Query 011003
Match_columns 496
No_of_seqs 478 out of 3764
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 18:47:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011003.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011003hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jxv_A 70 kDa peptidyl-prolyl 100.0 1.3E-68 4.4E-73 535.7 28.5 354 28-383 2-355 (356)
2 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 5E-51 1.7E-55 424.4 36.9 333 35-495 29-364 (457)
3 1q1c_A FK506-binding protein 4 100.0 4.6E-40 1.6E-44 316.3 28.5 234 24-264 36-276 (280)
4 1q1c_A FK506-binding protein 4 100.0 4.8E-37 1.6E-41 295.3 29.5 223 151-389 49-280 (280)
5 3jxv_A 70 kDa peptidyl-prolyl 100.0 1.7E-36 5.7E-41 303.2 27.4 220 35-261 125-354 (356)
6 2if4_A ATFKBP42; FKBP-like, al 100.0 3.6E-33 1.2E-37 278.5 21.9 223 269-495 48-277 (338)
7 1p5q_A FKBP52, FK506-binding p 100.0 1.3E-30 4.5E-35 259.8 26.4 223 263-495 18-243 (336)
8 1yat_A FK506 binding protein; 99.9 4.7E-24 1.6E-28 177.1 14.9 111 34-144 3-113 (113)
9 3kz7_A FK506-binding protein 3 99.9 5.3E-24 1.8E-28 178.6 14.9 109 35-143 2-118 (119)
10 1r9h_A FKB-6, FK506 binding pr 99.9 3.7E-24 1.2E-28 183.1 14.1 121 35-156 12-134 (135)
11 3b7x_A FK506-binding protein 6 99.9 6.6E-25 2.3E-29 187.5 9.4 126 18-144 5-133 (134)
12 3o5q_A Peptidyl-prolyl CIS-tra 99.9 4.5E-24 1.5E-28 181.0 14.2 111 35-145 17-127 (128)
13 3o5e_A Peptidyl-prolyl CIS-tra 99.9 5.8E-24 2E-28 183.9 15.1 110 35-144 33-142 (144)
14 2ppn_A FK506-binding protein 1 99.9 1E-23 3.5E-28 173.4 13.6 106 38-143 1-106 (107)
15 2y78_A Peptidyl-prolyl CIS-tra 99.9 1.6E-23 5.4E-28 178.3 14.9 110 33-143 24-133 (133)
16 2if4_A ATFKBP42; FKBP-like, al 99.9 6.5E-24 2.2E-28 211.5 14.3 118 27-145 39-160 (338)
17 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 1.4E-24 5E-29 225.1 9.2 226 265-495 24-330 (457)
18 2lkn_A AH receptor-interacting 99.9 4.9E-24 1.7E-28 186.0 10.0 118 33-150 6-163 (165)
19 2f4e_A ATFKBP42; FKBP-like, al 99.9 3.7E-23 1.3E-27 185.2 15.9 129 19-148 31-163 (180)
20 2lgo_A FKBP; infectious diseas 99.9 1.9E-23 6.4E-28 177.3 12.6 113 31-143 16-130 (130)
21 4dip_A Peptidyl-prolyl CIS-tra 99.9 5E-23 1.7E-27 174.0 14.5 111 33-145 8-123 (125)
22 3uf8_A Ubiquitin-like protein 99.9 1.2E-22 4.2E-27 186.2 15.9 111 32-143 99-209 (209)
23 1jvw_A Macrophage infectivity 99.9 5.3E-23 1.8E-27 181.2 12.5 111 32-145 32-143 (167)
24 2vn1_A 70 kDa peptidylprolyl i 99.9 2.4E-22 8.1E-27 170.8 15.7 113 33-145 11-127 (129)
25 3oe2_A Peptidyl-prolyl CIS-tra 99.9 1.2E-22 4.2E-27 185.5 14.2 106 33-144 113-218 (219)
26 3o5e_A Peptidyl-prolyl CIS-tra 99.9 2.5E-22 8.4E-27 173.6 14.8 116 262-382 25-142 (144)
27 2jwx_A FKBP38NTD, FK506-bindin 99.9 4.8E-22 1.6E-26 173.1 16.5 110 33-146 38-150 (157)
28 1u79_A FKBP-type peptidyl-prol 99.9 7.1E-23 2.4E-27 173.9 10.8 112 31-143 6-128 (129)
29 2f4e_A ATFKBP42; FKBP-like, al 99.9 3E-22 1E-26 179.3 14.9 128 268-399 47-179 (180)
30 1fd9_A Protein (macrophage inf 99.9 2.3E-22 8E-27 183.9 14.4 111 32-145 101-211 (213)
31 3kz7_A FK506-binding protein 3 99.9 7.1E-22 2.4E-26 165.6 15.4 112 269-382 3-119 (119)
32 2awg_A 38 kDa FK-506 binding p 99.9 6.2E-22 2.1E-26 165.5 14.9 108 33-144 8-117 (118)
33 3o5q_A Peptidyl-prolyl CIS-tra 99.9 6.3E-22 2.1E-26 167.8 14.1 111 268-383 17-127 (128)
34 1q6h_A FKBP-type peptidyl-prol 99.9 1.2E-21 4E-26 180.5 14.9 107 33-143 117-223 (224)
35 1r9h_A FKB-6, FK506 binding pr 99.9 2.7E-21 9.4E-26 165.2 13.9 115 264-383 6-122 (135)
36 2d9f_A FK506-binding protein 8 99.9 1.6E-21 5.5E-26 166.7 12.4 112 33-148 12-126 (135)
37 3b7x_A FK506-binding protein 6 99.9 1.1E-21 3.8E-26 167.5 10.9 115 262-382 18-133 (134)
38 1yat_A FK506 binding protein; 99.9 7E-21 2.4E-25 157.9 15.0 109 269-382 5-113 (113)
39 2lkn_A AH receptor-interacting 99.9 4.5E-22 1.5E-26 173.6 7.9 117 267-385 7-160 (165)
40 2ppn_A FK506-binding protein 1 99.9 4.7E-21 1.6E-25 157.4 13.4 107 271-382 1-107 (107)
41 4dip_A Peptidyl-prolyl CIS-tra 99.9 4.5E-21 1.5E-25 162.0 12.9 115 266-384 8-124 (125)
42 1jvw_A Macrophage infectivity 99.8 9.3E-21 3.2E-25 166.9 14.6 124 267-399 34-157 (167)
43 2vn1_A 70 kDa peptidylprolyl i 99.8 1.6E-20 5.5E-25 159.5 15.5 114 265-383 11-127 (129)
44 2awg_A 38 kDa FK-506 binding p 99.8 1.7E-20 5.6E-25 156.8 14.9 112 262-382 5-117 (118)
45 2y78_A Peptidyl-prolyl CIS-tra 99.8 1.7E-20 5.7E-25 159.6 14.3 110 266-381 24-133 (133)
46 2jwx_A FKBP38NTD, FK506-bindin 99.8 1.7E-20 5.8E-25 163.3 14.6 115 263-386 36-152 (157)
47 2pbc_A FK506-binding protein 2 99.8 1.1E-20 3.7E-25 153.7 11.8 95 51-145 4-98 (102)
48 2d9f_A FK506-binding protein 8 99.8 1.4E-20 4.7E-25 160.9 11.4 121 263-392 10-132 (135)
49 2lgo_A FKBP; infectious diseas 99.8 2.9E-20 1E-24 157.6 13.1 108 269-381 21-130 (130)
50 3oe2_A Peptidyl-prolyl CIS-tra 99.8 3.5E-20 1.2E-24 169.3 14.3 105 267-382 114-218 (219)
51 3uf8_A Ubiquitin-like protein 99.8 2.2E-19 7.5E-24 164.5 17.2 111 265-381 99-209 (209)
52 1fd9_A Protein (macrophage inf 99.8 1.8E-19 6.2E-24 164.8 13.9 110 266-383 102-211 (213)
53 1u79_A FKBP-type peptidyl-prol 99.8 1.3E-19 4.5E-24 153.7 11.8 112 267-381 9-128 (129)
54 4dt4_A FKBP-type 16 kDa peptid 99.8 3.8E-20 1.3E-24 162.3 7.1 133 52-193 24-159 (169)
55 1p5q_A FKBP52, FK506-binding p 99.8 4E-19 1.4E-23 176.6 14.5 254 147-494 19-276 (336)
56 3prb_A FKBP-type peptidyl-prol 99.8 6.6E-20 2.3E-24 168.6 6.9 167 53-232 2-190 (231)
57 1q6h_A FKBP-type peptidyl-prol 99.8 1E-18 3.5E-23 160.9 14.6 106 268-382 119-224 (224)
58 2kr7_A FKBP-type peptidyl-prol 99.8 4.5E-19 1.5E-23 153.9 11.4 133 51-194 5-141 (151)
59 3pr9_A FKBP-type peptidyl-prol 99.8 1E-19 3.5E-24 158.1 6.4 130 53-195 2-146 (157)
60 2pbc_A FK506-binding protein 2 99.8 1E-18 3.5E-23 142.0 11.5 96 284-384 4-99 (102)
61 1ix5_A FKBP; ppiase, isomerase 99.8 4E-20 1.4E-24 160.5 1.6 129 52-192 1-144 (151)
62 2kfw_A FKBP-type peptidyl-prol 99.8 6.1E-19 2.1E-23 158.6 8.4 132 52-193 2-135 (196)
63 2k8i_A SLYD, peptidyl-prolyl C 99.8 3.1E-18 1.1E-22 151.0 10.7 135 53-197 3-139 (171)
64 3cgm_A SLYD, peptidyl-prolyl C 99.7 1.3E-17 4.5E-22 145.2 7.6 130 53-197 3-135 (158)
65 1hxv_A Trigger factor; FKBP fo 99.6 4.5E-16 1.5E-20 128.0 7.1 91 44-143 22-112 (113)
66 4dt4_A FKBP-type 16 kDa peptid 99.6 1.3E-14 4.3E-19 127.2 10.1 73 285-359 24-96 (169)
67 3pr9_A FKBP-type peptidyl-prol 99.5 3.2E-14 1.1E-18 123.4 10.3 73 286-359 2-85 (157)
68 3rkv_A Putative peptidylprolyl 99.5 1.2E-14 4.1E-19 127.9 7.5 104 392-495 4-110 (162)
69 1hxv_A Trigger factor; FKBP fo 99.5 3.6E-14 1.2E-18 116.5 7.7 84 284-381 28-112 (113)
70 2kr7_A FKBP-type peptidyl-prol 99.5 1.9E-13 6.5E-18 118.4 11.8 73 284-359 5-78 (151)
71 2hr2_A Hypothetical protein; a 99.5 7.4E-14 2.5E-18 121.3 8.2 103 390-495 2-115 (159)
72 3prb_A FKBP-type peptidyl-prol 99.4 3E-13 1E-17 124.3 10.6 73 286-359 2-85 (231)
73 2k8i_A SLYD, peptidyl-prolyl C 99.4 5.8E-13 2E-17 117.3 11.6 70 286-358 3-72 (171)
74 1ix5_A FKBP; ppiase, isomerase 99.4 9.4E-14 3.2E-18 120.3 6.3 74 286-359 2-86 (151)
75 2kfw_A FKBP-type peptidyl-prol 99.4 4.5E-13 1.5E-17 120.4 10.4 70 286-358 3-72 (196)
76 4gco_A Protein STI-1; structur 99.4 1.1E-13 3.9E-18 116.6 5.2 84 397-495 11-94 (126)
77 3cgm_A SLYD, peptidyl-prolyl C 99.3 3.2E-12 1.1E-16 111.2 9.8 66 286-359 3-68 (158)
78 2fbn_A 70 kDa peptidylprolyl i 99.3 4E-12 1.4E-16 115.5 10.6 123 373-495 12-135 (198)
79 4gcn_A Protein STI-1; structur 99.3 1.4E-12 4.9E-17 109.9 3.3 84 395-493 4-94 (127)
80 1w26_A Trigger factor, TF; cha 99.2 9E-12 3.1E-16 126.7 7.1 99 51-157 156-254 (432)
81 1ihg_A Cyclophilin 40; ppiase 99.2 3E-11 1E-15 121.3 8.1 105 391-495 215-320 (370)
82 3upv_A Heat shock protein STI1 99.1 3.4E-11 1.2E-15 100.6 5.2 83 398-495 3-85 (126)
83 1t11_A Trigger factor, TF; hel 99.1 2.8E-11 9.5E-16 121.4 4.4 100 51-158 159-258 (392)
84 3gyz_A Chaperone protein IPGC; 99.0 2E-10 6.7E-15 99.9 5.5 84 397-495 34-117 (151)
85 2l6j_A TPR repeat-containing p 99.0 2.4E-10 8E-15 92.5 4.8 82 398-494 3-90 (111)
86 1w26_A Trigger factor, TF; cha 99.0 6E-10 2.1E-14 113.3 7.4 87 284-383 156-242 (432)
87 3sz7_A HSC70 cochaperone (SGT) 99.0 4.6E-10 1.6E-14 98.4 5.3 85 396-495 8-92 (164)
88 1t11_A Trigger factor, TF; hel 98.8 1.5E-09 5.1E-14 108.9 4.2 130 284-426 159-293 (392)
89 2vgx_A Chaperone SYCD; alterna 98.8 3E-09 1E-13 91.9 5.5 83 398-495 20-102 (148)
90 4gco_A Protein STI-1; structur 98.8 4.3E-09 1.5E-13 88.3 5.4 80 399-493 47-126 (126)
91 3q49_B STIP1 homology and U bo 98.8 8.3E-09 2.8E-13 86.7 6.9 82 399-495 9-90 (137)
92 2xcb_A PCRH, regulatory protei 98.8 5.4E-09 1.8E-13 89.3 5.5 83 398-495 17-99 (142)
93 4ga2_A E3 SUMO-protein ligase 98.8 4.1E-09 1.4E-13 91.2 4.7 82 398-494 30-111 (150)
94 2c2l_A CHIP, carboxy terminus 98.8 9.8E-09 3.3E-13 98.7 7.1 82 399-495 4-85 (281)
95 1na3_A Designed protein CTPR2; 98.7 2.6E-08 8.9E-13 77.1 6.9 82 399-495 9-90 (91)
96 1hxi_A PEX5, peroxisome target 98.7 9.2E-09 3.2E-13 85.5 4.1 79 401-494 19-97 (121)
97 2dba_A Smooth muscle cell asso 98.7 3.1E-08 1.1E-12 84.0 7.0 84 399-494 28-111 (148)
98 1a17_A Serine/threonine protei 98.7 4.5E-08 1.6E-12 84.7 8.0 89 392-495 6-94 (166)
99 1elw_A TPR1-domain of HOP; HOP 98.6 4.9E-08 1.7E-12 78.9 6.4 81 398-493 3-83 (118)
100 3urz_A Uncharacterized protein 98.6 5E-08 1.7E-12 89.1 6.3 95 399-493 4-99 (208)
101 4ga2_A E3 SUMO-protein ligase 98.6 2.4E-08 8.4E-13 86.2 3.8 75 406-495 4-78 (150)
102 2kck_A TPR repeat; tetratricop 98.6 9.9E-08 3.4E-12 76.3 7.0 81 400-495 7-89 (112)
103 2lni_A Stress-induced-phosphop 98.6 7.1E-08 2.4E-12 79.9 6.0 78 399-491 16-93 (133)
104 2kc7_A BFR218_protein; tetratr 98.5 1.2E-07 4.1E-12 74.9 6.5 70 402-486 3-73 (99)
105 2vyi_A SGTA protein; chaperone 98.5 1.6E-07 5.5E-12 77.2 7.2 84 394-492 7-90 (131)
106 3urz_A Uncharacterized protein 98.5 7.6E-08 2.6E-12 87.8 5.1 74 405-493 60-133 (208)
107 1wao_1 Serine/threonine protei 98.5 4.2E-08 1.4E-12 101.7 3.1 85 396-495 3-87 (477)
108 2xev_A YBGF; tetratricopeptide 98.5 1.2E-07 4.1E-12 78.6 5.1 83 401-495 4-89 (129)
109 3fp2_A TPR repeat-containing p 98.5 5E-08 1.7E-12 101.6 3.3 94 387-495 13-106 (537)
110 4i17_A Hypothetical protein; T 98.5 1.7E-07 5.9E-12 86.2 6.4 81 400-495 8-89 (228)
111 3sz7_A HSC70 cochaperone (SGT) 98.5 1.1E-07 3.9E-12 82.9 4.8 78 400-492 46-123 (164)
112 1elr_A TPR2A-domain of HOP; HO 98.5 1.6E-07 5.6E-12 77.3 5.5 83 398-495 3-92 (131)
113 3vtx_A MAMA; tetratricopeptide 98.4 1.1E-07 3.8E-12 84.3 4.6 75 401-492 109-183 (184)
114 4gyw_A UDP-N-acetylglucosamine 98.4 9.8E-08 3.3E-12 103.7 4.8 99 397-495 7-124 (723)
115 3k9i_A BH0479 protein; putativ 98.4 6.4E-08 2.2E-12 79.5 2.1 73 411-495 2-74 (117)
116 2gw1_A Mitochondrial precursor 98.4 1.5E-07 5E-12 97.2 5.0 85 395-495 2-86 (514)
117 2v5f_A Prolyl 4-hydroxylase su 98.4 6.9E-07 2.4E-11 71.9 7.7 81 401-489 7-87 (104)
118 1zu2_A Mitochondrial import re 98.4 6.1E-08 2.1E-12 83.8 0.9 72 409-495 12-93 (158)
119 2pl2_A Hypothetical conserved 98.3 1.9E-07 6.6E-12 85.7 3.5 80 400-494 6-85 (217)
120 2h6f_A Protein farnesyltransfe 98.3 1.7E-07 5.7E-12 94.2 3.1 93 401-493 133-245 (382)
121 3gyz_A Chaperone protein IPGC; 98.3 2.1E-07 7.3E-12 80.5 3.1 78 399-493 70-147 (151)
122 2h6f_A Protein farnesyltransfe 98.3 2.6E-07 8.8E-12 92.8 4.1 96 398-493 96-211 (382)
123 4gyw_A UDP-N-acetylglucosamine 98.3 3.2E-07 1.1E-11 99.6 4.9 97 400-496 44-159 (723)
124 2pl2_A Hypothetical conserved 98.3 5.7E-07 1.9E-11 82.5 5.2 79 401-495 120-198 (217)
125 3vtx_A MAMA; tetratricopeptide 98.3 4.3E-07 1.5E-11 80.4 4.2 79 399-492 5-83 (184)
126 2lni_A Stress-induced-phosphop 98.3 8.9E-07 3.1E-11 73.1 5.7 80 400-494 51-130 (133)
127 2hr2_A Hypothetical protein; a 98.3 1.1E-06 3.8E-11 76.0 6.4 77 399-483 57-137 (159)
128 3upv_A Heat shock protein STI1 98.3 4.5E-07 1.5E-11 75.0 3.7 79 400-493 39-123 (126)
129 2yhc_A BAMD, UPF0169 lipoprote 98.3 9.1E-07 3.1E-11 81.5 6.0 82 400-493 5-89 (225)
130 1hh8_A P67PHOX, NCF-2, neutrop 98.2 9.9E-07 3.4E-11 79.9 6.1 80 398-495 5-84 (213)
131 1hh8_A P67PHOX, NCF-2, neutrop 98.2 9.1E-07 3.1E-11 80.1 5.3 81 400-495 38-134 (213)
132 3k9i_A BH0479 protein; putativ 98.2 3.5E-06 1.2E-10 68.8 7.9 74 397-485 25-98 (117)
133 3ma5_A Tetratricopeptide repea 98.2 6.7E-07 2.3E-11 71.2 3.2 70 400-484 8-77 (100)
134 4i17_A Hypothetical protein; T 98.2 1.9E-06 6.3E-11 79.2 6.6 88 399-494 76-165 (228)
135 2vgx_A Chaperone SYCD; alterna 98.2 9.5E-07 3.3E-11 75.9 4.2 70 401-485 57-126 (148)
136 2xcb_A PCRH, regulatory protei 98.2 7.8E-07 2.7E-11 75.6 3.5 75 401-490 54-128 (142)
137 3rkv_A Putative peptidylprolyl 98.2 1.1E-06 3.6E-11 76.4 4.3 72 398-484 62-133 (162)
138 2vyi_A SGTA protein; chaperone 98.2 2.7E-06 9.2E-11 69.6 6.6 79 401-494 48-126 (131)
139 1na0_A Designed protein CTPR3; 98.2 3.5E-06 1.2E-10 68.3 7.1 47 448-494 77-123 (125)
140 3uq3_A Heat shock protein STI1 98.1 3.1E-06 1.1E-10 78.4 7.3 82 399-495 139-220 (258)
141 2fbn_A 70 kDa peptidylprolyl i 98.1 1.3E-06 4.6E-11 78.5 4.5 80 399-493 88-167 (198)
142 1elw_A TPR1-domain of HOP; HOP 98.1 4.5E-06 1.5E-10 67.0 7.2 77 401-492 40-116 (118)
143 1hxi_A PEX5, peroxisome target 98.1 2.4E-06 8.3E-11 70.6 4.7 70 399-483 51-120 (121)
144 2e2e_A Formate-dependent nitri 98.1 2.4E-06 8.1E-11 75.1 4.8 80 400-494 45-127 (177)
145 3qky_A Outer membrane assembly 98.1 3.1E-06 1E-10 79.6 5.9 84 399-494 15-101 (261)
146 1na0_A Designed protein CTPR3; 98.1 5.3E-06 1.8E-10 67.2 6.6 81 399-494 9-89 (125)
147 1zu2_A Mitochondrial import re 98.1 1.7E-06 5.9E-11 74.7 3.6 74 399-489 36-130 (158)
148 1xnf_A Lipoprotein NLPI; TPR, 98.1 5.8E-06 2E-10 77.5 7.5 83 398-495 42-124 (275)
149 4gcn_A Protein STI-1; structur 98.1 1.4E-05 4.6E-10 66.6 8.8 74 399-480 42-115 (127)
150 1ihg_A Cyclophilin 40; ppiase 98.1 2.4E-06 8.1E-11 85.4 4.7 80 399-493 273-352 (370)
151 3u3w_A Transcriptional activat 98.0 4.4E-06 1.5E-10 80.2 6.3 89 399-495 155-249 (293)
152 3uq3_A Heat shock protein STI1 98.0 3.3E-06 1.1E-10 78.2 5.1 83 397-495 3-92 (258)
153 2dba_A Smooth muscle cell asso 98.0 1E-05 3.6E-10 68.0 7.7 79 399-492 65-143 (148)
154 3ieg_A DNAJ homolog subfamily 98.0 2.7E-06 9.2E-11 82.8 4.4 81 399-494 3-83 (359)
155 2pzi_A Probable serine/threoni 98.0 2.9E-06 9.8E-11 91.9 4.3 79 401-494 435-513 (681)
156 3ieg_A DNAJ homolog subfamily 98.0 1.3E-05 4.4E-10 78.0 8.5 83 401-494 236-318 (359)
157 4eqf_A PEX5-related protein; a 98.0 6.4E-06 2.2E-10 81.2 6.1 81 400-495 66-146 (365)
158 3mkr_A Coatomer subunit epsilo 98.0 7.1E-06 2.4E-10 79.0 5.8 47 448-494 200-246 (291)
159 2y4t_A DNAJ homolog subfamily 97.9 1.7E-05 5.7E-10 80.3 8.1 83 401-494 259-341 (450)
160 3gty_X Trigger factor, TF; cha 97.9 1.2E-05 4.1E-10 81.6 6.7 88 52-159 154-241 (433)
161 2pzi_A Probable serine/threoni 97.9 2.1E-06 7.2E-11 92.9 1.1 94 401-494 469-580 (681)
162 2vsy_A XCC0866; transferase, g 97.9 4.5E-06 1.6E-10 88.1 3.5 95 400-494 24-137 (568)
163 1a17_A Serine/threonine protei 97.9 2.2E-05 7.4E-10 67.4 7.3 75 401-490 49-123 (166)
164 1qqe_A Vesicular transport pro 97.9 2.5E-05 8.4E-10 75.0 8.4 87 399-494 117-211 (292)
165 2kat_A Uncharacterized protein 97.9 9.3E-06 3.2E-10 65.8 4.6 64 417-495 3-66 (115)
166 4eqf_A PEX5-related protein; a 97.9 1.3E-05 4.5E-10 78.9 6.4 80 401-495 215-294 (365)
167 2y4t_A DNAJ homolog subfamily 97.9 1.7E-05 5.6E-10 80.4 7.3 84 397-495 24-107 (450)
168 1elr_A TPR2A-domain of HOP; HO 97.9 1.7E-05 5.7E-10 64.9 6.0 83 401-492 40-122 (131)
169 3u4t_A TPR repeat-containing p 97.9 6.1E-06 2.1E-10 77.4 3.7 76 402-492 77-153 (272)
170 2vq2_A PILW, putative fimbrial 97.9 2.6E-05 9E-10 70.3 7.6 79 399-492 8-86 (225)
171 2xev_A YBGF; tetratricopeptide 97.9 1.5E-05 5.2E-10 65.5 5.4 74 401-486 41-114 (129)
172 2fo7_A Synthetic consensus TPR 97.9 2.8E-05 9.4E-10 63.6 7.0 77 403-494 39-115 (136)
173 1fch_A Peroxisomal targeting s 97.8 7.1E-06 2.4E-10 80.6 3.8 80 400-494 65-144 (368)
174 4abn_A Tetratricopeptide repea 97.8 7.4E-06 2.5E-10 84.6 4.0 82 401-494 215-304 (474)
175 1wao_1 Serine/threonine protei 97.8 8.9E-06 3E-10 84.1 4.4 78 399-491 40-117 (477)
176 2e2e_A Formate-dependent nitri 97.8 2.9E-06 9.8E-11 74.6 0.5 77 400-491 11-87 (177)
177 4abn_A Tetratricopeptide repea 97.8 8.9E-06 3E-10 84.0 4.2 81 399-495 102-183 (474)
178 2kat_A Uncharacterized protein 97.8 9.5E-06 3.2E-10 65.8 3.5 68 400-482 20-87 (115)
179 1fch_A Peroxisomal targeting s 97.8 2.1E-05 7.3E-10 77.1 6.6 79 401-494 219-297 (368)
180 2fo7_A Synthetic consensus TPR 97.8 3E-05 1E-09 63.4 6.4 78 402-494 4-81 (136)
181 3qky_A Outer membrane assembly 97.8 2.2E-05 7.6E-10 73.6 6.3 94 401-494 91-197 (261)
182 2qfc_A PLCR protein; TPR, HTH, 97.8 2.1E-05 7.3E-10 75.3 6.2 89 399-495 155-249 (293)
183 3u4t_A TPR repeat-containing p 97.8 3.3E-05 1.1E-09 72.2 7.3 81 403-495 41-121 (272)
184 2kck_A TPR repeat; tetratricop 97.8 6.4E-05 2.2E-09 59.4 8.0 69 401-482 42-111 (112)
185 3as5_A MAMA; tetratricopeptide 97.8 3.3E-05 1.1E-09 67.1 6.8 47 448-494 110-156 (186)
186 1pc2_A Mitochondria fission pr 97.8 5.1E-05 1.8E-09 64.7 7.6 70 405-487 38-110 (152)
187 3as5_A MAMA; tetratricopeptide 97.8 3.7E-05 1.3E-09 66.8 6.8 34 449-482 145-178 (186)
188 1w3b_A UDP-N-acetylglucosamine 97.8 2.7E-05 9.1E-10 77.4 6.3 48 448-495 339-386 (388)
189 3q49_B STIP1 homology and U bo 97.7 1.8E-05 6E-10 65.9 3.8 67 400-481 44-110 (137)
190 3hym_B Cell division cycle pro 97.7 2.3E-05 7.9E-10 75.3 5.2 77 401-492 238-314 (330)
191 2q7f_A YRRB protein; TPR, prot 97.7 4.4E-05 1.5E-09 69.9 6.7 46 448-493 159-204 (243)
192 2q7f_A YRRB protein; TPR, prot 97.7 4.7E-05 1.6E-09 69.7 6.9 47 448-494 125-171 (243)
193 1qqe_A Vesicular transport pro 97.7 3.7E-05 1.3E-09 73.7 6.3 89 398-495 76-171 (292)
194 2vsy_A XCC0866; transferase, g 97.7 2.1E-05 7E-10 83.0 4.8 88 402-489 60-169 (568)
195 3ulq_A Response regulator aspa 97.7 4.7E-05 1.6E-09 75.7 7.2 90 397-495 182-277 (383)
196 3ro3_A PINS homolog, G-protein 97.7 3.9E-05 1.3E-09 64.9 5.6 74 397-479 7-80 (164)
197 3q15_A PSP28, response regulat 97.7 5.1E-05 1.7E-09 75.4 7.0 90 397-495 180-274 (378)
198 3hym_B Cell division cycle pro 97.7 4.2E-05 1.4E-09 73.5 6.1 88 401-494 195-282 (330)
199 2ho1_A Type 4 fimbrial biogene 97.7 1.8E-05 6.1E-10 73.3 3.3 95 399-493 37-152 (252)
200 3cv0_A Peroxisome targeting si 97.7 4.2E-05 1.4E-09 73.4 6.0 81 399-494 21-101 (327)
201 1w3b_A UDP-N-acetylglucosamine 97.7 2.5E-05 8.6E-10 77.6 4.2 94 400-493 68-180 (388)
202 3ma5_A Tetratricopeptide repea 97.7 1.6E-05 5.3E-10 63.1 2.2 50 446-495 5-54 (100)
203 3edt_B KLC 2, kinesin light ch 97.6 5.1E-05 1.7E-09 70.9 6.0 91 398-495 42-140 (283)
204 2ho1_A Type 4 fimbrial biogene 97.6 4.5E-05 1.5E-09 70.5 5.5 79 402-493 108-186 (252)
205 1xnf_A Lipoprotein NLPI; TPR, 97.6 3.6E-05 1.2E-09 71.9 4.8 80 405-495 11-90 (275)
206 2vq2_A PILW, putative fimbrial 97.6 3.8E-05 1.3E-09 69.2 4.8 79 402-493 79-158 (225)
207 2ifu_A Gamma-SNAP; membrane fu 97.6 6.7E-05 2.3E-09 72.5 6.3 85 399-493 116-206 (307)
208 2r5s_A Uncharacterized protein 97.6 2.7E-05 9.1E-10 68.5 3.1 69 400-484 7-75 (176)
209 3cv0_A Peroxisome targeting si 97.6 9E-05 3.1E-09 71.0 6.9 80 401-495 174-253 (327)
210 4a1s_A PINS, partner of inscut 97.6 5.6E-05 1.9E-09 75.4 5.7 86 396-492 45-136 (411)
211 3edt_B KLC 2, kinesin light ch 97.6 5.6E-05 1.9E-09 70.6 5.3 91 397-494 83-181 (283)
212 2yhc_A BAMD, UPF0169 lipoprote 97.6 7.2E-05 2.4E-09 68.6 5.7 88 408-495 105-197 (225)
213 3ro3_A PINS homolog, G-protein 97.5 0.00014 4.7E-09 61.4 6.2 86 399-493 49-140 (164)
214 3ro2_A PINS homolog, G-protein 97.5 0.0001 3.6E-09 70.4 5.6 93 400-492 6-133 (338)
215 3qou_A Protein YBBN; thioredox 97.5 5.6E-05 1.9E-09 72.4 3.6 80 400-494 118-231 (287)
216 3ulq_A Response regulator aspa 97.4 0.0002 6.8E-09 71.1 7.2 90 398-495 142-237 (383)
217 2c2l_A CHIP, carboxy terminus 97.4 6.2E-05 2.1E-09 71.8 3.2 70 400-484 39-108 (281)
218 3n71_A Histone lysine methyltr 97.4 0.00016 5.4E-09 74.7 6.4 95 393-494 303-405 (490)
219 2xpi_A Anaphase-promoting comp 97.4 0.00024 8E-09 74.7 7.7 80 400-494 517-596 (597)
220 3gw4_A Uncharacterized protein 97.4 0.00016 5.6E-09 64.1 5.5 87 398-493 25-118 (203)
221 3sf4_A G-protein-signaling mod 97.4 0.00013 4.4E-09 72.2 5.3 29 400-428 10-38 (406)
222 2ifu_A Gamma-SNAP; membrane fu 97.4 0.00011 3.9E-09 70.8 4.4 87 399-495 76-168 (307)
223 3gty_X Trigger factor, TF; cha 97.3 0.00027 9.2E-09 71.6 7.0 74 285-383 154-227 (433)
224 3nf1_A KLC 1, kinesin light ch 97.3 0.00015 5.3E-09 68.8 4.7 94 395-495 23-124 (311)
225 3nf1_A KLC 1, kinesin light ch 97.3 0.00021 7.2E-09 67.8 5.3 90 398-494 110-207 (311)
226 3qww_A SET and MYND domain-con 97.3 0.00028 9.5E-09 71.7 6.2 95 394-495 293-395 (433)
227 3fp2_A TPR repeat-containing p 97.3 0.00016 5.3E-09 74.8 4.4 79 401-494 312-390 (537)
228 2l6j_A TPR repeat-containing p 97.2 0.00015 5.2E-09 57.5 3.2 48 448-495 4-51 (111)
229 4g1t_A Interferon-induced prot 97.2 0.00015 5.1E-09 73.9 3.4 84 402-492 97-182 (472)
230 4g1t_A Interferon-induced prot 97.2 0.00012 4.1E-09 74.5 2.6 85 402-492 54-146 (472)
231 3sf4_A G-protein-signaling mod 97.2 0.00047 1.6E-08 68.1 6.5 86 399-493 187-278 (406)
232 3qww_A SET and MYND domain-con 97.1 0.0006 2.1E-08 69.2 6.8 76 396-478 337-412 (433)
233 2gw1_A Mitochondrial precursor 97.1 0.00024 8.3E-09 72.7 3.7 82 404-494 377-461 (514)
234 3qou_A Protein YBBN; thioredox 97.1 0.00015 5.1E-09 69.3 1.8 95 400-494 152-267 (287)
235 3qwp_A SET and MYND domain-con 97.1 0.00057 2E-08 69.4 6.1 92 396-494 284-383 (429)
236 1dce_A Protein (RAB geranylger 97.1 0.00033 1.1E-08 73.8 4.4 78 401-493 65-154 (567)
237 4a1s_A PINS, partner of inscut 97.0 0.00042 1.4E-08 69.0 4.9 87 399-494 86-178 (411)
238 2r5s_A Uncharacterized protein 97.0 0.00023 7.8E-09 62.4 2.4 96 398-494 39-156 (176)
239 3u3w_A Transcriptional activat 97.0 0.00081 2.8E-08 64.1 6.5 85 401-494 117-208 (293)
240 3q15_A PSP28, response regulat 97.0 0.00082 2.8E-08 66.6 6.7 84 402-494 104-194 (378)
241 1na3_A Designed protein CTPR2; 97.0 0.00039 1.3E-08 52.8 3.3 49 447-495 8-56 (91)
242 2qfc_A PLCR protein; TPR, HTH, 97.0 0.0015 5.1E-08 62.2 7.8 82 405-495 121-209 (293)
243 1ouv_A Conserved hypothetical 96.9 0.0012 4.2E-08 61.8 6.8 44 448-493 74-121 (273)
244 3ro2_A PINS homolog, G-protein 96.9 0.00093 3.2E-08 63.6 6.0 86 399-493 183-274 (338)
245 3n71_A Histone lysine methyltr 96.9 0.0012 4.1E-08 68.1 6.8 75 396-477 348-422 (490)
246 2ond_A Cleavage stimulation fa 96.8 0.0013 4.4E-08 63.3 6.0 63 415-492 80-144 (308)
247 1nzn_A CGI-135 protein, fissio 96.8 0.0024 8.1E-08 52.5 6.6 41 446-486 72-112 (126)
248 3gw4_A Uncharacterized protein 96.8 0.0021 7.3E-08 56.7 6.9 73 398-478 65-137 (203)
249 4f3v_A ESX-1 secretion system 96.8 0.00095 3.2E-08 63.3 4.6 82 401-495 137-221 (282)
250 3qwp_A SET and MYND domain-con 96.8 0.0016 5.6E-08 66.0 6.6 77 394-477 324-400 (429)
251 2xpi_A Anaphase-promoting comp 96.8 0.0016 5.5E-08 68.2 6.8 92 402-493 376-486 (597)
252 3bee_A Putative YFRE protein; 96.8 0.0018 6.3E-08 50.4 5.4 66 401-481 8-76 (93)
253 1dce_A Protein (RAB geranylger 96.8 0.00077 2.6E-08 71.0 4.2 88 393-495 22-120 (567)
254 2kc7_A BFR218_protein; tetratr 96.7 0.00054 1.8E-08 53.3 2.0 45 451-495 3-48 (99)
255 3mkr_A Coatomer subunit epsilo 96.7 0.0015 5.1E-08 62.5 5.6 68 402-484 203-271 (291)
256 3rjv_A Putative SEL1 repeat pr 96.7 0.002 6.9E-08 58.3 5.9 76 404-493 90-173 (212)
257 3o48_A Mitochondria fission 1 96.7 0.0019 6.5E-08 53.2 5.0 41 446-486 76-116 (134)
258 3dra_A Protein farnesyltransfe 96.6 0.0014 5E-08 63.1 4.8 68 410-492 43-113 (306)
259 3dra_A Protein farnesyltransfe 96.6 0.00095 3.2E-08 64.4 3.2 95 400-494 68-192 (306)
260 1ouv_A Conserved hypothetical 96.6 0.0023 7.9E-08 59.8 5.7 45 448-494 110-158 (273)
261 3rjv_A Putative SEL1 repeat pr 96.4 0.0026 9E-08 57.5 4.5 96 399-494 18-137 (212)
262 1y8m_A FIS1; mitochondria, unk 96.4 0.0032 1.1E-07 52.6 4.5 39 447-485 76-114 (144)
263 2ond_A Cleavage stimulation fa 96.3 0.0027 9.2E-08 60.9 4.3 68 404-485 104-171 (308)
264 3dss_A Geranylgeranyl transfer 96.2 0.0021 7.2E-08 62.6 3.2 91 403-493 33-155 (331)
265 3q7a_A Farnesyltransferase alp 96.2 0.0021 7E-08 63.0 3.0 46 447-492 122-169 (349)
266 3dss_A Geranylgeranyl transfer 96.1 0.0029 1E-07 61.6 3.6 80 415-494 90-191 (331)
267 3ffl_A Anaphase-promoting comp 96.0 0.017 5.7E-07 49.6 7.5 76 399-474 63-148 (167)
268 3q7a_A Farnesyltransferase alp 96.0 0.0046 1.6E-07 60.5 4.2 68 412-494 67-135 (349)
269 1hz4_A MALT regulatory protein 95.9 0.0098 3.3E-07 58.3 6.4 72 402-480 96-167 (373)
270 1hz4_A MALT regulatory protein 95.8 0.0095 3.2E-07 58.4 5.8 86 399-493 53-146 (373)
271 1klx_A Cysteine rich protein B 95.8 0.0076 2.6E-07 50.4 4.4 69 405-492 31-103 (138)
272 4f3v_A ESX-1 secretion system 95.6 0.014 4.8E-07 55.3 5.9 72 401-486 173-245 (282)
273 4b4t_Q 26S proteasome regulato 95.5 0.013 4.4E-07 58.5 5.6 83 402-484 7-91 (434)
274 1klx_A Cysteine rich protein B 95.3 0.032 1.1E-06 46.5 6.6 69 402-489 60-136 (138)
275 3ffl_A Anaphase-promoting comp 94.5 0.14 4.7E-06 43.9 8.2 70 401-477 22-92 (167)
276 2ff4_A Probable regulatory pro 94.5 0.12 4.2E-06 51.3 9.2 95 398-492 114-215 (388)
277 4b4t_Q 26S proteasome regulato 94.4 0.026 8.7E-07 56.3 4.3 70 401-479 137-206 (434)
278 2ooe_A Cleavage stimulation fa 94.4 0.044 1.5E-06 56.6 6.1 66 412-492 292-366 (530)
279 2xm6_A Protein corresponding t 94.2 0.063 2.2E-06 54.9 6.8 45 448-492 399-450 (490)
280 2v6y_A AAA family ATPase, P60 93.9 0.08 2.7E-06 40.0 5.0 42 390-431 1-43 (83)
281 1b89_A Protein (clathrin heavy 93.9 0.021 7E-07 57.6 2.2 51 401-474 124-174 (449)
282 2ooe_A Cleavage stimulation fa 93.8 0.1 3.4E-06 53.9 7.3 64 410-489 23-86 (530)
283 3e4b_A ALGK; tetratricopeptide 93.7 0.03 1E-06 56.9 3.1 89 403-493 180-294 (452)
284 1b89_A Protein (clathrin heavy 93.4 0.2 6.8E-06 50.4 8.4 97 394-492 143-251 (449)
285 1xi4_A Clathrin heavy chain; a 93.2 0.052 1.8E-06 61.8 4.1 88 403-495 1053-1147(1630)
286 1xi4_A Clathrin heavy chain; a 93.2 0.086 2.9E-06 60.1 5.8 18 314-331 321-338 (1630)
287 3bee_A Putative YFRE protein; 93.0 0.053 1.8E-06 41.9 2.7 47 448-494 6-55 (93)
288 2xm6_A Protein corresponding t 92.5 0.18 6.1E-06 51.4 6.8 91 401-493 41-158 (490)
289 2cpt_A SKD1 protein, vacuolar 92.3 0.28 9.6E-06 39.5 6.2 69 389-457 7-78 (117)
290 3e4b_A ALGK; tetratricopeptide 92.0 0.11 3.9E-06 52.6 4.5 61 411-492 263-328 (452)
291 2v6x_A Vacuolar protein sortin 91.2 0.31 1.1E-05 36.8 5.1 42 390-431 4-45 (85)
292 4gns_B Protein CSD3, chitin bi 91.1 0.32 1.1E-05 52.4 6.9 59 401-474 339-397 (754)
293 3mv2_B Coatomer subunit epsilo 90.9 0.16 5.4E-06 48.7 3.9 61 413-489 192-262 (310)
294 2w2u_A Hypothetical P60 katani 90.9 0.29 1E-05 36.8 4.6 43 389-431 8-51 (83)
295 3ly7_A Transcriptional activat 90.7 0.31 1.1E-05 47.7 5.9 62 405-482 283-344 (372)
296 1wfd_A Hypothetical protein 15 90.4 0.63 2.2E-05 35.8 6.3 65 394-458 10-75 (93)
297 1pc2_A Mitochondria fission pr 90.1 0.037 1.3E-06 47.0 -1.2 68 413-495 12-84 (152)
298 4a5x_A MITD1, MIT domain-conta 89.8 0.74 2.5E-05 34.8 6.1 60 397-456 14-74 (86)
299 3u64_A Protein TP_0956; tetrat 89.4 0.32 1.1E-05 45.9 4.5 47 447-493 198-250 (301)
300 3mv2_B Coatomer subunit epsilo 88.0 0.22 7.5E-06 47.7 2.5 63 404-479 105-167 (310)
301 3mv2_A Coatomer subunit alpha; 86.6 4.4 0.00015 38.5 10.4 83 399-481 114-240 (325)
302 2crb_A Nuclear receptor bindin 86.2 1.9 6.5E-05 32.6 6.1 42 396-437 12-53 (97)
303 3u64_A Protein TP_0956; tetrat 84.6 0.47 1.6E-05 44.7 2.7 64 402-480 202-272 (301)
304 2v5f_A Prolyl 4-hydroxylase su 82.9 0.47 1.6E-05 37.0 1.7 47 449-495 6-59 (104)
305 3mkr_B Coatomer subunit alpha; 82.5 9.4 0.00032 36.2 10.7 30 401-430 104-133 (320)
306 2vkj_A TM1634; membrane protei 77.7 8.8 0.0003 28.7 6.8 32 397-428 51-82 (106)
307 3ly7_A Transcriptional activat 76.6 2.1 7.1E-05 41.8 4.3 41 451-492 280-320 (372)
308 2wb7_A PT26-6P; extra chromoso 76.4 2.9 9.8E-05 41.8 5.2 43 391-433 421-466 (526)
309 2dl1_A Spartin; SPG20, MIT, st 72.0 12 0.0004 29.7 6.8 74 395-468 18-98 (116)
310 4gns_B Protein CSD3, chitin bi 71.8 6.2 0.00021 42.4 6.9 48 448-495 337-384 (754)
311 3mkq_A Coatomer beta'-subunit; 69.9 6.3 0.00022 42.3 6.7 74 401-475 683-763 (814)
312 1zbp_A Hypothetical protein VP 69.5 3.4 0.00012 38.3 3.7 68 406-488 4-73 (273)
313 2ymb_A MITD1, MIT domain-conta 68.1 1.1 3.6E-05 41.3 0.0 65 393-457 17-82 (257)
314 3txn_A 26S proteasome regulato 67.7 12 0.0004 36.9 7.4 66 404-478 104-169 (394)
315 3ax2_A Mitochondrial import re 67.2 6.8 0.00023 28.4 4.1 40 392-431 10-49 (73)
316 4b4t_R RPN7, 26S proteasome re 67.0 3.4 0.00012 41.4 3.5 65 401-477 133-197 (429)
317 1om2_A Protein (mitochondrial 57.6 20 0.00069 27.3 5.4 41 391-431 12-52 (95)
318 2npm_A 14-3-3 domain containin 56.2 23 0.00077 32.6 6.6 53 416-476 173-226 (260)
319 2br9_A 14-3-3E, 14-3-3 protein 56.1 18 0.00061 32.7 5.8 54 416-476 147-201 (234)
320 2o8p_A 14-3-3 domain containin 52.8 13 0.00043 33.5 4.2 60 411-477 137-197 (227)
321 3uzd_A 14-3-3 protein gamma; s 52.4 22 0.00076 32.3 5.8 55 415-476 147-202 (248)
322 1o9d_A 14-3-3-like protein C; 52.2 22 0.00075 32.6 5.8 54 416-476 152-206 (260)
323 3ubw_A 14-3-3E, 14-3-3 protein 51.4 23 0.0008 32.4 5.8 54 416-476 173-227 (261)
324 2ff4_A Probable regulatory pro 49.5 23 0.00079 34.6 6.0 60 400-474 172-231 (388)
325 2zan_A Vacuolar protein sortin 48.1 3.8 0.00013 41.2 0.0 39 394-432 6-44 (444)
326 3iqu_A 14-3-3 protein sigma; s 48.0 28 0.00095 31.4 5.7 55 415-476 149-204 (236)
327 3kae_A CDC27, possible protein 47.1 36 0.0012 29.2 5.8 25 451-475 65-89 (242)
328 2crb_A Nuclear receptor bindin 46.7 25 0.00085 26.5 4.2 30 447-476 14-43 (97)
329 3efz_A 14-3-3 protein; 14-3-3, 44.2 27 0.00091 32.1 5.0 58 415-477 168-226 (268)
330 1nzn_A CGI-135 protein, fissio 40.6 8 0.00027 31.3 0.8 69 412-495 14-87 (126)
331 3eab_A Spastin; spastin, MIT, 40.5 83 0.0028 23.6 6.3 66 397-462 14-86 (89)
332 4e6h_A MRNA 3'-END-processing 38.8 66 0.0023 34.0 7.8 62 410-486 77-143 (679)
333 2uy1_A Cleavage stimulation fa 37.8 45 0.0015 33.7 6.2 38 448-486 213-250 (493)
334 3myv_A SUSD superfamily protei 34.5 42 0.0014 33.5 5.3 30 448-477 190-219 (454)
335 3mcx_A SUSD superfamily protei 32.8 47 0.0016 33.3 5.4 30 448-477 202-231 (477)
336 2jpu_A ORF C02003 protein; sol 32.7 25 0.00085 28.5 2.5 32 397-428 5-36 (129)
337 3kez_A Putative sugar binding 32.3 46 0.0016 33.3 5.1 30 448-477 196-225 (461)
338 3mkq_B Coatomer subunit alpha; 31.8 87 0.003 26.8 6.0 30 399-428 34-63 (177)
339 4e6h_A MRNA 3'-END-processing 31.7 50 0.0017 35.0 5.5 52 411-477 355-407 (679)
340 1ya0_A SMG-7 transcript varian 31.5 79 0.0027 32.0 6.7 64 402-480 155-218 (497)
341 3jys_A SUSD superfamily protei 31.0 1E+02 0.0035 31.1 7.5 33 443-476 190-222 (499)
342 2cfu_A SDSA1; SDS-hydrolase, l 30.7 23 0.00079 37.4 2.7 47 449-495 450-496 (658)
343 2yhe_A SEC-alkyl sulfatase; hy 36.2 11 0.00037 40.0 0.0 48 449-496 462-509 (668)
344 2oo2_A Hypothetical protein AF 28.3 87 0.003 23.3 4.7 38 392-429 28-65 (86)
345 2pmr_A Uncharacterized protein 27.8 92 0.0031 23.2 4.7 38 392-429 32-69 (87)
346 2uy1_A Cleavage stimulation fa 27.1 63 0.0022 32.5 5.1 35 396-430 11-45 (493)
347 4gq2_M Nucleoporin NUP120; bet 26.6 88 0.003 34.5 6.6 79 404-482 845-932 (950)
348 3mkq_A Coatomer beta'-subunit; 26.4 64 0.0022 34.2 5.4 27 448-474 681-707 (814)
349 2yin_A DOCK2, dedicator of cyt 25.5 91 0.0031 30.9 5.8 73 405-477 41-121 (436)
350 4h7y_A Dual specificity protei 24.6 92 0.0032 26.0 4.7 53 413-480 74-126 (161)
351 3htx_A HEN1; HEN1, small RNA m 24.2 1.2E+02 0.0041 33.0 6.6 59 51-113 559-649 (950)
352 4a5x_A MITD1, MIT domain-conta 24.2 1E+02 0.0036 22.7 4.5 28 449-476 17-44 (86)
353 4h7y_A Dual specificity protei 24.0 98 0.0033 25.9 4.7 87 391-486 12-98 (161)
354 2rkl_A Vacuolar protein sortin 23.1 1.1E+02 0.0037 20.5 3.9 39 391-429 12-50 (53)
355 3snx_A SUSD homolog, putative 21.0 1.1E+02 0.0036 30.6 5.3 30 448-477 191-220 (460)
356 2xze_A STAM-binding protein; h 20.7 1.3E+02 0.0045 24.7 4.9 41 389-429 30-70 (146)
357 3lew_A SUSD-like carbohydrate 20.7 87 0.003 31.6 4.7 30 448-477 203-232 (495)
358 3isy_A Bsupi, intracellular pr 20.3 2.9E+02 0.0099 21.8 6.7 33 55-87 16-48 (120)
359 3jq1_A SUSD superfamily protei 20.2 85 0.0029 31.5 4.4 28 449-476 181-208 (481)
360 2w2u_A Hypothetical P60 katani 20.2 1.2E+02 0.0039 22.3 4.0 26 451-476 22-47 (83)
No 1
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=1.3e-68 Score=535.74 Aligned_cols=354 Identities=81% Similarity=1.271 Sum_probs=223.4
Q ss_pred cCceeeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCc
Q 011003 28 VGEEKEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGE 107 (496)
Q Consensus 28 ~~~~~~~~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge 107 (496)
++++..++++||+|+++++|+|+..|+.||.|.+||++++.||++|++|+.+++|+.|.+|.+++++||+++|.+|++|+
T Consensus 2 ~~~~~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~gm~~Ge 81 (356)
T 3jxv_A 2 VGEENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGE 81 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCccceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCCCcEEEEeCCCccchHHHHHHhcCCCCC
Confidence 56677889999999999999997789999999999999999999999999888999999999999999999999999999
Q ss_pred EEEEEecCCcccCCCCCCCCCCCCCceEEEEEEEEEeecceeccCccceeEeeeccccccCCCCCCeEEEEEEEEeCCCc
Q 011003 108 NAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGM 187 (496)
Q Consensus 108 ~~~i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~~d~~~~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~ 187 (496)
+++|+|||++|||..+.++.||+|++|+|+|+|++|.++.++..|+.+.+++++.|.|+.+|..+|.|++||+++++||+
T Consensus 82 ~~~~~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dgt 161 (356)
T 3jxv_A 82 NALFTIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGT 161 (356)
T ss_dssp ------------------------------------CCEEETTSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSC
T ss_pred EEEEEEChHHhCCCCCCCCCcCCCCEEEEEeeEEeeecccccccCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCCC
Confidence 99999999999999998889999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccceEEEecCCCCcchHHHHHhccccCcEEEEEecCCCccCCCCCCCCCCCCCCCCCceEEEEEEeeeecceeeec
Q 011003 188 VVGKADGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEIT 267 (496)
Q Consensus 188 ~~~~~~~~~~~~g~~~~~~gl~~~l~~m~~ge~~~v~vp~~~~~g~~~~~~~~~~~~i~~~~~l~~ev~l~~~~~~~d~~ 267 (496)
+|+++.++.|.+|.+++++||+++|.+|++||+++++|||+++||+.|++..+....||++++|+|+|+|++|..+.+++
T Consensus 162 ~~~~~~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv~ 241 (356)
T 3jxv_A 162 VVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIG 241 (356)
T ss_dssp EEEEEEEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEES
T ss_pred EEeccCCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccccc
Confidence 99999999999999999999999999999999999999999999999998777777899999999999999999999999
Q ss_pred cCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEEE
Q 011003 268 DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLT 347 (496)
Q Consensus 268 ~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~ 347 (496)
.|.+++++++++|+|..+|..|+.|+|||.+++.||++|+++.. ...+|+.|.+|.+++++||+.+|.+|++||+++|+
T Consensus 242 ~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~-~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~ 320 (356)
T 3jxv_A 242 DDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGH-DEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVT 320 (356)
T ss_dssp TTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESC-TTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEE
T ss_pred cccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccc-cCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEE
Confidence 99999999999999988999999999999999999999998743 35789999999999999999999999999999999
Q ss_pred EcCCCccCCccccccccCCCCCCeEEEEEEEeeeec
Q 011003 348 IAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (496)
Q Consensus 348 i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~~ 383 (496)
|||++|||+.+... ...||++++|+|+|+|+++.+
T Consensus 321 ip~~~aYG~~~~~~-~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 321 IPPEYAYGSTESKQ-DAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp ECGGGTTTTSCEES-SSEECTTCCEEEEEEEEEEEC
T ss_pred EChHHccCCCCcCC-CCcCCcCCeEEEEEEEEEEEc
Confidence 99999999987532 356999999999999999874
No 2
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=5e-51 Score=424.41 Aligned_cols=333 Identities=40% Similarity=0.711 Sum_probs=285.0
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEec
Q 011003 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (496)
Q Consensus 35 ~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip 114 (496)
+++||+|+++++|+|...|..||.|.|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++|+||
T Consensus 29 ~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i~ 108 (457)
T 1kt0_A 29 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCK 108 (457)
T ss_dssp ----CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEEC
Confidence 68899999999999955599999999999999989999999988788999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCCCceEEEEEEEEEeecceeccCccceeEeeeccccccCCCCCCeEEEEEEEEeCCCceeeeccc
Q 011003 115 PELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKADG 194 (496)
Q Consensus 115 ~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~~d~~~~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~~ 194 (496)
|+++||..+.++.||++++++|+|+|+++...
