIDMAAAPG-GKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRV-L 254 (496)
Q Consensus 177 ~~g~~VLDlcAGpG-gktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~V-L 254 (496)
.++.+|||+|||+| ..+.+|+... ...|+|+|+++..+. ++..|..+..... ...||+| .
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~---------------~v~dDiF~P~~~~-Y~~~DLIYs 95 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG---------------IVRDDITSPRMEI-YRGAALIYS 95 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT---------------EECCCSSSCCHHH-HTTEEEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc---------------eEEccCCCCcccc-cCCcCEEEE
Confidence 45789999999999 5888888743 246999999997765 7778886642211 1489999 9
Q ss_pred ECCC
Q 011002 255 LDAP 258 (496)
Q Consensus 255 lDpP 258 (496)
++||
T Consensus 96 irPP 99 (153)
T 2k4m_A 96 IRPP 99 (153)
T ss_dssp ESCC
T ss_pred cCCC
Confidence 9998
No 300
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.19 E-value=0.00032 Score=71.29 Aligned_cols=78 Identities=13% Similarity=0.142 Sum_probs=58.2
Q ss_pred CCeEeecccCCcHHHHHHHHHcCCCcEE-EEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc-ccCCCCCCEEEEC
Q 011002 179 KERVIDMAAAPGGKTTYIAALMKNTGLI-YANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK-VLGLNTVDRVLLD 256 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~~~g~V-~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~-~~~~~~FD~VLlD 256 (496)
.-+|+|++||.||.++.+...--+.-.| +|+|+++..++..+.|.... +++.|..++.. .+....+|+|+..
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~------~~~~DI~~~~~~~i~~~~~Dil~gg 83 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE------VQVKNLDSISIKQIESLNCNTWFMS 83 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC------CBCCCTTTCCHHHHHHTCCCEEEEC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC------cccCChhhcCHHHhccCCCCEEEec
Confidence 4589999999999998876641011357 79999999999999986321 55788877632 1111269999999
Q ss_pred CCCCCC
Q 011002 257 APCSGT 262 (496)
Q Consensus 257 pPCSg~ 262 (496)
|||.+.
T Consensus 84 pPCQ~f 89 (327)
T 3qv2_A 84 PPCQPY 89 (327)
T ss_dssp CCCTTC
T ss_pred CCccCc
Confidence 999998
No 301
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.15 E-value=0.0015 Score=65.49 Aligned_cols=79 Identities=16% Similarity=0.147 Sum_probs=60.5
Q ss_pred CeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEECCCC
Q 011002 180 ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (496)
Q Consensus 180 ~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDpPC 259 (496)
.+|||++||.||.++-+-+. +--.|.|+|+++.+++..+.|. + -.++.+|.+++.... ...+|+|+.-|||
T Consensus 1 mkvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~---~---~~~~~~DI~~i~~~~-~~~~D~l~ggpPC 71 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNH---S---AKLIKGDISKISSDE-FPKCDGIIGGPPS 71 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHC---C---SEEEESCGGGCCGGG-SCCCSEEECCCCG
T ss_pred CeEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHC---C---CCcccCChhhCCHhh-CCcccEEEecCCC
Confidence 37999999999999877653 2237889999999999998884 2 246678988774321 2579999999999
Q ss_pred CCCCcccC
Q 011002 260 SGTGVISK 267 (496)
Q Consensus 260 Sg~Gvi~r 267 (496)
.+..+..+
T Consensus 72 Q~fS~ag~ 79 (331)
T 3ubt_Y 72 QSWSEGGS 79 (331)
T ss_dssp GGTEETTE
T ss_pred CCcCCCCC
Confidence 88765543
No 302
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.14 E-value=0.00032 Score=71.44 Aligned_cols=82 Identities=16% Similarity=0.223 Sum_probs=59.7
Q ss_pred CeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc-ccCCCCCCEEEECCC
Q 011002 180 ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK-VLGLNTVDRVLLDAP 258 (496)
Q Consensus 180 ~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~-~~~~~~FD~VLlDpP 258 (496)
-+|+|++||.||.++.+...--+.-.|+|+|+++..++..+.|.. +..+.+.|...+.. .+....+|+|+..||
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~~~~~~~~D~l~ggpP 78 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQVIKKWNVDTILMSPP 78 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHHHHHHTTCCEEEECCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHHHhccCCCCEEEecCC
Confidence 479999999999998876652111358899999999999988863 23356778776632 111136999999999
Q ss_pred CCCCCccc
Q 011002 259 CSGTGVIS 266 (496)
Q Consensus 259 CSg~Gvi~ 266 (496)
|.+.....
T Consensus 79 CQ~fS~ag 86 (333)
T 4h0n_A 79 CQPFTRNG 86 (333)
T ss_dssp CCCSEETT
T ss_pred Ccchhhhh
Confidence 98875543
No 303
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.08 E-value=0.00047 Score=69.07 Aligned_cols=84 Identities=13% Similarity=0.141 Sum_probs=61.4
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcE-EEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc-c-CCCCCCEE
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGL-IYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-L-GLNTVDRV 253 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~-V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~-~-~~~~FD~V 253 (496)
..+.+|||++||.||.++.+... +-... |+|+|+++..++..+.|. .+..+..+|..++... + ....+|+|
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~-----~~~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH-----QGKIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT-----TTCEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC-----CCCceeCCChHHccHHHhcccCCcCEE
Confidence 45678999999999999877664 11112 799999999999888874 2345677888876421 1 11479999
Q ss_pred EECCCCCCCCccc
Q 011002 254 LLDAPCSGTGVIS 266 (496)
Q Consensus 254 LlDpPCSg~Gvi~ 266 (496)
+..|||.+..+..
T Consensus 88 ~ggpPCQ~fS~ag 100 (295)
T 2qrv_A 88 IGGSPCNDLSIVN 100 (295)
T ss_dssp EECCCCGGGBTTC
T ss_pred EecCCCccccccC
Confidence 9999998776553
No 304
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.04 E-value=0.0014 Score=65.04 Aligned_cols=49 Identities=14% Similarity=-0.008 Sum_probs=42.1
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV 228 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~ 228 (496)
.+|+.|||+|||+|..++.++.+ ...++++|+++..++.+++++.....
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~~ 282 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREVP 282 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHST
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 68999999999999988776654 25899999999999999999988643
No 305
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.98 E-value=0.0026 Score=64.04 Aligned_cols=131 Identities=16% Similarity=0.093 Sum_probs=79.8
Q ss_pred CCCeEeecccCCcHHHHHHHH---HcCCCcE--EEEEeCCH--------HHHHHHHH-HHHHc---CCce--EEEEecCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAA---LMKNTGL--IYANEMKA--------SRLKSLTA-NLHRM---GVTN--TIVCNYDG 238 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~---l~~~~g~--V~AvDis~--------~rl~~l~~-nl~r~---g~~n--v~v~~~D~ 238 (496)
+.-+|||+|-|+|.-++.... ...+... .+++|..+ .-+..+.+ .++.+ .-.+ ..++.+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 345799999999986643332 2233343 56677532 11122222 22222 1123 45677898
Q ss_pred CCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc
Q 011002 239 NELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (496)
Q Consensus 239 ~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~e 318 (496)
......+....||+|++|+ . .-+++|+++ + .+++....+++ +|||+|+--||+
T Consensus 176 ~~~l~~l~~~~~Da~flDg-F----sP~kNPeLW---s-----------~e~f~~l~~~~----~pgg~laTYtaa---- 228 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDA-F----SPYKNPELW---T-----------LDFLSLIKERI----DEKGYWVSYSSS---- 228 (308)
T ss_dssp HHHGGGCCSCCEEEEEECC-S----CTTTSGGGG---S-----------HHHHHHHHTTE----EEEEEEEESCCC----
T ss_pred HHHHhhhcccceeEEEeCC-C----CcccCcccC---C-----------HHHHHHHHHHh----CCCcEEEEEeCc----
Confidence 7643333335799999996 1 115778863 3 34577777776 999999865555
Q ss_pred CCHHHHHHHHHhCCcEEeec
Q 011002 319 ENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 319 ENE~vV~~~L~~~~~~lv~~ 338 (496)
..|...|...||.+..+
T Consensus 229 ---g~VRR~L~~aGF~V~k~ 245 (308)
T 3vyw_A 229 ---LSVRKSLLTLGFKVGSS 245 (308)
T ss_dssp ---HHHHHHHHHTTCEEEEE
T ss_pred ---HHHHHHHHHCCCEEEec
Confidence 57889999989887654
No 306
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.87 E-value=0.0024 Score=66.59 Aligned_cols=63 Identities=16% Similarity=0.180 Sum_probs=53.5
Q ss_pred CCCCCCeEeecccCCcHHHHHHH-HHcCCCcEEEEEeCCHHHHHHHHHHHHH---cCC-ceEEEEecC
Q 011002 175 APQEKERVIDMAAAPGGKTTYIA-ALMKNTGLIYANEMKASRLKSLTANLHR---MGV-TNTIVCNYD 237 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA-~l~~~~g~V~AvDis~~rl~~l~~nl~r---~g~-~nv~v~~~D 237 (496)
.+.++..|+|+||+.|..|+.++ ...++.+.|+|+|.++..++.+++|+.. .+. .|+.+++.-
T Consensus 223 ~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~a 290 (409)
T 2py6_A 223 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCG 290 (409)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSE
T ss_pred ccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeE
Confidence 45789999999999999999988 4555558999999999999999999998 356 788877643
No 307
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.80 E-value=0.0016 Score=66.88 Aligned_cols=81 Identities=16% Similarity=0.079 Sum_probs=60.9
Q ss_pred ceEEEecCc-chhHHHhcCCCC------CCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce
Q 011002 158 GFYMLQSAS-SFLPVMALAPQE------KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN 230 (496)
Q Consensus 158 G~~~iQd~s-S~l~v~~L~~~~------g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n 230 (496)
|.-++.|.. ..-.+.++++.+ ++.|||+|.|+|..|..|+..... ..|+|+|+++..+..|+..+ ...+
T Consensus 31 GQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~-~~vvavE~D~~l~~~L~~~~---~~~~ 106 (353)
T 1i4w_A 31 GFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCP-RQYSLLEKRSSLYKFLNAKF---EGSP 106 (353)
T ss_dssp GCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCC-SEEEEECCCHHHHHHHHHHT---TTSS
T ss_pred CcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCC-CEEEEEecCHHHHHHHHHhc---cCCC
Confidence 433344443 233456666654 589999999999999999986432 57999999999999998876 2468
Q ss_pred EEEEecCCCCCc
Q 011002 231 TIVCNYDGNELP 242 (496)
Q Consensus 231 v~v~~~D~~~l~ 242 (496)
+.++++|+..+.
T Consensus 107 l~ii~~D~l~~~ 118 (353)
T 1i4w_A 107 LQILKRDPYDWS 118 (353)
T ss_dssp CEEECSCTTCHH
T ss_pred EEEEECCccchh
Confidence 999999997653
No 308
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.78 E-value=0.0066 Score=62.68 Aligned_cols=129 Identities=11% Similarity=0.079 Sum_probs=73.7
Q ss_pred CCeEeecccCCcHHHHHHHHHc--------------CCCcEEEEEeCCHHHHHHHHHHHHHcC-----------C-ceEE
Q 011002 179 KERVIDMAAAPGGKTTYIAALM--------------KNTGLIYANEMKASRLKSLTANLHRMG-----------V-TNTI 232 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~--------------~~~g~V~AvDis~~rl~~l~~nl~r~g-----------~-~nv~ 232 (496)
..+|+|+|||+|..|+.+...+ .+.-.|+.+|+-..-...+=..+.... . .+-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 5889999999999999874322 134578999987766666655554321 0 0112
Q ss_pred EEecCCCCC-ccccCCCCCCEEEECCCCCCCCcccCCchhh-------cc--------CCHHHHHHH-----HHHHHHHH
Q 011002 233 VCNYDGNEL-PKVLGLNTVDRVLLDAPCSGTGVISKDESVK-------TS--------KSLEDIQKC-----SYLQKQLI 291 (496)
Q Consensus 233 v~~~D~~~l-~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~-------~~--------~s~~~i~~l-----~~lQ~~LL 291 (496)
++.+.+..+ ...++.++||.|+. +...-.+++.|... |+ .++. +... ...-..+|
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~S---s~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~-v~~ay~~Qf~~D~~~fL 208 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHS---AFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEK-TTTAYKRQFQADLAEFL 208 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEE---ESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHH-HHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEe---cceeeeeccCchhhhccccccccCCceEeCCCCHH-HHHHHHHHHHHHHHHHH
Confidence 333333222 23345689999987 33445555555321 11 1222 3222 12222345
Q ss_pred HHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 292 LAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 292 ~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
..-.+.| +|||++|.++..-
T Consensus 209 ~~ra~eL----~pGG~mvl~~~gr 228 (374)
T 3b5i_A 209 RARAAEV----KRGGAMFLVCLGR 228 (374)
T ss_dssp HHHHHHE----EEEEEEEEEEEEC
T ss_pred HHHHHHh----CCCCEEEEEEecC
Confidence 5555555 9999999998754
No 309
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.61 E-value=0.0015 Score=69.71 Aligned_cols=85 Identities=19% Similarity=0.203 Sum_probs=58.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc-------------
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV------------- 244 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~------------- 244 (496)
..-+|+|+|||.||.++-+... +--.|+|+|+++..++..+.|.... .+..+++.|...+...
T Consensus 87 ~~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~~--p~~~~~~~DI~~i~~~~~~~~~~~~~~~~ 162 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYCD--PATHHFNEDIRDITLSHQEGVSDEAAAEH 162 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCCC--TTTCEEESCTHHHHCTTCTTSCHHHHHHH
T ss_pred ccceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhcccC--CCcceeccchhhhhhccccccchhhHHhh
Confidence 3568999999999999877643 2236899999999999988875211 2234566787655310
Q ss_pred --cCCCCCCEEEECCCCCCCCccc
Q 011002 245 --LGLNTVDRVLLDAPCSGTGVIS 266 (496)
Q Consensus 245 --~~~~~FD~VLlDpPCSg~Gvi~ 266 (496)
.....+|+|+.-|||.+..+..
T Consensus 163 i~~~~~~~Dvl~gGpPCQ~FS~AG 186 (482)
T 3me5_A 163 IRQHIPEHDVLLAGFPCQPFSLAG 186 (482)
T ss_dssp HHHHSCCCSEEEEECCCCCC----
T ss_pred hhhcCCCCCEEEecCCCcchhhhC
Confidence 0114699999999998876654
No 310
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.61 E-value=0.011 Score=61.40 Aligned_cols=128 Identities=15% Similarity=0.056 Sum_probs=72.0
Q ss_pred CCeEeecccCCcHHHHHHHHHc----------------CCCcEEEEEeCC-----------HHHHHHHHHHHHHcCC-ce
Q 011002 179 KERVIDMAAAPGGKTTYIAALM----------------KNTGLIYANEMK-----------ASRLKSLTANLHRMGV-TN 230 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~----------------~~~g~V~AvDis-----------~~rl~~l~~nl~r~g~-~n 230 (496)
..+|+|+|||+|..|+.+...+ .+.-.|+.+|+- +...+.+ .+..|- .+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~---~~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNL---EKENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHH---HHHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhh---hhhccCCCC
Confidence 4789999999999999877661 123579999986 2222222 122332 12
Q ss_pred EEEEecCCCCC-ccccCCCCCCEEEECCCCCCCCcccCCchhh-------ccC--------CHHHHH-----HHHHHHHH
Q 011002 231 TIVCNYDGNEL-PKVLGLNTVDRVLLDAPCSGTGVISKDESVK-------TSK--------SLEDIQ-----KCSYLQKQ 289 (496)
Q Consensus 231 v~v~~~D~~~l-~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~-------~~~--------s~~~i~-----~l~~lQ~~ 289 (496)
..++.+.+..| ...++.++||.|+.. +..-.+++.|... |++ ++..+. .....-..
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss---~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSC---YCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEE---SCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEec---ceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 34555655554 444566899999873 2334444444221 111 112221 11222223
Q ss_pred HHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 011002 290 LILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 290 LL~~A~~~L~~~lkpGG~LVYSTCSl~ 316 (496)
+|..-.+.| +|||++|.++..-.
T Consensus 207 FL~~Ra~eL----~pGG~mvl~~~gr~ 229 (384)
T 2efj_A 207 FLRIHSEEL----ISRGRMLLTFICKE 229 (384)
T ss_dssp HHHHHHHHE----EEEEEEEEEEECCC
T ss_pred HHHHHHHHh----ccCCeEEEEEecCC
Confidence 455555655 99999999987653
No 311
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.37 E-value=0.0044 Score=60.30 Aligned_cols=50 Identities=14% Similarity=0.193 Sum_probs=40.3
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV 228 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~ 228 (496)
..+|+.|||.+||+|..+..+..+ + ..++++|+++..++.+++++..+++
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~~-g--r~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKKL-G--RNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCCEEEECCCCCCHHHHHHHHc-C--CeEEEEeCCHHHHHHHHHHHHhccC
Confidence 368999999999999887665544 2 5899999999999999999987764
No 312
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.14 E-value=0.0035 Score=64.39 Aligned_cols=130 Identities=10% Similarity=0.071 Sum_probs=74.5
Q ss_pred CCeEeecccCCcHHHHHHHHH---------------cCCCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCC-
Q 011002 179 KERVIDMAAAPGGKTTYIAAL---------------MKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNEL- 241 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l---------------~~~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l- 241 (496)
.-+|+|+||++|..|+.+... -.+.-.|+.+|+-..-...+-+.+..+.- .+..++.+.+..|
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 467999999999988765443 12345899999988888887777653211 0224444544443
Q ss_pred ccccCCCCCCEEEECCCCCCCCcccCCchh--------hccCC-H-----HHHHHHHHHHHHHHHHHHHhhhhcCCCCcE
Q 011002 242 PKVLGLNTVDRVLLDAPCSGTGVISKDESV--------KTSKS-L-----EDIQKCSYLQKQLILAAIDMVDANSKSGGY 307 (496)
Q Consensus 242 ~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i--------~~~~s-~-----~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~ 307 (496)
...++.++||.|+... ..-.+++-|.. ....+ + .........-..+|..-.+-| +|||+
T Consensus 132 ~rlfp~~S~d~v~Ss~---aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL----~pGG~ 204 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSY---SLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEV----VPGGR 204 (359)
T ss_dssp SCCSCTTCBSCEEEES---CTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHB----CTTCE
T ss_pred hccCCCCceEEEEehh---hhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCce
Confidence 3445668999998632 22222222211 00000 0 111222222233466666665 99999
Q ss_pred EEEEeCCC
Q 011002 308 IVYSTCSI 315 (496)
Q Consensus 308 LVYSTCSl 315 (496)
+|.++..-
T Consensus 205 mvl~~~gr 212 (359)
T 1m6e_X 205 MVLTILGR 212 (359)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecC
Confidence 99987654
No 313
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.02 E-value=0.015 Score=58.90 Aligned_cols=99 Identities=23% Similarity=0.321 Sum_probs=63.7
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecC---CCCC----cccc
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD---GNEL----PKVL 245 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D---~~~l----~~~~ 245 (496)
..+++|++||-.|||+ |..++.+|..++ ...|+++|.++.+++.++ .+|.+.+ +..+ ..++ ....
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLSKAK----EIGADLV--LQISKESPQEIARKVEGQL 239 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCSEE--EECSSCCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HhCCCEE--EcCcccccchHHHHHHHHh
Confidence 4688999999999765 555566666653 238999999999987664 5787643 2322 0111 1111
Q ss_pred CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
. ..||+||- |+|.. ..+..++++| ++||++|...
T Consensus 240 ~-~g~D~vid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~G 273 (356)
T 1pl8_A 240 G-CKPEVTIE---CTGAE-------------------------ASIQAGIYAT----RSGGTLVLVG 273 (356)
T ss_dssp T-SCCSEEEE---CSCCH-------------------------HHHHHHHHHS----CTTCEEEECS
T ss_pred C-CCCCEEEE---CCCCh-------------------------HHHHHHHHHh----cCCCEEEEEe
Confidence 2 46999986 33321 1256677776 9999998643
No 314
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.99 E-value=0.014 Score=58.73 Aligned_cols=91 Identities=12% Similarity=0.074 Sum_probs=63.3
Q ss_pred CCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEE
Q 011002 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~V 253 (496)
.+++|++||-.|||+ |..++.+|..++ ..|+++|.++.+++.++ .+|.+.+. .|...+ . ..||+|
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~v~---~~~~~~----~-~~~D~v 238 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDAL----SMGVKHFY---TDPKQC----K-EELDFI 238 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHH----HTTCSEEE---SSGGGC----C-SCEEEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----hcCCCeec---CCHHHH----h-cCCCEE
Confidence 678999999998765 555566666654 48999999999988664 58887544 332222 1 379999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
|- |+|... .+..++++| ++||+++..
T Consensus 239 id---~~g~~~-------------------------~~~~~~~~l----~~~G~iv~~ 264 (348)
T 3two_A 239 IS---TIPTHY-------------------------DLKDYLKLL----TYNGDLALV 264 (348)
T ss_dssp EE---CCCSCC-------------------------CHHHHHTTE----EEEEEEEEC
T ss_pred EE---CCCcHH-------------------------HHHHHHHHH----hcCCEEEEE
Confidence 85 444321 156677877 999999864
No 315
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.83 E-value=0.0061 Score=60.48 Aligned_cols=103 Identities=14% Similarity=0.072 Sum_probs=56.1
Q ss_pred ceEEEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEE
Q 011002 229 TNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYI 308 (496)
Q Consensus 229 ~nv~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~L 308 (496)
..+.++++|..++...++.++||+|++|||+.........+.... ..............++..+.++| +|||.|
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~--~~~~~~~~l~~l~~~~~~~~rvL----k~~G~l 93 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLG--HIEDYEAFLDELDRVWREVFRLL----VPGGRL 93 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCH--HHHHHHHHHHHHHHHHHHHHHHE----EEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhc--ccccHHHHHHHHHHHHHHHHHHc----CCCcEE
Confidence 357889999887533344578999999999964432221111100 01111112233456777888876 999999
Q ss_pred EEEeCCCCCcC----------CHHHHHHHHHhCCcEEee
Q 011002 309 VYSTCSIMVTE----------NEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 309 VYSTCSl~~eE----------NE~vV~~~L~~~~~~lv~ 337 (496)
++........- ....+..+++..++.+..
T Consensus 94 ~i~~~d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~ 132 (297)
T 2zig_A 94 VIVVGDVAVARRRFGRHLVFPLHADIQVRCRKLGFDNLN 132 (297)
T ss_dssp EEEECCEEEECC----EEEECHHHHHHHHHHHTTCEEEE
T ss_pred EEEECCCccccccCCcccccccHHHHHHHHHHcCCeeec
Confidence 87654221000 012344556667776654
No 316
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.83 E-value=0.022 Score=57.99 Aligned_cols=99 Identities=19% Similarity=0.262 Sum_probs=64.7
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc------cC
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV------LG 246 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~------~~ 246 (496)
..+++|++||-.|+|+ |..++.+|..++ ...|+++|.++.+++.++ .+|.+.+ ++....++... ..
T Consensus 178 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAE----EVGATAT--VDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHH----HHTCSEE--ECTTSSCHHHHHHSTTSSS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HcCCCEE--ECCCCcCHHHHHHhhhhcc
Confidence 4678999999998765 555556666553 248999999999987664 4787643 33222222110 11
Q ss_pred CCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 247 ~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
.+.||+||- |+|.+ ..+..++++| ++||++|..
T Consensus 251 ~gg~Dvvid---~~G~~-------------------------~~~~~~~~~l----~~~G~vv~~ 283 (370)
T 4ej6_A 251 PGGVDVVIE---CAGVA-------------------------ETVKQSTRLA----KAGGTVVIL 283 (370)
T ss_dssp TTCEEEEEE---CSCCH-------------------------HHHHHHHHHE----EEEEEEEEC
T ss_pred CCCCCEEEE---CCCCH-------------------------HHHHHHHHHh----ccCCEEEEE
Confidence 247999985 55543 1366778887 999998864
No 317
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.80 E-value=0.0091 Score=61.31 Aligned_cols=111 Identities=16% Similarity=0.220 Sum_probs=64.6
Q ss_pred CCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCC-Cc----cccCCC
Q 011002 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNE-LP----KVLGLN 248 (496)
Q Consensus 175 ~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~-l~----~~~~~~ 248 (496)
.+++|++||-+|||+ |..++.+|..++ ...|+++|.++.+++.++ .+|.+ ++...... +. ......
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~----~lGa~---~i~~~~~~~~~~~v~~~t~g~ 253 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAK----AQGFE---IADLSLDTPLHEQIAALLGEP 253 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCE---EEETTSSSCHHHHHHHHHSSS
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHH----HcCCc---EEccCCcchHHHHHHHHhCCC
Confidence 578999999999765 556666676654 237999999999988764 47874 23332211 11 111224
Q ss_pred CCCEEEECCCCCCCCcccCCchh-hccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 249 TVDRVLLDAPCSGTGVISKDESV-KTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i-~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
.||+||- |+|........+. ...+. ...+..++++| ++||+++..
T Consensus 254 g~Dvvid---~~G~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l----~~~G~iv~~ 299 (398)
T 1kol_A 254 EVDCAVD---AVGFEARGHGHEGAKHEAP-----------ATVLNSLMQVT----RVAGKIGIP 299 (398)
T ss_dssp CEEEEEE---CCCTTCBCSSTTGGGSBCT-----------THHHHHHHHHE----EEEEEEEEC
T ss_pred CCCEEEE---CCCCcccccccccccccch-----------HHHHHHHHHHH----hcCCEEEEe
Confidence 7999986 4443210000000 00000 11366778887 999998764
No 318
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.80 E-value=0.007 Score=62.29 Aligned_cols=74 Identities=20% Similarity=0.223 Sum_probs=49.7
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCC-cc----ccCC
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL-PK----VLGL 247 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l-~~----~~~~ 247 (496)
..+++|++||-+|||+ |..++.+|..++ ...|+++|.++.+++.++ .+|.. ++..+..++ .. ....
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~---~i~~~~~~~~~~~~~~~~~g 252 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLS----DAGFE---TIDLRNSAPLRDQIDQILGK 252 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----TTTCE---EEETTSSSCHHHHHHHHHSS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCCc---EEcCCCcchHHHHHHHHhCC
Confidence 3578999999999876 667777777764 248999999999987654 57873 333332222 11 1112
Q ss_pred CCCCEEEE
Q 011002 248 NTVDRVLL 255 (496)
Q Consensus 248 ~~FD~VLl 255 (496)
..||+||-
T Consensus 253 ~g~Dvvid 260 (398)
T 2dph_A 253 PEVDCGVD 260 (398)
T ss_dssp SCEEEEEE
T ss_pred CCCCEEEE
Confidence 36999986
No 319
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.79 E-value=0.028 Score=56.22 Aligned_cols=97 Identities=20% Similarity=0.231 Sum_probs=65.7
Q ss_pred CCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--CCCCCC
Q 011002 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--GLNTVD 251 (496)
Q Consensus 175 ~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--~~~~FD 251 (496)
.+++|++||-.|||+ |..++.+|..++ ..|+++|.++++++.+ +.+|.+.+ +..+..++.... ..+.+|
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~----~~lGa~~~--i~~~~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLA----RRLGAEVA--VNARDTDPAAWLQKEIGGAH 234 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHH----HHTTCSEE--EETTTSCHHHHHHHHHSSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHH----HHcCCCEE--EeCCCcCHHHHHHHhCCCCC
Confidence 578999999999876 777777787764 4899999999998865 45787643 333222221111 013799
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
.|+.. +|.+ ..+..++++| ++||+++..
T Consensus 235 ~vid~---~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 262 (340)
T 3s2e_A 235 GVLVT---AVSP-------------------------KAFSQAIGMV----RRGGTIALN 262 (340)
T ss_dssp EEEES---SCCH-------------------------HHHHHHHHHE----EEEEEEEEC
T ss_pred EEEEe---CCCH-------------------------HHHHHHHHHh----ccCCEEEEe
Confidence 99873 3322 2367778887 999999864
No 320
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.66 E-value=0.0059 Score=67.53 Aligned_cols=131 Identities=18% Similarity=0.114 Sum_probs=80.9
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcC---------C--CcEEEEEeC---CHHHHHHHH-----------HHHHHc-----
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMK---------N--TGLIYANEM---KASRLKSLT-----------ANLHRM----- 226 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~---------~--~g~V~AvDi---s~~rl~~l~-----------~nl~r~----- 226 (496)
++.-+|||+|-|+|.-.+.+.+... . .-.++++|. +..-+..+- +.+..+
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 3456899999999999888777531 1 136899999 444444321 112222
Q ss_pred CC-----c----eEEEEecCCCCCccccC---CCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHH
Q 011002 227 GV-----T----NTIVCNYDGNELPKVLG---LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAA 294 (496)
Q Consensus 227 g~-----~----nv~v~~~D~~~l~~~~~---~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A 294 (496)
|+ . .+.++.+|+.+....+. ...||.|++|+-. -.++|++ |+ .+++...
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~-----p~~np~~---w~-----------~~~~~~l 197 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFA-----PAKNPDM---WN-----------EQLFNAM 197 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSC-----C--CCTT---CS-----------HHHHHHH
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCC-----CCCChhh---hh-----------HHHHHHH
Confidence 22 1 35567788865432221 2679999999742 2456765 33 2345555
Q ss_pred HHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEEee
Q 011002 295 IDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 295 ~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~~lv~ 337 (496)
.+++ ++||++...||. ..|...|...++.+..
T Consensus 198 ~~~~----~~g~~~~t~~~~-------~~vr~~l~~aGf~~~~ 229 (689)
T 3pvc_A 198 ARMT----RPGGTFSTFTAA-------GFVRRGLQQAGFNVTK 229 (689)
T ss_dssp HHHE----EEEEEEEESCCC-------HHHHHHHHHTTCEEEE
T ss_pred HHHh----CCCCEEEeccCc-------HHHHHHHHhCCeEEEe
Confidence 5665 999998766665 4677888887776654
No 321
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=95.63 E-value=0.01 Score=61.88 Aligned_cols=46 Identities=13% Similarity=0.077 Sum_probs=36.7
Q ss_pred CeEeecccCCcHHHHHHHHHcCCCcE----EEEEeCCHHHHHHHHHHHHH
Q 011002 180 ERVIDMAAAPGGKTTYIAALMKNTGL----IYANEMKASRLKSLTANLHR 225 (496)
Q Consensus 180 ~~VLDlcAGpGgktl~lA~l~~~~g~----V~AvDis~~rl~~l~~nl~r 225 (496)
-+|||+|||.||.+..+-+.-.+-.. |.|+|+++.+++....|...
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 58999999999999888765211124 89999999999999988753
No 322
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=95.55 E-value=0.015 Score=65.21 Aligned_cols=46 Identities=17% Similarity=0.177 Sum_probs=36.5
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCC----cEEEEEeCCHHHHHHHHHHH
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNT----GLIYANEMKASRLKSLTANL 223 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~----g~V~AvDis~~rl~~l~~nl 223 (496)
...+||||+||.||.++-+.+..... -.++|+|+++.+++..+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 34679999999999999887652110 26899999999999998884
No 323
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.52 E-value=0.1 Score=52.46 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=62.3
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC-CCCcc----ccC-
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG-NELPK----VLG- 246 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~-~~l~~----~~~- 246 (496)
..+++|++||-.|||+ |..++.+|..++ ..|+++|.++.+++.++ .+|.+.+ +..+- .++.. ...
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~~--~~~~~~~~~~~~i~~~~~~ 235 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAK----NCGADVT--LVVDPAKEEESSIIERIRS 235 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTCSEE--EECCTTTSCHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHH----HhCCCEE--EcCcccccHHHHHHHHhcc
Confidence 4678999999999754 444555665553 36999999999988764 5787643 33221 22211 111
Q ss_pred --CCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 247 --LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 247 --~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
...||+||- |+|.. ..+..++++| ++||++|..
T Consensus 236 ~~g~g~D~vid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 270 (352)
T 1e3j_A 236 AIGDLPNVTID---CSGNE-------------------------KCITIGINIT----RTGGTLMLV 270 (352)
T ss_dssp HSSSCCSEEEE---CSCCH-------------------------HHHHHHHHHS----CTTCEEEEC
T ss_pred ccCCCCCEEEE---CCCCH-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 246999986 33321 1256677776 999998864
No 324
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.49 E-value=0.017 Score=58.72 Aligned_cols=99 Identities=18% Similarity=0.222 Sum_probs=64.6
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---cCCCC
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LGLNT 249 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~~~~~ 249 (496)
..+++|++||-.|||+ |..++.+|..++ ...|+++|.++.+++.++ .+|.+.+ +..+..++... ...+.
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~~~~~~gg 258 (371)
T 1f8f_A 186 LKVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAK----QLGATHV--INSKTQDPVAAIKEITDGG 258 (371)
T ss_dssp TCCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----HHTCSEE--EETTTSCHHHHHHHHTTSC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCCEE--ecCCccCHHHHHHHhcCCC
Confidence 3578999999999866 556667777664 237999999999988764 4677543 33322222110 11237
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
||+||- |+|.. ..+..++++| ++||++|..
T Consensus 259 ~D~vid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 288 (371)
T 1f8f_A 259 VNFALE---STGSP-------------------------EILKQGVDAL----GILGKIAVV 288 (371)
T ss_dssp EEEEEE---CSCCH-------------------------HHHHHHHHTE----EEEEEEEEC
T ss_pred CcEEEE---CCCCH-------------------------HHHHHHHHHH----hcCCEEEEe
Confidence 999985 33321 2366778887 999998764
No 325
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.47 E-value=0.028 Score=56.60 Aligned_cols=99 Identities=20% Similarity=0.263 Sum_probs=63.1
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc----ccCCC
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~----~~~~~ 248 (496)
..+++|++||=.|||+ |..++.+|..++ ...|+++|.++.+++.++ .+|.+. ++..+..++.. .....
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~--vi~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIAL----EYGATD--IINYKNGDIVEQILKATDGK 234 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHHH----HHTCCE--EECGGGSCHHHHHHHHTTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHHH----HhCCce--EEcCCCcCHHHHHHHHcCCC
Confidence 4678999999998754 445555555543 237999999999887664 478754 33332222211 11224
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
.||+||- |+|.. ..+..++++| ++||+++..
T Consensus 235 g~D~v~d---~~g~~-------------------------~~~~~~~~~l----~~~G~~v~~ 265 (352)
T 3fpc_A 235 GVDKVVI---AGGDV-------------------------HTFAQAVKMI----KPGSDIGNV 265 (352)
T ss_dssp CEEEEEE---CSSCT-------------------------THHHHHHHHE----EEEEEEEEC
T ss_pred CCCEEEE---CCCCh-------------------------HHHHHHHHHH----hcCCEEEEe
Confidence 7999985 44432 1367778887 999998764
No 326
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.34 E-value=0.03 Score=56.85 Aligned_cols=99 Identities=14% Similarity=0.124 Sum_probs=63.2
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC--CCCccc---cCC
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPKV---LGL 247 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~--~~l~~~---~~~ 247 (496)
..+++|++||-+|||+ |..++.+|..++ ...|+++|.++.+++.++ .+|.+.+ +..+. .++... ...
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAI----ELGATEC--LNPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HTTCSEE--ECGGGCSSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCcEE--EecccccchHHHHHHHHhC
Confidence 3578999999999754 445556666653 237999999999987764 5787643 22221 112110 112
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEE
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYS 311 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpG-G~LVYS 311 (496)
+.||+||- |+|.. ..+..++++| ++| |++|..
T Consensus 260 gg~Dvvid---~~g~~-------------------------~~~~~~~~~l----~~~~G~iv~~ 292 (373)
T 1p0f_A 260 GGVDYAVE---CAGRI-------------------------ETMMNALQST----YCGSGVTVVL 292 (373)
T ss_dssp SCBSEEEE---CSCCH-------------------------HHHHHHHHTB----CTTTCEEEEC
T ss_pred CCCCEEEE---CCCCH-------------------------HHHHHHHHHH----hcCCCEEEEE
Confidence 47999985 44431 2367778887 999 998764
No 327
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.33 E-value=0.023 Score=57.84 Aligned_cols=100 Identities=17% Similarity=0.195 Sum_probs=64.6
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecC--CCCCcc---ccCC
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD--GNELPK---VLGL 247 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D--~~~l~~---~~~~ 247 (496)
..+++|++||=+|||+ |..++.+|..++ ...|+++|.++.+++.+ +.+|.+.+ +... ...+.. ....
T Consensus 189 ~~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a----~~lGa~~v--i~~~~~~~~~~~~i~~~~~ 261 (378)
T 3uko_A 189 AKVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETA----KKFGVNEF--VNPKDHDKPIQEVIVDLTD 261 (378)
T ss_dssp TCCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHH----HTTTCCEE--ECGGGCSSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHH----HHcCCcEE--EccccCchhHHHHHHHhcC
Confidence 4578999999998864 555566666654 24799999999998865 46787643 3222 111111 0112
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEEe
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYST 312 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpG-G~LVYST 312 (496)
+.||+||- |+|.. ..+..++++| ++| |+++...
T Consensus 262 gg~D~vid---~~g~~-------------------------~~~~~~~~~l----~~g~G~iv~~G 295 (378)
T 3uko_A 262 GGVDYSFE---CIGNV-------------------------SVMRAALECC----HKGWGTSVIVG 295 (378)
T ss_dssp SCBSEEEE---CSCCH-------------------------HHHHHHHHTB----CTTTCEEEECS
T ss_pred CCCCEEEE---CCCCH-------------------------HHHHHHHHHh----hccCCEEEEEc
Confidence 47999986 44431 2367788887 996 9987643
No 328
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.32 E-value=0.033 Score=56.81 Aligned_cols=96 Identities=11% Similarity=0.068 Sum_probs=61.7
Q ss_pred CCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEE
Q 011002 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~V 253 (496)
.+++|++||-.|+|+ |..++.+|..++ ..|+++|.++.+++.++ .+|.+.+ +..+..++..... ..||+|
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~~-~g~Dvv 261 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTSEAKREAAK----ALGADEV--VNSRNADEMAAHL-KSFDFI 261 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHH----HHTCSEE--EETTCHHHHHTTT-TCEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCcEE--eccccHHHHHHhh-cCCCEE
Confidence 678999999999865 555566666653 47999999999988765 3787643 2222111111111 479999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 254 LlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
|- |+|... .+..++++| ++||++|..
T Consensus 262 id---~~g~~~-------------------------~~~~~~~~l----~~~G~iv~~ 287 (369)
T 1uuf_A 262 LN---TVAAPH-------------------------NLDDFTTLL----KRDGTMTLV 287 (369)
T ss_dssp EE---CCSSCC-------------------------CHHHHHTTE----EEEEEEEEC
T ss_pred EE---CCCCHH-------------------------HHHHHHHHh----ccCCEEEEe
Confidence 85 444321 145667776 999998754
No 329
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=95.29 E-value=0.044 Score=63.18 Aligned_cols=83 Identities=22% Similarity=0.253 Sum_probs=57.1
Q ss_pred CCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCC-------------cccc
Q 011002 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL-------------PKVL 245 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l-------------~~~~ 245 (496)
.-++|||+||.||.++-+.+. +-.-.|.|+|+++.+++..+.|.. +..++..|...+ ...+
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~p-----~~~~~~~DI~~l~~~~~~~di~~~~~~~l 613 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNNP-----GSTVFTEDCNILLKLVMAGETTNSRGQRL 613 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHCT-----TSEEECSCHHHHHHHHHHTCSBCTTCCBC
T ss_pred CCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhCC-----CCccccccHHHHhhhccchhhhhhhhhhc
Confidence 457999999999999988664 111268899999999999888742 334444443211 0011
Q ss_pred -CCCCCCEEEECCCCCCCCcccC
Q 011002 246 -GLNTVDRVLLDAPCSGTGVISK 267 (496)
Q Consensus 246 -~~~~FD~VLlDpPCSg~Gvi~r 267 (496)
..+.+|+|+.-|||.+.....+
T Consensus 614 p~~~~vDll~GGpPCQ~FS~ag~ 636 (1002)
T 3swr_A 614 PQKGDVEMLCGGPPCQGFSGMNR 636 (1002)
T ss_dssp CCTTTCSEEEECCCCTTCCSSSC
T ss_pred ccCCCeeEEEEcCCCcchhhhCC
Confidence 1257999999999988765543
No 330
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.25 E-value=0.022 Score=57.10 Aligned_cols=97 Identities=14% Similarity=0.127 Sum_probs=65.0
Q ss_pred CCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc----ccCCCC
Q 011002 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLNT 249 (496)
Q Consensus 175 ~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~----~~~~~~ 249 (496)
.+++|++||-.|||+ |..++++|..++ ...|+++|.++++++.++ .+|.+.+ +..+. ++.. ......
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~----~lGa~~~--i~~~~-~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALAR----EVGADAA--VKSGA-GAADAIRELTGGQG 239 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHH----HTTCSEE--EECST-THHHHHHHHHGGGC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCCCEE--EcCCC-cHHHHHHHHhCCCC
Confidence 568899999999865 556666776663 368999999999988764 5787653 22322 2211 111237
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
||+||- |+|.. ..+..++++| ++||+++..
T Consensus 240 ~d~v~d---~~G~~-------------------------~~~~~~~~~l----~~~G~iv~~ 269 (345)
T 3jv7_A 240 ATAVFD---FVGAQ-------------------------STIDTAQQVV----AVDGHISVV 269 (345)
T ss_dssp EEEEEE---SSCCH-------------------------HHHHHHHHHE----EEEEEEEEC
T ss_pred CeEEEE---CCCCH-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 999986 44431 1367778887 999998864
No 331
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.20 E-value=0.058 Score=54.64 Aligned_cols=98 Identities=15% Similarity=0.121 Sum_probs=63.6
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc----ccCCC
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~----~~~~~ 248 (496)
..+++|++||-.|+|+ |..++.+|..++ ..|+++|.++.+++.+ +.+|.+.+. ..+..++.. .....
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~----~~lGa~~vi--~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRA----FALGADHGI--NRLEEDWVERVYALTGDR 256 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHH----HHHTCSEEE--ETTTSCHHHHHHHHHTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHH----HHcCCCEEE--cCCcccHHHHHHHHhCCC
Confidence 3578999999999765 555556666653 4899999999998875 447876432 233222211 11224
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.||+|+- |+|.. .+..++++| ++||++|...
T Consensus 257 g~D~vid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~G 287 (363)
T 3uog_A 257 GADHILE---IAGGA--------------------------GLGQSLKAV----APDGRISVIG 287 (363)
T ss_dssp CEEEEEE---ETTSS--------------------------CHHHHHHHE----EEEEEEEEEC
T ss_pred CceEEEE---CCChH--------------------------HHHHHHHHh----hcCCEEEEEe
Confidence 7999986 44421 156677777 9999988653
No 332
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.15 E-value=0.033 Score=55.95 Aligned_cols=96 Identities=13% Similarity=0.017 Sum_probs=55.8
Q ss_pred eEEEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEE
Q 011002 230 NTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIV 309 (496)
Q Consensus 230 nv~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LV 309 (496)
...++++|.......++.++||+|++|||+...... .+ ..............+|..+.++| +|||.|+
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~------~y--~~~~~~~~~~~l~~~l~~~~rvL----k~~G~i~ 81 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKK------EY--GNLEQHEYVDWFLSFAKVVNKKL----KPDGSFV 81 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSC------SS--CSCHHHHHHHHHHHHHHHHHHHE----EEEEEEE
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCccc------cc--CCcCHHHHHHHHHHHHHHHHHHC----cCCcEEE
Confidence 467889998764333445789999999998543210 01 10122233334456677777776 9999998
Q ss_pred EEeCCCCCcC-------CHHHHHHHHHhCCcEEee
Q 011002 310 YSTCSIMVTE-------NEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 310 YSTCSl~~eE-------NE~vV~~~L~~~~~~lv~ 337 (496)
+.......+. +-..+-.+++..++.+..
T Consensus 82 i~~~d~~~~g~~~~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 82 VDFGGAYMKGVPARSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp EEECCCEETTEEEECCHHHHHHHHHHHTTCCEEEE
T ss_pred EEECCEecCCCcccccchHHHHHHHHHhCCCEEEE
Confidence 7654321111 122333445666777654
No 333
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.07 E-value=0.039 Score=55.92 Aligned_cols=99 Identities=14% Similarity=0.175 Sum_probs=62.4
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC--CCCcc---ccCC
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPK---VLGL 247 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~--~~l~~---~~~~ 247 (496)
..+++|++||-.|+|+ |..++.+|..++ ...|+++|.++.+++.++ .+|.+.+ +.... ..+.. ....
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 186 AKLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAK----EFGATEC--INPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HHTCSEE--ECGGGCSSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCceE--eccccccccHHHHHHHHhC
Confidence 3578999999998754 444555666553 237999999999988764 4687643 22211 11111 0112
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEE
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYS 311 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpG-G~LVYS 311 (496)
+.||+||- |+|.. ..+..++++| ++| |++|..
T Consensus 259 ~g~D~vid---~~g~~-------------------------~~~~~~~~~l----~~~~G~iv~~ 291 (373)
T 2fzw_A 259 GGVDYSFE---CIGNV-------------------------KVMRAALEAC----HKGWGVSVVV 291 (373)
T ss_dssp SCBSEEEE---CSCCH-------------------------HHHHHHHHTB----CTTTCEEEEC
T ss_pred CCCCEEEE---CCCcH-------------------------HHHHHHHHhh----ccCCcEEEEE
Confidence 47999986 44321 1366778887 999 998764
No 334
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.06 E-value=0.044 Score=55.61 Aligned_cols=99 Identities=12% Similarity=0.129 Sum_probs=62.2
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC--CCCccc---cCC
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPKV---LGL 247 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~--~~l~~~---~~~ 247 (496)
..+++|++||-.|||+ |..++.+|..++ ...|+++|.++.+++.++ .+|.+.+ +..+. ..+... ...
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 187 AKVTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFAKAK----EVGATEC--VNPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCSEE--ECGGGCSSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCceE--ecccccchhHHHHHHHHhC
Confidence 3578999999999754 444555665553 237999999999987764 5787643 22221 111110 112
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEE
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYS 311 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpG-G~LVYS 311 (496)
+.||+||- |+|.. ..+..++++| ++| |++|..
T Consensus 260 ~g~D~vid---~~g~~-------------------------~~~~~~~~~l----~~~~G~iv~~ 292 (374)
T 2jhf_A 260 GGVDFSFE---VIGRL-------------------------DTMVTALSCC----QEAYGVSVIV 292 (374)
T ss_dssp SCBSEEEE---CSCCH-------------------------HHHHHHHHHB----CTTTCEEEEC
T ss_pred CCCcEEEE---CCCCH-------------------------HHHHHHHHHh----hcCCcEEEEe
Confidence 47999986 33321 2366777887 999 998764
No 335
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.06 E-value=0.035 Score=56.45 Aligned_cols=100 Identities=20% Similarity=0.208 Sum_probs=62.9
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC--CCCccc---cCC
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPKV---LGL 247 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~--~~l~~~---~~~ 247 (496)
..+++|++||-.|||+ |..++.+|..++ ...|+++|.++.+++.++ .+|.+.+ +..+. .++... ...
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 191 AKVTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKAK----ALGATDC--LNPRELDKPVQDVITELTA 263 (376)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCSEE--ECGGGCSSCHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCcEE--EccccccchHHHHHHHHhC
Confidence 3578999999998754 444555666553 237999999999987654 5787643 22221 111110 111
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEEe
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYST 312 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpG-G~LVYST 312 (496)
+.||+||- |+|.. ..+..++++| ++| |++|...
T Consensus 264 ~g~Dvvid---~~G~~-------------------------~~~~~~~~~l----~~~~G~iv~~G 297 (376)
T 1e3i_A 264 GGVDYSLD---CAGTA-------------------------QTLKAAVDCT----VLGWGSCTVVG 297 (376)
T ss_dssp SCBSEEEE---SSCCH-------------------------HHHHHHHHTB----CTTTCEEEECC
T ss_pred CCccEEEE---CCCCH-------------------------HHHHHHHHHh----hcCCCEEEEEC
Confidence 37999985 44431 1366778887 999 9988643
No 336
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.98 E-value=0.036 Score=56.31 Aligned_cols=94 Identities=15% Similarity=0.169 Sum_probs=60.3
Q ss_pred CCCeEeecc-cCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc---ccCCCCCCE
Q 011002 178 EKERVIDMA-AAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK---VLGLNTVDR 252 (496)
Q Consensus 178 ~g~~VLDlc-AGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~---~~~~~~FD~ 252 (496)
+|++||=.| +|+ |..++.+|..+. ...|+++|.++.+++.++ .+|.+.+ +.... .+.. ......||+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~----~lGad~v--i~~~~-~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVK----SLGAHHV--IDHSK-PLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHH----HTTCSEE--ECTTS-CHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHH----HcCCCEE--EeCCC-CHHHHHHHhcCCCceE
Confidence 789999887 333 555566666543 368999999999988764 4787643 22221 1111 112357998
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
|+- |+|.+ ..+..++++| ++||++|..
T Consensus 243 vid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFS---TTHTD-------------------------KHAAEIADLI----APQGRFCLI 269 (363)
T ss_dssp EEE---CSCHH-------------------------HHHHHHHHHS----CTTCEEEEC
T ss_pred EEE---CCCch-------------------------hhHHHHHHHh----cCCCEEEEE
Confidence 876 44431 2366777877 999999864
No 337
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=94.97 E-value=0.1 Score=50.29 Aligned_cols=84 Identities=14% Similarity=0.123 Sum_probs=61.6
Q ss_pred CCCeEeecccCCc-HHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CC
Q 011002 178 EKERVIDMAAAPG-GKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpG-gktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~ 247 (496)
.|.++|=.|++.+ |.+..+|..+. ....|+.+|.+...++.+.+.+...+-.++.++..|..+..... ..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4788998888654 67777766543 34589999999999999999888887667788889987642210 12
Q ss_pred CCCCEEEECCCCCC
Q 011002 248 NTVDRVLLDAPCSG 261 (496)
Q Consensus 248 ~~FD~VLlDpPCSg 261 (496)
+..|.++.++...+
T Consensus 85 G~iD~lvnnAg~~~ 98 (256)
T 4fs3_A 85 GNIDGVYHSIAFAN 98 (256)
T ss_dssp CCCSEEEECCCCCC
T ss_pred CCCCEEEecccccc
Confidence 68999999876443
No 338
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.96 E-value=0.038 Score=56.11 Aligned_cols=100 Identities=16% Similarity=0.187 Sum_probs=62.8
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC--CCCccc---cCC
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPKV---LGL 247 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~--~~l~~~---~~~ 247 (496)
..+++|++||-.|+|+ |..++.+|..++ ...|+++|.++.+++.++ .+|.+.+ +.... ..+... ...
T Consensus 188 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 188 AKVEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEKAK----VFGATDF--VNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCCEE--ECGGGCSSCHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HhCCceE--EeccccchhHHHHHHHHhC
Confidence 3578999999998754 444555666553 237999999999988764 5787643 22221 112110 111
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEEe
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYST 312 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpG-G~LVYST 312 (496)
+.||+||- |+|.+ ..+..++++| ++| |++|...
T Consensus 261 ~g~D~vid---~~g~~-------------------------~~~~~~~~~l----~~~~G~iv~~G 294 (374)
T 1cdo_A 261 GGVDFSLE---CVGNV-------------------------GVMRNALESC----LKGWGVSVLVG 294 (374)
T ss_dssp SCBSEEEE---CSCCH-------------------------HHHHHHHHTB----CTTTCEEEECS
T ss_pred CCCCEEEE---CCCCH-------------------------HHHHHHHHHh----hcCCcEEEEEc
Confidence 37999986 44321 2366778887 999 9988643
No 339
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.75 E-value=0.14 Score=51.69 Aligned_cols=101 Identities=22% Similarity=0.179 Sum_probs=62.6
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC---CC----cccc
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN---EL----PKVL 245 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~---~l----~~~~ 245 (496)
..+++|++||=.|||+ |..++.+|..++. ..|+++|.++.+++.+++. ...+.....|.. ++ ....
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~l-----~~~~~~~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAAGA-CPLVITDIDEGRLKFAKEI-----CPEVVTHKVERLSAEESAKKIVESF 248 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHTTC-CSEEEEESCHHHHHHHHHH-----CTTCEEEECCSCCHHHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHh-----chhcccccccccchHHHHHHHHHHh
Confidence 4678999999998754 5555566665532 3499999999999887753 222222222211 11 1111
Q ss_pred CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
....||+||- |+|.. ..+..++++| ++||++|...
T Consensus 249 ~g~g~Dvvid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~G 283 (363)
T 3m6i_A 249 GGIEPAVALE---CTGVE-------------------------SSIAAAIWAV----KFGGKVFVIG 283 (363)
T ss_dssp SSCCCSEEEE---CSCCH-------------------------HHHHHHHHHS----CTTCEEEECC
T ss_pred CCCCCCEEEE---CCCCh-------------------------HHHHHHHHHh----cCCCEEEEEc
Confidence 2357999986 44431 1366777876 9999998753
No 340
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.66 E-value=0.14 Score=50.95 Aligned_cols=99 Identities=17% Similarity=0.181 Sum_probs=63.3
Q ss_pred cCCCCCCeEeecccCCcH-HHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc----cCCC
Q 011002 174 LAPQEKERVIDMAAAPGG-KTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV----LGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGg-ktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~----~~~~ 248 (496)
..+++|++||=.|||+.| .++.+|..++ ...|+++|.++++++.+ +.+|...+ ++..-...... ....
T Consensus 156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a----~~lGa~~~--i~~~~~~~~~~~~~~~~~~ 228 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALA----KSFGAMQT--FNSSEMSAPQMQSVLRELR 228 (346)
T ss_dssp TTCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHH----HHTTCSEE--EETTTSCHHHHHHHHGGGC
T ss_pred hccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHH----HHcCCeEE--EeCCCCCHHHHHHhhcccC
Confidence 357899999999987644 3445555554 35789999999998765 45787643 33332222110 1125
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
.+|.|+- |+|.+ ..+..+++++ ++||+++..
T Consensus 229 g~d~v~d---~~G~~-------------------------~~~~~~~~~l----~~~G~~v~~ 259 (346)
T 4a2c_A 229 FNQLILE---TAGVP-------------------------QTVELAVEIA----GPHAQLALV 259 (346)
T ss_dssp SSEEEEE---CSCSH-------------------------HHHHHHHHHC----CTTCEEEEC
T ss_pred Ccccccc---ccccc-------------------------chhhhhhhee----cCCeEEEEE
Confidence 6888875 44432 1366778887 999998764
No 341
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=94.43 E-value=0.32 Score=46.36 Aligned_cols=130 Identities=13% Similarity=0.054 Sum_probs=76.0
Q ss_pred CCCeEeecccCCc-HHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CC
Q 011002 178 EKERVIDMAAAPG-GKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpG-gktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~ 247 (496)
.|.+||=.|++.| |.+..++..+. ....|+.++.+....+.+.+.....+-.++.++..|..+..... ..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 4678888887743 46666666443 33589999998777777777777766556888899988753211 01
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSY----LQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~----lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
+.+|.++.++-....+.. +......+.++...... -...++..++.. ++.+|.||+.+..
T Consensus 86 g~id~li~~Ag~~~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~g~iv~isS~ 149 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEEL---VGEYLNTNRDGFLLAHNISSYSLTAVVKAARPM----MTEGGSIVTLTYL 149 (266)
T ss_dssp SCCCEEEECCCCCCGGGG---SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG----CTTCEEEEEEECG
T ss_pred CCeeEEEEcccccccccc---ccchhhccHHHHHHHHHHhHHHHHHHHHHHHhh----cCCCceEEEEecc
Confidence 478999997754331100 01112233333332221 122344444444 4778988887643
No 342
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=94.37 E-value=0.11 Score=61.54 Aligned_cols=84 Identities=23% Similarity=0.251 Sum_probs=56.7
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCC-------------ccc
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL-------------PKV 244 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l-------------~~~ 244 (496)
..-+||||+||.||.++-+.+. +-.-.|.|+|+++.+++..+.|.. +..+.+.|...+ ...
T Consensus 850 ~~l~viDLFsG~GGlslGfe~A-G~~~vv~avEid~~A~~ty~~N~p-----~~~~~~~DI~~l~~~~~~gdi~~~~~~~ 923 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQA-GISETLWAIEMWDPAAQAFRLNNP-----GTTVFTEDCNVLLKLVMAGEVTNSLGQR 923 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHT-TSEEEEEEECCSHHHHHHHHHHCT-----TSEEECSCHHHHHHHHTTTCSBCSSCCB
T ss_pred CCceEEecccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhCC-----CCcEeeccHHHHhHhhhccchhhhhhhh
Confidence 3467999999999999987653 101258899999999999888742 233444443211 001
Q ss_pred c-CCCCCCEEEECCCCCCCCcccC
Q 011002 245 L-GLNTVDRVLLDAPCSGTGVISK 267 (496)
Q Consensus 245 ~-~~~~FD~VLlDpPCSg~Gvi~r 267 (496)
+ ..+.+|+|+.-|||.+.....+
T Consensus 924 lp~~~~vDvl~GGpPCQ~FS~agr 947 (1330)
T 3av4_A 924 LPQKGDVEMLCGGPPCQGFSGMNR 947 (1330)
T ss_dssp CCCTTTCSEEEECCCCTTTCSSSC
T ss_pred ccccCccceEEecCCCcccccccc
Confidence 1 1247999999999988765543
No 343
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.32 E-value=0.043 Score=55.44 Aligned_cols=73 Identities=14% Similarity=0.084 Sum_probs=47.2
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC-CCccccCCCCCC
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN-ELPKVLGLNTVD 251 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~-~l~~~~~~~~FD 251 (496)
+.+++|++||-.|+|+ |..++.+|..++ ..|+++|.++.+++.+++ +|.+.+ +..+.. ++..... +.||
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~~~----lGa~~v--~~~~~~~~~~~~~~-~~~D 245 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDAMK----MGADHY--IATLEEGDWGEKYF-DTFD 245 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCSEE--EEGGGTSCHHHHSC-SCEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH----cCCCEE--EcCcCchHHHHHhh-cCCC
Confidence 3678999999999854 444555666553 479999999998877653 687643 232211 2211121 4799
Q ss_pred EEEE
Q 011002 252 RVLL 255 (496)
Q Consensus 252 ~VLl 255 (496)
+|+-
T Consensus 246 ~vid 249 (360)
T 1piw_A 246 LIVV 249 (360)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
No 344
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=94.32 E-value=0.061 Score=52.67 Aligned_cols=130 Identities=15% Similarity=0.116 Sum_probs=79.5
Q ss_pred CCCeEeecccCCcHHHHHHHHHc------CCCcEEEEEe-----CCH----------------------HHHHHH---HH
Q 011002 178 EKERVIDMAAAPGGKTTYIAALM------KNTGLIYANE-----MKA----------------------SRLKSL---TA 221 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~------~~~g~V~AvD-----is~----------------------~rl~~l---~~ 221 (496)
|| .|+++|+.-|+.+..++.+. .....|+++| ..+ +.+..+ .+
T Consensus 70 pG-~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 70 PG-VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp CS-EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CC-eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 44 89999999999999887652 2346899999 221 112221 12
Q ss_pred HHHHcCC--ceEEEEecCCCCC-ccc---cCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHH
Q 011002 222 NLHRMGV--TNTIVCNYDGNEL-PKV---LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAI 295 (496)
Q Consensus 222 nl~r~g~--~nv~v~~~D~~~l-~~~---~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~ 295 (496)
+..++|. .+|.++.+++.+. +.. .+...||.|.+|+-. -...+..+..++
T Consensus 149 ~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~------------------------Y~~t~~~le~~~ 204 (257)
T 3tos_A 149 CSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL------------------------YEPTKAVLEAIR 204 (257)
T ss_dssp TTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC------------------------HHHHHHHHHHHG
T ss_pred hhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc------------------------cchHHHHHHHHH
Confidence 2335675 5799999998653 221 123579999999730 011123355555
Q ss_pred HhhhhcCCCCcEEEEEeCCC--CCcCCHHHHHHHHHhCCcEEee
Q 011002 296 DMVDANSKSGGYIVYSTCSI--MVTENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 296 ~~L~~~lkpGG~LVYSTCSl--~~eENE~vV~~~L~~~~~~lv~ 337 (496)
..| +|||+||+-.+.. .+.+. .-|+.|+..+++++..