T Consensus 109 ~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~~------------------------------------------------ 140 (457)
T 1kt0_A 109 PEYAYGSAGSLPKIPSNATLFFEIELLDFKGE------------------------------------------------ 140 (457)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE------------------------------------------------
T ss_pred hHHhccccCCCCCCCCCCcEEEEEeeceeecc------------------------------------------------
Confidence 99999999987889999999999999887420
Q ss_pred eEEEecCCCCcchHHHHHhccccCcEEEEEecCCCccCCCCCCCCCCCCCCCCCceEEEEEEeeeecceeeeccCcceEE
Q 011003 195 VEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEITDDKKVIK 274 (496)
Q Consensus 195 ~~~~~g~~~~~~gl~~~l~~m~~ge~~~v~vp~~~~~g~~~~~~~~~~~~i~~~~~l~~ev~l~~~~~~~d~~~d~~~~k 274 (496)
++..|+++++
T Consensus 141 ----------------------------------------------------------------------~~~~dg~~~k 150 (457)
T 1kt0_A 141 ----------------------------------------------------------------------DLFEDGGIIR 150 (457)
T ss_dssp ----------------------------------------------------------------------ETTSSSSEEE
T ss_pred ----------------------------------------------------------------------cccCCcceEE
Confidence 0112456778
Q ss_pred EEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCcc---chhhHHHHHHhccccCcEEEEEEcCC
Q 011003 275 KILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEE---QVIDGLDRAVITMKKNEVALLTIAPE 351 (496)
Q Consensus 275 ~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~---~~~~gle~~l~~M~~Ge~~~v~i~~~ 351 (496)
+++++|.|..+|..|+.|++||.+++ +|++|+++ ++.|.+|+| .++++|+.|+..|+.||++.+.++|.
T Consensus 151 ~i~~~g~~~~~p~~g~~V~v~y~g~~-~g~~f~~~-------~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~ 222 (457)
T 1kt0_A 151 RTKRKGEGYSNPNEGATVEIHLEGRC-GGRMFDCR-------DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPR 222 (457)
T ss_dssp EEEECCBCSCCCCTTCEEEEEEEEEE-TTEEEEEE-------EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGG
T ss_pred EEEecCCCCCCCCCCCEEEEEEEEEe-CCeEEecC-------ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcc
Confidence 88889998889999999999999999 89999753 589999977 48999999999999999999999999
Q ss_pred CccCCccccccccCCCCCCeEEEEEEEeeeeccccccccChHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhcc
Q 011003 352 YAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (496)
Q Consensus 352 ~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~~~~~~~~~~~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~ 431 (496)
++|+..+... ..||+++.+.|++.|.++.+....|.+..+++...+..++.+|+.+|+.|+|.+|+..|++|+++.+.
T Consensus 223 ~ay~~~g~~~--~~ip~~~~l~y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~ 300 (457)
T 1kt0_A 223 YGFGEAGKPK--FGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM 300 (457)
T ss_dssp GTTCSSCBGG--GTBCTTCCEEEEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCCcc--cCCCCCCEEEEEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc
Confidence 9999988753 46999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhcccccccccc
Q 011003 432 DTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
...+.+++..++.+....+|+|+|.||+++++|.+|+.+|++||+++|+|++|||++|.+|+.+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~ 364 (457)
T 1kt0_A 301 EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLM 364 (457)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHc
Confidence 7667777888889999999999999999999999999999999999999999999999998765
No 3
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=4.6e-40 Score=316.28 Aligned_cols=234 Identities=42% Similarity=0.718 Sum_probs=208.9
Q ss_pred cccccCceeee--cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHc
Q 011003 24 PMMKVGEEKEI--GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIK 101 (496)
Q Consensus 24 ~~~~~~~~~~~--~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~ 101 (496)
++.......+. +++||+|+++++|+|...|+.||.|.|||++++.||++|+++++++.|+.|.+|.+++++||+++|.
T Consensus 36 ~~~~~~~~di~~~~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~ 115 (280)
T 1q1c_A 36 APLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIA 115 (280)
T ss_dssp -----CCEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHT
T ss_pred cccCccccccccCCCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHh
Confidence 34445555555 6889999999999996559999999999999999999999998777899999999999999999999
Q ss_pred cCcCCcEEEEEecCCcccCCCCCCCCCCCCCceEEEEEEEEEeecceec--cCccceeEeeeccccccCCCCCCeEEEEE
Q 011003 102 TMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDIC--KDGGIIKKILKEGEKWENPKDLDEVLVNY 179 (496)
Q Consensus 102 ~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~--~d~~~~k~i~~~g~g~~~~~~~d~V~v~y 179 (496)
+|++|++++|.|||++|||..+.++.||++++++|+|+|+++... ++. .++.+.+++++.|+|...|..||.|++||
T Consensus 116 gm~~Ge~~~v~ipp~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~~-~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~y 194 (280)
T 1q1c_A 116 TMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKGE-DLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVAL 194 (280)
T ss_dssp TCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE-ECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEEE
T ss_pred cCCCCCEEEEEECcHHhCCCcCccCCCCCCCcEEEEEEeeeeccc-ccccccccceeEEeeecccccccccCCceEEEEE
Confidence 999999999999999999999988899999999999999999863 454 67889999999999988899999999999
Q ss_pred EEEeCCCceeeeccceEEEecCCC---CcchHHHHHhccccCcEEEEEecCCCccCCCCCCCCCCCCCCCCCceEEEEEE
Q 011003 180 EARLEDGMVVGKADGVEFTVKDGH---FCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALE 256 (496)
Q Consensus 180 ~~~~~~g~~~~~~~~~~~~~g~~~---~~~gl~~~l~~m~~ge~~~v~vp~~~~~g~~~~~~~~~~~~i~~~~~l~~ev~ 256 (496)
++++ +|++|++ +++.|.+|.+. +++||+++|.+|++||+++++|||+++||+.+.+ ...||++++++|+|+
T Consensus 195 ~g~~-dG~~fd~-~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~----~~~IP~~~~l~f~V~ 268 (280)
T 1q1c_A 195 EGYY-KDKLFDQ-RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKE----KFQIPPNAELKYELH 268 (280)
T ss_dssp EEEE-TTEEEEE-EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBG----GGTBCTTCCEEEEEE
T ss_pred EEEe-CCEEEec-CCeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCc----cCccCCCCeEEEEEE
Confidence 9999 8888887 68999999998 5999999999999999999999999999988754 236999999999999
Q ss_pred eeeeccee
Q 011003 257 LVSWKTVS 264 (496)
Q Consensus 257 l~~~~~~~ 264 (496)
|+++...+
T Consensus 269 L~~i~~~~ 276 (280)
T 1q1c_A 269 LKSFEKAK 276 (280)
T ss_dssp EEEEECCC
T ss_pred EEEEeCCC
Confidence 99987544
No 4
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=4.8e-37 Score=295.26 Aligned_cols=223 Identities=37% Similarity=0.671 Sum_probs=202.0
Q ss_pred cCccceeEeeeccccccCCCCCCeEEEEEEEEeCCCceeeec----cceEEEecCCCCcchHHHHHhccccCcEEEEEec
Q 011003 151 KDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKA----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVK 226 (496)
Q Consensus 151 ~d~~~~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~----~~~~~~~g~~~~~~gl~~~l~~m~~ge~~~v~vp 226 (496)
.++++.+++++.|.|..+|..+|.|++||++++.+|++|+++ +++.|.+|.+.+++||+++|.+|++||+++++||
T Consensus 49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ip 128 (280)
T 1q1c_A 49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCK 128 (280)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEEEEC
Confidence 578899999999999878999999999999999999999986 5899999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCCCCCCCCCceEEEEEEeeeecceeeec--cCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCc
Q 011003 227 PQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEIT--DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGT 304 (496)
Q Consensus 227 ~~~~~g~~~~~~~~~~~~i~~~~~l~~ev~l~~~~~~~d~~--~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~ 304 (496)
|++|||+.+.+ ..||++++|+|+|+|+++.. .++. .|++++++++++|+|...|..|+.|+|||.+++ +|+
T Consensus 129 p~~aYG~~g~~-----~~Ip~~~~lvf~Vel~~i~~-~~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG~ 201 (280)
T 1q1c_A 129 PEYAYGSAGSP-----PKIPPNATLVFEVELFEFKG-EDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDK 201 (280)
T ss_dssp GGGTTTTTCBT-----TTBCTTCCEEEEEEEEEEEC-EECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TTE
T ss_pred cHHhCCCcCcc-----CCCCCCCcEEEEEEeeeecc-cccccccccceeEEeeecccccccccCCceEEEEEEEEe-CCE
Confidence 99999998764 57999999999999999875 3566 788999999999999768999999999999998 899
Q ss_pred EEEEcCCCCCcccEEEEcCccc---hhhHHHHHHhccccCcEEEEEEcCCCccCCccccccccCCCCCCeEEEEEEEeee
Q 011003 305 VFVKKGHSEEEQLFEFKTDEEQ---VIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (496)
Q Consensus 305 ~~~~~~~~~~~~~~~~~lg~~~---~~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~ 381 (496)
+|++ .++.|.+|.++ +++||+.+|.+|++||+++|+|||+++||..+.+. -.||++++++|+|+|+++
T Consensus 202 ~fd~-------~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~--~~IP~~~~l~f~V~L~~i 272 (280)
T 1q1c_A 202 LFDQ-------RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEK--FQIPPNAELKYELHLKSF 272 (280)
T ss_dssp EEEE-------EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGG--GTBCTTCCEEEEEEEEEE
T ss_pred EEec-------CCeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCcc--CccCCCCeEEEEEEEEEE
Confidence 9975 48999999998 59999999999999999999999999999887542 259999999999999999
Q ss_pred eccccccc
Q 011003 382 EKEKESWD 389 (496)
Q Consensus 382 ~~~~~~~~ 389 (496)
.+.++.|+
T Consensus 273 ~~~~~~W~ 280 (280)
T 1q1c_A 273 EKAKESWE 280 (280)
T ss_dssp ECCCC---
T ss_pred eCCCCCCC
Confidence 99888874
No 5
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=1.7e-36 Score=303.17 Aligned_cols=220 Identities=39% Similarity=0.690 Sum_probs=205.5
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEec
Q 011003 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (496)
Q Consensus 35 ~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip 114 (496)
.+.++.++++++|+|+..|..||.|.+||++++.||++|+++. ++.|.+|.+++++||+.+|.+|++||+++|+||
T Consensus 125 ~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dgt~~~~~~----~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~ 200 (356)
T 3jxv_A 125 KDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGTVVSKSE----GVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVK 200 (356)
T ss_dssp SSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEEE----EEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEEC
T ss_pred cCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCCCEEeccC----CEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEC
Confidence 5689999999999999999999999999999999999999873 799999999999999999999999999999999
Q ss_pred CCcccCCCCCCC-----CCCCCCceEEEEEEEEEeecceeccCccceeEeeeccccccCCCCCCeEEEEEEEEeCCCcee
Q 011003 115 PELAYGESGSPP-----TIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVV 189 (496)
Q Consensus 115 ~~~ayg~~~~~~-----~ip~~~~l~~~v~l~~~~~~~~~~~d~~~~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~ 189 (496)
|+++||..+.+. .||++++|.|+|+|++|..+.++..+..+.+++++.|+|+..|..+|.|++||++++.+|++|
T Consensus 201 p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~f 280 (356)
T 3jxv_A 201 PQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVF 280 (356)
T ss_dssp GGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEE
T ss_pred hHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccccccccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEE
Confidence 999999988753 699999999999999999999999999999999999999999999999999999999999999
Q ss_pred eec-----cceEEEecCCCCcchHHHHHhccccCcEEEEEecCCCccCCCCCCCCCCCCCCCCCceEEEEEEeeeec
Q 011003 190 GKA-----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWK 261 (496)
Q Consensus 190 ~~~-----~~~~~~~g~~~~~~gl~~~l~~m~~ge~~~v~vp~~~~~g~~~~~~~~~~~~i~~~~~l~~ev~l~~~~ 261 (496)
+++ +++.|.+|.+++++||+++|.+|++||+++++|||++|||+.+.. ....||++++|+|+|+|+++.
T Consensus 281 d~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~---~~~~Ip~~~~l~f~vel~~~~ 354 (356)
T 3jxv_A 281 LKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESK---QDAIVPPNSTVIYEVELVSFV 354 (356)
T ss_dssp EEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTSCEE---SSSEECTTCCEEEEEEEEEEE
T ss_pred eeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEEEChHHccCCCCcC---CCCcCCcCCeEEEEEEEEEEE
Confidence 865 579999999999999999999999999999999999999987642 125689999999999999875
No 6
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=100.00 E-value=3.6e-33 Score=278.53 Aligned_cols=223 Identities=32% Similarity=0.487 Sum_probs=196.3
Q ss_pred CcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcC-CcEEEEcCCCCCcccEEEEcCcc-chhhHHHHHHhccccCcEEEE
Q 011003 269 DKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQD-GTVFVKKGHSEEEQLFEFKTDEE-QVIDGLDRAVITMKKNEVALL 346 (496)
Q Consensus 269 d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~-g~~~~~~~~~~~~~~~~~~lg~~-~~~~gle~~l~~M~~Ge~~~v 346 (496)
+.++.++++++|.| ..|..|+.|+|||.+++.+ |++|++++. .+.|+.|.+|.+ ++++||+.+|.+|++||++.|
T Consensus 48 ~~~~~~~~~~~g~g-~~~~~gd~v~v~y~g~~~~~g~~fd~~~~--~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~ 124 (338)
T 2if4_A 48 DEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWH--EQQPIELVLGKEKKELAGLAIGVASMKSGERALV 124 (338)
T ss_dssp ETTEEEEEEECCBS-CCCCTTCEEEEEEEEEETTTCCCCEEHHH--HTCCEEEETTSCCGGGHHHHHHHHHCCBTCEEEE
T ss_pred CCCeEEEEEeCCCC-CCCCCCCEEEEEEEEEEcCCCcEeecccC--CCCCeEEEcCCCCcccHHHHHHHhcCCCCCeEEE
Confidence 56899999999999 6899999999999999985 999998743 468999999999 999999999999999999999
Q ss_pred EEcCCCccCCccccccccCCCCCCeEEEEEEEeeeeccc---cccccChHHHHHHHhhhHHhhhhhHhcccHHHHHHHHH
Q 011003 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEK---ESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYE 423 (496)
Q Consensus 347 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~~~~---~~~~~~~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~ 423 (496)
+||+.++||..+... .+.||++++++|+|+|+++.... ..|.++.+++++.+..++..|+.+|+.++|.+|+..|.
T Consensus 125 ~i~~~~~yg~~~~~~-~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~ 203 (338)
T 2if4_A 125 HVGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQYE 203 (338)
T ss_dssp EECGGGSSCSSCCCS-SSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHH
T ss_pred EECHHHhcCCCCCCC-CCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 999999999987631 25699999999999999998644 47889999999999999999999999999999999999
Q ss_pred HHhhhhccCC--CCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhcccccccccc
Q 011003 424 KAVKYIEYDT--SFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 424 ~al~~~~~~~--~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
+|+++.+... ............+...+|+|+|.||+++++|.+|+.+|++||+++|+|.++||++|.+|+.+
T Consensus 204 ~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~ 277 (338)
T 2if4_A 204 MAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAEL 277 (338)
T ss_dssp HHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 9999865432 11222333445566679999999999999999999999999999999999999999998765
No 7
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.97 E-value=1.3e-30 Score=259.77 Aligned_cols=223 Identities=39% Similarity=0.700 Sum_probs=204.6
Q ss_pred eeeeccCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccc---hhhHHHHHHhccc
Q 011003 263 VSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQ---VIDGLDRAVITMK 339 (496)
Q Consensus 263 ~~d~~~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~---~~~gle~~l~~M~ 339 (496)
..+++.|++++|+|+++|.|..+|..|+.|+|||.+++ +|++||++ |+.|.+|.|. ++++|+.||..|+
T Consensus 18 ~~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-------~~~f~lG~g~~~~~~~~~e~al~~~~ 89 (336)
T 1p5q_A 18 GSHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-------ELRFEIGEGENLDLPYGLERAIQRME 89 (336)
T ss_dssp ----CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-------EEEEETTCGGGGTCCHHHHHHHTTCC
T ss_pred ceeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-------CeEEEeCCCCccccchHHHHHHhcCC
Confidence 45667899999999999999768999999999999999 99999864 8999999887 5899999999999
Q ss_pred cCcEEEEEEcCCCccCCccccccccCCCCCCeEEEEEEEeeeeccccccccChHHHHHHHhhhHHhhhhhHhcccHHHHH
Q 011003 340 KNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARAS 419 (496)
Q Consensus 340 ~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~~~~~~~~~~~~e~~~~a~~~k~~Gn~~fk~~~y~~A~ 419 (496)
+||++.+.++|+++||..|... ..||+++.+.|+++|.++......+.+..+.....+..+...|+.+++.|+|.+|+
T Consensus 90 ~Ge~~~l~i~p~~ayg~~g~~~--~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~ 167 (336)
T 1p5q_A 90 KGEHSIVYLKPSYAFGSVGKEK--FQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQAL 167 (336)
T ss_dssp TTCEEEEEECTTTTTTTTCBGG--GTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCeEEEEECCccccCcCCCCc--cCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 9999999999999999988753 36999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhcccccccccc
Q 011003 420 KRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 420 ~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
..|++|+++.+.......+...++.+....+|+|+|.||+++++|.+|+.+|++||+++|+++++||++|.+|+.+
T Consensus 168 ~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~ 243 (336)
T 1p5q_A 168 LQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAV 243 (336)
T ss_dssp HHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC
Confidence 9999999998877666677788889999999999999999999999999999999999999999999999998765
No 8
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.91 E-value=4.7e-24 Score=177.10 Aligned_cols=111 Identities=50% Similarity=0.855 Sum_probs=103.9
Q ss_pred ecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEe
Q 011003 34 IGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTI 113 (496)
Q Consensus 34 ~~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~i 113 (496)
.+++|++|+++++|+|...++.||.|.+||++++.||++|++++.+++|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 3 ~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~i 82 (113)
T 1yat_A 3 VIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTI 82 (113)
T ss_dssp ECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEE
T ss_pred CCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEEE
Confidence 47899999999999994339999999999999999999999998777899999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCCCCCceEEEEEEEEEe
Q 011003 114 PPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (496)
Q Consensus 114 p~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~ 144 (496)
||++|||..+.++.||+|++++|+|+|++++
T Consensus 83 p~~~ayG~~~~~~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 83 PGPYAYGPRGFPGLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp CGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred CHHHCcCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence 9999999998877899999999999998873
No 9
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.91 E-value=5.3e-24 Score=178.59 Aligned_cols=109 Identities=46% Similarity=0.832 Sum_probs=102.0
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCC-------CccEEEEeCCCcccHHHHHHHccCcCCc
Q 011003 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDR-------STPFKFTLGQGNVIKGWDIGIKTMKKGE 107 (496)
Q Consensus 35 ~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~-------~~p~~~~~G~~~~~~gle~~l~~m~~Ge 107 (496)
.|+|++|+++++|+|...|+.||.|.+||++++.||++|++|+.. +.|+.|.+|.+++++||+++|.+|++|+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 589999999999999667999999999999999999999999753 4899999999999999999999999999
Q ss_pred EEEEEecCCcccCCCCCCC-CCCCCCceEEEEEEEEE
Q 011003 108 NAVFTIPPELAYGESGSPP-TIPPNATLQFDVELLSW 143 (496)
Q Consensus 108 ~~~i~ip~~~ayg~~~~~~-~ip~~~~l~~~v~l~~~ 143 (496)
+++|.|||++|||..+.+. .||++++|+|+|+|+++
T Consensus 82 ~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 82 KARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp EEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEE
T ss_pred EEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEe
Confidence 9999999999999998754 79999999999999986
No 10
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.91 E-value=3.7e-24 Score=183.13 Aligned_cols=121 Identities=55% Similarity=0.993 Sum_probs=105.3
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEec
Q 011003 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (496)
Q Consensus 35 ~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip 114 (496)
+++|++|+++++|+|...|+.||.|.+||++++.||++|++++.+++|+.|.+|.+++++||+++|.+|++|++++|.||
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ip 91 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIR 91 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEEC
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEEEC
Confidence 67899999999999955799999999999999999999999986668999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCCCceEEEEEEEEEeecceec--cCccce
Q 011003 115 PELAYGESGSPPTIPPNATLQFDVELLSWTSVKDIC--KDGGII 156 (496)
Q Consensus 115 ~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~--~d~~~~ 156 (496)
|++|||..+.+..||++++++|+|+|+++... ++. .|+.++
T Consensus 92 ~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~~-~l~~~~d~~v~ 134 (135)
T 1r9h_A 92 SDYGYGDAGSPPKIPGGATLIFEVELFEWSAE-DISPDRDGTIL 134 (135)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-------------
T ss_pred hHHcCCCCCCCCCcCcCCcEEEEEEEEEeecC-CcCcCCCCccc
Confidence 99999999987899999999999999999763 333 455544
No 11
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.91 E-value=6.6e-25 Score=187.51 Aligned_cols=126 Identities=36% Similarity=0.638 Sum_probs=106.0
Q ss_pred CCCCCCcccccCcee--eecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEc-CCCEEEeecCCCccEEEEeCCCcccH
Q 011003 18 DLPDDAPMMKVGEEK--EIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQGNVIK 94 (496)
Q Consensus 18 ~~~~~~~~~~~~~~~--~~~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~-dg~~~~~t~~~~~p~~~~~G~~~~~~ 94 (496)
+.++..|+.+++.+. +.+++||+|+++++|+| ..+..||.|.+||++++. +|++|++++.+++|+.|.+|.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~v~~~~gl~~~vl~~G~g-~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~ 83 (134)
T 3b7x_A 5 DAPGQSLYERLSQRMLDISGDRGVLKDVIREGAG-DLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLW 83 (134)
T ss_dssp ----CCHHHHHTTTCEESSSSSSEEEEEEECCEE-EECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCH
T ss_pred cCCCCChhHHhccccceeeCCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhH
Confidence 456778888777666 56889999999999999 678899999999999988 69999999877789999999999999
Q ss_pred HHHHHHccCcCCcEEEEEecCCcccCCCCCCCCCCCCCceEEEEEEEEEe
Q 011003 95 GWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (496)
Q Consensus 95 gle~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~ 144 (496)
||+++|.+|++|++++|.|||++|||..+.++.||+|++++|+|+|+++.
T Consensus 84 G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 84 GMELGLLSMRRGELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp HHHHHHHTCEETCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred HHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence 99999999999999999999999999999877899999999999999875
No 12
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.91 E-value=4.5e-24 Score=181.02 Aligned_cols=111 Identities=52% Similarity=0.906 Sum_probs=105.3
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEec
Q 011003 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (496)
Q Consensus 35 ~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip 114 (496)
+++|++|+++++|+|...|+.||.|.+||++++.||++|++++.+++|+.|.+|.+++++||+++|.+|++|++++|.||
T Consensus 17 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ip 96 (128)
T 3o5q_A 17 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCK 96 (128)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCCEEEEEEC
Confidence 67899999999999965799999999999999999999999987678999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCCCceEEEEEEEEEee
Q 011003 115 PELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (496)
Q Consensus 115 ~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (496)
|++|||..+.++.||++++|+|+|+|+++..
T Consensus 97 ~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 97 PEYAYGSAGSLPKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred hHHcCCCCCCCCCcCCCCEEEEEEEEEEecC
Confidence 9999999998889999999999999999863
No 13
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.91 E-value=5.8e-24 Score=183.88 Aligned_cols=110 Identities=53% Similarity=0.913 Sum_probs=105.4
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEec
Q 011003 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (496)
Q Consensus 35 ~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip 114 (496)
.++|++|+++++|+|...|..||.|.|||++++.||++|++++.++.|+.|.+|.+++++||+++|.+|++|++++|.||
T Consensus 33 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ip 112 (144)
T 3o5e_A 33 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCK 112 (144)
T ss_dssp CSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEEC
T ss_pred CCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEEC
Confidence 68899999999999965899999999999999999999999988789999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCCCceEEEEEEEEEe
Q 011003 115 PELAYGESGSPPTIPPNATLQFDVELLSWT 144 (496)
Q Consensus 115 ~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~ 144 (496)
|++|||..+.++.||++++|+|+|+|+++.
T Consensus 113 p~~aYG~~g~~~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 113 PEYAYGSAGSLPKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred hHHCcCCCCCCCCcCCCCeEEEEEEEEEec
Confidence 999999999888999999999999999986
No 14
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.91 E-value=1e-23 Score=173.39 Aligned_cols=106 Identities=51% Similarity=0.943 Sum_probs=100.0
Q ss_pred CeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEecCCc
Q 011003 38 GLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPEL 117 (496)
Q Consensus 38 g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip~~~ 117 (496)
||+|+++++|+|...++.||.|.+||++++.||++|++++.+++|+.|.+|.+++++||+++|.+|++|++++|.|||++
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ 80 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY 80 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECHHH
Confidence 79999999999944499999999999999999999999987668999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCceEEEEEEEEE
Q 011003 118 AYGESGSPPTIPPNATLQFDVELLSW 143 (496)
Q Consensus 118 ayg~~~~~~~ip~~~~l~~~v~l~~~ 143 (496)
|||..+.++.||++++++|+|+|+++
T Consensus 81 ayG~~~~~~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 81 AYGATGHPGIIPPHATLVFDVELLKL 106 (107)
T ss_dssp TTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred ccCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 99999887789999999999999886
No 15
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.91 E-value=1.6e-23 Score=178.34 Aligned_cols=110 Identities=53% Similarity=0.881 Sum_probs=104.6
Q ss_pred eecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEE
Q 011003 33 EIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFT 112 (496)
Q Consensus 33 ~~~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ 112 (496)
..+++|++|+++++|+| ..++.||.|.+||++++.||++|++++++++|+.|.+|.+++++||+++|.+|++|++++|.
T Consensus 24 ~~~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v~ 102 (133)
T 2y78_A 24 VTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLT 102 (133)
T ss_dssp EECTTSCEEEEEECCSS-CBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEEE
T ss_pred EECCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEEE
Confidence 55889999999999999 78999999999999999999999999877789999999999999999999999999999999
Q ss_pred ecCCcccCCCCCCCCCCCCCceEEEEEEEEE
Q 011003 113 IPPELAYGESGSPPTIPPNATLQFDVELLSW 143 (496)
Q Consensus 113 ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~ 143 (496)
|||++|||..+.++.||+|++++|+|+|+++
T Consensus 103 ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 103 IPPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred ECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 9999999999987789999999999999874
No 16
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.90 E-value=6.5e-24 Score=211.49 Aligned_cols=118 Identities=31% Similarity=0.616 Sum_probs=107.3
Q ss_pred ccCceeeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcC-CCEEEeecCCCccEEEEeCCC-cccHHHHHHHccCc
Q 011003 27 KVGEEKEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLD-GTQFDSSRDRSTPFKFTLGQG-NVIKGWDIGIKTMK 104 (496)
Q Consensus 27 ~~~~~~~~~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~d-g~~~~~t~~~~~p~~~~~G~~-~~~~gle~~l~~m~ 104 (496)
++......+++|+.|+++++|+| ..|..||.|.|||++++.+ |++|++++.++.|+.|.+|.+ ++++||+++|.+|+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~g~g-~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~ 117 (338)
T 2if4_A 39 KVDSEAEVLDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMK 117 (338)
T ss_dssp CCCSCCEEEETTEEEEEEECCBS-CCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCC
T ss_pred CCCcCceeCCCCeEEEEEeCCCC-CCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCC
Confidence 45555667889999999999999 6899999999999999985 999999987678999999999 89999999999999
Q ss_pred CCcEEEEEecCCcccCCCCC--CCCCCCCCceEEEEEEEEEee
Q 011003 105 KGENAVFTIPPELAYGESGS--PPTIPPNATLQFDVELLSWTS 145 (496)
Q Consensus 105 ~Ge~~~i~ip~~~ayg~~~~--~~~ip~~~~l~~~v~l~~~~~ 145 (496)
+|++++|.|||+++||..+. .+.||++++++|.|+|+++..
T Consensus 118 ~Ge~~~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~ 160 (338)
T 2if4_A 118 SGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDE 160 (338)
T ss_dssp BTCEEEEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEEC
T ss_pred CCCeEEEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecC
Confidence 99999999999999999886 357999999999999988764
No 17
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.90 E-value=1.4e-24 Score=225.13 Aligned_cols=226 Identities=25% Similarity=0.284 Sum_probs=142.6
Q ss_pred eec--cCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCc
Q 011003 265 EIT--DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNE 342 (496)
Q Consensus 265 d~~--~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge 342 (496)
+++ .++++.++++++|+|...|..|+.|+|||.+++.||++|++++. .+.|+.|.+|.+.+++||+.+|.+|++||
T Consensus 24 ~~~~~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~--~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge 101 (457)
T 1kt0_A 24 DITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHD--RNEPFVFSLGKGQVIKAWDIGVATMKRGE 101 (457)
T ss_dssp ---------CEEEC--------CCCBTCEEEEEEEEEC-----CBC--------CEEEETTSTTSCHHHHHHHTTCCTTC
T ss_pred cccCCCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCC--CCCCeEEEeCCcchhhHHHHHHhhCCCCC
Confidence 455 68899999999999966699999999999999999999998743 56899999999999999999999999999
Q ss_pred EEEEEEcCCCccCCccccccccCCCCCCeEEEEEEEeeeeccccc---------------cccChH-HH--HHHH-----
Q 011003 343 VALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKES---------------WDMNTE-EK--IEAA----- 399 (496)
Q Consensus 343 ~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~~~~~~---------------~~~~~~-e~--~~~a----- 399 (496)
++.|+|||+++||..+.+ +.||++++++|+|+|+++....-. +..... .. ....
T Consensus 102 ~~~~~i~~~~~yg~~g~~---~~i~~~~~l~~~v~l~~~~~~~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~~g 178 (457)
T 1kt0_A 102 ICHLLCKPEYAYGSAGSL---PKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGG 178 (457)
T ss_dssp EEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEECEETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEETT
T ss_pred EEEEEEChHHhccccCCC---CCCCCCCcEEEEEeeceeecccccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEEeCC
Confidence 999999999999998865 579999999999999998753100 000000 00 0000
Q ss_pred hh--------hHHhhhhhHhcccHHHHHHHHHH----HhhhhccC----------------------------CCCCh-H
Q 011003 400 GK--------KKEQGNTLFKAGKYARASKRYEK----AVKYIEYD----------------------------TSFGD-E 438 (496)
Q Consensus 400 ~~--------~k~~Gn~~fk~~~y~~A~~~Y~~----al~~~~~~----------------------------~~~~~-~ 438 (496)
.. ...+|+..--...++.|+..+++ ++.+-+.. ..... +
T Consensus 179 ~~f~~~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~~~~~ 258 (457)
T 1kt0_A 179 RMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAKESWE 258 (457)
T ss_dssp EEEEEEEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECCCCGGG
T ss_pred eEEecCceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccCcchhh
Confidence 00 00011111111245555555544 22210000 00000 1
Q ss_pred HHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCC---------------cchhcccccccccc
Q 011003 439 EKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQK---------------GSGIHSDGRFRFGR 495 (496)
Q Consensus 439 ~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~---------------~Ka~~rrg~a~~~l 495 (496)
......+.....+.|++.+++++++|.+|+..+++||+++|++ ..+|+++|.||+.+
T Consensus 259 ~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~ 330 (457)
T 1kt0_A 259 MDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKL 330 (457)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1123466778899999999999999999999999999999999 68999999988764
No 18
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.90 E-value=4.9e-24 Score=185.98 Aligned_cols=118 Identities=25% Similarity=0.359 Sum_probs=99.6
Q ss_pred eecCCCeEEEEEEcccCCC-CCCCCCEEEEEEEEEEcC--CCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEE
Q 011003 33 EIGNQGLKKKLVKEGEGWD-TPENGDEVEVHYTGTLLD--GTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENA 109 (496)
Q Consensus 33 ~~~~~g~~~~~l~~G~G~~-~~~~gd~V~v~Y~~~~~d--g~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~ 109 (496)
.++++||+|+++++|+|.. .+..||.|.+||++++.| |++||||+++++|+.|.+|.+++|+||+++|.+|++|+++
T Consensus 6 ~~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~ 85 (165)
T 2lkn_A 6 RLREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEIA 85 (165)
T ss_dssp HHHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCEE
T ss_pred cccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCceE
Confidence 3578999999999999942 236899999999999965 9999999999999999999999999999999999999999
Q ss_pred EEEecCCcccCCC--------CCCCC-----------------------------CCCCCceEEEEEEEEEeecceec
Q 011003 110 VFTIPPELAYGES--------GSPPT-----------------------------IPPNATLQFDVELLSWTSVKDIC 150 (496)
Q Consensus 110 ~i~ip~~~ayg~~--------~~~~~-----------------------------ip~~~~l~~~v~l~~~~~~~~~~ 150 (496)
+|+|||++|||.. ..... ++++++|+|+|||+++..+....
T Consensus 86 ~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~eye 163 (165)
T 2lkn_A 86 QFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGTYQ 163 (165)
T ss_dssp EEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTTTCC
T ss_pred EEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCcccc
Confidence 9999999999921 00111 23447899999999998765543
No 19
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.90 E-value=3.7e-23 Score=185.21 Aligned_cols=129 Identities=29% Similarity=0.558 Sum_probs=113.2
Q ss_pred CCCCCcccccCceeeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEc-CCCEEEeecCCCccEEEEeCCC-cccHHH
Q 011003 19 LPDDAPMMKVGEEKEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQG-NVIKGW 96 (496)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~-dg~~~~~t~~~~~p~~~~~G~~-~~~~gl 96 (496)
++.+....+..+....+++|++|+++++|+| ..|..||.|.|||++++. ||++|++|+.++.|+.|.+|.+ ++++||
T Consensus 31 ~~~~~~p~~~~~~~~~~~~gl~~~vl~~G~G-~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~ 109 (180)
T 2f4e_A 31 SQEGNVPPKVDSEAEVLDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGL 109 (180)
T ss_dssp ---CCSCCCCCSCCEEEETTEEEEEEECCBS-CCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHH
T ss_pred CCcccCCcccCCCcEECCCceEEEEEeCCCC-CCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHH
Confidence 3333334456666778999999999999999 689999999999999998 5999999988789999999999 999999
Q ss_pred HHHHccCcCCcEEEEEecCCcccCCCCC--CCCCCCCCceEEEEEEEEEeecce
Q 011003 97 DIGIKTMKKGENAVFTIPPELAYGESGS--PPTIPPNATLQFDVELLSWTSVKD 148 (496)
Q Consensus 97 e~~l~~m~~Ge~~~i~ip~~~ayg~~~~--~~~ip~~~~l~~~v~l~~~~~~~~ 148 (496)
+++|.+|++|++++|.|||+++||..+. .+.||+|++++|+|+|+++.....
T Consensus 110 eeaL~gMk~Ge~~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e 163 (180)
T 2f4e_A 110 AIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKE 163 (180)
T ss_dssp HHHHTTCCBTCEEEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCC
T ss_pred HHHHhCCCCCCEEEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCcc
Confidence 9999999999999999999999999886 357999999999999999976543
No 20
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.90 E-value=1.9e-23 Score=177.27 Aligned_cols=113 Identities=54% Similarity=0.963 Sum_probs=104.6
Q ss_pred eeeecCCCeEEE--EEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcE
Q 011003 31 EKEIGNQGLKKK--LVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGEN 108 (496)
Q Consensus 31 ~~~~~~~g~~~~--~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~ 108 (496)
....+++|++|+ ++++|+|...++.||.|.+||++++.||++|++++.+++|+.|.+|.+++++||+++|.+|++|++
T Consensus 16 ~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~ 95 (130)
T 2lgo_A 16 TQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEK 95 (130)
T ss_dssp SCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEE
T ss_pred cceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCE
Confidence 345578999999 999999943399999999999999989999999988778999999999999999999999999999
Q ss_pred EEEEecCCcccCCCCCCCCCCCCCceEEEEEEEEE
Q 011003 109 AVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 143 (496)
Q Consensus 109 ~~i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~ 143 (496)
++|.|||++|||..+.++.||+|++++|+|+|+++
T Consensus 96 ~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 96 ALFTIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp EEEEECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred EEEEECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 99999999999999987789999999999999874
No 21
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.90 E-value=5e-23 Score=174.05 Aligned_cols=111 Identities=38% Similarity=0.668 Sum_probs=103.9
Q ss_pred eecCCCeEEEEEEccc--CCCCCCCCCEEEEEEEEEEc-CCCEEEeecC--CCccEEEEeCCCcccHHHHHHHccCcCCc
Q 011003 33 EIGNQGLKKKLVKEGE--GWDTPENGDEVEVHYTGTLL-DGTQFDSSRD--RSTPFKFTLGQGNVIKGWDIGIKTMKKGE 107 (496)
Q Consensus 33 ~~~~~g~~~~~l~~G~--G~~~~~~gd~V~v~Y~~~~~-dg~~~~~t~~--~~~p~~~~~G~~~~~~gle~~l~~m~~Ge 107 (496)
+++++|++|+++++|+ | ..++.||.|.+||++++. ||++|++++. .+.|+.|.+|.+++++||+++|.+|++|+
T Consensus 8 ~~~~~gl~~~~l~~g~~~g-~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 86 (125)
T 4dip_A 8 LIPEPEVKIEVLQKPFICH-RKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGE 86 (125)
T ss_dssp GCCCCCCEEEEEECCSCCS-CCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTC
T ss_pred EECCCCeEEEEEEcCCCCC-CcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCC
Confidence 4678999999999998 5 789999999999999999 9999999973 46899999999999999999999999999
Q ss_pred EEEEEecCCcccCCCCCCCCCCCCCceEEEEEEEEEee
Q 011003 108 NAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (496)
Q Consensus 108 ~~~i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (496)
+++|.|||++|||..+.+ .||++++|+|+|+|+++..
T Consensus 87 ~~~~~ip~~~aYG~~g~~-~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 87 KRKLIIPPALGYGKEGKG-KIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp EEEEEECGGGTTTTTCBT-TBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEEChHHhcCCCCCC-CCCCCCeEEEEEEEEEEEc
Confidence 999999999999999966 8999999999999999864
No 22
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.89 E-value=1.2e-22 Score=186.15 Aligned_cols=111 Identities=52% Similarity=0.873 Sum_probs=105.5
Q ss_pred eeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEE
Q 011003 32 KEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVF 111 (496)
Q Consensus 32 ~~~~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i 111 (496)
...+++|++|+++++|+| ..|..||.|.+||++++.||++|+++++++.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 99 ~~~~~sGl~~~vl~~G~G-~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v 177 (209)
T 3uf8_A 99 VVTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRL 177 (209)
T ss_dssp CEECTTSCEEEEEECCCS-CBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTCEEEE
T ss_pred ccCCCCceEEEEEEcCCC-CcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCCEEEE
Confidence 356899999999999999 6799999999999999999999999988789999999999999999999999999999999
Q ss_pred EecCCcccCCCCCCCCCCCCCceEEEEEEEEE
Q 011003 112 TIPPELAYGESGSPPTIPPNATLQFDVELLSW 143 (496)
Q Consensus 112 ~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~ 143 (496)
.|||++|||..+.++.||+|++|+|+|+|+++
T Consensus 178 ~Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 178 TIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred EECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 99999999999988789999999999999874
No 23
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.89 E-value=5.3e-23 Score=181.24 Aligned_cols=111 Identities=43% Similarity=0.712 Sum_probs=104.4
Q ss_pred eeecCCCeEEEEEEcccCCCC-CCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEE
Q 011003 32 KEIGNQGLKKKLVKEGEGWDT-PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAV 110 (496)
Q Consensus 32 ~~~~~~g~~~~~l~~G~G~~~-~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~ 110 (496)
...+++||+|+++++|+| .. |..||.|.|||++++.||++|++++.++.|+.|.+| ++++||+++|.+|++|++++
T Consensus 32 ~~~~~sGl~~~vl~~G~G-~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Ge~~~ 108 (167)
T 1jvw_A 32 AVKLPSGLVFQRIARGSG-KRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRPN--EVIKGWTEALQLMREGDRWR 108 (167)
T ss_dssp EEECTTSCEEEEEECCCC-SBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECGG--GSCHHHHHHHTTCCTTCEEE
T ss_pred cEECCCCEEEEEEEcCCC-CcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEeC--chhHHHHHHHcCCCCCCEEE
Confidence 467899999999999999 66 999999999999999999999999876789999995 89999999999999999999
Q ss_pred EEecCCcccCCCCCCCCCCCCCceEEEEEEEEEee
Q 011003 111 FTIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (496)
Q Consensus 111 i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (496)
|+|||++|||..+.++.||+|++|+|+|+|+++..
T Consensus 109 ~~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~ 143 (167)
T 1jvw_A 109 LFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKD 143 (167)
T ss_dssp EEECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGG
T ss_pred EEECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEc
Confidence 99999999999998778999999999999999974
No 24
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.89 E-value=2.4e-22 Score=170.81 Aligned_cols=113 Identities=47% Similarity=0.835 Sum_probs=101.4
Q ss_pred eecCCCe-EEEEEEcc-cC-CCCCCCCCEEEEEEEEEE-cCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcE
Q 011003 33 EIGNQGL-KKKLVKEG-EG-WDTPENGDEVEVHYTGTL-LDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGEN 108 (496)
Q Consensus 33 ~~~~~g~-~~~~l~~G-~G-~~~~~~gd~V~v~Y~~~~-~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~ 108 (496)
.++++|+ +++++++| +| ...++.||.|.+||++++ .||++|++++.+++|+.|.+|.+++++||+++|.+|++|++
T Consensus 11 ~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~~Ge~ 90 (129)
T 2vn1_A 11 ELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEK 90 (129)
T ss_dssp ECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCCTTCE
T ss_pred EECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCCCCCE
Confidence 4455655 55799976 44 278999999999999999 79999999987778999999999999999999999999999
Q ss_pred EEEEecCCcccCCCCCCCCCCCCCceEEEEEEEEEee
Q 011003 109 AVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (496)
Q Consensus 109 ~~i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (496)
++|.|||++|||..+.++.||+|++++|+|+|+++..
T Consensus 91 ~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 91 CLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp EEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEec
Confidence 9999999999999988778999999999999999864
No 25
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.89 E-value=1.2e-22 Score=185.50 Aligned_cols=106 Identities=34% Similarity=0.616 Sum_probs=101.1
Q ss_pred eecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEE
Q 011003 33 EIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFT 112 (496)
Q Consensus 33 ~~~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ 112 (496)
..+++|++|+++++|+| ..|..||.|.|||++++.||++|++| +.|+.|.+| ++|+||+++|.+|++|++++|+
T Consensus 113 ~~~~sGl~y~vl~~G~G-~~p~~gd~V~V~Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~ 186 (219)
T 3oe2_A 113 KELADGILMTELTPGTG-PKPDANGRVEVRYVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSALQNMPTGAKWRLV 186 (219)
T ss_dssp EECGGGCEEEEEECCCS-CCCCTTSEEEEEEEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEE
T ss_pred EECCCCeEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEeecc---CCcEEEEec--chhHHHHHHHhCCCCCCEEEEE
Confidence 56899999999999999 78999999999999999999999999 589999998 8999999999999999999999
Q ss_pred ecCCcccCCCCCCCCCCCCCceEEEEEEEEEe
Q 011003 113 IPPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (496)
Q Consensus 113 ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~ 144 (496)
|||++|||..+.++.||++++|+|+|+|+++.
T Consensus 187 IPp~lAYG~~g~~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 187 IPSDQAYGAEGAGDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred ECchhcCCCCCCCCCCCCCCeEEEEEEEEEEe
Confidence 99999999999887899999999999999985
No 26
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.88 E-value=2.5e-22 Score=173.64 Aligned_cols=116 Identities=39% Similarity=0.593 Sum_probs=106.5
Q ss_pred ceeeec--cCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccc
Q 011003 262 TVSEIT--DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMK 339 (496)
Q Consensus 262 ~~~d~~--~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~ 339 (496)
...|++ .|++++++++++|+|...|..++.|.|||.+++.||++|++++. .+.|+.|.+|.+++++||+.+|.+|+
T Consensus 25 ~~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~--~~~p~~f~lG~g~~i~G~e~~l~gm~ 102 (144)
T 3o5e_A 25 QGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHD--RNEPFVFSLGKGQVIKAWDIGVATMK 102 (144)
T ss_dssp HCEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGG--GTSCEEEETTSSSSCHHHHHHHTTCC
T ss_pred ccccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecc--cCCCeEEEeCCCcccHHHHHHHhCCC
Confidence 456666 68899999999999966899999999999999999999998753 57899999999999999999999999
Q ss_pred cCcEEEEEEcCCCccCCccccccccCCCCCCeEEEEEEEeeee
Q 011003 340 KNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (496)
Q Consensus 340 ~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~ 382 (496)
+||+++|+|||++|||+.+.+ +.|||+++|+|+|+|+++.
T Consensus 103 ~Ge~~~v~ipp~~aYG~~g~~---~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 103 KGEICHLLCKPEYAYGSAGSL---PKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp BTCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEE
T ss_pred CCCEEEEEEChHHCcCCCCCC---CCcCCCCeEEEEEEEEEec
Confidence 999999999999999999875 5799999999999999986
No 27
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.88 E-value=4.8e-22 Score=173.10 Aligned_cols=110 Identities=34% Similarity=0.559 Sum_probs=101.3
Q ss_pred eecCCCe-EEEEEEcccCC-CCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEE
Q 011003 33 EIGNQGL-KKKLVKEGEGW-DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAV 110 (496)
Q Consensus 33 ~~~~~g~-~~~~l~~G~G~-~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~ 110 (496)
.++++|+ +|+++++|+|. ..|+.||.|.|||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|++++
T Consensus 38 ~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~ 113 (157)
T 2jwx_A 38 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAM 113 (157)
T ss_dssp ESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE----EEEEEETTTTSSCHHHHHHTTTSCTTCEEE
T ss_pred eECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC----CCEEEEeCCCChhHHHHHHHcCCCCCCEEE
Confidence 4677886 89999999992 38999999999999999999999984 799999999999999999999999999999
Q ss_pred EEecCCcccCCCC-CCCCCCCCCceEEEEEEEEEeec
Q 011003 111 FTIPPELAYGESG-SPPTIPPNATLQFDVELLSWTSV 146 (496)
Q Consensus 111 i~ip~~~ayg~~~-~~~~ip~~~~l~~~v~l~~~~~~ 146 (496)
|+||+++|||..+ .+..||+|++++|+|+|+++...
T Consensus 114 v~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~ 150 (157)
T 2jwx_A 114 VTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDL 150 (157)
T ss_dssp EEECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEEC
T ss_pred EEECchhcCCcccccCCCcCCCCeEEEEEEEEEEEcc
Confidence 9999999999998 66789999999999999998754
No 28
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.88 E-value=7.1e-23 Score=173.88 Aligned_cols=112 Identities=41% Similarity=0.711 Sum_probs=103.6
Q ss_pred eeeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHcc------Cc
Q 011003 31 EKEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKT------MK 104 (496)
Q Consensus 31 ~~~~~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~------m~ 104 (496)
....+++||+|+++++|+| ..++.||.|.+||++++.||++|++++.+++|+.|.+|.+++++||+++|.+ |+
T Consensus 6 ~~~~~~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~ 84 (129)
T 1u79_A 6 EFSVSPSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPML 84 (129)
T ss_dssp CCEECTTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCB
T ss_pred ccEECCCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccC
Confidence 3456889999999999999 7899999999999999999999999986568999999999999999999998 99
Q ss_pred CCcEEEEEecCCcccCCCCCC-----CCCCCCCceEEEEEEEEE
Q 011003 105 KGENAVFTIPPELAYGESGSP-----PTIPPNATLQFDVELLSW 143 (496)
Q Consensus 105 ~Ge~~~i~ip~~~ayg~~~~~-----~~ip~~~~l~~~v~l~~~ 143 (496)
+|++++|.|||++|||..+.+ ..||+|++++|+|+|+++
T Consensus 85 ~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 85 TGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 999999999999999998863 479999999999999876
No 29
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.88 E-value=3e-22 Score=179.28 Aligned_cols=128 Identities=34% Similarity=0.497 Sum_probs=103.9
Q ss_pred cCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEc-CCcEEEEcCCCCCcccEEEEcCcc-chhhHHHHHHhccccCcEEE
Q 011003 268 DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQ-DGTVFVKKGHSEEEQLFEFKTDEE-QVIDGLDRAVITMKKNEVAL 345 (496)
Q Consensus 268 ~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~-~g~~~~~~~~~~~~~~~~~~lg~~-~~~~gle~~l~~M~~Ge~~~ 345 (496)
.++++.++++++|+| ..|..|+.|+|||.+++. +|++|++++. ...|+.|.+|.+ ++++||+.+|.+|++||++.
T Consensus 47 ~~~gl~~~vl~~G~G-~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~--~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~ 123 (180)
T 2f4e_A 47 LDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWH--EQQPIELVLGKEKKELAGLAIGVASMKSGERAL 123 (180)
T ss_dssp EETTEEEEEEECCBS-CCBCTTCEEEEEEEEEETTTCCEEEETTT--TTCCEEEETTSCCGGGHHHHHHHTTCCBTCEEE
T ss_pred CCCceEEEEEeCCCC-CCCCCCCEEEEEEEEEECCCCcEEeccCc--cCCCEEEEeCCCCchhHHHHHHHhCCCCCCEEE
Confidence 356899999999999 689999999999999998 5999998854 568999999999 99999999999999999999
Q ss_pred EEEcCCCccCCccccccccCCCCCCeEEEEEEEeeeecccc---ccccChHHHHHHH
Q 011003 346 LTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKE---SWDMNTEEKIEAA 399 (496)
Q Consensus 346 v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~~~~~---~~~~~~~e~~~~a 399 (496)
|+|||++|||..+... .+.|||+++|+|+|+|+++....+ .|+|+.+|+++.|
T Consensus 124 v~iPp~~aYG~~g~~~-~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~~A 179 (180)
T 2f4e_A 124 VHVGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAA 179 (180)
T ss_dssp EEECGGGTTTTTCBSS-SSCBCTTCCEEEEEEEEEESCBCCC---------------
T ss_pred EEECchHhCCcCCccc-CCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHhhc
Confidence 9999999999987531 246999999999999999998877 8999999999876
No 30
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.88 E-value=2.3e-22 Score=183.93 Aligned_cols=111 Identities=36% Similarity=0.624 Sum_probs=104.4
Q ss_pred eeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEE
Q 011003 32 KEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVF 111 (496)
Q Consensus 32 ~~~~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i 111 (496)
...+++|++|+++++|+| ..|..||.|.|||++++.||++|++++.++.|+.|.+| ++++||+++|.+|++|++++|
T Consensus 101 v~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~~v 177 (213)
T 1fd9_A 101 VVVLPSGLQYKVINSGNG-VKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQVS--QVIPGWTEALQLMPAGSTWEI 177 (213)
T ss_dssp EEECTTSCEEEEEECCCS-CCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEGG--GSCHHHHHHHTTCCTTCEEEE
T ss_pred cEECCCccEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEcC--chhhHHHHHHcCCCCCCEEEE
Confidence 366899999999999999 78999999999999999999999999877789999995 899999999999999999999
Q ss_pred EecCCcccCCCCCCCCCCCCCceEEEEEEEEEee
Q 011003 112 TIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (496)
Q Consensus 112 ~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (496)
+|||+++||..+.++.||+|++++|+|+|+++..
T Consensus 178 ~IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 178 YVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp EECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEEC
T ss_pred EECchhccCccCCCCCCCCCCeEEEEEEEEEEEc
Confidence 9999999999998778999999999999999863
No 31
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.88 E-value=7.1e-22 Score=165.56 Aligned_cols=112 Identities=40% Similarity=0.627 Sum_probs=101.1
Q ss_pred CcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCC-----CCcccEEEEcCccchhhHHHHHHhccccCcE
Q 011003 269 DKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHS-----EEEQLFEFKTDEEQVIDGLDRAVITMKKNEV 343 (496)
Q Consensus 269 d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~-----~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~ 343 (496)
+++++|+++++|+|...|..+|.|.|||.+++.||++|++++.. ....|+.|.+|.+++++||+++|.+|++||+
T Consensus 3 p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~ 82 (119)
T 3kz7_A 3 PPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEK 82 (119)
T ss_dssp SCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTCE
T ss_pred CCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCCE
Confidence 56899999999999778999999999999999999999987531 1248999999999999999999999999999
Q ss_pred EEEEEcCCCccCCccccccccCCCCCCeEEEEEEEeeee
Q 011003 344 ALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (496)
Q Consensus 344 ~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~ 382 (496)
+.|+|||++|||+.+... ..|||+++|+|+|+|++++
T Consensus 83 ~~v~ip~~~aYG~~g~~~--~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 83 ARLEIEPEWAYGKKGQPD--AKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp EEEEECGGGTTCTTCBGG--GTBCTTCCEEEEEEEEEEC
T ss_pred EEEEECcHHhcCCCCCCC--CccCcCCeEEEEEEEEEeC
Confidence 999999999999988752 4699999999999999874
No 32
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.88 E-value=6.2e-22 Score=165.49 Aligned_cols=108 Identities=34% Similarity=0.563 Sum_probs=99.6
Q ss_pred eecCCC-eEEEEEEcccCC-CCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEE
Q 011003 33 EIGNQG-LKKKLVKEGEGW-DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAV 110 (496)
Q Consensus 33 ~~~~~g-~~~~~l~~G~G~-~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~ 110 (496)
.++++| ++|+++++|+|. ..|+.||.|.+||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|++++
T Consensus 8 ~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~ 83 (118)
T 2awg_A 8 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAM 83 (118)
T ss_dssp ESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE----EEEEEETTSSCSCHHHHHHGGGSCTTCEEE
T ss_pred EECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC----CCEEEEECCCChhHHHHHHHhCCCCCCEEE
Confidence 445666 999999999993 27999999999999999899999984 799999999999999999999999999999
Q ss_pred EEecCCcccCCCCCCCCCCCCCceEEEEEEEEEe
Q 011003 111 FTIPPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (496)
Q Consensus 111 i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~ 144 (496)
|.|||++|||..+.++.||++++++|+|+|+++.