T Consensus 205 p~l----~~GGvIv~DD~~~~~w~G~~-~A~~ef~~~~~~~i~~ 243 (257)
T 3tos_A 205 PYL----TKGSIVAFDELDNPKWPGEN-IAMRKVLGLDHAPLRL 243 (257)
T ss_dssp GGE----EEEEEEEESSTTCTTCTHHH-HHHHHHTCTTSSCCEE
T ss_pred HHh----CCCcEEEEcCCCCCCChHHH-HHHHHHHhhCCCeEEE
Confidence 555 9999999988642 23333 3446666666554433
No 345
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.27 E-value=0.22 Score=51.12 Aligned_cols=74 Identities=12% Similarity=0.090 Sum_probs=47.1
Q ss_pred CCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc----ccCCCC
Q 011002 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLNT 249 (496)
Q Consensus 175 ~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~----~~~~~~ 249 (496)
.+++|++||=.|||+ |..++.+|..++ ...|+++|.++.+++.++ .+|.+. ++..+..++.. ......
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~--vi~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRRNLAK----ELGADH--VIDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHH----HHTCSE--EECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HcCCCE--EEcCCCCCHHHHHHHHhCCCC
Confidence 478999999998754 444455555543 248999999999988764 568764 33333222211 112247
Q ss_pred CCEEEE
Q 011002 250 VDRVLL 255 (496)
Q Consensus 250 FD~VLl 255 (496)
||+||-
T Consensus 283 ~D~vid 288 (404)
T 3ip1_A 283 AKLFLE 288 (404)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999985
No 346
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.22 E-value=0.075 Score=54.19 Aligned_cols=99 Identities=19% Similarity=0.218 Sum_probs=61.5
Q ss_pred cC-CCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecC---CCCC----ccc
Q 011002 174 LA-PQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD---GNEL----PKV 244 (496)
Q Consensus 174 L~-~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D---~~~l----~~~ 244 (496)
+. +++|++||-.|+|+ |..++.+|..++ ...|+++|.++.+++.++ .+|.+.+ +..+ ..++ ...
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~~~~v~~~ 262 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAE----EIGADLT--LNRRETSVEERRKAIMDI 262 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHH----HTTCSEE--EETTTSCHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHH----HcCCcEE--EeccccCcchHHHHHHHH
Confidence 35 78999999999543 334445555542 138999999999988765 5787643 2322 1111 111
Q ss_pred cCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 245 LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 245 ~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
.....||+||- |+|.+ ..+..++++| ++||++|..
T Consensus 263 ~~g~g~Dvvid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 297 (380)
T 1vj0_A 263 THGRGADFILE---ATGDS-------------------------RALLEGSELL----RRGGFYSVA 297 (380)
T ss_dssp TTTSCEEEEEE---CSSCT-------------------------THHHHHHHHE----EEEEEEEEC
T ss_pred hCCCCCcEEEE---CCCCH-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 11236999986 44432 1256777887 999998753
No 347
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.84 E-value=0.18 Score=50.33 Aligned_cols=100 Identities=16% Similarity=0.097 Sum_probs=63.1
Q ss_pred cCCCCCCeEeecccCCcH-HHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCc----cccCCC
Q 011002 174 LAPQEKERVIDMAAAPGG-KTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGg-ktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~----~~~~~~ 248 (496)
..+++|++||=.|||++| .++.++..+. ...|+++|.++.+++.+ ..+|...+ ++..-.++. ......
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~----~~~Ga~~~--i~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLA----KKIGADVT--INSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHH----HHTTCSEE--EEC-CCCHHHHHHHHTTSS
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhh----hhcCCeEE--EeCCCCCHHHHhhhhcCCC
Confidence 357899999999998754 4444455443 36899999999987654 45777643 222222211 111234
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.+|.++.+. +.+ ..+..++.++ ++||+++...
T Consensus 232 g~d~~~~~~---~~~-------------------------~~~~~~~~~l----~~~G~~v~~g 263 (348)
T 4eez_A 232 GVQSAIVCA---VAR-------------------------IAFEQAVASL----KPMGKMVAVA 263 (348)
T ss_dssp CEEEEEECC---SCH-------------------------HHHHHHHHTE----EEEEEEEECC
T ss_pred CceEEEEec---cCc-------------------------chhheeheee----cCCceEEEEe
Confidence 688888743 222 2366777887 9999987643
No 348
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.83 E-value=0.045 Score=54.16 Aligned_cols=67 Identities=6% Similarity=-0.002 Sum_probs=46.2
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCE
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~ 252 (496)
..+++|++||=.|||+ |..++.+|..++ ..|++++ ++.+++.++ .+|.+.+. + | ... . ...||+
T Consensus 138 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~~~----~lGa~~v~--~-d---~~~-v-~~g~Dv 202 (315)
T 3goh_A 138 IPLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQALAA----KRGVRHLY--R-E---PSQ-V-TQKYFA 202 (315)
T ss_dssp SCCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHHHH----HHTEEEEE--S-S---GGG-C-CSCEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHHHH----HcCCCEEE--c-C---HHH-h-CCCccE
Confidence 3578999999999854 555666666664 4899999 988887764 47875433 3 4 222 2 368999
Q ss_pred EEE
Q 011002 253 VLL 255 (496)
Q Consensus 253 VLl 255 (496)
||-
T Consensus 203 v~d 205 (315)
T 3goh_A 203 IFD 205 (315)
T ss_dssp EEC
T ss_pred EEE
Confidence 874
No 349
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=93.78 E-value=0.46 Score=45.85 Aligned_cols=82 Identities=10% Similarity=0.103 Sum_probs=59.5
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCC-ccc---c-----CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL-PKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l-~~~---~-----~~ 247 (496)
.+.+||=.|++ ||.+.+++..+. .+..|++++.+...++.+...+...+-.++.++..|..+. ... . ..
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 46678866654 778888777553 3458999999999998888888877766788899998875 211 0 01
Q ss_pred CCCCEEEECCCCC
Q 011002 248 NTVDRVLLDAPCS 260 (496)
Q Consensus 248 ~~FD~VLlDpPCS 260 (496)
+.+|.|+.+|-..
T Consensus 90 g~iD~lv~nAg~~ 102 (311)
T 3o26_A 90 GKLDILVNNAGVA 102 (311)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 4799999987543
No 350
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.73 E-value=0.074 Score=53.28 Aligned_cols=99 Identities=12% Similarity=0.006 Sum_probs=61.9
Q ss_pred CCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC-CCC-ccccCCCCCC
Q 011002 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG-NEL-PKVLGLNTVD 251 (496)
Q Consensus 175 ~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~-~~l-~~~~~~~~FD 251 (496)
.+ +|++||-.|+|+ |..++.+|..+.+...|+++|.++.+++.++ .+|.+.+ +..+. .++ ........||
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~~~~~g~g~D 240 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFAL----ELGADYV--SEMKDAESLINKLTDGLGAS 240 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH----HHTCSEE--ECHHHHHHHHHHHHTTCCEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH----HhCCCEE--eccccchHHHHHhhcCCCcc
Confidence 67 999999999864 4555666666511247999999999987764 4687643 22111 011 1111123799
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
+||- |+|.. ..+..++++| ++||++|...
T Consensus 241 ~vid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~g 269 (344)
T 2h6e_A 241 IAID---LVGTE-------------------------ETTYNLGKLL----AQEGAIILVG 269 (344)
T ss_dssp EEEE---SSCCH-------------------------HHHHHHHHHE----EEEEEEEECC
T ss_pred EEEE---CCCCh-------------------------HHHHHHHHHh----hcCCEEEEeC
Confidence 9986 33321 1366777887 9999988643
No 351
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=93.70 E-value=0.043 Score=53.19 Aligned_cols=89 Identities=13% Similarity=0.107 Sum_probs=50.0
Q ss_pred EEEecCCCCCccccCCCCCCEEEECCCCCCCCcccCCchhhccC-CHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEE
Q 011002 232 IVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSK-SLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY 310 (496)
Q Consensus 232 ~v~~~D~~~l~~~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~-s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVY 310 (496)
.++++|+..+...+..++||+|++|||+..... +-+ .. +. .........+|..+.++| +|||.|+.
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~---~~d---~~~~~---~~y~~~~~~~l~~~~~~L----k~~g~i~v 72 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKA---DWD---SFDSH---NEFLAFTYRWIDKVLDKL----DKDGSLYI 72 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSCSS---GGG---CCSSH---HHHHHHHHHHHHHHHHHE----EEEEEEEE
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCCcc---ccc---ccCCH---HHHHHHHHHHHHHHHHHh----cCCeEEEE
Confidence 466788765433344478999999999853210 000 01 22 222233455666677766 99999988
Q ss_pred EeCCCCCcCCHHHHHHHHHhCCcEEee
Q 011002 311 STCSIMVTENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 311 STCSl~~eENE~vV~~~L~~~~~~lv~ 337 (496)
..|.. +. ..+..++...++.+..
T Consensus 73 ~~~d~---~~-~~~~~~~~~~gf~~~~ 95 (260)
T 1g60_A 73 FNTPF---NC-AFICQYLVSKGMIFQN 95 (260)
T ss_dssp EECHH---HH-HHHHHHHHHTTCEEEE
T ss_pred EcCcH---HH-HHHHHHHHhhccceeE
Confidence 76543 11 2222344555665544
No 352
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=93.67 E-value=0.8 Score=44.70 Aligned_cols=145 Identities=12% Similarity=0.048 Sum_probs=75.4
Q ss_pred eEEEecCcchhHHHhcCCCCCCeEeecccCCc-HHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEec
Q 011002 159 FYMLQSASSFLPVMALAPQEKERVIDMAAAPG-GKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY 236 (496)
Q Consensus 159 ~~~iQd~sS~l~v~~L~~~~g~~VLDlcAGpG-gktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~ 236 (496)
.+..|.+.++-..+ ..-.|.+||=.|++.| |.+..++..+. ....|+.++.+....+.+.+.....+ ++.++..
T Consensus 13 ~~~~~gp~~~~~~~--~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~ 88 (293)
T 3grk_A 13 EAQTQGPGSMTAQS--GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG--AFVAGHC 88 (293)
T ss_dssp ----------------CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT--CEEEEEC
T ss_pred CccccCCCCCCccc--ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CceEEEC
Confidence 34455555543322 2235788999998764 57777766543 33589999999776666666666555 4778888
Q ss_pred CCCCCcccc--------CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCC
Q 011002 237 DGNELPKVL--------GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKS 304 (496)
Q Consensus 237 D~~~l~~~~--------~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~----~lQ~~LL~~A~~~L~~~lkp 304 (496)
|..+..... ..+.+|.++.++-....+.+ ..+ ....+.++..... .-...++..++..+ +.
T Consensus 89 Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~-~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m----~~ 161 (293)
T 3grk_A 89 DVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDEL-TGR--YIDTSEANFTNTMLISVYSLTAVSRRAEKLM----AD 161 (293)
T ss_dssp CTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHH-TSC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHT----TT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccc-ccc--ccccCHHHHHHHHHHHHHHHHHHHHHHHHhc----cC
Confidence 987742210 12579999997643220000 001 1122333332222 22233455555554 67
Q ss_pred CcEEEEEeCC
Q 011002 305 GGYIVYSTCS 314 (496)
Q Consensus 305 GG~LVYSTCS 314 (496)
+|.||+.+..
T Consensus 162 ~g~Iv~isS~ 171 (293)
T 3grk_A 162 GGSILTLTYY 171 (293)
T ss_dssp CEEEEEEECG
T ss_pred CCEEEEEeeh
Confidence 8998886643
No 353
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=93.47 E-value=0.36 Score=47.27 Aligned_cols=141 Identities=15% Similarity=0.095 Sum_probs=77.1
Q ss_pred EecCcchhHHHhcCCCCCCeEeecccCC-cHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC
Q 011002 162 LQSASSFLPVMALAPQEKERVIDMAAAP-GGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (496)
Q Consensus 162 iQd~sS~l~v~~L~~~~g~~VLDlcAGp-Ggktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~ 239 (496)
.|.++|+...+.+ .|.+||=.|++. +|.+..++..+. ....|+.+|.+....+.+.......+. +.++..|..
T Consensus 16 ~~gp~sm~~~~~l---~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~Dv~ 90 (296)
T 3k31_A 16 TQGPGSMRTGMLM---EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGV--KLTVPCDVS 90 (296)
T ss_dssp -----CCCCCCTT---TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTC--CEEEECCTT
T ss_pred ccCCccccchhcc---CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCC--eEEEEcCCC
Confidence 4556665433222 477899888864 577777776543 345899999998776666666666653 567788987
Q ss_pred CCcccc--------CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcE
Q 011002 240 ELPKVL--------GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSY----LQKQLILAAIDMVDANSKSGGY 307 (496)
Q Consensus 240 ~l~~~~--------~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~----lQ~~LL~~A~~~L~~~lkpGG~ 307 (496)
+..... ..+.+|.++.++-......+. .+ ....+.++...... -...++..++.. ++.+|.
T Consensus 91 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~-~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----m~~~g~ 163 (296)
T 3k31_A 91 DAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELK-GR--YVDTSLGNFLTSMHISCYSFTYIASKAEPL----MTNGGS 163 (296)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHT-SC--GGGCCHHHHHHHHHHHTHHHHHHHHHHGGG----CTTCEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCccccc-CC--hhhCCHHHHHHHHHHHHHHHHHHHHHHHHH----hhcCCE
Confidence 642210 015799999977433210000 00 11233333332221 223344444444 367899
Q ss_pred EEEEeCC
Q 011002 308 IVYSTCS 314 (496)
Q Consensus 308 LVYSTCS 314 (496)
||+.+..
T Consensus 164 IV~isS~ 170 (296)
T 3k31_A 164 ILTLSYY 170 (296)
T ss_dssp EEEEECG
T ss_pred EEEEEeh
Confidence 8886543
No 354
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=93.39 E-value=0.71 Score=43.23 Aligned_cols=81 Identities=16% Similarity=0.230 Sum_probs=56.8
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~ 248 (496)
.+.+||=.| |+|+.+.+++..+.. ...|++++.++..++.+.+.+...+. ++.++..|..+.... + ..+
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 466788666 568888888875543 34899999999988888877776653 577788898764221 1 013
Q ss_pred CCCEEEECCCCC
Q 011002 249 TVDRVLLDAPCS 260 (496)
Q Consensus 249 ~FD~VLlDpPCS 260 (496)
.+|.|+..+-..
T Consensus 88 ~~d~vi~~Ag~~ 99 (255)
T 1fmc_A 88 KVDILVNNAGGG 99 (255)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 799999876543
No 355
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=93.28 E-value=0.42 Score=45.08 Aligned_cols=80 Identities=13% Similarity=0.111 Sum_probs=56.2
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC--CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN--TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~--~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~ 247 (496)
.+.+||=.| |+|+.+.+++..+.. ...|++++.+...+..+.+.+...+. ++.++..|..+.... + ..
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 456777665 668888888875533 45899999999988888888777653 467788898764221 1 01
Q ss_pred CCCCEEEECCCC
Q 011002 248 NTVDRVLLDAPC 259 (496)
Q Consensus 248 ~~FD~VLlDpPC 259 (496)
+.+|.|+..+-.
T Consensus 81 g~id~li~~Ag~ 92 (276)
T 1wma_A 81 GGLDVLVNNAGI 92 (276)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 379999987643
No 356
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=93.21 E-value=0.34 Score=53.11 Aligned_cols=130 Identities=16% Similarity=0.100 Sum_probs=79.7
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC---------C--CcEEEEEeC---CHHHHHHHH-----------HHHHHc-----C
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK---------N--TGLIYANEM---KASRLKSLT-----------ANLHRM-----G 227 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~---------~--~g~V~AvDi---s~~rl~~l~-----------~nl~r~-----g 227 (496)
+.-+|||+|-|+|.-.+...+... . .-.++++|. +++-+..+- +.+..+ |
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 446899999999998887766531 1 125899998 777666322 222222 1
Q ss_pred C---------ceEEEEecCCCCCccccC---CCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHH
Q 011002 228 V---------TNTIVCNYDGNELPKVLG---LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAI 295 (496)
Q Consensus 228 ~---------~nv~v~~~D~~~l~~~~~---~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~ 295 (496)
+ -.+.+..+|+......+. ...||.|++|+-. -.++|++ |+ .+++....
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~-----p~~np~~---w~-----------~~~~~~l~ 206 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFA-----PAKNPDM---WT-----------QNLFNAMA 206 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSC-----GGGCGGG---SC-----------HHHHHHHH
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCC-----CcCChhh---hh-----------HHHHHHHH
Confidence 1 113456677765322221 2579999999841 2467775 33 23455556
Q ss_pred HhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEEee
Q 011002 296 DMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 296 ~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~~~~~lv~ 337 (496)
+++ +|||++...+|. ..|...|...++.+..
T Consensus 207 ~~~----~~g~~~~t~~~~-------~~vr~~L~~aGf~v~~ 237 (676)
T 3ps9_A 207 RLA----RPGGTLATFTSA-------GFVRRGLQDAGFTMQK 237 (676)
T ss_dssp HHE----EEEEEEEESCCC-------HHHHHHHHHHTCEEEE
T ss_pred HHh----CCCCEEEeccCc-------HHHHHHHHhCCeEEEe
Confidence 665 999987654444 4677777776766544
No 357
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.21 E-value=0.25 Score=49.28 Aligned_cols=97 Identities=15% Similarity=0.155 Sum_probs=61.4
Q ss_pred CCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccC--CCCCC
Q 011002 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLG--LNTVD 251 (496)
Q Consensus 175 ~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~--~~~FD 251 (496)
.+++|++||-.|+|+ |..++.++..++ ..|+++|.++.+++.++ .+|...+ +.....++..... ...||
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~~--~d~~~~~~~~~~~~~~~~~d 232 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKLELAK----ELGADLV--VNPLKEDAAKFMKEKVGGVH 232 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHH----HTTCSEE--ECTTTSCHHHHHHHHHSSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH----HCCCCEE--ecCCCccHHHHHHHHhCCCC
Confidence 678999999999854 445555565543 48999999999988764 4787532 2222112111000 04699
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
+|+- |+|.. ..+..++++| ++||+++..
T Consensus 233 ~vid---~~g~~-------------------------~~~~~~~~~l----~~~G~~v~~ 260 (339)
T 1rjw_A 233 AAVV---TAVSK-------------------------PAFQSAYNSI----RRGGACVLV 260 (339)
T ss_dssp EEEE---SSCCH-------------------------HHHHHHHHHE----EEEEEEEEC
T ss_pred EEEE---CCCCH-------------------------HHHHHHHHHh----hcCCEEEEe
Confidence 9986 33321 1356677777 999998764
No 358
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=93.14 E-value=0.56 Score=45.99 Aligned_cols=81 Identities=16% Similarity=0.151 Sum_probs=58.6
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.|.+||=.|++ ||.+.+++..+. ....|+.++.+...++.+.+.+...|. ++.++..|..+..... ..+
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 57788877765 677777776553 335899999999999999888887764 4778888988743210 014
Q ss_pred CCCEEEECCCCC
Q 011002 249 TVDRVLLDAPCS 260 (496)
Q Consensus 249 ~FD~VLlDpPCS 260 (496)
.+|.|+.++-..
T Consensus 108 ~id~lvnnAg~~ 119 (301)
T 3tjr_A 108 GVDVVFSNAGIV 119 (301)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 799999977543
No 359
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.12 E-value=0.065 Score=53.82 Aligned_cols=92 Identities=22% Similarity=0.205 Sum_probs=57.2
Q ss_pred CCCeEeecc-cCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc---ccCCCCCCE
Q 011002 178 EKERVIDMA-AAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK---VLGLNTVDR 252 (496)
Q Consensus 178 ~g~~VLDlc-AGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~---~~~~~~FD~ 252 (496)
+|++||=.| +|+ |..++.+|..++ ..|+++|.++.+++.+++ +|.+.+ +..+. .+.. ......||+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~v--i~~~~-~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRNETIEWTKK----MGADIV--LNHKE-SLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEECCSHHHHHHHHH----HTCSEE--ECTTS-CHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCcEE--EECCc-cHHHHHHHhCCCCccE
Confidence 899999773 332 444555555543 489999999999887764 677643 22221 1111 012357999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEE
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY 310 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVY 310 (496)
|+- |+|.. ..+..++++| ++||++|.
T Consensus 221 v~d---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~ 246 (346)
T 3fbg_A 221 VFC---TFNTD-------------------------MYYDDMIQLV----KPRGHIAT 246 (346)
T ss_dssp EEE---SSCHH-------------------------HHHHHHHHHE----EEEEEEEE
T ss_pred EEE---CCCch-------------------------HHHHHHHHHh----ccCCEEEE
Confidence 876 44321 2356777877 99999974
No 360
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.06 E-value=0.23 Score=49.52 Aligned_cols=74 Identities=12% Similarity=0.079 Sum_probs=49.2
Q ss_pred cCCCCCCeEeecccC--CcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc----ccCC
Q 011002 174 LAPQEKERVIDMAAA--PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGL 247 (496)
Q Consensus 174 L~~~~g~~VLDlcAG--pGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~----~~~~ 247 (496)
..+++|++||-.||| .|..++.++..++ ..|+++|.++.+++.+++ +|.+.+ +......+.. ....
T Consensus 140 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lga~~~--~~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 140 LNLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNKHTEELLR----LGAAYV--IDTSTAPLYETVMELTNG 211 (340)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCSEE--EETTTSCHHHHHHHHTTT
T ss_pred cccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----CCCcEE--EeCCcccHHHHHHHHhCC
Confidence 467899999999886 4666667777664 489999999998877754 677543 2332222211 1122
Q ss_pred CCCCEEEE
Q 011002 248 NTVDRVLL 255 (496)
Q Consensus 248 ~~FD~VLl 255 (496)
..||+|+-
T Consensus 212 ~g~Dvvid 219 (340)
T 3gms_A 212 IGADAAID 219 (340)
T ss_dssp SCEEEEEE
T ss_pred CCCcEEEE
Confidence 47999986
No 361
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.05 E-value=0.094 Score=52.60 Aligned_cols=96 Identities=19% Similarity=0.134 Sum_probs=61.4
Q ss_pred cCCCCCCeEeeccc--CCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc----ccCC
Q 011002 174 LAPQEKERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGL 247 (496)
Q Consensus 174 L~~~~g~~VLDlcA--GpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~----~~~~ 247 (496)
..+++|++||-.|| |.|..++.++..++ ..|++++.++.+++.+++ +|.+.+ +..+ ..+.. ....
T Consensus 155 ~~~~~g~~VlV~Gasg~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----~ga~~v--~~~~-~~~~~~v~~~~~~ 225 (342)
T 4eye_A 155 GQLRAGETVLVLGAAGGIGTAAIQIAKGMG--AKVIAVVNRTAATEFVKS----VGADIV--LPLE-EGWAKAVREATGG 225 (342)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHH----HTCSEE--EESS-TTHHHHHHHHTTT
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCcEE--ecCc-hhHHHHHHHHhCC
Confidence 35788999998887 33555566666653 489999999998876654 677543 3333 22211 1122
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
..||+|+- |+|.. .+..++++| ++||++|..
T Consensus 226 ~g~Dvvid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~ 256 (342)
T 4eye_A 226 AGVDMVVD---PIGGP--------------------------AFDDAVRTL----ASEGRLLVV 256 (342)
T ss_dssp SCEEEEEE---SCC----------------------------CHHHHHHTE----EEEEEEEEC
T ss_pred CCceEEEE---CCchh--------------------------HHHHHHHhh----cCCCEEEEE
Confidence 37999986 44421 145677776 999998864
No 362
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.92 E-value=0.4 Score=47.83 Aligned_cols=96 Identities=24% Similarity=0.349 Sum_probs=61.8
Q ss_pred CCCCCCeEeeccc--CCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc----ccCCC
Q 011002 175 APQEKERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLN 248 (496)
Q Consensus 175 ~~~~g~~VLDlcA--GpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~----~~~~~ 248 (496)
.+++|++||-.|+ |.|..++.++..++ ..|+++|.++.+++.++ .+|...+ +..+..++.. .....
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~----~~ga~~~--~d~~~~~~~~~~~~~~~~~ 234 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFG--ARVIATAGSEDKLRRAK----ALGADET--VNYTHPDWPKEVRRLTGGK 234 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HHTCSEE--EETTSTTHHHHHHHHTTTT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----hcCCCEE--EcCCcccHHHHHHHHhCCC
Confidence 5788999999998 44556666666553 48999999999988775 3576543 2322122111 11124
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
.+|+|+- |+| +- .+..++++| ++||++|..
T Consensus 235 ~~d~vi~---~~g-~~-------------------------~~~~~~~~l----~~~G~~v~~ 264 (343)
T 2eih_A 235 GADKVVD---HTG-AL-------------------------YFEGVIKAT----ANGGRIAIA 264 (343)
T ss_dssp CEEEEEE---SSC-SS-------------------------SHHHHHHHE----EEEEEEEES
T ss_pred CceEEEE---CCC-HH-------------------------HHHHHHHhh----ccCCEEEEE
Confidence 7999986 334 21 145667776 999988764
No 363
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=92.74 E-value=1.3 Score=41.57 Aligned_cols=80 Identities=8% Similarity=0.089 Sum_probs=57.4
Q ss_pred CCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCCC
Q 011002 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLNT 249 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~~ 249 (496)
+.+||=.|+ +||.+.+++..+.. ...|++++.++..++.+...+...|. ++.++..|..+..... ..+.
T Consensus 5 ~k~vlITGa-s~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 5 EKVALVTGA-SRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 567776664 57778777765533 34899999999999999888887764 4778888987642210 1257
Q ss_pred CCEEEECCCCC
Q 011002 250 VDRVLLDAPCS 260 (496)
Q Consensus 250 FD~VLlDpPCS 260 (496)
+|.|+.++-..
T Consensus 83 id~li~~Ag~~ 93 (247)
T 3lyl_A 83 IDILVNNAGIT 93 (247)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999977543
No 364
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.58 E-value=0.32 Score=48.21 Aligned_cols=97 Identities=16% Similarity=0.163 Sum_probs=61.4
Q ss_pred CCCCCCeEeeccc--CCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc----ccCCC
Q 011002 175 APQEKERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLN 248 (496)
Q Consensus 175 ~~~~g~~VLDlcA--GpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~----~~~~~ 248 (496)
.+++|++||-.|+ |.|..++.++..++ ..|++++.++.+++.++ .+|...+ +..+...+.. .....
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~Ga~~~--~~~~~~~~~~~~~~~~~~~ 208 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSPEKAAHAK----ALGAWET--IDYSHEDVAKRVLELTDGK 208 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHH----HHTCSEE--EETTTSCHHHHHHHHTTTC
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCCEE--EeCCCccHHHHHHHHhCCC
Confidence 5789999998873 23555555666553 48999999999988765 4676532 3332222211 11224
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.+|+|+- |+|.. .+..++++| ++||++|...
T Consensus 209 g~Dvvid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~g 239 (325)
T 3jyn_A 209 KCPVVYD---GVGQD--------------------------TWLTSLDSV----APRGLVVSFG 239 (325)
T ss_dssp CEEEEEE---SSCGG--------------------------GHHHHHTTE----EEEEEEEECC
T ss_pred CceEEEE---CCChH--------------------------HHHHHHHHh----cCCCEEEEEe
Confidence 7999886 43321 256677776 9999988643
No 365
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=92.57 E-value=1.2 Score=42.00 Aligned_cols=80 Identities=16% Similarity=0.189 Sum_probs=56.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~ 248 (496)
.|.+||=.|+ +||.+..++..+.. ...|++++.++..++.+.+.+...|. ++.++..|..+.... + ..+
T Consensus 6 ~~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 6 QGKVALITGA-SSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3567777775 57788877775533 34899999999999888887776654 577788898764221 0 014
Q ss_pred CCCEEEECCCC
Q 011002 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~FD~VLlDpPC 259 (496)
.+|.++.++-.
T Consensus 84 ~id~lv~nAg~ 94 (247)
T 2jah_A 84 GLDILVNNAGI 94 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999997743
No 366
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.55 E-value=1.3 Score=42.14 Aligned_cols=82 Identities=17% Similarity=0.119 Sum_probs=58.1
Q ss_pred CCCeEeecccC-CcHHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CC
Q 011002 178 EKERVIDMAAA-PGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDlcAG-pGgktl~lA~l~-~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~ 247 (496)
.|.+||=.|++ . |.+.+++..+ .....|+.+|.+...++.+...+...+-.++.++..|..+..... ..
T Consensus 21 ~~k~vlITGasg~-GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 21 KGKVVLVTAAAGT-GIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTCEEEESSCSSS-SHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCC-chHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 46788888773 3 4566665543 334589999999999999888887776667889999988743211 01
Q ss_pred CCCCEEEECCCCC
Q 011002 248 NTVDRVLLDAPCS 260 (496)
Q Consensus 248 ~~FD~VLlDpPCS 260 (496)
+.+|.|+.++-..