T Consensus 84 ~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 84 VTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp EEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EEEChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence 9999999999998877899999999999999875
No 33
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.88 E-value=6.3e-22 Score=167.78 Aligned_cols=111 Identities=39% Similarity=0.598 Sum_probs=102.9
Q ss_pred cCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEEE
Q 011003 268 DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLT 347 (496)
Q Consensus 268 ~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~ 347 (496)
.|++++++++++|+|...|..++.|.|||.+++.||++|+++.. ...|+.|.+|.+++++||+.+|.+|++||+++|+
T Consensus 17 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~--~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ 94 (128)
T 3o5q_A 17 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHD--RNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLL 94 (128)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHH--HTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEE
T ss_pred CCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCC--CCCCEEEEECCCCccHHHHHHHhcCCCCCEEEEE
Confidence 67899999999999966899999999999999999999998743 4689999999999999999999999999999999
Q ss_pred EcCCCccCCccccccccCCCCCCeEEEEEEEeeeec
Q 011003 348 IAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (496)
Q Consensus 348 i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~~ 383 (496)
|||++|||+.+.. +.|||+++|+|+|+|+++..
T Consensus 95 ip~~~aYG~~g~~---~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 95 CKPEYAYGSAGSL---PKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp ECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEEC
T ss_pred EChHHcCCCCCCC---CCcCCCCEEEEEEEEEEecC
Confidence 9999999998875 57999999999999999863
No 34
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.87 E-value=1.2e-21 Score=180.49 Aligned_cols=107 Identities=50% Similarity=0.923 Sum_probs=101.3
Q ss_pred eecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEE
Q 011003 33 EIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFT 112 (496)
Q Consensus 33 ~~~~~g~~~~~l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ 112 (496)
..+++|++|+++++|+| ..|..||.|.|||++++.||++|++++.++.|+.|.+| ++++||+++|.+|++|++++|+
T Consensus 117 ~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~~v~ 193 (224)
T 1q6h_A 117 KTSSTGLVYQVVEAGKG-EAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLV 193 (224)
T ss_dssp EECTTSCEEEEEECCSS-CCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEGG--GSCHHHHHHGGGSCTTCEEEEE
T ss_pred EECCCceEEEEEecccC-ccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEcC--CcchhHHHHHcCCCCCCEEEEE
Confidence 45789999999999999 78999999999999999999999999987789999995 8999999999999999999999
Q ss_pred ecCCcccCCCCCCCCCCCCCceEEEEEEEEE
Q 011003 113 IPPELAYGESGSPPTIPPNATLQFDVELLSW 143 (496)
Q Consensus 113 ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~ 143 (496)
|||+++||..+.++ ||+|++++|+|+|+++
T Consensus 194 IP~~laYG~~g~~~-IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 194 IPPELAYGKAGVPG-IPPNSTLVFDVELLDV 223 (224)
T ss_dssp ECGGGTTTTTCBTT-BCTTCCEEEEEEEEEE
T ss_pred ECchhhcCcCCCCC-CCCCCEEEEEEEEEEe
Confidence 99999999998764 9999999999999987
No 35
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.86 E-value=2.7e-21 Score=165.23 Aligned_cols=115 Identities=39% Similarity=0.625 Sum_probs=104.9
Q ss_pred eeec--cCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccC
Q 011003 264 SEIT--DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKN 341 (496)
Q Consensus 264 ~d~~--~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~G 341 (496)
.|++ .+++++++++++|+|...|..++.|+|||.+++.||++|+++.. ...|+.|.+|.+++++||+.+|.+|++|
T Consensus 6 ~dv~~~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~--~~~p~~f~lG~~~vi~G~e~~l~gm~~G 83 (135)
T 1r9h_A 6 IDITPKKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRD--RGDQFSFNLGRGNVIKGWDLGVATMTKG 83 (135)
T ss_dssp EECSTTCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHH--HTSCEEEETTTTSSCHHHHHHHTTCCBT
T ss_pred eecccCCCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCc--CCCCEEEEeCCCCccHHHHHHHhcCCCC
Confidence 4556 68899999999999965799999999999999999999998742 3589999999999999999999999999
Q ss_pred cEEEEEEcCCCccCCccccccccCCCCCCeEEEEEEEeeeec
Q 011003 342 EVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (496)
Q Consensus 342 e~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~~ 383 (496)
|+++|+|||++|||+.+.+ ..||++++|+|+|+|+++..
T Consensus 84 e~~~v~ip~~~aYG~~g~~---~~Ip~~~~l~f~v~l~~i~~ 122 (135)
T 1r9h_A 84 EVAEFTIRSDYGYGDAGSP---PKIPGGATLIFEVELFEWSA 122 (135)
T ss_dssp CEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEEC
T ss_pred CEEEEEEChHHcCCCCCCC---CCcCcCCcEEEEEEEEEeec
Confidence 9999999999999998864 57999999999999999975
No 36
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.6e-21 Score=166.69 Aligned_cols=112 Identities=34% Similarity=0.550 Sum_probs=101.8
Q ss_pred eecCCC-eEEEEEEcccCC-CCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEE
Q 011003 33 EIGNQG-LKKKLVKEGEGW-DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAV 110 (496)
Q Consensus 33 ~~~~~g-~~~~~l~~G~G~-~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~ 110 (496)
.++++| ++|+++++|+|. ..++.||.|.+||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|++++
T Consensus 12 ~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~~ 87 (135)
T 2d9f_A 12 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAM 87 (135)
T ss_dssp ESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEE----EEEEEETTSCCSCTTTTTTGGGSCTTCEEE
T ss_pred EECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecC----CCEEEEeCCCChhHHHHHHHhCCCCCCEEE
Confidence 445666 999999999993 38999999999999999999999983 799999999999999999999999999999
Q ss_pred EEecCCcccCCCC-CCCCCCCCCceEEEEEEEEEeecce
Q 011003 111 FTIPPELAYGESG-SPPTIPPNATLQFDVELLSWTSVKD 148 (496)
Q Consensus 111 i~ip~~~ayg~~~-~~~~ip~~~~l~~~v~l~~~~~~~~ 148 (496)
|.|||++|||..+ .+..||++++++|+|+|+++....+
T Consensus 88 v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~~ 126 (135)
T 2d9f_A 88 VTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRPD 126 (135)
T ss_dssp EEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSCS
T ss_pred EEEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCCc
Confidence 9999999999998 6678999999999999999986544
No 37
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.86 E-value=1.1e-21 Score=167.45 Aligned_cols=115 Identities=29% Similarity=0.518 Sum_probs=99.1
Q ss_pred ceeeeccCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEc-CCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhcccc
Q 011003 262 TVSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQ-DGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKK 340 (496)
Q Consensus 262 ~~~d~~~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~-~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~ 340 (496)
.+.+++.+++++++++++|+| ..+..++.|+|||.+++. +|++|++++. ...|+.|.+|.+++++||+.+|.+|++
T Consensus 18 ~~~~v~~~~gl~~~vl~~G~g-~~~~~gd~V~v~Y~g~l~~~G~~fdss~~--~~~p~~f~lG~g~~i~G~e~aL~gm~~ 94 (134)
T 3b7x_A 18 RMLDISGDRGVLKDVIREGAG-DLVAPDASVLVKYSGYLEHMDRPFDSNYF--RKTPRLMKLGEDITLWGMELGLLSMRR 94 (134)
T ss_dssp TCEESSSSSSEEEEEEECCEE-EECCTTCEEEEEEEEECTTCSSCSEEC---------CEEC-CCCCCHHHHHHHHTCEE
T ss_pred ccceeeCCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCeEEEecCC--CCCCEEEEcCCcchhHHHHHHHhCCCC
Confidence 467788899999999999999 677889999999999998 6999998743 468999999999999999999999999
Q ss_pred CcEEEEEEcCCCccCCccccccccCCCCCCeEEEEEEEeeee
Q 011003 341 NEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (496)
Q Consensus 341 Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~ 382 (496)
||+++|+|||++|||+.+.+ +.|||+++|+|+|+|+++.
T Consensus 95 Ge~~~v~ip~~~aYG~~~~~---~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 95 GELARFLFKPNYAYGTLGCP---PLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp TCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEC
T ss_pred CCEEEEEECHHHCcCCCCCC---CCcCcCCeEEEEEEEEEEe
Confidence 99999999999999998765 4699999999999999885
No 38
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.86 E-value=7e-21 Score=157.91 Aligned_cols=109 Identities=30% Similarity=0.498 Sum_probs=99.2
Q ss_pred CcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEEEE
Q 011003 269 DKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTI 348 (496)
Q Consensus 269 d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~i 348 (496)
+.++.++++++|+|..+|..||.|.+||.+++.||++|++++. ...|+.|.+|.+++++||+.+|.+|++||+++|.|
T Consensus 5 ~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~--~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~i 82 (113)
T 1yat_A 5 EGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVD--RGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTI 82 (113)
T ss_dssp GGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTT--TTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEE
T ss_pred CCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCC--CCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEEE
Confidence 5689999999999954499999999999999999999998743 45899999999999999999999999999999999
Q ss_pred cCCCccCCccccccccCCCCCCeEEEEEEEeeee
Q 011003 349 APEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (496)
Q Consensus 349 ~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~ 382 (496)
||++|||+.+.+ +.|||+++|+|+|+|+++.
T Consensus 83 p~~~ayG~~~~~---~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 83 PGPYAYGPRGFP---GLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp CGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEC
T ss_pred CHHHCcCCCCCC---CCcCCCCeEEEEEEEEEeC
Confidence 999999998764 4699999999999999873
No 39
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.86 E-value=4.5e-22 Score=173.59 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=95.3
Q ss_pred ccCcceEEEEEecCCCcCC-CCCCCeEEEEEEEEEcC--CcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcE
Q 011003 267 TDDKKVIKKILKEGDGFER-PNEGAVVKVKLIGKLQD--GTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEV 343 (496)
Q Consensus 267 ~~d~~~~k~il~~G~g~~~-p~~~~~V~v~y~~~~~~--g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~ 343 (496)
+.++++.|+++++|+|... +..|++|+|||.+++.| |++||+++. +++|++|.+|.+++|+||+.+|.+|++||+
T Consensus 7 ~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~--rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~ 84 (165)
T 2lkn_A 7 LREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRA--RGKPMELIIGKKFKLPVWETIVCTMREGEI 84 (165)
T ss_dssp HHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTT--TTCCEEEESSSSCSCSHHHHHHTTCCTTCE
T ss_pred ccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEeccc--CCCCEEEEecCCCccHHHHHHHhcCccCce
Confidence 3567899999999999422 35799999999999965 999999865 679999999999999999999999999999
Q ss_pred EEEEEcCCCccCCcccc-----ccccC-----------------------------CCCCCeEEEEEEEeeeeccc
Q 011003 344 ALLTIAPEYAFGSAESQ-----QELAV-----------------------------VPPNSTVHYEVELVSFEKEK 385 (496)
Q Consensus 344 ~~v~i~~~~~yg~~~~~-----~~~~~-----------------------------ip~~~~l~f~v~l~~~~~~~ 385 (496)
++|+|||++|||+.... ..... +++.++|+|+|||++++...
T Consensus 85 ~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~ 160 (165)
T 2lkn_A 85 AQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPG 160 (165)
T ss_dssp EEEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTT
T ss_pred EEEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCc
Confidence 99999999999942100 00011 23447899999999998643
No 40
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.86 E-value=4.7e-21 Score=157.43 Aligned_cols=107 Identities=32% Similarity=0.597 Sum_probs=97.3
Q ss_pred ceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEEEEcC
Q 011003 271 KVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAP 350 (496)
Q Consensus 271 ~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~i~~ 350 (496)
++.++++++|+|...|..||.|.+||.+++.||++|++++. ...|+.|.+|.+++++||+.+|.+|++||+++|.|||
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~--~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~ 78 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRD--RNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISP 78 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHH--HTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCC--CCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECH
Confidence 47899999999955599999999999999999999998743 3479999999999999999999999999999999999
Q ss_pred CCccCCccccccccCCCCCCeEEEEEEEeeee
Q 011003 351 EYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (496)
Q Consensus 351 ~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~ 382 (496)
++|||+.+.+ +.|||+++++|+|+|++++
T Consensus 79 ~~ayG~~~~~---~~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 79 DYAYGATGHP---GIIPPHATLVFDVELLKLE 107 (107)
T ss_dssp GGTTTTTCBT---TTBCTTCCEEEEEEEEEEC
T ss_pred HHccCCCCCC---CCcCCCCeEEEEEEEEEeC
Confidence 9999998764 4699999999999999873
No 41
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.85 E-value=4.5e-21 Score=162.04 Aligned_cols=115 Identities=21% Similarity=0.372 Sum_probs=102.7
Q ss_pred eccCcceEEEEEecCCC-cCCCCCCCeEEEEEEEEEc-CCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcE
Q 011003 266 ITDDKKVIKKILKEGDG-FERPNEGAVVKVKLIGKLQ-DGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEV 343 (496)
Q Consensus 266 ~~~d~~~~k~il~~G~g-~~~p~~~~~V~v~y~~~~~-~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~ 343 (496)
.+.+.++.++++++|.+ ...|..+|.|.|||.+++. ||++|++++......|+.|.+|.+++++||+++|.+|++||+
T Consensus 8 ~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~ 87 (125)
T 4dip_A 8 LIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEK 87 (125)
T ss_dssp GCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTCE
T ss_pred EECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCCE
Confidence 35577999999999982 2889999999999999998 999999885322468999999999999999999999999999
Q ss_pred EEEEEcCCCccCCccccccccCCCCCCeEEEEEEEeeeecc
Q 011003 344 ALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKE 384 (496)
Q Consensus 344 ~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~~~ 384 (496)
+.|.|||++|||+.+. +.|||+++|+|+|+|+++.+.
T Consensus 88 ~~~~ip~~~aYG~~g~----~~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 88 RKLIIPPALGYGKEGK----GKIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp EEEEECGGGTTTTTCB----TTBCTTCCEEEEEEEEEEECC
T ss_pred EEEEEChHHhcCCCCC----CCCCCCCeEEEEEEEEEEEcC
Confidence 9999999999999875 369999999999999998753
No 42
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.85 E-value=9.3e-21 Score=166.88 Aligned_cols=124 Identities=25% Similarity=0.393 Sum_probs=106.8
Q ss_pred ccCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEE
Q 011003 267 TDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALL 346 (496)
Q Consensus 267 ~~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v 346 (496)
+.+++++++++++|+|..+|..||.|.|||.+++.||++|+++.. .+.|+.|.+ +++++||+.+|.+|++||+++|
T Consensus 34 ~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~--~g~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~~ 109 (167)
T 1jvw_A 34 KLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRE--RGKPTTFRP--NEVIKGWTEALQLMREGDRWRL 109 (167)
T ss_dssp ECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHH--HTSCEEECG--GGSCHHHHHHHTTCCTTCEEEE
T ss_pred ECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeeccc--cCCCEEEEe--CchhHHHHHHHcCCCCCCEEEE
Confidence 456789999999999943499999999999999999999998743 458999998 5899999999999999999999
Q ss_pred EEcCCCccCCccccccccCCCCCCeEEEEEEEeeeeccccccccChHHHHHHH
Q 011003 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTEEKIEAA 399 (496)
Q Consensus 347 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~~~~~~~~~~~~e~~~~a 399 (496)
+|||++|||+.+.+ +.|||+++|+|+|+|+++.+. .+.++.+|.-+..
T Consensus 110 ~Ip~~laYG~~g~~---~~Ipp~s~LiF~VeL~~i~~~--~~~~~~~e~~~~l 157 (167)
T 1jvw_A 110 FIPYDLAYGVTGGG---GMIPPYSPLEFDVELISIKDG--GKGRTAEEVDEIL 157 (167)
T ss_dssp EECGGGTTTTTCSS---SSSCTTCCEEEEEEEEEEGGG--CCSCBHHHHHHHH
T ss_pred EECchhhCCCCCCC---CCcCCCCeEEEEEEEEEEEcC--CCCCCHHHHHHHH
Confidence 99999999998864 579999999999999999853 4556776654433
No 43
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.85 E-value=1.6e-20 Score=159.45 Aligned_cols=114 Identities=39% Similarity=0.641 Sum_probs=101.8
Q ss_pred eeccCcceEEEEEecC-CC-cCCCCCCCeEEEEEEEEE-cCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccC
Q 011003 265 EITDDKKVIKKILKEG-DG-FERPNEGAVVKVKLIGKL-QDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKN 341 (496)
Q Consensus 265 d~~~d~~~~k~il~~G-~g-~~~p~~~~~V~v~y~~~~-~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~G 341 (496)
+.+.++.++++++++| .| ...|..||.|.|||.+++ .+|++|+++.. ...|+.|.+|.+++++||+.+|.+|++|
T Consensus 11 ~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~--~~~p~~f~lG~g~~i~g~e~~l~gm~~G 88 (129)
T 2vn1_A 11 ELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFD--RNVPFKFHLEQGEVIKGWDICVSSMRKN 88 (129)
T ss_dssp ECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGG--TTCCEEEETTSSSSCHHHHHHHTTCCTT
T ss_pred EECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCC--CCccEEEEeCCCCcCHHHHHHHhCCCCC
Confidence 4456778888999977 55 288999999999999999 79999998743 4689999999999999999999999999
Q ss_pred cEEEEEEcCCCccCCccccccccCCCCCCeEEEEEEEeeeec
Q 011003 342 EVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (496)
Q Consensus 342 e~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~~ 383 (496)
|++.|+|||++|||+.+.+ +.|||+++|+|+|+|+++..
T Consensus 89 e~~~v~ip~~~aYG~~~~~---~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 89 EKCLVRIESMYGYGDEGCG---ESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp CEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEEC
T ss_pred CEEEEEEChHHcCCCCCCC---CCcCCCCeEEEEEEEEEEec
Confidence 9999999999999998764 46999999999999999874
No 44
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.85 E-value=1.7e-20 Score=156.79 Aligned_cols=112 Identities=29% Similarity=0.410 Sum_probs=101.9
Q ss_pred ceeeeccCcceEEEEEecCCCc-CCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhcccc
Q 011003 262 TVSEITDDKKVIKKILKEGDGF-ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKK 340 (496)
Q Consensus 262 ~~~d~~~d~~~~k~il~~G~g~-~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~ 340 (496)
.+.+++.++.+.++++++|+|. ..|..++.|++||.+++.+|++|++ ..|+.|.+|.+++++||+.+|.+|++
T Consensus 5 ~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds------~~p~~f~lG~~~~i~g~e~~l~gm~~ 78 (118)
T 2awg_A 5 EWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE------EPELVFTLGDCDVIQALDLSVPLMDV 78 (118)
T ss_dssp CEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEE------EEEEEEETTSSCSCHHHHHHGGGSCT
T ss_pred cceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEEC------CCCEEEEECCCChhHHHHHHHhCCCC
Confidence 3466778888999999999984 3899999999999999999999976 37899999999999999999999999
Q ss_pred CcEEEEEEcCCCccCCccccccccCCCCCCeEEEEEEEeeee
Q 011003 341 NEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (496)
Q Consensus 341 Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~ 382 (496)
||+++|.|||++|||+.+.+ +.|||+++++|+|+|+++.
T Consensus 79 Ge~~~~~ip~~~ayG~~~~~---~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 79 GETAMVTADSKYCYGPQGRS---PYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp TCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEE
T ss_pred CCEEEEEEChHHccCCCCCC---CccCCCCeEEEEEEEEEec
Confidence 99999999999999998764 5699999999999999885
No 45
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.84 E-value=1.7e-20 Score=159.60 Aligned_cols=110 Identities=34% Similarity=0.534 Sum_probs=100.7
Q ss_pred eccCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEE
Q 011003 266 ITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVAL 345 (496)
Q Consensus 266 ~~~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~ 345 (496)
.+.+.++.++++++|+| ..|..||.|.|+|.+++.||++|++++. ...|+.|.+|.+++++||+++|.+|++||+++
T Consensus 24 ~~~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~--~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~ 100 (133)
T 2y78_A 24 VTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKD--RNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRR 100 (133)
T ss_dssp EECTTSCEEEEEECCSS-CBCCTTSEEEEEEEEEETTSCEEEETTT--TTCCEEEETTSSSSCHHHHHHSTTCBTTCEEE
T ss_pred EECCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEeccCc--CCCCEEEEeCCCChhHHHHHHHcCCCCCCEEE
Confidence 34567899999999999 7899999999999999999999998753 46899999999999999999999999999999
Q ss_pred EEEcCCCccCCccccccccCCCCCCeEEEEEEEeee
Q 011003 346 LTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (496)
Q Consensus 346 v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~ 381 (496)
|+||+++|||+.+.. ..|||+++|+|+|+|+++
T Consensus 101 v~ip~~~aYG~~~~~---~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 101 LTIPPQLGYGARGAG---GVIPPNATLVFEVELLDV 133 (133)
T ss_dssp EEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEC
T ss_pred EEECcHHhCCCCCCC---CCCCCCCeEEEEEEEEEC
Confidence 999999999998764 469999999999999875
No 46
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.84 E-value=1.7e-20 Score=163.34 Aligned_cols=115 Identities=29% Similarity=0.398 Sum_probs=102.4
Q ss_pred eeeeccCcceEEEEEecCCCc-CCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccC
Q 011003 263 VSEITDDKKVIKKILKEGDGF-ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKN 341 (496)
Q Consensus 263 ~~d~~~d~~~~k~il~~G~g~-~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~G 341 (496)
+.+.+.++.+.++++++|+|. ..|..||.|+|||.+++.||++|++ ..|+.|.+|.+++++||+.+|.+|++|
T Consensus 36 ~~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds------~~p~~f~lG~g~vi~G~eeaL~gMk~G 109 (157)
T 2jwx_A 36 WLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE------EPELVFTLGDCDVIQALDLSVPLMDVG 109 (157)
T ss_dssp CEESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEE------EEEEEEETTTTSSCHHHHHHTTTSCTT
T ss_pred cceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeec------CCCEEEEeCCCChhHHHHHHHcCCCCC
Confidence 345566777789999999993 3899999999999999999999986 379999999999999999999999999
Q ss_pred cEEEEEEcCCCccCCcc-ccccccCCCCCCeEEEEEEEeeeecccc
Q 011003 342 EVALLTIAPEYAFGSAE-SQQELAVVPPNSTVHYEVELVSFEKEKE 386 (496)
Q Consensus 342 e~~~v~i~~~~~yg~~~-~~~~~~~ip~~~~l~f~v~l~~~~~~~~ 386 (496)
|+++|+||+++|||+.+ .. ..|||+++|+|+|+|+++.....
T Consensus 110 e~~~v~IP~~~aYG~~g~~~---~~IPp~stLiF~VeL~~i~~~~~ 152 (157)
T 2jwx_A 110 ETAMVTADSKYCYGPQGSRS---PYIPPHAALCLEVTLKTAVDLEH 152 (157)
T ss_dssp CEEEEEECGGGTTTTTCCSS---SCCCTTCCEEEEEEEEEEEECSC
T ss_pred CEEEEEECchhcCCcccccC---CCcCCCCeEEEEEEEEEEEcccc
Confidence 99999999999999987 43 56999999999999999986543
No 47
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.84 E-value=1.1e-20 Score=153.74 Aligned_cols=95 Identities=53% Similarity=0.915 Sum_probs=90.2
Q ss_pred CCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEecCCcccCCCCCCCCCCC
Q 011003 51 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPP 130 (496)
Q Consensus 51 ~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~ 130 (496)
..++.||.|.+||++++.||++|++++.+++|+.|.+|.+++++||+++|.+|++|++++|.|||++|||..+.++.||+
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip~ 83 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPG 83 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTTBCT
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCc
Confidence 67899999999999998899999999876789999999999999999999999999999999999999999988778999
Q ss_pred CCceEEEEEEEEEee
Q 011003 131 NATLQFDVELLSWTS 145 (496)
Q Consensus 131 ~~~l~~~v~l~~~~~ 145 (496)
+++++|+|+|+++..
T Consensus 84 ~~~l~f~v~l~~v~~ 98 (102)
T 2pbc_A 84 GATLVFEVELLKIER 98 (102)
T ss_dssp TCCEEEEEEEEEEGG
T ss_pred CCeEEEEEEEEEecc
Confidence 999999999999865
No 48
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=1.4e-20 Score=160.87 Aligned_cols=121 Identities=27% Similarity=0.360 Sum_probs=107.2
Q ss_pred eeeeccCcceEEEEEecCCCc-CCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccC
Q 011003 263 VSEITDDKKVIKKILKEGDGF-ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKN 341 (496)
Q Consensus 263 ~~d~~~d~~~~k~il~~G~g~-~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~G 341 (496)
+.+++.++.+.++++++|+|. ..|..|+.|.|||.+++.||++|++ ..|+.|.+|.+++++||+.+|.+|++|
T Consensus 10 ~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds------~~p~~f~lG~g~~i~G~e~~L~gm~~G 83 (135)
T 2d9f_A 10 WLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE------EPELVFTLGDCDVIQALDLSVPLMDVG 83 (135)
T ss_dssp CEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEE------EEEEEEETTSCCSCTTTTTTGGGSCTT
T ss_pred CcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEec------CCCEEEEeCCCChhHHHHHHHhCCCCC
Confidence 456677888999999999993 3899999999999999999999975 479999999999999999999999999
Q ss_pred cEEEEEEcCCCccCCcc-ccccccCCCCCCeEEEEEEEeeeeccccccccCh
Q 011003 342 EVALLTIAPEYAFGSAE-SQQELAVVPPNSTVHYEVELVSFEKEKESWDMNT 392 (496)
Q Consensus 342 e~~~v~i~~~~~yg~~~-~~~~~~~ip~~~~l~f~v~l~~~~~~~~~~~~~~ 392 (496)
|+++|+||+++|||+.+ .. ..|||+++|+|+|+|+++....+...++.
T Consensus 84 e~~~v~ip~~~aYG~~~~~~---~~Ip~~~~l~f~vel~~v~~~~~~e~~s~ 132 (135)
T 2d9f_A 84 ETAMVTADSKYCYGPQGSRS---PYIPPHAALCLEVTLKTAVDRPDLEMSGP 132 (135)
T ss_dssp CEEEEEECHHHHTCTTCCSS---SCCCTTCCEEEEEEEEEEESSCSSSSCCC
T ss_pred CEEEEEEChhHccCcCCcCC---CccCCCCeEEEEEEEEEeecCCchhhcCc
Confidence 99999999999999987 43 57999999999999999997665554443
No 49
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.83 E-value=2.9e-20 Score=157.56 Aligned_cols=108 Identities=34% Similarity=0.570 Sum_probs=95.9
Q ss_pred CcceEE--EEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEE
Q 011003 269 DKKVIK--KILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALL 346 (496)
Q Consensus 269 d~~~~k--~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v 346 (496)
+.++.+ +++++|+|...|..||.|.|+|.+++.||++|++++. .+.|+.|.+|.+++++||+++|.+|++||+++|
T Consensus 21 ~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~--~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v 98 (130)
T 2lgo_A 21 SMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRS--RGKPFQFTLGAGEVIKGWDQGVATMTLGEKALF 98 (130)
T ss_dssp SSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTT--TTCCEEEETTSTTSCHHHHHHHHHSCTTEEEEE
T ss_pred CCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCc--CCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEE
Confidence 345544 4999999954499999999999999999999998743 458999999999999999999999999999999
Q ss_pred EEcCCCccCCccccccccCCCCCCeEEEEEEEeee
Q 011003 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (496)
Q Consensus 347 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~ 381 (496)
.|||++|||+.+.+ +.|||+++|+|+|+|+++
T Consensus 99 ~ip~~~aYG~~~~~---~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 99 TIPYQLAYGERGYP---PVIPPKATLVFEVELLAV 130 (130)
T ss_dssp EECTTTSTTTTCCS---TTSCSSCCEEEEEEEEEC
T ss_pred EECcHHHCCCCCCC---CCcCCCCeEEEEEEEEEC
Confidence 99999999998764 469999999999999875
No 50
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.83 E-value=3.5e-20 Score=169.28 Aligned_cols=105 Identities=26% Similarity=0.475 Sum_probs=98.0
Q ss_pred ccCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEE
Q 011003 267 TDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALL 346 (496)
Q Consensus 267 ~~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v 346 (496)
+.++++.++++++|+| ..|..+|.|+|||.+++.||++||++ +.|+.|.+| ++++||+.+|.+|++|++++|
T Consensus 114 ~~~sGl~y~vl~~G~G-~~p~~gd~V~V~Y~g~l~dG~vfDss-----~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v 185 (219)
T 3oe2_A 114 ELADGILMTELTPGTG-PKPDANGRVEVRYVGRLPDGKIFDQS-----TQPQWFRLD--SVISGWTSALQNMPTGAKWRL 185 (219)
T ss_dssp ECGGGCEEEEEECCCS-CCCCTTSEEEEEEEEECTTSCEEEEC-----SSCEEEEGG--GSCHHHHHHHTTCCTTCEEEE
T ss_pred ECCCCeEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEeecc-----CCcEEEEec--chhHHHHHHHhCCCCCCEEEE
Confidence 4577899999999999 78999999999999999999999986 689999998 899999999999999999999
Q ss_pred EEcCCCccCCccccccccCCCCCCeEEEEEEEeeee
Q 011003 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (496)
Q Consensus 347 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~ 382 (496)
+|||++|||+.+.+ +.|||+++|+|+|+|+++.
T Consensus 186 ~IPp~lAYG~~g~~---~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 186 VIPSDQAYGAEGAG---DLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp EECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEE
T ss_pred EECchhcCCCCCCC---CCCCCCCeEEEEEEEEEEe
Confidence 99999999999875 4699999999999999986
No 51
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.82 E-value=2.2e-19 Score=164.50 Aligned_cols=111 Identities=33% Similarity=0.526 Sum_probs=102.1
Q ss_pred eeccCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEE
Q 011003 265 EITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVA 344 (496)
Q Consensus 265 d~~~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~ 344 (496)
..+.++++.++++++|+| ..|..|+.|.+||.+++.||++|++++. .+.|+.|.+|.+++++||+.+|.+|++||++
T Consensus 99 ~~~~~sGl~~~vl~~G~G-~~~~~gd~V~v~Y~g~l~dG~~fdss~~--~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~ 175 (209)
T 3uf8_A 99 VVTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKD--RNDPFAFVLGGGMVIKGWDEGVQGMKVGGVR 175 (209)
T ss_dssp CEECTTSCEEEEEECCCS-CBCCTTCEEEEEEEEEETTSCEEEESGG--GTCCEEEETTSSSSCHHHHHHHTTCBTTCEE
T ss_pred ccCCCCceEEEEEEcCCC-CcCCCCCEEEEEEEEEECCCCEEEEccc--cCCCEEEEeCCCccchhHHHHHhCCCCCCEE
Confidence 445678999999999999 6799999999999999999999998753 5789999999999999999999999999999
Q ss_pred EEEEcCCCccCCccccccccCCCCCCeEEEEEEEeee
Q 011003 345 LLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (496)
Q Consensus 345 ~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~ 381 (496)
+|+|||++|||+.+.. +.|||+++|+|+|+|+++
T Consensus 176 ~v~Ipp~~aYG~~g~~---~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 176 RLTIPPQLGYGARGAA---GVIPPNATLVFEVELLDV 209 (209)
T ss_dssp EEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEC
T ss_pred EEEECcHHhCCCCCCC---CCcCCCCeEEEEEEEEEC
Confidence 9999999999998875 469999999999999875
No 52
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.81 E-value=1.8e-19 Score=164.77 Aligned_cols=110 Identities=25% Similarity=0.435 Sum_probs=99.8
Q ss_pred eccCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEE
Q 011003 266 ITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVAL 345 (496)
Q Consensus 266 ~~~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~ 345 (496)
.+.+.++.++++++|+| ..|..||.|+|||.+++.||++|++++. .+.|+.|.+ +++++||+.+|.+|++||+++
T Consensus 102 ~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~--~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~ 176 (213)
T 1fd9_A 102 VVLPSGLQYKVINSGNG-VKPGKSDTVTVEYTGRLIDGTVFDSTEK--TGKPATFQV--SQVIPGWTEALQLMPAGSTWE 176 (213)
T ss_dssp EECTTSCEEEEEECCCS-CCCCTTCEEEEEEEEEETTSCEEEEHHH--HCSCEEEEG--GGSCHHHHHHHTTCCTTCEEE
T ss_pred EECCCccEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEEeeccc--cCCCEEEEc--CchhhHHHHHHcCCCCCCEEE
Confidence 34567899999999999 8899999999999999999999998743 458999999 589999999999999999999
Q ss_pred EEEcCCCccCCccccccccCCCCCCeEEEEEEEeeeec
Q 011003 346 LTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (496)
Q Consensus 346 v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~~ 383 (496)
|+|||++|||+.+.+ +.|||+++|+|+|+|+++.+
T Consensus 177 v~IP~~laYG~~g~~---~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 177 IYVPSGLAYGPRSVG---GPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp EEECGGGTTTTCCCS---SSCCTTCCEEEEEEEEEEEC
T ss_pred EEECchhccCccCCC---CCCCCCCeEEEEEEEEEEEc
Confidence 999999999998764 56999999999999999874
No 53
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.81 E-value=1.3e-19 Score=153.66 Aligned_cols=112 Identities=23% Similarity=0.413 Sum_probs=99.4
Q ss_pred ccCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhc------ccc
Q 011003 267 TDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVIT------MKK 340 (496)
Q Consensus 267 ~~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~------M~~ 340 (496)
+.+.++.++++++|+| ..|..||.|.|||.+++.||++|++++. ...|+.|.+|.+++++||+.+|.+ |++
T Consensus 9 ~~~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~--~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~ 85 (129)
T 1u79_A 9 VSPSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSYN--RGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLT 85 (129)
T ss_dssp ECTTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHHH--HTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBT
T ss_pred ECCCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecCC--CCCCEEEEeCCCCccHHHHHHhcccccccccCC
Confidence 3467899999999999 7899999999999999999999998742 357999999999999999999998 999
Q ss_pred CcEEEEEEcCCCccCCccccc--cccCCCCCCeEEEEEEEeee
Q 011003 341 NEVALLTIAPEYAFGSAESQQ--ELAVVPPNSTVHYEVELVSF 381 (496)
Q Consensus 341 Ge~~~v~i~~~~~yg~~~~~~--~~~~ip~~~~l~f~v~l~~~ 381 (496)
||+++|.|||++|||+.+... ....|||+++|+|+|+|+++
T Consensus 86 Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 86 GGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 999999999999999987531 01469999999999999976
No 54
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.80 E-value=3.8e-20 Score=162.29 Aligned_cols=133 Identities=22% Similarity=0.325 Sum_probs=99.2
Q ss_pred CCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEecCCcccCCCCCCCCCCCC
Q 011003 52 TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPN 131 (496)
Q Consensus 52 ~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~~ 131 (496)
.+++||.|.+||++++.||++|++|+.+++|+.|.+|.+++++||+++|.+|++|++++|.|||++|||.++
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~-------- 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS-------- 95 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC--------
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC--------
Confidence 589999999999999999999999987668999999999999999999999999999999999999999987
Q ss_pred CceEEEEEEEEEeecceeccCccceeEeeeccc---cccCCCCCCeEEEEEEEEeCCCceeeecc
Q 011003 132 ATLQFDVELLSWTSVKDICKDGGIIKKILKEGE---KWENPKDLDEVLVNYEARLEDGMVVGKAD 193 (496)
Q Consensus 132 ~~l~~~v~l~~~~~~~~~~~d~~~~k~i~~~g~---g~~~~~~~d~V~v~y~~~~~~g~~~~~~~ 193 (496)
..+++.+..-.+.....+. .|.++.--...|. +..+...++.|++|+||+||+.++.|.-+
T Consensus 96 ~~lv~~vp~~~f~~~~~~~-~G~~~~~~~~~G~~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~ve 159 (169)
T 4dt4_A 96 PDLIQYFSRREFMDAGEPE-IGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIE 159 (169)
T ss_dssp GGGEEEEEGGGGTTTCCCC-TTCEEEEECTTSCEEEEEEEEEETTEEEEECSCTTTTCCEEEEEE
T ss_pred hHHEEEeCHHHCCCcCCCC-CCcEEEEECCCCCEEEEEEEEEcCCEEEEeCCCccCCCEEEEEEE
Confidence 4555555544332111110 1111110011111 12223345899999999999999988754
No 55
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.80 E-value=4e-19 Score=176.65 Aligned_cols=254 Identities=21% Similarity=0.302 Sum_probs=181.1
Q ss_pred ceeccCccceeEeeeccccccCCCCCCeEEEEEEEEeCCCceeeeccceEEEecCCC---CcchHHHHHhccccCcEEEE
Q 011003 147 KDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKADGVEFTVKDGH---FCPTLAKAVKTMKKGEKVLL 223 (496)
Q Consensus 147 ~~~~~d~~~~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~~~~~~~g~~~---~~~gl~~~l~~m~~ge~~~v 223 (496)
.+++.++++.++|+..|.|..+|..++.|+|||++++ +|++|+++ ++.|.+|.|. ++++|+.+|.+|++||++.+
T Consensus 19 ~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~l 96 (336)
T 1p5q_A 19 SHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIV 96 (336)
T ss_dssp ---CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEE
T ss_pred eeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-CeEEEeCCCCccccchHHHHHHhcCCCCCeEEE
Confidence 4556789999999999999889999999999999999 89998876 8999999886 58899999999999999999
Q ss_pred EecCCCccCCCCCCCCCCCCCCCCCceEEEEEEeeeecceeeeccCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCC
Q 011003 224 AVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDG 303 (496)
Q Consensus 224 ~vp~~~~~g~~~~~~~~~~~~i~~~~~l~~ev~l~~~~~~~d~~~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g 303 (496)
.++|+++||..+... ..||+++++.|++.+.++..-....... +. ..|.... . +..-|
T Consensus 97 ~i~p~~ayg~~g~~~----~~i~~~~~l~f~~~L~~~~~A~~~~~~a------~~-----~~p~~a~---~----~~~~g 154 (336)
T 1p5q_A 97 YLKPSYAFGSVGKEK----FQIPPNAELKYELHLKSFEKAKESWEMN------SE-----EKLEQST---I----VKERG 154 (336)
T ss_dssp EECTTTTTTTTCBGG----GTBCSSCCEEEEEEEEEEECCCCGGGCC------HH-----HHHHHHH---H----HHHHH
T ss_pred EECCccccCcCCCCc----cCCCCCCeEEEEEEEeecccccchhcCC------HH-----HHHHHHH---H----HHHHH
Confidence 999999999988741 2588999999999999886322211100 00 0000000 0 00000
Q ss_pred cEEEEcCCCCCcccEEEEcCc-cchhhHHHHHHhccccCcEEEEEEcCCCccCCccccccccCCCCCCeEEEEEEEeeee
Q 011003 304 TVFVKKGHSEEEQLFEFKTDE-EQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (496)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~lg~-~~~~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~ 382 (496)
.. -+..|+ ...+..++.++..... ... +.
T Consensus 155 ~~-------------~~~~g~~~~A~~~y~~Al~~~p~----------------------------~~~---------~~ 184 (336)
T 1p5q_A 155 TV-------------YFKEGKYKQALLQYKKIVSWLEY----------------------------ESS---------FS 184 (336)
T ss_dssp HH-------------HHHHTCHHHHHHHHHHHHHHTTT----------------------------CCC---------CC
T ss_pred HH-------------HHHCCCHHHHHHHHHHHHHHhhc----------------------------ccc---------CC
Confidence 00 011111 1234445555543210 000 00
Q ss_pred ccccccccChHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhcc
Q 011003 383 KEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK 462 (496)
Q Consensus 383 ~~~~~~~~~~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~ 462 (496)
.....+.....+..+...|..+++.|+|.+|+..|++|+++-+ ....+|.|+|.||++++
T Consensus 185 -----~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~a~~~lg~~~~~~g 244 (336)
T 1p5q_A 185 -----NEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDS---------------NNEKGLSRRGEAHLAVN 244 (336)
T ss_dssp -----SHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTT
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------------CcHHHHHHHHHHHHHCC
Confidence 0000111223456778899999999999999999999999843 33778999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCcchhccccccccc
Q 011003 463 DYKQAEKLCTKKCESSVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 463 ~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~ 494 (496)
+|.+|+.++++||+++|++..+++.+|.++..
T Consensus 245 ~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~ 276 (336)
T 1p5q_A 245 DFELARADFQKVLQLYPNNKAAKTQLAVCQQR 276 (336)
T ss_dssp CHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999887653
No 56
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.79 E-value=6.6e-20 Score=168.58 Aligned_cols=167 Identities=24% Similarity=0.333 Sum_probs=116.4
Q ss_pred CCCCCEEEEEEEEEEcCCCEEEeecCC-------------CccEEEEeCCCcccHHHHHHHccCcCCcEEEEEecCCccc
Q 011003 53 PENGDEVEVHYTGTLLDGTQFDSSRDR-------------STPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAY 119 (496)
Q Consensus 53 ~~~gd~V~v~Y~~~~~dg~~~~~t~~~-------------~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip~~~ay 119 (496)
++.||.|.+||++++ ||++|++|+.. +.|+.|.+|.++++|||+++|.+|++|++++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 679999999999999 99999999752 3799999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCceEEEEEEEEEeecceecc-CccceeEeeecc-ccccCCCCCCeEEEEEEEEeCCCceeeeccceEE
Q 011003 120 GESGSPPTIPPNATLQFDVELLSWTSVKDICK-DGGIIKKILKEG-EKWENPKDLDEVLVNYEARLEDGMVVGKADGVEF 197 (496)
Q Consensus 120 g~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~~-d~~~~k~i~~~g-~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~~~~~ 197 (496)
|.++. .++..+..-.+... ++.. .|..+. ..+ .|..+...++.|++|+||+|||.++.|.-+-+..
T Consensus 81 Ge~~~--------~lv~~vp~~~f~~~-~~~~~vG~~~~---~~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v 148 (231)
T 3prb_A 81 GKRDP--------SKIKLIPLSEFTKR-GIKPIKGLTIT---IDGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEV 148 (231)
T ss_dssp CCCCG--------GGEEEEETHHHHTT-TCCCCTTCEEE---ETTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEE
T ss_pred CCCCh--------HHEEecCHHHCCcc-cCCCCCCcEEE---ecCCCEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEE
Confidence 99873 44444443333210 1110 111111 111 2333444568999999999999999987654444
Q ss_pred EecCCCCcchHHHHHh----ccc---cCcEEEEEecCCCccC
Q 011003 198 TVKDGHFCPTLAKAVK----TMK---KGEKVLLAVKPQYGFG 232 (496)
Q Consensus 198 ~~g~~~~~~gl~~~l~----~m~---~ge~~~v~vp~~~~~g 232 (496)
.-....-+.++-.-.. .|. .++.+.|.+|+++.|-
T Consensus 149 ~eat~eei~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~~~~ 190 (231)
T 3prb_A 149 VDDKKNIVKEIVKMYVPRLSDVKVTIRNGTVKIELPEFAPFI 190 (231)
T ss_dssp CCSHHHHHHHHHHHHCTTCCCCEEEEETTEEEEECCTTGGGS
T ss_pred ecCCHHHHHHHHHHhcCCccceEEEEeCCeEEEEcCHHHhhh
Confidence 3333333333333222 233 3678999999986653
No 57
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.79 E-value=1e-18 Score=160.89 Aligned_cols=106 Identities=30% Similarity=0.535 Sum_probs=96.9
Q ss_pred cCcceEEEEEecCCCcCCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEEE
Q 011003 268 DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLT 347 (496)
Q Consensus 268 ~d~~~~k~il~~G~g~~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~ 347 (496)
.++++.++++++|+| ..|..||.|+|||.+++.||++|++++. .+.|+.|.+ +++++||+.+|.+|++||+++|+
T Consensus 119 ~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~--~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~ 193 (224)
T 1q6h_A 119 SSTGLVYQVVEAGKG-EAPKDSDTVVVNYKGTLIDGKEFDNSYT--RGEPLSFRL--DGVIPGWTEGLKNIKKGGKIKLV 193 (224)
T ss_dssp CTTSCEEEEEECCSS-CCCCTTCEEEEEEEEEETTSCEEEEGGG--GTSCEEEEG--GGSCHHHHHHGGGSCTTCEEEEE
T ss_pred CCCceEEEEEecccC-ccccCCCEEEEEEEEEeCCCCEEeeccc--cCCCEEEEc--CCcchhHHHHHcCCCCCCEEEEE
Confidence 467899999999999 7899999999999999999999999854 458999998 58999999999999999999999
Q ss_pred EcCCCccCCccccccccCCCCCCeEEEEEEEeeee
Q 011003 348 IAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (496)
Q Consensus 348 i~~~~~yg~~~~~~~~~~ip~~~~l~f~v~l~~~~ 382 (496)
|||+++||..+.+ .|||+++|+|+|+|+++.
T Consensus 194 IP~~laYG~~g~~----~IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 194 IPPELAYGKAGVP----GIPPNSTLVFDVELLDVK 224 (224)
T ss_dssp ECGGGTTTTTCBT----TBCTTCCEEEEEEEEEEC
T ss_pred ECchhhcCcCCCC----CCCCCCEEEEEEEEEEeC
Confidence 9999999998764 399999999999999873
No 58
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.79 E-value=4.5e-19 Score=153.87 Aligned_cols=133 Identities=17% Similarity=0.238 Sum_probs=99.8
Q ss_pred CCCCCCCEEEEEEEEEEc-CCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEecCCcccCCCCCCCCCC
Q 011003 51 DTPENGDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIP 129 (496)
Q Consensus 51 ~~~~~gd~V~v~Y~~~~~-dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip 129 (496)
+.++.||.|++||++++. ||++|++|+.. .|+.|.+|.++++|||+++|.+|++|++++|.|||++|||.++
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~-~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~------ 77 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISK-EPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYE------ 77 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTT-CCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSC------
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCC-cCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCC------
Confidence 468899999999999988 99999999863 7999999999999999999999999999999999999999887
Q ss_pred CCCceEEEEEEEEEeecceeccCccceeEeeecc---ccccCCCCCCeEEEEEEEEeCCCceeeeccc
Q 011003 130 PNATLQFDVELLSWTSVKDICKDGGIIKKILKEG---EKWENPKDLDEVLVNYEARLEDGMVVGKADG 194 (496)
Q Consensus 130 ~~~~l~~~v~l~~~~~~~~~~~d~~~~k~i~~~g---~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~~ 194 (496)
..+++.+....+ ....+ ..|..+.--...| .+..+...++.|++|+||+|||.++.|.-+-
T Consensus 78 --~~~v~~v~~~~f-~~~~~-~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAG~~L~F~v~v 141 (151)
T 2kr7_A 78 --SSYLQEVPRDQF-EGIEL-EKGMSVFGQTEDNQTIQAIIKDFSATHVMVDYNHPLAGKTLAFRFKV 141 (151)
T ss_dssp --SCEEEEEEGGGG-TTSCC-CTTCEEEEEETTTEEEEEEEEEECSSEEEEEECCTTSCCCEEEEEEE
T ss_pred --cceEEEEcHHHc-CCCCC-ccCCEEEEECCCCCEEEEEEEEECCCEEEEECCCcCCCCEEEEEEEE
Confidence 456666665444 11111 1111111111111 1112334558999999999999999887543
No 59
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.78 E-value=1e-19 Score=158.09 Aligned_cols=130 Identities=27% Similarity=0.390 Sum_probs=98.0
Q ss_pred CCCCCEEEEEEEEEEcCCCEEEeecCC-------------CccEEEEeCCCcccHHHHHHHccCcCCcEEEEEecCCccc
Q 011003 53 PENGDEVEVHYTGTLLDGTQFDSSRDR-------------STPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAY 119 (496)
Q Consensus 53 ~~~gd~V~v~Y~~~~~dg~~~~~t~~~-------------~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip~~~ay 119 (496)
+++||.|++||++++ ||++|++|+.. +.|+.|.+|.++++|||++||.+|++|++++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 689999999999999 99999999752 3799999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCceEEEEEEEEEeecceecc-CccceeEeeecc-ccccCCCCCCeEEEEEEEEeCCCceeeeccce
Q 011003 120 GESGSPPTIPPNATLQFDVELLSWTSVKDICK-DGGIIKKILKEG-EKWENPKDLDEVLVNYEARLEDGMVVGKADGV 195 (496)
Q Consensus 120 g~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~~-d~~~~k~i~~~g-~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~~~ 195 (496)
|.++ ..++..+..-.+... ++.. .|..+ ...+ .|..+...++.|++|+||+||+.++.|.-+-+
T Consensus 81 G~~~--------~~~V~~v~~~~f~~~-~~~~~~G~~~---~~~~~~~~V~~v~~~~V~vD~NHPLAG~~L~F~v~v~ 146 (157)
T 3pr9_A 81 GKRD--------PSKIKLIPLSEFTKR-GIKPIKGLTI---TIDGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIE 146 (157)
T ss_dssp CCCC--------GGGEEEEEHHHHHHT-TCCCCTTCEE---EETTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEE
T ss_pred CCCC--------hHhEEEcCHHHCCcc-cCCcCCCcEE---EecCCCeEEEEEcCCEEEEECCCccCCCeEEEEEEEE
Confidence 9987 345555544333210 1111 11111 1111 23344445689999999999999998876533
No 60
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.78 E-value=1e-18 Score=142.03 Aligned_cols=96 Identities=31% Similarity=0.518 Sum_probs=88.1
Q ss_pred CCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEEEEcCCCccCCccccccc
Q 011003 284 ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQEL 363 (496)
Q Consensus 284 ~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~ 363 (496)
..|..||.|+|||.+++.||++|++++. ...|+.|.+|.+++++||+.+|.+|++||+++|.||+++|||+.+..
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~--~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~--- 78 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLP--QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAP--- 78 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTT--TTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBT---
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCC--CCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCC---
Confidence 6789999999999999999999998743 46899999999999999999999999999999999999999998764
Q ss_pred cCCCCCCeEEEEEEEeeeecc
Q 011003 364 AVVPPNSTVHYEVELVSFEKE 384 (496)
Q Consensus 364 ~~ip~~~~l~f~v~l~~~~~~ 384 (496)
+.||++++++|+|+|+++...
T Consensus 79 ~~Ip~~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 79 PKIPGGATLVFEVELLKIERR 99 (102)
T ss_dssp TTBCTTCCEEEEEEEEEEGGG
T ss_pred CCcCcCCeEEEEEEEEEeccc
Confidence 469999999999999999753
No 61
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.77 E-value=4e-20 Score=160.47 Aligned_cols=129 Identities=25% Similarity=0.421 Sum_probs=95.8
Q ss_pred CCCCCCEEEEEEEEEEcCCCEEEeecC-------------CCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEecCCcc
Q 011003 52 TPENGDEVEVHYTGTLLDGTQFDSSRD-------------RSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELA 118 (496)
Q Consensus 52 ~~~~gd~V~v~Y~~~~~dg~~~~~t~~-------------~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip~~~a 118 (496)
+++.||.|++||++++.||++|++|+. ...|+.|.+|.+++++||+++|.+|++|++++|.|||++|
T Consensus 1 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~a 80 (151)
T 1ix5_A 1 MVDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKA 80 (151)
T ss_dssp CCCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTS
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHH
Confidence 368999999999999889999999963 2379999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCceEEEEEEEEEeec-ceeccCccceeEeeec-cccccCCCCCCeEEEEEEEEeCCCceeeec
Q 011003 119 YGESGSPPTIPPNATLQFDVELLSWTSV-KDICKDGGIIKKILKE-GEKWENPKDLDEVLVNYEARLEDGMVVGKA 192 (496)
Q Consensus 119 yg~~~~~~~ip~~~~l~~~v~l~~~~~~-~~~~~d~~~~k~i~~~-g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~ 192 (496)
||.++ ..+++.+.+..+... ..+. .+.. +... -.+..+...++.|++||||+|||.++.|.-
T Consensus 81 YG~~~--------~~~v~~v~~~~f~~~~~~~~-~G~~---~~~~~~~~~V~~v~~~~v~vD~NHPLAG~~L~F~v 144 (151)
T 1ix5_A 81 YGNRN--------EMLIQKIPRDAFKEADFEPE-EGMV---ILAEGIPATITEVTDNEVTLDFNHELAGKDLVFTI 144 (151)
T ss_dssp SCSCC--------STTBCCEETHHHHTSTTCCC-TTEE---EESSSCEEEEEEEETTEEEEECCCSSTTCCEEEEC
T ss_pred CCCCC--------ccEEEEEEHHHcCccCCccc-ccCE---EEECCeEEEEEEEcCCEEEEeCCCCCCCCeEEEEE
Confidence 99877 345555555444210 0110 1111 1000 111122334589999999999999998864
No 62
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.76 E-value=6.1e-19 Score=158.60 Aligned_cols=132 Identities=18% Similarity=0.207 Sum_probs=98.8
Q ss_pred CCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEecCCcccCCCCCCCCCCCC
Q 011003 52 TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPN 131 (496)
Q Consensus 52 ~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~~ 131 (496)
++++||.|+|+|++++.||++|++|+.. +|+.|.+|.++++|||+++|.+|++|++++|.|||++|||.++.
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~------- 73 (196)
T 2kfw_A 2 KVAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDE------- 73 (196)
T ss_dssp CCCSSCEEEEEEEEEETTTEEEEECCTT-SCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCT-------
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecCCC-CCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh-------
Confidence 3689999999999998899999999864 79999999999999999999999999999999999999998773
Q ss_pred CceEEEEEEEEEeecceeccCccceeEeeecc--ccccCCCCCCeEEEEEEEEeCCCceeeecc
Q 011003 132 ATLQFDVELLSWTSVKDICKDGGIIKKILKEG--EKWENPKDLDEVLVNYEARLEDGMVVGKAD 193 (496)
Q Consensus 132 ~~l~~~v~l~~~~~~~~~~~d~~~~k~i~~~g--~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~ 193 (496)
.+++.|.+..+.....+. .+.++.-....| .+..+...++.|++||||+||+.++.|+-+
T Consensus 74 -~lV~~vp~~~f~~~~~~~-~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~ve 135 (196)
T 2kfw_A 74 -NLVQRVPKDVFMGVDELQ-VGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVE 135 (196)
T ss_dssp -TTCEEECGGGCCCSSCCC-TTCEEEEEETTEEEEEEBCCCCSSSEEECCCCTTSCCCCEEEEE
T ss_pred -hhEEEEEHHHCCCccCcc-cCCEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEEEEEE
Confidence 344555444342111111 111111111111 122455567999999999999999988754
No 63
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.75 E-value=3.1e-18 Score=151.03 Aligned_cols=135 Identities=19% Similarity=0.205 Sum_probs=97.9
Q ss_pred CCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEecCCcccCCCCCCCCCCCCC
Q 011003 53 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNA 132 (496)
Q Consensus 53 ~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~~~ 132 (496)
++.||.|+++|++++.||++|++|+.. +|+.|.+|.++++|||+++|.+|++|++++|.|||++|||.++.