T Consensus 100 g~id~li~~Ag~~ 112 (266)
T 3o38_A 100 GRLDVLVNNAGLG 112 (266)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCcEEEECCCcC
Confidence 4789999977543
No 367
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.40 E-value=0.12 Score=52.04 Aligned_cols=96 Identities=9% Similarity=0.153 Sum_probs=60.9
Q ss_pred CCCCC------CeEeecccCCcHHHHHH-HHHc-CCCc--EEEEEeCCHH---HHHHHHHHHHHcCCceEEEEecCCCCC
Q 011002 175 APQEK------ERVIDMAAAPGGKTTYI-AALM-KNTG--LIYANEMKAS---RLKSLTANLHRMGVTNTIVCNYDGNEL 241 (496)
Q Consensus 175 ~~~~g------~~VLDlcAGpGgktl~l-A~l~-~~~g--~V~AvDis~~---rl~~l~~nl~r~g~~nv~v~~~D~~~l 241 (496)
.+++| ++||-.|+ |+.++.+ .++. +..| .|+++|.+++ +++.++ .+|.+.+ ..+..++
T Consensus 163 ~~~~g~~~~~~~~VlV~Ga--G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~----~lGa~~v---~~~~~~~ 233 (357)
T 2b5w_A 163 YASRSAFDWDPSSAFVLGN--GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE----ELDATYV---DSRQTPV 233 (357)
T ss_dssp HHTTTTSCCCCCEEEEECC--SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH----HTTCEEE---ETTTSCG
T ss_pred CCCCCcccCCCCEEEEECC--CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH----HcCCccc---CCCccCH
Confidence 46789 99999997 5666655 5555 4333 4999999988 877654 5787544 3322222
Q ss_pred cc--ccCCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 242 PK--VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 242 ~~--~~~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.. .. .+.||+||- |+|.. ..+..++++| ++||++|...
T Consensus 234 ~~i~~~-~gg~Dvvid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~g 273 (357)
T 2b5w_A 234 EDVPDV-YEQMDFIYE---ATGFP-------------------------KHAIQSVQAL----APNGVGALLG 273 (357)
T ss_dssp GGHHHH-SCCEEEEEE---CSCCH-------------------------HHHHHHHHHE----EEEEEEEECC
T ss_pred HHHHHh-CCCCCEEEE---CCCCh-------------------------HHHHHHHHHH----hcCCEEEEEe
Confidence 21 11 137999975 44321 1356777887 9999987643
No 368
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=92.36 E-value=0.23 Score=45.22 Aligned_cols=98 Identities=20% Similarity=0.248 Sum_probs=57.2
Q ss_pred cCCCCCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCc----cccCCC
Q 011002 174 LAPQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~----~~~~~~ 248 (496)
..+++|++||..|++ |+.+..+++++.. ...|+++|.++.+++.++ .+|...+ +..+-..+. ......
T Consensus 34 ~~~~~g~~vlV~Ga~-ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~g~~~~--~d~~~~~~~~~~~~~~~~~ 106 (198)
T 1pqw_A 34 GRLSPGERVLIHSAT-GGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RLGVEYV--GDSRSVDFADEILELTDGY 106 (198)
T ss_dssp SCCCTTCEEEETTTT-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TTCCSEE--EETTCSTHHHHHHHHTTTC
T ss_pred hCCCCCCEEEEeeCC-ChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCCEE--eeCCcHHHHHHHHHHhCCC
Confidence 467899999999853 3344433333221 258999999998876653 3576432 222211111 111124
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
.+|+|+..+ |. ..+..+++++ ++||++|..
T Consensus 107 ~~D~vi~~~---g~--------------------------~~~~~~~~~l----~~~G~~v~~ 136 (198)
T 1pqw_A 107 GVDVVLNSL---AG--------------------------EAIQRGVQIL----APGGRFIEL 136 (198)
T ss_dssp CEEEEEECC---CT--------------------------HHHHHHHHTE----EEEEEEEEC
T ss_pred CCeEEEECC---ch--------------------------HHHHHHHHHh----ccCCEEEEE
Confidence 699998632 21 0255667776 999998864
No 369
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.34 E-value=0.37 Score=47.83 Aligned_cols=96 Identities=16% Similarity=0.117 Sum_probs=59.9
Q ss_pred CCCCCCeEeeccc--CCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc----ccCCC
Q 011002 175 APQEKERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLN 248 (496)
Q Consensus 175 ~~~~g~~VLDlcA--GpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~----~~~~~ 248 (496)
.+++|++||-.|+ |.|..++.++..++ ..|+++|.++.+++.++ .+|...+ +..+..++.. .....
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~ga~~~--~~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKG--AHTIAVASTDEKLKIAK----EYGAEYL--INASKEDILRQVLKFTNGK 216 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HTTCSEE--EETTTSCHHHHHHHHTTTS
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCcEE--EeCCCchHHHHHHHHhCCC
Confidence 5789999999984 23444445555543 48999999999988654 4676532 3332222211 11234
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
.||+|+- |+|.. .+..++++| ++||++|..
T Consensus 217 g~D~vid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~ 246 (334)
T 3qwb_A 217 GVDASFD---SVGKD--------------------------TFEISLAAL----KRKGVFVSF 246 (334)
T ss_dssp CEEEEEE---CCGGG--------------------------GHHHHHHHE----EEEEEEEEC
T ss_pred CceEEEE---CCChH--------------------------HHHHHHHHh----ccCCEEEEE
Confidence 7999986 33321 256677777 999998864
No 370
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=92.29 E-value=0.77 Score=43.49 Aligned_cols=123 Identities=15% Similarity=0.113 Sum_probs=73.9
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeC-CHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDi-s~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~ 247 (496)
.+.+||=.| |+|+.+.+++..+.. ...|++++. ++..++.+...+...|. ++.++..|..+.... + ..
T Consensus 20 ~~k~vlItG-asggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTG-AGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 467788666 468888888876543 348999998 88888887777776664 477788898764321 1 01
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~----~lQ~~LL~~A~~~L~~~lkpGG~LVYSTC 313 (496)
+.+|.|+.++.....+.+ ...+.++..... .-...++..++..+ +.||.||+.+.
T Consensus 98 ~~~d~vi~~Ag~~~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~iv~~sS 156 (274)
T 1ja9_A 98 GGLDFVMSNSGMEVWCDE-------LEVTQELFDKVFNLNTRGQFFVAQQGLKHC----RRGGRIILTSS 156 (274)
T ss_dssp SCEEEEECCCCCCCCCCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHE----EEEEEEEEECC
T ss_pred CCCCEEEECCCCCCCccc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHH----hhCCEEEEEcC
Confidence 378999986654332211 122333322211 22234555555554 45688887653
No 371
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=92.29 E-value=1.1 Score=43.41 Aligned_cols=80 Identities=11% Similarity=0.042 Sum_probs=56.4
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.|.+||=.|++ ||.+.+++..+. ....|+.+|.+...++.+.+.+...+-..+.++..|..+..... ..+
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 32 EGRIALVTGGG-TGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp --CEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46778877754 778888877553 33589999999999998888887665555678889987743210 115
Q ss_pred CCCEEEECCC
Q 011002 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~FD~VLlDpP 258 (496)
.+|.++.++-
T Consensus 111 ~iD~lvnnAG 120 (281)
T 4dry_A 111 RLDLLVNNAG 120 (281)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899999774
No 372
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.26 E-value=0.24 Score=48.98 Aligned_cols=97 Identities=16% Similarity=0.114 Sum_probs=58.5
Q ss_pred CCCCCC-eEeeccc--CCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC-CCCccccCCCCC
Q 011002 175 APQEKE-RVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG-NELPKVLGLNTV 250 (496)
Q Consensus 175 ~~~~g~-~VLDlcA--GpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~-~~l~~~~~~~~F 250 (496)
.+++|+ +||-.|| |.|..++.+|..++ ..|++++.++.+++.++ .+|.+.+.-. .+. ...........|
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~----~lGa~~~i~~-~~~~~~~~~~~~~~~~ 217 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAAEHDYLR----VLGAKEVLAR-EDVMAERIRPLDKQRW 217 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTTCHHHHH----HTTCSEEEEC-C---------CCSCCE
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH----HcCCcEEEec-CCcHHHHHHHhcCCcc
Confidence 577886 8999987 33555566666654 47999999988887764 4787643211 111 111111122469
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 251 D~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
|+|+- |+|.. .+..+++++ ++||+++..
T Consensus 218 d~vid---~~g~~--------------------------~~~~~~~~l----~~~G~~v~~ 245 (328)
T 1xa0_A 218 AAAVD---PVGGR--------------------------TLATVLSRM----RYGGAVAVS 245 (328)
T ss_dssp EEEEE---CSTTT--------------------------THHHHHHTE----EEEEEEEEC
T ss_pred cEEEE---CCcHH--------------------------HHHHHHHhh----ccCCEEEEE
Confidence 98875 33321 156677777 999998763
No 373
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=92.26 E-value=0.8 Score=45.35 Aligned_cols=81 Identities=10% Similarity=0.060 Sum_probs=58.7
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCCcccc--------CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~-nv~v~~~D~~~l~~~~--------~~ 247 (496)
.|.+||=.|++ ||.+.+++..+. .+..|++++.+...++.+...+...+.. ++.++..|..+..... ..
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 46678877765 777888777553 3358999999999999998888877653 5888889987743210 12
Q ss_pred CCCCEEEECCCC
Q 011002 248 NTVDRVLLDAPC 259 (496)
Q Consensus 248 ~~FD~VLlDpPC 259 (496)
+.+|.|+.++--
T Consensus 86 g~id~lv~nAg~ 97 (319)
T 3ioy_A 86 GPVSILCNNAGV 97 (319)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 578999997743
No 374
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.25 E-value=0.079 Score=53.39 Aligned_cols=97 Identities=18% Similarity=0.239 Sum_probs=59.9
Q ss_pred CCCCCCeEeeccc-C-CcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc---CCCC
Q 011002 175 APQEKERVIDMAA-A-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---GLNT 249 (496)
Q Consensus 175 ~~~~g~~VLDlcA-G-pGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~---~~~~ 249 (496)
.+++|++||-.|+ | .|..++.++..++ ..|+++|.++.+++.+++ +|...+ +..+..++.... ....
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~~--~~~~~~~~~~~~~~~~~~g 235 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAFG--AEVYATAGSTGKCEACER----LGAKRG--INYRSEDFAAVIKAETGQG 235 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----HTCSEE--EETTTSCHHHHHHHHHSSC
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCCEE--EeCCchHHHHHHHHHhCCC
Confidence 5789999998743 2 3444555555543 489999999999887754 676543 333222221110 1257
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
||+|+- |+|.. .+..++++| ++||+++...
T Consensus 236 ~Dvvid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~g 265 (353)
T 4dup_A 236 VDIILD---MIGAA--------------------------YFERNIASL----AKDGCLSIIA 265 (353)
T ss_dssp EEEEEE---SCCGG--------------------------GHHHHHHTE----EEEEEEEECC
T ss_pred ceEEEE---CCCHH--------------------------HHHHHHHHh----ccCCEEEEEE
Confidence 999986 44321 145667776 9999987643
No 375
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.14 E-value=0.17 Score=51.15 Aligned_cols=98 Identities=18% Similarity=0.182 Sum_probs=62.4
Q ss_pred cCCCCCCeEeeccc--CCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---cCCC
Q 011002 174 LAPQEKERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDlcA--GpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~~~~ 248 (496)
..+++|++||-.|+ |.|..++.++..++ ..|++++.++.+++.+++ +|...+ +..+...+... ....
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~----~Ga~~~--~~~~~~~~~~~~~~~~~~ 230 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKAK--CHVIGTCSSDEKSAFLKS----LGCDRP--INYKTEPVGTVLKQEYPE 230 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----TTCSEE--EETTTSCHHHHHHHHCTT
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHH----cCCcEE--EecCChhHHHHHHHhcCC
Confidence 36789999999983 34555666666653 489999999998877653 787643 33322222111 1124
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.+|+|+- |+|. ..+..++++| ++||++|...
T Consensus 231 g~D~vid---~~g~--------------------------~~~~~~~~~l----~~~G~iv~~g 261 (362)
T 2c0c_A 231 GVDVVYE---SVGG--------------------------AMFDLAVDAL----ATKGRLIVIG 261 (362)
T ss_dssp CEEEEEE---CSCT--------------------------HHHHHHHHHE----EEEEEEEECC
T ss_pred CCCEEEE---CCCH--------------------------HHHHHHHHHH----hcCCEEEEEe
Confidence 6999986 3331 1256677777 9999987643
No 376
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.09 E-value=0.12 Score=51.37 Aligned_cols=98 Identities=18% Similarity=0.193 Sum_probs=60.8
Q ss_pred cCCCCCCeEeecccC--CcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---cCCC
Q 011002 174 LAPQEKERVIDMAAA--PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDlcAG--pGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~~~~ 248 (496)
..+++|++||-.||+ .|..++.++..++ ..|+++|.++.+++.+. +.+|...+ +.....++... ...+
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~---~~~g~~~~--~~~~~~~~~~~~~~~~~~ 217 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLKG--CRVVGIAGGAEKCRFLV---EELGFDGA--IDYKNEDLAAGLKRECPK 217 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH---HTTCCSEE--EETTTSCHHHHHHHHCTT
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH---HHcCCCEE--EECCCHHHHHHHHHhcCC
Confidence 367899999998873 3445555555543 48999999999887663 34676532 22222222110 1124
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
.||+|+- |+|. ..+..++++| ++||++|..
T Consensus 218 ~~d~vi~---~~g~--------------------------~~~~~~~~~l----~~~G~iv~~ 247 (336)
T 4b7c_A 218 GIDVFFD---NVGG--------------------------EILDTVLTRI----AFKARIVLC 247 (336)
T ss_dssp CEEEEEE---SSCH--------------------------HHHHHHHTTE----EEEEEEEEC
T ss_pred CceEEEE---CCCc--------------------------chHHHHHHHH----hhCCEEEEE
Confidence 7999876 3331 1366777777 999998864
No 377
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=92.09 E-value=1.5 Score=41.05 Aligned_cols=81 Identities=10% Similarity=0.123 Sum_probs=56.9
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC--CCCccc---c-----C
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPKV---L-----G 246 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~--~~l~~~---~-----~ 246 (496)
.|.+||=.|+ +||.+.+++..+. ....|+.++.+...++.+...+...+..++.++..|. .+.... . .
T Consensus 13 ~~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 13 KGRVILVTGA-ARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 4677887765 5778887777553 3348999999999999999999888766666666665 432110 0 0
Q ss_pred CCCCCEEEECCCC
Q 011002 247 LNTVDRVLLDAPC 259 (496)
Q Consensus 247 ~~~FD~VLlDpPC 259 (496)
.+.+|.++.++-.
T Consensus 92 ~g~id~lv~nAg~ 104 (247)
T 3i1j_A 92 FGRLDGLLHNASI 104 (247)
T ss_dssp HSCCSEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 1479999998754
No 378
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=92.08 E-value=0.38 Score=48.37 Aligned_cols=98 Identities=17% Similarity=0.201 Sum_probs=57.8
Q ss_pred CCCCCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCc----cccCCCC
Q 011002 175 APQEKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLNT 249 (496)
Q Consensus 175 ~~~~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~----~~~~~~~ 249 (496)
.+++|++||-.|++ |+.+..+++++. ....|+++|.++.+++.++ .+|... ++..+..++. .......
T Consensus 159 ~~~~g~~vlV~Ga~-ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~~~~~~ 231 (354)
T 2j8z_A 159 NVQAGDYVLIHAGL-SGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE----KLGAAA--GFNYKKEDFSEATLKFTKGAG 231 (354)
T ss_dssp CCCTTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HHTCSE--EEETTTSCHHHHHHHHTTTSC
T ss_pred CCCCCCEEEEECCc-cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCcE--EEecCChHHHHHHHHHhcCCC
Confidence 57889999988742 344443333322 1248999999999987763 457653 2333222211 1111246
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
+|+|+- |+|.. .+..++++| ++||++|...
T Consensus 232 ~d~vi~---~~G~~--------------------------~~~~~~~~l----~~~G~iv~~G 261 (354)
T 2j8z_A 232 VNLILD---CIGGS--------------------------YWEKNVNCL----ALDGRWVLYG 261 (354)
T ss_dssp EEEEEE---SSCGG--------------------------GHHHHHHHE----EEEEEEEECC
T ss_pred ceEEEE---CCCch--------------------------HHHHHHHhc----cCCCEEEEEe
Confidence 999986 33321 145567776 9999988643
No 379
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.05 E-value=0.19 Score=50.03 Aligned_cols=98 Identities=21% Similarity=0.291 Sum_probs=59.5
Q ss_pred cCCCCCCeEeeccc--CCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEec-CCCCCccc---cCC
Q 011002 174 LAPQEKERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY-DGNELPKV---LGL 247 (496)
Q Consensus 174 L~~~~g~~VLDlcA--GpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~-D~~~l~~~---~~~ 247 (496)
..+++|++||-.|| |.|..+..++..++ ..|+++|.++.+++.+++ .+|...+ +.. +...+... ...
T Consensus 151 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--~~V~~~~~~~~~~~~~~~---~~g~~~~--~d~~~~~~~~~~~~~~~~ 223 (345)
T 2j3h_A 151 CSPKEGETVYVSAASGAVGQLVGQLAKMMG--CYVVGSAGSKEKVDLLKT---KFGFDDA--FNYKEESDLTAALKRCFP 223 (345)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH---TSCCSEE--EETTSCSCSHHHHHHHCT
T ss_pred hCCCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH---HcCCceE--EecCCHHHHHHHHHHHhC
Confidence 45789999999987 23444444444443 489999999988876642 3576532 222 11122111 112
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
..+|+|+-.. |. ..+..++++| ++||++|..
T Consensus 224 ~~~d~vi~~~---g~--------------------------~~~~~~~~~l----~~~G~~v~~ 254 (345)
T 2j3h_A 224 NGIDIYFENV---GG--------------------------KMLDAVLVNM----NMHGRIAVC 254 (345)
T ss_dssp TCEEEEEESS---CH--------------------------HHHHHHHTTE----EEEEEEEEC
T ss_pred CCCcEEEECC---CH--------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 4699998632 21 1356677777 999998764
No 380
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=91.87 E-value=0.17 Score=50.28 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=58.5
Q ss_pred cCCCCCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---cCCCC
Q 011002 174 LAPQEKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LGLNT 249 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~~~~~ 249 (496)
..+++|++||-.||+ |+.+..+++++. ....|+++|.++.+++.+ +.+|...+ +-..|...+... ...+.
T Consensus 141 ~~~~~g~~vlV~Ga~-ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~~~-~d~~~~~~~~~~~~~~~~~~ 214 (333)
T 1v3u_A 141 CGVKGGETVLVSAAA-GAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL----KQIGFDAA-FNYKTVNSLEEALKKASPDG 214 (333)
T ss_dssp SCCCSSCEEEEESTT-BHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE-EETTSCSCHHHHHHHHCTTC
T ss_pred hCCCCCCEEEEecCC-CcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HhcCCcEE-EecCCHHHHHHHHHHHhCCC
Confidence 357899999999973 344444444332 224899999999888766 34576432 211111121110 11147
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
+|+|+..+. . ..+..++++| ++||++|...
T Consensus 215 ~d~vi~~~g---~--------------------------~~~~~~~~~l----~~~G~~v~~g 244 (333)
T 1v3u_A 215 YDCYFDNVG---G--------------------------EFLNTVLSQM----KDFGKIAICG 244 (333)
T ss_dssp EEEEEESSC---H--------------------------HHHHHHHTTE----EEEEEEEECC
T ss_pred CeEEEECCC---h--------------------------HHHHHHHHHH----hcCCEEEEEe
Confidence 999987332 0 1256677776 9999987643
No 381
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.82 E-value=0.14 Score=51.40 Aligned_cols=50 Identities=12% Similarity=0.080 Sum_probs=40.7
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV 228 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~ 228 (496)
..+|+.|||.+||+|..+.. |..++ ...+++|+++..+..++.++.+.+.
T Consensus 250 ~~~~~~VlDpF~GsGtt~~a-a~~~g--r~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLV-AERES--RKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHH-HHHTT--CEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred CCCCCEEEECCCCCCHHHHH-HHHcC--CCEEEEeCCHHHHHHHHHHHHhccc
Confidence 46899999999999976554 44443 5899999999999999999887765
No 382
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.74 E-value=0.18 Score=50.65 Aligned_cols=49 Identities=12% Similarity=0.070 Sum_probs=37.4
Q ss_pred CCCCCeEeecccCCcHHHHHHHHHcCCCcEEEEEeCCH---HHHHHHHHHHHHcC
Q 011002 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKA---SRLKSLTANLHRMG 227 (496)
Q Consensus 176 ~~~g~~VLDlcAGpGgktl~lA~l~~~~g~V~AvDis~---~rl~~l~~nl~r~g 227 (496)
..+|+.|||.+||+|..+.....+ + ...+++|+++ ..++.+++++.+.|
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~-~--r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQE-G--RNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHH-T--CEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCHHHHHHHHc-C--CcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 368999999999999776655444 2 5799999999 99999999987765
No 383
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.56 E-value=0.43 Score=47.70 Aligned_cols=99 Identities=18% Similarity=0.131 Sum_probs=60.4
Q ss_pred cCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc----ccCCC
Q 011002 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~----~~~~~ 248 (496)
..+ +|++||-.|+|+ |..++.+|..++ ...|+++|.++.+++.++ .+|.+.+ +..+..++.. .....
T Consensus 164 ~~~-~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~----~~Ga~~~--~~~~~~~~~~~v~~~~~g~ 235 (348)
T 2d8a_A 164 GPI-SGKSVLITGAGPLGLLGIAVAKASG-AYPVIVSEPSDFRRELAK----KVGADYV--INPFEEDVVKEVMDITDGN 235 (348)
T ss_dssp SCC-TTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHHHHH----HHTCSEE--ECTTTSCHHHHHHHHTTTS
T ss_pred cCC-CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HhCCCEE--ECCCCcCHHHHHHHHcCCC
Confidence 356 899999999843 334444555443 237999999999887664 4677543 3332222211 11123
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.||+|+- |+|. ...+..++++| ++||++|...
T Consensus 236 g~D~vid---~~g~-------------------------~~~~~~~~~~l----~~~G~iv~~g 267 (348)
T 2d8a_A 236 GVDVFLE---FSGA-------------------------PKALEQGLQAV----TPAGRVSLLG 267 (348)
T ss_dssp CEEEEEE---CSCC-------------------------HHHHHHHHHHE----EEEEEEEECC
T ss_pred CCCEEEE---CCCC-------------------------HHHHHHHHHHH----hcCCEEEEEc
Confidence 6999986 3332 11356677777 9999987643
No 384
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.53 E-value=0.06 Score=54.19 Aligned_cols=68 Identities=15% Similarity=0.064 Sum_probs=41.3
Q ss_pred EEEE-ecCCCCCccccCCCCCCEEEECCCCCCC-CcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEE
Q 011002 231 TIVC-NYDGNELPKVLGLNTVDRVLLDAPCSGT-GVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYI 308 (496)
Q Consensus 231 v~v~-~~D~~~l~~~~~~~~FD~VLlDpPCSg~-Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~L 308 (496)
..++ ++|+..+...++.++||+|++|||+... +. |... .........+|..+.++| +|||.|
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~--------~~~~----~~~~~~~~~~l~~~~rvL----k~~G~i 102 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLAD--------WDDH----MDYIGWAKRWLAEAERVL----SPTGSI 102 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGG--------GGTC----SSHHHHHHHHHHHHHHHE----EEEEEE
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCC--------ccCH----HHHHHHHHHHHHHHHHHc----CCCeEE
Confidence 4566 8998765444445789999999998532 11 1100 011122344566666776 999998
Q ss_pred EEEeCCC
Q 011002 309 VYSTCSI 315 (496)
Q Consensus 309 VYSTCSl 315 (496)
++. |+.
T Consensus 103 ~i~-~~~ 108 (319)
T 1eg2_A 103 AIF-GGL 108 (319)
T ss_dssp EEE-ECS
T ss_pred EEE-cCc
Confidence 775 443
No 385
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=91.50 E-value=1.1 Score=43.03 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=56.2
Q ss_pred CCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCCC
Q 011002 179 KERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLNT 249 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~~ 249 (496)
+.+||=.|++ ||.+..++..+. .+..|+.++.+...++.+...+...|. .+.++..|..+..... ..+.
T Consensus 4 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 4 DKVILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5677766655 677777776553 335899999999999999888887764 5777788987642210 0157
Q ss_pred CCEEEECCCC
Q 011002 250 VDRVLLDAPC 259 (496)
Q Consensus 250 FD~VLlDpPC 259 (496)
.|.++.++-.
T Consensus 82 iD~lVnnAG~ 91 (264)
T 3tfo_A 82 IDVLVNNAGV 91 (264)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999997743
No 386
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=91.48 E-value=3.5 Score=39.95 Aligned_cols=82 Identities=13% Similarity=-0.044 Sum_probs=53.9
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEE-ecCCCCCccccC-CCCCCEEE
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVC-NYDGNELPKVLG-LNTVDRVL 254 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~-~~D~~~l~~~~~-~~~FD~VL 254 (496)
.+.+||=.| |+|+.+.+++..+.. ...|++++.+......+...+....-.++.++ .+|..+...... ...+|.|+
T Consensus 10 ~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 10 EGSLVLVTG-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 467888666 568899888875533 34899999998877666555443221457777 788876432210 14689999
Q ss_pred ECCCCC
Q 011002 255 LDAPCS 260 (496)
Q Consensus 255 lDpPCS 260 (496)
..+...
T Consensus 89 h~A~~~ 94 (342)
T 1y1p_A 89 HIASVV 94 (342)
T ss_dssp ECCCCC
T ss_pred EeCCCC
Confidence 977543
No 387
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=91.47 E-value=2.9 Score=39.78 Aligned_cols=82 Identities=11% Similarity=0.066 Sum_probs=57.6
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHH-cCCceEEEEecCCCCCcccc--------CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHR-MGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r-~g~~nv~v~~~D~~~l~~~~--------~~ 247 (496)
.|.+||=.|++ ||.+..++..+. ....|+.+|.+...++.+...+.. .+-.++.++..|..+..... ..
T Consensus 7 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTGGS-SGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 36677777755 667777776553 334899999999999988888876 55455888889988743210 11
Q ss_pred CCCCEEEECCCCC
Q 011002 248 NTVDRVLLDAPCS 260 (496)
Q Consensus 248 ~~FD~VLlDpPCS 260 (496)
+..|.++.++-.+
T Consensus 86 g~id~lvnnAg~~ 98 (265)
T 3lf2_A 86 GCASILVNNAGQG 98 (265)
T ss_dssp CSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 5789999977543
No 388
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=91.42 E-value=0.19 Score=50.68 Aligned_cols=97 Identities=10% Similarity=0.073 Sum_probs=59.2
Q ss_pred CCC-CCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC-CCccccCCCCCC
Q 011002 175 APQ-EKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN-ELPKVLGLNTVD 251 (496)
Q Consensus 175 ~~~-~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~-~l~~~~~~~~FD 251 (496)
.++ +|++||=.|+|+ |..++.+|..++ ..|+++|.++.+++.+. +.+|.+.+ +..+-. .+.... +.||
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~~~~~~~~~~~---~~lGa~~v--i~~~~~~~~~~~~--~g~D 246 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMG--HHVTVISSSNKKREEAL---QDLGADDY--VIGSDQAKMSELA--DSLD 246 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSTTHHHHHH---TTSCCSCE--EETTCHHHHHHST--TTEE
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCChHHHHHHH---HHcCCcee--eccccHHHHHHhc--CCCC
Confidence 567 999999998643 333445555553 48999999998876654 25787643 222211 111111 4699
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
+||- |+|... .+..++++| ++||++|...
T Consensus 247 ~vid---~~g~~~-------------------------~~~~~~~~l----~~~G~iv~~G 275 (357)
T 2cf5_A 247 YVID---TVPVHH-------------------------ALEPYLSLL----KLDGKLILMG 275 (357)
T ss_dssp EEEE---CCCSCC-------------------------CSHHHHTTE----EEEEEEEECS
T ss_pred EEEE---CCCChH-------------------------HHHHHHHHh----ccCCEEEEeC
Confidence 9985 444321 145566776 9999988643
No 389
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=91.31 E-value=1.5 Score=42.25 Aligned_cols=79 Identities=11% Similarity=0.145 Sum_probs=57.1
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~ 248 (496)
.|.+||=.|+ +||.+.+++..+. .+..|++++.++..++.+...+...|..++.++..|..+.... . ..+
T Consensus 27 ~~k~vlITGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 27 QGKKVIVTGA-SKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 3678887774 5778888776543 3358999999999998888888777766788888998764211 0 014
Q ss_pred CCCEEEECC
Q 011002 249 TVDRVLLDA 257 (496)
Q Consensus 249 ~FD~VLlDp 257 (496)
.+|.|+.++
T Consensus 106 ~iD~li~na 114 (286)
T 1xu9_A 106 GLDMLILNH 114 (286)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 799999873
No 390
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=91.30 E-value=0.72 Score=45.21 Aligned_cols=82 Identities=20% Similarity=0.187 Sum_probs=58.5
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.|.+||=.|+ +||.+..++..+. ....|+.+|.+...++.+...+...+..++.++..|..+..... ..+
T Consensus 40 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 40 SARSVLVTGG-TKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 4667776665 5677877777553 33489999999999988888887776567888899998742210 115
Q ss_pred CCCEEEECCCCC
Q 011002 249 TVDRVLLDAPCS 260 (496)
Q Consensus 249 ~FD~VLlDpPCS 260 (496)
.+|.++.++-..
T Consensus 119 ~iD~lvnnAg~~ 130 (293)
T 3rih_A 119 ALDVVCANAGIF 130 (293)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999977543
No 391
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=91.25 E-value=1.8 Score=41.24 Aligned_cols=82 Identities=9% Similarity=0.005 Sum_probs=56.8
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccc---c-CCCCCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKV---L-GLNTVD 251 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~---~-~~~~FD 251 (496)
.|.+||=.|++ ||.+.+++..+. ....|+.+|.+...++.+.+.+...+. ..+.++..|..+.... . ..+.+|
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 46778877754 777877776553 335899999999999888888877653 3467778888763211 0 125799
Q ss_pred EEEECCCCC
Q 011002 252 RVLLDAPCS 260 (496)
Q Consensus 252 ~VLlDpPCS 260 (496)
.++.++-..