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~~-------- 73 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDE-------- 73 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCSS-SCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCCT--------
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccCC-cCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCCh--------
Confidence 689999999999998899999999864 79999999999999999999999999999999999999998873
Q ss_pred ceEEEEEEEEEeecceeccCccceeEeeecc--ccccCCCCCCeEEEEEEEEeCCCceeeeccceEE
Q 011003 133 TLQFDVELLSWTSVKDICKDGGIIKKILKEG--EKWENPKDLDEVLVNYEARLEDGMVVGKADGVEF 197 (496)
Q Consensus 133 ~l~~~v~l~~~~~~~~~~~d~~~~k~i~~~g--~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~~~~~ 197 (496)
.+++.+....+.....+. .+..+.-....| .+..+...++.|++|+||+||+.++.|.-+-+..
T Consensus 74 ~~v~~v~~~~f~~~~~~~-~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v 139 (171)
T 2k8i_A 74 NLVQRVPKDVFMGVDELQ-VGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAI 139 (171)
T ss_dssp TSEEEEEGGGGTTSSCCC-TTCEEEEEETTEEEEEEEEEECSSEEEEESCCSSCCCEEEEEEEEEEE
T ss_pred hhEEEeeHHHCCcccCcc-CCcEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEEEEEEEEEe
Confidence 445555443332110111 111111000011 0112223458999999999999999988654433
No 64
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.70 E-value=1.3e-17 Score=145.25 Aligned_cols=130 Identities=20% Similarity=0.262 Sum_probs=97.2
Q ss_pred CCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEecCCcccCCCCCCCCCCCCC
Q 011003 53 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNA 132 (496)
Q Consensus 53 ~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~~~ 132 (496)
++.||.|++||+++ .||++|++|+ +.|.+|.++++|||+++|.+|++|++++|.|||++|||.++ .
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~--------~ 68 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD--------P 68 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC--------G
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC--------c
Confidence 67999999999999 8999999987 89999999999999999999999999999999999999876 5
Q ss_pred ceEEEEEEEEEeecceeccCccceeEeeeccc---cccCCCCCCeEEEEEEEEeCCCceeeeccceEE
Q 011003 133 TLQFDVELLSWTSVKDICKDGGIIKKILKEGE---KWENPKDLDEVLVNYEARLEDGMVVGKADGVEF 197 (496)
Q Consensus 133 ~l~~~v~l~~~~~~~~~~~d~~~~k~i~~~g~---g~~~~~~~d~V~v~y~~~~~~g~~~~~~~~~~~ 197 (496)
.+++.+.+..+.....+. .|..+.--...|. +..+...++.|++|+||+||+.++.|.-+-+..
T Consensus 69 ~lv~~v~~~~f~~~~~~~-~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAGk~L~F~vev~~v 135 (158)
T 3cgm_A 69 EGVQVVPLSAFPEDAEVV-PGAQFYAQDMEGNPMPLTVVAVEGEEVTVDFNHPLAGKDLDFQVEVVKV 135 (158)
T ss_dssp GGEEEEEGGGSCTTSCCC-TTCEEEEEETTTEEEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEE
T ss_pred ceEEEEEHHHCCCCCCCc-cCCEEEEECCCCCEEEEEEEEECCCEEEEeCCccccCCEEEEEEEEEEe
Confidence 677777765553211111 1111111111111 112333458999999999999999987654433
No 65
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.62 E-value=4.5e-16 Score=127.98 Aligned_cols=91 Identities=21% Similarity=0.407 Sum_probs=75.3
Q ss_pred EEcccCCCCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEecCCcccCCCC
Q 011003 44 VKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESG 123 (496)
Q Consensus 44 l~~G~G~~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip~~~ayg~~~ 123 (496)
+++-++ +.++.||.|.+||++++ ||++|+++. ++|+.|.+|.++++|||+++|.+|++|++++|.||+...||..+
T Consensus 22 ~~~v~~-~~~~~gD~V~v~Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~ 97 (113)
T 1hxv_A 22 MVDVSD-KKLANGDIAIIDFTGIV-DNKKLASAS--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKE 97 (113)
T ss_dssp --------CCCSSEEEEEEEEEEE-TTEECSTTC--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSG
T ss_pred EEecCC-CCCCCCCEEEEEEEEEE-CCEEcccCC--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCC
Confidence 333335 57899999999999998 999999986 48999999999999999999999999999999997333499766
Q ss_pred CCCCCCCCCceEEEEEEEEE
Q 011003 124 SPPTIPPNATLQFDVELLSW 143 (496)
Q Consensus 124 ~~~~ip~~~~l~~~v~l~~~ 143 (496)
. ++++++|+|+|+++
T Consensus 98 ~-----~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 98 L-----QSKPVTFEVVLKAI 112 (113)
T ss_dssp G-----GSCCCEEEEEECCB
T ss_pred C-----CCCEEEEEEEEEEE
Confidence 3 57999999999876
No 66
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.55 E-value=1.3e-14 Score=127.19 Aligned_cols=73 Identities=21% Similarity=0.376 Sum_probs=67.2
Q ss_pred CCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEEEEcCCCccCCccc
Q 011003 285 RPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAES 359 (496)
Q Consensus 285 ~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~ 359 (496)
.+..|+.|+|||.+++.||++||+++. .+.|+.|.+|.+++++||+++|.+|++||++.|.|||++|||+.+.
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~--~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~~ 96 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRN--NGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSP 96 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHH--HTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCCG
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCC--CCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCCh
Confidence 578899999999999999999998743 3589999999999999999999999999999999999999998653
No 67
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.53 E-value=3.2e-14 Score=123.41 Aligned_cols=73 Identities=29% Similarity=0.439 Sum_probs=65.1
Q ss_pred CCCCCeEEEEEEEEEcCCcEEEEcCCC-----------CCcccEEEEcCccchhhHHHHHHhccccCcEEEEEEcCCCcc
Q 011003 286 PNEGAVVKVKLIGKLQDGTVFVKKGHS-----------EEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAF 354 (496)
Q Consensus 286 p~~~~~V~v~y~~~~~~g~~~~~~~~~-----------~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~i~~~~~y 354 (496)
...|+.|+|||++++ +|++||+++.. ....|+.|.+|.+++++||+++|.+|++||+++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 467999999999999 99999987531 113799999999999999999999999999999999999999
Q ss_pred CCccc
Q 011003 355 GSAES 359 (496)
Q Consensus 355 g~~~~ 359 (496)
|+.+.
T Consensus 81 G~~~~ 85 (157)
T 3pr9_A 81 GKRDP 85 (157)
T ss_dssp CCCCG
T ss_pred CCCCh
Confidence 99764
No 68
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.52 E-value=1.2e-14 Score=127.85 Aligned_cols=104 Identities=17% Similarity=0.308 Sum_probs=90.3
Q ss_pred hHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccC---CCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHH
Q 011003 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD---TSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAE 468 (496)
Q Consensus 392 ~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~---~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai 468 (496)
.+++++.+..++.+|+.+|+.|+|.+|+..|++|++++... ....+++...+.+....+|+|+|.||+++++|.+|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 45788999999999999999999999999999999986542 233445666778899999999999999999999999
Q ss_pred HHHHHHhcccCCCcchhcccccccccc
Q 011003 469 KLCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 469 ~~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
.+|++||+++|+++++||++|.+|..+
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~~ 110 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIAA 110 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHH
Confidence 999999999999999999999998765
No 69
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.50 E-value=3.6e-14 Score=116.55 Aligned_cols=84 Identities=21% Similarity=0.412 Sum_probs=73.5
Q ss_pred CCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEEEEc-CCCccCCcccccc
Q 011003 284 ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIA-PEYAFGSAESQQE 362 (496)
Q Consensus 284 ~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~i~-~~~~yg~~~~~~~ 362 (496)
..+..||.|+|+|.+++ ||++|+++ ...|+.|.+|.+++++||+++|.+|++||++.|.|+ |.. ||..+.
T Consensus 28 ~~~~~gD~V~v~Y~g~~-dG~~fdss----~~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~-Yg~~~~--- 98 (113)
T 1hxv_A 28 KKLANGDIAIIDFTGIV-DNKKLASA----SAQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSD-YHVKEL--- 98 (113)
T ss_dssp -CCCSSEEEEEEEEEEE-TTEECSTT----CCSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTT-SSSSGG---
T ss_pred CCCCCCCEEEEEEEEEE-CCEEcccC----CccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchh-hCcCCC---
Confidence 56889999999999999 99999876 368999999999999999999999999999999996 443 886542
Q ss_pred ccCCCCCCeEEEEEEEeee
Q 011003 363 LAVVPPNSTVHYEVELVSF 381 (496)
Q Consensus 363 ~~~ip~~~~l~f~v~l~~~ 381 (496)
++++++|+|+|+++
T Consensus 99 -----~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 99 -----QSKPVTFEVVLKAI 112 (113)
T ss_dssp -----GSCCCEEEEEECCB
T ss_pred -----CCCEEEEEEEEEEE
Confidence 56899999999876
No 70
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.48 E-value=1.9e-13 Score=118.37 Aligned_cols=73 Identities=26% Similarity=0.327 Sum_probs=66.9
Q ss_pred CCCCCCCeEEEEEEEEEc-CCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEEEEcCCCccCCccc
Q 011003 284 ERPNEGAVVKVKLIGKLQ-DGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAES 359 (496)
Q Consensus 284 ~~p~~~~~V~v~y~~~~~-~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~ 359 (496)
..+..|+.|++||.+++. +|++|++++. ..|+.|.+|.+++++||+.+|.+|++||++.|.|||+.|||+.+.
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~---~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNIS---KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTT---TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCC---CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 456789999999999998 9999998843 589999999999999999999999999999999999999998753
No 71
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.47 E-value=7.4e-14 Score=121.30 Aligned_cols=103 Identities=15% Similarity=0.105 Sum_probs=85.5
Q ss_pred cChHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHH
Q 011003 390 MNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEK 469 (496)
Q Consensus 390 ~~~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~ 469 (496)
|.+-.....+..++..||.+|+.|+|++|+.+|.+||++.+...... .....+....+|+|+|.|+.++++|.+|+.
T Consensus 2 ~~~~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~---a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~ 78 (159)
T 2hr2_A 2 MKPLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE---AFDHAGFDAFCHAGLAEALAGLRSFDEALH 78 (159)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS---CCCHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh---hhhhccchHHHHHHHHHHHHHCCCHHHHHH
Confidence 33434467899999999999999999999999999999976532211 111234456699999999999999999999
Q ss_pred HHHHHhcc-------cCCCcchh----cccccccccc
Q 011003 470 LCTKKCES-------SVQKGSGI----HSDGRFRFGR 495 (496)
Q Consensus 470 ~~~~al~~-------dp~~~Ka~----~rrg~a~~~l 495 (496)
+|++||++ +|++.+|| ||||.||..|
T Consensus 79 ~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~l 115 (159)
T 2hr2_A 79 SADKALHYFNRRGELNQDEGKLWISAVYSRALALDGL 115 (159)
T ss_dssp HHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHC
Confidence 99999999 99999999 9999999876
No 72
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.44 E-value=3e-13 Score=124.35 Aligned_cols=73 Identities=29% Similarity=0.439 Sum_probs=65.0
Q ss_pred CCCCCeEEEEEEEEEcCCcEEEEcCCC-----------CCcccEEEEcCccchhhHHHHHHhccccCcEEEEEEcCCCcc
Q 011003 286 PNEGAVVKVKLIGKLQDGTVFVKKGHS-----------EEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAF 354 (496)
Q Consensus 286 p~~~~~V~v~y~~~~~~g~~~~~~~~~-----------~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~i~~~~~y 354 (496)
...|+.|++||.+++ ||++||++... ..+.|+.|.+|.+++++||+.+|.+|++||++.|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 467999999999999 99999988531 113799999999999999999999999999999999999999
Q ss_pred CCccc
Q 011003 355 GSAES 359 (496)
Q Consensus 355 g~~~~ 359 (496)
|+.+.
T Consensus 81 Ge~~~ 85 (231)
T 3prb_A 81 GKRDP 85 (231)
T ss_dssp CCCCG
T ss_pred CCCCh
Confidence 99763
No 73
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.44 E-value=5.8e-13 Score=117.32 Aligned_cols=70 Identities=14% Similarity=0.237 Sum_probs=64.9
Q ss_pred CCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEEEEcCCCccCCcc
Q 011003 286 PNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAE 358 (496)
Q Consensus 286 p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~ 358 (496)
+..|+.|+++|.+++.+|++|++++. ..|+.|.+|.+++++||+.+|.+|++||++.|.|||+.|||+.+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~---~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPV---SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCS---SSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccC---CcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 56799999999999999999998743 48999999999999999999999999999999999999999874
No 74
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.43 E-value=9.4e-14 Score=120.30 Aligned_cols=74 Identities=32% Similarity=0.534 Sum_probs=66.0
Q ss_pred CCCCCeEEEEEEEEEcCCcEEEEcCC----------C-CCcccEEEEcCccchhhHHHHHHhccccCcEEEEEEcCCCcc
Q 011003 286 PNEGAVVKVKLIGKLQDGTVFVKKGH----------S-EEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAF 354 (496)
Q Consensus 286 p~~~~~V~v~y~~~~~~g~~~~~~~~----------~-~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~i~~~~~y 354 (496)
+..|+.|++||.+++.+|++|++++. . ....|+.|.+|.+++++||+.+|.+|++||++.|.|||+.||
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aY 81 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAY 81 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSS
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHC
Confidence 56799999999999999999999842 0 124799999999999999999999999999999999999999
Q ss_pred CCccc
Q 011003 355 GSAES 359 (496)
Q Consensus 355 g~~~~ 359 (496)
|+.+.
T Consensus 82 G~~~~ 86 (151)
T 1ix5_A 82 GNRNE 86 (151)
T ss_dssp CSCCS
T ss_pred CCCCc
Confidence 98764
No 75
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.43 E-value=4.5e-13 Score=120.38 Aligned_cols=70 Identities=14% Similarity=0.237 Sum_probs=65.0
Q ss_pred CCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEEEEcCCCccCCcc
Q 011003 286 PNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAE 358 (496)
Q Consensus 286 p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~ 358 (496)
+..++.|+|+|++++.+|++|++++. ..|+.|.+|.+++++||+++|.+|++||+++|.|||+.|||+.+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~---~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~ 72 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESPV---SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECCT---TSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCC---CCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC
Confidence 56799999999999999999998843 48999999999999999999999999999999999999999865
No 76
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.41 E-value=1.1e-13 Score=116.63 Aligned_cols=84 Identities=27% Similarity=0.339 Sum_probs=76.6
Q ss_pred HHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhc
Q 011003 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCE 476 (496)
Q Consensus 397 ~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 476 (496)
+.+..++++|+.+|++|+|.+|+..|++|+++-+ ....+|.|+|.||+++++|.+|+.+|++||+
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDP---------------ENAILYSNRAACLTKLMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------------CCHHHHHHHhhHHHhhccHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999833 3478899999999999999999999999999
Q ss_pred ccCCCcchhcccccccccc
Q 011003 477 SSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 477 ~dp~~~Ka~~rrg~a~~~l 495 (496)
++|+++++|+++|.+|..+
T Consensus 76 ~~p~~~~a~~~lg~~~~~~ 94 (126)
T 4gco_A 76 LDSKFIKGYIRKAACLVAM 94 (126)
T ss_dssp HCTTCHHHHHHHHHHHHHT
T ss_pred hhhhhhHHHHHHHHHHHHC
Confidence 9999999999999988765
No 77
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.34 E-value=3.2e-12 Score=111.16 Aligned_cols=66 Identities=18% Similarity=0.335 Sum_probs=61.2
Q ss_pred CCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEEEEcCCCccCCccc
Q 011003 286 PNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAES 359 (496)
Q Consensus 286 p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~ 359 (496)
+..|+.|+++|.++ .+|++|++++ +.|.+|.+++++||+.+|.+|++||++.|.|||+.|||+.+.
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-------~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~~ 68 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-------LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDP 68 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-------EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCCG
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-------EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCCc
Confidence 46789999999999 8999999872 899999999999999999999999999999999999998753
No 78
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.33 E-value=4e-12 Score=115.47 Aligned_cols=123 Identities=25% Similarity=0.326 Sum_probs=98.9
Q ss_pred EEEEEEeeeeccccccccChHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChH-HHHHHHHHHHHhh
Q 011003 373 HYEVELVSFEKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDE-EKKQAKALKVACN 451 (496)
Q Consensus 373 ~f~v~l~~~~~~~~~~~~~~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~-~~~~~~~~~~~~~ 451 (496)
.....+..+++.++.|+++.+++...+..++..|+.+++.|+|.+|+..|.+|+++.+........ .......+...++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (198)
T 2fbn_A 12 SGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCN 91 (198)
T ss_dssp ----------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHH
Confidence 334556678889999999999999999999999999999999999999999999987655433222 2333355567899
Q ss_pred hHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhcccccccccc
Q 011003 452 LNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 452 ~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
.|+|.||+++++|.+|+.+|+++|+++|++.++|+++|.+|..+
T Consensus 92 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 135 (198)
T 2fbn_A 92 LNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYF 135 (198)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999988654
No 79
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.27 E-value=1.4e-12 Score=109.92 Aligned_cols=84 Identities=21% Similarity=0.334 Sum_probs=72.8
Q ss_pred HHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHH
Q 011003 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKK 474 (496)
Q Consensus 395 ~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 474 (496)
..+.+..+++.||.+|++|+|.+|+..|++|+++-+ ....+|+|+|.||+++++|.+|+.+|++|
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p---------------~~~~~~~nlg~~~~~~~~~~~A~~~~~~a 68 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDP---------------SNITFYNNKAAVYFEEKKFAECVQFCEKA 68 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------------CCHHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 456788899999999999999999999999999833 33788999999999999999999999999
Q ss_pred hcccCCCcc-------hhcccccccc
Q 011003 475 CESSVQKGS-------GIHSDGRFRF 493 (496)
Q Consensus 475 l~~dp~~~K-------a~~rrg~a~~ 493 (496)
|+++|++.. +|+++|.++.
T Consensus 69 l~~~~~~~~~~~~~a~~~~~lg~~~~ 94 (127)
T 4gcn_A 69 VEVGRETRADYKLIAKAMSRAGNAFQ 94 (127)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHhCcccchhhHHHHHHHHHHHHHHH
Confidence 999998865 5566665554
No 80
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.22 E-value=9e-12 Score=126.71 Aligned_cols=99 Identities=25% Similarity=0.441 Sum_probs=86.8
Q ss_pred CCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEecCCcccCCCCCCCCCCC
Q 011003 51 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPP 130 (496)
Q Consensus 51 ~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~ 130 (496)
..++.||.|.+||+++. ||+.|+++. +.|+.|.+|.++++|||+++|.||++|+++.|.+|+..+||..+. +
T Consensus 156 ~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l-----a 227 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL-----K 227 (432)
T ss_dssp SCCCTTCEEEECEEEES-SSCBCSSCC--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT-----S
T ss_pred CCCCCCCEEEEEEEEee-CCeEccCCC--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC-----C
Confidence 56899999999999995 999999987 489999999999999999999999999999999999999998764 5
Q ss_pred CCceEEEEEEEEEeecceeccCcccee
Q 011003 131 NATLQFDVELLSWTSVKDICKDGGIIK 157 (496)
Q Consensus 131 ~~~l~~~v~l~~~~~~~~~~~d~~~~k 157 (496)
|.+++|.|+|.++........|..+.+
T Consensus 228 g~~~~F~V~v~~v~~~~lpeldDEfak 254 (432)
T 1w26_A 228 GKAAKFAINLKKVEERELPELTAEFIK 254 (432)
T ss_dssp SCEEEEEEECCEECCEECCCCSHHHHT
T ss_pred CceEEEEEEEEEEeccCCCCcchHHHH
Confidence 689999999999986555555555554
No 81
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.17 E-value=3e-11 Score=121.28 Aligned_cols=105 Identities=25% Similarity=0.425 Sum_probs=90.9
Q ss_pred ChHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCC-CCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHH
Q 011003 391 NTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-SFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEK 469 (496)
Q Consensus 391 ~~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~ 469 (496)
+.++.++.+..++..|+.+++.|+|.+|+..|++|+++++... ....++.....+....+|+|+|.||+++++|.+|+.
T Consensus 215 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 215 DVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 5778899999999999999999999999999999999764421 112233334678889999999999999999999999
Q ss_pred HHHHHhcccCCCcchhcccccccccc
Q 011003 470 LCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 470 ~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
+|++||+++|++.++||++|.+|..+
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~ 320 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGL 320 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHc
Confidence 99999999999999999999998765
No 82
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.13 E-value=3.4e-11 Score=100.56 Aligned_cols=83 Identities=19% Similarity=0.207 Sum_probs=76.1
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.+..+...|+.+++.|+|.+|+..|++++++.+. ...++.|+|.||+++++|.+|+.+++++|++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~---------------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE---------------DARGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---------------ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 4678899999999999999999999999998433 3688999999999999999999999999999
Q ss_pred cCCCcchhcccccccccc
Q 011003 478 SVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 478 dp~~~Ka~~rrg~a~~~l 495 (496)
+|++.++|+++|.++..+
T Consensus 68 ~p~~~~~~~~lg~~~~~~ 85 (126)
T 3upv_A 68 DPNFVRAYIRKATAQIAV 85 (126)
T ss_dssp CTTCHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHHHH
Confidence 999999999999988754
No 83
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.11 E-value=2.8e-11 Score=121.45 Aligned_cols=100 Identities=20% Similarity=0.429 Sum_probs=86.5
Q ss_pred CCCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEecCCcccCCCCCCCCCCC
Q 011003 51 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPP 130 (496)
Q Consensus 51 ~~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~ 130 (496)
..++.||.|.+||+++ .||+.|+++. +.|+.|.+|.++++|||+++|.||++|+++.|.|++...||..+. +
T Consensus 159 ~~~~~gD~V~i~y~g~-~dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l-----a 230 (392)
T 1t11_A 159 EAAENGKRVSIDFVGS-IDGVEFEGGK--AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL-----K 230 (392)
T ss_dssp CCCCTTCEEEEEEEEE-SSSSCCTTCE--EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT-----S
T ss_pred CCCCCCCEEEEEEEEE-ECCEEccCCC--ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC-----C
Confidence 4689999999999999 4999999885 479999999999999999999999999999999987778987653 6
Q ss_pred CCceEEEEEEEEEeecceeccCccceeE
Q 011003 131 NATLQFDVELLSWTSVKDICKDGGIIKK 158 (496)
Q Consensus 131 ~~~l~~~v~l~~~~~~~~~~~d~~~~k~ 158 (496)
|.++.|+|+|.++........|..+.+.
T Consensus 231 Gk~~~F~V~v~~i~~~~lpeldDEfak~ 258 (392)
T 1t11_A 231 GKAAKFAIKVNKVEARELPELNDEFVAR 258 (392)
T ss_dssp SCEEEECCCEEEEEEEECCCCSTGGGGG
T ss_pred CCeEEEEEEEEEEEcCCCCCcCHHHHHH
Confidence 7999999999999876666666666653
No 84
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.02 E-value=2e-10 Score=99.91 Aligned_cols=84 Identities=12% Similarity=0.124 Sum_probs=76.5
Q ss_pred HHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhc
Q 011003 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCE 476 (496)
Q Consensus 397 ~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 476 (496)
..+..+...|..+++.|+|.+|+..|++++++ ++....+|.|+|.||.++++|.+|+.++++|++
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~---------------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY---------------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFA 98 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 34567788999999999999999999999998 344488999999999999999999999999999
Q ss_pred ccCCCcchhcccccccccc
Q 011003 477 SSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 477 ~dp~~~Ka~~rrg~a~~~l 495 (496)
++|+++.+||++|.+|..+
T Consensus 99 l~P~~~~~~~~lg~~~~~l 117 (151)
T 3gyz_A 99 LGKNDYTPVFHTGQCQLRL 117 (151)
T ss_dssp HSSSCCHHHHHHHHHHHHT
T ss_pred hCCCCcHHHHHHHHHHHHc
Confidence 9999999999999998765
No 85
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.00 E-value=2.4e-10 Score=92.52 Aligned_cols=82 Identities=26% Similarity=0.283 Sum_probs=73.5
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.+..+...|+.+++.|+|.+|+..|.+|++..+. ...++.|+|.|++++++|.+|+.+|+++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~---------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ---------------NPVGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC---------------CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 3566788999999999999999999999998433 2678999999999999999999999999999
Q ss_pred cCCC------cchhccccccccc
Q 011003 478 SVQK------GSGIHSDGRFRFG 494 (496)
Q Consensus 478 dp~~------~Ka~~rrg~a~~~ 494 (496)
+|++ .++++++|.++..
T Consensus 68 ~p~~~~~~~~~~~~~~~~~~~~~ 90 (111)
T 2l6j_A 68 TSTAEHVAIRSKLQYRLELAQGA 90 (111)
T ss_dssp CSSTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHH
Confidence 9999 9999999988754
No 86
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=98.97 E-value=6e-10 Score=113.26 Aligned_cols=87 Identities=14% Similarity=0.245 Sum_probs=78.0
Q ss_pred CCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEEEEcCCCccCCccccccc
Q 011003 284 ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQEL 363 (496)
Q Consensus 284 ~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~ 363 (496)
..+..||.|++||.++ .||+.|+++ ...|+.|.+|.|.+++||+.+|.+|++||++.|.+|+..+||..+.
T Consensus 156 ~~~~~gD~V~i~y~g~-~dG~~fd~~----~~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l---- 226 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGS-VDGEEFEGG----KASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL---- 226 (432)
T ss_dssp SCCCTTCEEEECEEEE-SSSCBCSSC----CCSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT----
T ss_pred CCCCCCCEEEEEEEEe-eCCeEccCC----CccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC----
Confidence 4578999999999999 499999765 3689999999999999999999999999999999999999996542
Q ss_pred cCCCCCCeEEEEEEEeeeec
Q 011003 364 AVVPPNSTVHYEVELVSFEK 383 (496)
Q Consensus 364 ~~ip~~~~l~f~v~l~~~~~ 383 (496)
+|.+++|+|+|+++..
T Consensus 227 ----ag~~~~F~V~v~~v~~ 242 (432)
T 1w26_A 227 ----KGKAAKFAINLKKVEE 242 (432)
T ss_dssp ----SSCEEEEEEECCEECC
T ss_pred ----CCceEEEEEEEEEEec
Confidence 5789999999999985
No 87
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.96 E-value=4.6e-10 Score=98.36 Aligned_cols=85 Identities=18% Similarity=0.125 Sum_probs=73.8
Q ss_pred HHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHh
Q 011003 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKC 475 (496)
Q Consensus 396 ~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 475 (496)
...+..+...|+.+++.|+|.+|+..|.+++++.+. ...++.|+|.||+++++|.+|+.+++++|
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~---------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al 72 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA---------------NPIYLSNRAAAYSASGQHEKAAEDAELAT 72 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc---------------CHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 345778899999999999999999999999998433 36788899999999999999999999999
Q ss_pred cccCCCcchhcccccccccc
Q 011003 476 ESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 476 ~~dp~~~Ka~~rrg~a~~~l 495 (496)
+++|++..+|+++|.+|+.+
T Consensus 73 ~~~p~~~~~~~~lg~~~~~~ 92 (164)
T 3sz7_A 73 VVDPKYSKAWSRLGLARFDM 92 (164)
T ss_dssp HHCTTCHHHHHHHHHHHHHT
T ss_pred HhCCCCHHHHHHHHHHHHHc
Confidence 99999999999998887654
No 88
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=98.83 E-value=1.5e-09 Score=108.89 Aligned_cols=130 Identities=12% Similarity=0.206 Sum_probs=92.2
Q ss_pred CCCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEEEEcCCCccCCccccccc
Q 011003 284 ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQEL 363 (496)
Q Consensus 284 ~~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~ 363 (496)
..+..||.|++||.++ .||+.|+++ ...++.|.+|.|.+++||+.+|.+|++||++.|.++....||..+
T Consensus 159 ~~~~~gD~V~i~y~g~-~dG~~fd~~----~~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~----- 228 (392)
T 1t11_A 159 EAAENGKRVSIDFVGS-IDGVEFEGG----KAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAEN----- 228 (392)
T ss_dssp CCCCTTCEEEEEEEEE-SSSSCCTTC----EEEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTT-----
T ss_pred CCCCCCCEEEEEEEEE-ECCEEccCC----CccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCC-----
Confidence 4578999999999999 589998764 468999999999999999999999999999999998656777532
Q ss_pred cCCCCCCeEEEEEEEeeeeccc--c---ccccChHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHh
Q 011003 364 AVVPPNSTVHYEVELVSFEKEK--E---SWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAV 426 (496)
Q Consensus 364 ~~ip~~~~l~f~v~l~~~~~~~--~---~~~~~~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al 426 (496)
.+|.+++|+|+|+++.... + .|.............+|+.-.....+..-..+......++
T Consensus 229 ---laGk~~~F~V~v~~i~~~~lpeldDEfak~~~~~~~tleelk~~ir~~l~~~~~~~~~~~~~~~v 293 (392)
T 1t11_A 229 ---LKGKAAKFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQA 293 (392)
T ss_dssp ---TSSCEEEECCCEEEEEEEECCCCSTGGGGGGSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ---CCCCeEEEEEEEEEEEcCCCCCcCHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2678999999999998521 1 1111111113445555555555554444444444444433
No 89
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.82 E-value=3e-09 Score=91.87 Aligned_cols=83 Identities=10% Similarity=0.077 Sum_probs=74.0
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.+..+...|..+++.|+|.+|+..|.+++..-+ ....++.|+|.|+.++++|.+|+..+++++++
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDH---------------YDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCc---------------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 455677889999999999999999999999833 33778899999999999999999999999999
Q ss_pred cCCCcchhcccccccccc
Q 011003 478 SVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 478 dp~~~Ka~~rrg~a~~~l 495 (496)
+|+++.+||.+|.+|..+
T Consensus 85 ~p~~~~~~~~lg~~~~~~ 102 (148)
T 2vgx_A 85 DIXEPRFPFHAAECLLQX 102 (148)
T ss_dssp STTCTHHHHHHHHHHHHT
T ss_pred CCCCchHHHHHHHHHHHc
Confidence 999999999999988754
No 90
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.79 E-value=4.3e-09 Score=88.26 Aligned_cols=80 Identities=11% Similarity=0.158 Sum_probs=71.0
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..+++.|+|.+|+..|++|+++ ++....+|.|+|.||.++++|.+|+.+++++|+++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---------------~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~ 111 (126)
T 4gco_A 47 AILYSNRAACLTKLMEFQRALDDCDTCIRL---------------DSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD 111 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhHHHhhccHHHHHHHHHHHHHh---------------hhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 344567899999999999999999999998 33347789999999999999999999999999999
Q ss_pred CCCcchhcccccccc
Q 011003 479 VQKGSGIHSDGRFRF 493 (496)
Q Consensus 479 p~~~Ka~~rrg~a~~ 493 (496)
|+|..|+...+.+++
T Consensus 112 P~~~~a~~~l~~~lr 126 (126)
T 4gco_A 112 PSNEEAREGVRNCLR 126 (126)
T ss_dssp TTCHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHhcC
Confidence 999999988887763
No 91
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.78 E-value=8.3e-09 Score=86.75 Aligned_cols=82 Identities=29% Similarity=0.328 Sum_probs=74.3
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..+++.|+|.+|+..|.++++..+. ...++.|+|.|++++++|.+|+..++++++++
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~---------------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 73 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL---------------VAVYYTNRALCYLKMQQPEQALADCRRALELD 73 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC---------------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 566788999999999999999999999998433 26789999999999999999999999999999
Q ss_pred CCCcchhcccccccccc
Q 011003 479 VQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 479 p~~~Ka~~rrg~a~~~l 495 (496)
|++..+|+++|.++..+
T Consensus 74 p~~~~~~~~l~~~~~~~ 90 (137)
T 3q49_B 74 GQSVKAHFFLGQCQLEM 90 (137)
T ss_dssp TTCHHHHHHHHHHHHHT
T ss_pred chhHHHHHHHHHHHHHH
Confidence 99999999999888654
No 92
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.77 E-value=5.4e-09 Score=89.27 Aligned_cols=83 Identities=16% Similarity=0.141 Sum_probs=73.5
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
....+...|..+++.|+|.+|+..|.++++.-+ ....++.++|.||.++++|.+|+..+++++++
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDH---------------YDARYFLGLGACRQSLGLYEQALQSYSYGALM 81 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCC---------------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 345667889999999999999999999999833 33778999999999999999999999999999
Q ss_pred cCCCcchhcccccccccc
Q 011003 478 SVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 478 dp~~~Ka~~rrg~a~~~l 495 (496)
+|+++.+++.+|.+|..+
T Consensus 82 ~p~~~~~~~~lg~~~~~~ 99 (142)
T 2xcb_A 82 DINEPRFPFHAAECHLQL 99 (142)
T ss_dssp CTTCTHHHHHHHHHHHHT
T ss_pred CCCCcHHHHHHHHHHHHc
Confidence 999999999999888754
No 93
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.77 E-value=4.1e-09 Score=91.19 Aligned_cols=82 Identities=9% Similarity=-0.081 Sum_probs=70.8
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
........|+.+++.|+|++|+..|++|+++- +....+|.|+|.||.++++|.+|+.++.++|++
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~---------------p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~ 94 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQ---------------ERDPKAHRFLGLLYELEENTDKAVECYRRSVEL 94 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------------CCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Confidence 34445567999999999999999999999983 334788999999999999999999999999999
Q ss_pred cCCCcchhccccccccc
Q 011003 478 SVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 478 dp~~~Ka~~rrg~a~~~ 494 (496)
+|+++.+|+++|.+|..
T Consensus 95 ~p~~~~~~~~la~~~~~ 111 (150)
T 4ga2_A 95 NPTQKDLVLKIAELLCK 111 (150)
T ss_dssp CTTCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 99999999999887754
No 94
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.75 E-value=9.8e-09 Score=98.68 Aligned_cols=82 Identities=29% Similarity=0.328 Sum_probs=75.0
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..++..|+.+++.|+|.+|+..|++|++..+. ...++.|+|.||+++++|.+|+.++++|++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~---------------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 68 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL---------------VAVYYTNRALCYLKMQQPEQALADCRRALELD 68 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc---------------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 457889999999999999999999999998443 37889999999999999999999999999999
Q ss_pred CCCcchhcccccccccc
Q 011003 479 VQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 479 p~~~Ka~~rrg~a~~~l 495 (496)
|++.++|+++|.+|..+
T Consensus 69 p~~~~~~~~lg~~~~~~ 85 (281)
T 2c2l_A 69 GQSVKAHFFLGQCQLEM 85 (281)
T ss_dssp TTCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHc
Confidence 99999999999988754
No 95
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.70 E-value=2.6e-08 Score=77.11 Aligned_cols=82 Identities=22% Similarity=0.249 Sum_probs=72.4
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..++..++|.+|+..|.++++..+.. ..++.|+|.|+.++++|.+|+..++++++++
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 73 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 4556778999999999999999999999974322 5678999999999999999999999999999
Q ss_pred CCCcchhcccccccccc
Q 011003 479 VQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 479 p~~~Ka~~rrg~a~~~l 495 (496)
|++..+++.+|.++..+
T Consensus 74 p~~~~~~~~l~~~~~~~ 90 (91)
T 1na3_A 74 PNNAEAKQNLGNAKQKQ 90 (91)
T ss_dssp TTCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhc
Confidence 99999999999887653
No 96
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.69 E-value=9.2e-09 Score=85.49 Aligned_cols=79 Identities=9% Similarity=-0.075 Sum_probs=71.4
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..+++.|+|.+|+..|.++++.-+ ....++.++|.|+.+++++.+|+..+++|++++|+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P---------------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 83 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEP---------------EREEAWRSLGLTQAENEKDGLAIIALNHARMLDPK 83 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHST---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCC---------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 456788999999999999999999999843 34788999999999999999999999999999999
Q ss_pred Ccchhccccccccc
Q 011003 481 KGSGIHSDGRFRFG 494 (496)
Q Consensus 481 ~~Ka~~rrg~a~~~ 494 (496)
+..+++.+|.+|..
T Consensus 84 ~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 84 DIAVHAALAVSHTN 97 (121)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999988764
No 97
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.67 E-value=3.1e-08 Score=83.95 Aligned_cols=84 Identities=27% Similarity=0.355 Sum_probs=73.6
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..++..|+|.+|+..|+++++..+. ......++.|+|.||+++++|.+|+..|+++++++
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 95 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDAT------------PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD 95 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc------------chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 566788999999999999999999999987432 23457889999999999999999999999999999
Q ss_pred CCCcchhccccccccc
Q 011003 479 VQKGSGIHSDGRFRFG 494 (496)
Q Consensus 479 p~~~Ka~~rrg~a~~~ 494 (496)
|++..+|+++|.++..
T Consensus 96 ~~~~~~~~~~a~~~~~ 111 (148)
T 2dba_A 96 GGDVKALYRRSQALEK 111 (148)
T ss_dssp SCCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHH
Confidence 9999999999988764
No 98
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.66 E-value=4.5e-08 Score=84.69 Aligned_cols=89 Identities=21% Similarity=0.184 Sum_probs=73.5
Q ss_pred hHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHH
Q 011003 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLC 471 (496)
Q Consensus 392 ~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~ 471 (496)
.....+.+..+...|+.++..|+|.+|+..|.++++..+.. ..++.|+|.|++++++|.+|+..+
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~ 70 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------AIYYGNRSLAYLRTECYGYALGDA 70 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHcCCHHHHHHHH
Confidence 45678889999999999999999999999999999974332 567778888888888888888888
Q ss_pred HHHhcccCCCcchhcccccccccc
Q 011003 472 TKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 472 ~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
+++++++|++..+|+++|.++..+
T Consensus 71 ~~a~~~~~~~~~~~~~~a~~~~~~ 94 (166)
T 1a17_A 71 TRAIELDKKYIKGYYRRAASNMAL 94 (166)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHhCcccHHHHHHHHHHHHHh
Confidence 888888888888888888776543
No 99
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.61 E-value=4.9e-08 Score=78.88 Aligned_cols=81 Identities=22% Similarity=0.208 Sum_probs=56.8
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.+..+...|..++..|+|.+|+..|.++++..+.. ..++.++|.|++++++|.+|+..+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHN---------------HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 35566778888888888888888888888764322 455666666666667777777777777666
Q ss_pred cCCCcchhcccccccc
Q 011003 478 SVQKGSGIHSDGRFRF 493 (496)
Q Consensus 478 dp~~~Ka~~rrg~a~~ 493 (496)
+|++..+++.+|.++.
T Consensus 68 ~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 68 KPDWGKGYSRKAAALE 83 (118)
T ss_dssp CTTCHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHH
Confidence 6666666666666554
No 100
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.59 E-value=5e-08 Score=89.06 Aligned_cols=95 Identities=8% Similarity=0.057 Sum_probs=52.9
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChH-HHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDE-EKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~-~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
+..+..+|..++..|+|.+|+..|+++++.-+......-. ...........++.|+|.||.++++|.+|+..++++|++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4567789999999999999999999999873221000000 000000001111222555555555555555555555555
Q ss_pred cCCCcchhcccccccc
Q 011003 478 SVQKGSGIHSDGRFRF 493 (496)
Q Consensus 478 dp~~~Ka~~rrg~a~~ 493 (496)
+|+++.+|+.+|.+++
T Consensus 84 ~p~~~~~~~~lg~~~~ 99 (208)
T 3urz_A 84 APNNVDCLEACAEMQV 99 (208)
T ss_dssp CTTCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 5555555555555443
No 101
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.58 E-value=2.4e-08 Score=86.21 Aligned_cols=75 Identities=12% Similarity=-0.026 Sum_probs=67.1
Q ss_pred hhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchh
Q 011003 406 GNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGI 485 (496)
Q Consensus 406 Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~ 485 (496)
|+.+..+|++++|+..|++++.. .+.....+.++|.+|+++++|.+|+..++++|+++|+++.+|
T Consensus 4 G~~~~~~~~~e~ai~~~~~a~~~---------------~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~ 68 (150)
T 4ga2_A 4 GSMRRSKADVERYIASVQGSTPS---------------PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAH 68 (150)
T ss_dssp ---CCCHHHHHHHHHHHHHHSCS---------------HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHcChHHHHHHHHHHhccc---------------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 66777899999999999999997 677788899999999999999999999999999999999999
Q ss_pred cccccccccc
Q 011003 486 HSDGRFRFGR 495 (496)
Q Consensus 486 ~rrg~a~~~l 495 (496)
+.+|.+|..+
T Consensus 69 ~~lg~~~~~~ 78 (150)
T 4ga2_A 69 RFLGLLYELE 78 (150)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 9999988654
No 102
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.57 E-value=9.9e-08 Score=76.35 Aligned_cols=81 Identities=14% Similarity=0.079 Sum_probs=71.5
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..+...|..++..|+|.+|+..|.++++..+.. ..++.|+|.+++++++|.+|+..++++++++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~ 71 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEE---------------SKYWLMKGKALYNLERYEEAVDCYNYVINVIE 71 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc
Confidence 345678889999999999999999999984432 56789999999999999999999999999999
Q ss_pred C--Ccchhcccccccccc
Q 011003 480 Q--KGSGIHSDGRFRFGR 495 (496)
Q Consensus 480 ~--~~Ka~~rrg~a~~~l 495 (496)
+ +..+++.+|.++..+
T Consensus 72 ~~~~~~~~~~l~~~~~~~ 89 (112)
T 2kck_A 72 DEYNKDVWAAKADALRYI 89 (112)
T ss_dssp CTTCHHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHHHH
Confidence 9 999999999888764
No 103
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.56 E-value=7.1e-08 Score=79.95 Aligned_cols=78 Identities=29% Similarity=0.342 Sum_probs=43.9
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
...+...|+.++..|+|.+|+..|.++++..+.. ..++.++|.|++++++|.+|+..++++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~ 80 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD---------------AKLYSNRAACYTKLLEFQLALKDCEECIQLE 80 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC---------------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 4566777888888888888888888888763321 2334444444444444444444444444444
Q ss_pred CCCcchhcccccc
Q 011003 479 VQKGSGIHSDGRF 491 (496)
Q Consensus 479 p~~~Ka~~rrg~a 491 (496)
|++..+++.+|.+
T Consensus 81 ~~~~~~~~~la~~ 93 (133)
T 2lni_A 81 PTFIKGYTRKAAA 93 (133)
T ss_dssp TTCHHHHHHHHHH
T ss_pred CCchHHHHHHHHH
Confidence 4444444444433
No 104
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.54 E-value=1.2e-07 Score=74.93 Aligned_cols=70 Identities=13% Similarity=0.030 Sum_probs=62.6
Q ss_pred hHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHH-hhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVA-CNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 402 ~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
...+|..+++.|+|.+|+..|+++++..+.+ .. ++.|+|.||+++++|.+|+..++++++++|+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 67 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVG---------------KDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPD 67 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSST---------------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 3467899999999999999999999984332 55 8999999999999999999999999999999
Q ss_pred Ccchhc
Q 011003 481 KGSGIH 486 (496)
Q Consensus 481 ~~Ka~~ 486 (496)
+..+++
T Consensus 68 ~~~~~~ 73 (99)
T 2kc7_A 68 SPALQA 73 (99)
T ss_dssp STHHHH
T ss_pred cHHHHH
Confidence 999884
No 105
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.52 E-value=1.6e-07 Score=77.19 Aligned_cols=84 Identities=23% Similarity=0.211 Sum_probs=50.5
Q ss_pred HHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHH
Q 011003 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTK 473 (496)
Q Consensus 394 e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~ 473 (496)
.....+..+...|..++..++|..|+..|.++++..+.. ..++.++|.|+.++++|.+|+..+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~ 71 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN---------------AVYFCNRAAAYSKLGNYAGAVQDCER 71 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHhhchHHHHHHHHH
Confidence 344566777888888888888888888888888763321 33444444444445555555555555
Q ss_pred HhcccCCCcchhccccccc
Q 011003 474 KCESSVQKGSGIHSDGRFR 492 (496)
Q Consensus 474 al~~dp~~~Ka~~rrg~a~ 492 (496)
+++++|++..+++.+|.++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~ 90 (131)
T 2vyi_A 72 AICIDPAYSKAYGRMGLAL 90 (131)
T ss_dssp HHHHCTTCHHHHHHHHHHH
T ss_pred HHhcCccCHHHHHHHHHHH
Confidence 5444444444444444443
No 106
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.50 E-value=7.6e-08 Score=87.85 Aligned_cols=74 Identities=15% Similarity=0.109 Sum_probs=68.7
Q ss_pred hhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcch
Q 011003 405 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSG 484 (496)
Q Consensus 405 ~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka 484 (496)
.|..+++.|+|.+|+..|++++++-+. ...++.|+|.+++++|+|.+|+..++++|+++|++..+
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~---------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a 124 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPN---------------NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAA 124 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCC---------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Confidence 899999999999999999999998443 37889999999999999999999999999999999999
Q ss_pred hcccccccc
Q 011003 485 IHSDGRFRF 493 (496)
Q Consensus 485 ~~rrg~a~~ 493 (496)
|+.+|.+|+
T Consensus 125 ~~~lg~~~~ 133 (208)
T 3urz_A 125 NIFLGNYYY 133 (208)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
No 107
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.48 E-value=4.2e-08 Score=101.69 Aligned_cols=85 Identities=22% Similarity=0.178 Sum_probs=70.1
Q ss_pred HHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHh
Q 011003 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKC 475 (496)
Q Consensus 396 ~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 475 (496)
.+.+..+...|+.+++.|+|++|+..|++|+++.+. ...++.|+|.||+++++|.+|+.++++|+
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~---------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al 67 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS---------------NAIYYGNRSLAYLRTECYGYALGDATRAI 67 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc---------------cHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 356777888999999999999999999999987332 26778888888888888888888888888
Q ss_pred cccCCCcchhcccccccccc
Q 011003 476 ESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 476 ~~dp~~~Ka~~rrg~a~~~l 495 (496)
+++|++.++|+++|.+|..+
T Consensus 68 ~l~p~~~~~~~~lg~~~~~~ 87 (477)
T 1wao_1 68 ELDKKYIKGYYRRAASNMAL 87 (477)
T ss_dssp HSCTTCHHHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHc
Confidence 88888888888888877643
No 108
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.47 E-value=1.2e-07 Score=78.58 Aligned_cols=83 Identities=13% Similarity=0.136 Sum_probs=65.3
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..+++.|+|.+|+..|.++++..+.. .....++.++|.|++++++|.+|+..++++++.+|+
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~------------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~ 71 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNG------------VYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPT 71 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSS------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCC------------cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC
Confidence 45567888889999999999999988874432 122367788888888888888888888888888888
Q ss_pred C---cchhcccccccccc
Q 011003 481 K---GSGIHSDGRFRFGR 495 (496)
Q Consensus 481 ~---~Ka~~rrg~a~~~l 495 (496)
+ ..+++++|.++..+
T Consensus 72 ~~~~~~~~~~la~~~~~~ 89 (129)
T 2xev_A 72 HDKAAGGLLKLGLSQYGE 89 (129)
T ss_dssp STTHHHHHHHHHHHHHHT
T ss_pred CcccHHHHHHHHHHHHHc
Confidence 8 77788888877643
No 109
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.47 E-value=5e-08 Score=101.57 Aligned_cols=94 Identities=18% Similarity=0.202 Sum_probs=84.6
Q ss_pred ccccChHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHH
Q 011003 387 SWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQ 466 (496)
Q Consensus 387 ~~~~~~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~ 466 (496)
...++.+++.+.+..+...|+.+++.|+|.+|+..|+++++..+. ...++.|+|.||+++++|.+
T Consensus 13 ~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~---------------~~~~~~~la~~~~~~g~~~~ 77 (537)
T 3fp2_A 13 LKGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN---------------EPVFYSNISACYISTGDLEK 77 (537)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHHTCHHH
T ss_pred hcCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC---------------CcHHHHHHHHHHHHcCCHHH
Confidence 446788888999999999999999999999999999999998433 37889999999999999999
Q ss_pred HHHHHHHHhcccCCCcchhcccccccccc
Q 011003 467 AEKLCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 467 Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
|+..|+++++++|++..+++++|.++..+
T Consensus 78 A~~~~~~al~~~p~~~~~~~~la~~~~~~ 106 (537)
T 3fp2_A 78 VIEFTTKALEIKPDHSKALLRRASANESL 106 (537)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHc
Confidence 99999999999999999999999887653
No 110
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.46 E-value=1.7e-07 Score=86.20 Aligned_cols=81 Identities=20% Similarity=0.264 Sum_probs=69.5
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhc-cCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIE-YDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~-~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
..+...|..+++.|+|.+|+..|+++++..+ .+ ..++.|+|.|+.++++|.+|+..++++++++
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 72 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQD---------------SVTAYNCGVCADNIKKYKEAADYFDIAIKKN 72 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCC---------------cHHHHHHHHHHHHhhcHHHHHHHHHHHHHhC
Confidence 4677899999999999999999999999843 22 4677889999999999999999999999999
Q ss_pred CCCcchhcccccccccc
Q 011003 479 VQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 479 p~~~Ka~~rrg~a~~~l 495 (496)
|++..+|+.+|.+|..+
T Consensus 73 p~~~~~~~~l~~~~~~~ 89 (228)
T 4i17_A 73 YNLANAYIGKSAAYRDM 89 (228)
T ss_dssp CSHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHc
Confidence 99999999998887654
No 111
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.46 E-value=1.1e-07 Score=82.89 Aligned_cols=78 Identities=17% Similarity=0.091 Sum_probs=69.4
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..+...|..+++.|+|.+|+..|.+++++-+ ....+|.|+|.||+++++|.+|+.++.++|+++|
T Consensus 46 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 110 (164)
T 3sz7_A 46 IYLSNRAAAYSASGQHEKAAEDAELATVVDP---------------KYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEG 110 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---------------CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 3456788999999999999999999999843 3378899999999999999999999999999999
Q ss_pred CCcchhccccccc
Q 011003 480 QKGSGIHSDGRFR 492 (496)
Q Consensus 480 ~~~Ka~~rrg~a~ 492 (496)
++..+|++++.+.
T Consensus 111 ~~~~~~~~~~l~~ 123 (164)
T 3sz7_A 111 NGGSDAMKRGLET 123 (164)
T ss_dssp SSCCHHHHHHHHH
T ss_pred CchHHHHHHHHHH
Confidence 9999999887653
No 112
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.45 E-value=1.6e-07 Score=77.26 Aligned_cols=83 Identities=28% Similarity=0.366 Sum_probs=73.1
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.+..+...|..++..|+|.+|+..|.++++..+.. ..++.|+|.|++++++|.+|+..+++++++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 67 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN---------------MTYITNQAAVYFEKGDYNKCRELCEKAIEV 67 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 45677889999999999999999999999984332 678899999999999999999999999999
Q ss_pred cCCC-------cchhcccccccccc
Q 011003 478 SVQK-------GSGIHSDGRFRFGR 495 (496)
Q Consensus 478 dp~~-------~Ka~~rrg~a~~~l 495 (496)
+|++ ..+++++|.++..+
T Consensus 68 ~~~~~~~~~~~~~~~~~la~~~~~~ 92 (131)
T 1elr_A 68 GRENREDYRQIAKAYARIGNSYFKE 92 (131)
T ss_dssp HHHSTTCHHHHHHHHHHHHHHHHHT
T ss_pred ccccchhHHHHHHHHHHHHHHHHHh
Confidence 9987 88999999887653
No 113
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.45 E-value=1.1e-07 Score=84.29 Aligned_cols=75 Identities=15% Similarity=-0.015 Sum_probs=61.5
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..+++.|+|++|+..|+++++.-+ ....++.|+|.||.++|++.+|+.++++||+++|+
T Consensus 109 ~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p---------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 173 (184)
T 3vtx_A 109 AYYKLGLVYDSMGEHDKAIEAYEKTISIKP---------------GFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEK 173 (184)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHhcc---------------hhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCcc
Confidence 345678888899999999999999998733 33778999999999999999999999999999998
Q ss_pred Ccchhccccccc
Q 011003 481 KGSGIHSDGRFR 492 (496)
Q Consensus 481 ~~Ka~~rrg~a~ 492 (496)
+ +.|++|..+
T Consensus 174 ~--a~~~lali~ 183 (184)
T 3vtx_A 174 K--AKYELALVP 183 (184)
T ss_dssp H--HHHCSCCSC
T ss_pred C--HHHHHHhhC
Confidence 6 457766544
No 114
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.44 E-value=9.8e-08 Score=103.67 Aligned_cols=99 Identities=14% Similarity=0.072 Sum_probs=64.2
Q ss_pred HHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCC-----------CCh--H------HHHHHHHHHHHhhhHHHHH
Q 011003 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS-----------FGD--E------EKKQAKALKVACNLNNAAC 457 (496)
Q Consensus 397 ~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~-----------~~~--~------~~~~~~~~~~~~~~N~a~~ 457 (496)
..+..+...|+.+.++|+|++|+..|++|+++-+.... ..+ + ...++++....+|+|+|.+
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~ 86 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNT 86 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 34566777788888888888888888888876432200 000 0 0112233446677777777
Q ss_pred HHhccCHHHHHHHHHHHhcccCCCcchhcccccccccc
Q 011003 458 KLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 458 ~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
+.++++|++|++.+++||+++|++..||+.+|.+|..+
T Consensus 87 l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~ 124 (723)
T 4gyw_A 87 LKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDS 124 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 77777777777777777777777777777777766543
No 115
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.42 E-value=6.4e-08 Score=79.49 Aligned_cols=73 Identities=18% Similarity=0.084 Sum_probs=58.2
Q ss_pred hcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhccccc
Q 011003 411 KAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGR 490 (496)
Q Consensus 411 k~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~ 490 (496)
..|+|.+|+..|.+|+++-.. ++....++.|+|.||+++++|.+|+..++++++++|++..+++.+|.
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~------------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 69 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQ------------GKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAM 69 (117)
T ss_dssp -----CCCHHHHHHHHSSCCC------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCC------------CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 358899999999999986110 34557889999999999999999999999999999999999999998
Q ss_pred ccccc
Q 011003 491 FRFGR 495 (496)
Q Consensus 491 a~~~l 495 (496)
++..+
T Consensus 70 ~~~~~ 74 (117)
T 3k9i_A 70 VLYNL 74 (117)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 87653
No 116
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.40 E-value=1.5e-07 Score=97.17 Aligned_cols=85 Identities=26% Similarity=0.268 Sum_probs=77.6
Q ss_pred HHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHH
Q 011003 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKK 474 (496)
Q Consensus 395 ~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 474 (496)
+.+.+..+...|+.+++.|+|.+|+..|+++++..+ ...++.++|.|++++++|.+|+..|+++
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p----------------~~~~~~~la~~~~~~g~~~~A~~~~~~a 65 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE----------------DPVFYSNLSACYVSVGDLKKVVEMSTKA 65 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc----------------cHHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 567789999999999999999999999999999732 1578999999999999999999999999
Q ss_pred hcccCCCcchhcccccccccc
Q 011003 475 CESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 475 l~~dp~~~Ka~~rrg~a~~~l 495 (496)
++++|++..+|+++|.++..+
T Consensus 66 l~~~p~~~~~~~~l~~~~~~~ 86 (514)
T 2gw1_A 66 LELKPDYSKVLLRRASANEGL 86 (514)
T ss_dssp HHHCSCCHHHHHHHHHHHHHT
T ss_pred hccChHHHHHHHHHHHHHHHH
Confidence 999999999999999988654
No 117
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.39 E-value=6.9e-07 Score=71.90 Aligned_cols=81 Identities=15% Similarity=0.041 Sum_probs=67.0
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
..-+.|+.+|+.++|..|+..|.+|++........ ......++.++|.|+.++|++..|+...+++|+++|+
T Consensus 7 dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~--------~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~ 78 (104)
T 2v5f_A 7 DCFELGKVAYTEADYYHTELWMEQALRQLDEGEIS--------TIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPE 78 (104)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCC--------SSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCC--------cccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC
Confidence 34478999999999999999999999986432111 1123577899999999999999999999999999999
Q ss_pred Ccchhcccc
Q 011003 481 KGSGIHSDG 489 (496)
Q Consensus 481 ~~Ka~~rrg 489 (496)
+..++..++
T Consensus 79 ~~~~~~n~~ 87 (104)
T 2v5f_A 79 HQRANGNLK 87 (104)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHhhHH
Confidence 988876654
No 118
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.37 E-value=6.1e-08 Score=83.81 Aligned_cols=72 Identities=11% Similarity=0.036 Sum_probs=63.6
Q ss_pred hHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHH----------HHHHHHHHHhccc
Q 011003 409 LFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYK----------QAEKLCTKKCESS 478 (496)
Q Consensus 409 ~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~----------~Ai~~~~~al~~d 478 (496)
.-+.++|++|+..|.+|+++ ++.....|.|++.|++.+++++ +|+..+++||+++
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l---------------~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ld 76 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKS---------------NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID 76 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhHHHHHHHHHHHHHHH---------------CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhC
Confidence 33567899999999999998 4445889999999999998764 9999999999999
Q ss_pred CCCcchhcccccccccc
Q 011003 479 VQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 479 p~~~Ka~~rrg~a~~~l 495 (496)
|++..|||.+|.||..+
T Consensus 77 P~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 77 PKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp TTCHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHh
Confidence 99999999999998753
No 119
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.34 E-value=1.9e-07 Score=85.73 Aligned_cols=80 Identities=18% Similarity=0.074 Sum_probs=72.3
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..+...|..+++.|+|.+|+..|+++++.-+ ....++.|+|.++.++|++.+|+..++++++++|
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P 70 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKENP---------------QDPEALYWLARTQLKLGLVNPALENGKTLVARTP 70 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTSS---------------SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3456789999999999999999999999843 3378899999999999999999999999999999
Q ss_pred CCcchhccccccccc
Q 011003 480 QKGSGIHSDGRFRFG 494 (496)
Q Consensus 480 ~~~Ka~~rrg~a~~~ 494 (496)
++..+++.+|.++..
T Consensus 71 ~~~~a~~~lg~~~~~ 85 (217)
T 2pl2_A 71 RYLGGYMVLSEAYVA 85 (217)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHH
Confidence 999999999988764
No 120
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.33 E-value=1.7e-07 Score=94.24 Aligned_cols=93 Identities=8% Similarity=-0.096 Sum_probs=48.2
Q ss_pred hhHHhhhhhHhccc-HHHHHHHHHHHhhhhccC--------------CCCChH-----HHHHHHHHHHHhhhHHHHHHHh
Q 011003 401 KKKEQGNTLFKAGK-YARASKRYEKAVKYIEYD--------------TSFGDE-----EKKQAKALKVACNLNNAACKLK 460 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~-y~~A~~~Y~~al~~~~~~--------------~~~~~~-----~~~~~~~~~~~~~~N~a~~~~k 460 (496)
.+..+|..+++.|+ |.+|+..|.+|+++-+.. ....+. ...++++....+|.||+.|+.+
T Consensus 133 a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~ 212 (382)
T 2h6f_A 133 VWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQE 212 (382)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHH
Confidence 34556677777775 777777777777753221 000100 0112223334455555555555
Q ss_pred ccCHHHHHHHHHHHhcccCCCcchhcccccccc
Q 011003 461 LKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRF 493 (496)
Q Consensus 461 l~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~ 493 (496)
+++|.+|+.+++++|+++|+|..||+.+|.+|.
T Consensus 213 ~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~ 245 (382)
T 2h6f_A 213 FKLWDNELQYVDQLLKEDVRNNSVWNQRYFVIS 245 (382)
T ss_dssp HTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 555555555555555555555555555555543
No 121
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.32 E-value=2.1e-07 Score=80.51 Aligned_cols=78 Identities=13% Similarity=0.115 Sum_probs=65.7
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..+++.|+|.+|+..|.+|+++-+.+ ..+|.|+|.||+++|++.+|+..+++||+++
T Consensus 70 ~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~---------------~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 70 VDYIMGLAAIYQIKEQFQQAADLYAVAFALGKND---------------YTPVFHTGQCQLRLKAPLKAKECFELVIQHS 134 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSC---------------CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCC---------------cHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3345678999999999999999999999984433 6789999999999999999999999999999
Q ss_pred CCCcchhcccccccc
Q 011003 479 VQKGSGIHSDGRFRF 493 (496)
Q Consensus 479 p~~~Ka~~rrg~a~~ 493 (496)
|+.. +-.+|+.++
T Consensus 135 ~~~~--~~~~A~~ll 147 (151)
T 3gyz_A 135 NDEK--LKIKAQSYL 147 (151)
T ss_dssp CCHH--HHHHHHHHH
T ss_pred CCHH--HHHHHHHHH
Confidence 9864 555555544
No 122
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.32 E-value=2.6e-07 Score=92.82 Aligned_cols=96 Identities=10% Similarity=-0.043 Sum_probs=60.2
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCC-----------CCC---hH------HHHHHHHHHHHhhhHHHHH
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-----------SFG---DE------EKKQAKALKVACNLNNAAC 457 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~-----------~~~---~~------~~~~~~~~~~~~~~N~a~~ 457 (496)
.+..+...|..+++.|+|.+|+..|.+||++-+... ... ++ ...++++....+|.||+.+
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~ 175 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVL 175 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 355566788899999999999999999999743320 000 00 0112223334556666666
Q ss_pred HHhccCHHHHHHHHHHHhcccCCCcchhcccccccc
Q 011003 458 KLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRF 493 (496)
Q Consensus 458 ~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~ 493 (496)
+.++++|.+|+.+|++||+++|+|..||+.+|.++.
T Consensus 176 ~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~ 211 (382)
T 2h6f_A 176 VEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQ 211 (382)
T ss_dssp HHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHH
Confidence 666666666666666666666666666666665554
No 123
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.31 E-value=3.2e-07 Score=99.61 Aligned_cols=97 Identities=11% Similarity=-0.002 Sum_probs=72.2
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCC-----------CCh--H------HHHHHHHHHHHhhhHHHHHHHh
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS-----------FGD--E------EKKQAKALKVACNLNNAACKLK 460 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~-----------~~~--~------~~~~~~~~~~~~~~N~a~~~~k 460 (496)
..+...|+.+++.|+|++|+..|++|+++-+.... ..+ + ...++++....+|+|+|.+|.+
T Consensus 44 ~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~ 123 (723)
T 4gyw_A 44 AAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD 123 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 34456677777788888888888888776332100 000 0 1122344557889999999999
Q ss_pred ccCHHHHHHHHHHHhcccCCCcchhccccccccccC
Q 011003 461 LKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFGRV 496 (496)
Q Consensus 461 l~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l~ 496 (496)
+|++++|+..+++||+++|++..+|+.+|.+|..++
T Consensus 124 ~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g 159 (723)
T 4gyw_A 124 SGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVC 159 (723)
T ss_dssp TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcc
Confidence 999999999999999999999999999999887653
No 124
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.28 E-value=5.7e-07 Score=82.54 Aligned_cols=79 Identities=11% Similarity=-0.031 Sum_probs=68.5
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..++..|++.+|+..|++|+++- . ...++.|+|.++.++|++.+|+..++++++++|+
T Consensus 120 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~---------------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~ 183 (217)
T 2pl2_A 120 LHLQRGLVYALLGERDKAEASLKQALALE-D---------------TPEIRSALAELYLSMGRLDEALAQYAKALEQAPK 183 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-C---------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhcc-c---------------chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 34567888889999999999999999873 2 2677899999999999999999999999999999
Q ss_pred Ccchhcccccccccc
Q 011003 481 KGSGIHSDGRFRFGR 495 (496)
Q Consensus 481 ~~Ka~~rrg~a~~~l 495 (496)
+..+++.+|.++..+
T Consensus 184 ~~~~~~~la~~~~~~ 198 (217)
T 2pl2_A 184 DLDLRVRYASALLLK 198 (217)
T ss_dssp CHHHHHHHHHHHTC-
T ss_pred ChHHHHHHHHHHHHc
Confidence 999999999887654
No 125
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.27 E-value=4.3e-07 Score=80.41 Aligned_cols=79 Identities=14% Similarity=0.050 Sum_probs=54.2
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+.-+...|+.++++|+|++|+..|++|+++-+. ...++.++|.||.+++++.+|+..+.+++..+
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~---------------~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~ 69 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPN---------------NVETLLKLGKTYMDIGLPNDAIESLKKFVVLD 69 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 345667899999999999999999999998332 24555566666666666666666666666666
Q ss_pred CCCcchhccccccc
Q 011003 479 VQKGSGIHSDGRFR 492 (496)
Q Consensus 479 p~~~Ka~~rrg~a~ 492 (496)
|++..+++..|.++
T Consensus 70 ~~~~~~~~~~~~~~ 83 (184)
T 3vtx_A 70 TTSAEAYYILGSAN 83 (184)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHH
Confidence 66655555555433
No 126
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.27 E-value=8.9e-07 Score=73.12 Aligned_cols=80 Identities=15% Similarity=0.089 Sum_probs=70.4
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..+...|..++..++|.+|+..|.++++..+. ...++.|+|.|++++++|.+|+..++++++++|
T Consensus 51 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~---------------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p 115 (133)
T 2lni_A 51 KLYSNRAACYTKLLEFQLALKDCEECIQLEPT---------------FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDS 115 (133)
T ss_dssp HHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC---------------chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCC
Confidence 34566788889999999999999999997433 267899999999999999999999999999999
Q ss_pred CCcchhccccccccc
Q 011003 480 QKGSGIHSDGRFRFG 494 (496)
Q Consensus 480 ~~~Ka~~rrg~a~~~ 494 (496)
++..+++..+.++..
T Consensus 116 ~~~~~~~~l~~~~~~ 130 (133)
T 2lni_A 116 SCKEAADGYQRCMMA 130 (133)
T ss_dssp GGTHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHH
Confidence 999999999888764
No 127
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.26 E-value=1.1e-06 Score=76.01 Aligned_cols=77 Identities=14% Similarity=0.007 Sum_probs=64.1
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhh----hHHHHHHHhccCHHHHHHHHHHH
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACN----LNNAACKLKLKDYKQAEKLCTKK 474 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~----~N~a~~~~kl~~~~~Ai~~~~~a 474 (496)
+..+-.+|..+.+.|+|++|+..|.+||++++...+.++ ....+| +|++.|+.++++|.+|+.++++|
T Consensus 57 a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~p--------d~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kA 128 (159)
T 2hr2_A 57 AFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQ--------DEGKLWISAVYSRALALDGLGRGAEAMPEFKKV 128 (159)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTS--------THHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCC--------chHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHH
Confidence 447888999999999999999999999998544333322 235556 99999999999999999999999
Q ss_pred hcccCCCcc
Q 011003 475 CESSVQKGS 483 (496)
Q Consensus 475 l~~dp~~~K 483 (496)
|+++|++.-
T Consensus 129 lel~p~d~~ 137 (159)
T 2hr2_A 129 VEMIEERKG 137 (159)
T ss_dssp HHHHHHCCS
T ss_pred HhcCCCcHH
Confidence 999998753
No 128
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.26 E-value=4.5e-07 Score=75.04 Aligned_cols=79 Identities=13% Similarity=0.029 Sum_probs=68.4
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc-
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS- 478 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d- 478 (496)
..+...|..+++.|+|.+|+..|.+++++-+ ....++.|+|.|+.++++|.+|+.++.++++++
T Consensus 39 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p---------------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 103 (126)
T 3upv_A 39 RGYSNRAAALAKLMSFPEAIADCNKAIEKDP---------------NFVRAYIRKATAQIAVKEYASALETLDAARTKDA 103 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC---------------CcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCc
Confidence 4566789999999999999999999999833 337789999999999999999999999999999
Q ss_pred -----CCCcchhcccccccc
Q 011003 479 -----VQKGSGIHSDGRFRF 493 (496)
Q Consensus 479 -----p~~~Ka~~rrg~a~~ 493 (496)
|++..++...+++..
T Consensus 104 ~~~~~p~~~~~~~~l~~~~~ 123 (126)
T 3upv_A 104 EVNNGSSAREIDQLYYKASQ 123 (126)
T ss_dssp HHHTTTTHHHHHHHHHHHHH
T ss_pred ccCCchhHHHHHHHHHHHHH
Confidence 988887777666543
No 129
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.25 E-value=9.1e-07 Score=81.55 Aligned_cols=82 Identities=10% Similarity=0.056 Sum_probs=70.7
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..+...|..+++.|+|.+|+..|+++++..+.. +....++.++|.||+++++|.+|+..++++++++|
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~------------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P 72 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFG------------PYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNP 72 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------------hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCc
Confidence 456678999999999999999999999875432 22356789999999999999999999999999999
Q ss_pred CCcc---hhcccccccc
Q 011003 480 QKGS---GIHSDGRFRF 493 (496)
Q Consensus 480 ~~~K---a~~rrg~a~~ 493 (496)
++.. |+|++|.++.
T Consensus 73 ~~~~~~~a~~~~g~~~~ 89 (225)
T 2yhc_A 73 THPNIDYVMYMRGLTNM 89 (225)
T ss_dssp TCTTHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHH
Confidence 9987 8999998764
No 130
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.25 E-value=9.9e-07 Score=79.86 Aligned_cols=80 Identities=14% Similarity=0.089 Sum_probs=66.9
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.+..+...|+.++..|+|.+|+..|.+++.. ...++.|+|.||+++++|.+|+..+++++++
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~------------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 66 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQDP------------------HSRICFNIGCMYTILKNMTEAEKAFTRSINR 66 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSSSC------------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC------------------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3455678899999999999999999988521 1458889999999999999999999999999
Q ss_pred cCCCcchhcccccccccc
Q 011003 478 SVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 478 dp~~~Ka~~rrg~a~~~l 495 (496)
+|++..+|+.+|.++..+
T Consensus 67 ~~~~~~~~~~lg~~~~~~ 84 (213)
T 1hh8_A 67 DKHLAVAYFQRGMLYYQT 84 (213)
T ss_dssp CTTCHHHHHHHHHHHHHT
T ss_pred CccchHHHHHHHHHHHHc
Confidence 999999999998887653
No 131
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.22 E-value=9.1e-07 Score=80.11 Aligned_cols=81 Identities=7% Similarity=-0.058 Sum_probs=70.9
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..+...|..+++.|+|.+|+..|.+|++..+. ...++.|+|.||+++++|.+|+..+++++++.|
T Consensus 38 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~---------------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~ 102 (213)
T 1hh8_A 38 RICFNIGCMYTILKNMTEAEKAFTRSINRDKH---------------LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLR 102 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc---------------chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCC
Confidence 45677899999999999999999999998432 367899999999999999999999999999998
Q ss_pred CCc----------------chhcccccccccc
Q 011003 480 QKG----------------SGIHSDGRFRFGR 495 (496)
Q Consensus 480 ~~~----------------Ka~~rrg~a~~~l 495 (496)
++. .+++.+|.++..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 134 (213)
T 1hh8_A 103 GNQLIDYKILGLQFKLFACEVLYNIAFMYAKK 134 (213)
T ss_dssp TCSEEECGGGTBCCEEEHHHHHHHHHHHHHHT
T ss_pred CccHHHHHHhccccCccchHHHHHHHHHHHHc
Confidence 887 8889888877653
No 132
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.20 E-value=3.5e-06 Score=68.83 Aligned_cols=74 Identities=20% Similarity=0.156 Sum_probs=64.8
Q ss_pred HHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhc
Q 011003 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCE 476 (496)
Q Consensus 397 ~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 476 (496)
.....+...|..+++.|+|.+|+..|.++++..+.. ..++.|+|.|+.++|++.+|+..+.++|+
T Consensus 25 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 89 (117)
T 3k9i_A 25 DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH---------------QALRVFYAMVLYNLGRYEQGVELLLKIIA 89 (117)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345567788999999999999999999999984433 77899999999999999999999999999
Q ss_pred ccCCCcchh
Q 011003 477 SSVQKGSGI 485 (496)
Q Consensus 477 ~dp~~~Ka~ 485 (496)
++|++....
T Consensus 90 ~~p~~~~~~ 98 (117)
T 3k9i_A 90 ETSDDETIQ 98 (117)
T ss_dssp HHCCCHHHH
T ss_pred hCCCcHHHH
Confidence 999987643
No 133
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.19 E-value=6.7e-07 Score=71.22 Aligned_cols=70 Identities=14% Similarity=0.060 Sum_probs=60.5
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..+...|..+++.|+|.+|+..|++++++-+. ...+|.|+|.||.++++|.+|+..+++++++.|
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---------------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETDPD---------------YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhh
Confidence 44567899999999999999999999998433 366899999999999999999999999999987
Q ss_pred CCcch
Q 011003 480 QKGSG 484 (496)
Q Consensus 480 ~~~Ka 484 (496)
.+...
T Consensus 73 ~~~~~ 77 (100)
T 3ma5_A 73 EEGTQ 77 (100)
T ss_dssp HHSCH
T ss_pred cCCch
Confidence 65443
No 134
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.19 E-value=1.9e-06 Score=79.18 Aligned_cols=88 Identities=10% Similarity=0.060 Sum_probs=72.0
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
...+...|..+++.|+|.+|+..|+++++..+.. ..+......+|.|++.++.++++|.+|+..++++|+++
T Consensus 76 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 147 (228)
T 4i17_A 76 ANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGN--------ATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVT 147 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC--------HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc--------HHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcC
Confidence 3445667888888888888888888888874432 22344456789999999999999999999999999999
Q ss_pred CC--Ccchhccccccccc
Q 011003 479 VQ--KGSGIHSDGRFRFG 494 (496)
Q Consensus 479 p~--~~Ka~~rrg~a~~~ 494 (496)
|+ +..+|+.+|.+++.
T Consensus 148 p~~~~~~~~~~l~~~~~~ 165 (228)
T 4i17_A 148 SKKWKTDALYSLGVLFYN 165 (228)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHH
Confidence 99 99999999988754
No 135
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.18 E-value=9.5e-07 Score=75.91 Aligned_cols=70 Identities=16% Similarity=0.032 Sum_probs=61.4
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..+++.|+|.+|+..|.+|+++-+. ...++.|+|.||+.+|++.+|+..++++++++|+
T Consensus 57 ~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~---------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 121 (148)
T 2vgx_A 57 FFLGLGACRQAMGQYDLAIHSYSYGAVMDIX---------------EPRFPFHAAECLLQXGELAEAESGLFLAQELIAN 121 (148)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC---------------CchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC
Confidence 3456788899999999999999999998433 3678899999999999999999999999999999
Q ss_pred Ccchh
Q 011003 481 KGSGI 485 (496)
Q Consensus 481 ~~Ka~ 485 (496)
++...
T Consensus 122 ~~~~~ 126 (148)
T 2vgx_A 122 XPEFX 126 (148)
T ss_dssp CGGGH
T ss_pred CCcch
Confidence 87653
No 136
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.18 E-value=7.8e-07 Score=75.59 Aligned_cols=75 Identities=17% Similarity=0.105 Sum_probs=63.8
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..+++.|+|.+|+..|.+|+++-+. ...++.|+|.||+.+|+|.+|+..++++++++|+
T Consensus 54 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 118 (142)
T 2xcb_A 54 YFLGLGACRQSLGLYEQALQSYSYGALMDIN---------------EPRFPFHAAECHLQLGDLDGAESGFYSARALAAA 118 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC---------------CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 3456788899999999999999999998433 3677899999999999999999999999999999
Q ss_pred Ccchhccccc
Q 011003 481 KGSGIHSDGR 490 (496)
Q Consensus 481 ~~Ka~~rrg~ 490 (496)
++.....+.+
T Consensus 119 ~~~~~~~~~~ 128 (142)
T 2xcb_A 119 QPAHEALAAR 128 (142)
T ss_dssp CGGGHHHHHH
T ss_pred CcchHHHHHH
Confidence 8766554433
No 137
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.17 E-value=1.1e-06 Score=76.41 Aligned_cols=72 Identities=10% Similarity=0.033 Sum_probs=63.9
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.+..+...|..+++.|+|.+|+..|.+|+++ ++....+|.++|.||+.+++|.+|+.++.++|++
T Consensus 62 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~---------------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 62 NIPLYANMSQCYLNIGDLHEAEETSSEVLKR---------------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---------------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc---------------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 3456677899999999999999999999998 3334789999999999999999999999999999
Q ss_pred cCCCcch
Q 011003 478 SVQKGSG 484 (496)
Q Consensus 478 dp~~~Ka 484 (496)
+|+|..+
T Consensus 127 ~p~~~~~ 133 (162)
T 3rkv_A 127 HPAAASV 133 (162)
T ss_dssp CGGGHHH
T ss_pred CCCCHHH
Confidence 9998743
No 138
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.17 E-value=2.7e-06 Score=69.64 Aligned_cols=79 Identities=14% Similarity=-0.032 Sum_probs=69.5
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..++..|+|.+|+..|.++++..+.. ..++.++|.++.++++|.+|+..++++++++|+
T Consensus 48 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~ 112 (131)
T 2vyi_A 48 YFCNRAAAYSKLGNYAGAVQDCERAICIDPAY---------------SKAYGRMGLALSSLNKHVEAVAYYKKALELDPD 112 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHhcCccC---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCcc
Confidence 44567888899999999999999999973322 568899999999999999999999999999999
Q ss_pred Ccchhccccccccc
Q 011003 481 KGSGIHSDGRFRFG 494 (496)
Q Consensus 481 ~~Ka~~rrg~a~~~ 494 (496)
+..+++..|.++..
T Consensus 113 ~~~~~~~l~~~~~~ 126 (131)
T 2vyi_A 113 NETYKSNLKIAELK 126 (131)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH
Confidence 99999999888754
No 139
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.16 E-value=3.5e-06 Score=68.31 Aligned_cols=47 Identities=17% Similarity=0.114 Sum_probs=36.7
Q ss_pred HHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhccccccccc
Q 011003 448 VACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~ 494 (496)
..++.++|.++.+++++.+|+..++++++++|++..+++.+|.++..
T Consensus 77 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 77 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 45677888888888888888888888888888888888877776543
No 140
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.15 E-value=3.1e-06 Score=78.38 Aligned_cols=82 Identities=20% Similarity=0.212 Sum_probs=70.9
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..++..|+|.+|+..|.++++..+. ...++.++|.|++++++|.+|+..++++++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~---------------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 203 (258)
T 3uq3_A 139 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE---------------DARGYSNRAAALAKLMSFPEAIADCNKAIEKD 203 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc---------------cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 345567888899999999999999999987433 25789999999999999999999999999999
Q ss_pred CCCcchhcccccccccc
Q 011003 479 VQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 479 p~~~Ka~~rrg~a~~~l 495 (496)
|++..+|+.+|.++..+
T Consensus 204 ~~~~~~~~~l~~~~~~~ 220 (258)
T 3uq3_A 204 PNFVRAYIRKATAQIAV 220 (258)
T ss_dssp TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999887653
No 141
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.14 E-value=1.3e-06 Score=78.48 Aligned_cols=80 Identities=11% Similarity=-0.035 Sum_probs=70.6
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..+++.|+|.+|+..|.+++++.+. ...++.++|.||+++++|.+|+..+.++++++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~---------------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 152 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN---------------NVKALYKLGVANMYFGFLEEAKENLYKAASLN 152 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc---------------cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC
Confidence 456677899999999999999999999998332 36789999999999999999999999999999
Q ss_pred CCCcchhcccccccc
Q 011003 479 VQKGSGIHSDGRFRF 493 (496)
Q Consensus 479 p~~~Ka~~rrg~a~~ 493 (496)
|++..++...+.++.
T Consensus 153 p~~~~~~~~l~~~~~ 167 (198)
T 2fbn_A 153 PNNLDIRNSYELCVN 167 (198)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH
Confidence 999998888776654
No 142
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.14 E-value=4.5e-06 Score=66.96 Aligned_cols=77 Identities=13% Similarity=0.035 Sum_probs=67.5
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..++..|+|.+|+..|.++++..+. ...++.|+|.++.+++++.+|+..+.++++++|+
T Consensus 40 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 104 (118)
T 1elw_A 40 LYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD---------------WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEAN 104 (118)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhCcc---------------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCC
Confidence 4556788889999999999999999998433 2668899999999999999999999999999999
Q ss_pred Ccchhccccccc
Q 011003 481 KGSGIHSDGRFR 492 (496)
Q Consensus 481 ~~Ka~~rrg~a~ 492 (496)
+..+++..+.+.
T Consensus 105 ~~~~~~~l~~~~ 116 (118)
T 1elw_A 105 NPQLKEGLQNME 116 (118)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHhh
Confidence 999998877654
No 143
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.09 E-value=2.4e-06 Score=70.57 Aligned_cols=70 Identities=14% Similarity=-0.087 Sum_probs=55.5
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..++..|++.+|+..|.+|+++-+ ....++.|+|.||.++|++.+|+..++++|+++
T Consensus 51 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P---------------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 51 EEAWRSLGLTQAENEKDGLAIIALNHARMLDP---------------KDIAVHAALAVSHTNEHNANAALASLRAWLLSQ 115 (121)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 33455688889999999999999999999843 336789999999999999999999999999999
Q ss_pred CCCcc
Q 011003 479 VQKGS 483 (496)
Q Consensus 479 p~~~K 483 (496)
|++.+
T Consensus 116 P~~~~ 120 (121)
T 1hxi_A 116 PQYEQ 120 (121)
T ss_dssp -----
T ss_pred cCCCC
Confidence 98765
No 144
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.08 E-value=2.4e-06 Score=75.14 Aligned_cols=80 Identities=10% Similarity=0.019 Sum_probs=62.4
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHH-HHhccCH--HHHHHHHHHHhc
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAAC-KLKLKDY--KQAEKLCTKKCE 476 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~-~~kl~~~--~~Ai~~~~~al~ 476 (496)
..+...|..++..|+|.+|+..|.+++++.+.. ..++.++|.+ +++.+++ .+|+..++++++
T Consensus 45 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~ 109 (177)
T 2e2e_A 45 EQWALLGEYYLWQNDYSNSLLAYRQALQLRGEN---------------AELYAALATVLYYQASQHMTAQTRAMIDKALA 109 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSC---------------HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 456678889999999999999999999984332 5567777777 7777777 788888888888
Q ss_pred ccCCCcchhccccccccc
Q 011003 477 SSVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 477 ~dp~~~Ka~~rrg~a~~~ 494 (496)
++|++..+++.+|.++..
T Consensus 110 ~~p~~~~~~~~la~~~~~ 127 (177)
T 2e2e_A 110 LDSNEITALMLLASDAFM 127 (177)
T ss_dssp HCTTCHHHHHHHHHHHHH
T ss_pred hCCCcHHHHHHHHHHHHH
Confidence 888777777777766653
No 145
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.08 E-value=3.1e-06 Score=79.59 Aligned_cols=84 Identities=13% Similarity=0.126 Sum_probs=72.1
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..+++.|+|.+|+..|.++++..+.. +....++.++|.||+++++|.+|+..++++++++
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~------------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 82 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTH------------EWAADAQFYLARAYYQNKEYLLAASEYERFIQIY 82 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCS------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------------cchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC
Confidence 4567789999999999999999999999975432 2336789999999999999999999999999998
Q ss_pred CCC---cchhccccccccc
Q 011003 479 VQK---GSGIHSDGRFRFG 494 (496)
Q Consensus 479 p~~---~Ka~~rrg~a~~~ 494 (496)
|++ ..++|++|.+++.
T Consensus 83 p~~~~~~~a~~~lg~~~~~ 101 (261)
T 3qky_A 83 QIDPRVPQAEYERAMCYYK 101 (261)
T ss_dssp TTCTTHHHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHH
Confidence 865 5689999988754
No 146
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.08 E-value=5.3e-06 Score=67.22 Aligned_cols=81 Identities=22% Similarity=0.247 Sum_probs=70.7
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..++..|+|.+|+..|.++++..+.. ..++.++|.++.++++|.+|+..++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 73 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 3456678889999999999999999999874322 5678899999999999999999999999999
Q ss_pred CCCcchhccccccccc
Q 011003 479 VQKGSGIHSDGRFRFG 494 (496)
Q Consensus 479 p~~~Ka~~rrg~a~~~ 494 (496)
|++..+++..|.++..
T Consensus 74 ~~~~~~~~~la~~~~~ 89 (125)
T 1na0_A 74 PNNAEAWYNLGNAYYK 89 (125)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHH
Confidence 9999999998887754
No 147
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.08 E-value=1.7e-06 Score=74.68 Aligned_cols=74 Identities=11% Similarity=0.153 Sum_probs=60.6
Q ss_pred HhhhHHhhhhhHhcccH----------HHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhcc------
Q 011003 399 AGKKKEQGNTLFKAGKY----------ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK------ 462 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y----------~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~------ 462 (496)
+..+...|+.+...+++ ++|+..|++||++ ++....+|.|++.+|.+++
T Consensus 36 aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l---------------dP~~~~A~~~LG~ay~~lg~l~P~~ 100 (158)
T 1zu2_A 36 ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI---------------DPKKDEAVWCIGNAYTSFAFLTPDE 100 (158)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh---------------CcCcHHHHHHHHHHHHHhcccCcch
Confidence 44556677777777665 5999999999998 5555889999999999985
Q ss_pred -----CHHHHHHHHHHHhcccCCCcchhcccc
Q 011003 463 -----DYKQAEKLCTKKCESSVQKGSGIHSDG 489 (496)
Q Consensus 463 -----~~~~Ai~~~~~al~~dp~~~Ka~~rrg 489 (496)
+|.+|+.++++||+++|+|. .|+++
T Consensus 101 ~~a~g~~~eA~~~~~kAl~l~P~~~--~y~~a 130 (158)
T 1zu2_A 101 TEAKHNFDLATQFFQQAVDEQPDNT--HYLKS 130 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCH--HHHHH
T ss_pred hhhhccHHHHHHHHHHHHHhCCCCH--HHHHH
Confidence 89999999999999999985 44444
No 148
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.07 E-value=5.8e-06 Score=77.52 Aligned_cols=83 Identities=12% Similarity=-0.064 Sum_probs=70.8
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.+..+...|..++..|+|.+|+..|.++++..+.. ..++.++|.+|.++++|.+|+..+++++++
T Consensus 42 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 106 (275)
T 1xnf_A 42 RAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM---------------PEVFNYLGIYLTQAGNFDAAYEAFDSVLEL 106 (275)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 35566678999999999999999999999984332 667889999999999999999999999999
Q ss_pred cCCCcchhcccccccccc
Q 011003 478 SVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 478 dp~~~Ka~~rrg~a~~~l 495 (496)
+|++..+|+.+|.++..+
T Consensus 107 ~~~~~~~~~~la~~~~~~ 124 (275)
T 1xnf_A 107 DPTYNYAHLNRGIALYYG 124 (275)
T ss_dssp CTTCTHHHHHHHHHHHHT
T ss_pred CccccHHHHHHHHHHHHh
Confidence 999999999988887643
No 149
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.06 E-value=1.4e-05 Score=66.56 Aligned_cols=74 Identities=15% Similarity=0.060 Sum_probs=61.8
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..+++.|+|.+|+..|.+|+++.+.... .......+|.|++.|+.++++|.+|++.+.++|+.+
T Consensus 42 ~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~--------~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~ 113 (127)
T 4gcn_A 42 ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRA--------DYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEF 113 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccch--------hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 345667899999999999999999999998543211 134557789999999999999999999999999988
Q ss_pred CC
Q 011003 479 VQ 480 (496)
Q Consensus 479 p~ 480 (496)
|+
T Consensus 114 ~~ 115 (127)
T 4gcn_A 114 RD 115 (127)
T ss_dssp CC
T ss_pred cC
Confidence 75
No 150
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.05 E-value=2.4e-06 Score=85.41 Aligned_cols=80 Identities=15% Similarity=0.002 Sum_probs=69.3
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..+++.++|.+|+..|++|+++-+ ....+|.|+|.||+++++|.+|+.++++|++++
T Consensus 273 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~ 337 (370)
T 1ihg_A 273 LSCVLNIGACKLKMSDWQGAVDSCLEALEIDP---------------SNTKALYRRAQGWQGLKEYDQALADLKKAQEIA 337 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHhCc---------------hhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 34455688889999999999999999999733 337889999999999999999999999999999
Q ss_pred CCCcchhcccccccc
Q 011003 479 VQKGSGIHSDGRFRF 493 (496)
Q Consensus 479 p~~~Ka~~rrg~a~~ 493 (496)
|++..++...+.++.
T Consensus 338 P~~~~~~~~l~~~~~ 352 (370)
T 1ihg_A 338 PEDKAIQAELLKVKQ 352 (370)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 999988887776653
No 151
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.05 E-value=4.4e-06 Score=80.19 Aligned_cols=89 Identities=16% Similarity=0.098 Sum_probs=73.0
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|+.++..|+|.+|+..|.+|++.+..... .......++.|+|.+|.++++|.+|+..+++||++.
T Consensus 155 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~--------~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~ 226 (293)
T 3u3w_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD--------NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSC--------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccc--------chhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 445677899999999999999999999987643211 145668899999999999999999999999999987
Q ss_pred CCC------cchhcccccccccc
Q 011003 479 VQK------GSGIHSDGRFRFGR 495 (496)
Q Consensus 479 p~~------~Ka~~rrg~a~~~l 495 (496)
+.+ ..+|+.+|.++..+
T Consensus 227 ~~~~~~~~~~~~~~~lg~~~~~~ 249 (293)
T 3u3w_A 227 CRINSMALIGQLYYQRGECLRKL 249 (293)
T ss_dssp HHTTBCTTHHHHHHHHHHHHHHT
T ss_pred HHcCcHHHHHHHHHHHHHHHHHh
Confidence 654 67888888877654
No 152
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.04 E-value=3.3e-06 Score=78.17 Aligned_cols=83 Identities=23% Similarity=0.283 Sum_probs=73.6
Q ss_pred HHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhc
Q 011003 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCE 476 (496)
Q Consensus 397 ~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 476 (496)
..+..+...|+.++..|+|.+|+..|.++++.. .. ..++.++|.|+.++++|.+|+..++++++
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 66 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWELH-KD---------------ITYLNNRAAAEYEKGEYETAISTLNDAVE 66 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CC---------------THHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-cc---------------HHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 357788999999999999999999999999984 22 56899999999999999999999999999
Q ss_pred ccCCC-------cchhcccccccccc
Q 011003 477 SSVQK-------GSGIHSDGRFRFGR 495 (496)
Q Consensus 477 ~dp~~-------~Ka~~rrg~a~~~l 495 (496)
++|++ ..+|+.+|.++..+
T Consensus 67 ~~~~~~~~~~~~~~~~~~l~~~~~~~ 92 (258)
T 3uq3_A 67 QGREMRADYKVISKSFARIGNAYHKL 92 (258)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred hCcccccchHHHHHHHHHHHHHHHHc
Confidence 99987 68999988887643
No 153
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.03 E-value=1e-05 Score=67.97 Aligned_cols=79 Identities=15% Similarity=0.028 Sum_probs=68.2
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
...+...|..++..++|.+|+..|.++++..+.. ..++.|+|.|+.++++|.+|+..+.++++++
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 129 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD---------------VKALYRRSQALEKLGRLDQAVLDLQRCVSLE 129 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 4556677888999999999999999999984332 6788999999999999999999999999999
Q ss_pred CCCcchhccccccc
Q 011003 479 VQKGSGIHSDGRFR 492 (496)
Q Consensus 479 p~~~Ka~~rrg~a~ 492 (496)
|++..++...+++.
T Consensus 130 p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 130 PKNKVFQEALRNIS 143 (148)
T ss_dssp SSCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 99998887766554
No 154
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.02 E-value=2.7e-06 Score=82.82 Aligned_cols=81 Identities=21% Similarity=0.141 Sum_probs=71.6
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|+.++..|+|.+|+..|.++++..+. ...++.++|.|++.+++|.+|+..++++++++
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~---------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 67 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPD---------------NYIAYYRRATVFLAMGKSKAALPDLTKVIALK 67 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc---------------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 456778999999999999999999999997433 25789999999999999999999999999999
Q ss_pred CCCcchhccccccccc
Q 011003 479 VQKGSGIHSDGRFRFG 494 (496)
Q Consensus 479 p~~~Ka~~rrg~a~~~ 494 (496)
|++..+++.+|.++..
T Consensus 68 ~~~~~~~~~l~~~~~~ 83 (359)
T 3ieg_A 68 MDFTAARLQRGHLLLK 83 (359)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHH
Confidence 9999999999887754
No 155
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.99 E-value=2.9e-06 Score=91.90 Aligned_cols=79 Identities=14% Similarity=0.054 Sum_probs=63.4
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..+++.|+|++|+..|+++++.-+ ....+|.|+|.+|+++++|.+|+.++++||+++|+
T Consensus 435 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 499 (681)
T 2pzi_A 435 LPLMEVRALLDLGDVAKATRKLDDLAERVG---------------WRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG 499 (681)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHC---------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhccCc---------------chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 345678888999999999999999999843 33667888888888888888888888888888888
Q ss_pred Ccchhccccccccc
Q 011003 481 KGSGIHSDGRFRFG 494 (496)
Q Consensus 481 ~~Ka~~rrg~a~~~ 494 (496)
+..+|+.+|.++..
T Consensus 500 ~~~~~~~lg~~~~~ 513 (681)
T 2pzi_A 500 ELAPKLALAATAEL 513 (681)
T ss_dssp CSHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHH
Confidence 88888887777654
No 156
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.99 E-value=1.3e-05 Score=77.95 Aligned_cols=83 Identities=17% Similarity=0.228 Sum_probs=62.7
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.....|+.+++.|+|.+|+..|.++++..+.. ......++.++|.|+.+++++.+|+..++++++++|+
T Consensus 236 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 304 (359)
T 3ieg_A 236 KLIESAEELIRDGRYTDATSKYESVMKTEPSV-----------AEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPD 304 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSS-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc-----------hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 34456888999999999999999999875443 3344556777777777888888888888888777777
Q ss_pred Ccchhccccccccc
Q 011003 481 KGSGIHSDGRFRFG 494 (496)
Q Consensus 481 ~~Ka~~rrg~a~~~ 494 (496)
+..+|+.+|.++..
T Consensus 305 ~~~~~~~~~~~~~~ 318 (359)
T 3ieg_A 305 NVNALKDRAEAYLI 318 (359)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 77777777776654
No 157
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.98 E-value=6.4e-06 Score=81.17 Aligned_cols=81 Identities=10% Similarity=-0.111 Sum_probs=69.0
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..+...|..+++.|+|.+|+..|+++++..+. ...++.+++.+|.++++|.+|+..++++++++|
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~---------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 130 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQDPG---------------DAEAWQFLGITQAENENEQAAIVALQRCLELQP 130 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC---------------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 44667889999999999999999999987433 266788999999999999999999999999999
Q ss_pred CCcchhcccccccccc
Q 011003 480 QKGSGIHSDGRFRFGR 495 (496)
Q Consensus 480 ~~~Ka~~rrg~a~~~l 495 (496)
++..+|+.+|.+|..+
T Consensus 131 ~~~~~~~~l~~~~~~~ 146 (365)
T 4eqf_A 131 NNLKALMALAVSYTNT 146 (365)
T ss_dssp TCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHcc
Confidence 9999999888877543
No 158
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.96 E-value=7.1e-06 Score=78.95 Aligned_cols=47 Identities=11% Similarity=0.070 Sum_probs=43.7
Q ss_pred HHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhccccccccc
Q 011003 448 VACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~ 494 (496)
..+++|+|.|++++|+|.+|+..++++|+++|+|+.+|+.+|.++..
T Consensus 200 ~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~ 246 (291)
T 3mkr_A 200 LLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQH 246 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999877654
No 159
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.92 E-value=1.7e-05 Score=80.31 Aligned_cols=83 Identities=17% Similarity=0.221 Sum_probs=61.8
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.....|+.+++.|+|.+|+..|.++++..+.. ......++.++|.++.+++++.+|+..|+++++++|+
T Consensus 259 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~ 327 (450)
T 2y4t_A 259 KLIESAEELIRDGRYTDATSKYESVMKTEPSI-----------AEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPD 327 (450)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSS-----------HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcc-----------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc
Confidence 34556999999999999999999999875432 2333556777777777777777777777777777777
Q ss_pred Ccchhccccccccc
Q 011003 481 KGSGIHSDGRFRFG 494 (496)
Q Consensus 481 ~~Ka~~rrg~a~~~ 494 (496)
+..+|+.+|.++..
T Consensus 328 ~~~~~~~l~~~~~~ 341 (450)
T 2y4t_A 328 NVNALKDRAEAYLI 341 (450)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 77777777766653
No 160
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.91 E-value=1.2e-05 Score=81.56 Aligned_cols=88 Identities=14% Similarity=0.093 Sum_probs=73.2
Q ss_pred CCCCCCEEEEEEEEEEcCCCEEEeecCCCccEEEEeCCCcccHHHHHHHccCcCCcEEEEEecCCcccCCCCCCCCCCCC
Q 011003 52 TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPN 131 (496)
Q Consensus 52 ~~~~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~G~~~~~~gle~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~~ 131 (496)
.++.||.|.++|+++ .||..|+++.. .++.+.+|.++ + |+++|.||++|+.+.|.+.. +|
T Consensus 154 ~a~~gD~V~id~~~~-~dG~~~~~~~~--~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF--------------aG 213 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY-NEEGKKLTSRE--YEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY--------------EG 213 (433)
T ss_dssp CCCTTSEEEEEEEEE-CTTSCEEEEEE--EEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE--------------TT
T ss_pred ccCCCCEEEEEEEEE-ECCEECcCCCC--CCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee--------------CC
Confidence 578999999999998 59999998764 68888999887 4 99999999999999999843 35
Q ss_pred CceEEEEEEEEEeecceeccCccceeEe
Q 011003 132 ATLQFDVELLSWTSVKDICKDGGIIKKI 159 (496)
Q Consensus 132 ~~l~~~v~l~~~~~~~~~~~d~~~~k~i 159 (496)
.+..|.|++.++........|..+.+.+
T Consensus 214 k~a~F~VtV~~Ik~~~lPEldDEfak~~ 241 (433)
T 3gty_X 214 KKYTYKLEVEEVYKRTLPEIGDELAKSV 241 (433)
T ss_dssp EEEEEEEEEEEEEEECCCCSSHHHHHTT
T ss_pred CeEEEEEEEEEEEEecCCcccHHHHHHh
Confidence 7999999999998766666666666543
No 161
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.90 E-value=2.1e-06 Score=92.93 Aligned_cols=94 Identities=9% Similarity=-0.000 Sum_probs=73.8
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCC--------------CCC-h---HHHHHHHHHHHHhhhHHHHHHHhcc
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT--------------SFG-D---EEKKQAKALKVACNLNNAACKLKLK 462 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~--------------~~~-~---~~~~~~~~~~~~~~~N~a~~~~kl~ 462 (496)
.+...|..+++.|+|++|+..|++|+++-+... ... . +...++++....++.|+|.+++++|
T Consensus 469 a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~~~~~~~al~~~P~~~~a~~~lg~~~~~~g 548 (681)
T 2pzi_A 469 LVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDEHKFYQTVWSTNDGVISAAFGLARARSAEG 548 (681)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCTTCHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHHHHHHHHHHHhCCchHHHHHHHHHHHHHcC
Confidence 445688889999999999999999998743211 011 1 1112344555778999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCcchhccccccccc
Q 011003 463 DYKQAEKLCTKKCESSVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 463 ~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~ 494 (496)
++++|+.++++|++++|++..|++.+|.+++.
T Consensus 549 ~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~ 580 (681)
T 2pzi_A 549 DRVGAVRTLDEVPPTSRHFTTARLTSAVTLLS 580 (681)
T ss_dssp CHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-
T ss_pred CHHHHHHHHHhhcccCcccHHHHHHHHHHHHc
Confidence 99999999999999999999999999998764
No 162
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.89 E-value=4.5e-06 Score=88.12 Aligned_cols=95 Identities=7% Similarity=-0.102 Sum_probs=52.5
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCC-----------CCh--H------HHHHHHHHHHHhhhHHHHHHHh
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS-----------FGD--E------EKKQAKALKVACNLNNAACKLK 460 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~-----------~~~--~------~~~~~~~~~~~~~~N~a~~~~k 460 (496)
..+...|..+++.|+|++|+..|++|+++.+.... ..+ + ...++.+....++.|+|.||.+
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 103 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALED 103 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 34556677777777777777777777775322100 000 0 0001112224556666666666
Q ss_pred ccCHHHHHHHHHHHhcccCCCcchhccccccccc
Q 011003 461 LKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 461 l~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~ 494 (496)
++++.+|+..++++++++|++..+++.+|.++..
T Consensus 104 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 137 (568)
T 2vsy_A 104 AGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRR 137 (568)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 6666666666666666666666666666655543
No 163
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.89 E-value=2.2e-05 Score=67.40 Aligned_cols=75 Identities=9% Similarity=0.051 Sum_probs=64.4
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..++..|+|.+|+..|.++++..+. ...++.|+|.|+.++++|.+|+..+.++++++|+
T Consensus 49 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~---------------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~ 113 (166)
T 1a17_A 49 YYGNRSLAYLRTECYGYALGDATRAIELDKK---------------YIKGYYRRAASNMALGKFRAALRDYETVVKVKPH 113 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc---------------cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 3456788889999999999999999998433 2668999999999999999999999999999999
Q ss_pred Ccchhccccc
Q 011003 481 KGSGIHSDGR 490 (496)
Q Consensus 481 ~~Ka~~rrg~ 490 (496)
+..++...+.
T Consensus 114 ~~~~~~~~~~ 123 (166)
T 1a17_A 114 DKDAKMKYQE 123 (166)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9888744443
No 164
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.89 E-value=2.5e-05 Score=74.98 Aligned_cols=87 Identities=28% Similarity=0.263 Sum_probs=69.0
Q ss_pred HhhhHHhhhhhHhc-ccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 399 AGKKKEQGNTLFKA-GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 399 a~~~k~~Gn~~fk~-~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
+..+...|..+... |+|.+|+..|++|+++.+.... ......++.|++.++.++++|.+|+..+++++++
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~---------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 187 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS---------VALSNKCFIKCADLKALDGQYIEASDIYSKLIKS 187 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCC---------hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 44566778888886 9999999999999998543210 2233678999999999999999999999999999
Q ss_pred cCCCcc-------hhccccccccc
Q 011003 478 SVQKGS-------GIHSDGRFRFG 494 (496)
Q Consensus 478 dp~~~K-------a~~rrg~a~~~ 494 (496)
+|++.. +|+++|.+++.
T Consensus 188 ~~~~~~~~~~~~~~~~~lg~~~~~ 211 (292)
T 1qqe_A 188 SMGNRLSQWSLKDYFLKKGLCQLA 211 (292)
T ss_dssp TSSCTTTGGGHHHHHHHHHHHHHH
T ss_pred HhcCCcccHHHHHHHHHHHHHHHH
Confidence 998754 46777776654
No 165
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.89 E-value=9.3e-06 Score=65.85 Aligned_cols=64 Identities=8% Similarity=-0.017 Sum_probs=55.7
Q ss_pred HHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhcccccccccc
Q 011003 417 RASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 417 ~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
.|+..|.++++.-+.+ ..++.|+|.+|+++++|.+|+..++++++++|++..+|+.+|.++..+
T Consensus 3 ~a~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 66 (115)
T 2kat_A 3 AITERLEAMLAQGTDN---------------MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQ 66 (115)
T ss_dssp CHHHHHHHHHTTTCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHc
Confidence 5788899999874433 678999999999999999999999999999999999999999887643
No 166
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.88 E-value=1.3e-05 Score=78.88 Aligned_cols=80 Identities=13% Similarity=-0.022 Sum_probs=69.6
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..+++.|+|.+|+..|+++++..+. ...++.|++.+|.++++|.+|+..++++++++|+
T Consensus 215 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 279 (365)
T 4eqf_A 215 LQTGLGVLFHLSGEFNRAIDAFNAALTVRPE---------------DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPG 279 (365)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC---------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 4456788888999999999999999987433 2668999999999999999999999999999999
Q ss_pred Ccchhcccccccccc
Q 011003 481 KGSGIHSDGRFRFGR 495 (496)
Q Consensus 481 ~~Ka~~rrg~a~~~l 495 (496)
+..+|+.+|.+|..+
T Consensus 280 ~~~~~~~l~~~~~~~ 294 (365)
T 4eqf_A 280 FIRSRYNLGISCINL 294 (365)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHC
Confidence 999999999887643
No 167
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.88 E-value=1.7e-05 Score=80.36 Aligned_cols=84 Identities=20% Similarity=0.147 Sum_probs=72.4
Q ss_pred HHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhc
Q 011003 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCE 476 (496)
Q Consensus 397 ~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 476 (496)
..+..+...|+.+++.|+|.+|+..|+++++..+. ...++.++|.|++++++|.+|+..++++++
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~---------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 88 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD---------------NYIAYYRRATVFLAMGKSKAALPDLTKVIQ 88 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc---------------cHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 45677888999999999999999999999987332 277888999999999999999999999999
Q ss_pred ccCCCcchhcccccccccc
Q 011003 477 SSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 477 ~dp~~~Ka~~rrg~a~~~l 495 (496)
++|++..+++.+|.+|..+
T Consensus 89 ~~p~~~~~~~~l~~~~~~~ 107 (450)
T 2y4t_A 89 LKMDFTAARLQRGHLLLKQ 107 (450)
T ss_dssp HCTTCHHHHHHHHHHHHHT
T ss_pred cCCCcHHHHHHHHHHHHHc
Confidence 9999999999888877643
No 168
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.88 E-value=1.7e-05 Score=64.86 Aligned_cols=83 Identities=14% Similarity=0.109 Sum_probs=66.2
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..++..|+|.+|+..|.++++..+..... ......++.|+|.++.++++|.+|+..++++++++|
T Consensus 40 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~- 110 (131)
T 1elr_A 40 YITNQAAVYFEKGDYNKCRELCEKAIEVGRENRED--------YRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR- 110 (131)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhccccchh--------HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-
Confidence 34567888999999999999999999984332110 223377899999999999999999999999999998
Q ss_pred Ccchhccccccc
Q 011003 481 KGSGIHSDGRFR 492 (496)
Q Consensus 481 ~~Ka~~rrg~a~ 492 (496)
+..++...+.++
T Consensus 111 ~~~~~~~l~~~~ 122 (131)
T 1elr_A 111 TPDVLKKCQQAE 122 (131)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 677776666544
No 169
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.87 E-value=6.1e-06 Score=77.38 Aligned_cols=76 Identities=14% Similarity=0.117 Sum_probs=54.2
Q ss_pred hHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCC
Q 011003 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQK 481 (496)
Q Consensus 402 ~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~ 481 (496)
+...|..++..|+|.+|+..|.++++..+. ...++.++|.||.++++|.+|+..++++++++|++
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~---------------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 141 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDRDTT---------------RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTD 141 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------------CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCC
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCcc---------------cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCc
Confidence 455677777777777777777777776322 24567777777777777777777777777777777
Q ss_pred cchhcccc-ccc
Q 011003 482 GSGIHSDG-RFR 492 (496)
Q Consensus 482 ~Ka~~rrg-~a~ 492 (496)
..+|+.+| .++
T Consensus 142 ~~~~~~l~~~~~ 153 (272)
T 3u4t_A 142 PKVFYELGQAYY 153 (272)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 77777777 444
No 170
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.86 E-value=2.6e-05 Score=70.31 Aligned_cols=79 Identities=16% Similarity=0.088 Sum_probs=43.0
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..++..|++.+|+..|.++++..+.. ..++.++|.++..++++.+|+..++++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 72 (225)
T 2vq2_A 8 SNIKTQLAMEYMRGQDYRQATASIEDALKSDPKN---------------ELAWLVRAEIYQYLKVNDKAQESFRQALSIK 72 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccc---------------hHHHHHHHHHHHHcCChHHHHHHHHHHHHhC
Confidence 3445556667777777777777777777653221 2344445555555555555555555555555
Q ss_pred CCCcchhccccccc
Q 011003 479 VQKGSGIHSDGRFR 492 (496)
Q Consensus 479 p~~~Ka~~rrg~a~ 492 (496)
|++..+++.+|.++
T Consensus 73 ~~~~~~~~~l~~~~ 86 (225)
T 2vq2_A 73 PDSAEINNNYGWFL 86 (225)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHH
Confidence 55444444444443
No 171
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.86 E-value=1.5e-05 Score=65.52 Aligned_cols=74 Identities=7% Similarity=0.008 Sum_probs=62.4
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..+++.|+|.+|+..|.++++..+.. .....++.++|.|+.+++++.+|+..++++++.+|+
T Consensus 41 ~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~------------~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~ 108 (129)
T 2xev_A 41 ALYWLGESYYATRNFQLAEAQFRDLVSRYPTH------------DKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPG 108 (129)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHCCCC------------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 45567888999999999999999999974432 123567899999999999999999999999999999
Q ss_pred Ccchhc
Q 011003 481 KGSGIH 486 (496)
Q Consensus 481 ~~Ka~~ 486 (496)
+..+..