T Consensus 88 ~lv~nAg~~ 96 (267)
T 3t4x_A 88 ILINNLGIF 96 (267)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999977543
No 392
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=90.82 E-value=0.86 Score=43.16 Aligned_cols=81 Identities=11% Similarity=0.054 Sum_probs=54.5
Q ss_pred CCCCeEeecccC-CcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------C
Q 011002 177 QEKERVIDMAAA-PGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------G 246 (496)
Q Consensus 177 ~~g~~VLDlcAG-pGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~ 246 (496)
..+.+||=.|++ +||.+.+++..+. ....|+.++.+....+.+.+.....+ .+.++..|..+..... .
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHHHHHHH
Confidence 457889988884 4788888877553 33489999988655555555555554 3667788987643210 1
Q ss_pred CCCCCEEEECCCC
Q 011002 247 LNTVDRVLLDAPC 259 (496)
Q Consensus 247 ~~~FD~VLlDpPC 259 (496)
.+..|.++.++-.
T Consensus 90 ~g~id~lv~nAg~ 102 (271)
T 3ek2_A 90 WDSLDGLVHSIGF 102 (271)
T ss_dssp CSCEEEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 2578999997743
No 393
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=90.71 E-value=0.17 Score=52.90 Aligned_cols=51 Identities=14% Similarity=0.043 Sum_probs=37.3
Q ss_pred cCCCCCCeEeeccc-C-CcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCce
Q 011002 174 LAPQEKERVIDMAA-A-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN 230 (496)
Q Consensus 174 L~~~~g~~VLDlcA-G-pGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~n 230 (496)
..+++|++||=.|| | .|..++.+|..++ ..|++++.++.+++.++ .+|.+.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~G--a~vi~~~~~~~~~~~~~----~lGa~~ 276 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGG--ANPICVVSSPQKAEICR----AMGAEA 276 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HHTCCE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CeEEEEECCHHHHHHHH----hhCCcE
Confidence 35789999998887 3 3555666666653 47889999999988764 478764
No 394
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=90.70 E-value=1.8 Score=41.08 Aligned_cols=79 Identities=11% Similarity=0.150 Sum_probs=53.4
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~ 248 (496)
.|.+||=.| |+||.+.+++..+. ....|+.+|.+...++.+...+ + .++.++..|..+.... . ..+
T Consensus 7 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 7 EGKSALITG-SARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---G-PAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 467788776 45778888877553 3348999999998877766554 3 2467788898764321 0 124
Q ss_pred CCCEEEECCCCCC
Q 011002 249 TVDRVLLDAPCSG 261 (496)
Q Consensus 249 ~FD~VLlDpPCSg 261 (496)
.+|.|+.++-...
T Consensus 82 ~id~lv~~Ag~~~ 94 (259)
T 4e6p_A 82 GLDILVNNAALFD 94 (259)
T ss_dssp SCCEEEECCCCCC
T ss_pred CCCEEEECCCcCC
Confidence 7999999875433
No 395
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=90.67 E-value=3.9 Score=38.89 Aligned_cols=81 Identities=12% Similarity=0.069 Sum_probs=55.4
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeC-CHHHHHHHHHHHHHc-CCceEEEEecCCCCC----cccc-----
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEM-KASRLKSLTANLHRM-GVTNTIVCNYDGNEL----PKVL----- 245 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDi-s~~rl~~l~~nl~r~-g~~nv~v~~~D~~~l----~~~~----- 245 (496)
.|.+||=.|+ +||.+.+++..+.. ...|++++. ++..++.+.+.+... | .++.++..|..+. ....
T Consensus 10 ~~k~~lVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 10 ECPAAVITGG-ARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-GSAVLCKGDLSLSSSLLDCCEDIIDC 87 (276)
T ss_dssp -CCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC-CceEEEeccCCCccccHHHHHHHHHH
Confidence 3567776664 57788888775533 348999999 998888887777655 4 3577888898775 2110
Q ss_pred ---CCCCCCEEEECCCCC
Q 011002 246 ---GLNTVDRVLLDAPCS 260 (496)
Q Consensus 246 ---~~~~FD~VLlDpPCS 260 (496)
..+.+|.|+.++-..
T Consensus 88 ~~~~~g~id~lv~nAg~~ 105 (276)
T 1mxh_A 88 SFRAFGRCDVLVNNASAY 105 (276)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHhcCCCCEEEECCCCC
Confidence 014789999987543
No 396
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=90.53 E-value=0.28 Score=49.67 Aligned_cols=97 Identities=11% Similarity=0.125 Sum_probs=57.7
Q ss_pred CCC-CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC-CCccccCCCCCC
Q 011002 175 APQ-EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN-ELPKVLGLNTVD 251 (496)
Q Consensus 175 ~~~-~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~-~l~~~~~~~~FD 251 (496)
.+. +|++||=+|+ |+.++.++++... ...|++++.++.+++.+. +.+|.+.+ +..+-. .+.... +.||
T Consensus 183 ~~~~~g~~VlV~Ga--G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~---~~lGa~~v--~~~~~~~~~~~~~--~~~D 253 (366)
T 1yqd_A 183 GLDEPGKHIGIVGL--GGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL---KNFGADSF--LVSRDQEQMQAAA--GTLD 253 (366)
T ss_dssp TCCCTTCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH---HTSCCSEE--EETTCHHHHHHTT--TCEE
T ss_pred CcCCCCCEEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HhcCCceE--EeccCHHHHHHhh--CCCC
Confidence 566 8999999986 5555444443321 248999999998876654 25676533 222211 111111 4799
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
+|+- |+|... .+..+++++ ++||++|...
T Consensus 254 ~vid---~~g~~~-------------------------~~~~~~~~l----~~~G~iv~~g 282 (366)
T 1yqd_A 254 GIID---TVSAVH-------------------------PLLPLFGLL----KSHGKLILVG 282 (366)
T ss_dssp EEEE---CCSSCC-------------------------CSHHHHHHE----EEEEEEEECC
T ss_pred EEEE---CCCcHH-------------------------HHHHHHHHH----hcCCEEEEEc
Confidence 9986 444321 134566776 9999987643
No 397
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=90.48 E-value=6.1 Score=37.59 Aligned_cols=80 Identities=14% Similarity=0.091 Sum_probs=56.8
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~ 248 (496)
.+.+||=.| |+|+.+.+++..+. ....|+++|.++..++.+...+...|. ++.++..|..+.... + ..+
T Consensus 30 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 30 TGEIVLITG-AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 366788666 45778888877553 335899999999998888887777664 577888898764311 0 114
Q ss_pred CCCEEEECCCC
Q 011002 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~FD~VLlDpPC 259 (496)
.+|.|+.++-.
T Consensus 108 ~iD~li~~Ag~ 118 (272)
T 1yb1_A 108 DVSILVNNAGV 118 (272)
T ss_dssp CCSEEEECCCC
T ss_pred CCcEEEECCCc
Confidence 79999997743
No 398
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=90.46 E-value=0.63 Score=46.47 Aligned_cols=98 Identities=13% Similarity=0.145 Sum_probs=59.3
Q ss_pred CCCCCCeEeecccC--CcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCC----ccccCCC
Q 011002 175 APQEKERVIDMAAA--PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL----PKVLGLN 248 (496)
Q Consensus 175 ~~~~g~~VLDlcAG--pGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l----~~~~~~~ 248 (496)
.+++|++||-.|+| .|..++.++..+. ...|+++|.++.+++.++ .+|...+ +......+ ......+
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~~~~~~~~~~ 239 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAK----RAGADYV--INASMQDPLAEIRRITESK 239 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHH----HHTCSEE--EETTTSCHHHHHHHHTTTS
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCCEE--ecCCCccHHHHHHHHhcCC
Confidence 57899999999986 3334444555441 248999999999987764 3576532 22221121 1111114
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
.+|+|+-. +|.. ..+..++++| ++||++|..
T Consensus 240 ~~d~vi~~---~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 270 (347)
T 1jvb_A 240 GVDAVIDL---NNSE-------------------------KTLSVYPKAL----AKQGKYVMV 270 (347)
T ss_dssp CEEEEEES---CCCH-------------------------HHHTTGGGGE----EEEEEEEEC
T ss_pred CceEEEEC---CCCH-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 79999863 2221 1355666776 999998764
No 399
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=90.44 E-value=2.8 Score=39.92 Aligned_cols=81 Identities=15% Similarity=0.168 Sum_probs=59.1
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.|.+||=.|+ +||.+.+++..+. ....|+.++.+...++.+...+...+-.++.++..|..+..... ..+
T Consensus 9 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 9 QGRSVVVTGG-TKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 4677887775 4677887777553 33489999999999999888888777567888899988743210 014
Q ss_pred CCCEEEECCCC
Q 011002 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~FD~VLlDpPC 259 (496)
.+|.++.++-.
T Consensus 88 ~id~lvnnAg~ 98 (262)
T 3pk0_A 88 GIDVVCANAGV 98 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999997743
No 400
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=90.35 E-value=2.1 Score=40.64 Aligned_cols=82 Identities=15% Similarity=0.174 Sum_probs=57.6
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.|.+||=.|++ ||.+.+++..+. ....|+.+|.+...++.+...+...|. ++.++..|..+..... ..+
T Consensus 11 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 11 NDAVAIVTGAA-AGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp TTCEEEECSCS-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46777766655 667777776543 234899999999999998888887764 4778888987643210 014
Q ss_pred CCCEEEECCCCCC
Q 011002 249 TVDRVLLDAPCSG 261 (496)
Q Consensus 249 ~FD~VLlDpPCSg 261 (496)
..|.++.++--..
T Consensus 89 ~id~lv~nAg~~~ 101 (256)
T 3gaf_A 89 KITVLVNNAGGGG 101 (256)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 7999999775433
No 401
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.32 E-value=1.3 Score=43.73 Aligned_cols=97 Identities=16% Similarity=0.202 Sum_probs=60.0
Q ss_pred cCCCCCCeEeeccc--CCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCc----cccCC
Q 011002 174 LAPQEKERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGL 247 (496)
Q Consensus 174 L~~~~g~~VLDlcA--GpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~----~~~~~ 247 (496)
..+++|++||-.|+ |.|..+..++..++ ..|+++|.++.+++.+++ +|...+ +..+...+. .....
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~~----~g~~~~--~d~~~~~~~~~i~~~~~~ 212 (333)
T 1wly_A 141 HKVKPGDYVLIHAAAGGMGHIMVPWARHLG--ATVIGTVSTEEKAETARK----LGCHHT--INYSTQDFAEVVREITGG 212 (333)
T ss_dssp SCCCTTCEEEETTTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----HTCSEE--EETTTSCHHHHHHHHHTT
T ss_pred hCCCCCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCCCEE--EECCCHHHHHHHHHHhCC
Confidence 35789999999985 34445555555543 589999999988887653 576532 222222211 11112
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
..+|+|+- |+|.. .+..+++++ ++||++|..
T Consensus 213 ~~~d~vi~---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~ 243 (333)
T 1wly_A 213 KGVDVVYD---SIGKD--------------------------TLQKSLDCL----RPRGMCAAY 243 (333)
T ss_dssp CCEEEEEE---CSCTT--------------------------THHHHHHTE----EEEEEEEEC
T ss_pred CCCeEEEE---CCcHH--------------------------HHHHHHHhh----ccCCEEEEE
Confidence 46999986 33321 256677777 999988754
No 402
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=90.27 E-value=2.3 Score=39.95 Aligned_cols=80 Identities=15% Similarity=0.193 Sum_probs=54.9
Q ss_pred CCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeC-CHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCC
Q 011002 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDi-s~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~ 248 (496)
|.+||=.| |+||.+.+++..+.. ...|++++. ++..++.+.+.+...|. ++.++..|..+.... + ..+
T Consensus 4 ~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 4 GKVALVTG-ASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 56777666 457788888775543 348999998 88888888777776653 477778898764321 0 014
Q ss_pred CCCEEEECCCCC
Q 011002 249 TVDRVLLDAPCS 260 (496)
Q Consensus 249 ~FD~VLlDpPCS 260 (496)
.+|.++.++-..
T Consensus 82 ~id~lv~nAg~~ 93 (246)
T 2uvd_A 82 QVDILVNNAGVT 93 (246)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 799999977533
No 403
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=90.22 E-value=2.3 Score=40.86 Aligned_cols=81 Identities=14% Similarity=0.119 Sum_probs=56.4
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTG-LIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g-~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.+.+||=.|+ +|+.+..++..+...| .|++++.++..++.+.+.+...+. ++.++..|..+..... ..+
T Consensus 43 ~~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 43 ENKVALVTGA-GRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp SSCEEEEEST-TSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 3667886665 5888888887665444 788899999888887777766554 4777888987642210 114
Q ss_pred CCCEEEECCCCC
Q 011002 249 TVDRVLLDAPCS 260 (496)
Q Consensus 249 ~FD~VLlDpPCS 260 (496)
.+|.|+.++-..
T Consensus 121 ~id~li~~Ag~~ 132 (285)
T 2c07_A 121 NVDILVNNAGIT 132 (285)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999977543
No 404
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=90.10 E-value=0.62 Score=45.84 Aligned_cols=95 Identities=13% Similarity=0.156 Sum_probs=58.8
Q ss_pred CCCCC-eEeeccc--CCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCE
Q 011002 176 PQEKE-RVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 176 ~~~g~-~VLDlcA--GpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~ 252 (496)
+++++ +||=.|| +.|..++++|..++ ..|++++.++.+++.+++ +|.+.+. -..|... ......+.+|+
T Consensus 143 ~~~~~g~VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~vi-~~~~~~~-~~~~~~~~~d~ 214 (324)
T 3nx4_A 143 IRPQDGEVVVTGASGGVGSTAVALLHKLG--YQVAAVSGRESTHGYLKS----LGANRIL-SRDEFAE-SRPLEKQLWAG 214 (324)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGGGHHHHHH----HTCSEEE-EGGGSSC-CCSSCCCCEEE
T ss_pred cCCCCCeEEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCCEEE-ecCCHHH-HHhhcCCCccE
Confidence 44432 4887776 34666667777654 489999999999887754 7876432 1122111 11122357998
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
|+- |+|. ..+..++++| ++||++|..
T Consensus 215 v~d---~~g~--------------------------~~~~~~~~~l----~~~G~iv~~ 240 (324)
T 3nx4_A 215 AID---TVGD--------------------------KVLAKVLAQM----NYGGCVAAC 240 (324)
T ss_dssp EEE---SSCH--------------------------HHHHHHHHTE----EEEEEEEEC
T ss_pred EEE---CCCc--------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 764 3321 1367778887 999998864
No 405
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=90.04 E-value=2.5 Score=39.11 Aligned_cols=80 Identities=15% Similarity=0.136 Sum_probs=53.1
Q ss_pred CeEeecccCCcHHHHHHHHHcCCCc-EEEEE-eCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCCC
Q 011002 180 ERVIDMAAAPGGKTTYIAALMKNTG-LIYAN-EMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLNT 249 (496)
Q Consensus 180 ~~VLDlcAGpGgktl~lA~l~~~~g-~V~Av-Dis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~~ 249 (496)
.+||=.| |+|+.+.+++..+...| .|+++ +.++..++.+...+...|.....++..|..+..... ..+.
T Consensus 2 k~vlITG-asggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 2 RKALITG-ASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CEEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 3566555 46888888887664444 78887 889988888777777666432333778887643210 0147
Q ss_pred CCEEEECCCCC
Q 011002 250 VDRVLLDAPCS 260 (496)
Q Consensus 250 FD~VLlDpPCS 260 (496)
+|.|+.++-..
T Consensus 81 ~d~li~~Ag~~ 91 (245)
T 2ph3_A 81 LDTLVNNAGIT 91 (245)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 99999977543
No 406
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=90.00 E-value=1.2 Score=46.53 Aligned_cols=114 Identities=11% Similarity=0.169 Sum_probs=65.8
Q ss_pred CCcHHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHH------------HHHc-CCceEEEEecCCCCCccccCCCCCCEE
Q 011002 188 APGGKTTYIAALMKNTG-LIYANEMKASRLKSLTAN------------LHRM-GVTNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 188 GpGgktl~lA~l~~~~g-~V~AvDis~~rl~~l~~n------------l~r~-g~~nv~v~~~D~~~l~~~~~~~~FD~V 253 (496)
|.|..++.+|..+...| .|+++|+++++++.+.+. +++. .-.++.+. .|. ...|+|
T Consensus 18 GlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td~---------~~aDvv 87 (431)
T 3ojo_A 18 GLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TTP---------EASDVF 87 (431)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SSC---------CCCSEE
T ss_pred eeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cch---------hhCCEE
Confidence 55666666666554444 899999999999988762 1110 01234333 231 357999
Q ss_pred EECCCCCCCCccc---CCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHh
Q 011002 254 LLDAPCSGTGVIS---KDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKK 330 (496)
Q Consensus 254 LlDpPCSg~Gvi~---r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~ 330 (496)
++=.| +..-. ..|++.. +..+.+.+.+.+++|..+|+ ..|+.|.-.+.+...+++.
T Consensus 88 ii~Vp---Tp~~~~~~~~~Dl~~-----------------V~~~~~~i~~~l~~g~iVV~-~STV~pgtt~~v~~~i~e~ 146 (431)
T 3ojo_A 88 IIAVP---TPNNDDQYRSCDISL-----------------VMRALDSILPFLKKGNTIIV-ESTIAPKTMDDFVKPVIEN 146 (431)
T ss_dssp EECCC---CCBCSSSSCBBCCHH-----------------HHHHHHHHGGGCCTTEEEEE-CSCCCTTHHHHTHHHHHHT
T ss_pred EEEeC---CCccccccCCccHHH-----------------HHHHHHHHHHhCCCCCEEEE-ecCCChhHHHHHHHHHHHH
Confidence 98544 32210 2233311 23333334444588766665 4488888888888888775
Q ss_pred CC
Q 011002 331 RD 332 (496)
Q Consensus 331 ~~ 332 (496)
.+
T Consensus 147 ~g 148 (431)
T 3ojo_A 147 LG 148 (431)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 407
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.87 E-value=0.84 Score=45.02 Aligned_cols=97 Identities=20% Similarity=0.156 Sum_probs=58.4
Q ss_pred cCCCCCCeEeecccC--CcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCc----cccCC
Q 011002 174 LAPQEKERVIDMAAA--PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGL 247 (496)
Q Consensus 174 L~~~~g~~VLDlcAG--pGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~----~~~~~ 247 (496)
..+++|++||-.|++ .|..+..++...+ ..|+++|.++.+++.+++ +|...+ +..+-.++. .....
T Consensus 136 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~V~~~~~~~~~~~~~~~----~g~~~~--~~~~~~~~~~~~~~~~~~ 207 (327)
T 1qor_A 136 YEIKPDEQFLFHAAAGGVGLIACQWAKALG--AKLIGTVGTAQKAQSALK----AGAWQV--INYREEDLVERLKEITGG 207 (327)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHH----HTCSEE--EETTTSCHHHHHHHHTTT
T ss_pred hCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH----cCCCEE--EECCCccHHHHHHHHhCC
Confidence 357889999998843 2333344444433 489999999998877654 576532 222211211 11112
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
..+|+|+. |+| +. .+..++++| ++||++|..
T Consensus 208 ~~~D~vi~---~~g-~~-------------------------~~~~~~~~l----~~~G~iv~~ 238 (327)
T 1qor_A 208 KKVRVVYD---SVG-RD-------------------------TWERSLDCL----QRRGLMVSF 238 (327)
T ss_dssp CCEEEEEE---CSC-GG-------------------------GHHHHHHTE----EEEEEEEEC
T ss_pred CCceEEEE---CCc-hH-------------------------HHHHHHHHh----cCCCEEEEE
Confidence 46999987 333 21 156677777 999998764
No 408
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=89.86 E-value=2.9 Score=39.15 Aligned_cols=80 Identities=14% Similarity=0.160 Sum_probs=57.3
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.+.+||=.|+ +||.+.+++..+.. ...|+++|.+...++.+...+...+. .+.++..|..+..... ..+
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4677887775 57778877775533 34899999999999999888877664 5778888988743210 014
Q ss_pred CCCEEEECCCC
Q 011002 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~FD~VLlDpPC 259 (496)
.+|.|+.++--
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999997743
No 409
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=89.70 E-value=4.3 Score=38.41 Aligned_cols=80 Identities=11% Similarity=0.081 Sum_probs=58.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.|.+||=.|+ +||.+.+++..+. .+..|+.++.+...++.+...+...|. ++.++..|..+..... ..+
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 28 SGQVAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4678887775 5778888777553 335899999999999999888887764 5778888987643210 014
Q ss_pred CCCEEEECCCC
Q 011002 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~FD~VLlDpPC 259 (496)
..|.|+.++-.
T Consensus 106 ~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 RCDVLVNNAGV 116 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999997653
No 410
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=89.55 E-value=0.35 Score=48.79 Aligned_cols=91 Identities=12% Similarity=0.133 Sum_probs=55.6
Q ss_pred CCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCH---HHHHHHHHHHHHcCCceEEEEecCCCCCcccc--CCCCCCE
Q 011002 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKA---SRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--GLNTVDR 252 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~---~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--~~~~FD~ 252 (496)
|++||-.|+ |+.++.+++++.. ...|+++|.++ .+++.++ .+|.+.+ ..+ .+.... ....||+
T Consensus 181 g~~VlV~Ga--G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~----~~ga~~v---~~~--~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGT--GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIE----ETKTNYY---NSS--NGYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESC--HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHH----HHTCEEE---ECT--TCSHHHHHHHCCEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHH----HhCCcee---chH--HHHHHHHHhCCCCCE
Confidence 999999997 6665554443321 13899999998 7776543 4676533 222 222111 0146999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHH-HHHHHhhhhcCCCCcEEEEEe
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLI-LAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL-~~A~~~L~~~lkpGG~LVYST 312 (496)
|+- |+|... .+ ..+++++ ++||++|...
T Consensus 250 vid---~~g~~~-------------------------~~~~~~~~~l----~~~G~iv~~g 278 (366)
T 2cdc_A 250 IID---ATGADV-------------------------NILGNVIPLL----GRNGVLGLFG 278 (366)
T ss_dssp EEE---CCCCCT-------------------------HHHHHHGGGE----EEEEEEEECS
T ss_pred EEE---CCCChH-------------------------HHHHHHHHHH----hcCCEEEEEe
Confidence 986 333210 24 6677776 9999988653
No 411
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=89.48 E-value=2.3 Score=40.51 Aligned_cols=124 Identities=12% Similarity=0.073 Sum_probs=73.1
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCc-EEEEEeC---CHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTG-LIYANEM---KASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL-------- 245 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g-~V~AvDi---s~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~-------- 245 (496)
.|.+||=.|++ ||.+..++..+...| .|+.++. +...++.+...+...|. ++.++..|..+.....
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA-KVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTC-EEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHH
Confidence 46778877755 668888887665444 7888765 45567777777766553 5788889988743210
Q ss_pred CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~----~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
..+..|.++.++-....+.+ ...+.++..... .-...++..++..+ +.+|.||+.+.+
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m----~~~g~iv~isS~ 149 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPI-------VETSEAEFDAMDTINNKVAYFFIKQAAKHM----NPNGHIITIATS 149 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCG-------GGCCHHHHHHHHHHHHHHHHHHHHHHHTTE----EEEEEEEEECCC
T ss_pred HcCCCCEEEECCCCCCCCCc-------ccCCHHHHHHHHHHHhHHHHHHHHHHHHhh----cCCCEEEEEech
Confidence 01478999987643322211 123334333222 12233445555544 678998887543
No 412
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.47 E-value=2.7 Score=40.08 Aligned_cols=121 Identities=16% Similarity=0.162 Sum_probs=73.9
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCC------------HHHHHHHHHHHHHcCCceEEEEecCCCCCccc
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK------------ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV 244 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis------------~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~ 244 (496)
.|.+||=.|++ ||.+.+++..+. ....|+.+|.+ ...++.+...+...|. ++.++..|..+....
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEccCCCHHHH
Confidence 46778877755 667777776553 33589999987 7888888887777664 577888898774321
Q ss_pred ---c-----CCCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 245 ---L-----GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 245 ---~-----~~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~----~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
+ ..+.+|.++.++-....+. + .+.++..... .-...++..++.. ++.+|.||+.+
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~-----~----~~~~~~~~~~~~N~~g~~~l~~~~~~~----~~~~g~iv~is 153 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGA-----H----LPVQAFADAFDVDFVGVINTVHAALPY----LTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCT-----T----CCTHHHHHHHHHHTHHHHHHHHHHGGG----CCTTCEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccC-----c----CCHHHHHHHhhhhhhhhHHHHHHHHHH----hhcCcEEEEec
Confidence 0 0147999999875433331 0 1222222211 1222344444444 47889988865
Q ss_pred C
Q 011002 313 C 313 (496)
Q Consensus 313 C 313 (496)
.
T Consensus 154 S 154 (287)
T 3pxx_A 154 S 154 (287)
T ss_dssp C
T ss_pred c
Confidence 4
No 413
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=89.43 E-value=2.6 Score=40.67 Aligned_cols=80 Identities=14% Similarity=0.095 Sum_probs=55.5
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHc----CCceEEEEecCCCCCccc---cC---
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRM----GVTNTIVCNYDGNELPKV---LG--- 246 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~----g~~nv~v~~~D~~~l~~~---~~--- 246 (496)
.|.+||=.|+ +|+.+.+++..+. ....|++++.+...++.+...+... .-.++.++..|..+.... +.
T Consensus 17 ~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 17 QGQVAIVTGG-ATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 4677887775 5888888877553 3358999999999888887777652 123578888998764221 10
Q ss_pred --CCCCCEEEECCC
Q 011002 247 --LNTVDRVLLDAP 258 (496)
Q Consensus 247 --~~~FD~VLlDpP 258 (496)
.+.+|.|+.++-
T Consensus 96 ~~~g~id~li~~Ag 109 (303)
T 1yxm_A 96 DTFGKINFLVNNGG 109 (303)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 146999999765
No 414
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=89.35 E-value=2.4 Score=40.13 Aligned_cols=80 Identities=16% Similarity=0.140 Sum_probs=54.4
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHc-CCceEEEEecCCCCCccc---c-----CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRM-GVTNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~-g~~nv~v~~~D~~~l~~~---~-----~~ 247 (496)
.|.+||=.|+ +|+.+.+++..+. ....|++++.++..++.+...+... |. ++.++..|..+.... + ..
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 6 SGKVAVITGS-SSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVDVATPEGVDAVVESVRSSF 83 (263)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3567776665 5778888877553 3348999999998888777766554 53 477788898764211 0 01
Q ss_pred CCCCEEEECCCC
Q 011002 248 NTVDRVLLDAPC 259 (496)
Q Consensus 248 ~~FD~VLlDpPC 259 (496)
+.+|.|+.++-.
T Consensus 84 g~id~lv~~Ag~ 95 (263)
T 3ai3_A 84 GGADILVNNAGT 95 (263)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999997753
No 415
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=89.33 E-value=0.33 Score=48.03 Aligned_cols=97 Identities=14% Similarity=0.148 Sum_probs=59.2
Q ss_pred CCCCCC-eEeeccc--CCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEE-ecCCCCCccccCCCCC
Q 011002 175 APQEKE-RVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVC-NYDGNELPKVLGLNTV 250 (496)
Q Consensus 175 ~~~~g~-~VLDlcA--GpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~-~~D~~~l~~~~~~~~F 250 (496)
.+++|+ +||-.|| |.|..++.+|..++ ..|++++.++.+++.++ .+|.+.+.-. ..|...... .....|
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~----~lGa~~v~~~~~~~~~~~~~-~~~~~~ 218 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNREAADYLK----QLGASEVISREDVYDGTLKA-LSKQQW 218 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSSTHHHHH----HHTCSEEEEHHHHCSSCCCS-SCCCCE
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCcEEEECCCchHHHHHH-hhcCCc
Confidence 567886 8999987 33555566666654 46999999988887664 4687643211 111111111 122469
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 251 D~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
|+|+- |+|. ..+..+++++ ++||+++..
T Consensus 219 d~vid---~~g~--------------------------~~~~~~~~~l----~~~G~iv~~ 246 (330)
T 1tt7_A 219 QGAVD---PVGG--------------------------KQLASLLSKI----QYGGSVAVS 246 (330)
T ss_dssp EEEEE---SCCT--------------------------HHHHHHHTTE----EEEEEEEEC
T ss_pred cEEEE---CCcH--------------------------HHHHHHHHhh----cCCCEEEEE
Confidence 99875 3331 1256677776 999998764
No 416
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=89.27 E-value=0.28 Score=49.13 Aligned_cols=98 Identities=13% Similarity=0.060 Sum_probs=58.3
Q ss_pred CCCCCCeEeecccC--CcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecC-CCCCcccc---CCC
Q 011002 175 APQEKERVIDMAAA--PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD-GNELPKVL---GLN 248 (496)
Q Consensus 175 ~~~~g~~VLDlcAG--pGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D-~~~l~~~~---~~~ 248 (496)
.+++|++||-.|++ .|..+..++...+ ..|+++|.++.+++.++ .+|...+ +... ...+.... ..+
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--a~V~~~~~~~~~~~~~~----~~g~~~~--~d~~~~~~~~~~~~~~~~~ 237 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMG--YRVLGIDGGEGKEELFR----SIGGEVF--IDFTKEKDIVGAVLKATDG 237 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECSTTHHHHHH----HTTCCEE--EETTTCSCHHHHHHHHHTS
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCC--CcEEEEcCCHHHHHHHH----HcCCceE--EecCccHhHHHHHHHHhCC
Confidence 57899999999973 3444444444432 48999999988876554 4676532 2211 12221111 012
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.+|+|+... |. ...+..++++| ++||+||...