T Consensus 109 ~~~~~~ 114 (129)
T 2xev_A 109 SDAARV 114 (129)
T ss_dssp SHHHHH
T ss_pred ChHHHH
Confidence 876544
No 172
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.85 E-value=2.8e-05 Score=63.56 Aligned_cols=77 Identities=22% Similarity=0.259 Sum_probs=61.7
Q ss_pred HHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCc
Q 011003 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKG 482 (496)
Q Consensus 403 k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~ 482 (496)
...|..++..|++.+|+..|.++++..+. ...++.++|.++.++++|.+|+..++++++.+|++.
T Consensus 39 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---------------~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 103 (136)
T 2fo7_A 39 YNLGNAYYKQGDYDEAIEYYQKALELDPR---------------SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA 103 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHCCC---------------chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh
Confidence 34566677778888888888888776322 245688999999999999999999999999999999
Q ss_pred chhccccccccc
Q 011003 483 SGIHSDGRFRFG 494 (496)
Q Consensus 483 Ka~~rrg~a~~~ 494 (496)
.+++..|.++..
T Consensus 104 ~~~~~la~~~~~ 115 (136)
T 2fo7_A 104 EAWYNLGNAYYK 115 (136)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 988888877654
No 173
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.85 E-value=7.1e-06 Score=80.59 Aligned_cols=80 Identities=11% Similarity=-0.025 Sum_probs=68.0
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..+...|..+++.|+|.+|+..|.++++..+. ...++.++|.|+.++++|.+|+..++++++++|
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~---------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 129 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK---------------HMEAWQYLGTTQAENEQELLAISALRRCLELKP 129 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC---------------CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCC
Confidence 34557889999999999999999999987332 266788999999999999999999999999999
Q ss_pred CCcchhccccccccc
Q 011003 480 QKGSGIHSDGRFRFG 494 (496)
Q Consensus 480 ~~~Ka~~rrg~a~~~ 494 (496)
++..+++.+|.++..
T Consensus 130 ~~~~~~~~l~~~~~~ 144 (368)
T 1fch_A 130 DNQTALMALAVSFTN 144 (368)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999988887754
No 174
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.84 E-value=7.4e-06 Score=84.60 Aligned_cols=82 Identities=13% Similarity=-0.012 Sum_probs=69.3
Q ss_pred hhHHhhhhhHhc--------ccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHH
Q 011003 401 KKKEQGNTLFKA--------GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCT 472 (496)
Q Consensus 401 ~~k~~Gn~~fk~--------~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~ 472 (496)
.+...|+.++.. |+|.+|+..|++|+++-+. ......+|.|+|.||.++++|.+|+..++
T Consensus 215 ~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~------------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 282 (474)
T 4abn_A 215 SWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRK------------ASSNPDLHLNRATLHKYEESYGEALEGFS 282 (474)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGG------------GGGCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCC------------cccCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 344567777777 9999999999999998330 00347889999999999999999999999
Q ss_pred HHhcccCCCcchhccccccccc
Q 011003 473 KKCESSVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 473 ~al~~dp~~~Ka~~rrg~a~~~ 494 (496)
+|++++|++..++++++.++..
T Consensus 283 ~al~l~p~~~~a~~~l~~~~~~ 304 (474)
T 4abn_A 283 QAAALDPAWPEPQQREQQLLEF 304 (474)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHH
Confidence 9999999999999999887654
No 175
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.83 E-value=8.9e-06 Score=84.12 Aligned_cols=78 Identities=10% Similarity=0.037 Sum_probs=69.0
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..+++.|+|++|+..|++|+++-+ ....++.|+|.+|+++++|++|+..+++|++++
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p---------------~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~ 104 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDK---------------KYIKGYYRRAASNMALGKFRAALRDYETVVKVK 104 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCT---------------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC---------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 34556788999999999999999999999833 336789999999999999999999999999999
Q ss_pred CCCcchhcccccc
Q 011003 479 VQKGSGIHSDGRF 491 (496)
Q Consensus 479 p~~~Ka~~rrg~a 491 (496)
|++..+++..+.+
T Consensus 105 p~~~~~~~~l~~~ 117 (477)
T 1wao_1 105 PHDKDAKMKYQEC 117 (477)
T ss_dssp TTCTTHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 9999998888766
No 176
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.83 E-value=2.9e-06 Score=74.59 Aligned_cols=77 Identities=4% Similarity=-0.068 Sum_probs=64.2
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
.++...++.++..|+|.+|+..|.++++.-+.. ..++.++|.+|+.+++|.+|+..++++++++|
T Consensus 11 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 75 (177)
T 2e2e_A 11 QRQRDPLHQFASQQNPEAQLQALQDKIRANPQN---------------SEQWALLGEYYLWQNDYSNSLLAYRQALQLRG 75 (177)
T ss_dssp CCSSTTTCCCC-----CCCCHHHHHHHHHCCSC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred HHHhhhhhhhhhccCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 456667888999999999999999999974332 67899999999999999999999999999999
Q ss_pred CCcchhcccccc
Q 011003 480 QKGSGIHSDGRF 491 (496)
Q Consensus 480 ~~~Ka~~rrg~a 491 (496)
++..+++.+|.+
T Consensus 76 ~~~~~~~~la~~ 87 (177)
T 2e2e_A 76 ENAELYAALATV 87 (177)
T ss_dssp SCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999999999988
No 177
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.82 E-value=8.9e-06 Score=84.02 Aligned_cols=81 Identities=16% Similarity=-0.004 Sum_probs=71.4
Q ss_pred HhhhHHhhhhhHhcccH-HHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 399 AGKKKEQGNTLFKAGKY-ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y-~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
+..+...|..++..|+| .+|+..|++|+++-+ ....++.++|.||+++++|.+|+..++++|++
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p---------------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~ 166 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEP---------------ELVEAWNQLGEVYWKKGDVTSAHTCFSGALTH 166 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCC---------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 34566788999999999 999999999999833 33678999999999999999999999999999
Q ss_pred cCCCcchhcccccccccc
Q 011003 478 SVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 478 dp~~~Ka~~rrg~a~~~l 495 (496)
+|+ ..+|+.+|.+|..+
T Consensus 167 ~p~-~~~~~~lg~~~~~~ 183 (474)
T 4abn_A 167 CKN-KVSLQNLSMVLRQL 183 (474)
T ss_dssp CCC-HHHHHHHHHHHTTC
T ss_pred CCC-HHHHHHHHHHHHHh
Confidence 999 69999999888754
No 178
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.82 E-value=9.5e-06 Score=65.78 Aligned_cols=68 Identities=10% Similarity=-0.015 Sum_probs=59.0
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..+...|..++..|+|.+|+..|.++++..+. ...++.|+|.||.+++++.+|+..+.++++++|
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---------------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDFDPT---------------YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC---------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 34567888999999999999999999998433 366889999999999999999999999999998
Q ss_pred CCc
Q 011003 480 QKG 482 (496)
Q Consensus 480 ~~~ 482 (496)
.+.
T Consensus 85 ~~~ 87 (115)
T 2kat_A 85 SRG 87 (115)
T ss_dssp HHT
T ss_pred ccc
Confidence 643
No 179
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.81 E-value=2.1e-05 Score=77.09 Aligned_cols=79 Identities=11% Similarity=-0.051 Sum_probs=68.1
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..+++.|+|.+|+..|+++++..+. ...++.|+|.++.++++|.+|+..++++++++|+
T Consensus 219 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~---------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 283 (368)
T 1fch_A 219 VQCGLGVLFNLSGEYDKAVDCFTAALSVRPN---------------DYLLWNKLGATLANGNQSEEAVAAYRRALELQPG 283 (368)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC---------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 4456788888999999999999999987332 2568899999999999999999999999999999
Q ss_pred Ccchhccccccccc
Q 011003 481 KGSGIHSDGRFRFG 494 (496)
Q Consensus 481 ~~Ka~~rrg~a~~~ 494 (496)
+..+++.+|.++..
T Consensus 284 ~~~~~~~l~~~~~~ 297 (368)
T 1fch_A 284 YIRSRYNLGISCIN 297 (368)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 99999999988764
No 180
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.81 E-value=3e-05 Score=63.37 Aligned_cols=78 Identities=22% Similarity=0.241 Sum_probs=67.4
Q ss_pred hHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCC
Q 011003 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQK 481 (496)
Q Consensus 402 ~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~ 481 (496)
+...|..++..|++.+|+..|.++++..+. ...++.++|.++...+++.+|+..++++++++|++
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~---------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 68 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALELDPR---------------SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 68 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHcCCc---------------chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc
Confidence 445688889999999999999999987322 25678899999999999999999999999999999
Q ss_pred cchhccccccccc
Q 011003 482 GSGIHSDGRFRFG 494 (496)
Q Consensus 482 ~Ka~~rrg~a~~~ 494 (496)
..+++..|.++..
T Consensus 69 ~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 69 AEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHH
Confidence 9999988877654
No 181
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.81 E-value=2.2e-05 Score=73.57 Aligned_cols=94 Identities=10% Similarity=0.065 Sum_probs=73.3
Q ss_pred hhHHhhhhhHh--------cccHHHHHHHHHHHhhhhccCCCCCh--HHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHH
Q 011003 401 KKKEQGNTLFK--------AGKYARASKRYEKAVKYIEYDTSFGD--EEKKQAKALKVACNLNNAACKLKLKDYKQAEKL 470 (496)
Q Consensus 401 ~~k~~Gn~~fk--------~~~y~~A~~~Y~~al~~~~~~~~~~~--~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~ 470 (496)
.+...|..+++ .|+|.+|+..|+++++..+....... .....+.......+.++|.||+++|+|.+|+..
T Consensus 91 a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 170 (261)
T 3qky_A 91 AEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVT 170 (261)
T ss_dssp HHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHH
Confidence 35567888888 99999999999999998654422111 112333444555679999999999999999999
Q ss_pred HHHHhcccCCC---cchhccccccccc
Q 011003 471 CTKKCESSVQK---GSGIHSDGRFRFG 494 (496)
Q Consensus 471 ~~~al~~dp~~---~Ka~~rrg~a~~~ 494 (496)
++++++.+|++ ..+++++|.+|..
T Consensus 171 ~~~~l~~~p~~~~~~~a~~~l~~~~~~ 197 (261)
T 3qky_A 171 YEAVFDAYPDTPWADDALVGAMRAYIA 197 (261)
T ss_dssp HHHHHHHCTTSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCchHHHHHHHHHHHHHH
Confidence 99999999984 5799999988864
No 182
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.80 E-value=2.1e-05 Score=75.33 Aligned_cols=89 Identities=16% Similarity=0.088 Sum_probs=69.9
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..++..|+|.+|+..|.+|++++...... ......+++|+|.+|.++++|.+|+..++++|++.
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~--------~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN--------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcc--------ccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4566778999999999999999999999875432210 22234789999999999999999999999999886
Q ss_pred CCC------cchhcccccccccc
Q 011003 479 VQK------GSGIHSDGRFRFGR 495 (496)
Q Consensus 479 p~~------~Ka~~rrg~a~~~l 495 (496)
++. ..+|+++|.++..+
T Consensus 227 ~~~~~~~~~~~~~~~lg~~y~~~ 249 (293)
T 2qfc_A 227 CRINSMALIGQLYYQRGECLRKL 249 (293)
T ss_dssp HHTTBCSSHHHHHHHHHHHHHHT
T ss_pred HhcCcHHHHHHHHHHHHHHHHHc
Confidence 431 56778888776543
No 183
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.79 E-value=3.3e-05 Score=72.23 Aligned_cols=81 Identities=12% Similarity=0.045 Sum_probs=61.0
Q ss_pred HHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCc
Q 011003 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKG 482 (496)
Q Consensus 403 k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~ 482 (496)
...|..++..|+|.+|+..|.++++ .... ......++.++|.|+.++++|.+|+..++++++++|++.
T Consensus 41 ~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~-----------~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~ 108 (272)
T 3u4t_A 41 NRRAVCYYELAKYDLAQKDIETYFS-KVNA-----------TKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRL 108 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHT-TSCT-----------TTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHh-ccCc-----------hhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccH
Confidence 3455556666666666666666666 2211 112355689999999999999999999999999999999
Q ss_pred chhcccccccccc
Q 011003 483 SGIHSDGRFRFGR 495 (496)
Q Consensus 483 Ka~~rrg~a~~~l 495 (496)
.+|+.+|.++..+
T Consensus 109 ~~~~~l~~~~~~~ 121 (272)
T 3u4t_A 109 DMYGQIGSYFYNK 121 (272)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 9999999887653
No 184
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.79 E-value=6.4e-05 Score=59.43 Aligned_cols=69 Identities=14% Similarity=0.090 Sum_probs=59.1
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhc-cCHHHHHHHHHHHhcccC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL-KDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl-~~~~~Ai~~~~~al~~dp 479 (496)
.+...|..++..|+|.+|+..|.++++..+. .....++.|+|.|+.++ +++.+|++.+++++..+|
T Consensus 42 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-------------~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p 108 (112)
T 2kck_A 42 YWLMKGKALYNLERYEEAVDCYNYVINVIED-------------EYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHH 108 (112)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC-------------TTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCcc-------------cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhccc
Confidence 3456788899999999999999999998443 00266889999999999 999999999999999999
Q ss_pred CCc
Q 011003 480 QKG 482 (496)
Q Consensus 480 ~~~ 482 (496)
++.
T Consensus 109 ~~~ 111 (112)
T 2kck_A 109 HHH 111 (112)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
No 185
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.79 E-value=3.3e-05 Score=67.10 Aligned_cols=47 Identities=6% Similarity=-0.122 Sum_probs=35.1
Q ss_pred HHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhccccccccc
Q 011003 448 VACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~ 494 (496)
..++.++|.++.+++++.+|+..++++++.+|++..+++..|.++..
T Consensus 110 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 156 (186)
T 3as5_A 110 FNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQ 156 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 45667777777778888888888888777777777777777766643
No 186
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.79 E-value=5.1e-05 Score=64.75 Aligned_cols=70 Identities=14% Similarity=0.079 Sum_probs=53.2
Q ss_pred hhhhhHhcc---cHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCC
Q 011003 405 QGNTLFKAG---KYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQK 481 (496)
Q Consensus 405 ~Gn~~fk~~---~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~ 481 (496)
-|..+.+.. ++++|+..++..++.- . ......++.|+|.+|+|+++|.+|+++|+++|+++|+|
T Consensus 38 ya~~Lv~S~~~~~~~~gI~lLe~ll~~~--~-----------p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n 104 (152)
T 1pc2_A 38 YAWCLVRSKYNDDIRKGIVLLEELLPKG--S-----------KEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQN 104 (152)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHHHHS--C-----------HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHhcC--C-----------ccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 344455544 6667777777776641 0 11457789999999999999999999999999999999
Q ss_pred cchhcc
Q 011003 482 GSGIHS 487 (496)
Q Consensus 482 ~Ka~~r 487 (496)
..|..-
T Consensus 105 ~QA~~L 110 (152)
T 1pc2_A 105 NQAKEL 110 (152)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877543
No 187
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.77 E-value=3.7e-05 Score=66.83 Aligned_cols=34 Identities=12% Similarity=-0.086 Sum_probs=17.0
Q ss_pred HhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCc
Q 011003 449 ACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKG 482 (496)
Q Consensus 449 ~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~ 482 (496)
.++.++|.++.+++++.+|+..++++++++|++.
T Consensus 145 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 145 KVHRAIAFSYEQMGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCch
Confidence 3444555555555555555555555555554443
No 188
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.76 E-value=2.7e-05 Score=77.41 Aligned_cols=48 Identities=13% Similarity=-0.055 Sum_probs=42.5
Q ss_pred HHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhcccccccccc
Q 011003 448 VACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
..++.|++.++.++|++.+|+..++++++++|++..+|+.+|.++..+
T Consensus 339 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~a~~~lg~~~~~~ 386 (388)
T 1w3b_A 339 AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEM 386 (388)
T ss_dssp HHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHhHHHHHHHc
Confidence 567889999999999999999999999999999999999999877643
No 189
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.73 E-value=1.8e-05 Score=65.89 Aligned_cols=67 Identities=12% Similarity=0.140 Sum_probs=59.1
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..+...|..++..|+|.+|+..|.+++++.+. ...++.|+|.|+.++++|.+|+..+.++++++|
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~---------------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p 108 (137)
T 3q49_B 44 VYYTNRALCYLKMQQPEQALADCRRALELDGQ---------------SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 108 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch---------------hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHCh
Confidence 34566788999999999999999999998433 367899999999999999999999999999999
Q ss_pred CC
Q 011003 480 QK 481 (496)
Q Consensus 480 ~~ 481 (496)
++
T Consensus 109 ~~ 110 (137)
T 3q49_B 109 EQ 110 (137)
T ss_dssp HT
T ss_pred hH
Confidence 83
No 190
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.73 E-value=2.3e-05 Score=75.29 Aligned_cols=77 Identities=13% Similarity=0.039 Sum_probs=69.0
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..+++.|+|.+|+..|+++++..+. ...++.++|.|+.+++++.+|+..++++++++|+
T Consensus 238 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~---------------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 302 (330)
T 3hym_B 238 LLNNLGHVCRKLKKYAEALDYHRQALVLIPQ---------------NASTYSAIGYIHSLMGNFENAVDYFHTALGLRRD 302 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------------CSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc---------------chHHHHHHHHHHHHhccHHHHHHHHHHHHccCCC
Confidence 3456788889999999999999999998433 3678999999999999999999999999999999
Q ss_pred Ccchhccccccc
Q 011003 481 KGSGIHSDGRFR 492 (496)
Q Consensus 481 ~~Ka~~rrg~a~ 492 (496)
+..+++.+|.++
T Consensus 303 ~~~~~~~l~~~~ 314 (330)
T 3hym_B 303 DTFSVTMLGHCI 314 (330)
T ss_dssp CHHHHHHHHHHH
T ss_pred chHHHHHHHHHH
Confidence 999999999877
No 191
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.72 E-value=4.4e-05 Score=69.93 Aligned_cols=46 Identities=9% Similarity=0.010 Sum_probs=27.1
Q ss_pred HHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhcccccccc
Q 011003 448 VACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRF 493 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~ 493 (496)
..++.++|.++++++++.+|+..++++++.+|++..+++.+|.++.
T Consensus 159 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 204 (243)
T 2q7f_A 159 TEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYA 204 (243)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 3445556666666666666666666666666666666665555544
No 192
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.72 E-value=4.7e-05 Score=69.71 Aligned_cols=47 Identities=13% Similarity=-0.072 Sum_probs=36.0
Q ss_pred HHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhccccccccc
Q 011003 448 VACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~ 494 (496)
..++.++|.+++++++|.+|+..++++++++|++..+++.+|.++..
T Consensus 125 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 171 (243)
T 2q7f_A 125 GDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLAN 171 (243)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH
Confidence 45677788888888888888888888888888888887777776653
No 193
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.71 E-value=3.7e-05 Score=73.68 Aligned_cols=89 Identities=12% Similarity=0.002 Sum_probs=67.9
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhc-cCHHHHHHHHHHHhc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL-KDYKQAEKLCTKKCE 476 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl-~~~~~Ai~~~~~al~ 476 (496)
.+..+...|+.+.+.|+|.+|+..|.+|+++...... ......++.|+|.+|.++ +++.+|+.++++||+
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~---------~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~ 146 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQ---------FRRGANFKFELGEILENDLHDYAKAIDCYELAGE 146 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 3556667788888888888888888888887532210 223367899999999995 999999999999999
Q ss_pred ccCCC------cchhcccccccccc
Q 011003 477 SSVQK------GSGIHSDGRFRFGR 495 (496)
Q Consensus 477 ~dp~~------~Ka~~rrg~a~~~l 495 (496)
+.|.+ ..+|.+.|.++..+
T Consensus 147 ~~~~~~~~~~~~~~~~~lg~~~~~~ 171 (292)
T 1qqe_A 147 WYAQDQSVALSNKCFIKCADLKALD 171 (292)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCCChHHHHHHHHHHHHHHHHh
Confidence 98865 45677777766543
No 194
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.70 E-value=2.1e-05 Score=83.04 Aligned_cols=88 Identities=9% Similarity=-0.013 Sum_probs=61.6
Q ss_pred hHHhhhhhHhcccHHHHHHHHHHHhhhhccCCC-----------CCh--HH------HHHHHHHHHHhhhHHHHHHHhc-
Q 011003 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS-----------FGD--EE------KKQAKALKVACNLNNAACKLKL- 461 (496)
Q Consensus 402 ~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~-----------~~~--~~------~~~~~~~~~~~~~N~a~~~~kl- 461 (496)
+...|..+++.|+|++|+..|++|++..+.+.. ..+ +- ..++.+....++.|++.++.++
T Consensus 60 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 139 (568)
T 2vsy_A 60 VARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLC 139 (568)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Confidence 445666677777777777777777775332100 000 00 0112233467899999999999
Q ss_pred --cCHHHHHHHHHHHhcccCCCcchhcccc
Q 011003 462 --KDYKQAEKLCTKKCESSVQKGSGIHSDG 489 (496)
Q Consensus 462 --~~~~~Ai~~~~~al~~dp~~~Ka~~rrg 489 (496)
+++.+|+..++++|+.+|++..+|+..+
T Consensus 140 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 169 (568)
T 2vsy_A 140 DWRALDVLSAQVRAAVAQGVGAVEPFAFLS 169 (568)
T ss_dssp CCTTHHHHHHHHHHHHHHTCCCSCHHHHTT
T ss_pred ccccHHHHHHHHHHHHhcCCcccChHHHhC
Confidence 9999999999999999999999887655
No 195
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=97.70 E-value=4.7e-05 Score=75.71 Aligned_cols=90 Identities=12% Similarity=0.094 Sum_probs=73.6
Q ss_pred HHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhc
Q 011003 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCE 476 (496)
Q Consensus 397 ~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 476 (496)
..+..+...|..++..|+|.+|+..|.+|+++.+... -......++.|+|.||.++++|.+|+..+++|++
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~---------~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 252 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK---------QPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIA 252 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT---------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcC---------ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3445566778899999999999999999999865321 1445577899999999999999999999999999
Q ss_pred -----cc-CCCcchhcccccccccc
Q 011003 477 -----SS-VQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 477 -----~d-p~~~Ka~~rrg~a~~~l 495 (496)
.+ |....+++..|.++..+
T Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~ 277 (383)
T 3ulq_A 253 VFEESNILPSLPQAYFLITQIHYKL 277 (383)
T ss_dssp HHHHTTCGGGHHHHHHHHHHHHHHT
T ss_pred HHHhhccchhHHHHHHHHHHHHHHC
Confidence 46 77788899888887654
No 196
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.69 E-value=3.9e-05 Score=64.90 Aligned_cols=74 Identities=16% Similarity=0.096 Sum_probs=42.6
Q ss_pred HHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhc
Q 011003 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCE 476 (496)
Q Consensus 397 ~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 476 (496)
..+..+...|..++..|+|.+|+..|.+++++.+.... ......++.|+|.++..+++|.+|+..++++++
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 77 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERIAYSNLGNAYIFLGEFETASEYYKKTLL 77 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCC---------chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34455566677777777777777777777766432100 222344555666666666666666666666555
Q ss_pred ccC
Q 011003 477 SSV 479 (496)
Q Consensus 477 ~dp 479 (496)
+.+
T Consensus 78 ~~~ 80 (164)
T 3ro3_A 78 LAR 80 (164)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 197
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.68 E-value=5.1e-05 Score=75.41 Aligned_cols=90 Identities=11% Similarity=-0.087 Sum_probs=74.1
Q ss_pred HHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhc
Q 011003 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCE 476 (496)
Q Consensus 397 ~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 476 (496)
..+..+...|..++..|+|.+|+..|.+|+++..... -......++.|+|.||..+++|.+|+..+++|++
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~---------~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQ---------NDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT---------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3455666788999999999999999999999864321 0335677899999999999999999999999999
Q ss_pred -----ccCCCcchhcccccccccc
Q 011003 477 -----SSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 477 -----~dp~~~Ka~~rrg~a~~~l 495 (496)
.+|....+++..|.++..+
T Consensus 251 ~~~~~~~~~~~~~~~~la~~~~~~ 274 (378)
T 3q15_A 251 VSREKVPDLLPKVLFGLSWTLCKA 274 (378)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHT
T ss_pred HHHhhCChhHHHHHHHHHHHHHHC
Confidence 7888888999888887643
No 198
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.67 E-value=4.2e-05 Score=73.47 Aligned_cols=88 Identities=19% Similarity=0.057 Sum_probs=67.8
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..+++.|+|.+|+..|.++++..+....... .+....++.|+|.++.+++++.+|+..++++++++|+
T Consensus 195 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 268 (330)
T 3hym_B 195 VMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVT------VDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ 268 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCT------TTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHhhhcccccc------ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc
Confidence 3445677777888888888888888877532211000 0122568899999999999999999999999999999
Q ss_pred Ccchhccccccccc
Q 011003 481 KGSGIHSDGRFRFG 494 (496)
Q Consensus 481 ~~Ka~~rrg~a~~~ 494 (496)
+..+|+.+|.++..
T Consensus 269 ~~~~~~~la~~~~~ 282 (330)
T 3hym_B 269 NASTYSAIGYIHSL 282 (330)
T ss_dssp CSHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH
Confidence 99999999988764
No 199
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.67 E-value=1.8e-05 Score=73.32 Aligned_cols=95 Identities=11% Similarity=0.034 Sum_probs=50.3
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCC-----------CCh--HHH------HHHHHHHHHhhhHHHHHHH
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS-----------FGD--EEK------KQAKALKVACNLNNAACKL 459 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~-----------~~~--~~~------~~~~~~~~~~~~N~a~~~~ 459 (496)
+..+...|..++..|+|.+|+..|.++++..+.... ..+ +-. .+..+....++.++|.+++
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 116 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLY 116 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH
Confidence 455666777777777777777777777765321100 000 000 0001112345555666666
Q ss_pred hccCHHHHHHHHHHHhc--ccCCCcchhcccccccc
Q 011003 460 KLKDYKQAEKLCTKKCE--SSVQKGSGIHSDGRFRF 493 (496)
Q Consensus 460 kl~~~~~Ai~~~~~al~--~dp~~~Ka~~rrg~a~~ 493 (496)
++++|.+|+..++++++ .+|.+..+++.+|.+++
T Consensus 117 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~ 152 (252)
T 2ho1_A 117 EQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSL 152 (252)
T ss_dssp HTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHH
Confidence 66666666666666665 55555555555555543
No 200
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.67 E-value=4.2e-05 Score=73.37 Aligned_cols=81 Identities=9% Similarity=-0.072 Sum_probs=61.4
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..++..|+|.+|+..|+++++..+. ...++.++|.++.++++|.+|+..++++++++
T Consensus 21 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---------------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 85 (327)
T 3cv0_A 21 HENPMEEGLSMLKLANLAEAALAFEAVCQAAPE---------------REEAWRSLGLTQAENEKDGLAIIALNHARMLD 85 (327)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC---------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 345567788888888899999988888886332 25567778888888888888888888888888
Q ss_pred CCCcchhccccccccc
Q 011003 479 VQKGSGIHSDGRFRFG 494 (496)
Q Consensus 479 p~~~Ka~~rrg~a~~~ 494 (496)
|++..+++.+|.++..
T Consensus 86 ~~~~~~~~~la~~~~~ 101 (327)
T 3cv0_A 86 PKDIAVHAALAVSHTN 101 (327)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH
Confidence 8888777777766643
No 201
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.65 E-value=2.5e-05 Score=77.61 Aligned_cols=94 Identities=13% Similarity=0.025 Sum_probs=56.5
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCC--------------CCChH-----HHHHHHHHHHHhhhHHHHHHHh
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT--------------SFGDE-----EKKQAKALKVACNLNNAACKLK 460 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~--------------~~~~~-----~~~~~~~~~~~~~~N~a~~~~k 460 (496)
..+...|+.+++.|+|.+|+..|+++++.-+... ...+. ...+..+....++.+++.++.+
T Consensus 68 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 147 (388)
T 1w3b_A 68 EAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKA 147 (388)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 3466788889999999999999999998633220 00000 0001112223445566666666
Q ss_pred ccCHHHHHHHHHHHhcccCCCcchhcccccccc
Q 011003 461 LKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRF 493 (496)
Q Consensus 461 l~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~ 493 (496)
++++.+|+..+.++++++|++..+|+.+|.++.
T Consensus 148 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 180 (388)
T 1w3b_A 148 LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFN 180 (388)
T ss_dssp TSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 666666666666666666666666666665554
No 202
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.65 E-value=1.6e-05 Score=63.08 Aligned_cols=50 Identities=14% Similarity=-0.047 Sum_probs=45.9
Q ss_pred HHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhcccccccccc
Q 011003 446 LKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 446 ~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
....++.|+|.+|+++++|.+|+..++++++++|++..+|+.+|.+|..+
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~ 54 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERL 54 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 34678999999999999999999999999999999999999999988654
No 203
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.64 E-value=5.1e-05 Score=70.85 Aligned_cols=91 Identities=19% Similarity=0.086 Sum_probs=73.9
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.+..+...|..++..|+|.+|+..|.+++++.......+ .+....++.|+|.+|..+++|.+|+..+.+++++
T Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 114 (283)
T 3edt_B 42 VATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKD-------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEI 114 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCc-------chHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 455667789999999999999999999999853210000 3556789999999999999999999999999998
Q ss_pred --------cCCCcchhcccccccccc
Q 011003 478 --------SVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 478 --------dp~~~Ka~~rrg~a~~~l 495 (496)
+|....+++..|.++..+
T Consensus 115 ~~~~~~~~~~~~~~~~~~la~~~~~~ 140 (283)
T 3edt_B 115 REKVLGKFHPDVAKQLNNLALLCQNQ 140 (283)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHHc
Confidence 577788888888877654
No 204
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.63 E-value=4.5e-05 Score=70.53 Aligned_cols=79 Identities=16% Similarity=0.132 Sum_probs=45.3
Q ss_pred hHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCC
Q 011003 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQK 481 (496)
Q Consensus 402 ~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~ 481 (496)
+...|..++..|+|.+|+..|.++++ ... .+....++.++|.++++++++.+|+..++++++++|++
T Consensus 108 ~~~la~~~~~~g~~~~A~~~~~~~~~-~~~------------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~ 174 (252)
T 2ho1_A 108 LNNYGGFLYEQKRYEEAYQRLLEASQ-DTL------------YPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQ 174 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTT-CTT------------CTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHh-Ccc------------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCccc
Confidence 34456677777888888888888776 100 11123445555555555555555555555555555555
Q ss_pred cchhcccccccc
Q 011003 482 GSGIHSDGRFRF 493 (496)
Q Consensus 482 ~Ka~~rrg~a~~ 493 (496)
..+++.+|.++.
T Consensus 175 ~~~~~~la~~~~ 186 (252)
T 2ho1_A 175 PSVALEMADLLY 186 (252)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555554443
No 205
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.63 E-value=3.6e-05 Score=71.94 Aligned_cols=80 Identities=8% Similarity=-0.124 Sum_probs=67.8
Q ss_pred hhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcch
Q 011003 405 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSG 484 (496)
Q Consensus 405 ~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka 484 (496)
.+..+...++|++|+..|.++++..... .+....++.++|.++..+++|.+|+..++++++++|++..+
T Consensus 11 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 79 (275)
T 1xnf_A 11 LAVPLQPTLQQEVILARMEQILASRALT-----------DDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEV 79 (275)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHHTSSCCC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHH
T ss_pred eeeccCccchHHHHHHHHHHHHhccccc-----------CchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHH
Confidence 3445566799999999999999863322 45568889999999999999999999999999999999999
Q ss_pred hcccccccccc
Q 011003 485 IHSDGRFRFGR 495 (496)
Q Consensus 485 ~~rrg~a~~~l 495 (496)
|+.+|.++..+
T Consensus 80 ~~~la~~~~~~ 90 (275)
T 1xnf_A 80 FNYLGIYLTQA 90 (275)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 99999887643
No 206
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.63 E-value=3.8e-05 Score=69.21 Aligned_cols=79 Identities=18% Similarity=0.179 Sum_probs=51.2
Q ss_pred hHHhhhhhHhc-ccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 402 KKEQGNTLFKA-GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 402 ~k~~Gn~~fk~-~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
+...|..++.. |++.+|+..|.++++ ... .+....++.++|.++.+++++.+|+..++++++.+|+
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~~~~~-~~~------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 145 (225)
T 2vq2_A 79 NNNYGWFLCGRLNRPAESMAYFDKALA-DPT------------YPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQ 145 (225)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHT-STT------------CSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHc-CcC------------CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 34456666777 777777777777776 111 1112455667777777777777777777777777777
Q ss_pred Ccchhcccccccc
Q 011003 481 KGSGIHSDGRFRF 493 (496)
Q Consensus 481 ~~Ka~~rrg~a~~ 493 (496)
+..+++..|.++.
T Consensus 146 ~~~~~~~la~~~~ 158 (225)
T 2vq2_A 146 FPPAFKELARTKM 158 (225)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHH
Confidence 7777666666554
No 207
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.60 E-value=6.7e-05 Score=72.46 Aligned_cols=85 Identities=9% Similarity=0.024 Sum_probs=55.6
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..+.. |+|.+|+..|++|+++.+.... ......++.|+|.+|.++++|.+|+..+++++++.
T Consensus 116 a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~---------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 116 AMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEER---------LRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC---------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 3445556666666 8888888888888877543210 12335677788888888888888888888888776
Q ss_pred CCCc------chhcccccccc
Q 011003 479 VQKG------SGIHSDGRFRF 493 (496)
Q Consensus 479 p~~~------Ka~~rrg~a~~ 493 (496)
|.+. .+++.+|.+++
T Consensus 186 ~~~~~~~~~~~~~~~~g~~~~ 206 (307)
T 2ifu_A 186 KEMENYPTCYKKCIAQVLVQL 206 (307)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHcCChhHHHHHHHHHHHHHH
Confidence 6543 25555555544
No 208
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.59 E-value=2.7e-05 Score=68.49 Aligned_cols=69 Identities=19% Similarity=0.152 Sum_probs=56.0
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..+...|..++..|+|.+|+..|+++++. ++....++.++|.+++++|++.+|+..++++++++|
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~---------------~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p 71 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDE---------------LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ 71 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHH---------------HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHH---------------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC
Confidence 34567888899999999999999999987 555577888888888888888888888888777777
Q ss_pred CCcch
Q 011003 480 QKGSG 484 (496)
Q Consensus 480 ~~~Ka 484 (496)
+...
T Consensus 72 -~~~~ 75 (176)
T 2r5s_A 72 -DNSY 75 (176)
T ss_dssp -CHHH
T ss_pred -ChHH
Confidence 5543
No 209
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.58 E-value=9e-05 Score=70.97 Aligned_cols=80 Identities=10% Similarity=-0.080 Sum_probs=68.6
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..+++.|++.+|+..|.++++..+.. ..++.++|.++.+++++.+|+..++++++++|+
T Consensus 174 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 238 (327)
T 3cv0_A 174 LHASLGVLYNLSNNYDSAAANLRRAVELRPDD---------------AQLWNKLGATLANGNRPQEALDAYNRALDINPG 238 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 44567888889999999999999999874332 567899999999999999999999999999999
Q ss_pred Ccchhcccccccccc
Q 011003 481 KGSGIHSDGRFRFGR 495 (496)
Q Consensus 481 ~~Ka~~rrg~a~~~l 495 (496)
+..+++.+|.++..+
T Consensus 239 ~~~~~~~l~~~~~~~ 253 (327)
T 3cv0_A 239 YVRVMYNMAVSYSNM 253 (327)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999988877643
No 210
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.58 E-value=5.6e-05 Score=75.45 Aligned_cols=86 Identities=14% Similarity=0.067 Sum_probs=53.3
Q ss_pred HHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHh
Q 011003 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKC 475 (496)
Q Consensus 396 ~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 475 (496)
...+..+...|..++..|+|.+|+..|+++++..+.+ ......++.++|.+|+.+++|.+|+..+++++
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~-----------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 113 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTED-----------LRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDL 113 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC-----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccC-----------hhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4556777789999999999999999999999874332 22223445555555555555555555555555
Q ss_pred cc------cCCCcchhccccccc
Q 011003 476 ES------SVQKGSGIHSDGRFR 492 (496)
Q Consensus 476 ~~------dp~~~Ka~~rrg~a~ 492 (496)
++ +|....+|+.+|.++
T Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~~ 136 (411)
T 4a1s_A 114 TLAKSMNDRLGEAKSSGNLGNTL 136 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHccCchHHHHHHHHHHHHH
Confidence 44 344444444444443
No 211
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.58 E-value=5.6e-05 Score=70.59 Aligned_cols=91 Identities=13% Similarity=-0.052 Sum_probs=73.7
Q ss_pred HHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhc
Q 011003 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCE 476 (496)
Q Consensus 397 ~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 476 (496)
..+..+...|..++..|+|.+|+..|.+|+++........ .+....++.|+|.+|..+++|.+|+..++++++
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 155 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKF-------HPDVAKQLNNLALLCQNQGKAEEVEYYYRRALE 155 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3455667789999999999999999999999853211100 245678899999999999999999999999999
Q ss_pred c--------cCCCcchhccccccccc
Q 011003 477 S--------SVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 477 ~--------dp~~~Ka~~rrg~a~~~ 494 (496)
+ +|.+..+++..|.++..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~la~~~~~ 181 (283)
T 3edt_B 156 IYATRLGPDDPNVAKTKNNLASCYLK 181 (283)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 8 77778888888887754
No 212
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.56 E-value=7.2e-05 Score=68.60 Aligned_cols=88 Identities=7% Similarity=-0.129 Sum_probs=65.8
Q ss_pred hhHhcccHHHHHHHHHHHhhhhccCCCCCh--HHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCc---
Q 011003 408 TLFKAGKYARASKRYEKAVKYIEYDTSFGD--EEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKG--- 482 (496)
Q Consensus 408 ~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~--~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~--- 482 (496)
.....|++.+|+..|+++++..+.+..... .....+.........++|.+|++.++|.+|+..++++++..|++.
T Consensus 105 ~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 184 (225)
T 2yhc_A 105 SDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATR 184 (225)
T ss_dssp ---CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHH
T ss_pred hhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccH
Confidence 334578999999999999998665432211 111223333445567899999999999999999999999999986
Q ss_pred chhcccccccccc
Q 011003 483 SGIHSDGRFRFGR 495 (496)
Q Consensus 483 Ka~~rrg~a~~~l 495 (496)
+|++++|.++..+
T Consensus 185 ~a~~~l~~~~~~~ 197 (225)
T 2yhc_A 185 DALPLMENAYRQM 197 (225)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 7899999988765
No 213
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.50 E-value=0.00014 Score=61.40 Aligned_cols=86 Identities=19% Similarity=0.169 Sum_probs=65.5
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..++..|+|.+|+..|.+++++.+.... ......++.|+|.++..+++|.+|+..+++++++.
T Consensus 49 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD---------RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC---------cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 345667889999999999999999999998654211 33457788999999999999999999999998874
Q ss_pred CCC------cchhcccccccc
Q 011003 479 VQK------GSGIHSDGRFRF 493 (496)
Q Consensus 479 p~~------~Ka~~rrg~a~~ 493 (496)
+.. ..+++..|.++.
T Consensus 120 ~~~~~~~~~~~~~~~la~~~~ 140 (164)
T 3ro3_A 120 QELKDRIGEGRACWSLGNAYT 140 (164)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHccchHhHHHHHHHHHHHHH
Confidence 322 345666665554
No 214
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.47 E-value=0.0001 Score=70.38 Aligned_cols=93 Identities=16% Similarity=0.140 Sum_probs=50.1
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCC---------------CCh-HHH-------------HHHHHHHHHh
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS---------------FGD-EEK-------------KQAKALKVAC 450 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~---------------~~~-~~~-------------~~~~~~~~~~ 450 (496)
..+...|..++..|+|.+|+..|+++++..+.+.. ..+ ++- ....+....+
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 85 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKA 85 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 34556677777777777777777777775322100 000 000 0002333555
Q ss_pred hhHHHHHHHhccCHHHHHHHHHHHhcccCCCcc------hhccccccc
Q 011003 451 NLNNAACKLKLKDYKQAEKLCTKKCESSVQKGS------GIHSDGRFR 492 (496)
Q Consensus 451 ~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~K------a~~rrg~a~ 492 (496)
+.++|.+|..+++|.+|+..+.+++++.+.... +++..|.++
T Consensus 86 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~ 133 (338)
T 3ro2_A 86 SGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVY 133 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 666666666666666666666666666554322 555555444
No 215
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.46 E-value=5.6e-05 Score=72.35 Aligned_cols=80 Identities=13% Similarity=0.046 Sum_probs=57.8
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHH---------
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKL--------- 470 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~--------- 470 (496)
..+...|..++..|++.+|+..|+++++.-+.+ ..++.++|.+++.+|++.+|+..
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~---------------~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p 182 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQLSNQN---------------GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQ 182 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSC---------------HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGC
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcc---------------hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhc
Confidence 456788999999999999999999999984332 55666666666666666666554
Q ss_pred -------------------------HHHHhcccCCCcchhccccccccc
Q 011003 471 -------------------------CTKKCESSVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 471 -------------------------~~~al~~dp~~~Ka~~rrg~a~~~ 494 (496)
+.++++++|++..+++.+|.+|..
T Consensus 183 ~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~ 231 (287)
T 3qou_A 183 DTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQ 231 (287)
T ss_dssp SHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence 445566677777777777766543
No 216
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=97.42 E-value=0.0002 Score=71.09 Aligned_cols=90 Identities=12% Similarity=0.031 Sum_probs=67.5
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.+..+...|..++..|+|..|+..|.+|++++..... .......+++|+|.||..+++|.+|+..+++|+++
T Consensus 142 ~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~--------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 213 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEA--------YNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSM 213 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCST--------THHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcc--------chHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 4455566777777778888888888888877544311 13445789999999999999999999999999998
Q ss_pred cCCCc------chhcccccccccc
Q 011003 478 SVQKG------SGIHSDGRFRFGR 495 (496)
Q Consensus 478 dp~~~------Ka~~rrg~a~~~l 495 (496)
.+... .+++..|.+|..+
T Consensus 214 ~~~~~~~~~~~~~~~~lg~~y~~~ 237 (383)
T 3ulq_A 214 AEAEKQPQLMGRTLYNIGLCKNSQ 237 (383)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCChHHHHHHHHHHHHHHHHC
Confidence 66543 4788888776543
No 217
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.41 E-value=6.2e-05 Score=71.84 Aligned_cols=70 Identities=11% Similarity=0.122 Sum_probs=60.8
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..+...|..+++.|+|.+|+..|.+|+++-+ ....+++|+|.+|.++++|.+|+..+.++++++|
T Consensus 39 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p---------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 39 VYYTNRALCYLKMQQPEQALADCRRALELDG---------------QSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTSCT---------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC---------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 3455688899999999999999999999833 3367899999999999999999999999999999
Q ss_pred CCcch
Q 011003 480 QKGSG 484 (496)
Q Consensus 480 ~~~Ka 484 (496)
++...
T Consensus 104 ~~~~~ 108 (281)
T 2c2l_A 104 EQRLN 108 (281)
T ss_dssp HTTCC
T ss_pred cchhh
Confidence 87543
No 218
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.41 E-value=0.00016 Score=74.70 Aligned_cols=95 Identities=13% Similarity=0.089 Sum_probs=74.6
Q ss_pred HHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHH
Q 011003 393 EEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCT 472 (496)
Q Consensus 393 ~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~ 472 (496)
.+.++.+....+++..+..+|+|++|+..|.++|+........+ .+..+..++|+|.+|..+|+|.+|+..+.
T Consensus 303 ~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~ 375 (490)
T 3n71_A 303 KEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADT-------NLYVLRLLSIASEVLSYLQAYEEASHYAR 375 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCC-------CHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 35566777788888889999999999999999999865432222 45678899999999999999999999999
Q ss_pred HHhccc-----CCC---cchhccccccccc
Q 011003 473 KKCESS-----VQK---GSGIHSDGRFRFG 494 (496)
Q Consensus 473 ~al~~d-----p~~---~Ka~~rrg~a~~~ 494 (496)
++|++. |++ ..+|++.|.+|..
T Consensus 376 ~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~ 405 (490)
T 3n71_A 376 RMVDGYMKLYHHNNAQLGMAVMRAGLTNWH 405 (490)
T ss_dssp HHHHHHHHHSCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 999763 444 4566666666654
No 219
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.39 E-value=0.00024 Score=74.70 Aligned_cols=80 Identities=14% Similarity=-0.073 Sum_probs=70.1
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..+...|..+++.|++++|+..|+++++.-+.+ ..+|.+++.+|.++|+|++|+..++++++++|
T Consensus 517 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p 581 (597)
T 2xpi_A 517 ATWANLGHAYRKLKMYDAAIDALNQGLLLSTND---------------ANVHTAIALVYLHKKIPGLAITHLHESLAISP 581 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Confidence 345567888899999999999999999974332 67899999999999999999999999999999
Q ss_pred CCcchhccccccccc
Q 011003 480 QKGSGIHSDGRFRFG 494 (496)
Q Consensus 480 ~~~Ka~~rrg~a~~~ 494 (496)
++..+++.++.+|..
T Consensus 582 ~~~~~~~~l~~~~~~ 596 (597)
T 2xpi_A 582 NEIMASDLLKRALEE 596 (597)
T ss_dssp TCHHHHHHHHHTTC-
T ss_pred CChHHHHHHHHHHhc
Confidence 999999999988753
No 220
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.39 E-value=0.00016 Score=64.12 Aligned_cols=87 Identities=7% Similarity=0.039 Sum_probs=68.8
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.+..+...|..++..|+|.+|+..|.+++.++..... ......++.|+|.+|..+++|.+|+..+.+++++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD---------HTAEHRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC---------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3556677899999999999999999999998653211 4556788999999999999999999999999998
Q ss_pred ---cCC----Ccchhcccccccc
Q 011003 478 ---SVQ----KGSGIHSDGRFRF 493 (496)
Q Consensus 478 ---dp~----~~Ka~~rrg~a~~ 493 (496)
.++ ...+++..|.++.
T Consensus 96 ~~~~~~~~~~~~~~~~~lg~~~~ 118 (203)
T 3gw4_A 96 LASLPEDPLAASANAYEVATVAL 118 (203)
T ss_dssp HHHSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHcCccHHHHHHHHHHHHHHHH
Confidence 332 2445666666554
No 221
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=97.38 E-value=0.00013 Score=72.22 Aligned_cols=29 Identities=24% Similarity=0.281 Sum_probs=20.4
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhh
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKY 428 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~ 428 (496)
..+...|..+++.|+|.+|+..|+++++.
T Consensus 10 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~ 38 (406)
T 3sf4_A 10 LELALEGERLCKSGDCRAGVSFFEAAVQV 38 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhc
Confidence 34456677777777777777777777776
No 222
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.36 E-value=0.00011 Score=70.82 Aligned_cols=87 Identities=14% Similarity=0.022 Sum_probs=64.7
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|+.+.+.|+|.+|+..|.+|+++...... ......++.|+|.+|.+ ++|.+|+..+++||++.
T Consensus 76 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~---------~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~ 145 (307)
T 2ifu_A 76 AKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGT---------PDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVF 145 (307)
T ss_dssp HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTC---------HHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHH
Confidence 445556677777788888888888888887532210 22346789999999999 99999999999999988
Q ss_pred CCC------cchhcccccccccc
Q 011003 479 VQK------GSGIHSDGRFRFGR 495 (496)
Q Consensus 479 p~~------~Ka~~rrg~a~~~l 495 (496)
+.. ..+|++.|.+|..+
T Consensus 146 ~~~~~~~~~~~~~~~lg~~~~~~ 168 (307)
T 2ifu_A 146 ENEERLRQAAELIGKASRLLVRQ 168 (307)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HhCCChhHHHHHHHHHHHHHHHc
Confidence 754 46777777766543
No 223
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.33 E-value=0.00027 Score=71.61 Aligned_cols=74 Identities=16% Similarity=0.238 Sum_probs=62.2
Q ss_pred CCCCCCeEEEEEEEEEcCCcEEEEcCCCCCcccEEEEcCccchhhHHHHHHhccccCcEEEEEEcCCCccCCcccccccc
Q 011003 285 RPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELA 364 (496)
Q Consensus 285 ~p~~~~~V~v~y~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~ 364 (496)
....||.|+|+|.++ .||..|+++ ...++.+.+|.+. + |+.+|.||++||...|.+..
T Consensus 154 ~a~~gD~V~id~~~~-~dG~~~~~~----~~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF-------------- 211 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY-NEEGKKLTS----REYEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY-------------- 211 (433)
T ss_dssp CCCTTSEEEEEEEEE-CTTSCEEEE----EEEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE--------------
T ss_pred ccCCCCEEEEEEEEE-ECCEECcCC----CCCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee--------------
Confidence 357899999999988 589999764 3578888899887 3 99999999999999999843
Q ss_pred CCCCCCeEEEEEEEeeeec
Q 011003 365 VVPPNSTVHYEVELVSFEK 383 (496)
Q Consensus 365 ~ip~~~~l~f~v~l~~~~~ 383 (496)
+|.+..|.|+|.++..
T Consensus 212 ---aGk~a~F~VtV~~Ik~ 227 (433)
T 3gty_X 212 ---EGKKYTYKLEVEEVYK 227 (433)
T ss_dssp ---TTEEEEEEEEEEEEEE
T ss_pred ---CCCeEEEEEEEEEEEE
Confidence 3557999999999985
No 224
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.31 E-value=0.00015 Score=68.75 Aligned_cols=94 Identities=12% Similarity=-0.012 Sum_probs=75.4
Q ss_pred HHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHH
Q 011003 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKK 474 (496)
Q Consensus 395 ~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 474 (496)
....+..+...|..++..|+|.+|+..|+++++++...... -.+....++.++|.+|..+++|.+|+..+.++
T Consensus 23 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~-------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 95 (311)
T 3nf1_A 23 IPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGH-------DHPDVATMLNILALVYRDQNKYKDAANLLNDA 95 (311)
T ss_dssp SCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCS-------SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCC-------CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 34556778889999999999999999999999975421100 03556788999999999999999999999999
Q ss_pred hcc--------cCCCcchhcccccccccc
Q 011003 475 CES--------SVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 475 l~~--------dp~~~Ka~~rrg~a~~~l 495 (496)
+++ +|....+++..|.++..+
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 124 (311)
T 3nf1_A 96 LAIREKTLGKDHPAVAATLNNLAVLYGKR 124 (311)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHHHHc
Confidence 987 456677888888777543
No 225
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.28 E-value=0.00021 Score=67.80 Aligned_cols=90 Identities=14% Similarity=0.003 Sum_probs=71.6
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.+..+...|..++..|+|.+|+..|.+++++....... -.+....++.|+|.++.++++|.+|+..+++++++
T Consensus 110 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~-------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 110 VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGK-------DHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCC-------CChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34456677888999999999999999999985221000 02456788999999999999999999999999998
Q ss_pred --------cCCCcchhccccccccc
Q 011003 478 --------SVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 478 --------dp~~~Ka~~rrg~a~~~ 494 (496)
+|....+++..|.++..
T Consensus 183 ~~~~~~~~~~~~~~~~~~la~~~~~ 207 (311)
T 3nf1_A 183 YQTKLGPDDPNVAKTKNNLASCYLK 207 (311)
T ss_dssp HHHTSCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 67777888888877654
No 226
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.26 E-value=0.00028 Score=71.67 Aligned_cols=95 Identities=14% Similarity=0.014 Sum_probs=70.9
Q ss_pred HHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHH
Q 011003 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTK 473 (496)
Q Consensus 394 e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~ 473 (496)
+.+..+....+++...-..|+|.+|+..|.++|+........+ ++..+..++|+|.+|..+|+|++|+..+.+
T Consensus 293 ~~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~ 365 (433)
T 3qww_A 293 DMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDS-------NVYMLHMMYQAMGVCLYMQDWEGALKYGQK 365 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChh-------chHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 3344555566666666678999999999999999764432221 556688999999999999999999999999
Q ss_pred Hhcc-----cCCC---cchhcccccccccc
Q 011003 474 KCES-----SVQK---GSGIHSDGRFRFGR 495 (496)
Q Consensus 474 al~~-----dp~~---~Ka~~rrg~a~~~l 495 (496)
+|++ -|++ ...|++.|.+|..+
T Consensus 366 aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~q 395 (433)
T 3qww_A 366 IIKPYSKHYPVYSLNVASMWLKLGRLYMGL 395 (433)
T ss_dssp HHHHHHHHSCSSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCChHHHHHHHHHHHHHHhc
Confidence 9976 2444 45677777766543
No 227
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.26 E-value=0.00016 Score=74.83 Aligned_cols=79 Identities=13% Similarity=0.037 Sum_probs=54.4
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
.+...|..++..|+|.+|+..|.++++..+.. ..++.++|.++.++++|.+|+..++++++++|+
T Consensus 312 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~ 376 (537)
T 3fp2_A 312 TYYHRGQMYFILQDYKNAKEDFQKAQSLNPEN---------------VYPYIQLACLLYKQGKFTESEAFFNETKLKFPT 376 (537)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 34456666777777777777777777753222 355677777777777777777777777777777
Q ss_pred Ccchhccccccccc
Q 011003 481 KGSGIHSDGRFRFG 494 (496)
Q Consensus 481 ~~Ka~~rrg~a~~~ 494 (496)
+..+++.+|.++..