T Consensus 238 ~~D~vi~~~---g~-------------------------~~~~~~~~~~l----~~~G~iv~~g 269 (347)
T 2hcy_A 238 GAHGVINVS---VS-------------------------EAAIEASTRYV----RANGTTVLVG 269 (347)
T ss_dssp CEEEEEECS---SC-------------------------HHHHHHHTTSE----EEEEEEEECC
T ss_pred CCCEEEECC---Cc-------------------------HHHHHHHHHHH----hcCCEEEEEe
Confidence 699998632 21 01356677776 9999988643
No 417
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=89.24 E-value=3.5 Score=39.81 Aligned_cols=79 Identities=16% Similarity=0.137 Sum_probs=58.1
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc--------cCCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV--------LGLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~--------~~~~ 248 (496)
.|..+|=.|++ +|.+..+|..+. ....|+.+|.+.+.++.+.+.+...|. ++..+..|..+.... ...+
T Consensus 8 ~gKvalVTGas-~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 8 TGKTALVTGSA-RGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 47788877766 557777776553 345899999999999999999988875 467778898764211 0236
Q ss_pred CCCEEEECCC
Q 011002 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~FD~VLlDpP 258 (496)
+.|.++.++-
T Consensus 86 ~iDiLVNNAG 95 (255)
T 4g81_D 86 HVDILINNAG 95 (255)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEECCC
Confidence 8999999874
No 418
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=89.17 E-value=2.1 Score=40.04 Aligned_cols=80 Identities=13% Similarity=0.056 Sum_probs=53.2
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceE-EEEecCCCCCcccc---C----CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNT-IVCNYDGNELPKVL---G----LN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv-~v~~~D~~~l~~~~---~----~~ 248 (496)
.+.+||=.| |+|+.+.+++..+.. ...|++++.++..++.+.+.+ +. ++ .++..|..+..... . .+
T Consensus 10 ~~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (254)
T 2wsb_A 10 DGACAAVTG-AGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GA-AVAARIVADVTDAEAMTAAAAEAEAVA 84 (254)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GG-GEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cc-cceeEEEEecCCHHHHHHHHHHHHhhC
Confidence 466788666 457888888775543 348999999998877665554 32 34 77888987643211 0 14
Q ss_pred CCCEEEECCCCCCC
Q 011002 249 TVDRVLLDAPCSGT 262 (496)
Q Consensus 249 ~FD~VLlDpPCSg~ 262 (496)
.+|.|+.++-....
T Consensus 85 ~id~li~~Ag~~~~ 98 (254)
T 2wsb_A 85 PVSILVNSAGIARL 98 (254)
T ss_dssp CCCEEEECCCCCCC
T ss_pred CCcEEEECCccCCC
Confidence 78999998754433
No 419
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=89.16 E-value=0.21 Score=48.94 Aligned_cols=92 Identities=24% Similarity=0.324 Sum_probs=58.8
Q ss_pred CCCCCeEeeccc--CCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC-CCCccccCCCCCCE
Q 011002 176 PQEKERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG-NELPKVLGLNTVDR 252 (496)
Q Consensus 176 ~~~g~~VLDlcA--GpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~-~~l~~~~~~~~FD~ 252 (496)
+++|++||-.|+ |.|..++.++..++ ..|+++|.++.+++.++ .+|...+ +..+. .++.... ..||+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~ga~~~--~~~~~~~~~~~~~--~~~d~ 192 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG--LRVLAAASRPEKLALPL----ALGAEEA--ATYAEVPERAKAW--GGLDL 192 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSGGGSHHHH----HTTCSEE--EEGGGHHHHHHHT--TSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----hcCCCEE--EECCcchhHHHHh--cCceE
Confidence 789999999997 23445555665543 48999999999887664 4677543 22221 1122212 46999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 253 VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
|+- .. + . .+..+++++ ++||+++..
T Consensus 193 vid-~g--~-~--------------------------~~~~~~~~l----~~~G~~v~~ 217 (302)
T 1iz0_A 193 VLE-VR--G-K--------------------------EVEESLGLL----AHGGRLVYI 217 (302)
T ss_dssp EEE-CS--C-T--------------------------THHHHHTTE----EEEEEEEEC
T ss_pred EEE-CC--H-H--------------------------HHHHHHHhh----ccCCEEEEE
Confidence 885 43 1 1 156677776 999998753
No 420
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=89.05 E-value=3.8 Score=39.05 Aligned_cols=81 Identities=17% Similarity=0.151 Sum_probs=57.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHH-cCCceEEEEecCCCCCcccc--------CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHR-MGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r-~g~~nv~v~~~D~~~l~~~~--------~~ 247 (496)
.|.+||=.|++ ||.+.+++..+. ....|+.++.+...++.+...+.. .+. ++.++..|..+..... ..
T Consensus 19 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITGAT-KGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT-DVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46778877755 667777776553 335899999999999888887766 443 5788889988753211 01
Q ss_pred CCCCEEEECCCCC
Q 011002 248 NTVDRVLLDAPCS 260 (496)
Q Consensus 248 ~~FD~VLlDpPCS 260 (496)
+..|.++.++-..
T Consensus 97 g~id~lv~nAg~~ 109 (266)
T 4egf_A 97 GGLDVLVNNAGIS 109 (266)
T ss_dssp TSCSEEEEECCCC
T ss_pred CCCCEEEECCCcC
Confidence 4799999987543
No 421
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=88.86 E-value=0.37 Score=48.12 Aligned_cols=99 Identities=18% Similarity=0.168 Sum_probs=59.1
Q ss_pred hcCCCCCCeEeecccCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc---CCC
Q 011002 173 ALAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---GLN 248 (496)
Q Consensus 173 ~L~~~~g~~VLDlcAGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~---~~~ 248 (496)
.+.+ +|++||-.|+|+ |..++.+|..++ ...|+++|.++.+++.+++ + .+. ++..+..++.... ...
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~~----l-a~~--v~~~~~~~~~~~~~~~~~~ 230 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASG-AGPILVSDPNPYRLAFARP----Y-ADR--LVNPLEEDLLEVVRRVTGS 230 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHGGGTT----T-CSE--EECTTTSCHHHHHHHHHSS
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----h-HHh--ccCcCccCHHHHHHHhcCC
Confidence 3457 999999999843 344445555543 1379999999998876643 3 332 2333222221111 024
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.||+|+- |+|. ...+..++++| ++||++|...
T Consensus 231 g~D~vid---~~g~-------------------------~~~~~~~~~~l----~~~G~iv~~g 262 (343)
T 2dq4_A 231 GVEVLLE---FSGN-------------------------EAAIHQGLMAL----IPGGEARILG 262 (343)
T ss_dssp CEEEEEE---CSCC-------------------------HHHHHHHHHHE----EEEEEEEECC
T ss_pred CCCEEEE---CCCC-------------------------HHHHHHHHHHH----hcCCEEEEEe
Confidence 6999986 3332 11356677877 9999987643
No 422
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=88.84 E-value=0.9 Score=44.79 Aligned_cols=94 Identities=21% Similarity=0.248 Sum_probs=58.0
Q ss_pred cCCCCCCeEeecc-cCC-cHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCC-CccccCCCCC
Q 011002 174 LAPQEKERVIDMA-AAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNE-LPKVLGLNTV 250 (496)
Q Consensus 174 L~~~~g~~VLDlc-AGp-Ggktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~-l~~~~~~~~F 250 (496)
..+++|++||=.| +|+ |..++.+|..++ ..|++++ +..+++. ++.+|.+. +++.+..+ +.... ..|
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G--a~vi~~~-~~~~~~~----~~~lGa~~--~i~~~~~~~~~~~~--~g~ 216 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQKG--TTVITTA-SKRNHAF----LKALGAEQ--CINYHEEDFLLAIS--TPV 216 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEE-CHHHHHH----HHHHTCSE--EEETTTSCHHHHCC--SCE
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHcC--CEEEEEe-ccchHHH----HHHcCCCE--EEeCCCcchhhhhc--cCC
Confidence 4688999999875 333 555666666654 4788887 5555443 45688864 33333332 32222 579
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 251 D~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
|+||- |+|.. .+..++++| ++||++|..
T Consensus 217 D~v~d---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~ 244 (321)
T 3tqh_A 217 DAVID---LVGGD--------------------------VGIQSIDCL----KETGCIVSV 244 (321)
T ss_dssp EEEEE---SSCHH--------------------------HHHHHGGGE----EEEEEEEEC
T ss_pred CEEEE---CCCcH--------------------------HHHHHHHhc----cCCCEEEEe
Confidence 99875 33321 135667776 999999863
No 423
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.79 E-value=3.4 Score=39.19 Aligned_cols=66 Identities=12% Similarity=0.234 Sum_probs=50.1
Q ss_pred CeEeecccCCcHHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccccCCCCCCEEEECCC
Q 011002 180 ERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAP 258 (496)
Q Consensus 180 ~~VLDlcAGpGgktl~lA~l~~~~-g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~~~~~FD~VLlDpP 258 (496)
.+||=.| + |..+.+++..+... -.|++++.++.....+.. .++.++.+|..++. + ..+|.|+.-+.
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~--~--~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS--L--DGVTHLLISTA 72 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC--C--TTCCEEEECCC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------CCCeEEEecccccc--c--CCCCEEEECCC
Confidence 5799999 5 99999998866443 489999999876654432 34778889988865 3 68999998654
No 424
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=88.51 E-value=3.9 Score=39.78 Aligned_cols=81 Identities=15% Similarity=0.176 Sum_probs=56.9
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCc--eEEEEecCCCCCccc---c-----C
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVT--NTIVCNYDGNELPKV---L-----G 246 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~--nv~v~~~D~~~l~~~---~-----~ 246 (496)
.|.+||=.|+ +||.+..++..+. ....|++++.++..++.+...+...|.. ++.++..|..+.... + .
T Consensus 25 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITGS-SNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 4667886665 5778888777553 3358999999999998888877766542 577888898764321 0 0
Q ss_pred CCCCCEEEECCCC
Q 011002 247 LNTVDRVLLDAPC 259 (496)
Q Consensus 247 ~~~FD~VLlDpPC 259 (496)
.+.+|.|+.++-.
T Consensus 104 ~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 104 FGKIDILVNNAGA 116 (297)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1479999997753
No 425
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=88.50 E-value=2.8 Score=40.33 Aligned_cols=81 Identities=14% Similarity=0.148 Sum_probs=57.6
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.|.+||=.|++ ||.+.+++..+. ....|+.++.+...++.+...+...|. ++.++..|..+..... ..+
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46788877755 677777776553 335899999999999988888887764 4677788987643210 014
Q ss_pred CCCEEEECCCCC
Q 011002 249 TVDRVLLDAPCS 260 (496)
Q Consensus 249 ~FD~VLlDpPCS 260 (496)
.+|.++.++-..
T Consensus 109 ~iD~lvnnAg~~ 120 (276)
T 3r1i_A 109 GIDIAVCNAGIV 120 (276)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 799999977543
No 426
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=88.44 E-value=3.3 Score=39.22 Aligned_cols=121 Identities=12% Similarity=0.151 Sum_probs=72.7
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.|.+||=.|++ ||.+.+++..+. ....|+.+|.++..++.+.+.+ + .++.++..|..+..... ..+
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G-PRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G-GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 46788877754 667777777553 3358999999998887776654 3 35778888987753210 114
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSY----LQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~----lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
.+|.++.++-.+..+.+ ...+.++...... -...++..++..+ +.+|.||+.+..
T Consensus 82 ~id~lv~nAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~----~~~g~iv~isS~ 140 (255)
T 4eso_A 82 AIDLLHINAGVSELEPF-------DQVSEASYDRQFAVNTKGAFFTVQRLTPLI----REGGSIVFTSSV 140 (255)
T ss_dssp SEEEEEECCCCCCCBCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHGGGE----EEEEEEEEECCG
T ss_pred CCCEEEECCCCCCCCCh-------hhCCHHHHHHHHHHhhHHHHHHHHHHHHHH----hcCCEEEEECCh
Confidence 78999997754433322 1223333332221 1223444444443 678998886543
No 427
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=88.29 E-value=5.9 Score=37.67 Aligned_cols=125 Identities=13% Similarity=0.206 Sum_probs=74.9
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeC-CHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDi-s~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~ 247 (496)
.|.+||=.|++ ||.+.+++..+.. ...|+.++. +...++.+.+.+...|. ++.++..|..+..... ..
T Consensus 17 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 17 DGKVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TTCEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46778877755 6777777765533 347777665 57778888888877764 4777888988743210 01
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~----~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl 315 (496)
+..|.++.++-....+.+ ...+.++..... .-...++..++..+ +.+|.||+.+.+.
T Consensus 95 g~id~lvnnAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~----~~~g~iv~isS~~ 155 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHL-------KDVTEEEFDRVFSLNTRGQFFVAREAYRHL----TEGGRIVLTSSNT 155 (270)
T ss_dssp SCCCEEECCCCCCCCCCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHC----CTTCEEEEECCTT
T ss_pred CCCCEEEECCCCCCCCCc-------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHH----hcCCeEEEEeCch
Confidence 478999987654332221 122333332221 22233555566654 7789888876543
No 428
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=88.29 E-value=1.3 Score=44.35 Aligned_cols=98 Identities=15% Similarity=0.124 Sum_probs=58.8
Q ss_pred cCCCCCCeEeecccC--CcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCc----cccCC
Q 011002 174 LAPQEKERVIDMAAA--PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGL 247 (496)
Q Consensus 174 L~~~~g~~VLDlcAG--pGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~----~~~~~ 247 (496)
..+++|++||-.|++ .|..+..++..++ ..|++++.++.+++.+ ..+|...+ +..+-.++. .....
T Consensus 166 ~~~~~g~~vlV~GasggiG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~----~~~ga~~~--~d~~~~~~~~~~~~~~~~ 237 (351)
T 1yb5_A 166 ACVKAGESVLVHGASGGVGLAACQIARAYG--LKILGTAGTEEGQKIV----LQNGAHEV--FNHREVNYIDKIKKYVGE 237 (351)
T ss_dssp SCCCTTCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHH----HHTTCSEE--EETTSTTHHHHHHHHHCT
T ss_pred hCCCCcCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCChhHHHHH----HHcCCCEE--EeCCCchHHHHHHHHcCC
Confidence 357899999999862 2333444444432 4899999999988754 45676532 222222211 11122
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
..+|+|+-.+ |. ..+..++++| ++||++|...
T Consensus 238 ~~~D~vi~~~---G~--------------------------~~~~~~~~~l----~~~G~iv~~g 269 (351)
T 1yb5_A 238 KGIDIIIEML---AN--------------------------VNLSKDLSLL----SHGGRVIVVG 269 (351)
T ss_dssp TCEEEEEESC---HH--------------------------HHHHHHHHHE----EEEEEEEECC
T ss_pred CCcEEEEECC---Ch--------------------------HHHHHHHHhc----cCCCEEEEEe
Confidence 4799998622 10 1245667777 9999988654
No 429
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.24 E-value=2.7 Score=38.84 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=48.8
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHcCCceE-EEEecCCC-CCccccCCCCCCEEE
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNT-IVCNYDGN-ELPKVLGLNTVDRVL 254 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~-g~V~AvDis~~rl~~l~~nl~r~g~~nv-~v~~~D~~-~l~~~~~~~~FD~VL 254 (496)
.|.+||=.| |+|+.+.+++..+... ..|++++.++..+..+.. . ++ .++.+|.. .+...+ ..+|.|+
T Consensus 20 ~~~~ilVtG-atG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~---~~~~~~~~Dl~~~~~~~~--~~~D~vi 89 (236)
T 3e8x_A 20 QGMRVLVVG-ANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R---GASDIVVANLEEDFSHAF--ASIDAVV 89 (236)
T ss_dssp -CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T---TCSEEEECCTTSCCGGGG--TTCSEEE
T ss_pred CCCeEEEEC-CCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C---CCceEEEcccHHHHHHHH--cCCCEEE
Confidence 477888666 5688888888765433 489999999887765433 2 35 67778875 233334 5799999
Q ss_pred ECCC
Q 011002 255 LDAP 258 (496)
Q Consensus 255 lDpP 258 (496)
..+.
T Consensus 90 ~~ag 93 (236)
T 3e8x_A 90 FAAG 93 (236)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 8765
No 430
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=88.10 E-value=5.5 Score=38.09 Aligned_cols=80 Identities=11% Similarity=0.022 Sum_probs=58.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCc--eEEEEecCCCCCcccc--------C
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVT--NTIVCNYDGNELPKVL--------G 246 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~--nv~v~~~D~~~l~~~~--------~ 246 (496)
.|.+||=.|+ +||.+.+++..+. ....|+.+|.++..++.+.+.+...+.. .+.++..|..+..... .
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGG-GSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4677887775 5677877777543 3458999999999999998888877653 5788889988643210 0
Q ss_pred CCCCCEEEECCC
Q 011002 247 LNTVDRVLLDAP 258 (496)
Q Consensus 247 ~~~FD~VLlDpP 258 (496)
.+.+|.++.++-
T Consensus 89 ~g~id~lv~nAg 100 (281)
T 3svt_A 89 HGRLHGVVHCAG 100 (281)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 147899999775
No 431
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=87.98 E-value=0.71 Score=47.82 Aligned_cols=52 Identities=13% Similarity=0.071 Sum_probs=36.3
Q ss_pred cCCCCCCeEeeccc-C-CcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceE
Q 011002 174 LAPQEKERVIDMAA-A-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNT 231 (496)
Q Consensus 174 L~~~~g~~VLDlcA-G-pGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv 231 (496)
..+++|++||=.|| | .|..++.++..++ ..|++++.++.+++.++ .+|...+
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~G--a~vi~~~~~~~~~~~~~----~lGa~~~ 269 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGG--GIPVAVVSSAQKEAAVR----ALGCDLV 269 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HTTCCCE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH----hcCCCEE
Confidence 45789999998886 2 2444455555543 48899999999988763 5787643
No 432
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=87.97 E-value=2.6 Score=39.87 Aligned_cols=82 Identities=13% Similarity=0.159 Sum_probs=58.1
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc-------CCCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL-------GLNT 249 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~-------~~~~ 249 (496)
.|.+||=.|++ ||.+..++..+. .+..|+.+|.+...++.+...+...|. ++.++..|..+..... ..+.
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 36677766655 667777776553 334899999999999999988887764 5788889987743211 0147
Q ss_pred CCEEEECCCCCC
Q 011002 250 VDRVLLDAPCSG 261 (496)
Q Consensus 250 FD~VLlDpPCSg 261 (496)
+|.++.++-...
T Consensus 84 id~lv~nAg~~~ 95 (252)
T 3h7a_A 84 LEVTIFNVGANV 95 (252)
T ss_dssp EEEEEECCCCCC
T ss_pred ceEEEECCCcCC
Confidence 899999775433
No 433
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.96 E-value=4.4 Score=38.43 Aligned_cols=78 Identities=15% Similarity=0.138 Sum_probs=56.5
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.|.+||=.|++ ||.+.+++..+. ....|+.+|.+...++.+...+...|. ++.++..|..+..... ..+
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 10 TDKVVVISGVG-PALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTCEEEEESCC-TTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCcEEEEECCC-cHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46788877765 567777766543 335899999999999999888887764 4778888988743210 125
Q ss_pred CCCEEEECC
Q 011002 249 TVDRVLLDA 257 (496)
Q Consensus 249 ~FD~VLlDp 257 (496)
..|.++.++
T Consensus 88 ~id~lv~nA 96 (264)
T 3ucx_A 88 RVDVVINNA 96 (264)
T ss_dssp CCSEEEECC
T ss_pred CCcEEEECC
Confidence 799999977
No 434
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=87.94 E-value=2.1 Score=39.90 Aligned_cols=79 Identities=14% Similarity=0.130 Sum_probs=54.7
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCC-HHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMK-ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis-~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~ 247 (496)
.|.+||=.|+ +|+.+.+++..+.. ...|++++.+ +..++.+...+...+. ++.++..|..+.... + ..
T Consensus 6 ~~k~vlVTGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 6 KGKRVLITGS-SQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG-DAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3667886664 68888888875543 3489999998 7777777777766553 577888998764321 1 01
Q ss_pred CCCCEEEECCC
Q 011002 248 NTVDRVLLDAP 258 (496)
Q Consensus 248 ~~FD~VLlDpP 258 (496)
+.+|.|+.++-
T Consensus 84 g~id~vi~~Ag 94 (258)
T 3afn_B 84 GGIDVLINNAG 94 (258)
T ss_dssp SSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 37999999775
No 435
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=87.89 E-value=0.29 Score=49.09 Aligned_cols=96 Identities=17% Similarity=0.203 Sum_probs=52.6
Q ss_pred cCCCCCCeEeecccCCcHHHHHHHHHcCC--CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---cCCC
Q 011002 174 LAPQEKERVIDMAAAPGGKTTYIAALMKN--TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDlcAGpGgktl~lA~l~~~--~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~~~~ 248 (496)
..+++|++||=.||+ |+.++.+.++... ...|++.+ +..+.+.++ +|.+.+. ..+ .++... ....
T Consensus 138 ~~~~~g~~VlV~Ga~-G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~~~~--~~~-~~~~~~~~~~~~~ 207 (349)
T 4a27_A 138 ANLREGMSVLVHSAG-GGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVTHLF--DRN-ADYVQEVKRISAE 207 (349)
T ss_dssp SCCCTTCEEEESSTT-SHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSSEEE--ETT-SCHHHHHHHHCTT
T ss_pred cCCCCCCEEEEEcCC-cHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCcEEE--cCC-ccHHHHHHHhcCC
Confidence 357899999988874 4444444444332 24888888 555554432 6765432 222 222110 1235
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYST 312 (496)
.||+||- |+|.. .+..++++| ++||++|...
T Consensus 208 g~Dvv~d---~~g~~--------------------------~~~~~~~~l----~~~G~~v~~G 238 (349)
T 4a27_A 208 GVDIVLD---CLCGD--------------------------NTGKGLSLL----KPLGTYILYG 238 (349)
T ss_dssp CEEEEEE---ECC---------------------------------CTTE----EEEEEEEEEC
T ss_pred CceEEEE---CCCch--------------------------hHHHHHHHh----hcCCEEEEEC
Confidence 7999885 44421 134566666 9999998654
No 436
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=87.85 E-value=3.7 Score=39.05 Aligned_cols=81 Identities=17% Similarity=0.141 Sum_probs=53.4
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCC--ceEEEEecCCCCCccc---c-----C
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGV--TNTIVCNYDGNELPKV---L-----G 246 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~--~nv~v~~~D~~~l~~~---~-----~ 246 (496)
.+.+||=.|+ +||.+.+++..+. ....|++++.++..++.+.+.+...+. .++.++..|..+.... + .
T Consensus 5 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 5 AEKVAIITGS-SNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 3567776665 4778888777553 335899999999988877766633221 3477888898764211 1 0
Q ss_pred CCCCCEEEECCCC
Q 011002 247 LNTVDRVLLDAPC 259 (496)
Q Consensus 247 ~~~FD~VLlDpPC 259 (496)
.+.+|.|+.++-.
T Consensus 84 ~g~id~lv~~Ag~ 96 (278)
T 1spx_A 84 FGKLDILVNNAGA 96 (278)
T ss_dssp HSCCCEEEECCC-
T ss_pred cCCCCEEEECCCC
Confidence 1479999997743
No 437
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=87.75 E-value=14 Score=35.10 Aligned_cols=80 Identities=15% Similarity=0.140 Sum_probs=56.9
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCCccc---c-----CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~-~nv~v~~~D~~~l~~~---~-----~~ 247 (496)
.+.+||=.| |+|+.+.+++..+. ....|++++.++..++.+...+...|. ..+.++..|..+.... + ..
T Consensus 31 ~~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 366777666 55788888877553 334899999999999888888887775 3577888898764321 0 01
Q ss_pred CCCCEEEECCC
Q 011002 248 NTVDRVLLDAP 258 (496)
Q Consensus 248 ~~FD~VLlDpP 258 (496)
+.+|.|+.++-
T Consensus 110 g~iD~vi~~Ag 120 (279)
T 1xg5_A 110 SGVDICINNAG 120 (279)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999998764
No 438
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=87.75 E-value=8.4 Score=36.59 Aligned_cols=79 Identities=16% Similarity=0.162 Sum_probs=55.7
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCC------------HHHHHHHHHHHHHcCCceEEEEecCCCCCccc
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK------------ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV 244 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis------------~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~ 244 (496)
.|.+||=.|+ +||.+.+++..+. ....|+++|.+ ...++.+...+...|. ++.++..|..+....
T Consensus 12 ~gk~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 12 TGKVAFITGA-ARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRDRESL 89 (278)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHH
Confidence 4677887775 5677777776553 33589999987 7888888877777764 578888998864321
Q ss_pred ---c-----CCCCCCEEEECCC
Q 011002 245 ---L-----GLNTVDRVLLDAP 258 (496)
Q Consensus 245 ---~-----~~~~FD~VLlDpP 258 (496)
+ ..+..|.++.++-
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCC
Confidence 0 0147999999774
No 439
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=87.72 E-value=2.5 Score=41.67 Aligned_cols=81 Identities=15% Similarity=0.167 Sum_probs=56.3
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCC----------HHHHHHHHHHHHHcCCceEEEEecCCCCCcccc-
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK----------ASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL- 245 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis----------~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~- 245 (496)
.|.+||=.|++ ||.+..++..+. ....|+.+|.+ ...++.+...+...|. ++.++..|..+.....
T Consensus 26 ~gk~vlVTGas-~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 26 DGRVVIVTGAG-GGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG-EAVADGSNVADWDQAAG 103 (322)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTC-EEEEECCCTTSHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHH
Confidence 47788877755 777877777553 33589999987 7778888888877764 5778888987743210
Q ss_pred -------CCCCCCEEEECCCCC
Q 011002 246 -------GLNTVDRVLLDAPCS 260 (496)
Q Consensus 246 -------~~~~FD~VLlDpPCS 260 (496)
..+.+|.++.++-..
T Consensus 104 ~~~~~~~~~g~iD~lv~nAg~~ 125 (322)
T 3qlj_A 104 LIQTAVETFGGLDVLVNNAGIV 125 (322)
T ss_dssp HHHHHHHHHSCCCEEECCCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 014799999877543
No 440
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=87.68 E-value=6.6 Score=38.04 Aligned_cols=80 Identities=15% Similarity=0.148 Sum_probs=56.3
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCc----EEEEEeCCHHHHHHHHHHHHHcC-CceEEEEecCCCCCcccc-------
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTG----LIYANEMKASRLKSLTANLHRMG-VTNTIVCNYDGNELPKVL------- 245 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g----~V~AvDis~~rl~~l~~nl~r~g-~~nv~v~~~D~~~l~~~~------- 245 (496)
.|.+||=.|++ ||.+..++..+-..| .|+.++.+...++.+.+.+...+ -.++.++..|..+.....
T Consensus 32 ~~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 32 AKKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred CCCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 46788877754 677777776552222 89999999999998888887653 235788889987653210
Q ss_pred -CCCCCCEEEECCC
Q 011002 246 -GLNTVDRVLLDAP 258 (496)
Q Consensus 246 -~~~~FD~VLlDpP 258 (496)
..+.+|.++.++-
T Consensus 111 ~~~g~iD~lVnnAG 124 (287)
T 3rku_A 111 QEFKDIDILVNNAG 124 (287)
T ss_dssp GGGCSCCEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 1257999999774
No 441
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=87.62 E-value=15 Score=35.24 Aligned_cols=63 Identities=17% Similarity=0.106 Sum_probs=45.7
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEe-CCHHHHHHHHHHHH-HcCCceEEEEecCCCCCc
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANE-MKASRLKSLTANLH-RMGVTNTIVCNYDGNELP 242 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvD-is~~rl~~l~~nl~-r~g~~nv~v~~~D~~~l~ 242 (496)
.|.+||=.|++ ||.+..++..+. ....|+.++ .+...++.+.+.+. ..| .++.++..|..+..
T Consensus 8 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 8 TVPVALVTGAA-KRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA 73 (291)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC-CeeEEEEeecCCcc
Confidence 36677767654 678888877553 335899999 99998888877776 445 35778888887654
No 442
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=87.51 E-value=2.5 Score=39.31 Aligned_cols=80 Identities=19% Similarity=0.222 Sum_probs=52.3
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEE-eCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYAN-EMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~Av-Dis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~ 247 (496)
.+.+||=.|+ +|+.+.+++..+.. ...|+++ +.++..++.+...+...+. ++.++..|..+.... + ..
T Consensus 4 ~~~~vlItGa-sggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 4 KGKTAIVTGS-SRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGI-NVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTC-CEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 3567776664 57888888775543 3478888 6677777777777766553 477888898764321 1 01
Q ss_pred CCCCEEEECCCC
Q 011002 248 NTVDRVLLDAPC 259 (496)
Q Consensus 248 ~~FD~VLlDpPC 259 (496)
+.+|.|+.++-.
T Consensus 82 ~~~d~vi~~Ag~ 93 (247)
T 2hq1_A 82 GRIDILVNNAGI 93 (247)
T ss_dssp SCCCEEEECC--
T ss_pred CCCCEEEECCCC
Confidence 379999997743
No 443
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=87.46 E-value=3.9 Score=39.12 Aligned_cols=81 Identities=15% Similarity=0.141 Sum_probs=56.3
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCc--eEEEEecCCCCCccc---c-----C
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVT--NTIVCNYDGNELPKV---L-----G 246 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~--nv~v~~~D~~~l~~~---~-----~ 246 (496)
.|.+||=.|+ +||.+.+++..+. ....|++++.++..++.+.+.+...|.. ++.++..|..+.... + .
T Consensus 5 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 5 SNKTVIITGS-SNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 4667777775 5677877776553 3348999999999988887777765542 578888998764211 0 0
Q ss_pred CCCCCEEEECCCC
Q 011002 247 LNTVDRVLLDAPC 259 (496)
Q Consensus 247 ~~~FD~VLlDpPC 259 (496)
.+.+|.|+.++-.
T Consensus 84 ~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 84 FGKIDVLVNNAGA 96 (280)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1479999998753
No 444
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=87.45 E-value=2.8 Score=39.60 Aligned_cols=78 Identities=14% Similarity=0.189 Sum_probs=55.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----C-C
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----G-L 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~-~ 247 (496)
.|.+||=.| |+||.+.+++..+.. ...|++++.++..++.+...+...|. ++.++..|..+.... + . .
T Consensus 4 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 4 NGQVCVVTG-ASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGG-QCVPVVCDSSQESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSS-EEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 356777666 557788888775533 34899999999998888777766653 577888898764211 0 0 2
Q ss_pred CCCCEEEECC
Q 011002 248 NTVDRVLLDA 257 (496)
Q Consensus 248 ~~FD~VLlDp 257 (496)
+.+|.++.++
T Consensus 82 g~id~lvnnA 91 (260)
T 2qq5_A 82 GRLDVLVNNA 91 (260)
T ss_dssp TCCCEEEECC
T ss_pred CCceEEEECC
Confidence 6789999977
No 445
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=87.15 E-value=6.4 Score=37.10 Aligned_cols=80 Identities=10% Similarity=0.065 Sum_probs=55.8
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CC-
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL- 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~- 247 (496)
.|.+||=.|+ +|+.+.+++..+. ....|++++.++..++.+...+...|. ++.++..|..+.... + ..
T Consensus 8 ~~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3667886665 6778887776553 334899999999988887777766553 577788898764221 1 01
Q ss_pred CCCCEEEECCCC
Q 011002 248 NTVDRVLLDAPC 259 (496)
Q Consensus 248 ~~FD~VLlDpPC 259 (496)
+.+|.|+.++-.
T Consensus 86 g~id~lv~~Ag~ 97 (260)
T 2ae2_A 86 GKLNILVNNAGI 97 (260)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 579999997743
No 446
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=87.07 E-value=7.7 Score=37.16 Aligned_cols=80 Identities=13% Similarity=0.069 Sum_probs=55.2
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHc-CCceEEEEecCCCCCcccc--------CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRM-GVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~-g~~nv~v~~~D~~~l~~~~--------~~ 247 (496)
.|.+||=.|+ +|+.+.+++..+.. ...|++++.+...++.+...+... + .++.++..|..+..... ..
T Consensus 25 ~~k~vlITGa-sggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 25 QGKVAFITGG-GTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 3667776664 57888888775533 348999999998888777776554 4 35788889987642110 12
Q ss_pred CCCCEEEECCCC
Q 011002 248 NTVDRVLLDAPC 259 (496)
Q Consensus 248 ~~FD~VLlDpPC 259 (496)
+.+|.|+.++-.
T Consensus 103 g~id~li~~Ag~ 114 (302)
T 1w6u_A 103 GHPNIVINNAAG 114 (302)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578999997753
No 447
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=87.07 E-value=2.3 Score=40.29 Aligned_cols=82 Identities=21% Similarity=0.133 Sum_probs=57.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHc--CCceEEEEecCCCCCcccc--------C
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRM--GVTNTIVCNYDGNELPKVL--------G 246 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~--g~~nv~v~~~D~~~l~~~~--------~ 246 (496)
.+.+||=.|++ ||.+..++..+. ....|+.++.+...++.+.+.+... +..++.++..|..+..... .
T Consensus 6 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGAS-QGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTT-SHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 35677766655 667777776543 2358999999999999988888776 3356778889988743210 0
Q ss_pred CCCCCEEEECCCCC
Q 011002 247 LNTVDRVLLDAPCS 260 (496)
Q Consensus 247 ~~~FD~VLlDpPCS 260 (496)
.+..|.++.++--.
T Consensus 85 ~g~iD~lvnnAg~~ 98 (250)
T 3nyw_A 85 YGAVDILVNAAAMF 98 (250)
T ss_dssp HCCEEEEEECCCCC
T ss_pred cCCCCEEEECCCcC
Confidence 15799999977543
No 448
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=87.06 E-value=6.4 Score=38.63 Aligned_cols=84 Identities=18% Similarity=0.179 Sum_probs=56.9
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCC------------HHHHHHHHHHHHHcCCceEEEEecCCCCCccc
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK------------ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV 244 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis------------~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~ 244 (496)
.|.+||=.|++ ||.+..++..+. ....|+++|.+ ...++.+...+...|. .+.++..|..+....
T Consensus 45 ~gk~~lVTGas-~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 45 QGKVAFITGAA-RGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR-RIIARQADVRDLASL 122 (317)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHH
Confidence 46778877755 667777776553 34589999886 7788877777777664 477888898764321
Q ss_pred c--------CCCCCCEEEECCCCCCCC
Q 011002 245 L--------GLNTVDRVLLDAPCSGTG 263 (496)
Q Consensus 245 ~--------~~~~FD~VLlDpPCSg~G 263 (496)
. ..+.+|.++.++-.+..+
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~ 149 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGISNQG 149 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCB
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 0 014799999987544433
No 449
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=86.91 E-value=7.5 Score=37.19 Aligned_cols=124 Identities=13% Similarity=0.160 Sum_probs=74.5
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeC-CHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDi-s~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~ 247 (496)
.|.+||=.|++ ||.+..++..+.. ...|+.++. +..+++.+...+...|. .+.++..|..+.... + ..
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTGGS-RGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788877765 6777777765533 347777754 56778888888877764 477788898764321 0 11
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~----~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
+..|.++.++-....+.+ ...+.++..... .-...++..++..+ +.+|.||+.+.+
T Consensus 108 g~iD~lvnnAg~~~~~~~-------~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m----~~~g~iv~isS~ 167 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPL-------EETTVADFDEVMAVNFRAPFVAIRSASRHL----GDGGRIITIGSN 167 (271)
T ss_dssp SCCCEEEECCCCCCCCCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHC----CTTCEEEEECCG
T ss_pred CCCcEEEECCCCCCCCCh-------hhCCHHHHHHHHHHHhHHHHHHHHHHHHHH----hcCCEEEEEeCh
Confidence 479999997743332221 122333332221 12233455555554 778998887654
No 450
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=86.88 E-value=6.9 Score=36.77 Aligned_cols=79 Identities=15% Similarity=0.185 Sum_probs=54.2
Q ss_pred CCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCCC
Q 011002 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLNT 249 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~~ 249 (496)
+.+||=.| |+||.+.+++..+.. ...|++++.++..++.+.+.+...|. ++.++..|..+.... + ..+.
T Consensus 2 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTG-AGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 34566555 457788888775533 34899999999988888777776653 477788898764221 1 1147
Q ss_pred CCEEEECCCC
Q 011002 250 VDRVLLDAPC 259 (496)
Q Consensus 250 FD~VLlDpPC 259 (496)
+|.|+.++-.
T Consensus 80 id~lv~nAg~ 89 (256)
T 1geg_A 80 FDVIVNNAGV 89 (256)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999997743
No 451
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=86.84 E-value=5.1 Score=37.71 Aligned_cols=81 Identities=11% Similarity=0.044 Sum_probs=56.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC--CCCccc---c-----C
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPKV---L-----G 246 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~--~~l~~~---~-----~ 246 (496)
.|.+||=.|+ +||.+..++..+. ....|+.+|.+...++.+...+...+...+.++..|. .+.... . .
T Consensus 11 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 11 NDRIILVTGA-SDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 4677887775 4677777776543 3458999999999999888888776554567777887 442110 0 1
Q ss_pred CCCCCEEEECCCC
Q 011002 247 LNTVDRVLLDAPC 259 (496)
Q Consensus 247 ~~~FD~VLlDpPC 259 (496)
.+.+|.++.++-.
T Consensus 90 ~g~id~lv~nAg~ 102 (252)
T 3f1l_A 90 YPRLDGVLHNAGL 102 (252)
T ss_dssp CSCCSEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 2579999997753
No 452
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=86.81 E-value=5.7 Score=37.96 Aligned_cols=81 Identities=15% Similarity=0.115 Sum_probs=56.4
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeC-------------CHHHHHHHHHHHHHcCCceEEEEecCCCCCcc
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-------------KASRLKSLTANLHRMGVTNTIVCNYDGNELPK 243 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDi-------------s~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~ 243 (496)
.|.+||=.|++ ||.+.+++..+. ....|+++|. +...++.+...+...|. ++.++..|..+...
T Consensus 14 ~gk~~lVTGas-~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 14 QGRVAFITGAA-RGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLDVRDDAA 91 (280)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHH
Confidence 47778877765 667777776553 3358999998 78888888888877764 47778889876422
Q ss_pred cc--------CCCCCCEEEECCCCC
Q 011002 244 VL--------GLNTVDRVLLDAPCS 260 (496)
Q Consensus 244 ~~--------~~~~FD~VLlDpPCS 260 (496)
.. ..+..|.++.++-..
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~ 116 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVL 116 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 10 014799999977543
No 453
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=86.66 E-value=3.6 Score=39.52 Aligned_cols=79 Identities=13% Similarity=0.077 Sum_probs=49.3
Q ss_pred CCCeEeecccCC-cHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CC
Q 011002 178 EKERVIDMAAAP-GGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGp-Ggktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~ 247 (496)
.|.+||=.|+++ ||.+.+++..+. ....|++++.+...-+.+.+.....| ++.++..|..+.... + ..
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLEENW 97 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467899888874 888888887553 33589999988752222222222233 356777888764211 0 12
Q ss_pred CCCCEEEECCC
Q 011002 248 NTVDRVLLDAP 258 (496)
Q Consensus 248 ~~FD~VLlDpP 258 (496)
+.+|.|+.++-
T Consensus 98 g~iD~lv~~Ag 108 (285)
T 2p91_A 98 GSLDIIVHSIA 108 (285)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899999774
No 454
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=86.61 E-value=7.5 Score=36.23 Aligned_cols=120 Identities=15% Similarity=0.058 Sum_probs=68.5
Q ss_pred CCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCCC
Q 011002 179 KERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLNT 249 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~~ 249 (496)
+.+||=.|+ +||.+..++..+. ....|++++.+...++.+...+ +. ++.++..|..+..... ..+.
T Consensus 3 ~k~vlVTGa-s~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 77 (235)
T 3l6e_A 3 LGHIIVTGA-GSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GN-AVIGIVADLAHHEDVDVAFAAAVEWGGL 77 (235)
T ss_dssp CCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GG-GEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cC-CceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 456776665 4677877776553 3358999999999888777666 22 4788889987642210 0147
Q ss_pred CCEEEECCCCCCCCcccCCchhhccCCHHHHHHH----HHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 011002 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 250 FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l----~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTC 313 (496)
.|.++.++-....+-+ ...+.++.... ..-...++..++..+ .+.+|.||+.+.
T Consensus 78 id~lvnnAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~~~~iv~isS 135 (235)
T 3l6e_A 78 PELVLHCAGTGEFGPV-------GVYTAEQIRRVMESNLVSTILVAQQTVRLI---GERGGVLANVLS 135 (235)
T ss_dssp CSEEEEECCCC-------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEECC
T ss_pred CcEEEECCCCCCCCCh-------HhCCHHHHHHHHHHHhHHHHHHHHHHHHHH---HHcCCEEEEEeC
Confidence 8999997753322211 11233332221 122233455555554 255677776543
No 455
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=86.54 E-value=4.9 Score=37.07 Aligned_cols=79 Identities=18% Similarity=0.166 Sum_probs=54.4
Q ss_pred CCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHH-HcCCceEEEEecCCCCCccc---cC-----CC
Q 011002 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLH-RMGVTNTIVCNYDGNELPKV---LG-----LN 248 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~-r~g~~nv~v~~~D~~~l~~~---~~-----~~ 248 (496)
+.+||=.| |+||.+.+++..+.. ...|+.++.+...++.+...+. ..| .++.++..|..+.... .. .+
T Consensus 2 ~k~vlITG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITG-ASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 45666566 457788888776543 3489999999999988887775 444 3578888898764221 10 14
Q ss_pred CCCEEEECCCC
Q 011002 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~FD~VLlDpPC 259 (496)
.+|.++.++-.
T Consensus 80 ~id~li~~Ag~ 90 (235)
T 3l77_A 80 DVDVVVANAGL 90 (235)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 79999997743
No 456
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=86.53 E-value=6.4 Score=38.17 Aligned_cols=80 Identities=20% Similarity=0.196 Sum_probs=55.9
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCC------------HHHHHHHHHHHHHcCCceEEEEecCCCCCccc
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK------------ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV 244 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis------------~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~ 244 (496)
.|.+||=.|++ ||.+..++..+. ....|+++|.+ ...++.+...+...|. ++.++..|..+....
T Consensus 27 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 27 EGKVAFITGAA-RGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-RIIASQVDVRDFDAM 104 (299)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHH
Confidence 46778877765 567777776543 34589999987 7888888888877764 578888998874321
Q ss_pred c--------CCCCCCEEEECCCC
Q 011002 245 L--------GLNTVDRVLLDAPC 259 (496)
Q Consensus 245 ~--------~~~~FD~VLlDpPC 259 (496)
. ..+..|.++.++--
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCC
Confidence 0 11579999987743
No 457
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=86.43 E-value=4.3 Score=38.94 Aligned_cols=80 Identities=14% Similarity=0.147 Sum_probs=57.6
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.|.+||=.|+ +||.+.+++..+. ....|+.+|.+...++.+.+.+...|. ++.++..|..+..... ..+
T Consensus 25 ~gk~~lVTGa-s~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 25 GGRTALVTGS-SRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 4677887774 5677877777553 335899999999999998888887764 4778888987643210 125
Q ss_pred CCCEEEECCCC
Q 011002 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~FD~VLlDpPC 259 (496)
..|.++.++-.
T Consensus 103 ~iD~lv~nAg~ 113 (271)
T 4ibo_A 103 DVDILVNNAGI 113 (271)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999997753
No 458
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=86.36 E-value=7.9 Score=36.15 Aligned_cols=80 Identities=16% Similarity=0.183 Sum_probs=55.1
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeC-CHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDi-s~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~ 247 (496)
.+.+||=.|+ +|+.+.+++..+. ....|++++. +...++.+.+.+...+. ++.++..|..+.... + ..
T Consensus 6 ~~k~vlITGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 6 EGKVVVITGS-STGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3667886664 5778888877543 3358999999 88888887777776553 577888898764221 1 01
Q ss_pred CCCCEEEECCCC
Q 011002 248 NTVDRVLLDAPC 259 (496)
Q Consensus 248 ~~FD~VLlDpPC 259 (496)
+.+|.|+.++-.
T Consensus 84 g~id~li~~Ag~ 95 (261)
T 1gee_A 84 GKLDVMINNAGL 95 (261)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999997753
No 459
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=86.29 E-value=3.6 Score=37.91 Aligned_cols=75 Identities=19% Similarity=0.132 Sum_probs=49.0
Q ss_pred CCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCCC
Q 011002 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLNT 249 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~~ 249 (496)
+.+||=.| |+|+.+.+++..+.. ...|++++.++..++.+...+ + ++.++..|..+.... + ..+.
T Consensus 5 ~k~vlVtG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 2ehd_A 5 KGAVLITG-ASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL---E--GALPLPGDVREEGDWARAVAAMEEAFGE 78 (234)
T ss_dssp CCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---T--TCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---h--hceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 45677555 568888888875543 348999999988776655433 2 566778888764211 0 0147
Q ss_pred CCEEEECCCC
Q 011002 250 VDRVLLDAPC 259 (496)
Q Consensus 250 FD~VLlDpPC 259 (496)
+|.|+..+-.
T Consensus 79 id~li~~Ag~ 88 (234)
T 2ehd_A 79 LSALVNNAGV 88 (234)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8999987643
No 460
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=86.26 E-value=5.3 Score=38.23 Aligned_cols=82 Identities=13% Similarity=0.179 Sum_probs=57.3
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~ 248 (496)
.|.+||=.| |+||.+..++..+. ....|++++.+...++.+...+...|.. +.++..|..+.... . ..+
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 27 DKQVAIVTG-ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE-GRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCC-CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 467788666 45677777776543 3358999999999999998888877753 56677888764211 0 114
Q ss_pred CCCEEEECCCCCC
Q 011002 249 TVDRVLLDAPCSG 261 (496)
Q Consensus 249 ~FD~VLlDpPCSg 261 (496)
..|.++.++-...
T Consensus 105 ~iD~lvnnAg~~~ 117 (270)
T 3ftp_A 105 ALNVLVNNAGITQ 117 (270)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 7999999875433
No 461
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=86.23 E-value=16 Score=36.00 Aligned_cols=63 Identities=16% Similarity=0.095 Sum_probs=45.7
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEe-CCHHHHHHHHHHHH-HcCCceEEEEecCCCCCc
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANE-MKASRLKSLTANLH-RMGVTNTIVCNYDGNELP 242 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvD-is~~rl~~l~~nl~-r~g~~nv~v~~~D~~~l~ 242 (496)
.|.+||=.|+ +||.+..++..+. ....|+.++ .+...++.+...+. ..| .++.++..|..+..
T Consensus 45 ~~k~~lVTGa-s~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 45 TVPVALVTGA-AKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA 110 (328)
T ss_dssp CCCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC-CeEEEEEeeCCCch
Confidence 3667776665 5778888877553 335899999 99998888877776 445 35778888987654
No 462
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=86.04 E-value=6.4 Score=37.68 Aligned_cols=80 Identities=15% Similarity=0.122 Sum_probs=54.9
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCC----------------HHHHHHHHHHHHHcCCceEEEEecCCCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK----------------ASRLKSLTANLHRMGVTNTIVCNYDGNE 240 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis----------------~~rl~~l~~nl~r~g~~nv~v~~~D~~~ 240 (496)
.|.+||=.|++ ||.+..++..+. ....|+++|.+ ...++.+...+...+. ++.++..|..+
T Consensus 10 ~~k~~lVTGas-~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 87 (286)
T 3uve_A 10 EGKVAFVTGAA-RGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR-RIVTAEVDVRD 87 (286)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC-ceEEEEcCCCC
Confidence 46778877765 567777776553 34589999987 7788877777766654 57788889886
Q ss_pred Ccccc--------CCCCCCEEEECCCC
Q 011002 241 LPKVL--------GLNTVDRVLLDAPC 259 (496)
Q Consensus 241 l~~~~--------~~~~FD~VLlDpPC 259 (496)
..... ..+..|.++.++-.
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 43210 01479999997743
No 463
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=86.01 E-value=5.5 Score=37.58 Aligned_cols=79 Identities=10% Similarity=0.151 Sum_probs=55.6
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.|.+||=.|+ +||.+.+++..+. ....|+.+|.+...++.+...+...+. ++.++..|..+..... ..+
T Consensus 5 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 5 KEKVVIITGG-SSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG-QILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTT-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3667776665 4677887777553 335899999999999888887766553 5778888987642210 014
Q ss_pred CCCEEEECCC
Q 011002 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~FD~VLlDpP 258 (496)
..|.++.++-
T Consensus 83 ~id~lv~nAg 92 (257)
T 3imf_A 83 RIDILINNAA 92 (257)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899999764
No 464
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=85.52 E-value=5.8 Score=37.68 Aligned_cols=81 Identities=11% Similarity=0.124 Sum_probs=53.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCC-cEEEEEe-CCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANE-MKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~-g~V~AvD-is~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~ 247 (496)
.+.+||=.|+ +||.+.+++..+... ..|+.++ .+...+..+...+...+. ++.++..|..+..... ..
T Consensus 24 ~~k~vlITGa-s~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 24 AKRVAFVTGG-MGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGR-DFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp CCCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTC-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3567776664 577888887765443 4788888 667777666666655543 5778888987743210 01
Q ss_pred CCCCEEEECCCCC
Q 011002 248 NTVDRVLLDAPCS 260 (496)
Q Consensus 248 ~~FD~VLlDpPCS 260 (496)
+.+|.|+.++-..
T Consensus 102 g~id~li~nAg~~ 114 (269)
T 3gk3_A 102 GKVDVLINNAGIT 114 (269)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4799999977543
No 465
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=85.50 E-value=7.2 Score=37.12 Aligned_cols=80 Identities=10% Similarity=0.042 Sum_probs=56.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CC-
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL- 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~- 247 (496)
.|.+||=.|+ +||.+.+++..+. ....|++++.++..++.+.+.+...|. ++.++..|..+.... + ..
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4677887775 5778887777553 334899999999988887777766654 477788898764321 0 01
Q ss_pred CCCCEEEECCCC
Q 011002 248 NTVDRVLLDAPC 259 (496)
Q Consensus 248 ~~FD~VLlDpPC 259 (496)
+.+|.++.++-.
T Consensus 98 g~id~lv~nAg~ 109 (273)
T 1ae1_A 98 GKLNILVNNAGV 109 (273)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 579999997753
No 466
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=85.50 E-value=0.77 Score=45.94 Aligned_cols=99 Identities=13% Similarity=0.095 Sum_probs=58.9
Q ss_pred cCCCCC--CeEeecccCCcHHHHHHHHHcCC-Cc-EEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---cC
Q 011002 174 LAPQEK--ERVIDMAAAPGGKTTYIAALMKN-TG-LIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LG 246 (496)
Q Consensus 174 L~~~~g--~~VLDlcAGpGgktl~lA~l~~~-~g-~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~~ 246 (496)
..+++| ++||-.||+ |+.+..+++++.. .. .|+++|.++.+++.+.+ .+|... ++..+-..+... ..
T Consensus 154 ~~~~~g~~~~vlI~Gas-ggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~---~~g~~~--~~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 154 GHITAGSNKTMVVSGAA-GACGSVAGQIGHFLGCSRVVGICGTHEKCILLTS---ELGFDA--AINYKKDNVAEQLRESC 227 (357)
T ss_dssp SCCCTTSCCEEEESSTT-BHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH---TSCCSE--EEETTTSCHHHHHHHHC
T ss_pred cCCCCCCccEEEEECCC-cHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH---HcCCce--EEecCchHHHHHHHHhc
Confidence 457889 999999873 4454444443321 23 89999999988876643 257643 223221221110 11
Q ss_pred CCCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 247 ~~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
.+.+|+|+-.+ |. ..+..++++| ++||++|..
T Consensus 228 ~~~~d~vi~~~---G~--------------------------~~~~~~~~~l----~~~G~iv~~ 259 (357)
T 2zb4_A 228 PAGVDVYFDNV---GG--------------------------NISDTVISQM----NENSHIILC 259 (357)
T ss_dssp TTCEEEEEESC---CH--------------------------HHHHHHHHTE----EEEEEEEEC
T ss_pred CCCCCEEEECC---CH--------------------------HHHHHHHHHh----ccCcEEEEE
Confidence 13699998632 21 1356777877 999998864
No 467
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=85.45 E-value=3.8 Score=38.03 Aligned_cols=79 Identities=16% Similarity=0.167 Sum_probs=52.3
Q ss_pred CCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHH-HHcCCceEEEEecCCCCCccc---c-----CCC
Q 011002 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANL-HRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl-~r~g~~nv~v~~~D~~~l~~~---~-----~~~ 248 (496)
+.+||=.| |+|+.+.+++..+.. ...|++++.++..++.+...+ ...+ .++.++..|..+.... + ..+
T Consensus 2 ~k~vlItG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 2 SRVAIVTG-ASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG-GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 34667666 457888888775533 348999999998887776655 3333 3477888898764321 1 013
Q ss_pred CCCEEEECCCC
Q 011002 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~FD~VLlDpPC 259 (496)
.+|.|+.++-.
T Consensus 80 ~id~li~~Ag~ 90 (250)
T 2cfc_A 80 AIDVLVNNAGI 90 (250)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999997743
No 468
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=85.38 E-value=9 Score=36.58 Aligned_cols=80 Identities=13% Similarity=0.076 Sum_probs=55.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~ 248 (496)
.|.+||=.|+ +||.+..++..+.. ...|+.++.+...+..+...+....-.++.++..|..+.... . ..+
T Consensus 26 ~~k~~lVTGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 26 RDKVAFITGG-GSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4677887775 46788888776543 348999999998888777766543223578888998764211 0 114
Q ss_pred CCCEEEECCC
Q 011002 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~FD~VLlDpP 258 (496)
.+|.++.++-
T Consensus 105 ~id~lv~nAg 114 (277)
T 4fc7_A 105 RIDILINCAA 114 (277)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 7999999774
No 469
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=85.32 E-value=1.4 Score=44.01 Aligned_cols=94 Identities=20% Similarity=0.182 Sum_probs=58.5
Q ss_pred cCCCCCCeEeeccc-C-CcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc----ccCC
Q 011002 174 LAPQEKERVIDMAA-A-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGL 247 (496)
Q Consensus 174 L~~~~g~~VLDlcA-G-pGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~----~~~~ 247 (496)
..+++|++||-.|| | .|..++.++..++ ..|+++ .++.+++.+ ..+|... +. +..++.. ....
T Consensus 146 ~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~G--a~Vi~~-~~~~~~~~~----~~lGa~~---i~-~~~~~~~~~~~~~~~ 214 (343)
T 3gaz_A 146 AQVQDGQTVLIQGGGGGVGHVAIQIALARG--ARVFAT-ARGSDLEYV----RDLGATP---ID-ASREPEDYAAEHTAG 214 (343)
T ss_dssp TCCCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEE-ECHHHHHHH----HHHTSEE---EE-TTSCHHHHHHHHHTT
T ss_pred cCCCCCCEEEEecCCCHHHHHHHHHHHHCC--CEEEEE-eCHHHHHHH----HHcCCCE---ec-cCCCHHHHHHHHhcC
Confidence 35789999999984 3 3555556666553 489999 888887665 4467754 22 2222211 1122
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
..||+|+- |+|.. .+..++++| ++||++|..
T Consensus 215 ~g~D~vid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~ 245 (343)
T 3gaz_A 215 QGFDLVYD---TLGGP--------------------------VLDASFSAV----KRFGHVVSC 245 (343)
T ss_dssp SCEEEEEE---SSCTH--------------------------HHHHHHHHE----EEEEEEEES
T ss_pred CCceEEEE---CCCcH--------------------------HHHHHHHHH----hcCCeEEEE
Confidence 47998875 44321 256677776 999998753
No 470
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=85.24 E-value=7.8 Score=37.14 Aligned_cols=82 Identities=12% Similarity=0.121 Sum_probs=56.8
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.+.+||=.|++ ||.+.+++..+. ....|++++.+...++.+.+.+...|. ++.++..|..+..... ..+
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46678877754 677777776543 335899999999999988888877664 4778888987643210 114
Q ss_pred CCCEEEECCCCCC
Q 011002 249 TVDRVLLDAPCSG 261 (496)
Q Consensus 249 ~FD~VLlDpPCSg 261 (496)
..|.++.++-...
T Consensus 101 ~id~lv~nAg~~~ 113 (279)
T 3sju_A 101 PIGILVNSAGRNG 113 (279)
T ss_dssp SCCEEEECCCCCC
T ss_pred CCcEEEECCCCCC
Confidence 7899999875443
No 471
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=85.23 E-value=5.3 Score=36.85 Aligned_cols=119 Identities=16% Similarity=0.102 Sum_probs=66.1
Q ss_pred eEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c--CCCCCCEEE
Q 011002 181 RVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L--GLNTVDRVL 254 (496)
Q Consensus 181 ~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~--~~~~FD~VL 254 (496)
+||=.|+ +||.+..++..+. .+..|+.++.++..++.+...+ + .++.++..|..+.... + -...+|.|+
T Consensus 3 ~vlVTGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv 77 (230)
T 3guy_A 3 LIVITGA-SSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---S-NNVGYRARDLASHQEVEQLFEQLDSIPSTVV 77 (230)
T ss_dssp CEEEEST-TSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---S-SCCCEEECCTTCHHHHHHHHHSCSSCCSEEE
T ss_pred EEEEecC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---h-hccCeEeecCCCHHHHHHHHHHHhhcCCEEE
Confidence 3555554 5778887777553 3347999999998887665544 2 3466777888764211 0 114569999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHH----HHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 255 LDAPCSGTGVISKDESVKTSKSLEDIQK----CSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 255 lDpPCSg~Gvi~r~p~i~~~~s~~~i~~----l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
.++-....+.+ ...+.+++.. ...-...++..++..+ .+.+|.||+.+.+
T Consensus 78 ~~Ag~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~~~~iv~isS~ 131 (230)
T 3guy_A 78 HSAGSGYFGLL-------QEQDPEQIQTLIENNLSSAINVLRELVKRY---KDQPVNVVMIMST 131 (230)
T ss_dssp ECCCCCCCSCG-------GGSCHHHHHHHHHHHHHHHHHHHHHHHHHH---TTSCCEEEEECCG
T ss_pred EeCCcCCCCcc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCCeEEEEeec
Confidence 87643322221 1223333322 2222334556666655 2446677765543
No 472
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=85.12 E-value=7.1 Score=37.82 Aligned_cols=79 Identities=15% Similarity=0.116 Sum_probs=55.3
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~ 248 (496)
.|.+||=.|+ +||.+..++..+. ....|++++.++..++.+...+...|. ++.++..|..+.... + ..+
T Consensus 33 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (291)
T 3cxt_A 33 KGKIALVTGA-SYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGI-NAHGYVCDVTDEDGIQAMVAQIESEVG 110 (291)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4677886765 5778888777553 335899999999988888777776653 466778888764211 0 125
Q ss_pred CCCEEEECCC
Q 011002 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~FD~VLlDpP 258 (496)
.+|.|+.++-
T Consensus 111 ~iD~lvnnAg 120 (291)
T 3cxt_A 111 IIDILVNNAG 120 (291)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEECCC
Confidence 6999999774
No 473
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=84.91 E-value=11 Score=38.24 Aligned_cols=81 Identities=9% Similarity=0.056 Sum_probs=57.8
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCCc--EEEEEeCCHHHHHHHHHHHHHcCC---ceEEEEecCCCCCcc---ccCCCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNTG--LIYANEMKASRLKSLTANLHRMGV---TNTIVCNYDGNELPK---VLGLNT 249 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~g--~V~AvDis~~rl~~l~~nl~r~g~---~nv~v~~~D~~~l~~---~~~~~~ 249 (496)
.+.+||=.| |+|+.+.+++..+...| .|+++|.++..+..+...+..... .++.++.+|..+... .+....
T Consensus 34 ~~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 34 SQSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQ 112 (399)
T ss_dssp HTCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCC
T ss_pred CCCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCC
Confidence 367888666 56889999888665444 899999999998888777765422 468889999876421 112257
Q ss_pred CCEEEECCCC
Q 011002 250 VDRVLLDAPC 259 (496)
Q Consensus 250 FD~VLlDpPC 259 (496)
+|.|+.-+..