T Consensus 377 ~~~~~~~l~~~~~~ 390 (537)
T 3fp2_A 377 LPEVPTFFAEILTD 390 (537)
T ss_dssp CTHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHH
Confidence 77777777766543
No 228
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.24 E-value=0.00015 Score=57.48 Aligned_cols=48 Identities=10% Similarity=0.025 Sum_probs=44.5
Q ss_pred HHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhcccccccccc
Q 011003 448 VACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
...+.++|.+++++++|.+|+..++++++++|++..+|+.+|.+++.+
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 51 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKL 51 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 567889999999999999999999999999999999999999988654
No 229
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=97.20 E-value=0.00015 Score=73.89 Aligned_cols=84 Identities=11% Similarity=-0.031 Sum_probs=63.3
Q ss_pred hHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhcc--CHHHHHHHHHHHhcccC
Q 011003 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK--DYKQAEKLCTKKCESSV 479 (496)
Q Consensus 402 ~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~--~~~~Ai~~~~~al~~dp 479 (496)
+...|..++..|+|.+|+..|.+++++.+...... ......+++|++.++++++ +|++|+.++++||+++|
T Consensus 97 ~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~-------~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p 169 (472)
T 4g1t_A 97 WGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPY-------RIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKP 169 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSS-------CCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHhHhccccc-------chhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCC
Confidence 34567788999999999999999999865432111 0112456778888877754 69999999999999999
Q ss_pred CCcchhccccccc
Q 011003 480 QKGSGIHSDGRFR 492 (496)
Q Consensus 480 ~~~Ka~~rrg~a~ 492 (496)
+|+.+++..|.++
T Consensus 170 ~~~~~~~~~~~~~ 182 (472)
T 4g1t_A 170 KNPEFTSGLAIAS 182 (472)
T ss_dssp TCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 9998888777654
No 230
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=97.19 E-value=0.00012 Score=74.54 Aligned_cols=85 Identities=14% Similarity=-0.011 Sum_probs=63.1
Q ss_pred hHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC--
Q 011003 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV-- 479 (496)
Q Consensus 402 ~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp-- 479 (496)
+...|..++..|+|++|+..|++|++++...... ..++.....|.|+|.+|..+|+|.+|+.++++++++.+
T Consensus 54 yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~------~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~ 127 (472)
T 4g1t_A 54 CNLLAYLKHLKGQNEAALECLRKAEELIQQEHAD------QAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKF 127 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGG------GCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCcc------ccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhc
Confidence 3456888899999999999999999985432110 00223367799999999999999999999999998754
Q ss_pred ------CCcchhccccccc
Q 011003 480 ------QKGSGIHSDGRFR 492 (496)
Q Consensus 480 ------~~~Ka~~rrg~a~ 492 (496)
....++..+|.++
T Consensus 128 ~~~~~~~~~~~~~~~g~~~ 146 (472)
T 4g1t_A 128 SSPYRIESPELDCEEGWTR 146 (472)
T ss_dssp CCSSCCCCHHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHH
Confidence 3344555555444
No 231
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=97.16 E-value=0.00047 Score=68.11 Aligned_cols=86 Identities=17% Similarity=0.074 Sum_probs=60.4
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..++..|+|.+|+..|.+++++.+.... ......++.|+|.+|.++++|.+|+..+++++++.
T Consensus 187 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 257 (406)
T 3sf4_A 187 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLA 257 (406)
T ss_dssp HHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCC---------cHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 345567788889999999999999999998654211 22335567777777777777777777777777766
Q ss_pred CCC------cchhcccccccc
Q 011003 479 VQK------GSGIHSDGRFRF 493 (496)
Q Consensus 479 p~~------~Ka~~rrg~a~~ 493 (496)
+.. ..+++..|.++.
T Consensus 258 ~~~~~~~~~~~~~~~la~~~~ 278 (406)
T 3sf4_A 258 RQLKDRAVEAQSCYSLGNTYT 278 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HhCcCchHHHHHHHHHHHHHH
Confidence 554 456666665554
No 232
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.11 E-value=0.0006 Score=69.19 Aligned_cols=76 Identities=12% Similarity=-0.055 Sum_probs=62.6
Q ss_pred HHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHh
Q 011003 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKC 475 (496)
Q Consensus 396 ~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 475 (496)
...+..+...|..+..+|+|++|+..|+++|...+.....+ .+.....++|+|..|..+|+|.+|+..+.+||
T Consensus 337 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al 409 (433)
T 3qww_A 337 VYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY-------SLNVASMWLKLGRLYMGLENKAAGEKALKKAI 409 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 34566667788889999999999999999999865322211 55668889999999999999999999999999
Q ss_pred ccc
Q 011003 476 ESS 478 (496)
Q Consensus 476 ~~d 478 (496)
++-
T Consensus 410 ~i~ 412 (433)
T 3qww_A 410 AIM 412 (433)
T ss_dssp HHH
T ss_pred HHH
Confidence 863
No 233
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.08 E-value=0.00024 Score=72.75 Aligned_cols=82 Identities=12% Similarity=0.145 Sum_probs=53.8
Q ss_pred HhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHh---ccCHHHHHHHHHHHhcccCC
Q 011003 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK---LKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 404 ~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k---l~~~~~Ai~~~~~al~~dp~ 480 (496)
..|..+++.|+|.+|+..|.++++..+...... ....++.++|.++++ ++++.+|+..++++++++|+
T Consensus 377 ~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~---------~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~ 447 (514)
T 2gw1_A 377 FFAEILTDKNDFDKALKQYDLAIELENKLDGIY---------VGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPR 447 (514)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCS---------SCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhhhccchHH---------HHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcc
Confidence 345555556666666666666655432221100 002267888888888 88888888888888888888
Q ss_pred Ccchhccccccccc
Q 011003 481 KGSGIHSDGRFRFG 494 (496)
Q Consensus 481 ~~Ka~~rrg~a~~~ 494 (496)
+..+++.+|.++..
T Consensus 448 ~~~~~~~la~~~~~ 461 (514)
T 2gw1_A 448 SEQAKIGLAQMKLQ 461 (514)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 88888888877654
No 234
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.07 E-value=0.00015 Score=69.31 Aligned_cols=95 Identities=9% Similarity=-0.069 Sum_probs=70.5
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccC--------------CCCChH-----HHHHHHHHHHHhhhHHHHHHHh
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD--------------TSFGDE-----EKKQAKALKVACNLNNAACKLK 460 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~--------------~~~~~~-----~~~~~~~~~~~~~~N~a~~~~k 460 (496)
..+...|..+.+.|++++|+..|.+++..-+.. ....+. .....++....++.|+|.+++.
T Consensus 152 ~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~ 231 (287)
T 3qou_A 152 EIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQ 231 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence 345568888999999999999999887643210 000100 0112234457789999999999
Q ss_pred ccCHHHHHHHHHHHhcccCCC--cchhccccccccc
Q 011003 461 LKDYKQAEKLCTKKCESSVQK--GSGIHSDGRFRFG 494 (496)
Q Consensus 461 l~~~~~Ai~~~~~al~~dp~~--~Ka~~rrg~a~~~ 494 (496)
+|++.+|+..+.++|+++|++ ..++.+.+.++..
T Consensus 232 ~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~ 267 (287)
T 3qou_A 232 VGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAA 267 (287)
T ss_dssp TTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhcccccccchHHHHHHHHHHH
Confidence 999999999999999999999 8888888777654
No 235
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.06 E-value=0.00057 Score=69.36 Aligned_cols=92 Identities=9% Similarity=-0.020 Sum_probs=69.5
Q ss_pred HHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHh
Q 011003 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKC 475 (496)
Q Consensus 396 ~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 475 (496)
+..+..+......+.++|+|++|+..|++++.........+ ++.....++|+|.+|..+|+|++|+..|.++|
T Consensus 284 ~~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~-------h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L 356 (429)
T 3qwp_A 284 WKEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDI-------NIYQLKVLDCAMDACINLGLLEEALFYGTRTM 356 (429)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTT-------SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCcc-------chHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 34455556666778889999999999999998754322211 45678899999999999999999999999999
Q ss_pred ccc-----CCC---cchhccccccccc
Q 011003 476 ESS-----VQK---GSGIHSDGRFRFG 494 (496)
Q Consensus 476 ~~d-----p~~---~Ka~~rrg~a~~~ 494 (496)
++. |++ ...|++.|.+|..
T Consensus 357 ~i~~~~lg~~Hp~~a~~l~nLa~~~~~ 383 (429)
T 3qwp_A 357 EPYRIFFPGSHPVRGVQVMKVGKLQLH 383 (429)
T ss_dssp HHHHHHSCSSCHHHHHHHHHHHHHHHH
T ss_pred HhHHHHcCCCChHHHHHHHHHHHHHHh
Confidence 763 444 4566777766654
No 236
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=97.05 E-value=0.00033 Score=73.82 Aligned_cols=78 Identities=8% Similarity=-0.034 Sum_probs=55.6
Q ss_pred hhHHhhhhhHhccc----------HHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhcc--CHHHHH
Q 011003 401 KKKEQGNTLFKAGK----------YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK--DYKQAE 468 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~----------y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~--~~~~Ai 468 (496)
.+.-++..+.+.++ |.+|+..|.++++. ++....+|.+|+.+..+++ +|.+|+
T Consensus 65 aW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~---------------~pK~y~aW~hR~w~l~~l~~~~~~~el 129 (567)
T 1dce_A 65 LWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV---------------NPKSYGTWHHRCWLLSRLPEPNWAREL 129 (567)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHTCSSCCHHHHH
T ss_pred HHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHcccccHHHHH
Confidence 33445566666666 99999999999987 3344667777777777777 567777
Q ss_pred HHHHHHhcccCCCcchhcccccccc
Q 011003 469 KLCTKKCESSVQKGSGIHSDGRFRF 493 (496)
Q Consensus 469 ~~~~~al~~dp~~~Ka~~rrg~a~~ 493 (496)
+.|+++|++||+|..||+.|+.++.
T Consensus 130 ~~~~k~l~~d~~N~~aW~~R~~~l~ 154 (567)
T 1dce_A 130 ELCARFLEADERNFHCWDYRRFVAA 154 (567)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhhccccccHHHHHHHHHH
Confidence 7777777777777777777765543
No 237
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.05 E-value=0.00042 Score=68.98 Aligned_cols=87 Identities=13% Similarity=0.185 Sum_probs=72.1
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc-
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES- 477 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~- 477 (496)
+..+...|..++..|+|.+|+..|.+++++..... -.+....++.++|.+|..+++|.+|+..+.+++++
T Consensus 86 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~---------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 156 (411)
T 4a1s_A 86 SAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMN---------DRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLA 156 (411)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT---------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcc---------CchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 44567788999999999999999999999854321 14566889999999999999999999999999998
Q ss_pred -----cCCCcchhccccccccc
Q 011003 478 -----SVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 478 -----dp~~~Ka~~rrg~a~~~ 494 (496)
.+....+++.+|.+|..
T Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~ 178 (411)
T 4a1s_A 157 RQLGDRLSEGRALYNLGNVYHA 178 (411)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHhhchHHHHHHHHHHHHHHHH
Confidence 56667788888877653
No 238
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.03 E-value=0.00023 Score=62.35 Aligned_cols=96 Identities=10% Similarity=-0.009 Sum_probs=69.8
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCC---------------CCh--H---HHHHHHHHHHHhhhHHHHH
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS---------------FGD--E---EKKQAKALKVACNLNNAAC 457 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~---------------~~~--~---~~~~~~~~~~~~~~N~a~~ 457 (496)
....+...|..+++.|++++|+..|.++++.-+ +.. ..+ . ...+..+....++.|+|.+
T Consensus 39 ~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~ 117 (176)
T 2r5s_A 39 RGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQ 117 (176)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 344566788888899999999999988876532 100 000 0 0011223346789999999
Q ss_pred HHhccCHHHHHHHHHHHhcccCCC--cchhccccccccc
Q 011003 458 KLKLKDYKQAEKLCTKKCESSVQK--GSGIHSDGRFRFG 494 (496)
Q Consensus 458 ~~kl~~~~~Ai~~~~~al~~dp~~--~Ka~~rrg~a~~~ 494 (496)
+.++|++.+|+..+.++|+++|++ ..+++..|.++..
T Consensus 118 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~ 156 (176)
T 2r5s_A 118 YNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSA 156 (176)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHH
Confidence 999999999999999999999986 5588888877654
No 239
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.02 E-value=0.00081 Score=64.09 Aligned_cols=85 Identities=7% Similarity=-0.123 Sum_probs=62.9
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc---
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES--- 477 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~--- 477 (496)
-+...|..++..++|.+|+..|.+|+++....... .....+++|+|.+|..+++|.+|+..+++||++
T Consensus 117 ~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~---------~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 187 (293)
T 3u3w_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV---------YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA 187 (293)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCT---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccH---------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 33456777778889999999999999864322111 134668999999999999999999999999942
Q ss_pred ----cCCCcchhccccccccc
Q 011003 478 ----SVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 478 ----dp~~~Ka~~rrg~a~~~ 494 (496)
.+....+|+..|.+|..
T Consensus 188 ~~~~~~~~~~~~~nlg~~y~~ 208 (293)
T 3u3w_A 188 LHDNEEFDVKVRYNHAKALYL 208 (293)
T ss_dssp SSCCHHHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHH
Confidence 33345677877777654
No 240
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.02 E-value=0.00082 Score=66.57 Aligned_cols=84 Identities=12% Similarity=0.019 Sum_probs=66.8
Q ss_pred hHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCC
Q 011003 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQK 481 (496)
Q Consensus 402 ~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~ 481 (496)
+.-+|..++..|+|.+|+..|.+|++++..... ......++.|+|.+|..++++..|+..+.+|+++.+.+
T Consensus 104 ~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 174 (378)
T 3q15_A 104 LFFRGMYEFDQKEYVEAIGYYREAEKELPFVSD---------DIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNH 174 (378)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCC---------hHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhC
Confidence 445788889999999999999999998754311 34567899999999999999999999999999886542
Q ss_pred -------cchhccccccccc
Q 011003 482 -------GSGIHSDGRFRFG 494 (496)
Q Consensus 482 -------~Ka~~rrg~a~~~ 494 (496)
+.+++..|.++..
T Consensus 175 ~~~~~~~~~~~~~lg~~y~~ 194 (378)
T 3q15_A 175 PLYSIRTIQSLFVIAGNYDD 194 (378)
T ss_dssp TTCHHHHHHHHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHHH
Confidence 3456666665543
No 241
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.00 E-value=0.00039 Score=52.79 Aligned_cols=49 Identities=16% Similarity=0.121 Sum_probs=44.8
Q ss_pred HHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhcccccccccc
Q 011003 447 KVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 447 ~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
...++.++|.+++++++|.+|+..++++++++|++..+++.+|.++..+
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 56 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQ 56 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 4677899999999999999999999999999999999999999887643
No 242
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=96.97 E-value=0.0015 Score=62.21 Aligned_cols=82 Identities=9% Similarity=-0.079 Sum_probs=57.4
Q ss_pred hhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHh---cccCCC
Q 011003 405 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKC---ESSVQK 481 (496)
Q Consensus 405 ~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al---~~dp~~ 481 (496)
.|..+...|+|.+|+..|.+|++....... ......+++|+|.+|..+++|.+|+..+++|+ +..|++
T Consensus 121 ~~~~~~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~ 191 (293)
T 2qfc_A 121 VAAYVLKKVDYEYCILELKKLLNQQLTGID---------VYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN 191 (293)
T ss_dssp HHHHHHTSSCHHHHHHHHHHHHTTCCCSSC---------TTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHhcCCc---------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcc
Confidence 444455666777777777777765432111 11236689999999999999999999999999 445553
Q ss_pred c----chhcccccccccc
Q 011003 482 G----SGIHSDGRFRFGR 495 (496)
Q Consensus 482 ~----Ka~~rrg~a~~~l 495 (496)
. .+|+..|.+|..+
T Consensus 192 ~~~~~~~~~nlg~~y~~~ 209 (293)
T 2qfc_A 192 EEFDVKVRYNHAKALYLD 209 (293)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred ccchHHHHHhHHHHHHHH
Confidence 2 6888888777543
No 243
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.93 E-value=0.0012 Score=61.75 Aligned_cols=44 Identities=14% Similarity=0.071 Sum_probs=32.5
Q ss_pred HHhhhHHHHHHHh----ccCHHHHHHHHHHHhcccCCCcchhcccccccc
Q 011003 448 VACNLNNAACKLK----LKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRF 493 (496)
Q Consensus 448 ~~~~~N~a~~~~k----l~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~ 493 (496)
..++.|++.+|.. .+++.+|+..++++++++ +..+++..|.+|.
T Consensus 74 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~ 121 (273)
T 1ouv_A 74 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYH 121 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHH
Confidence 5567777777777 777888888888777763 6777777776664
No 244
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=96.92 E-value=0.00093 Score=63.60 Aligned_cols=86 Identities=17% Similarity=0.074 Sum_probs=58.6
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..++..|+|.+|+..|.+++++...... ......++.|+|.++.+++++.+|+..+++++++.
T Consensus 183 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 253 (338)
T 3ro2_A 183 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLA 253 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC---------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 345566788889999999999999999988543211 23335566777777777777777777777777665
Q ss_pred CCC------cchhcccccccc
Q 011003 479 VQK------GSGIHSDGRFRF 493 (496)
Q Consensus 479 p~~------~Ka~~rrg~a~~ 493 (496)
+.. ..+++..|.++.
T Consensus 254 ~~~~~~~~~~~~~~~la~~~~ 274 (338)
T 3ro2_A 254 RQLKDRAVEAQSCYSLGNTYT 274 (338)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HhhcchhHHHHHHHHHHHHHH
Confidence 544 445555555543
No 245
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=96.89 E-value=0.0012 Score=68.12 Aligned_cols=75 Identities=9% Similarity=-0.066 Sum_probs=61.8
Q ss_pred HHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHh
Q 011003 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKC 475 (496)
Q Consensus 396 ~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 475 (496)
...+..+...|..+..+|+|++|+..|.++|.........+ .+.....++|+|..|..+|+|.+|+..+.+||
T Consensus 348 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al 420 (490)
T 3n71_A 348 LYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN-------NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAY 420 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC-------CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 34566666778888899999999999999999864322211 55668889999999999999999999999999
Q ss_pred cc
Q 011003 476 ES 477 (496)
Q Consensus 476 ~~ 477 (496)
++
T Consensus 421 ~i 422 (490)
T 3n71_A 421 AI 422 (490)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 246
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.82 E-value=0.0013 Score=63.26 Aligned_cols=63 Identities=11% Similarity=0.121 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhh-hhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcc-hhccccccc
Q 011003 415 YARASKRYEKAVK-YIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGS-GIHSDGRFR 492 (496)
Q Consensus 415 y~~A~~~Y~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~K-a~~rrg~a~ 492 (496)
+.+|+..|.+|++ +-+.. ..+|.+++..+.+++++.+|+..++++|+++|++.. +|+..|.++
T Consensus 80 ~~~A~~~~~rAl~~~~p~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 144 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKN---------------MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFA 144 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHH
Confidence 4999999999999 43322 456666666666666777777777777766666665 666555443
No 247
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.81 E-value=0.0024 Score=52.47 Aligned_cols=41 Identities=17% Similarity=0.149 Sum_probs=37.1
Q ss_pred HHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhc
Q 011003 446 LKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIH 486 (496)
Q Consensus 446 ~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~ 486 (496)
..-.|+..+|..|+|+++|.+|+..|+.+|+++|+|..|.-
T Consensus 72 ~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~ 112 (126)
T 1nzn_A 72 EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKE 112 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHH
Confidence 45678899999999999999999999999999999987653
No 248
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=96.80 E-value=0.0021 Score=56.69 Aligned_cols=73 Identities=14% Similarity=0.051 Sum_probs=58.2
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.+..+...|..++..|+|.+|+..|.+|++++...... ......++.|+|.++..+++|.+|+..+.+++++
T Consensus 65 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 136 (203)
T 3gw4_A 65 EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED--------PLAASANAYEVATVALHFGDLAGARQEYEKSLVY 136 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC--------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc--------HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 45556678888999999999999999999986532110 2245678899999999999999999999999876
Q ss_pred c
Q 011003 478 S 478 (496)
Q Consensus 478 d 478 (496)
.
T Consensus 137 ~ 137 (203)
T 3gw4_A 137 A 137 (203)
T ss_dssp H
T ss_pred H
Confidence 4
No 249
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=96.79 E-value=0.00095 Score=63.34 Aligned_cols=82 Identities=15% Similarity=0.058 Sum_probs=61.3
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc--
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS-- 478 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d-- 478 (496)
..-..|..+++.++|.+|+..|+++++.-. +.....++.|++.++..+|+|.+|+..+++++...
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d-------------~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~ 203 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPD-------------KFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAG 203 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSC-------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCC-------------cccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCC
Confidence 445677788899999999999987766410 11234578888888888888888888888888554
Q ss_pred CC-Ccchhcccccccccc
Q 011003 479 VQ-KGSGIHSDGRFRFGR 495 (496)
Q Consensus 479 p~-~~Ka~~rrg~a~~~l 495 (496)
|. ...++|++|.|++.+
T Consensus 204 P~~~~da~~~~glaL~~l 221 (282)
T 4f3v_A 204 EACARAIAWYLAMARRSQ 221 (282)
T ss_dssp TTTHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHc
Confidence 55 567888888887654
No 250
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.78 E-value=0.0016 Score=65.99 Aligned_cols=77 Identities=9% Similarity=-0.095 Sum_probs=64.0
Q ss_pred HHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHH
Q 011003 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTK 473 (496)
Q Consensus 394 e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~ 473 (496)
+....+..+...|..+..+|+|++|+..|.++|.......... .+.....++|+|..|..+|+|.+|+..+.+
T Consensus 324 ~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~ 396 (429)
T 3qwp_A 324 INIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS-------HPVRGVQVMKVGKLQLHQGMFPQAMKNLRL 396 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC-------ChHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 3456677777888889999999999999999999864322211 566788999999999999999999999999
Q ss_pred Hhcc
Q 011003 474 KCES 477 (496)
Q Consensus 474 al~~ 477 (496)
||++
T Consensus 397 Al~i 400 (429)
T 3qwp_A 397 AFDI 400 (429)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9976
No 251
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=96.77 E-value=0.0016 Score=68.20 Aligned_cols=92 Identities=11% Similarity=-0.072 Sum_probs=50.0
Q ss_pred hHHhhhhhHhcccHHHHHHHHHHHhhhhccCCC-------------CChHHHHHH------HHHHHHhhhHHHHHHHhcc
Q 011003 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS-------------FGDEEKKQA------KALKVACNLNNAACKLKLK 462 (496)
Q Consensus 402 ~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~-------------~~~~~~~~~------~~~~~~~~~N~a~~~~kl~ 462 (496)
+...|..+++.|++++|+..|.++++..+.+.. ..++-...+ .+....++++++.+|.+.|
T Consensus 376 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 455 (597)
T 2xpi_A 376 WLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLG 455 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcC
Confidence 344667777888888888888888775322100 000000000 1112334556666666666
Q ss_pred CHHHHHHHHHHHhcccCCCcchhcccccccc
Q 011003 463 DYKQAEKLCTKKCESSVQKGSGIHSDGRFRF 493 (496)
Q Consensus 463 ~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~ 493 (496)
++.+|+..++++++++|+++.+|+.+|.+|.
T Consensus 456 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 486 (597)
T 2xpi_A 456 NILLANEYLQSSYALFQYDPLLLNELGVVAF 486 (597)
T ss_dssp CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 6666666666666666666666665555543
No 252
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.76 E-value=0.0018 Score=50.40 Aligned_cols=66 Identities=15% Similarity=0.046 Sum_probs=55.7
Q ss_pred hhHHhhhhhHhccc---HHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 401 KKKEQGNTLFKAGK---YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~---y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.+-..|..+|-.++ ..+|...+.+||++ ++.....+..++..+++.++|.+|+....++|+.
T Consensus 8 ~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~---------------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 8 QLAAKATTLYYLHKQAMTDEVSLLLEQALQL---------------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp HHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH---------------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 44556777765444 79999999999998 4445888889999999999999999999999999
Q ss_pred cCCC
Q 011003 478 SVQK 481 (496)
Q Consensus 478 dp~~ 481 (496)
+|.+
T Consensus 73 ~p~~ 76 (93)
T 3bee_A 73 NDPN 76 (93)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 9983
No 253
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=96.76 E-value=0.00077 Score=71.04 Aligned_cols=88 Identities=8% Similarity=-0.097 Sum_probs=71.4
Q ss_pred HHHHHHHhhhHHhhhhhHhcccH-HHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccC--------
Q 011003 393 EEKIEAAGKKKEQGNTLFKAGKY-ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKD-------- 463 (496)
Q Consensus 393 ~e~~~~a~~~k~~Gn~~fk~~~y-~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~-------- 463 (496)
..|++.-.........+.+.++| ++|+..|.+++.+ ++....+|++|+.+..++++
T Consensus 22 ~~k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~---------------nP~~~taW~~R~~~l~~l~~~~~~~~~~ 86 (567)
T 1dce_A 22 EQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGA---------------NPDFATLWNCRREVLQHLETEKSPEESA 86 (567)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH---------------CchhHHHHHHHHHHHHhcccccchhhhh
Confidence 34555555555555555666665 6779999999998 55558999999999999999
Q ss_pred --HHHHHHHHHHHhcccCCCcchhcccccccccc
Q 011003 464 --YKQAEKLCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 464 --~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
+.+|++.+++||+.+|+|..||+.|+.++..+
T Consensus 87 ~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l 120 (567)
T 1dce_A 87 ALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRL 120 (567)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999876543
No 254
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.72 E-value=0.00054 Score=53.30 Aligned_cols=45 Identities=9% Similarity=-0.083 Sum_probs=41.3
Q ss_pred hhHHHHHHHhccCHHHHHHHHHHHhcccCCCcc-hhcccccccccc
Q 011003 451 NLNNAACKLKLKDYKQAEKLCTKKCESSVQKGS-GIHSDGRFRFGR 495 (496)
Q Consensus 451 ~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~K-a~~rrg~a~~~l 495 (496)
..++|.++++.++|.+|+..++++++++|++.. +|+.+|.+++.+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~ 48 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKL 48 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999999 999999887643
No 255
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=96.72 E-value=0.0015 Score=62.51 Aligned_cols=68 Identities=9% Similarity=0.015 Sum_probs=55.2
Q ss_pred hHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHH-HHHHHHHHhcccCC
Q 011003 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQ-AEKLCTKKCESSVQ 480 (496)
Q Consensus 402 ~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~-Ai~~~~~al~~dp~ 480 (496)
+...|..+.+.|+|.+|...|.+|++.- +....++.|++.++..+|++.+ +...++++++++|+
T Consensus 203 ~~~la~~~~~~g~~~eA~~~l~~al~~~---------------p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~ 267 (291)
T 3mkr_A 203 LNGQAACHMAQGRWEAAEGVLQEALDKD---------------SGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRS 267 (291)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC---------------CCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCC
Confidence 3456777778888888888888888873 3347789999999999999987 56788999999999
Q ss_pred Ccch
Q 011003 481 KGSG 484 (496)
Q Consensus 481 ~~Ka 484 (496)
++.+
T Consensus 268 ~~~~ 271 (291)
T 3mkr_A 268 HPFI 271 (291)
T ss_dssp CHHH
T ss_pred ChHH
Confidence 9754
No 256
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=96.68 E-value=0.002 Score=58.28 Aligned_cols=76 Identities=14% Similarity=0.011 Sum_probs=59.1
Q ss_pred HhhhhhHh----cccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHh----ccCHHHHHHHHHHHh
Q 011003 404 EQGNTLFK----AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK----LKDYKQAEKLCTKKC 475 (496)
Q Consensus 404 ~~Gn~~fk----~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k----l~~~~~Ai~~~~~al 475 (496)
..|..++. .+++.+|+..|++|++.-+. .....++.|++.+|.. .+++.+|+..+.+|+
T Consensus 90 ~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~-------------~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~ 156 (212)
T 3rjv_A 90 VLARVLVNRQAGATDVAHAITLLQDAARDSES-------------DAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSS 156 (212)
T ss_dssp HHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTS-------------HHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCccCHHHHHHHHHHHHHcCCC-------------cchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 34555555 67888888888888875110 0236788999999999 899999999999999
Q ss_pred cccCCCcchhcccccccc
Q 011003 476 ESSVQKGSGIHSDGRFRF 493 (496)
Q Consensus 476 ~~dp~~~Ka~~rrg~a~~ 493 (496)
++ +.+..|+|..|.+|.
T Consensus 157 ~~-~~~~~a~~~Lg~~y~ 173 (212)
T 3rjv_A 157 SL-SRTGYAEYWAGMMFQ 173 (212)
T ss_dssp HT-SCTTHHHHHHHHHHH
T ss_pred Hc-CCCHHHHHHHHHHHH
Confidence 98 778889999988774
No 257
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.67 E-value=0.0019 Score=53.24 Aligned_cols=41 Identities=15% Similarity=0.087 Sum_probs=36.9
Q ss_pred HHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhc
Q 011003 446 LKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIH 486 (496)
Q Consensus 446 ~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~ 486 (496)
..-.|+..+|.++.|+|+|.+|+.+|+.+|+++|+|..|.-
T Consensus 76 ~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~ 116 (134)
T 3o48_A 76 RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 116 (134)
T ss_dssp GHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHH
Confidence 45778889999999999999999999999999999987653
No 258
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=96.63 E-value=0.0014 Score=63.13 Aligned_cols=68 Identities=13% Similarity=0.021 Sum_probs=60.4
Q ss_pred HhcccH-HHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhcc--CHHHHHHHHHHHhcccCCCcchhc
Q 011003 410 FKAGKY-ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK--DYKQAEKLCTKKCESSVQKGSGIH 486 (496)
Q Consensus 410 fk~~~y-~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~--~~~~Ai~~~~~al~~dp~~~Ka~~ 486 (496)
.+++.| ++|+..+.++|.+ ++....++++|..+...++ ++.+++..++++|.++|+|..+|+
T Consensus 43 ~~~~e~s~~aL~~t~~~L~~---------------nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~ 107 (306)
T 3dra_A 43 MKAEEYSERALHITELGINE---------------LASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWN 107 (306)
T ss_dssp HHTTCCSHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHH---------------CcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHH
Confidence 344444 6899999999998 4555899999999999999 999999999999999999999999
Q ss_pred cccccc
Q 011003 487 SDGRFR 492 (496)
Q Consensus 487 rrg~a~ 492 (496)
.|+.++
T Consensus 108 ~R~~iL 113 (306)
T 3dra_A 108 YRQLII 113 (306)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998877
No 259
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=96.60 E-value=0.00095 Score=64.44 Aligned_cols=95 Identities=8% Similarity=-0.153 Sum_probs=63.5
Q ss_pred hhhHHhhhhhHhcc--cHHHHHHHHHHHhhhhccC-----------------C---CCChHHH------HHHHHHHHHhh
Q 011003 400 GKKKEQGNTLFKAG--KYARASKRYEKAVKYIEYD-----------------T---SFGDEEK------KQAKALKVACN 451 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~--~y~~A~~~Y~~al~~~~~~-----------------~---~~~~~~~------~~~~~~~~~~~ 451 (496)
..+.-+|..+...+ ++.+|+..+.++|..-+.. . ...+++. .+.++....++
T Consensus 68 taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW 147 (306)
T 3dra_A 68 TIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVW 147 (306)
T ss_dssp HHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 34456777777777 9999999999999863221 0 0111221 12333446677
Q ss_pred hHHHHHHHhccCHH--HHHHHHHHHhcccCCCcchhccccccccc
Q 011003 452 LNNAACKLKLKDYK--QAEKLCTKKCESSVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 452 ~N~a~~~~kl~~~~--~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~ 494 (496)
++|..+..+++.|. ++++.|+++|+.||.|.-||..|+.++..
T Consensus 148 ~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~ 192 (306)
T 3dra_A 148 SYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFS 192 (306)
T ss_dssp HHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 77777777777777 78888888888888888888777766543
No 260
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.57 E-value=0.0023 Score=59.85 Aligned_cols=45 Identities=20% Similarity=0.254 Sum_probs=37.1
Q ss_pred HHhhhHHHHHHHh----ccCHHHHHHHHHHHhcccCCCcchhccccccccc
Q 011003 448 VACNLNNAACKLK----LKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 448 ~~~~~N~a~~~~k----l~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~ 494 (496)
..++.|++.+|.+ .+++.+|+..++++++++ +..++++.|.+|..
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 158 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDA 158 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHc
Confidence 5678889999998 899999999999998875 67888888877653
No 261
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=96.37 E-value=0.0026 Score=57.50 Aligned_cols=96 Identities=15% Similarity=0.035 Sum_probs=66.9
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhc-----------cCCCC--ChHHH-----HHHHHHHHHhhhHHHHHHHh
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIE-----------YDTSF--GDEEK-----KQAKALKVACNLNNAACKLK 460 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~-----------~~~~~--~~~~~-----~~~~~~~~~~~~N~a~~~~k 460 (496)
+......|..++..+++.+|+..|++|++.-. ..... +.++- ..++.-...++.|++.+|+.
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~ 97 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVN 97 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHc
Confidence 34555677778888999999999999887411 00111 11111 12233346678899999988
Q ss_pred ----ccCHHHHHHHHHHHhcccC--CCcchhccccccccc
Q 011003 461 ----LKDYKQAEKLCTKKCESSV--QKGSGIHSDGRFRFG 494 (496)
Q Consensus 461 ----l~~~~~Ai~~~~~al~~dp--~~~Ka~~rrg~a~~~ 494 (496)
.+++.+|+..+.+|++..+ +++.|++..|.+|..
T Consensus 98 g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 98 RQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp GGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 8899999999999999887 458999998887754
No 262
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.36 E-value=0.0032 Score=52.58 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=35.5
Q ss_pred HHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchh
Q 011003 447 KVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGI 485 (496)
Q Consensus 447 ~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~ 485 (496)
+-.|+..+|.+++|+++|.+|+.+|+.+|+++|+|..|.
T Consensus 76 ~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~ 114 (144)
T 1y8m_A 76 RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 114 (144)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHH
T ss_pred hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHH
Confidence 466888999999999999999999999999999997654
No 263
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.28 E-value=0.0027 Score=60.93 Aligned_cols=68 Identities=10% Similarity=0.096 Sum_probs=37.4
Q ss_pred HhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcc
Q 011003 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGS 483 (496)
Q Consensus 404 ~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~K 483 (496)
..|+.+.+.|++.+|...|++|++.-+.... .+|.|++.++.+++++.+|+..+++|++++|.+..
T Consensus 104 ~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~--------------~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 169 (308)
T 2ond_A 104 AYADYEESRMKYEKVHSIYNRLLAIEDIDPT--------------LVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHH 169 (308)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTSSSSCTH--------------HHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHhccccCcc--------------HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH
Confidence 4555666788888999999988886332210 13444444444444444444444444444444433
Q ss_pred hh
Q 011003 484 GI 485 (496)
Q Consensus 484 a~ 485 (496)
+|
T Consensus 170 ~~ 171 (308)
T 2ond_A 170 VY 171 (308)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 264
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=96.23 E-value=0.0021 Score=62.58 Aligned_cols=91 Identities=8% Similarity=-0.053 Sum_probs=63.3
Q ss_pred HHhhhhhHhcccHH-HHHHHHHHHhhhhccCCC---------------CC--------hHHH------HHHHHHHHHhhh
Q 011003 403 KEQGNTLFKAGKYA-RASKRYEKAVKYIEYDTS---------------FG--------DEEK------KQAKALKVACNL 452 (496)
Q Consensus 403 k~~Gn~~fk~~~y~-~A~~~Y~~al~~~~~~~~---------------~~--------~~~~------~~~~~~~~~~~~ 452 (496)
.+.-....+.|+|. +|+..+.++|.+-+.... .+ +++. ...++....+++
T Consensus 33 ~~~~~~~~~~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~ 112 (331)
T 3dss_A 33 TQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWH 112 (331)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 33444444677776 799999999986432100 00 0111 122344567788
Q ss_pred HHHHHHHhccC--HHHHHHHHHHHhcccCCCcchhcccccccc
Q 011003 453 NNAACKLKLKD--YKQAEKLCTKKCESSVQKGSGIHSDGRFRF 493 (496)
Q Consensus 453 N~a~~~~kl~~--~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~ 493 (496)
+|..+..+++. |.+++..|+++|++||.|..||+.|+.++.
T Consensus 113 hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~ 155 (331)
T 3dss_A 113 HRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAA 155 (331)
T ss_dssp HHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 99999999999 889999999999999999999998886654
No 265
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=96.20 E-value=0.0021 Score=63.02 Aligned_cols=46 Identities=2% Similarity=-0.240 Sum_probs=32.7
Q ss_pred HHHhhhHHHHHHHhc-c-CHHHHHHHHHHHhcccCCCcchhccccccc
Q 011003 447 KVACNLNNAACKLKL-K-DYKQAEKLCTKKCESSVQKGSGIHSDGRFR 492 (496)
Q Consensus 447 ~~~~~~N~a~~~~kl-~-~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~ 492 (496)
...++++|..|..++ + ++.+++..|+++|++||.|..||+.|+.++
T Consensus 122 ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl 169 (349)
T 3q7a_A 122 SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLY 169 (349)
T ss_dssp CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 366677777777776 6 677777777777777777777777666544
No 266
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=96.12 E-value=0.0029 Score=61.56 Aligned_cols=80 Identities=8% Similarity=-0.107 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHhhhhccC--------------CC-CChHHH------HHHHHHHHHhhhHHHHHHHhccC-HHHHHHHHH
Q 011003 415 YARASKRYEKAVKYIEYD--------------TS-FGDEEK------KQAKALKVACNLNNAACKLKLKD-YKQAEKLCT 472 (496)
Q Consensus 415 y~~A~~~Y~~al~~~~~~--------------~~-~~~~~~------~~~~~~~~~~~~N~a~~~~kl~~-~~~Ai~~~~ 472 (496)
+.+++..+.+++..-+.+ .. .-+++. .+.++....++++|..+..+++. +.+++++++
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~ 169 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTD 169 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHH
Confidence 778888888888753211 11 011222 23445557889999999999999 699999999
Q ss_pred HHhcccCCCcchhccccccccc
Q 011003 473 KKCESSVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 473 ~al~~dp~~~Ka~~rrg~a~~~ 494 (496)
++|+.+|+|.-||+.|+.++..
T Consensus 170 ~~I~~~p~N~SAW~~R~~ll~~ 191 (331)
T 3dss_A 170 SLITRNFSNYSSWHYRSCLLPQ 191 (331)
T ss_dssp HHHHHCSCCHHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHH
Confidence 9999999999999999877654
No 267
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.05 E-value=0.017 Score=49.64 Aligned_cols=76 Identities=16% Similarity=0.156 Sum_probs=50.6
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCCh--------HHHH-H-HHHHHHHhhhHHHHHHHhccCHHHHH
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD--------EEKK-Q-AKALKVACNLNNAACKLKLKDYKQAE 468 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~--------~~~~-~-~~~~~~~~~~N~a~~~~kl~~~~~Ai 468 (496)
+..+---|+.+|.+++|.+|...|++||.....-..... .... . -......+...+|.||++++++.+||
T Consensus 63 ~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai 142 (167)
T 3ffl_A 63 YQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAI 142 (167)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHH
Confidence 344556799999999999999999999987542211100 0000 0 00112356677999999999999999
Q ss_pred HHHHHH
Q 011003 469 KLCTKK 474 (496)
Q Consensus 469 ~~~~~a 474 (496)
...+.+
T Consensus 143 ~~Le~I 148 (167)
T 3ffl_A 143 AILDGI 148 (167)
T ss_dssp HHHHTS
T ss_pred HHHhcC
Confidence 986653
No 268
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=95.96 E-value=0.0046 Score=60.50 Aligned_cols=68 Identities=12% Similarity=-0.031 Sum_probs=59.9
Q ss_pred cccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhcc-CHHHHHHHHHHHhcccCCCcchhccccc
Q 011003 412 AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK-DYKQAEKLCTKKCESSVQKGSGIHSDGR 490 (496)
Q Consensus 412 ~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~-~~~~Ai~~~~~al~~dp~~~Ka~~rrg~ 490 (496)
.+...+|+..+.++|.+ ++....++++|..+...++ .+.+++..++++|..+|+|..||+-|+.
T Consensus 67 ~e~se~AL~lt~~~L~~---------------nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~w 131 (349)
T 3q7a_A 67 EEKSERALELTEIIVRM---------------NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLL 131 (349)
T ss_dssp TCCSHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHh---------------CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34557899999999998 4455899999999999999 5999999999999999999999999987
Q ss_pred cccc
Q 011003 491 FRFG 494 (496)
Q Consensus 491 a~~~ 494 (496)
++..
T Consensus 132 lL~~ 135 (349)
T 3q7a_A 132 LLDR 135 (349)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 269
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=95.91 E-value=0.0098 Score=58.26 Aligned_cols=72 Identities=18% Similarity=0.039 Sum_probs=54.2
Q ss_pred hHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 402 ~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
+...|..++..|+|.+|+..|.++++......... .+....++.|++.++..+|++.+|+..+.+++++.+.
T Consensus 96 ~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 96 LIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQ-------LPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTT-------STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhcccc-------CcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 34567778889999999999999988754221100 0234667888999999999999999999999988765
No 270
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=95.81 E-value=0.0095 Score=58.36 Aligned_cols=86 Identities=7% Similarity=-0.034 Sum_probs=63.6
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
+..+...|..++..|+|.+|...|.+++.+...... ......+++|++.++..+|+|.+|+..+++++++.
T Consensus 53 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~ 123 (373)
T 1hz4_A 53 IVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDV---------WHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLI 123 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCc---------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 344566778888899999999999999987543211 22346678999999999999999999999999875
Q ss_pred C--------CCcchhcccccccc
Q 011003 479 V--------QKGSGIHSDGRFRF 493 (496)
Q Consensus 479 p--------~~~Ka~~rrg~a~~ 493 (496)
+ ....+++..|.++.
T Consensus 124 ~~~~~~~~~~~~~~~~~la~~~~ 146 (373)
T 1hz4_A 124 NEQHLEQLPMHEFLVRIRAQLLW 146 (373)
T ss_dssp HHTTCTTSTHHHHHHHHHHHHHH
T ss_pred HHhccccCcHHHHHHHHHHHHHH
Confidence 3 23345555555543
No 271
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.80 E-value=0.0076 Score=50.43 Aligned_cols=69 Identities=13% Similarity=-0.023 Sum_probs=40.7
Q ss_pred hhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHh----ccCHHHHHHHHHHHhcccCC
Q 011003 405 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK----LKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 405 ~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k----l~~~~~Ai~~~~~al~~dp~ 480 (496)
.|..++..+.+.+|+..|++|.+.= ....+.|++.+|+. .+++.+|+..+++|.+. .
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g-----------------~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g 91 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELN-----------------SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--N 91 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTT-----------------CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--T
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCC-----------------CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--C
Confidence 3444455566666777777777641 14455566666666 56666666666666554 4
Q ss_pred Ccchhccccccc
Q 011003 481 KGSGIHSDGRFR 492 (496)
Q Consensus 481 ~~Ka~~rrg~a~ 492 (496)
++.|+++.|.+|
T Consensus 92 ~~~a~~~Lg~~y 103 (138)
T 1klx_A 92 DQDGCLILGYKQ 103 (138)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 555665555544
No 272
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=95.63 E-value=0.014 Score=55.25 Aligned_cols=72 Identities=11% Similarity=-0.050 Sum_probs=58.8
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHH-HHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKAL-KVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~-~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..--.|..+-..|++.+|+..|.+++.-- . .+. ....+.|++.|+.++|+..+|...+++++..+|
T Consensus 173 a~~~LG~al~~LG~~~eAl~~l~~a~~g~-~------------~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P 239 (282)
T 4f3v_A 173 AGVAHGVAAANLALFTEAERRLTEANDSP-A------------GEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHP 239 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTST-T------------TTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHhcCC-C------------CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 44556888889999999999999998531 0 011 466789999999999999999999999999999
Q ss_pred CCcchhc
Q 011003 480 QKGSGIH 486 (496)
Q Consensus 480 ~~~Ka~~ 486 (496)
+ .+++.
T Consensus 240 ~-~~~~~ 245 (282)
T 4f3v_A 240 E-PKVAA 245 (282)
T ss_dssp C-HHHHH
T ss_pred c-HHHHH
Confidence 8 66544
No 273
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.50 E-value=0.013 Score=58.50 Aligned_cols=83 Identities=12% Similarity=0.108 Sum_probs=61.0
Q ss_pred hHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCCh--HHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD--EEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 402 ~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~--~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
..++|..+++.|+|.+|++.|.++++..+....... ............++.|++.+|.++|+|++|++...+++.+.+
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~ 86 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMM 86 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 446788899999999999999999987654322110 000111233456788999999999999999999999998877
Q ss_pred CCcch
Q 011003 480 QKGSG 484 (496)
Q Consensus 480 ~~~Ka 484 (496)
...++
T Consensus 87 ~~~~~ 91 (434)
T 4b4t_Q 87 QFAKS 91 (434)
T ss_dssp TSCHH
T ss_pred Hccch
Confidence 65554
No 274
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.33 E-value=0.032 Score=46.50 Aligned_cols=69 Identities=19% Similarity=0.094 Sum_probs=55.2
Q ss_pred hHHhhhhhHh----cccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHh----ccCHHHHHHHHHH
Q 011003 402 KKEQGNTLFK----AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK----LKDYKQAEKLCTK 473 (496)
Q Consensus 402 ~k~~Gn~~fk----~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k----l~~~~~Ai~~~~~ 473 (496)
....|..++. .+++.+|+..|++|.+. . ....+.|++.+|.. .+++.+|+..+.+
T Consensus 60 ~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g---------------~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~ 122 (138)
T 1klx_A 60 CRFLGDFYENGKYVKKDLRKAAQYYSKACGL--N---------------DQDGCLILGYKQYAGKGVVKNEKQAVKTFEK 122 (138)
T ss_dssp HHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--T---------------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--C---------------CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHH
Confidence 3445556666 78999999999999875 1 16678999999999 9999999999999
Q ss_pred HhcccCCCcchhcccc
Q 011003 474 KCESSVQKGSGIHSDG 489 (496)
Q Consensus 474 al~~dp~~~Ka~~rrg 489 (496)
|++. .+..|.++.+
T Consensus 123 Aa~~--g~~~A~~~l~ 136 (138)
T 1klx_A 123 ACRL--GSEDACGILN 136 (138)
T ss_dssp HHHT--TCHHHHHHC-
T ss_pred HHHC--CCHHHHHHHh
Confidence 9988 4666666554
No 275
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=94.52 E-value=0.14 Score=43.94 Aligned_cols=70 Identities=11% Similarity=0.056 Sum_probs=59.0
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCC-ChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-GDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~-~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.+.++...++..+.|..|+-.++.++.+.+.+... . ......++..+|.+++..++|.+|+..+.+||++
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~s-------p~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~ 92 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFS-------PPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQ 92 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSC-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccccc-------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 45678888999999999999999999987554432 2 4456788999999999999999999999999865
No 276
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.46 E-value=0.12 Score=51.29 Aligned_cols=95 Identities=12% Similarity=-0.042 Sum_probs=75.1
Q ss_pred HHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccC-------CCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHH
Q 011003 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD-------TSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKL 470 (496)
Q Consensus 398 ~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~-------~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~ 470 (496)
...++-.+|......++...|+..|.+|+.++... ..+-..+...+......+...++.+++.++++.+|+..
T Consensus 114 ~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~ 193 (388)
T 2ff4_A 114 RFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAE 193 (388)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 34555666777777899999999999999986432 12223556788889999999999999999999999999
Q ss_pred HHHHhcccCCCcchhccccccc
Q 011003 471 CTKKCESSVQKGSGIHSDGRFR 492 (496)
Q Consensus 471 ~~~al~~dp~~~Ka~~rrg~a~ 492 (496)
|..++..+|-+..+|...-+||
T Consensus 194 l~~~~~~~P~~E~~~~~lm~al 215 (388)
T 2ff4_A 194 LEALTFEHPYREPLWTQLITAY 215 (388)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHH
Confidence 9999999999876665554444
No 277
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.45 E-value=0.026 Score=56.32 Aligned_cols=70 Identities=10% Similarity=0.071 Sum_probs=57.7
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
-....|+.++..|+|.+|+..+++++..+..... .+....++++++.+|+.+++|.+|...+++++.+.+
T Consensus 137 ~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 137 LSIKLATLHYQKKQYKDSLALINDLLREFKKLDD---------KPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSC---------STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccChHHHHHHHHHHHHHHHhccc---------chhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 3456788899999999999999999987654321 234577899999999999999999999999998754
No 278
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=94.38 E-value=0.044 Score=56.65 Aligned_cols=66 Identities=12% Similarity=0.140 Sum_probs=48.5
Q ss_pred cccHH-------HHHHHHHHHhh-hhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCc-
Q 011003 412 AGKYA-------RASKRYEKAVK-YIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKG- 482 (496)
Q Consensus 412 ~~~y~-------~A~~~Y~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~- 482 (496)
.|++. +|+..|.+|++ ..+.. ..++.+++..+.+++++.+|+..++++|+++|++.
T Consensus 292 ~g~~~~a~~~~~~A~~~~~~Al~~~~p~~---------------~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 356 (530)
T 2ooe_A 292 KGDMNNAKLFSDEAANIYERAISTLLKKN---------------MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPT 356 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTTTCSSC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHH
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCch
Confidence 68876 89999999997 54432 56777777777778888888888888888777764
Q ss_pred chhccccccc
Q 011003 483 SGIHSDGRFR 492 (496)
Q Consensus 483 Ka~~rrg~a~ 492 (496)
.+|...+.++
T Consensus 357 ~~~~~~~~~~ 366 (530)
T 2ooe_A 357 LVYIQYMKFA 366 (530)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5666655443
No 279
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=94.23 E-value=0.063 Score=54.86 Aligned_cols=45 Identities=11% Similarity=0.092 Sum_probs=37.1
Q ss_pred HHhhhHHHHHHHh----ccCHHHHHHHHHHHhcccCC---Ccchhccccccc
Q 011003 448 VACNLNNAACKLK----LKDYKQAEKLCTKKCESSVQ---KGSGIHSDGRFR 492 (496)
Q Consensus 448 ~~~~~N~a~~~~k----l~~~~~Ai~~~~~al~~dp~---~~Ka~~rrg~a~ 492 (496)
..++.|++.+|.+ .+++.+|+..+++|++.+|+ +..|++..|..+
T Consensus 399 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~~a~~~l~~~~ 450 (490)
T 2xm6_A 399 SAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKKLT 450 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCHHHHHHHHhcC
Confidence 5678899999998 89999999999999999844 888888777654
No 280
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=93.91 E-value=0.08 Score=39.96 Aligned_cols=42 Identities=24% Similarity=0.184 Sum_probs=35.8
Q ss_pred cChHH-HHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhcc
Q 011003 390 MNTEE-KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (496)
Q Consensus 390 ~~~~e-~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~ 431 (496)
|+..+ .++.|..+-.+|...=+.|+|.+|+.+|..|+++|..
T Consensus 1 M~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 1 MSAQVMLEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 34455 6778889999999999999999999999999998743
No 281
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=93.89 E-value=0.021 Score=57.57 Aligned_cols=51 Identities=18% Similarity=0.210 Sum_probs=33.7
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHH
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKK 474 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 474 (496)
.+...|+.+|..|+|++|...|+++ ..|.++|.|+.++|+|++|++.+.+|
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a-----------------------~n~~~LA~~L~~Lg~yq~AVea~~KA 174 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV-----------------------SNFGRLASTLVHLGEYQAAVDGARKA 174 (449)
T ss_dssp -------------CTTTHHHHHHHT-----------------------TCHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-----------------------hhHHHHHHHHHHhccHHHHHHHHHHc
Confidence 7788899999999999999999976 24678999999999999999999999
No 282
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=93.76 E-value=0.1 Score=53.92 Aligned_cols=64 Identities=17% Similarity=0.080 Sum_probs=55.7
Q ss_pred HhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhcccc
Q 011003 410 FKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDG 489 (496)
Q Consensus 410 fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg 489 (496)
.+.|++.+|...|.+|++.++.+ ..+|.+.+..+++++++.+|+..+++|++..| ++..|+..+
T Consensus 23 ~~~~~~~~a~~~~e~al~~~P~~---------------~~~w~~~~~~~~~~~~~~~a~~~~~ral~~~p-~~~lw~~~~ 86 (530)
T 2ooe_A 23 AQNQPIDKARKTYERLVAQFPSS---------------GRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVL-HIDLWKCYL 86 (530)
T ss_dssp HHSSCHHHHHHHHHHHHTTCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTTCC-CHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC-ChHHHHHHH
Confidence 45789999999999999986554 78899999999999999999999999999999 676665444
No 283
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=93.68 E-value=0.03 Score=56.89 Aligned_cols=89 Identities=18% Similarity=0.030 Sum_probs=49.0
Q ss_pred HHhhhhhHhcc---cHHHHHHHHHHHhhhhccC--------------CCCChHHHHHHH------HHHHHhhhHHHHH-H
Q 011003 403 KEQGNTLFKAG---KYARASKRYEKAVKYIEYD--------------TSFGDEEKKQAK------ALKVACNLNNAAC-K 458 (496)
Q Consensus 403 k~~Gn~~fk~~---~y~~A~~~Y~~al~~~~~~--------------~~~~~~~~~~~~------~~~~~~~~N~a~~-~ 458 (496)
...|..+.+.| ++.+|+..|++|++.-+.. .....+..+.+. +-...++.|++.+ +
T Consensus 180 ~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~g~~~a~~~Lg~~~~ 259 (452)
T 3e4b_A 180 VELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIAPGYPASWVSLAQLLY 259 (452)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHGGGSTHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 34566667778 9999999999998752211 000000000000 2233455666666 3
Q ss_pred --HhccCHHHHHHHHHHHhcccCCCcchhcccccccc
Q 011003 459 --LKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRF 493 (496)
Q Consensus 459 --~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~ 493 (496)
...+++.+|+..+.++++. .++.|++..|.+|.
T Consensus 260 ~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~ 294 (452)
T 3e4b_A 260 DFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY 294 (452)
T ss_dssp HSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred hCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 3556666666666666643 36666666665553
No 284
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=93.42 E-value=0.2 Score=50.40 Aligned_cols=97 Identities=8% Similarity=-0.095 Sum_probs=65.9
Q ss_pred HHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhc------cCCCCChHHHHHHHH------HHHHhhhHHHHHHHhc
Q 011003 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIE------YDTSFGDEEKKQAKA------LKVACNLNNAACKLKL 461 (496)
Q Consensus 394 e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~------~~~~~~~~~~~~~~~------~~~~~~~N~a~~~~kl 461 (496)
.-...+..+...|+.+++.|+|++|+..|.+|...-. .+-...+ ...... ..+.-+..++.+|.+.
T Consensus 143 ~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk~v~~aCv~~~e--f~lA~~~~l~L~~~ad~l~~lv~~Yek~ 220 (449)
T 1b89_A 143 LLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKE--FRLAQMCGLHIVVHADELEELINYYQDR 220 (449)
T ss_dssp HHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTC--HHHHHHTTTTTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHhhhHHHHHHHHHHhccHHHHHHHHHHcCCchhHHHHHHHHHHcCc--HHHHHHHHHHHHhCHhhHHHHHHHHHHC
Confidence 3456677888899999999999999999999954310 0000000 000000 0011122477889999
Q ss_pred cCHHHHHHHHHHHhcccCCCcchhccccccc
Q 011003 462 KDYKQAEKLCTKKCESSVQKGSGIHSDGRFR 492 (496)
Q Consensus 462 ~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~ 492 (496)
|+|.+|+..++++|.+++.+.-++...|.+|
T Consensus 221 G~~eEai~lLe~aL~le~ah~~~ftel~il~ 251 (449)
T 1b89_A 221 GYFEELITMLEAALGLERAHMGMFTELAILY 251 (449)
T ss_dssp TCHHHHHHHHHHHTTSTTCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999888777766554
No 285
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.22 E-value=0.052 Score=61.81 Aligned_cols=88 Identities=13% Similarity=-0.039 Sum_probs=60.5
Q ss_pred HHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCCh--HHHHHH-----HHHHHHhhhHHHHHHHhccCHHHHHHHHHHHh
Q 011003 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD--EEKKQA-----KALKVACNLNNAACKLKLKDYKQAEKLCTKKC 475 (496)
Q Consensus 403 k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~--~~~~~~-----~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 475 (496)
++-|..+...|.|++|+..|+++-........+-+ ....+. +-....+|+++|.+++++++|++|++.+.+|
T Consensus 1053 ~eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA- 1131 (1630)
T 1xi4_A 1053 PDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA- 1131 (1630)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-
Confidence 34588889999999999999998644221000000 001111 1233778999999999999999999999886
Q ss_pred cccCCCcchhcccccccccc
Q 011003 476 ESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 476 ~~dp~~~Ka~~rrg~a~~~l 495 (496)
++..+|++.|.++..+
T Consensus 1132 ----dD~say~eVa~~~~~l 1147 (1630)
T 1xi4_A 1132 ----DDPSSYMEVVQAANTS 1147 (1630)
T ss_pred ----CChHHHHHHHHHHHHc
Confidence 7778888887776543
No 286
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.20 E-value=0.086 Score=60.09 Aligned_cols=18 Identities=22% Similarity=0.375 Sum_probs=10.0
Q ss_pred CcccEEEEcCccchhhHH
Q 011003 314 EEQLFEFKTDEEQVIDGL 331 (496)
Q Consensus 314 ~~~~~~~~lg~~~~~~gl 331 (496)
.++-+.+.+.+..++|-+
T Consensus 321 ~G~vl~v~v~~~~iv~yi 338 (1630)
T 1xi4_A 321 KGQVLSVCVEEENIIPYI 338 (1630)
T ss_pred CceEEEEEEccchhhhhH
Confidence 445555666665555544
No 287
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.97 E-value=0.053 Score=41.91 Aligned_cols=47 Identities=9% Similarity=-0.050 Sum_probs=40.1
Q ss_pred HHhhhHHHHHHHhccC---HHHHHHHHHHHhcccCCCcchhccccccccc
Q 011003 448 VACNLNNAACKLKLKD---YKQAEKLCTKKCESSVQKGSGIHSDGRFRFG 494 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~---~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~ 494 (496)
..++..+|.+++-.++ ..+|...+.+||++||+|++|++-.|.+++.
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~ 55 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI 55 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH
Confidence 5567788888876665 7999999999999999999999999877654
No 288
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=92.50 E-value=0.18 Score=51.43 Aligned_cols=91 Identities=18% Similarity=0.102 Sum_probs=51.4
Q ss_pred hhHHhhhhhHh----cccHHHHHHHHHHHhhhhc------------cCC--CCChHHH-----HHHHHHHHHhhhHHHHH
Q 011003 401 KKKEQGNTLFK----AGKYARASKRYEKAVKYIE------------YDT--SFGDEEK-----KQAKALKVACNLNNAAC 457 (496)
Q Consensus 401 ~~k~~Gn~~fk----~~~y~~A~~~Y~~al~~~~------------~~~--~~~~~~~-----~~~~~~~~~~~~N~a~~ 457 (496)
.....|..++. .+++.+|+..|++|++.-. ... ..+.+.- .....-....+.|++.+
T Consensus 41 a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~ 120 (490)
T 2xm6_A 41 AQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKGLPQAQQNLGVM 120 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 34445666666 7888888888888876410 000 0000000 01111224456677777
Q ss_pred HHh----ccCHHHHHHHHHHHhcccCCCcchhcccccccc
Q 011003 458 KLK----LKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRF 493 (496)
Q Consensus 458 ~~k----l~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~ 493 (496)
|.. .+++.+|+..+.++++. +++.|++..|.+|.
T Consensus 121 y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~ 158 (490)
T 2xm6_A 121 YHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYF 158 (490)
T ss_dssp HHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 777 67777777777777654 46677777766654
No 289
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=92.28 E-value=0.28 Score=39.54 Aligned_cols=69 Identities=23% Similarity=0.277 Sum_probs=46.3
Q ss_pred ccChH-HHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCC--ChHHHHHHHHHHHHhhhHHHHH
Q 011003 389 DMNTE-EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF--GDEEKKQAKALKVACNLNNAAC 457 (496)
Q Consensus 389 ~~~~~-e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~--~~~~~~~~~~~~~~~~~N~a~~ 457 (496)
.|+.. +.++.|..+-.+|...=+.++|.+|+.+|..|+++|...... .+......-..++.-|++||..
T Consensus 7 ~m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~~lr~K~~eYl~RAE~ 78 (117)
T 2cpt_A 7 GMSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEK 78 (117)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45545 678888888899999999999999999999999987543211 1222233333344445555543
No 290
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=91.95 E-value=0.11 Score=52.57 Aligned_cols=61 Identities=15% Similarity=-0.010 Sum_probs=34.5
Q ss_pred hcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhcc-----CHHHHHHHHHHHhcccCCCcchh
Q 011003 411 KAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK-----DYKQAEKLCTKKCESSVQKGSGI 485 (496)
Q Consensus 411 k~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~-----~~~~Ai~~~~~al~~dp~~~Ka~ 485 (496)
..+++.+|+..|++|++.- ...++.|++.+|. .| ++.+|+..+.+|+ +.++.|+
T Consensus 263 ~~~d~~~A~~~~~~Aa~~g-----------------~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~ 321 (452)
T 3e4b_A 263 ELGDVEQMMKYLDNGRAAD-----------------QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAAD 321 (452)
T ss_dssp GGCCHHHHHHHHHHHHHTT-----------------CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHH
T ss_pred CCCCHHHHHHHHHHHHHCC-----------------CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHH
Confidence 4677888888888877541 1334455555555 22 5555555555555 4555555
Q ss_pred ccccccc
Q 011003 486 HSDGRFR 492 (496)
Q Consensus 486 ~rrg~a~ 492 (496)
|+.|.+|
T Consensus 322 ~~Lg~~y 328 (452)
T 3e4b_A 322 YYLGQIY 328 (452)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 291
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=91.17 E-value=0.31 Score=36.82 Aligned_cols=42 Identities=19% Similarity=0.246 Sum_probs=34.3
Q ss_pred cChHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhcc
Q 011003 390 MNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (496)
Q Consensus 390 ~~~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~ 431 (496)
|+..+.+..|..+-.+|...=+.|+|.+|+.+|..|+.+|..
T Consensus 4 m~~~~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~ 45 (85)
T 2v6x_A 4 MSTGDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLML 45 (85)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 333345677888888888999999999999999999998743
No 292
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=91.13 E-value=0.32 Score=52.37 Aligned_cols=59 Identities=20% Similarity=0.180 Sum_probs=52.1
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHH
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKK 474 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 474 (496)
-+-.++..+..+++|+.|+..-++|+.+.+.. -.+|.+||.||.++++|+.|+-..+-+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPse---------------F~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDS---------------FESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchh---------------hHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 35567778889999999999999999997665 788999999999999999999888776
No 293
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=90.92 E-value=0.16 Score=48.69 Aligned_cols=61 Identities=11% Similarity=-0.011 Sum_probs=47.1
Q ss_pred ccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc----------cCCCc
Q 011003 413 GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES----------SVQKG 482 (496)
Q Consensus 413 ~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~----------dp~~~ 482 (496)
+++++|+..|+++....+.. ....++.| |++++|+|.+|....+.++++ +|+|+
T Consensus 192 ~~~q~A~~~f~El~~~~p~~-------------~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~ 255 (310)
T 3mv2_B 192 ETATSNFYYYEELSQTFPTW-------------KTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKP 255 (310)
T ss_dssp STTTHHHHHHHHHHTTSCSH-------------HHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHH
T ss_pred ccHHHHHHHHHHHHHhCCCc-------------ccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCH
Confidence 38999999999987653320 12345566 899999999999999988887 58898
Q ss_pred chhcccc
Q 011003 483 SGIHSDG 489 (496)
Q Consensus 483 Ka~~rrg 489 (496)
.++..+.
T Consensus 256 ~~LaN~i 262 (310)
T 3mv2_B 256 TFLANQI 262 (310)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8886663
No 294
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=90.86 E-value=0.29 Score=36.79 Aligned_cols=43 Identities=23% Similarity=0.200 Sum_probs=36.1
Q ss_pred ccChH-HHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhcc
Q 011003 389 DMNTE-EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (496)
Q Consensus 389 ~~~~~-e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~ 431 (496)
-|++. ..++.|..+-.+|...=+.|+|.+|+.+|.+|+++|..
T Consensus 8 ~~~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 8 HMSAQVMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 45554 45688899999999999999999999999999998743
No 295
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=90.66 E-value=0.31 Score=47.66 Aligned_cols=62 Identities=5% Similarity=-0.099 Sum_probs=51.3
Q ss_pred hhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCc
Q 011003 405 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKG 482 (496)
Q Consensus 405 ~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~ 482 (496)
.+..++.+|++++|+..+++|+.+- +. ...|.-++.++.-.|++.+|++.+++|+.++|...
T Consensus 283 lal~~l~~gd~d~A~~~l~rAl~Ln---------------~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 283 KAVSALVKGKTDESYQAINTGIDLE---------------MS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHC---------------CC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHhcC---------------CC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 3445566899999999999999982 11 44566789999999999999999999999999764
No 296
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=90.42 E-value=0.63 Score=35.79 Aligned_cols=65 Identities=14% Similarity=0.108 Sum_probs=43.6
Q ss_pred HHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCC-CChHHHHHHHHHHHHhhhHHHHHH
Q 011003 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS-FGDEEKKQAKALKVACNLNNAACK 458 (496)
Q Consensus 394 e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~-~~~~~~~~~~~~~~~~~~N~a~~~ 458 (496)
..++.|..+-.+|..+=+.++|.+|+.+|..|+.+|..... ..++.....-..++.-|++||...
T Consensus 10 ~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eYl~RAE~L 75 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAENI 75 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788888899999999999999999999998754311 122233333344455566666443
No 297
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=90.08 E-value=0.037 Score=47.01 Aligned_cols=68 Identities=9% Similarity=0.092 Sum_probs=52.4
Q ss_pred ccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhcc---CHHHHHHHHHHHhccc-C-CCcchhcc
Q 011003 413 GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK---DYKQAEKLCTKKCESS-V-QKGSGIHS 487 (496)
Q Consensus 413 ~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~---~~~~Ai~~~~~al~~d-p-~~~Ka~~r 487 (496)
.....+.+.|.+++.. ......+..|.|.|+.+.+ +.++++..++.+++.+ | ++.+++|.
T Consensus 12 ~~l~~~~~~y~~e~~~---------------~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~ 76 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAA---------------GSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFY 76 (152)
T ss_dssp HHHHHHHHHHHHHHHT---------------TCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcc---------------CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHH
Confidence 3455666777777653 1123677889999999988 6789999999999999 7 67899999
Q ss_pred cccccccc
Q 011003 488 DGRFRFGR 495 (496)
Q Consensus 488 rg~a~~~l 495 (496)
.|.+++.+
T Consensus 77 LAv~~~kl 84 (152)
T 1pc2_A 77 LAVGNYRL 84 (152)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 99887643
No 298
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=89.83 E-value=0.74 Score=34.81 Aligned_cols=60 Identities=17% Similarity=0.174 Sum_probs=38.3
Q ss_pred HHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCC-CChHHHHHHHHHHHHhhhHHHH
Q 011003 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS-FGDEEKKQAKALKVACNLNNAA 456 (496)
Q Consensus 397 ~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~-~~~~~~~~~~~~~~~~~~N~a~ 456 (496)
..+..+-.++..+=+.|+|.+|+.+|..|+++|..... ..++.....-..++.-|.+||.
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~~lr~K~~eYl~RAE 74 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAE 74 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHH
Confidence 34566777888888999999999999999998753211 1122223323334444556654
No 299
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=89.40 E-value=0.32 Score=45.87 Aligned_cols=47 Identities=4% Similarity=-0.224 Sum_probs=40.7
Q ss_pred HHHhhhHHHHHHHhc-----cCHHHHHHHHHHHhcccCCC-cchhcccccccc
Q 011003 447 KVACNLNNAACKLKL-----KDYKQAEKLCTKKCESSVQK-GSGIHSDGRFRF 493 (496)
Q Consensus 447 ~~~~~~N~a~~~~kl-----~~~~~Ai~~~~~al~~dp~~-~Ka~~rrg~a~~ 493 (496)
.-.+|.-++..|.++ |+.++|..++++||+++|+. +.++|..|..+.
T Consensus 198 ~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~ 250 (301)
T 3u64_A 198 EGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALC 250 (301)
T ss_dssp HHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHH
Confidence 466888999999996 99999999999999999975 888888776654
No 300
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=87.96 E-value=0.22 Score=47.67 Aligned_cols=63 Identities=8% Similarity=-0.043 Sum_probs=52.2
Q ss_pred HhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccC
Q 011003 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSV 479 (496)
Q Consensus 404 ~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp 479 (496)
--|..++..|++++|++.+.++|..-+. .....++.-++.+++++++...|.+.+.+..+.+|
T Consensus 105 ~la~i~~~~g~~eeAL~~l~~~i~~~~~-------------~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~ 167 (310)
T 3mv2_B 105 LLATAQAILGDLDKSLETCVEGIDNDEA-------------EGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIE 167 (310)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTSSCS-------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHhccCCC-------------cCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 5677788899999999999999765210 13366777889999999999999999999999988
No 301
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=86.58 E-value=4.4 Score=38.51 Aligned_cols=83 Identities=22% Similarity=0.187 Sum_probs=52.8
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHH-----------------------------HHHH-
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAK-----------------------------ALKV- 448 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~-----------------------------~~~~- 448 (496)
.......|-++|+.|+|.+|+..|...|..+.-..-.++++..++. .+..
T Consensus 114 L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELA 193 (325)
T 3mv2_A 114 VNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELA 193 (325)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 3334558999999999999999999999876422111111111110 0111
Q ss_pred -------------HhhhHHH-HHHHhccCHHHHHHHHHHHhcccCCC
Q 011003 449 -------------ACNLNNA-ACKLKLKDYKQAEKLCTKKCESSVQK 481 (496)
Q Consensus 449 -------------~~~~N~a-~~~~kl~~~~~Ai~~~~~al~~dp~~ 481 (496)
.+-++.| ...+|.+||.-|-..|++.|++.|+.
T Consensus 194 AYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~ 240 (325)
T 3mv2_A 194 AYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSG 240 (325)
T ss_dssp HHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSS
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCH
Confidence 1111222 23568999999999999999999854
No 302
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=86.23 E-value=1.9 Score=32.55 Aligned_cols=42 Identities=24% Similarity=0.400 Sum_probs=33.9
Q ss_pred HHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCCh
Q 011003 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD 437 (496)
Q Consensus 396 ~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~ 437 (496)
+..|-..-.++..+.+.|+|++||.++.+|..+|....+..+
T Consensus 12 Ln~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmkltq 53 (97)
T 2crb_A 12 LNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKLTE 53 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 445666677889999999999999999999999876544443
No 303
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=84.63 E-value=0.47 Score=44.73 Aligned_cols=64 Identities=9% Similarity=0.078 Sum_probs=50.1
Q ss_pred hHHhhhhhHh-----cccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHH-HHhhhHHHHHHHh-ccCHHHHHHHHHHH
Q 011003 402 KKEQGNTLFK-----AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALK-VACNLNNAACKLK-LKDYKQAEKLCTKK 474 (496)
Q Consensus 402 ~k~~Gn~~fk-----~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~N~a~~~~k-l~~~~~Ai~~~~~a 474 (496)
+.-.|.-+++ -|+.++|.++|++||++-+ .. +..+...|..++. ++++.+|...+++|
T Consensus 202 ~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP---------------~~~id~~v~YA~~l~~~~gd~~~a~~~L~kA 266 (301)
T 3u64_A 202 WNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCS---------------AHDPDHHITYADALCIPLNNRAGFDEALDRA 266 (301)
T ss_dssp HHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCC---------------TTCSHHHHHHHHHTTTTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCC---------------CCCchHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3344555555 3999999999999999833 22 5566777888877 59999999999999
Q ss_pred hcccCC
Q 011003 475 CESSVQ 480 (496)
Q Consensus 475 l~~dp~ 480 (496)
|..+|+
T Consensus 267 L~a~p~ 272 (301)
T 3u64_A 267 LAIDPE 272 (301)
T ss_dssp HHCCGG
T ss_pred HcCCCC
Confidence 999886
No 304
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=82.89 E-value=0.47 Score=36.99 Aligned_cols=47 Identities=11% Similarity=0.014 Sum_probs=36.3
Q ss_pred HhhhHHHHHHHhccCHHHHHHHHHHHhccc-------CCCcchhcccccccccc
Q 011003 449 ACNLNNAACKLKLKDYKQAEKLCTKKCESS-------VQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 449 ~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d-------p~~~Ka~~rrg~a~~~l 495 (496)
.-+..++..+++.++|..|+..+.+|++.. +.+...++..|.+++.+
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~ 59 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQ 59 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHc
Confidence 446789999999999999999999999864 23455666666666543
No 305
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=82.47 E-value=9.4 Score=36.21 Aligned_cols=30 Identities=13% Similarity=0.297 Sum_probs=25.9
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhc
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIE 430 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~ 430 (496)
.....|-++|..|+|.+|+..|...|..+.
T Consensus 104 ~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~ 133 (320)
T 3mkr_B 104 QRLQLCYQLTTVGKFEEAVEKFRSILLSVP 133 (320)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 345789999999999999999999998763
No 306
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=77.73 E-value=8.8 Score=28.66 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=29.2
Q ss_pred HHHhhhHHhhhhhHhcccHHHHHHHHHHHhhh
Q 011003 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKY 428 (496)
Q Consensus 397 ~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~ 428 (496)
..+..+..+|..+|+.++|.+|+..+.++..+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 56777889999999999999999999999976
No 307
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=76.61 E-value=2.1 Score=41.82 Aligned_cols=41 Identities=7% Similarity=-0.088 Sum_probs=31.7
Q ss_pred hhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhccccccc
Q 011003 451 NLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFR 492 (496)
Q Consensus 451 ~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~ 492 (496)
|.=+|.+++..+++.+|+..+++||.++|+ .-+|..+|+++
T Consensus 280 ~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~ 320 (372)
T 3ly7_A 280 YQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVY 320 (372)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHH
Confidence 344666777789999999999999999975 45666666554
No 308
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=76.40 E-value=2.9 Score=41.83 Aligned_cols=43 Identities=16% Similarity=0.135 Sum_probs=27.8
Q ss_pred ChHHHHHHHhhhHHhh--hhhHh-cccHHHHHHHHHHHhhhhccCC
Q 011003 391 NTEEKIEAAGKKKEQG--NTLFK-AGKYARASKRYEKAVKYIEYDT 433 (496)
Q Consensus 391 ~~~e~~~~a~~~k~~G--n~~fk-~~~y~~A~~~Y~~al~~~~~~~ 433 (496)
+..+|+..|+.+++++ +.--+ ..--++|+.+|++|+++|+...
T Consensus 421 sL~eKi~~AE~~~~k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~ 466 (526)
T 2wb7_A 421 SLQEKIDEAEQLLAKAKGMNNENAIEYAQGAIDEYKAAINDLQKAA 466 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4445666666666665 22222 2234789999999999987654
No 309
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.99 E-value=12 Score=29.71 Aligned_cols=74 Identities=9% Similarity=0.068 Sum_probs=54.6
Q ss_pred HHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhcc-------CCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHH
Q 011003 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY-------DTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQA 467 (496)
Q Consensus 395 ~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~-------~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~A 467 (496)
.-+.|-.+..+|-.+=..|+-..|+.+|+++|..|.. ......+.+.+...+..+...||..+.-+++.....
T Consensus 18 ~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~Le~~ 97 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILEKG 97 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3345555666666666678888888888888887743 223556889999999999999999999888755544
Q ss_pred H
Q 011003 468 E 468 (496)
Q Consensus 468 i 468 (496)
.
T Consensus 98 ~ 98 (116)
T 2dl1_A 98 L 98 (116)
T ss_dssp H
T ss_pred C
Confidence 3
No 310
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=71.78 E-value=6.2 Score=42.36 Aligned_cols=48 Identities=13% Similarity=0.016 Sum_probs=40.8
Q ss_pred HHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhcccccccccc
Q 011003 448 VACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
..++.--|.-+++.++|+-|+..+.+|..+-|+..+.||+.|++|..+
T Consensus 337 ~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l 384 (754)
T 4gns_B 337 SDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKK 384 (754)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHh
Confidence 334444566667789999999999999999999999999999999865
No 311
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=69.88 E-value=6.3 Score=42.26 Aligned_cols=74 Identities=15% Similarity=0.085 Sum_probs=43.2
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhh-----hccCCCCChHHHHHHHH-HHHHhhhHHHH-HHHhccCHHHHHHHHHH
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKY-----IEYDTSFGDEEKKQAKA-LKVACNLNNAA-CKLKLKDYKQAEKLCTK 473 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~-----~~~~~~~~~~~~~~~~~-~~~~~~~N~a~-~~~kl~~~~~Ai~~~~~ 473 (496)
.++.-|..+.+.++++.|.++|.++-.+ +.... .+.+...++.. ....=..|.|. ||++++++++|++.|.+
T Consensus 683 ~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~-~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 683 KWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSF-NNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHc-CCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHH
Confidence 3467888889999999999999987443 11111 11121112111 11111234444 77788888888887765
Q ss_pred Hh
Q 011003 474 KC 475 (496)
Q Consensus 474 al 475 (496)
.-
T Consensus 762 ~~ 763 (814)
T 3mkq_A 762 SQ 763 (814)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 312
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=69.45 E-value=3.4 Score=38.28 Aligned_cols=68 Identities=12% Similarity=0.020 Sum_probs=53.7
Q ss_pred hhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcch-
Q 011003 406 GNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSG- 484 (496)
Q Consensus 406 Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka- 484 (496)
.+.+++.++..+|+......++--+.+ ..+-.-+..-++-.|+|++|+..++.+.+++|...+.
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~d---------------a~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a 68 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKD---------------ASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGA 68 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcC---------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHH
Confidence 457899999999999999999984433 4444455556667899999999999999999988654
Q ss_pred -hccc
Q 011003 485 -IHSD 488 (496)
Q Consensus 485 -~~rr 488 (496)
+||.
T Consensus 69 ~~yr~ 73 (273)
T 1zbp_A 69 SQLRH 73 (273)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 4543
No 313
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=68.11 E-value=1.1 Score=41.28 Aligned_cols=65 Identities=15% Similarity=0.146 Sum_probs=0.0
Q ss_pred HHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCC-ChHHHHHHHHHHHHhhhHHHHH
Q 011003 393 EEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-GDEEKKQAKALKVACNLNNAAC 457 (496)
Q Consensus 393 ~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~-~~~~~~~~~~~~~~~~~N~a~~ 457 (496)
......|..+-.+|.++=+.|+|.+|+.+|..|+.+|...... .++...+.-..+..-|++||..
T Consensus 17 dp~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~alk~e~d~~~k~~lr~Ki~eYl~RAE~ 82 (257)
T 2ymb_A 17 DPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAEN 82 (257)
T ss_dssp ------------------------------------------------------------------
T ss_pred ChhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456778888889999999999999999999999987543221 1222233333445556667654
No 314
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=67.67 E-value=12 Score=36.92 Aligned_cols=66 Identities=17% Similarity=0.115 Sum_probs=55.0
Q ss_pred HhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhccc
Q 011003 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESS 478 (496)
Q Consensus 404 ~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~d 478 (496)
..|+-++..|+|.+|+..+++.++.+.... + ......+|...+..|..++++.++...+++|....
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~d---d------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~ 169 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLD---D------KNLLVEVQLLESKTYHALSNLPKARAALTSARTTA 169 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSS---C------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccc---c------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhh
Confidence 567888999999999999999999875421 1 45678889999999999999999999999887553
No 315
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=67.19 E-value=6.8 Score=28.36 Aligned_cols=40 Identities=15% Similarity=0.213 Sum_probs=33.9
Q ss_pred hHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhcc
Q 011003 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (496)
Q Consensus 392 ~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~ 431 (496)
.+++.+...+--..|..+..+|++.+|+.++.+|++.+..
T Consensus 10 ~e~~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 10 AEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 4556666777788999999999999999999999998654
No 316
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=67.01 E-value=3.4 Score=41.36 Aligned_cols=65 Identities=14% Similarity=0.014 Sum_probs=53.6
Q ss_pred hhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 401 ~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
.....|.-+++.|++..|++.|.++...+... ..+..++.+...+++..++|..|....++|-.+
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~------------~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAIST------------GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCC------------CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCh------------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 34678899999999999999999998875432 124677888899999999999999999998654
No 317
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=57.59 E-value=20 Score=27.32 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=35.7
Q ss_pred ChHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhcc
Q 011003 391 NTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (496)
Q Consensus 391 ~~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~ 431 (496)
+.+++.+...+--..|..+..+|+++.|+.++.+|+..+..
T Consensus 12 d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 56677777888889999999999999999999999998754
No 318
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=56.20 E-value=23 Score=32.55 Aligned_cols=53 Identities=19% Similarity=0.224 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHh-ccCHHHHHHHHHHHhc
Q 011003 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKKCE 476 (496)
Q Consensus 416 ~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al~ 476 (496)
+.|...|++|+.+. ...... ++.+..+.+|.+.-|+. +++.++|+.-+.+|+.
T Consensus 173 e~a~~aY~~A~~iA-~~L~pt-------hPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPT-------HPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTT-------CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCC-------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 57888999999886 332222 67889999999999887 8999999998888874
No 319
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=56.12 E-value=18 Score=32.73 Aligned_cols=54 Identities=13% Similarity=0.165 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHh-ccCHHHHHHHHHHHhc
Q 011003 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKKCE 476 (496)
Q Consensus 416 ~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al~ 476 (496)
+.|...|++|+.+..... ...++.+..+.+|.+.-|+. +++..+|+.-+.+|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L-------~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTEL-------PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHS-------CTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccC-------CCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 578889999998754221 12277889999999998887 8999999998888774
No 320
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=52.84 E-value=13 Score=33.46 Aligned_cols=60 Identities=12% Similarity=-0.018 Sum_probs=46.5
Q ss_pred hcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHh-ccCHHHHHHHHHHHhcc
Q 011003 411 KAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKKCES 477 (496)
Q Consensus 411 k~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al~~ 477 (496)
..|+-+.|...|+.|..+.... ....++.+..+.+|.|..|+. +++..+|+.-+.+|+..
T Consensus 137 ~~g~~e~a~~aY~~A~~iA~~~-------L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 137 GLCSLEDSKKIHQDAFTLLCEH-------PDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHC-------GGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHhh-------CCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 4556788999999999885432 122367778899999998885 78899999999999653
No 321
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=52.38 E-value=22 Score=32.34 Aligned_cols=55 Identities=15% Similarity=0.183 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHh-ccCHHHHHHHHHHHhc
Q 011003 415 YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKKCE 476 (496)
Q Consensus 415 y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al~ 476 (496)
-..|...|++|..+..... ...++++..+.+|.|.-|+. +++..+|+.-+.+|+.
T Consensus 147 ~~~a~~aY~~A~~iA~~~L-------~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHM-------QPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHS-------CTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhC-------CCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3678889999988754221 12278889999999988886 7899999998888764
No 322
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=52.20 E-value=22 Score=32.65 Aligned_cols=54 Identities=13% Similarity=0.180 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHh-ccCHHHHHHHHHHHhc
Q 011003 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKKCE 476 (496)
Q Consensus 416 ~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al~ 476 (496)
+.|...|++|+.+..... ...++++..+.+|.+.-|+. +++..+|+.-+.+|+.
T Consensus 152 e~a~~aY~~A~~iA~~~L-------~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTEL-------APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHS-------CTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC-------CCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 578889999998754221 12278889999999998886 7899999988887763
No 323
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=51.45 E-value=23 Score=32.41 Aligned_cols=54 Identities=13% Similarity=0.165 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHh-ccCHHHHHHHHHHHhc
Q 011003 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKKCE 476 (496)
Q Consensus 416 ~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al~ 476 (496)
+.|...|++|..+..... ...++++..+.+|.+.-|+. +++..+|+.-+.+|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L-------~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTEL-------PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHS-------CTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhC-------CCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 677889999988753221 12278889999999988886 7999999998888764
No 324
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=49.54 E-value=23 Score=34.62 Aligned_cols=60 Identities=5% Similarity=-0.086 Sum_probs=48.2
Q ss_pred hhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHH
Q 011003 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKK 474 (496)
Q Consensus 400 ~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 474 (496)
..+...+..+...|++.+|+....+++.. +++.-.+|.-+-.|+...|+..+|+..+.++
T Consensus 172 ~a~~~~~~~~l~~g~~~~a~~~l~~~~~~---------------~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~ 231 (388)
T 2ff4_A 172 LAHTAKAEAEIACGRASAVIAELEALTFE---------------HPYREPLWTQLITAYYLSDRQSDALGAYRRV 231 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------STTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 44556677788999999999999998887 4444667778888999999999999887765
No 325
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=48.07 E-value=3.8 Score=41.18 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=0.0
Q ss_pred HHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccC
Q 011003 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD 432 (496)
Q Consensus 394 e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~ 432 (496)
+.++.|..+-.+|..+-+.|+|++|+.+|+.|++++...
T Consensus 6 ~~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~~ 44 (444)
T 2zan_A 6 TNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHV 44 (444)
T ss_dssp ---------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 456778888889999999999999999999999987643
No 326
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=48.02 E-value=28 Score=31.44 Aligned_cols=55 Identities=13% Similarity=0.212 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHh-ccCHHHHHHHHHHHhc
Q 011003 415 YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKKCE 476 (496)
Q Consensus 415 y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al~ 476 (496)
-+.|...|++|..+..... ...++.+..+.+|.|.-|+. +++..+|+.-+.+|+.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L-------~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEM-------PPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHS-------CTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhC-------CCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4678889999998753221 12278889999999988884 7899999998888764
No 327
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=47.08 E-value=36 Score=29.19 Aligned_cols=25 Identities=32% Similarity=0.331 Sum_probs=22.4
Q ss_pred hhHHHHHHHhccCHHHHHHHHHHHh
Q 011003 451 NLNNAACKLKLKDYKQAEKLCTKKC 475 (496)
Q Consensus 451 ~~N~a~~~~kl~~~~~Ai~~~~~al 475 (496)
..--++||.|+++|+.|+.+.++.|
T Consensus 65 ~YYk~LCy~klKdYkkA~~~le~il 89 (242)
T 3kae_A 65 KYYESLCYKKKKDYKKAIKSLESIL 89 (242)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3346899999999999999999999
No 328
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=46.68 E-value=25 Score=26.54 Aligned_cols=30 Identities=17% Similarity=0.039 Sum_probs=25.2
Q ss_pred HHHhhhHHHHHHHhccCHHHHHHHHHHHhc
Q 011003 447 KVACNLNNAACKLKLKDYKQAEKLCTKKCE 476 (496)
Q Consensus 447 ~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 476 (496)
.+..+.-+|..+++.++|++||++-.+|..
T Consensus 14 ~AH~~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 14 LAHQQSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhHhhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 466788899999999999999998777653
No 329
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=44.19 E-value=27 Score=32.14 Aligned_cols=58 Identities=24% Similarity=0.209 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHh-ccCHHHHHHHHHHHhcc
Q 011003 415 YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKKCES 477 (496)
Q Consensus 415 y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al~~ 477 (496)
-+.|...|++|..+..... +....++++..+.+|.+.-|+. +++..+|+.-+.+|+.-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L-----~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFL-----EKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHC-----TTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc-----CCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 3678889999988753211 0023378889999999999885 79999999999988754
No 330
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=40.63 E-value=8 Score=31.33 Aligned_cols=69 Identities=6% Similarity=0.040 Sum_probs=48.6
Q ss_pred cccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHH---HHHHHHHHhccc-C-CCcchhc
Q 011003 412 AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQ---AEKLCTKKCESS-V-QKGSGIH 486 (496)
Q Consensus 412 ~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~---Ai~~~~~al~~d-p-~~~Ka~~ 486 (496)
......+.+.|.+++.. .........|.|.|+.+..+... +|.-++..++.+ | .+-.++|
T Consensus 14 ~~~l~~~~~~y~~e~~~---------------~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY 78 (126)
T 1nzn_A 14 VEDLLKFEKKFQSEKAA---------------GSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVF 78 (126)
T ss_dssp HHHHHHHHHHHHHHHHH---------------SCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc---------------CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHH
Confidence 33455566667766553 11225667899999999888766 999999999887 5 5667888
Q ss_pred ccccccccc
Q 011003 487 SDGRFRFGR 495 (496)
Q Consensus 487 rrg~a~~~l 495 (496)
-.|.+++.+
T Consensus 79 ~LAvg~ykl 87 (126)
T 1nzn_A 79 YLAVGNYRL 87 (126)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 777766543
No 331
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=40.48 E-value=83 Score=23.56 Aligned_cols=66 Identities=18% Similarity=0.160 Sum_probs=42.6
Q ss_pred HHHhhhHHhhhhhHhc---ccHHHHHHHHHHHhhhhccC----CCCChHHHHHHHHHHHHhhhHHHHHHHhcc
Q 011003 397 EAAGKKKEQGNTLFKA---GKYARASKRYEKAVKYIEYD----TSFGDEEKKQAKALKVACNLNNAACKLKLK 462 (496)
Q Consensus 397 ~~a~~~k~~Gn~~fk~---~~y~~A~~~Y~~al~~~~~~----~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~ 462 (496)
+.|-.+..+|-..=.. |+-++|+..|++++.-|..- ..-..+.+.....+..+-..|+..+.-++.
T Consensus 14 ~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~RL~ 86 (89)
T 3eab_A 14 KQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRLQ 86 (89)
T ss_dssp HHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455444444 77777888888887766431 112457788888888888888888766553
No 332
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=38.76 E-value=66 Score=34.02 Aligned_cols=62 Identities=5% Similarity=-0.044 Sum_probs=49.0
Q ss_pred HhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccC---HHHHHHHHHHHhcccC--CCcch
Q 011003 410 FKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKD---YKQAEKLCTKKCESSV--QKGSG 484 (496)
Q Consensus 410 fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~---~~~Ai~~~~~al~~dp--~~~Ka 484 (496)
-+.+++..|...|.+++..++.. ..+|...+..-++.++ +..+...+++||...| .+++.
T Consensus 77 ~~~~~~~~aR~vyEraL~~fP~~---------------~~lW~~Yi~~E~~~~~~~~~~~v~~lfeRal~~~~~~~sv~L 141 (679)
T 4e6h_A 77 VSLKQWKQVYETFDKLHDRFPLM---------------ANIWCMRLSLEFDKMEELDAAVIEPVLARCLSKELGNNDLSL 141 (679)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTC--CCCHHHHHHHHHHHTCSSSCCCCHHH
T ss_pred HhcCcHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHhhCCcchHHHHHHHHHHHHHhcCCCCCHHH
Confidence 34578999999999999997655 6777778888888888 9999999999999884 56665
Q ss_pred hc
Q 011003 485 IH 486 (496)
Q Consensus 485 ~~ 486 (496)
|.
T Consensus 142 W~ 143 (679)
T 4e6h_A 142 WL 143 (679)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 333
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=37.79 E-value=45 Score=33.67 Aligned_cols=38 Identities=8% Similarity=-0.057 Sum_probs=33.2
Q ss_pred HHhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhc
Q 011003 448 VACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIH 486 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~ 486 (496)
..++.+.|.-+...++..+|...+.+|+.. |.+..-++
T Consensus 213 ~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~ 250 (493)
T 2uy1_A 213 EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSL 250 (493)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHH
Confidence 678889999999999999999999999999 98765444
No 334
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=34.45 E-value=42 Score=33.49 Aligned_cols=30 Identities=20% Similarity=0.058 Sum_probs=24.5
Q ss_pred HHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 448 VACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
..++.=+|.+||-+++|.+|+..|+++|..
T Consensus 190 ~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 190 YAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 445556778888899999999999999863
No 335
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=32.85 E-value=47 Score=33.32 Aligned_cols=30 Identities=17% Similarity=0.158 Sum_probs=24.6
Q ss_pred HHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 448 VACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
..++.=+|.+||-+++|.+|+..|+++|..
T Consensus 202 ~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 202 WAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 445555778888899999999999999864
No 336
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=32.75 E-value=25 Score=28.49 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=28.1
Q ss_pred HHHhhhHHhhhhhHhcccHHHHHHHHHHHhhh
Q 011003 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKY 428 (496)
Q Consensus 397 ~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~ 428 (496)
+.+.++..+|..++.+|+..+|.++|-+|...
T Consensus 5 ~lAe~yL~EA~ell~kGD~vQAsEK~ykAaee 36 (129)
T 2jpu_A 5 TSAEVYYEEAEEFLSKGDLVQACEKYYKAAEE 36 (129)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 45778889999999999999999999888865
No 337
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=32.33 E-value=46 Score=33.29 Aligned_cols=30 Identities=13% Similarity=0.055 Sum_probs=24.2
Q ss_pred HHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 448 VACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
..++.=+|.+||-+++|.+|+..|+++|..
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 445555777888889999999999999863
No 338
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=31.76 E-value=87 Score=26.80 Aligned_cols=30 Identities=10% Similarity=0.058 Sum_probs=26.2
Q ss_pred HhhhHHhhhhhHhcccHHHHHHHHHHHhhh
Q 011003 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKY 428 (496)
Q Consensus 399 a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~ 428 (496)
-..++.-|....++|++.-|.++|+++-.+
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~ 63 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQTQHSF 63 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHhCCH
Confidence 446889999999999999999999987654
No 339
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=31.69 E-value=50 Score=34.99 Aligned_cols=52 Identities=6% Similarity=-0.082 Sum_probs=38.6
Q ss_pred hcccHHHHH-HHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 411 KAGKYARAS-KRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 411 k~~~y~~A~-~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
..++...|+ ..|.+|+..++.+ ..++++.|....+.+++.+|...++++|+.
T Consensus 355 ~~~~~~~a~r~il~rAi~~~P~s---------------~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~ 407 (679)
T 4e6h_A 355 EKNTDSTVITKYLKLGQQCIPNS---------------AVLAFSLSEQYELNTKIPEIETTILSCIDR 407 (679)
T ss_dssp HHSCCTTHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 344445565 6666666654332 567889999999999999999999999875
No 340
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=31.50 E-value=79 Score=32.00 Aligned_cols=64 Identities=9% Similarity=-0.043 Sum_probs=48.3
Q ss_pred hHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 402 ~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
+---|.-.--+..+..|...|.+|+.+.+.. -..|+-+|..+.-.+++-+|+.++.++|-....
T Consensus 155 l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~---------------G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~P 218 (497)
T 1ya0_A 155 LVHLGDIARYRNQTSQAESYYRHAAQLVPSN---------------GQPYNQLAILASSKGDHLTTIFYYCRSIAVKFP 218 (497)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTB---------------SHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBC
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHhCCCC---------------CchHHHHHHHHhcccccHHHHHHHHHHHhcCCC
Confidence 3445555555667899999999999996554 556777888888888888888888888765433
No 341
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=31.04 E-value=1e+02 Score=31.13 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=25.3
Q ss_pred HHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhc
Q 011003 443 AKALKVACNLNNAACKLKLKDYKQAEKLCTKKCE 476 (496)
Q Consensus 443 ~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 476 (496)
...+++.+|+|. .+|...++|.+|+..|+++|.
T Consensus 190 A~allarvyL~~-~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 190 ASALLARMYLNA-EIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp HHHHHHHHHHTH-HHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-hhccChhHHHHHHHHHHHHHh
Confidence 455666777764 356678999999999999984
No 342
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=30.69 E-value=23 Score=37.42 Aligned_cols=47 Identities=6% Similarity=-0.031 Sum_probs=41.8
Q ss_pred HhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhcccccccccc
Q 011003 449 ACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFGR 495 (496)
Q Consensus 449 ~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l 495 (496)
.....+|...+..|+|.-|.+-++.++..+|+|..|..-+|.||.+|
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l 496 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQL 496 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 34567888899999999999999999999999999999999888765
No 343
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=36.18 E-value=11 Score=39.96 Aligned_cols=48 Identities=10% Similarity=-0.027 Sum_probs=42.8
Q ss_pred HhhhHHHHHHHhccCHHHHHHHHHHHhcccCCCcchhccccccccccC
Q 011003 449 ACNLNNAACKLKLKDYKQAEKLCTKKCESSVQKGSGIHSDGRFRFGRV 496 (496)
Q Consensus 449 ~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~~~Ka~~rrg~a~~~l~ 496 (496)
...+.+|..++..|+|.-|.+-++.++..+|+|..|..-+|.||.+|+
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~ 509 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLG 509 (668)
Confidence 345678888899999999999999999999999999999999998764
No 344
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=28.29 E-value=87 Score=23.27 Aligned_cols=38 Identities=13% Similarity=0.098 Sum_probs=33.1
Q ss_pred hHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhh
Q 011003 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYI 429 (496)
Q Consensus 392 ~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~ 429 (496)
.++-++.|....+.|..++++|++..|+.++.-|--++
T Consensus 28 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwL 65 (86)
T 2oo2_A 28 DEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWAWL 65 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 46778899999999999999999999999988776664
No 345
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=27.78 E-value=92 Score=23.21 Aligned_cols=38 Identities=13% Similarity=0.073 Sum_probs=32.1
Q ss_pred hHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhh
Q 011003 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYI 429 (496)
Q Consensus 392 ~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~ 429 (496)
.++-++.|....+.|..++++|++..|+.+++-|--++
T Consensus 32 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwL 69 (87)
T 2pmr_A 32 EEAVVERALNYRDDSVYYLEKGDHITSFGCITYAHGLL 69 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 35667899999999999999999999999987776653
No 346
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=27.09 E-value=63 Score=32.54 Aligned_cols=35 Identities=11% Similarity=0.233 Sum_probs=29.3
Q ss_pred HHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhc
Q 011003 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIE 430 (496)
Q Consensus 396 ~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~ 430 (496)
+..+....+++-..|-.++++.|...|++|+..++
T Consensus 11 i~~aR~vyer~l~~~P~~~~e~~~~iferal~~~p 45 (493)
T 2uy1_A 11 LSSPSAIMEHARRLYMSKDYRSLESLFGRCLKKSY 45 (493)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCC
T ss_pred hHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhccCC
Confidence 44577788888888988999999999999999754
No 347
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=26.63 E-value=88 Score=34.53 Aligned_cols=79 Identities=13% Similarity=0.045 Sum_probs=55.4
Q ss_pred HhhhhhHhcccHHHHHHHHHHHhhhhccCCCCCh--HHHHH------HHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHh
Q 011003 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD--EEKKQ------AKALKVACNLNNAACKLKLKDYKQAEKLCTKKC 475 (496)
Q Consensus 404 ~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~--~~~~~------~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 475 (496)
-+|..+...|++++|..+|++|-.-+........ ++... ........|++.+..+-+.+-|..+++.|..||
T Consensus 845 v~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI 924 (950)
T 4gq2_M 845 LKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLAD 924 (950)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 4677788899999999999998865533222111 11111 122345688999999999999999999999999
Q ss_pred cc-cCCCc
Q 011003 476 ES-SVQKG 482 (496)
Q Consensus 476 ~~-dp~~~ 482 (496)
+. ++++.
T Consensus 925 ~~~~~dd~ 932 (950)
T 4gq2_M 925 ASKETDDE 932 (950)
T ss_dssp HTCCSCCH
T ss_pred hhcccCCc
Confidence 74 44443
No 348
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=26.41 E-value=64 Score=34.17 Aligned_cols=27 Identities=15% Similarity=-0.034 Sum_probs=22.8
Q ss_pred HHhhhHHHHHHHhccCHHHHHHHHHHH
Q 011003 448 VACNLNNAACKLKLKDYKQAEKLCTKK 474 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~~~~Ai~~~~~a 474 (496)
...|.++|..+++.++++.|++++.++
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 457888999999999999999888875
No 349
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=25.46 E-value=91 Score=30.94 Aligned_cols=73 Identities=14% Similarity=0.137 Sum_probs=46.8
Q ss_pred hhhhhHhcccHHHHHHHHHHHhhhhccCCCC--C---hH-HH--HHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhc
Q 011003 405 QGNTLFKAGKYARASKRYEKAVKYIEYDTSF--G---DE-EK--KQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCE 476 (496)
Q Consensus 405 ~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~--~---~~-~~--~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 476 (496)
.++.+.+.++|.+|.-++.....++..+... . .. .. ......+..+|...+..+-+-+.|+.|+..|...+.
T Consensus 41 L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~k~L~~ 120 (436)
T 2yin_A 41 LRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLCKELAE 120 (436)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 4667778999999999997766766543221 0 00 00 111223345566666666778889999999999875
Q ss_pred c
Q 011003 477 S 477 (496)
Q Consensus 477 ~ 477 (496)
.
T Consensus 121 ~ 121 (436)
T 2yin_A 121 Q 121 (436)
T ss_dssp H
T ss_pred H
Confidence 3
No 350
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=24.60 E-value=92 Score=26.05 Aligned_cols=53 Identities=17% Similarity=0.154 Sum_probs=43.6
Q ss_pred ccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHHHHHHhcccCC
Q 011003 413 GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKKCESSVQ 480 (496)
Q Consensus 413 ~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~dp~ 480 (496)
++..+|...|+.|++. + ... +.+|.-.|.--++.++...|.+-..+||.+.|.
T Consensus 74 ~D~d~aR~vy~~a~~~-h-------------KkF-AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k 126 (161)
T 4h7y_A 74 QEPDDARDYFQMARAN-C-------------KKF-AFVHISFAQFELSQGNVKKSKQLLQKAVERGAV 126 (161)
T ss_dssp HCGGGCHHHHHHHHHH-C-------------TTB-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred cCHHHHHHHHHHHHHH-h-------------HHH-HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCC
Confidence 6778888888888885 1 111 788888888888999999999999999998774
No 351
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=24.23 E-value=1.2e+02 Score=33.00 Aligned_cols=59 Identities=25% Similarity=0.442 Sum_probs=46.7
Q ss_pred CCCCCCCEEEEEEEEEEc-CCC-------------------------------EEEeecCCCccEEEEeCCCcccHHHHH
Q 011003 51 DTPENGDEVEVHYTGTLL-DGT-------------------------------QFDSSRDRSTPFKFTLGQGNVIKGWDI 98 (496)
Q Consensus 51 ~~~~~gd~V~v~Y~~~~~-dg~-------------------------------~~~~t~~~~~p~~~~~G~~~~~~gle~ 98 (496)
..+..|+.|.|.|++.+. +|. .+++. .-+.|.+|.+.+.+-++.
T Consensus 559 ~~i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~----~e~~fe~g~g~~~~~le~ 634 (950)
T 3htx_A 559 QSITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESN----EEIEFEVGTGSMNPHIES 634 (950)
T ss_dssp -CCCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEE----EEEEEEETTTCBCHHHHH
T ss_pred eccCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhccccc----HHHHHHHhcCCccchhhh
Confidence 356899999999999875 331 22222 458899999999999999
Q ss_pred HHccCcCCcEEEEEe
Q 011003 99 GIKTMKKGENAVFTI 113 (496)
Q Consensus 99 ~l~~m~~Ge~~~i~i 113 (496)
.+..|.+|+...|..
T Consensus 635 vV~qms~gqT~~F~~ 649 (950)
T 3htx_A 635 EVTQMTVGEYASFKM 649 (950)
T ss_dssp HHTTCCTTCEEEEEE
T ss_pred eeeeccccceeEEec
Confidence 999999999888873
No 352
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=24.16 E-value=1e+02 Score=22.73 Aligned_cols=28 Identities=21% Similarity=0.036 Sum_probs=16.6
Q ss_pred HhhhHHHHHHHhccCHHHHHHHHHHHhc
Q 011003 449 ACNLNNAACKLKLKDYKQAEKLCTKKCE 476 (496)
Q Consensus 449 ~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 476 (496)
.-+..+|.-.-+.++|.+|+..+..+|+
T Consensus 17 ~~lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 17 ATVLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3344555555566777666666666554
No 353
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=24.03 E-value=98 Score=25.90 Aligned_cols=87 Identities=11% Similarity=0.027 Sum_probs=56.3
Q ss_pred ChHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhHHHHHHHhccCHHHHHHH
Q 011003 391 NTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKL 470 (496)
Q Consensus 391 ~~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~ 470 (496)
+.+.-+..+..+...|+..-- +-..+-+..|++|+.-++-.. .......+-++.+-|.- ..+++.++|.+.
T Consensus 12 ~yd~W~~yl~llE~~g~p~~d-~~l~rlrd~YerAia~~Pp~k-------~~~wrrYI~LWIrYA~~-~ei~D~d~aR~v 82 (161)
T 4h7y_A 12 NPEDWLSLLLKLEKNSVPLSD-ALLNKLIGRYSQAIEALPPDK-------YGQNESFARIQVRFAEL-KAIQEPDDARDY 82 (161)
T ss_dssp SHHHHHHHHHHHHHHTCSCCH-HHHHHHHHHHHHHHHHSCGGG-------GTTCHHHHHHHHHHHHH-HHHHCGGGCHHH
T ss_pred CHHHHHHHHHHHHHcCCCchh-hHHHHHHHHHHHHHHcCCccc-------cccHHHHHHHHHHHHHH-HHhcCHHHHHHH
Confidence 344555555555555665333 334677789999998765431 22245567777777744 677999999999
Q ss_pred HHHHhcccCCCcchhc
Q 011003 471 CTKKCESSVQKGSGIH 486 (496)
Q Consensus 471 ~~~al~~dp~~~Ka~~ 486 (496)
+..|+++...-+|.|.
T Consensus 83 y~~a~~~hKkFAKiwi 98 (161)
T 4h7y_A 83 FQMARANCKKFAFVHI 98 (161)
T ss_dssp HHHHHHHCTTBHHHHH
T ss_pred HHHHHHHhHHHHHHHH
Confidence 9999987444444443
No 354
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=23.06 E-value=1.1e+02 Score=20.45 Aligned_cols=39 Identities=18% Similarity=0.204 Sum_probs=31.2
Q ss_pred ChHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhh
Q 011003 391 NTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYI 429 (496)
Q Consensus 391 ~~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~ 429 (496)
+..+.+..|.++-.-+.....=.+..-|++..++||++|
T Consensus 12 ~~~~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL 50 (53)
T 2rkl_A 12 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLL 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHH
Confidence 345667778888888888888888899999999988875
No 355
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=21.03 E-value=1.1e+02 Score=30.61 Aligned_cols=30 Identities=17% Similarity=0.004 Sum_probs=24.8
Q ss_pred HHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 448 VACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
..++.=+|.+||-+++|.+|+..|+++|..
T Consensus 191 ~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 191 DVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 445556788888899999999999999963
No 356
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=20.70 E-value=1.3e+02 Score=24.73 Aligned_cols=41 Identities=12% Similarity=0.139 Sum_probs=36.0
Q ss_pred ccChHHHHHHHhhhHHhhhhhHhcccHHHHHHHHHHHhhhh
Q 011003 389 DMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYI 429 (496)
Q Consensus 389 ~~~~~e~~~~a~~~k~~Gn~~fk~~~y~~A~~~Y~~al~~~ 429 (496)
..+...-+..+..+..+|..+...|+++.|.-.|-+.+.++
T Consensus 30 ~i~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~ 70 (146)
T 2xze_A 30 DIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLF 70 (146)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 34566778999999999999999999999999999988776
No 357
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=20.68 E-value=87 Score=31.57 Aligned_cols=30 Identities=10% Similarity=-0.022 Sum_probs=24.6
Q ss_pred HHhhhHHHHHHHhccCHHHHHHHHHHHhcc
Q 011003 448 VACNLNNAACKLKLKDYKQAEKLCTKKCES 477 (496)
Q Consensus 448 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~~ 477 (496)
..++.=+|.+||-+++|.+|+..|+++|..
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 445556788888899999999999999864
No 358
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=20.30 E-value=2.9e+02 Score=21.81 Aligned_cols=33 Identities=3% Similarity=0.113 Sum_probs=23.2
Q ss_pred CCCEEEEEEEEEEcCCCEEEeecCCCccEEEEe
Q 011003 55 NGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTL 87 (496)
Q Consensus 55 ~gd~V~v~Y~~~~~dg~~~~~t~~~~~p~~~~~ 87 (496)
.|+.+.+.++..+.....+.-++..++-+.|.+
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v 48 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVV 48 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEE
Confidence 556788888888866555655666666777776
No 359
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=20.21 E-value=85 Score=31.52 Aligned_cols=28 Identities=7% Similarity=0.011 Sum_probs=22.9
Q ss_pred HhhhHHHHHHHhccCHHHHHHHHHHHhc
Q 011003 449 ACNLNNAACKLKLKDYKQAEKLCTKKCE 476 (496)
Q Consensus 449 ~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 476 (496)
.++.=+|.+||-+++|.+|+..|++++.
T Consensus 181 aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 181 AAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3444577788889999999999999985
No 360
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=20.16 E-value=1.2e+02 Score=22.33 Aligned_cols=26 Identities=23% Similarity=-0.028 Sum_probs=16.0
Q ss_pred hhHHHHHHHhccCHHHHHHHHHHHhc
Q 011003 451 NLNNAACKLKLKDYKQAEKLCTKKCE 476 (496)
Q Consensus 451 ~~N~a~~~~kl~~~~~Ai~~~~~al~ 476 (496)
+..+|.-.=+.|+|.+|+..+.++|+
T Consensus 22 lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 22 YAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 34455555567777777776666654
Done!