T Consensus 113 ~D~Vih~Aa~ 122 (399)
T 3nzo_A 113 YDYVLNLSAL 122 (399)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999986543
No 474
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=84.89 E-value=2.7 Score=40.18 Aligned_cols=78 Identities=13% Similarity=0.120 Sum_probs=49.4
Q ss_pred CCCeEeecccC-CcHHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHH-HHcCCceEEEEecCCCCCccc---c-----C
Q 011002 178 EKERVIDMAAA-PGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANL-HRMGVTNTIVCNYDGNELPKV---L-----G 246 (496)
Q Consensus 178 ~g~~VLDlcAG-pGgktl~lA~l~~~~-g~V~AvDis~~rl~~l~~nl-~r~g~~nv~v~~~D~~~l~~~---~-----~ 246 (496)
.|.+||=.|++ +||.+.+++..+... ..|+.++.+.. .....+.+ ...+ ++.++..|..+.... . .
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888886 488898888765443 48999998875 22222222 2233 356777888764211 0 1
Q ss_pred CCCCCEEEECCC
Q 011002 247 LNTVDRVLLDAP 258 (496)
Q Consensus 247 ~~~FD~VLlDpP 258 (496)
.+.+|.++.++-
T Consensus 82 ~g~id~lv~nAg 93 (275)
T 2pd4_A 82 LGSLDFIVHSVA 93 (275)
T ss_dssp TSCEEEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 247899998774
No 475
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=84.84 E-value=9.3 Score=36.35 Aligned_cols=81 Identities=16% Similarity=0.165 Sum_probs=55.5
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeC-------------CHHHHHHHHHHHHHcCCceEEEEecCCCCCcc
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-------------KASRLKSLTANLHRMGVTNTIVCNYDGNELPK 243 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDi-------------s~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~ 243 (496)
.|.+||=.|++ ||.+.+++..+. ....|+++|. +...++.+...+...+. .+.++..|..+...
T Consensus 10 ~~k~~lVTGas-~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 10 EGRVAFITGAA-RGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVDTRDFDR 87 (277)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHH
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHH
Confidence 46778877755 667777776543 3358999998 78888888777777664 47788889877432
Q ss_pred cc--------CCCCCCEEEECCCCC
Q 011002 244 VL--------GLNTVDRVLLDAPCS 260 (496)
Q Consensus 244 ~~--------~~~~FD~VLlDpPCS 260 (496)
.. ..+..|.++.++-..
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11 015799999977543
No 476
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=84.84 E-value=7.3 Score=37.43 Aligned_cols=81 Identities=11% Similarity=0.136 Sum_probs=56.1
Q ss_pred CCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeC-CHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 179 KERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDi-s~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
+.+||=.|+ +||.+.+++..+. ....|+.+|. +...++.+...+....-..+.++..|..+..... ..+
T Consensus 25 ~k~~lVTGa-s~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 103 (281)
T 3v2h_A 25 TKTAVITGS-TSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG 103 (281)
T ss_dssp TCEEEEETC-SSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence 567887775 5677877777553 3348999998 7788888877777654456888889987642210 125
Q ss_pred CCCEEEECCCCC
Q 011002 249 TVDRVLLDAPCS 260 (496)
Q Consensus 249 ~FD~VLlDpPCS 260 (496)
.+|.++.++-..
T Consensus 104 ~iD~lv~nAg~~ 115 (281)
T 3v2h_A 104 GADILVNNAGVQ 115 (281)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 799999987543
No 477
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=84.82 E-value=9.4 Score=35.51 Aligned_cols=79 Identities=10% Similarity=0.052 Sum_probs=55.7
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---cC-----CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LG-----LN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~~-----~~ 248 (496)
.+.+||=.| |+|+.+.+++..+. ....|++++.++..+..+.+.+...+. ++.++..|..+.... +. .+
T Consensus 12 ~~k~vlItG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 12 DNRVAIVTG-GAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 466788666 45788888877553 335899999999988887777766653 477888898764321 10 14
Q ss_pred CCCEEEECCC
Q 011002 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~FD~VLlDpP 258 (496)
.+|.|+.++-
T Consensus 90 ~id~vi~~Ag 99 (260)
T 3awd_A 90 RVDILVACAG 99 (260)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899999764
No 478
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=84.77 E-value=14 Score=35.50 Aligned_cols=125 Identities=11% Similarity=0.117 Sum_probs=71.5
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHH-HHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKAS-RLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~-rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~ 247 (496)
.|.+||=.|++ ||.+.+++..+.. ...|+.++.+.. ..+.+...+...|. ++.++..|..+..... ..
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788877754 6778777775533 348889998765 45555555555553 5778889988642210 11
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~----~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
+.+|.++.++-..... .+ ....+.++..... .-...++..++..+ +.+|.||+.+..
T Consensus 124 g~iD~lvnnAg~~~~~----~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~----~~~g~iv~isS~ 184 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQ----QG--LEYITAEQLEKTFRINIFSYFHVTKAALSHL----KQGDVIINTASI 184 (291)
T ss_dssp SSCCEEEECCCCCCCC----SS--GGGCCHHHHHHHHHHHTHHHHHHHHHHHTTC----CTTCEEEEECCT
T ss_pred CCCCEEEECCCCcCCC----CC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHH----hhCCEEEEEech
Confidence 4799999976422110 00 1112333332222 22233455555554 788998886543
No 479
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=84.70 E-value=8.6 Score=37.17 Aligned_cols=124 Identities=14% Similarity=0.105 Sum_probs=72.9
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCC--HHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------C
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMK--ASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------G 246 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis--~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~ 246 (496)
.|.+||=.|+ +||.+.+++..+.. ...|+.++.+ ...++.+...+...|. ++.++..|..+..... .
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTC-CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4677887775 57788888775543 3478888886 4567777777777764 5778888987642110 0
Q ss_pred CCCCCEEEECCCCCC-CCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 247 LNTVDRVLLDAPCSG-TGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 247 ~~~FD~VLlDpPCSg-~Gvi~r~p~i~~~~s~~~i~~l~----~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
.+.+|.++.++--.. .+.+ ...+.++..... .-...++..++..+ +.+|.||+.+..
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~-------~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~----~~~g~Iv~isS~ 187 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEI-------KDLTSEQFQQTFAVNVFALFWITQEAIPLL----PKGASIITTSSI 187 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSG-------GGCCHHHHHHHHHHHTHHHHHHHHHHGGGC----CTTCEEEEECCG
T ss_pred cCCCCEEEECCCCcCCCCCc-------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHh----hcCCEEEEECCh
Confidence 157999999764321 1111 122333332222 12233455555544 778998886543
No 480
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=84.58 E-value=7.2 Score=37.58 Aligned_cols=79 Identities=23% Similarity=0.254 Sum_probs=58.2
Q ss_pred CCCeEeecccCCcHHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~-~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.|..+|=.|++. |.+..+|..+ .....|+.+|.+++.++.+.+.+...|. ++.++..|..+..... ..+
T Consensus 6 ~gKvalVTGas~-GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 6 KNKVVIVTGAGS-GIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 477788777655 5676666654 3446899999999999999999988885 4777889988743210 126
Q ss_pred CCCEEEECCC
Q 011002 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~FD~VLlDpP 258 (496)
..|.++.++-
T Consensus 84 ~iDiLVNNAG 93 (254)
T 4fn4_A 84 RIDVLCNNAG 93 (254)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 8999998874
No 481
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=84.44 E-value=6.7 Score=37.76 Aligned_cols=80 Identities=13% Similarity=0.099 Sum_probs=56.2
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~ 248 (496)
.+.+||=.|++ ||.+..++..+. ....|+.+|.+...++.+...+...|. .+.++..|..+.... . ..+
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 27 PSPVALITGAG-SGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG-QAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CCCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 46778877754 667777776543 345899999999999888887766553 477888898764211 0 115
Q ss_pred CCCEEEECCCC
Q 011002 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~FD~VLlDpPC 259 (496)
.+|.++.++-.
T Consensus 105 ~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 HLDIVVANAGI 115 (283)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999997754
No 482
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=84.30 E-value=6.1 Score=37.10 Aligned_cols=79 Identities=9% Similarity=0.079 Sum_probs=51.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCC----cEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---cC----
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNT----GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LG---- 246 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~----g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~~---- 246 (496)
.+.+||=.|+ +|+.+.+++..+... ..|++++.+...++.+...... + .++.++..|..+.... +.
T Consensus 20 ~~k~vlITGa-sggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~v~~~~~~~~~ 96 (267)
T 1sny_A 20 HMNSILITGC-NRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-H-SNIHILEIDLRNFDAYDKLVADIEG 96 (267)
T ss_dssp CCSEEEESCC-SSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH-C-TTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhcc-C-CceEEEEecCCChHHHHHHHHHHHH
Confidence 3567776765 688888888765443 4899999987766554333222 3 3578888998765321 10
Q ss_pred -CC--CCCEEEECCCC
Q 011002 247 -LN--TVDRVLLDAPC 259 (496)
Q Consensus 247 -~~--~FD~VLlDpPC 259 (496)
.+ .+|.|+..+-.
T Consensus 97 ~~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 97 VTKDQGLNVLFNNAGI 112 (267)
T ss_dssp HHGGGCCSEEEECCCC
T ss_pred hcCCCCccEEEECCCc
Confidence 01 69999997643
No 483
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=84.22 E-value=1.2 Score=44.55 Aligned_cols=95 Identities=15% Similarity=0.106 Sum_probs=54.8
Q ss_pred CCC-CeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc----CCCCC
Q 011002 177 QEK-ERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL----GLNTV 250 (496)
Q Consensus 177 ~~g-~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~----~~~~F 250 (496)
++| .+|| +..|+|+.++.++++... ...|+++|.++.+++.++ .+|.+.+ +..+...+.... ....|
T Consensus 162 ~~g~~~vl-i~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~~~--~~~~~~~~~~~v~~~~~~~g~ 234 (349)
T 3pi7_A 162 QEGEKAFV-MTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK----DIGAAHV--LNEKAPDFEATLREVMKAEQP 234 (349)
T ss_dssp HHCCSEEE-ESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH----HHTCSEE--EETTSTTHHHHHHHHHHHHCC
T ss_pred hCCCCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCCEE--EECCcHHHHHHHHHHhcCCCC
Confidence 556 4555 555666665544443321 248999999999987765 4686543 333322221111 11369
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 011002 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 251 D~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYS 311 (496)
|+|+- |+|.. .+..++++| ++||++|..
T Consensus 235 D~vid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~ 262 (349)
T 3pi7_A 235 RIFLD---AVTGP--------------------------LASAIFNAM----PKRARWIIY 262 (349)
T ss_dssp CEEEE---SSCHH--------------------------HHHHHHHHS----CTTCEEEEC
T ss_pred cEEEE---CCCCh--------------------------hHHHHHhhh----cCCCEEEEE
Confidence 99975 33321 134566776 999998864
No 484
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=84.14 E-value=9 Score=36.21 Aligned_cols=80 Identities=13% Similarity=0.154 Sum_probs=55.1
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCCC-cEEEEE-eCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYAN-EMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~~-g~V~Av-Dis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~ 247 (496)
.|.+||=.|+ +||.+.+++..+... ..|+.+ +.+...++.+...+...|. ++.++..|..+..... ..
T Consensus 3 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGS-SRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecC-CchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4567776665 577888887765433 467765 8899998888888877664 4778888987643210 11
Q ss_pred CCCCEEEECCCC
Q 011002 248 NTVDRVLLDAPC 259 (496)
Q Consensus 248 ~~FD~VLlDpPC 259 (496)
+.+|.++.++-.
T Consensus 81 g~id~lv~nAg~ 92 (258)
T 3oid_A 81 GRLDVFVNNAAS 92 (258)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999997743
No 485
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=84.08 E-value=5.9 Score=36.61 Aligned_cols=78 Identities=17% Similarity=0.157 Sum_probs=53.0
Q ss_pred CCeEeecccCCcHHHHHHHHHcCCCc--------EEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c--
Q 011002 179 KERVIDMAAAPGGKTTYIAALMKNTG--------LIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-- 245 (496)
Q Consensus 179 g~~VLDlcAGpGgktl~lA~l~~~~g--------~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-- 245 (496)
+.+||=.| |+|+.+.+++..+...| .|++++.++..++.+...+...+ .++.++..|..+.... +
T Consensus 2 ~k~vlITG-asggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 2 KHILLITG-AGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp CEEEEEET-TTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-CEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC-CeeeEEEecCCCHHHHHHHHHH
Confidence 34566555 56788888877553223 79999999998888877776554 3577888898764211 0
Q ss_pred ---CCCCCCEEEECCC
Q 011002 246 ---GLNTVDRVLLDAP 258 (496)
Q Consensus 246 ---~~~~FD~VLlDpP 258 (496)
..+.+|.|+.++-
T Consensus 80 ~~~~~g~id~li~~Ag 95 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAG 95 (244)
T ss_dssp HHHHTSCCSEEEECCC
T ss_pred HHHhCCCCCEEEEcCC
Confidence 0147999999764
No 486
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=84.05 E-value=1.3 Score=43.38 Aligned_cols=80 Identities=8% Similarity=0.029 Sum_probs=51.6
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcc---ccCCCCCCEE
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK---VLGLNTVDRV 253 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~---~~~~~~FD~V 253 (496)
.+.+||=.| |+|+.+.+++..+.. ...|++++.+......+...+....-.++.++.+|..+... .+....+|.|
T Consensus 4 ~~~~vlVTG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (341)
T 3enk_A 4 TKGTILVTG-GAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA 82 (341)
T ss_dssp SSCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred CCcEEEEec-CCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence 356777555 678899988876543 34899999876655555444444322357788889876422 1211379999
Q ss_pred EECCC
Q 011002 254 LLDAP 258 (496)
Q Consensus 254 LlDpP 258 (496)
+..+-
T Consensus 83 ih~A~ 87 (341)
T 3enk_A 83 IHFAA 87 (341)
T ss_dssp EECCC
T ss_pred EECcc
Confidence 98664
No 487
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=83.96 E-value=2.1 Score=42.88 Aligned_cols=55 Identities=24% Similarity=0.228 Sum_probs=33.4
Q ss_pred CCCCCCeEeeccc--CCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceE
Q 011002 175 APQEKERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNT 231 (496)
Q Consensus 175 ~~~~g~~VLDlcA--GpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv 231 (496)
.+++|++||=.|+ |.|..++.+|..++. ..|..++.++.+-+ ..+.++.+|.+.+
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~-~~~~~~~lGa~~v 220 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQK-LSDRLKSLGAEHV 220 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHH-HHHHHHHTTCSEE
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHH-HHHHHHhcCCcEE
Confidence 6789999999986 346666677776642 34555665543211 1123456887654
No 488
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=83.92 E-value=12 Score=34.92 Aligned_cols=77 Identities=13% Similarity=0.180 Sum_probs=51.5
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~ 248 (496)
.|.+||=.|+ +|+.+.+++..+.. ...|++++.++..++.+...+ + .++.++..|..+.... . ..+
T Consensus 5 ~~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (253)
T 1hxh_A 5 QGKVALVTGG-ASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---G-ERSMFVRHDVSSEADWTLVMAAVQRRLG 79 (253)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C-TTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C-CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3567776665 57788888775543 348999999998877665554 3 3477888898764221 0 014
Q ss_pred CCCEEEECCCC
Q 011002 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~FD~VLlDpPC 259 (496)
.+|.|+.++-.
T Consensus 80 ~id~lv~~Ag~ 90 (253)
T 1hxh_A 80 TLNVLVNNAGI 90 (253)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999997753
No 489
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=83.90 E-value=3.7 Score=37.45 Aligned_cols=69 Identities=17% Similarity=0.263 Sum_probs=48.7
Q ss_pred eEeecccCCcHHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCC-C---ccccCCCCCCEEEE
Q 011002 181 RVIDMAAAPGGKTTYIAALMKNTG-LIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNE-L---PKVLGLNTVDRVLL 255 (496)
Q Consensus 181 ~VLDlcAGpGgktl~lA~l~~~~g-~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~-l---~~~~~~~~FD~VLl 255 (496)
+||=.| |+|+.+.+++..+...| .|++++.++..+..+ .++.++.+|..+ . ...+ ..+|.|+.
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~--~~~d~vi~ 69 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------NNVKAVHFDVDWTPEEMAKQL--HGMDAIIN 69 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---------TTEEEEECCTTSCHHHHHTTT--TTCSEEEE
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---------CCceEEEecccCCHHHHHHHH--cCCCEEEE
Confidence 566555 67899999988775544 899999987654322 468889999887 3 2223 57999998
Q ss_pred CCCCCC
Q 011002 256 DAPCSG 261 (496)
Q Consensus 256 DpPCSg 261 (496)
.+....
T Consensus 70 ~ag~~~ 75 (219)
T 3dqp_A 70 VSGSGG 75 (219)
T ss_dssp CCCCTT
T ss_pred CCcCCC
Confidence 765443
No 490
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=83.87 E-value=6.1 Score=37.89 Aligned_cols=80 Identities=13% Similarity=0.040 Sum_probs=54.9
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~ 248 (496)
.|.+||=.|+ +||.+..++..+. ....|+++|.++..++.+.+.+...| ++.++..|..+.... + ..+
T Consensus 28 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (276)
T 2b4q_A 28 AGRIALVTGG-SRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLSSEAGARRLAQALGELSA 104 (276)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 4667887765 5778887777553 33589999999988887777665544 577788888764211 0 125
Q ss_pred CCCEEEECCCCC
Q 011002 249 TVDRVLLDAPCS 260 (496)
Q Consensus 249 ~FD~VLlDpPCS 260 (496)
.+|.|+.++-..
T Consensus 105 ~iD~lvnnAg~~ 116 (276)
T 2b4q_A 105 RLDILVNNAGTS 116 (276)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 799999977533
No 491
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=83.81 E-value=0.79 Score=45.94 Aligned_cols=55 Identities=18% Similarity=0.175 Sum_probs=34.2
Q ss_pred CCCCC-CeEeeccc--CCcHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCceE
Q 011002 175 APQEK-ERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNT 231 (496)
Q Consensus 175 ~~~~g-~~VLDlcA--GpGgktl~lA~l~~~~g~V~AvDis~~rl~~l~~nl~r~g~~nv 231 (496)
.+++| ++||=.|| +.|..++.+|..++ ..|+++..+...+......+..+|.+.+
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~~~~~~~~~~~lGa~~v 220 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLLN--FNSISVIRDRPNLDEVVASLKELGATQV 220 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHT--CEEEEEECCCTTHHHHHHHHHHHTCSEE
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHCC--CEEEEEecCccccHHHHHHHHhcCCeEE
Confidence 57889 99998876 33555666676654 4677776554433233334456888653
No 492
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=83.72 E-value=5.4 Score=38.14 Aligned_cols=124 Identities=17% Similarity=0.133 Sum_probs=72.5
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEE-eCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYAN-EMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~Av-Dis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~ 247 (496)
.|.+||=.|++ ||.+..++..+.. ...|+.+ ..+...++.+...+...|. ++.++..|..+..... ..
T Consensus 26 ~~k~~lVTGas-~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 26 TNKVAIVTGAS-RGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp -CCEEEEESCS-SHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46778866654 6677777765433 3366665 5567778888877777764 4777888987643210 01
Q ss_pred CCCCEEEECCCCCCCCcccCCchhhccCCHHHHHH----HHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQK----CSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 248 ~~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~----l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
+..|.++.++-....+.+ ...+.++... ...-...++..++..+ +.+|.||+.+.+
T Consensus 104 g~iD~lvnnAG~~~~~~~-------~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~----~~~g~iv~isS~ 163 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTI-------AETGDAVFDRVIAVNLKGTFNTLREAAQRL----RVGGRIINMSTS 163 (267)
T ss_dssp SCEEEEEECCCCCCCCCG-------GGCCHHHHHHHHHHHHHHHHHHHHHHHHHE----EEEEEEEEECCT
T ss_pred CCCCEEEECCCCCCCCCh-------hhCCHHHHHHHHHHHHHHHHHHHHHHHHHH----hhCCeEEEEeCh
Confidence 479999997743322221 1223333322 1222234555666655 678998887644
No 493
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=83.71 E-value=13 Score=35.70 Aligned_cols=123 Identities=15% Similarity=0.142 Sum_probs=70.1
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~ 248 (496)
.|.+||=.|++ ||.+.+++..+. ....|+.+|.+...++.+... ++. .+.++..|..+.... . ..+
T Consensus 26 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (277)
T 4dqx_A 26 NQRVCIVTGGG-SGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---IGS-KAFGVRVDVSSAKDAESMVEKTTAKWG 100 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH---HCT-TEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCC-ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 36677777754 677877777553 335899999999887766554 342 467778898764221 0 014
Q ss_pred CCCEEEECCCCCCCCcccCCchhhccCCHHHHHHH----HHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 011002 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 249 ~FD~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l----~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCS 314 (496)
.+|.++.++-....+.+. ..+.++.... ..-...++..++..+.. ..+|.||+.+..
T Consensus 101 ~iD~lv~nAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~~~g~iv~isS~ 161 (277)
T 4dqx_A 101 RVDVLVNNAGFGTTGNVV-------TIPEETWDRIMSVNVKGIFLCSKYVIPVMRR--NGGGSIINTTSY 161 (277)
T ss_dssp CCCEEEECCCCCCCBCTT-------TSCHHHHHHHHHHHTHHHHHHHHHHHHHHTT--TTCEEEEEECCG
T ss_pred CCCEEEECCCcCCCCCcc-------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCcEEEEECch
Confidence 799999977543333221 1233333221 11223345555555410 246788876543
No 494
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=83.60 E-value=7.1 Score=37.33 Aligned_cols=80 Identities=18% Similarity=0.189 Sum_probs=56.0
Q ss_pred CCCeEeecccCCcHHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-----CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~~-~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-----~~~ 248 (496)
.+.+||=.|+ +|+.+.+++..+.. ...|++++.++..++.+.+.+...|. ++.++..|..+.... + ..+
T Consensus 21 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 21 DSEVALVTGA-TSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp TSCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 3667887775 57788887775543 34899999999988888777776664 477788898764211 0 124
Q ss_pred CCCEEEECCCC
Q 011002 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~FD~VLlDpPC 259 (496)
.+|.|+.++-.
T Consensus 99 ~iD~lv~~Ag~ 109 (277)
T 2rhc_B 99 PVDVLVNNAGR 109 (277)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999997743
No 495
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=83.56 E-value=1.9 Score=45.19 Aligned_cols=120 Identities=13% Similarity=0.101 Sum_probs=65.4
Q ss_pred ccCCcHHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHH------------HHc-CCceEEEEecCCCCCccccCCCCCC
Q 011002 186 AAAPGGKTTYIAALMKNTG-LIYANEMKASRLKSLTANL------------HRM-GVTNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 186 cAGpGgktl~lA~l~~~~g-~V~AvDis~~rl~~l~~nl------------~r~-g~~nv~v~~~D~~~l~~~~~~~~FD 251 (496)
.-|.|..++.+|..+...| .|+++|+++++++.+.+.. .+. ...++.+. .|. .... ...|
T Consensus 13 vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~t-td~---~ea~--~~aD 86 (446)
T 4a7p_A 13 MIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFT-TDL---AEGV--KDAD 86 (446)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEE-SCH---HHHH--TTCS
T ss_pred EEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEE-CCH---HHHH--hcCC
Confidence 3477888888877665444 8999999999998876521 000 01123332 221 1112 4689
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHh
Q 011002 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKK 330 (496)
Q Consensus 252 ~VLlDpPCSg~Gvi~r~p~i~~~~s~~~i~~l~~lQ~~LL~~A~~~L~~~lkpGG~LVYSTCSl~~eENE~vV~~~L~~ 330 (496)
+|++=.|-.... -...|++.. +..+++.+.+.+++|-.+|+. +|+.|.-.+.+...+.+.
T Consensus 87 vvii~Vptp~~~-~~~~~Dl~~-----------------v~~v~~~i~~~l~~g~iVV~~-STv~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 87 AVFIAVGTPSRR-GDGHADLSY-----------------VFAAAREIAENLTKPSVIVTK-STVPVGTGDEVERIIAEV 146 (446)
T ss_dssp EEEECCCCCBCT-TTCCBCTHH-----------------HHHHHHHHHHSCCSCCEEEEC-SCCCTTHHHHHHHHHHHH
T ss_pred EEEEEcCCCCcc-ccCCccHHH-----------------HHHHHHHHHHhcCCCCEEEEe-CCCCchHHHHHHHHHHHh
Confidence 999854422100 012333211 222222233335887666664 478887777777666554
No 496
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=83.50 E-value=12 Score=35.54 Aligned_cols=81 Identities=16% Similarity=0.152 Sum_probs=54.7
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHH-HHcCCceEEEEecCCCCCccc---c-----CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANL-HRMGVTNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl-~r~g~~nv~v~~~D~~~l~~~---~-----~~ 247 (496)
.|.+||=.|+ +||.+.+++..+. ....|++++.++..++.+...+ ...|. ++.++..|..+.... + ..
T Consensus 20 ~~k~~lVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 20 RGRVALVTGG-SRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNYEEVKKLLEAVKEKF 97 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4667776665 5778888877553 3348999999999888777766 44454 467778888764211 0 01
Q ss_pred CCCCEEEECCCCC
Q 011002 248 NTVDRVLLDAPCS 260 (496)
Q Consensus 248 ~~FD~VLlDpPCS 260 (496)
+.+|.|+.++-..
T Consensus 98 g~iD~lvnnAg~~ 110 (267)
T 1vl8_A 98 GKLDTVVNAAGIN 110 (267)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4799999977543
No 497
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=83.41 E-value=2.3 Score=40.26 Aligned_cols=83 Identities=10% Similarity=0.080 Sum_probs=51.5
Q ss_pred CCCeEeecccCC-cHHHHHHHHHcCC-CcEEEEEeCCHHHH-HHHHHHH-HHcCCceEEEEecCCCCCcccc--------
Q 011002 178 EKERVIDMAAAP-GGKTTYIAALMKN-TGLIYANEMKASRL-KSLTANL-HRMGVTNTIVCNYDGNELPKVL-------- 245 (496)
Q Consensus 178 ~g~~VLDlcAGp-Ggktl~lA~l~~~-~g~V~AvDis~~rl-~~l~~nl-~r~g~~nv~v~~~D~~~l~~~~-------- 245 (496)
.|.+||=.|++. ||.+.+++..+.. ...|+.++.+.... +...+.+ ...+. ++.++..|..+.....
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI-KAKAYKCQVDSYESCEKLVKDVVA 97 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCC-CEECCBCCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCC-ceeEEecCCCCHHHHHHHHHHHHH
Confidence 477899888864 7888888775543 34788887764333 3333333 33443 5778888887643210
Q ss_pred CCCCCCEEEECCCCCC
Q 011002 246 GLNTVDRVLLDAPCSG 261 (496)
Q Consensus 246 ~~~~FD~VLlDpPCSg 261 (496)
..+.+|.++.++-...
T Consensus 98 ~~g~id~li~nAg~~~ 113 (267)
T 3gdg_A 98 DFGQIDAFIANAGATA 113 (267)
T ss_dssp HTSCCSEEEECCCCCC
T ss_pred HcCCCCEEEECCCcCC
Confidence 1257899999875433
No 498
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=83.37 E-value=11 Score=36.10 Aligned_cols=77 Identities=13% Similarity=0.270 Sum_probs=51.8
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CCC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~~ 248 (496)
.|.+||=.|++ ||.+.+++..+. ....|+.+|.+...++.+...+ +. .+.++..|..+..... ..+
T Consensus 28 ~gk~vlVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 28 AGKVAIVTGAG-AGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GC-GAAACRVDVSDEQQIIAMVDACVAAFG 102 (277)
T ss_dssp TTCEEEETTTT-STHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CS-SCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CC-cceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46778877755 667777766543 3458999999998887766554 43 4677788987643210 114
Q ss_pred CCCEEEECCCC
Q 011002 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~FD~VLlDpPC 259 (496)
..|.++.++-.
T Consensus 103 ~iD~lvnnAg~ 113 (277)
T 3gvc_A 103 GVDKLVANAGV 113 (277)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999997743
No 499
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=83.35 E-value=8.1 Score=35.92 Aligned_cols=80 Identities=16% Similarity=0.157 Sum_probs=52.9
Q ss_pred CCCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCCccc---c-CCCCCC
Q 011002 177 QEKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-GLNTVD 251 (496)
Q Consensus 177 ~~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDis~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~---~-~~~~FD 251 (496)
.++.+||=.|+ +||.+.+++..+. ....|+.++.+...++.+...+. .++.+...|..+.... + ..+.+|
T Consensus 12 ~~~k~vlVTGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 12 LTGKTSLITGA-SSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp CTTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 45778887775 5677777776553 33589999999998877766552 3577778888764211 1 124799
Q ss_pred EEEECCCCCC
Q 011002 252 RVLLDAPCSG 261 (496)
Q Consensus 252 ~VLlDpPCSg 261 (496)
.|+.++-...
T Consensus 87 ~li~~Ag~~~ 96 (249)
T 3f9i_A 87 ILVCNAGITS 96 (249)
T ss_dssp EEEECCC---
T ss_pred EEEECCCCCC
Confidence 9999875443
No 500
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=83.35 E-value=6.3 Score=37.86 Aligned_cols=79 Identities=18% Similarity=0.148 Sum_probs=55.5
Q ss_pred CCCeEeecccCCcHHHHHHHHHcC-CCcEEEEEeC-CHHHHHHHHHHHHHcCCceEEEEecCCCCCcccc--------CC
Q 011002 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDlcAGpGgktl~lA~l~~-~~g~V~AvDi-s~~rl~~l~~nl~r~g~~nv~v~~~D~~~l~~~~--------~~ 247 (496)
.+.+||=.|+ +||.+.+++..+. ....|+.+|. +...++.+...+...|. ++.++..|..+..... ..
T Consensus 28 ~~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 28 ARPVAIVTGG-RRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA-RVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTC-CEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred CCCEEEEecC-CCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4677887775 4667777776543 3348989985 88888888888877764 5778889988753211 01
Q ss_pred CCCCEEEECCC
Q 011002 248 NTVDRVLLDAP 258 (496)
Q Consensus 248 ~~FD~VLlDpP 258 (496)
+..|.++.++-
T Consensus 106 g~iD~lvnnAg 116 (280)
T 4da9_A 106 GRIDCLVNNAG 116 (280)
T ss_dssp SCCCEEEEECC
T ss_pred CCCCEEEECCC
Confidence 47999999774
Done!